Query 010851
Match_columns 499
No_of_seqs 451 out of 4187
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:17:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010851.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010851hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 5.2E-37 1.1E-41 259.9 10.7 175 10-191 30-207 (226)
2 PHA02791 ankyrin-like protein; 100.0 2.3E-33 5E-38 269.8 20.3 208 8-236 21-231 (284)
3 KOG4412 26S proteasome regulat 100.0 5.6E-34 1.2E-38 241.5 13.3 207 17-240 3-213 (226)
4 PHA02716 CPXV016; CPX019; EVM0 100.0 2.2E-32 4.8E-37 290.1 21.3 180 8-193 167-404 (764)
5 PHA02874 ankyrin repeat protei 100.0 1.2E-31 2.5E-36 277.5 23.5 219 9-245 27-268 (434)
6 PHA02878 ankyrin repeat protei 100.0 1.4E-31 3E-36 280.2 22.8 211 13-241 33-310 (477)
7 PHA02946 ankyin-like protein; 100.0 3.5E-31 7.6E-36 272.5 20.4 190 6-201 61-255 (446)
8 PHA03095 ankyrin-like protein; 100.0 2.6E-31 5.7E-36 278.2 19.8 187 7-199 37-233 (471)
9 PHA02874 ankyrin repeat protei 100.0 1.3E-30 2.9E-35 269.6 23.8 219 6-242 57-299 (434)
10 PHA02791 ankyrin-like protein; 100.0 1.1E-30 2.4E-35 251.1 20.2 164 16-187 60-226 (284)
11 PHA03100 ankyrin repeat protei 100.0 1.2E-30 2.6E-35 273.8 21.9 217 8-240 59-292 (480)
12 PHA02875 ankyrin repeat protei 100.0 1.9E-30 4E-35 267.1 22.2 221 6-239 24-246 (413)
13 KOG0509 Ankyrin repeat and DHH 100.0 5.4E-31 1.2E-35 263.8 15.9 209 18-241 45-255 (600)
14 PHA02946 ankyin-like protein; 100.0 1.3E-30 2.9E-35 268.2 19.1 210 17-244 37-255 (446)
15 KOG0509 Ankyrin repeat and DHH 100.0 2.7E-31 5.9E-36 265.9 13.0 186 7-198 68-255 (600)
16 PHA03100 ankyrin repeat protei 100.0 2.3E-30 4.9E-35 271.8 19.9 217 10-242 28-261 (480)
17 PHA02876 ankyrin repeat protei 100.0 7.4E-30 1.6E-34 278.4 24.1 231 6-242 167-453 (682)
18 PHA02859 ankyrin repeat protei 100.0 7.5E-30 1.6E-34 236.7 19.7 162 14-181 18-185 (209)
19 PHA02875 ankyrin repeat protei 100.0 1.7E-29 3.7E-34 259.9 22.3 209 17-241 2-212 (413)
20 PHA02989 ankyrin repeat protei 100.0 8.4E-30 1.8E-34 267.6 19.4 229 6-241 25-299 (494)
21 PHA02876 ankyrin repeat protei 100.0 3.9E-29 8.5E-34 272.7 23.2 227 7-249 263-493 (682)
22 PHA02878 ankyrin repeat protei 100.0 4.4E-29 9.6E-34 261.2 20.0 185 6-198 59-310 (477)
23 PHA02798 ankyrin-like protein; 100.0 2.1E-28 4.6E-33 256.6 20.9 223 15-242 34-302 (489)
24 PHA03095 ankyrin-like protein; 100.0 2.5E-27 5.3E-32 248.2 21.7 222 6-242 72-301 (471)
25 KOG0510 Ankyrin repeat protein 100.0 7.3E-28 1.6E-32 245.6 16.6 226 7-244 111-354 (929)
26 KOG0510 Ankyrin repeat protein 100.0 1.7E-27 3.6E-32 243.0 18.2 236 7-255 144-402 (929)
27 PHA02716 CPXV016; CPX019; EVM0 100.0 3.9E-27 8.3E-32 250.3 21.7 197 26-237 151-405 (764)
28 PHA02989 ankyrin repeat protei 99.9 8.5E-27 1.8E-31 244.9 19.9 199 7-209 60-310 (494)
29 PHA02859 ankyrin repeat protei 99.9 1.2E-26 2.7E-31 215.1 17.6 151 10-165 44-202 (209)
30 PHA02795 ankyrin-like protein; 99.9 1.6E-26 3.6E-31 230.5 18.6 169 12-186 111-293 (437)
31 PHA02917 ankyrin-like protein; 99.9 9.6E-27 2.1E-31 248.7 16.8 219 6-239 21-275 (661)
32 PHA02798 ankyrin-like protein; 99.9 2.2E-26 4.8E-31 241.4 19.2 200 6-208 60-311 (489)
33 KOG0508 Ankyrin repeat protein 99.9 2.9E-27 6.3E-32 227.6 11.2 188 14-208 39-235 (615)
34 KOG0508 Ankyrin repeat protein 99.9 7.3E-27 1.6E-31 224.8 12.0 159 13-178 80-238 (615)
35 KOG0514 Ankyrin repeat protein 99.9 4.8E-27 1E-31 219.5 9.8 172 1-177 252-429 (452)
36 PHA02795 ankyrin-like protein; 99.9 8E-26 1.7E-30 225.6 17.4 175 7-194 72-260 (437)
37 PLN03192 Voltage-dependent pot 99.9 3.8E-25 8.3E-30 244.8 19.5 167 13-187 521-687 (823)
38 PHA02730 ankyrin-like protein; 99.9 8.6E-25 1.9E-29 228.2 17.7 198 9-209 32-258 (672)
39 KOG4177 Ankyrin [Cell wall/mem 99.9 7E-25 1.5E-29 237.2 13.6 230 7-247 430-660 (1143)
40 PHA02792 ankyrin-like protein; 99.9 2.8E-24 6.1E-29 222.1 17.4 105 123-240 343-452 (631)
41 PHA02743 Viral ankyrin protein 99.9 2.9E-24 6.3E-29 191.9 14.9 148 3-155 6-162 (166)
42 PHA02917 ankyrin-like protein; 99.9 5.1E-24 1.1E-28 227.8 18.7 208 30-243 12-241 (661)
43 PHA02730 ankyrin-like protein; 99.9 1.2E-23 2.7E-28 219.6 19.4 212 13-240 192-505 (672)
44 KOG4177 Ankyrin [Cell wall/mem 99.9 8.4E-25 1.8E-29 236.6 9.5 219 6-240 396-615 (1143)
45 KOG0502 Integral membrane anky 99.9 1.6E-24 3.5E-29 189.5 9.0 182 9-198 88-269 (296)
46 KOG0502 Integral membrane anky 99.9 2.3E-24 4.9E-29 188.5 7.5 169 6-183 118-286 (296)
47 PHA02741 hypothetical protein; 99.9 3.1E-23 6.7E-28 186.1 14.2 132 10-144 14-157 (169)
48 PHA02884 ankyrin repeat protei 99.9 6.3E-23 1.4E-27 197.4 16.9 157 10-179 25-186 (300)
49 KOG0507 CASK-interacting adapt 99.9 1.3E-23 2.8E-28 213.2 12.1 219 7-240 39-263 (854)
50 PHA02743 Viral ankyrin protein 99.9 4.1E-23 8.8E-28 184.5 14.0 143 39-187 9-160 (166)
51 PLN03192 Voltage-dependent pot 99.9 8.9E-23 1.9E-27 226.1 17.5 149 6-162 547-696 (823)
52 TIGR00870 trp transient-recept 99.9 1.8E-22 4E-27 222.2 15.6 216 15-242 15-268 (743)
53 PHA02741 hypothetical protein; 99.9 4.8E-22 1E-26 178.3 14.9 140 30-181 7-158 (169)
54 PHA02792 ankyrin-like protein; 99.9 9.8E-22 2.1E-26 203.3 17.9 181 9-197 167-452 (631)
55 PHA02736 Viral ankyrin protein 99.9 2.6E-22 5.6E-27 177.4 11.1 132 10-146 10-153 (154)
56 KOG0505 Myosin phosphatase, re 99.9 3.6E-22 7.8E-27 196.5 11.9 187 8-200 64-276 (527)
57 TIGR00870 trp transient-recept 99.9 2.5E-21 5.3E-26 213.3 15.9 197 7-210 42-279 (743)
58 PHA02736 Viral ankyrin protein 99.9 2.5E-21 5.4E-26 171.1 10.9 132 43-182 10-153 (154)
59 KOG0512 Fetal globin-inducing 99.9 1.2E-20 2.6E-25 159.4 13.7 143 18-166 64-209 (228)
60 KOG0505 Myosin phosphatase, re 99.8 3.5E-21 7.7E-26 189.5 10.6 153 6-163 95-272 (527)
61 KOG0514 Ankyrin repeat protein 99.8 6.9E-21 1.5E-25 178.5 11.1 155 43-246 261-422 (452)
62 PHA02884 ankyrin repeat protei 99.8 4.8E-20 1E-24 177.5 15.8 132 43-177 25-159 (300)
63 KOG0195 Integrin-linked kinase 99.8 7.1E-20 1.5E-24 166.6 9.5 116 9-127 26-141 (448)
64 KOG0195 Integrin-linked kinase 99.8 4.4E-20 9.6E-25 167.9 7.3 159 22-186 5-164 (448)
65 KOG0507 CASK-interacting adapt 99.8 1.6E-19 3.6E-24 183.6 9.2 178 11-195 76-261 (854)
66 KOG0512 Fetal globin-inducing 99.8 1.6E-18 3.5E-23 146.6 11.7 143 53-201 66-211 (228)
67 PF12796 Ank_2: Ankyrin repeat 99.8 1.5E-18 3.3E-23 138.2 11.1 89 21-116 1-89 (89)
68 cd00204 ANK ankyrin repeats; 99.8 7.1E-18 1.5E-22 142.4 14.9 125 12-139 2-126 (126)
69 KOG4369 RTK signaling protein 99.8 6.6E-19 1.4E-23 184.0 8.2 228 14-254 754-983 (2131)
70 KOG4369 RTK signaling protein 99.8 1.2E-18 2.6E-23 182.1 8.3 222 5-240 778-1036(2131)
71 cd00204 ANK ankyrin repeats; 99.7 6.1E-17 1.3E-21 136.7 15.2 125 45-175 2-126 (126)
72 PF12796 Ank_2: Ankyrin repeat 99.7 2E-17 4.2E-22 131.8 11.1 86 54-146 1-86 (89)
73 KOG3676 Ca2+-permeable cation 99.7 5.8E-17 1.3E-21 167.4 14.2 166 9-178 135-331 (782)
74 COG0666 Arp FOG: Ankyrin repea 99.7 1E-15 2.2E-20 143.4 13.7 129 44-178 67-203 (235)
75 KOG4214 Myotrophin and similar 99.6 6.1E-16 1.3E-20 117.2 8.7 103 18-124 3-105 (117)
76 KOG3676 Ca2+-permeable cation 99.6 1.7E-15 3.7E-20 156.7 11.9 125 14-141 181-330 (782)
77 COG0666 Arp FOG: Ankyrin repea 99.6 1.5E-14 3.3E-19 135.3 15.7 132 8-142 64-203 (235)
78 KOG4214 Myotrophin and similar 99.6 6.3E-15 1.4E-19 111.7 8.4 102 52-159 4-105 (117)
79 KOG1710 MYND Zn-finger and ank 99.6 2.5E-14 5.5E-19 130.6 11.4 124 16-141 11-134 (396)
80 PTZ00322 6-phosphofructo-2-kin 99.5 3.6E-14 7.8E-19 153.2 12.4 106 19-127 84-196 (664)
81 PTZ00322 6-phosphofructo-2-kin 99.5 4.4E-14 9.5E-19 152.6 12.3 102 53-159 85-193 (664)
82 KOG4172 Predicted E3 ubiquitin 99.5 3.8E-15 8.3E-20 99.5 -1.4 54 446-499 8-62 (62)
83 KOG0515 p53-interacting protei 99.5 2.4E-13 5.2E-18 133.4 10.3 116 57-176 557-673 (752)
84 PF13857 Ank_5: Ankyrin repeat 99.5 7E-14 1.5E-18 100.4 4.7 54 37-93 2-56 (56)
85 PF13857 Ank_5: Ankyrin repeat 99.5 7.6E-14 1.6E-18 100.2 4.7 55 70-126 1-56 (56)
86 PF13637 Ank_4: Ankyrin repeat 99.4 2.1E-13 4.5E-18 97.3 6.0 54 17-71 1-54 (54)
87 KOG0515 p53-interacting protei 99.4 5.8E-13 1.3E-17 130.8 9.9 122 16-140 549-673 (752)
88 PF13637 Ank_4: Ankyrin repeat 99.4 4.6E-13 1E-17 95.5 6.8 53 86-138 1-53 (54)
89 KOG1710 MYND Zn-finger and ank 99.4 1.2E-12 2.6E-17 119.8 10.8 119 50-174 12-131 (396)
90 PF13920 zf-C3HC4_3: Zinc fing 99.2 8.5E-12 1.8E-16 87.1 3.1 49 445-493 2-50 (50)
91 KOG4275 Predicted E3 ubiquitin 99.0 2.3E-11 4.9E-16 111.2 -1.6 51 445-499 300-350 (350)
92 KOG4265 Predicted E3 ubiquitin 99.0 1.3E-10 2.7E-15 110.7 2.8 56 443-498 288-343 (349)
93 KOG0783 Uncharacterized conser 98.9 6.8E-10 1.5E-14 114.8 3.9 95 32-128 32-128 (1267)
94 KOG0506 Glutaminase (contains 98.9 1.3E-09 2.8E-14 106.3 5.6 90 16-108 505-595 (622)
95 KOG0818 GTPase-activating prot 98.9 6.2E-09 1.4E-13 102.1 9.9 101 43-145 120-226 (669)
96 KOG0818 GTPase-activating prot 98.9 6.5E-09 1.4E-13 101.9 9.9 94 12-108 122-222 (669)
97 PLN03208 E3 ubiquitin-protein 98.9 1.9E-09 4.2E-14 95.0 5.4 55 442-497 15-87 (193)
98 KOG0823 Predicted E3 ubiquitin 98.9 1.5E-09 3.3E-14 97.2 4.3 55 442-497 44-103 (230)
99 KOG0317 Predicted E3 ubiquitin 98.8 1.9E-09 4.1E-14 99.5 3.9 48 444-492 238-285 (293)
100 KOG0783 Uncharacterized conser 98.8 2.7E-09 5.8E-14 110.5 3.5 83 10-95 45-128 (1267)
101 KOG0782 Predicted diacylglycer 98.8 2.6E-08 5.5E-13 99.2 9.6 118 21-141 870-989 (1004)
102 KOG0705 GTPase-activating prot 98.7 2.8E-08 6E-13 99.4 8.2 60 84-143 659-718 (749)
103 KOG0320 Predicted E3 ubiquitin 98.7 2E-08 4.3E-13 86.0 6.0 51 446-497 132-186 (187)
104 PF13606 Ank_3: Ankyrin repeat 98.7 2.3E-08 4.9E-13 61.3 4.0 28 50-78 2-29 (30)
105 PF13923 zf-C3HC4_2: Zinc fing 98.7 9.6E-09 2.1E-13 67.4 2.4 38 448-486 1-39 (39)
106 PF13606 Ank_3: Ankyrin repeat 98.7 2.3E-08 5.1E-13 61.2 3.9 28 86-113 2-29 (30)
107 PF15227 zf-C3HC4_4: zinc fing 98.7 1.1E-08 2.5E-13 67.9 2.7 38 448-486 1-42 (42)
108 PHA02929 N1R/p28-like protein; 98.7 1.5E-08 3.2E-13 93.6 4.2 52 445-497 174-233 (238)
109 KOG0522 Ankyrin repeat protein 98.7 5E-08 1.1E-12 97.1 8.0 86 20-108 23-110 (560)
110 KOG1571 Predicted E3 ubiquitin 98.7 6.1E-09 1.3E-13 99.3 1.5 54 442-499 302-355 (355)
111 KOG0506 Glutaminase (contains 98.7 2.4E-08 5.3E-13 97.6 5.4 93 48-143 504-597 (622)
112 PF00023 Ank: Ankyrin repeat H 98.7 3.8E-08 8.2E-13 62.1 4.4 30 50-80 2-31 (33)
113 KOG0782 Predicted diacylglycer 98.7 5.2E-08 1.1E-12 97.0 7.5 98 8-108 890-989 (1004)
114 PF13639 zf-RING_2: Ring finge 98.6 1.2E-08 2.5E-13 69.1 1.8 40 447-487 2-44 (44)
115 PF00023 Ank: Ankyrin repeat H 98.6 4.3E-08 9.4E-13 61.8 3.8 33 16-48 1-33 (33)
116 KOG0522 Ankyrin repeat protein 98.6 1E-07 2.3E-12 94.9 7.6 89 52-142 22-111 (560)
117 KOG3609 Receptor-activated Ca2 98.6 2E-07 4.3E-12 98.1 9.9 123 14-146 22-158 (822)
118 KOG0705 GTPase-activating prot 98.6 1.5E-07 3.2E-12 94.3 8.3 92 88-182 626-721 (749)
119 PHA02926 zinc finger-like prot 98.4 1.1E-07 2.3E-12 84.7 2.9 50 445-495 170-234 (242)
120 PF14634 zf-RING_5: zinc-RING 98.4 3.4E-07 7.4E-12 61.7 3.2 41 447-488 1-44 (44)
121 KOG0521 Putative GTPase activa 98.3 5.6E-07 1.2E-11 97.4 6.2 88 84-174 654-741 (785)
122 PF00097 zf-C3HC4: Zinc finger 98.3 2.8E-07 6.1E-12 61.3 2.4 38 448-486 1-41 (41)
123 KOG0521 Putative GTPase activa 98.3 3.1E-07 6.7E-12 99.4 3.6 100 38-140 642-743 (785)
124 cd00162 RING RING-finger (Real 98.3 4.7E-07 1E-11 61.3 3.0 43 447-490 1-45 (45)
125 KOG3609 Receptor-activated Ca2 98.3 2.7E-06 5.8E-11 89.8 9.4 127 48-185 23-161 (822)
126 KOG2384 Major histocompatibili 98.3 3.1E-06 6.7E-11 73.7 8.0 96 74-179 2-98 (223)
127 KOG0520 Uncharacterized conser 98.2 1.2E-06 2.7E-11 94.2 5.8 125 13-141 570-702 (975)
128 TIGR00599 rad18 DNA repair pro 98.2 6.6E-07 1.4E-11 88.9 3.0 50 442-492 23-72 (397)
129 PF13445 zf-RING_UBOX: RING-ty 98.2 6.7E-07 1.4E-11 59.3 2.0 30 448-479 1-34 (43)
130 smart00184 RING Ring finger. E 98.2 1.5E-06 3.3E-11 56.6 3.4 38 448-486 1-39 (39)
131 smart00504 Ubox Modified RING 98.2 1.3E-06 2.8E-11 64.2 3.3 45 446-491 2-46 (63)
132 COG5574 PEX10 RING-finger-cont 98.2 8.2E-07 1.8E-11 81.2 2.5 45 446-491 216-262 (271)
133 KOG2384 Major histocompatibili 98.1 9.9E-06 2.1E-10 70.6 6.4 64 9-73 4-68 (223)
134 KOG2164 Predicted E3 ubiquitin 98.0 2.4E-06 5.1E-11 85.4 2.9 52 445-497 186-244 (513)
135 KOG0287 Postreplication repair 98.0 1.9E-06 4.1E-11 81.0 1.7 47 445-492 23-69 (442)
136 KOG0520 Uncharacterized conser 98.0 6.1E-06 1.3E-10 89.0 5.2 128 45-177 569-702 (975)
137 PF12678 zf-rbx1: RING-H2 zinc 98.0 6.6E-06 1.4E-10 62.1 3.3 41 446-487 20-73 (73)
138 KOG0511 Ankyrin repeat protein 98.0 2.1E-05 4.5E-10 75.5 7.3 56 54-112 40-95 (516)
139 COG5432 RAD18 RING-finger-cont 98.0 3.5E-06 7.6E-11 77.5 2.1 46 446-492 26-71 (391)
140 KOG0511 Ankyrin repeat protein 97.9 3E-05 6.6E-10 74.4 7.4 76 18-97 37-112 (516)
141 KOG0978 E3 ubiquitin ligase in 97.9 2.7E-06 5.8E-11 89.3 0.0 52 445-497 643-697 (698)
142 COG5540 RING-finger-containing 97.8 9.1E-06 2E-10 75.5 2.0 49 442-491 320-372 (374)
143 KOG1100 Predicted E3 ubiquitin 97.8 7E-06 1.5E-10 74.9 0.8 48 447-498 160-207 (207)
144 KOG0824 Predicted E3 ubiquitin 97.7 1E-05 2.2E-10 75.3 1.4 48 446-494 8-56 (324)
145 KOG1785 Tyrosine kinase negati 97.7 1.2E-05 2.7E-10 77.2 1.8 48 446-494 370-419 (563)
146 COG5243 HRD1 HRD ubiquitin lig 97.6 2.4E-05 5.2E-10 74.7 2.1 44 446-490 288-344 (491)
147 KOG4692 Predicted E3 ubiquitin 97.6 2.9E-05 6.4E-10 73.5 2.3 51 443-494 420-470 (489)
148 KOG4628 Predicted E3 ubiquitin 97.6 4.1E-05 8.8E-10 74.3 3.0 46 446-492 230-279 (348)
149 PF04564 U-box: U-box domain; 97.5 0.0001 2.2E-09 55.7 3.5 48 444-492 3-51 (73)
150 KOG2177 Predicted E3 ubiquitin 97.4 5E-05 1.1E-09 75.4 1.5 45 443-488 11-55 (386)
151 COG5236 Uncharacterized conser 97.4 0.00014 3E-09 68.8 4.0 57 437-494 53-111 (493)
152 PF14835 zf-RING_6: zf-RING of 97.2 9.1E-05 2E-09 52.8 -0.1 43 446-491 8-51 (65)
153 PF12861 zf-Apc11: Anaphase-pr 97.1 0.00044 9.5E-09 52.7 3.4 32 459-491 48-82 (85)
154 KOG0311 Predicted E3 ubiquitin 97.1 7.2E-05 1.6E-09 71.4 -1.6 51 443-494 41-93 (381)
155 KOG0802 E3 ubiquitin ligase [P 97.1 0.00023 4.9E-09 75.6 1.8 46 445-491 291-341 (543)
156 KOG4159 Predicted E3 ubiquitin 97.0 0.00035 7.6E-09 69.8 2.3 49 443-492 82-130 (398)
157 PF14447 Prok-RING_4: Prokaryo 96.9 0.00025 5.4E-09 48.8 0.5 44 445-491 7-50 (55)
158 KOG1039 Predicted E3 ubiquitin 96.9 0.0004 8.8E-09 67.9 1.9 49 445-494 161-224 (344)
159 smart00248 ANK ankyrin repeats 96.7 0.0029 6.4E-08 37.0 4.1 22 88-109 4-25 (30)
160 smart00248 ANK ankyrin repeats 96.7 0.003 6.4E-08 37.0 4.0 27 50-77 2-28 (30)
161 KOG2505 Ankyrin repeat protein 96.6 0.0037 8.1E-08 62.6 5.6 64 64-127 404-471 (591)
162 KOG2879 Predicted E3 ubiquitin 96.5 0.0022 4.9E-08 59.3 3.6 46 445-491 239-287 (298)
163 TIGR00570 cdk7 CDK-activating 96.5 0.0022 4.8E-08 61.5 3.4 30 462-492 25-55 (309)
164 KOG2505 Ankyrin repeat protein 96.4 0.0066 1.4E-07 60.9 6.3 62 99-163 404-471 (591)
165 COG5152 Uncharacterized conser 96.4 0.0015 3.3E-08 57.1 1.3 48 446-494 197-244 (259)
166 PF14570 zf-RING_4: RING/Ubox 96.1 0.0034 7.3E-08 42.4 1.5 42 448-490 1-47 (48)
167 KOG1813 Predicted E3 ubiquitin 96.0 0.0021 4.5E-08 60.2 0.6 48 446-494 242-289 (313)
168 KOG0828 Predicted E3 ubiquitin 95.8 0.0041 8.8E-08 62.0 1.5 48 443-491 569-634 (636)
169 KOG0825 PHD Zn-finger protein 95.6 0.0032 6.9E-08 66.1 -0.2 52 444-496 122-176 (1134)
170 COG5175 MOT2 Transcriptional r 95.5 0.0085 1.9E-07 56.9 2.5 46 445-491 14-64 (480)
171 KOG3002 Zn finger protein [Gen 95.3 0.0083 1.8E-07 57.9 1.8 45 443-492 46-92 (299)
172 KOG1734 Predicted RING-contain 95.2 0.0087 1.9E-07 55.2 1.4 45 446-491 225-281 (328)
173 PF07800 DUF1644: Protein of u 95.1 0.022 4.8E-07 48.6 3.5 51 446-496 3-96 (162)
174 KOG0804 Cytoplasmic Zn-finger 95.0 0.017 3.8E-07 57.2 2.8 41 446-489 176-220 (493)
175 KOG3039 Uncharacterized conser 94.8 0.022 4.8E-07 51.8 2.8 48 444-492 220-271 (303)
176 PF03158 DUF249: Multigene fam 94.7 0.27 5.9E-06 43.4 9.1 139 18-176 47-191 (192)
177 KOG0297 TNF receptor-associate 94.3 0.016 3.6E-07 58.7 1.0 48 444-492 20-68 (391)
178 PF04641 Rtf2: Rtf2 RING-finge 94.2 0.05 1.1E-06 52.1 4.0 52 443-496 111-168 (260)
179 KOG3579 Predicted E3 ubiquitin 94.0 0.096 2.1E-06 48.8 5.2 31 446-477 269-303 (352)
180 KOG1001 Helicase-like transcri 94.0 0.027 5.8E-07 60.8 1.8 44 446-491 455-500 (674)
181 smart00744 RINGv The RING-vari 93.9 0.067 1.5E-06 36.7 3.0 40 447-487 1-49 (49)
182 KOG1002 Nucleotide excision re 93.8 0.025 5.3E-07 57.1 1.1 49 441-490 532-585 (791)
183 COG5194 APC11 Component of SCF 93.8 0.069 1.5E-06 39.7 3.1 32 459-491 50-81 (88)
184 PF06128 Shigella_OspC: Shigel 93.8 0.33 7.2E-06 44.2 8.0 50 131-181 229-280 (284)
185 PF05290 Baculo_IE-1: Baculovi 93.5 0.048 1E-06 45.0 2.0 47 446-493 81-134 (140)
186 PF06128 Shigella_OspC: Shigel 93.5 0.29 6.2E-06 44.6 7.1 91 50-144 179-279 (284)
187 KOG2660 Locus-specific chromos 93.1 0.024 5.2E-07 54.2 -0.2 52 444-496 14-66 (331)
188 COG5219 Uncharacterized conser 92.6 0.061 1.3E-06 58.1 1.8 48 443-491 1467-1523(1525)
189 KOG1814 Predicted E3 ubiquitin 92.6 0.073 1.6E-06 52.4 2.2 30 446-476 185-217 (445)
190 PF11789 zf-Nse: Zinc-finger o 92.3 0.11 2.4E-06 36.9 2.3 39 446-485 12-53 (57)
191 COG5220 TFB3 Cdk activating ki 92.0 0.077 1.7E-06 48.2 1.5 44 445-489 10-62 (314)
192 PF03854 zf-P11: P-11 zinc fin 92.0 0.11 2.5E-06 34.5 1.9 46 447-495 4-50 (50)
193 PF05883 Baculo_RING: Baculovi 91.3 0.16 3.4E-06 42.5 2.5 32 446-478 27-67 (134)
194 KOG2932 E3 ubiquitin ligase in 90.8 0.056 1.2E-06 51.0 -0.6 31 459-492 105-135 (389)
195 PF11793 FANCL_C: FANCL C-term 90.0 0.079 1.7E-06 39.5 -0.3 45 446-491 3-66 (70)
196 KOG0826 Predicted E3 ubiquitin 89.5 0.15 3.3E-06 48.7 1.0 53 444-497 299-354 (357)
197 KOG1493 Anaphase-promoting com 89.4 0.13 2.8E-06 38.0 0.4 29 462-491 50-81 (84)
198 PF03158 DUF249: Multigene fam 88.8 2.1 4.6E-05 37.9 7.5 113 16-140 75-191 (192)
199 KOG2113 Predicted RNA binding 88.6 0.48 1E-05 45.0 3.6 53 442-496 340-392 (394)
200 PF11929 DUF3447: Domain of un 87.0 1.5 3.3E-05 33.1 5.0 48 18-73 7-54 (76)
201 KOG1428 Inhibitor of type V ad 86.4 0.42 9E-06 54.2 2.2 48 444-492 3485-3545(3738)
202 COG5222 Uncharacterized conser 85.9 0.42 9.1E-06 45.0 1.6 42 446-488 275-318 (427)
203 PF04710 Pellino: Pellino; In 85.9 0.23 5.1E-06 48.9 0.0 53 445-498 328-411 (416)
204 PF10272 Tmpp129: Putative tra 83.7 1.3 2.7E-05 44.1 3.9 26 465-491 313-351 (358)
205 KOG2817 Predicted E3 ubiquitin 83.5 0.74 1.6E-05 45.5 2.2 40 458-498 350-394 (394)
206 KOG2930 SCF ubiquitin ligase, 83.3 0.87 1.9E-05 35.8 2.1 30 459-489 77-106 (114)
207 PF10367 Vps39_2: Vacuolar sor 83.2 0.46 1E-05 38.6 0.6 30 444-474 77-108 (109)
208 PF11929 DUF3447: Domain of un 82.7 2 4.2E-05 32.5 3.9 46 89-141 9-54 (76)
209 KOG3842 Adaptor protein Pellin 80.4 2 4.3E-05 41.0 3.7 52 444-496 340-422 (429)
210 PHA03096 p28-like protein; Pro 80.1 1.1 2.4E-05 43.1 2.1 44 446-490 179-236 (284)
211 KOG3161 Predicted E3 ubiquitin 79.5 0.8 1.7E-05 47.8 0.9 36 446-484 12-51 (861)
212 PHA02862 5L protein; Provision 78.7 1.9 4.2E-05 36.3 2.8 45 446-491 3-53 (156)
213 KOG2113 Predicted RNA binding 77.3 0.61 1.3E-05 44.3 -0.6 53 444-496 135-188 (394)
214 KOG4362 Transcriptional regula 74.7 0.88 1.9E-05 48.5 -0.3 46 445-491 21-69 (684)
215 PHA02825 LAP/PHD finger-like p 74.6 3.4 7.3E-05 35.7 3.2 46 445-491 8-59 (162)
216 KOG4445 Uncharacterized conser 72.7 1.8 3.9E-05 41.1 1.2 45 446-491 116-186 (368)
217 KOG1941 Acetylcholine receptor 69.3 2 4.3E-05 42.2 0.8 46 444-490 364-415 (518)
218 PF02891 zf-MIZ: MIZ/SP-RING z 68.8 3.1 6.7E-05 28.6 1.4 43 446-489 3-50 (50)
219 KOG4185 Predicted E3 ubiquitin 67.0 3.4 7.3E-05 40.4 1.9 32 458-490 22-54 (296)
220 KOG1952 Transcription factor N 66.5 39 0.00085 37.2 9.6 47 443-490 189-246 (950)
221 PF04216 FdhE: Protein involve 65.8 1.5 3.3E-05 42.7 -0.8 51 446-497 173-228 (290)
222 KOG0298 DEAD box-containing he 64.0 1.9 4.2E-05 48.9 -0.5 45 446-491 1154-1199(1394)
223 KOG2068 MOT2 transcription fac 62.5 4.9 0.00011 39.0 2.0 46 446-492 250-299 (327)
224 PRK03564 formate dehydrogenase 60.6 3.6 7.9E-05 40.1 0.7 44 445-488 187-234 (309)
225 KOG0827 Predicted E3 ubiquitin 60.6 6.2 0.00014 39.0 2.3 28 462-490 25-55 (465)
226 KOG4218 Nuclear hormone recept 60.6 5.7 0.00012 38.5 2.0 16 444-459 14-29 (475)
227 KOG3799 Rab3 effector RIM1 and 59.9 4.4 9.6E-05 33.6 1.0 28 443-476 63-91 (169)
228 KOG2114 Vacuolar assembly/sort 59.7 2.9 6.3E-05 45.4 -0.1 44 446-493 841-885 (933)
229 TIGR01562 FdhE formate dehydro 58.7 3.2 6.9E-05 40.5 -0.0 45 445-489 184-233 (305)
230 KOG4217 Nuclear receptors of t 58.0 1.1E+02 0.0024 31.4 10.4 31 442-478 266-298 (605)
231 KOG1940 Zn-finger protein [Gen 56.4 3.7 8E-05 39.2 0.0 47 446-494 159-209 (276)
232 KOG3899 Uncharacterized conser 54.6 7.7 0.00017 36.7 1.8 28 463-491 325-365 (381)
233 KOG3039 Uncharacterized conser 53.9 9.1 0.0002 35.4 2.1 32 443-475 41-72 (303)
234 COG5183 SSM4 Protein involved 51.4 15 0.00031 40.0 3.3 54 443-497 10-71 (1175)
235 PF08746 zf-RING-like: RING-li 46.8 21 0.00046 23.6 2.5 38 448-486 1-43 (43)
236 KOG3113 Uncharacterized conser 45.5 29 0.00063 32.4 3.9 44 446-492 112-159 (293)
237 PF04423 Rad50_zn_hook: Rad50 44.6 9.5 0.00021 26.6 0.6 12 480-491 20-31 (54)
238 KOG1815 Predicted E3 ubiquitin 43.1 15 0.00033 38.1 2.1 31 446-477 71-102 (444)
239 KOG0825 PHD Zn-finger protein 42.2 14 0.00031 40.0 1.6 46 447-493 101-156 (1134)
240 PF14569 zf-UDP: Zinc-binding 41.8 19 0.00042 27.0 1.8 46 445-491 9-62 (80)
241 PF13240 zinc_ribbon_2: zinc-r 41.8 4.4 9.5E-05 22.8 -1.2 22 469-490 2-23 (23)
242 COG5109 Uncharacterized conser 41.6 16 0.00035 35.1 1.7 39 458-497 352-395 (396)
243 KOG1812 Predicted E3 ubiquitin 41.2 11 0.00024 38.3 0.6 32 446-478 147-182 (384)
244 PF12906 RINGv: RING-variant d 41.0 14 0.0003 25.0 0.9 39 448-486 1-47 (47)
245 cd00350 rubredoxin_like Rubred 41.0 10 0.00022 23.4 0.2 15 481-495 18-32 (33)
246 PLN02436 cellulose synthase A 39.3 18 0.00038 41.1 1.9 46 445-491 36-89 (1094)
247 KOG3053 Uncharacterized conser 37.3 22 0.00048 33.2 1.9 51 441-491 16-82 (293)
248 KOG3268 Predicted E3 ubiquitin 36.8 22 0.00049 31.1 1.7 47 444-491 164-228 (234)
249 PF10083 DUF2321: Uncharacteri 36.8 18 0.00039 31.2 1.1 26 464-493 27-52 (158)
250 PF10571 UPF0547: Uncharacteri 34.4 7.7 0.00017 22.6 -1.0 20 469-488 3-22 (26)
251 PLN02189 cellulose synthase 34.1 25 0.00053 39.9 2.0 46 445-491 34-87 (1040)
252 KOG3842 Adaptor protein Pellin 33.5 21 0.00046 34.3 1.2 41 455-496 314-356 (429)
253 KOG1645 RING-finger-containing 33.3 27 0.00059 34.9 1.9 31 458-489 22-54 (463)
254 PLN02638 cellulose synthase A 31.8 45 0.00097 38.1 3.5 47 444-491 16-70 (1079)
255 COG4306 Uncharacterized protei 31.0 27 0.00059 28.7 1.3 21 469-492 31-51 (160)
256 PF01671 ASFV_360: African swi 29.6 89 0.0019 28.5 4.3 78 23-113 91-169 (215)
257 cd00729 rubredoxin_SM Rubredox 29.5 20 0.00043 22.4 0.2 15 481-495 19-33 (34)
258 PF02318 FYVE_2: FYVE-type zin 28.5 7.1 0.00015 32.3 -2.6 45 444-489 53-103 (118)
259 PF10235 Cript: Microtubule-as 28.4 24 0.00053 27.5 0.6 36 446-491 45-80 (90)
260 KOG1709 Guanidinoacetate methy 27.8 48 0.001 30.6 2.4 40 70-111 1-40 (271)
261 PF07975 C1_4: TFIIH C1-like d 27.6 37 0.00079 23.5 1.2 25 462-487 26-50 (51)
262 PF13248 zf-ribbon_3: zinc-rib 27.3 12 0.00026 21.7 -1.0 21 469-489 5-25 (26)
263 PF05605 zf-Di19: Drought indu 27.2 23 0.00049 24.6 0.2 38 446-491 3-42 (54)
264 KOG0513 Ca2+-independent phosp 26.4 15 0.00032 38.6 -1.3 117 10-132 48-182 (503)
265 PF10764 Gin: Inhibitor of sig 26.3 55 0.0012 22.0 1.9 31 447-479 1-31 (46)
266 KOG2034 Vacuolar sorting prote 24.9 37 0.0008 37.6 1.3 32 445-477 817-850 (911)
267 PF07191 zinc-ribbons_6: zinc- 24.4 5.2 0.00011 29.5 -3.5 40 446-491 2-41 (70)
268 KOG3970 Predicted E3 ubiquitin 24.2 67 0.0015 29.4 2.6 45 446-491 51-105 (299)
269 PLN02400 cellulose synthase 22.3 47 0.001 38.0 1.6 46 445-491 36-89 (1085)
270 KOG3836 HLH transcription fact 21.4 22 0.00048 37.6 -1.1 63 24-89 403-465 (605)
271 COG2093 DNA-directed RNA polym 20.7 34 0.00073 24.5 0.1 21 469-489 7-27 (64)
272 KOG0801 Predicted E3 ubiquitin 20.4 44 0.00095 28.9 0.7 24 442-465 174-200 (205)
273 PF10217 DUF2039: Uncharacteri 20.1 49 0.0011 25.9 0.8 35 446-489 56-90 (92)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-37 Score=259.90 Aligned_cols=175 Identities=25% Similarity=0.242 Sum_probs=163.7
Q ss_pred cccc-CCCchHHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCCC
Q 010851 10 QHQQ-RQSKDELLYQWVIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRG 86 (499)
Q Consensus 10 ~~~~-d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g 86 (499)
.+.+ |.+|+||||||+..|+.++|++|++ .+..+|.+|..||||||+||.. |+.|+|+.|+.. |+++|.. ++.|
T Consensus 30 L~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~-g~~evVk~Ll~r~~advna~--tn~G 106 (226)
T KOG4412|consen 30 LNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN-GNDEVVKELLNRSGADVNAT--TNGG 106 (226)
T ss_pred hhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc-CcHHHHHHHhcCCCCCccee--cCCC
Confidence 3444 4599999999999999999999995 6788999999999999999987 899999999999 9999999 8999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
+|+||||+.+|+.+|+++|+++|+.++++|..|.||||.|+..|..+++++|+..|+.++ .+|++|+|||| .|...+
T Consensus 107 ~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n--~qDk~G~TpL~-~al~e~ 183 (226)
T KOG4412|consen 107 QTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN--TQDKYGFTPLH-HALAEG 183 (226)
T ss_pred cceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCC--cccccCccHHH-HHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999 788889
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccc
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELV 191 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~ 191 (499)
+.++..+|+.+|++.+..+..+ ++
T Consensus 184 ~~d~a~lLV~~gAd~~~edke~-t~ 207 (226)
T KOG4412|consen 184 HPDVAVLLVRAGADTDREDKEG-TA 207 (226)
T ss_pred CchHHHHHHHhccceeeccccC-ch
Confidence 9999999999999998887655 44
No 2
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=269.76 Aligned_cols=208 Identities=15% Similarity=0.146 Sum_probs=183.6
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 87 (499)
.+.+.+|.+|+||||+|+..|+.+++++|+++|++++..+ |+||||+|+.. |+.+++++|+++|++++.+ |..|+
T Consensus 21 ~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~-g~~eiV~lLL~~Gadvn~~--d~~G~ 95 (284)
T PHA02791 21 KDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATL-EDTKIVKILLFSGMDDSQF--DDKGN 95 (284)
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCC
Confidence 3456789999999999999999999999999999988764 78999999997 9999999999999999998 88999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCC-CHHHHHHHcCCHHHHHHHHHccccccccccc-ccCCCHHHHHhhhc
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCGANALVRNDDCH-TALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQL 165 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~Lh~~A~~~ 165 (499)
||||+|+..|+.+++++|+++|++++.++..|+ ||||+|+..|+.++|++|++++.+.. | ..|+|||| +|+..
T Consensus 96 TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~----d~~~g~TpLh-~Aa~~ 170 (284)
T PHA02791 96 TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF----DLAILLSCIH-ITIKN 170 (284)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc----ccccCccHHH-HHHHc
Confidence 999999999999999999999999999998885 89999999999999999999986543 3 35899999 99999
Q ss_pred CCHHHHHHHHhcCCCCCCCCcccccc-cCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhH
Q 010851 166 MSRKIWVVVIPCGTANPSKPLRFELV-IYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYK 236 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~~~-l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~ 236 (499)
|+.+++++|+++|++++.++..+.++ ++.+...+....+..|+.. +..++.+|.+| ++|+
T Consensus 171 g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~----------Ga~in~~~~~~-~~l~ 231 (284)
T PHA02791 171 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKY----------DINIYSVNLEN-VLLD 231 (284)
T ss_pred CCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHC----------CCCCccCcccC-ccCC
Confidence 99999999999999999998888876 8888888887776665533 34478888854 6663
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-34 Score=241.49 Aligned_cols=207 Identities=20% Similarity=0.213 Sum_probs=183.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCC-CCcccCC-CCChHHHHHHHcCCcHHHHHHHH-HcCCCCCccCCCCCCCcHHHHH
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGA-SLEWMDK-EGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~-~g~TpLh~Aa~~~g~~~~v~~Ll-~~ga~~~~~~~d~~g~TpL~~A 93 (499)
+.++.+.++......-|+.|++... .++.++. +|+||||+||.. |+.+++++|+ +.+..+|.+ |..||||||+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~-g~~eiv~fLlsq~nv~~ddk--DdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSF-GHVEIVYFLLSQPNVKPDDK--DDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeec-CchhHHHHHHhcCCCCCCCc--cccCCchhhhh
Confidence 4677888898888899999998765 6777765 999999999998 9999999999 557777766 89999999999
Q ss_pred HHcCCHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 94 AKRGLEPTVRLLLSC-GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
+..|+.++|+.|+.+ |+|+|..+..|.|+||||+..|..+|+++|+++|+.++ .+|..|.|||| -|+..|+.++++
T Consensus 80 ~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~--~kD~~~qtplH-RAAavGklkvie 156 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR--IKDKQGQTPLH-RAAAVGKLKVIE 156 (226)
T ss_pred hhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc--ccccccCchhH-HHHhccchhhHH
Confidence 999999999999999 99999999999999999999999999999999999999 99999999999 999999999999
Q ss_pred HHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 173 VVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 173 ~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+|+..|+..|.++..+.+++|.+.-++.+.....|.. .++++++.|++| |++..+..
T Consensus 157 ~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~----------~gAd~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 157 YLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVR----------AGADTDREDKEG-TALRIACN 213 (226)
T ss_pred HHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHH----------hccceeeccccC-chHHHHHH
Confidence 9999999999999999999999876666554443322 245589999988 99888774
No 4
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.2e-32 Score=290.12 Aligned_cols=180 Identities=16% Similarity=0.133 Sum_probs=158.5
Q ss_pred cCcccc-CCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCc--HHHHHHHHHcCCCCCccCC
Q 010851 8 MNQHQQ-RQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL--INVAKTLIELGANINAYRP 82 (499)
Q Consensus 8 ~~~~~~-d~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~--~~~v~~Ll~~ga~~~~~~~ 82 (499)
+++|.+ |..|.||||+|+. +++.++|++|+++|+++|.+|..|.||||+|+.. |+ .++|++|+++|+++|.+
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~-g~~~~eIVklLLe~GADVN~k-- 243 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLIT-GNVCASVIKKIIELGGDMDMK-- 243 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCCCHHHHHHHHHcCCCCCCC--
Confidence 677887 8899999999875 4678999999999999999999999999999987 64 58999999999999998
Q ss_pred CCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 010851 83 GGRGGTPLHHA-------------------------------------AKRGLEPTVRLLLSCGANALVRNDDCHTALGV 125 (499)
Q Consensus 83 d~~g~TpL~~A-------------------------------------~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~ 125 (499)
|..|+||||+| +..|+.+++++|+++|++++.+|..|+||||+
T Consensus 244 D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~ 323 (764)
T PHA02716 244 CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQ 323 (764)
T ss_pred CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHH
Confidence 88999999975 34578889999999999999999999999999
Q ss_pred HHH--cCCHHHHHHHHHcccccccccccccCCCHHHHHhhh--------------cCCHHHHHHHHhcCCCCCCCCcccc
Q 010851 126 ARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ--------------LMSRKIWVVVIPCGTANPSKPLRFE 189 (499)
Q Consensus 126 A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~--------------~~~~~~~~~Ll~~ga~~~~~~~~~~ 189 (499)
|+. .++.+++++|+++|++++ .+|..|+|||| +|+. .++.+++++|+++|++++.++..+.
T Consensus 324 Aaa~~~~~~eIVklLLe~GADIN--~kD~~G~TPLH-~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~ 400 (764)
T PHA02716 324 YILRHNISTDIIKLLHEYGNDLN--EPDNIGNTVLH-TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGY 400 (764)
T ss_pred HHHHhCCCchHHHHHHHcCCCCc--cCCCCCCCHHH-HHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCC
Confidence 764 467899999999999998 89999999999 5543 3678999999999999999999999
Q ss_pred cccC
Q 010851 190 LVIY 193 (499)
Q Consensus 190 ~~l~ 193 (499)
++++
T Consensus 401 TPLh 404 (764)
T PHA02716 401 TPLT 404 (764)
T ss_pred ChHH
Confidence 9987
No 5
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-31 Score=277.45 Aligned_cols=219 Identities=17% Similarity=0.181 Sum_probs=192.4
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCC------------
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN------------ 76 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~------------ 76 (499)
..+..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 27 ~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~~~~~ 105 (434)
T PHA02874 27 CINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKI-GAHDIIKLLIDNGVDTSILPIPCIEKD 105 (434)
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCcchhccCCHH
Confidence 3566788899999999999999999999999999999999999999999997 999999999887754
Q ss_pred -----------CCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 010851 77 -----------INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYF 145 (499)
Q Consensus 77 -----------~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 145 (499)
++.+ +..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 106 ~i~~ll~~g~d~n~~--~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~ 183 (434)
T PHA02874 106 MIKTILDCGIDVNIK--DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA 183 (434)
T ss_pred HHHHHHHCcCCCCCC--CCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence 5555 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCcee
Q 010851 146 CGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLT 225 (499)
Q Consensus 146 ~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (499)
+ .++..|+|||| +|+..++.+++++|+++|++.+.++..+.++++.+...... .+.. +. .+..++
T Consensus 184 n--~~~~~g~tpL~-~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~-~i~~-Ll----------~~~~in 248 (434)
T PHA02874 184 N--VKDNNGESPLH-NAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS-AIEL-LI----------NNASIN 248 (434)
T ss_pred C--CCCCCCCCHHH-HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChH-HHHH-HH----------cCCCCC
Confidence 8 89999999999 99999999999999999999999988899999888765431 1111 11 133477
Q ss_pred eecCCCcchhHhHhhCCCCH
Q 010851 226 IYDQATKIRYKFASANEGDK 245 (499)
Q Consensus 226 ~~d~~g~tpl~~a~~~~~~~ 245 (499)
..|..|+||||+|+......
T Consensus 249 ~~d~~G~TpLh~A~~~~~~~ 268 (434)
T PHA02874 249 DQDIDGSTPLHHAINPPCDI 268 (434)
T ss_pred CcCCCCCCHHHHHHhcCCcH
Confidence 88899999999998644333
No 6
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.4e-31 Score=280.16 Aligned_cols=211 Identities=20% Similarity=0.199 Sum_probs=184.0
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCc-----------------------------
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL----------------------------- 63 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~----------------------------- 63 (499)
.+..+.||||+|+..|+.++|++|+++|+++|.+|..|+||||+||.. |+
T Consensus 33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~ 111 (477)
T PHA02878 33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKE-PNKLGMKEMIRSINKCSVFYTLVAIKDAFNN 111 (477)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC-ccHhHHHHHHHHHhccccccchhhHHHHHHc
Confidence 345688999999999999999999999999999999999999999975 32
Q ss_pred -----------------------------------HHHHHHHHHcCCCCCccCCCCC-CCcHHHHHHHcCCHHHHHHHHH
Q 010851 64 -----------------------------------INVAKTLIELGANINAYRPGGR-GGTPLHHAAKRGLEPTVRLLLS 107 (499)
Q Consensus 64 -----------------------------------~~~v~~Ll~~ga~~~~~~~d~~-g~TpL~~A~~~g~~~~v~~Ll~ 107 (499)
.+++++|+++|++++.+ +.. |+||||+|+..|+.+++++|++
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~--~~~~g~tpLh~A~~~~~~~iv~~Ll~ 189 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMK--DRHKGNTALHYATENKDQRLTELLLS 189 (477)
T ss_pred CCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCcc--CCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence 23778888899999988 667 9999999999999999999999
Q ss_pred CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh-cCCHHHHHHHHhcCCCCCCCCc
Q 010851 108 CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ-LMSRKIWVVVIPCGTANPSKPL 186 (499)
Q Consensus 108 ~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~-~~~~~~~~~Ll~~ga~~~~~~~ 186 (499)
+|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+. .++.+++++|+++|++++.++.
T Consensus 190 ~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in--~~d~~g~TpLh-~A~~~~~~~~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 190 YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD--ARDKCGNTPLH-ISVGYCKDYDILKLLLEHGVDVNAKSY 266 (477)
T ss_pred CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-HHHHhcCCHHHHHHHHHcCCCCCccCC
Confidence 999999999999999999999999999999999999999 99999999999 7775 4789999999999999998875
Q ss_pred -ccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhC
Q 010851 187 -RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 187 -~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
.+.+++|.+.. ....+..|+. .++++++.|..|.|||++|+..
T Consensus 267 ~~g~TpLh~A~~--~~~~v~~Ll~----------~gadin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 267 ILGLTALHSSIK--SERKLKLLLE----------YGADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred CCCCCHHHHHcc--CHHHHHHHHH----------CCCCCCCcCCCCCCHHHHHHHH
Confidence 68888888843 2222222221 2455899999999999999863
No 7
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=3.5e-31 Score=272.52 Aligned_cols=190 Identities=16% Similarity=0.130 Sum_probs=172.3
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC-CcHHHHHHHHHcCCCCCccCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~-g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
.+.++|.+|.+|.||||+|+..|+.++|++||++|+++|.+|..|+||||+|+..+ +..+++++|+++|++++... |.
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~-d~ 139 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSV-DE 139 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccccc-CC
Confidence 46788999999999999999999999999999999999999999999999998752 24799999999999999632 78
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHcccccccccccccCCCHHHHHh
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFLEALA 162 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A 162 (499)
.|.|||| |+..++.+++++|++.|++++.+|..|+||||+|+..+ +.+++++|+++|++++ .+|.+|+|||| +|
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin--~~d~~G~TpLH-~A 215 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS--KPDHDGNTPLH-IV 215 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc--ccCCCCCCHHH-HH
Confidence 9999997 67789999999999999999999999999999998755 4699999999999999 99999999999 88
Q ss_pred hhcC--CHHHHHHHHhcCCCCCCCCcccccccCccccccCh
Q 010851 163 PQLM--SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQP 201 (499)
Q Consensus 163 ~~~~--~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~ 201 (499)
+..+ +.+++++|+. |++++.++..+.++++.+......
T Consensus 216 a~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~ 255 (446)
T PHA02946 216 CSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSP 255 (446)
T ss_pred HHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCCh
Confidence 8765 7899999985 899999999999999998877664
No 8
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=2.6e-31 Score=278.22 Aligned_cols=187 Identities=21% Similarity=0.154 Sum_probs=166.7
Q ss_pred ccCccccCCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCC-cHHHHHHHHHcCCCCCccCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRP 82 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g-~~~~v~~Ll~~ga~~~~~~~ 82 (499)
+.+.+.++..|.||||+|+..| +.+++++|+++|+++|.+|..|+||||+|+.. | +.+++++|+++|++++.+
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~-~~~~~iv~lLl~~ga~in~~-- 113 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYN-ATTLDVIKLLIKAGADVNAK-- 113 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCcHHHHHHHHHcCCCCCCC--
Confidence 5778889999999999999998 99999999999999999999999999999998 6 699999999999999998
Q ss_pred CCCCCcHHHHHH--HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHcccccccccccccCCCHH
Q 010851 83 GGRGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFL 158 (499)
Q Consensus 83 d~~g~TpL~~A~--~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~g~t~L 158 (499)
|..|+||||+|+ ..++.+++++|+++|++++..|..|.||||+|+..+ +.+++++|+++|++++ ..|..|+|||
T Consensus 114 ~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~--~~d~~g~t~L 191 (471)
T PHA03095 114 DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY--AVDDRFRSLL 191 (471)
T ss_pred CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc--ccCCCCCCHH
Confidence 889999999999 556889999999999999999999999999998876 6799999999999988 6688999999
Q ss_pred HHHhhh--cCCHHHHHHHHhcCCCCCCCCcccccccCcccccc
Q 010851 159 EALAPQ--LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV 199 (499)
Q Consensus 159 h~~A~~--~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~ 199 (499)
| +++. .++.+++++|+++|++++.++..+.+++|++...+
T Consensus 192 h-~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~ 233 (471)
T PHA03095 192 H-HHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGS 233 (471)
T ss_pred H-HHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 9 5554 46788898999999988888888888887766543
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=269.61 Aligned_cols=219 Identities=20% Similarity=0.156 Sum_probs=191.1
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCC-----------------------CCcccCCCCChHHHHHHHcCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-----------------------SLEWMDKEGKTPLIVACMDSG 62 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-----------------------~~~~~d~~g~TpLh~Aa~~~g 62 (499)
.+++.+..+..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.. |
T Consensus 57 ~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~-~ 135 (434)
T PHA02874 57 HGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKK-G 135 (434)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHC-C
Confidence 356778889999999999999999999999988764 5677889999999999997 9
Q ss_pred cHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010851 63 LINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (499)
Q Consensus 63 ~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 142 (499)
+.+++++|+++|++++.+ |..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|
T Consensus 136 ~~~~v~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g 213 (434)
T PHA02874 136 DLESIKMLFEYGADVNIE--DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHG 213 (434)
T ss_pred CHHHHHHHHhCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 999999999999999998 889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcccccc-ChHHHHHHHHhhcCCCccCCCC
Q 010851 143 CYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV-QPRAVIALWKAKIDEPKFHQPD 221 (499)
Q Consensus 143 ~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 221 (499)
++++ .++..|.|||| .|+..+. +++++|+ .|++.+.++..+.+++|++.+.. ....+..++. .+
T Consensus 214 ~~i~--~~~~~g~TpL~-~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~----------~g 278 (434)
T PHA02874 214 NHIM--NKCKNGFTPLH-NAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLY----------HK 278 (434)
T ss_pred CCCc--CCCCCCCCHHH-HHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHH----------Cc
Confidence 9998 88999999999 8887665 5666666 68999999999999999988654 3333333222 24
Q ss_pred CceeeecCCCcchhHhHhhCC
Q 010851 222 PSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 222 ~~~~~~d~~g~tpl~~a~~~~ 242 (499)
+++++.|..|+|||++|....
T Consensus 279 ad~n~~d~~g~TpL~~A~~~~ 299 (434)
T PHA02874 279 ADISIKDNKGENPIDTAFKYI 299 (434)
T ss_pred CCCCCCCCCCCCHHHHHHHhC
Confidence 458999999999999999654
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=251.15 Aligned_cols=164 Identities=16% Similarity=0.103 Sum_probs=153.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC-cHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG-TPLHHAA 94 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~-TpL~~A~ 94 (499)
+|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ +..|+ ||||+|+
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~-g~~eivk~Ll~~gadin~~--~~~g~~TpL~~Aa 136 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS-GNMQTVKLFVKKNWRLMFY--GKTGWKTSFYHAV 136 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCcCcc--CCCCCcHHHHHHH
Confidence 478999999999999999999999999999999999999999998 9999999999999999988 67774 9999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCH-HHHHhhhcCCHHHHH
Q 010851 95 KRGLEPTVRLLLSCGANALVRN-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSF-LEALAPQLMSRKIWV 172 (499)
Q Consensus 95 ~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~-Lh~~A~~~~~~~~~~ 172 (499)
..|+.++|++|++++.+. .| ..|.||||+|+..|+.+++++|+++|++++ .+|..|.|| || +|+..++.++++
T Consensus 137 ~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n--~~d~~g~t~~L~-~Aa~~~~~e~v~ 211 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN--TNNSLLFIPDIK-LAIDNKDLEMLQ 211 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC--cccCCCCChHHH-HHHHcCCHHHHH
Confidence 999999999999987653 23 358999999999999999999999999999 899999987 99 999999999999
Q ss_pred HHHhcCCCCCCCCcc
Q 010851 173 VVIPCGTANPSKPLR 187 (499)
Q Consensus 173 ~Ll~~ga~~~~~~~~ 187 (499)
+|+++|++++.++..
T Consensus 212 lLl~~Ga~in~~~~~ 226 (284)
T PHA02791 212 ALFKYDINIYSVNLE 226 (284)
T ss_pred HHHHCCCCCccCccc
Confidence 999999999999874
No 11
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=273.85 Aligned_cols=217 Identities=17% Similarity=0.175 Sum_probs=115.4
Q ss_pred cCccccCCCchHHHHH-----HHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHH--HcCCcHHHHHHHHHcCCCCCcc
Q 010851 8 MNQHQQRQSKDELLYQ-----WVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVAC--MDSGLINVAKTLIELGANINAY 80 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~-----Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa--~~~g~~~~v~~Ll~~ga~~~~~ 80 (499)
++.+..+..|.||||+ |+..|+.+++++|+++|++++..|..|.||||+|+ .. |+.+++++|+++|++++..
T Consensus 59 ~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~-~~~~iv~~Ll~~g~~~~~~ 137 (480)
T PHA03100 59 ADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKS-NSYSIVEYLLDNGANVNIK 137 (480)
T ss_pred CCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhccc-ChHHHHHHHHHcCCCCCcc
Confidence 3444444555555555 55555555555555555555555555555555555 43 5555555555555555544
Q ss_pred CCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccC----
Q 010851 81 RPGGRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG---- 154 (499)
Q Consensus 81 ~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g---- 154 (499)
+..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|
T Consensus 138 --~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~~~~~~ 213 (480)
T PHA03100 138 --NSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN--AGDIETLLFT 213 (480)
T ss_pred --CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc--CCCCCCCcHH
Confidence 445555555555555 5555555555555555555555555555555555555555555555554 444444
Q ss_pred --CCHHHHHhhhcCC--HHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCC
Q 010851 155 --PSFLEALAPQLMS--RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQA 230 (499)
Q Consensus 155 --~t~Lh~~A~~~~~--~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~ 230 (499)
.|||| .|+..++ .+++++|+++|++++.++..+.+++|.+........+..++. .+++++..|..
T Consensus 214 ~~~t~l~-~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~----------~gad~n~~d~~ 282 (480)
T PHA03100 214 IFETPLH-IAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLD----------LGANPNLVNKY 282 (480)
T ss_pred HHHhHHH-HHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH----------cCCCCCccCCC
Confidence 45555 4555555 555555555555555555555555555554444333333221 23347777888
Q ss_pred CcchhHhHhh
Q 010851 231 TKIRYKFASA 240 (499)
Q Consensus 231 g~tpl~~a~~ 240 (499)
|.||+++|+.
T Consensus 283 g~tpl~~A~~ 292 (480)
T PHA03100 283 GDTPLHIAIL 292 (480)
T ss_pred CCcHHHHHHH
Confidence 8888888875
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.9e-30 Score=267.07 Aligned_cols=221 Identities=17% Similarity=0.132 Sum_probs=193.3
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
.+++.+.++..|.||||+|+..|+.+++++|+++|++++..+..+.||||+|+.. |+.+++++|++.|++++... +..
T Consensus 24 ~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~-~~~ 101 (413)
T PHA02875 24 IGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEE-GDVKAVEELLDLGKFADDVF-YKD 101 (413)
T ss_pred CCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHC-CCHHHHHHHHHcCCcccccc-cCC
Confidence 3577888899999999999999999999999999999999999999999999997 99999999999998875432 668
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~--~~d~~g~TpL~-~A~~~ 178 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD--IEDCCGCTPLI-IAMAK 178 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHH-HHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999998 89999999999 99999
Q ss_pred CCHHHHHHHHhcCCCCCCCCcccc-cccCccccccChHHHHHHHHhhcCCCccCCCCCc-eeeecCCCcchhHhHh
Q 010851 166 MSRKIWVVVIPCGTANPSKPLRFE-LVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPS-LTIYDQATKIRYKFAS 239 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~-~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~d~~g~tpl~~a~ 239 (499)
++.+++++|+++|++++..+..+. ++++++...+....+..++... .++. ++..+..+.|+++++.
T Consensus 179 g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g--------ad~n~~~~~~~~~~t~l~~~~ 246 (413)
T PHA02875 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG--------ADCNIMFMIEGEECTILDMIC 246 (413)
T ss_pred CCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC--------cCcchHhhcCCCchHHHHHHH
Confidence 999999999999999998887664 5666677777766666554332 2321 2234678899999876
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=5.4e-31 Score=263.78 Aligned_cols=209 Identities=25% Similarity=0.252 Sum_probs=186.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHc
Q 010851 18 DELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~ 96 (499)
...++.|+++|.++.||.|++. |.+++..|.+|.|+||+||.+ |+.+++++|+++|+++|... ..-+.||||+|+++
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiN-Nrl~v~r~li~~gadvn~~g-G~l~stPLHWAar~ 122 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAIN-NRLDVARYLISHGADVNAIG-GVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHc-CcHHHHHHHHHcCCCccccC-CCCCCCcchHHHHc
Confidence 5678999999999999999998 999999999999999999998 99999999999999999984 36789999999999
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHh
Q 010851 97 GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIP 176 (499)
Q Consensus 97 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~ 176 (499)
|+..+|.+|+++|||++.+|.+|.||||+|++.|+.-+|-+|+.+|++++ .+|.+|+|||| +|+.+++...+..|+.
T Consensus 123 G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d--~~D~~grTpLm-wAaykg~~~~v~~LL~ 199 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID--LRDNNGRTPLM-WAAYKGFALFVRRLLK 199 (600)
T ss_pred CcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC--CcCCCCCCHHH-HHHHhcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999 9999998888999999
Q ss_pred cCCCCCCCC-cccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhC
Q 010851 177 CGTANPSKP-LRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 177 ~ga~~~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
-|+..+.++ .++.+++|++...++...+. + ....+...+..|.+|+||+++|.+.
T Consensus 200 f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-L---------l~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 200 FGASLLLTDDNHGNTPLHWAVVGGNLTAVK-L---------LLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred hcccccccccccCCchHHHHHhcCCcceEe-h---------hhhcCCcccccccCCCCHHHHHHHh
Confidence 999998877 67788888877666643332 1 1123455788899999999999874
No 14
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=268.19 Aligned_cols=210 Identities=15% Similarity=0.073 Sum_probs=181.0
Q ss_pred chHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHH
Q 010851 17 KDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (499)
Q Consensus 17 g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~ 94 (499)
+.++||.++. .++.++|++|+++|+++|.+|.+|+||||+|+.. |+.+++++|+++|+++|.+ |..|+||||+|+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~-g~~eiv~lLL~~GAdin~~--d~~g~TpLh~A~ 113 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKI-NNNRIVAMLLTHGADPNAC--DKQHKTPLYYLS 113 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHCcCCCCCC--CCCCCCHHHHHH
Confidence 4699998774 4578999999999999999999999999999998 9999999999999999998 899999999999
Q ss_pred HcCC--HHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc--CCHH
Q 010851 95 KRGL--EPTVRLLLSCGANALV-RNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL--MSRK 169 (499)
Q Consensus 95 ~~g~--~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~--~~~~ 169 (499)
..++ .+++++|+++|++++. .|..|.|||| |+..++.+++++|+++|++++ .+|..|+|||| +|+.. ++.+
T Consensus 114 ~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~--~~d~~G~t~Lh-~A~~~~~~~~~ 189 (446)
T PHA02946 114 GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR--IVDKFGKNHIH-RHLMSDNPKAS 189 (446)
T ss_pred HcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc--ccCCCCCCHHH-HHHHhcCCCHH
Confidence 8764 7999999999999985 6899999997 677799999999999999999 99999999999 66554 4578
Q ss_pred HHHHHHhcCCCCCCCCcccccccCccccccC--hHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCCC
Q 010851 170 IWVVVIPCGTANPSKPLRFELVIYPSLQDVQ--PRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGD 244 (499)
Q Consensus 170 ~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~~ 244 (499)
++++|+++|++++.++..+.+++|++..... ...+..+. .+..++.+|+.|+||||+|+.+...
T Consensus 190 ~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl-----------~gadin~~d~~G~TpLh~A~~~~~~ 255 (446)
T PHA02946 190 TISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL-----------PSTDVNKQNKFGDSPLTLLIKTLSP 255 (446)
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHH-----------cCCCCCCCCCCCCCHHHHHHHhCCh
Confidence 9999999999999999999999999886542 22222111 1244899999999999999976553
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=2.7e-31 Score=265.94 Aligned_cols=186 Identities=25% Similarity=0.214 Sum_probs=174.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMD-KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+...+..|.+|-|+|||||.+++++++++|+++|+++|... .-|.||||+|+++ |+..+|++|+++||+++.+ |..
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~-G~~~vv~lLlqhGAdpt~~--D~~ 144 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN-GHISVVDLLLQHGADPTLK--DKQ 144 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc-CcHHHHHHHHHcCCCCcee--cCC
Confidence 56778889999999999999999999999999999999998 6789999999998 9999999999999999999 999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc-ccCCCHHHHHhhh
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQ 164 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~Lh~~A~~ 164 (499)
|.||||+|+..|+.-+|-+||.+|+|++.+|.+|+||||+|+.+|+...++.|+..++.+. .+| +.|.|||| +|+.
T Consensus 145 G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~--~~d~~~g~TpLH-wa~~ 221 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL--LTDDNHGNTPLH-WAVV 221 (600)
T ss_pred CCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc--ccccccCCchHH-HHHh
Confidence 9999999999999999999999999999999999999999999999988999999999998 555 99999999 9999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCcccccccCccccc
Q 010851 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 198 (499)
.|+.+++.+|++.|++.+.++.+|++++..+.+.
T Consensus 222 ~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 222 GGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999988888899888888888877776544
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.3e-30 Score=271.79 Aligned_cols=217 Identities=21% Similarity=0.205 Sum_probs=195.0
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHH-----HHHcCCcHHHHHHHHHcCCCCCccCCCC
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIV-----ACMDSGLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~-----Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
.+..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+ |+.. ++.+++++|+++|++++.. |.
T Consensus 28 ~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~-~~~~iv~~Ll~~ga~i~~~--d~ 104 (480)
T PHA03100 28 NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLT-DVKEIVKLLLEYGANVNAP--DN 104 (480)
T ss_pred chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhh-chHHHHHHHHHCCCCCCCC--CC
Confidence 44568899999999999999999999999999999999999999999 9987 9999999999999999988 88
Q ss_pred CCCcHHHHHH--HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC--CHHHHHHHHHcccccccccccccCCCHHHH
Q 010851 85 RGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFLEA 160 (499)
Q Consensus 85 ~g~TpL~~A~--~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~ 160 (499)
.|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++ .++..|.||||
T Consensus 105 ~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din--~~d~~g~tpL~- 181 (480)
T PHA03100 105 NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN--AKNRYGYTPLH- 181 (480)
T ss_pred CCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc--cccCCCCCHHH-
Confidence 9999999999 999999999999999999999999999999999999 9999999999999998 88999999999
Q ss_pred HhhhcCCHHHHHHHHhcCCCCCCCCccc------ccccCccccccC--hHHHHHHHHhhcCCCccCCCCCceeeecCCCc
Q 010851 161 LAPQLMSRKIWVVVIPCGTANPSKPLRF------ELVIYPSLQDVQ--PRAVIALWKAKIDEPKFHQPDPSLTIYDQATK 232 (499)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~------~~~l~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~ 232 (499)
+|+..++.+++++|+++|++.+..+..+ .++++.+..... ...+..++. .+..++..|..|.
T Consensus 182 ~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~----------~g~din~~d~~g~ 251 (480)
T PHA03100 182 IAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLS----------YGVPINIKDVYGF 251 (480)
T ss_pred HHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHH----------cCCCCCCCCCCCC
Confidence 9999999999999999999999887766 666666665555 444443332 2344888999999
Q ss_pred chhHhHhhCC
Q 010851 233 IRYKFASANE 242 (499)
Q Consensus 233 tpl~~a~~~~ 242 (499)
||||+|+...
T Consensus 252 TpL~~A~~~~ 261 (480)
T PHA03100 252 TPLHYAVYNN 261 (480)
T ss_pred CHHHHHHHcC
Confidence 9999999643
No 17
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.4e-30 Score=278.43 Aligned_cols=231 Identities=16% Similarity=0.108 Sum_probs=154.2
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHH---------------
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTL--------------- 70 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~L--------------- 70 (499)
.++++|.+|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|
T Consensus 167 ~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~-~~~~ivk~Ll~~~~~~~~~~~~L~ 245 (682)
T PHA02876 167 GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDS-KNIDTIKAIIDNRSNINKNDLSLL 245 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHc-CCHHHHHHHHhcCCCCCCCcHHHH
Confidence 3678888999999999999999999999999999999888777777777777765 555554443
Q ss_pred --------------HHcCCCCCccCCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCcccCCCCCCHHHHHHHcC-CHHH
Q 010851 71 --------------IELGANINAYRPGGRGGTPLHHAAKRGLE-PTVRLLLSCGANALVRNDDCHTALGVARIKG-HINV 134 (499)
Q Consensus 71 --------------l~~ga~~~~~~~d~~g~TpL~~A~~~g~~-~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g-~~~~ 134 (499)
++.|++++.. |..|+||||+|+..++. +++++|++.|++++.+|..|.||||+|+..| +.++
T Consensus 246 ~ai~~~~~~~~~~Ll~~g~~vn~~--d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~ 323 (682)
T PHA02876 246 KAIRNEDLETSLLLYDAGFSVNSI--DDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTEN 323 (682)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHH
Confidence 3344455555 56677777777777665 4667777777777777777777777777666 3666
Q ss_pred HHHHHHcccccccccccccCCCHHHHHhhh-cCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcC
Q 010851 135 VRAIESHICYFCGWLREFYGPSFLEALAPQ-LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKID 213 (499)
Q Consensus 135 v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~-~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 213 (499)
+++|+..|++++ .+|..|+|||| +|+. .++.+++++|+++|++++.++..+.+++|++...+....+..++.....
T Consensus 324 v~~Ll~~gadin--~~d~~g~TpLh-~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad 400 (682)
T PHA02876 324 IRTLIMLGADVN--AADRLYITPLH-QASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD 400 (682)
T ss_pred HHHHHHcCCCCC--CcccCCCcHHH-HHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 666666666666 56666666666 4433 3455666666666666666666666666665554444433333211000
Q ss_pred -----------------------CCc-cCCCCCceeeecCCCcchhHhHhhCC
Q 010851 214 -----------------------EPK-FHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 214 -----------------------~~~-~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
..+ +...+..++.+|..|+||||+|+...
T Consensus 401 ~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 401 IEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 001 11134558899999999999999644
No 18
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.5e-30 Score=236.66 Aligned_cols=162 Identities=17% Similarity=0.192 Sum_probs=145.4
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC-CcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~-g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
.+.+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ ++.+++++|+++|+++|.++ +..|+||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT-RDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC-CCCCCCHHHH
Confidence 45678999999999999999999985 5678899999999999852 48999999999999999882 2589999999
Q ss_pred HHHc---CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHH--cCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCC
Q 010851 93 AAKR---GLEPTVRLLLSCGANALVRNDDCHTALGVARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMS 167 (499)
Q Consensus 93 A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~ 167 (499)
|+.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++ .+|..|.||||.+++..++
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin--~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL--NKDFDNNNILYSYILFHSD 171 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--cccCCCCcHHHHHHHhcCC
Confidence 8864 47999999999999999999999999999986 468999999999999999 8999999999955677889
Q ss_pred HHHHHHHHhcCCCC
Q 010851 168 RKIWVVVIPCGTAN 181 (499)
Q Consensus 168 ~~~~~~Ll~~ga~~ 181 (499)
.+++++|+++|+++
T Consensus 172 ~~iv~~Ll~~Gadi 185 (209)
T PHA02859 172 KKIFDFLTSLGIDI 185 (209)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999874
No 19
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.7e-29 Score=259.93 Aligned_cols=209 Identities=18% Similarity=0.091 Sum_probs=189.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHc
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~ 96 (499)
.+++||.|+..|+.+++++|+++|++++.++..|.||||+|+.. |+.+++++|+++|++++.. +..+.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~--~~~~~t~L~~A~~~ 78 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKF-RDSEAIKLLMKHGAIPDVK--YPDIESELHDAVEE 78 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCcccc--CCCcccHHHHHHHC
Confidence 57899999999999999999999999999999999999999998 9999999999999999987 77899999999999
Q ss_pred CCHHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHH
Q 010851 97 GLEPTVRLLLSCGANAL-VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 97 g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll 175 (499)
|+.++|++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..++.+++++|+
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~--~~~~~g~tpLh-~A~~~~~~~~v~~Ll 155 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD--IPNTDKFSPLH-LAVMMGDIKGIELLI 155 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC--CCCCCCCCHHH-HHHHcCCHHHHHHHH
Confidence 99999999999998763 456789999999999999999999999999999 89999999999 999999999999999
Q ss_pred hcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCC-cchhHhHhhC
Q 010851 176 PCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQAT-KIRYKFASAN 241 (499)
Q Consensus 176 ~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g-~tpl~~a~~~ 241 (499)
++|++.+.++..+.++++++...+....+..++.. ++.++..+..| .|++++|+..
T Consensus 156 ~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~----------ga~~n~~~~~~~~t~l~~A~~~ 212 (413)
T PHA02875 156 DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDS----------GANIDYFGKNGCVAALCYAIEN 212 (413)
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC----------CCCCCcCCCCCCchHHHHHHHc
Confidence 99999999999999999999988887666554432 33466677776 4788988853
No 20
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=8.4e-30 Score=267.57 Aligned_cols=229 Identities=16% Similarity=0.169 Sum_probs=184.5
Q ss_pred cccCccccCCCchHHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC-----CcHHHHHHHHHcCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIA--GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-----GLINVAKTLIELGANIN 78 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~-----g~~~~v~~Ll~~ga~~~ 78 (499)
.|+++|.+ .+|.|+||+++.. ++.++|++||++|+++|.++ .+.||||.|+.++ ++.+++++|+++|+++|
T Consensus 25 ~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin 102 (494)
T PHA02989 25 TGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADIN 102 (494)
T ss_pred cCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC
Confidence 36778877 5789998776654 37899999999999999886 5799999998641 35789999999999999
Q ss_pred ccCCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHc--CCHHHHHHHHHccccccccc-cc
Q 010851 79 AYRPGGRGGTPLHHAAKR---GLEPTVRLLLSCGANA-LVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWL-RE 151 (499)
Q Consensus 79 ~~~~d~~g~TpL~~A~~~---g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~--g~~~~v~~Ll~~g~~~~~~~-~~ 151 (499)
.+ |..|.||||.|+.. ++.+++++|+++|+|+ +.+|..|+||||+|+.. ++.++|++|+++|++++ . .+
T Consensus 103 ~~--d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~--~~~~ 178 (494)
T PHA02989 103 LK--TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLF--EKTS 178 (494)
T ss_pred CC--CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--cccc
Confidence 99 88999999998765 6789999999999999 89999999999998764 68999999999999998 5 68
Q ss_pred ccCCCHHHHHhhhc----CCHHHHHHHHhcCCCCCCCCcccccccCc-------------------------cccccChH
Q 010851 152 FYGPSFLEALAPQL----MSRKIWVVVIPCGTANPSKPLRFELVIYP-------------------------SLQDVQPR 202 (499)
Q Consensus 152 ~~g~t~Lh~~A~~~----~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~-------------------------~~~~~~~~ 202 (499)
..|.|||| +|... ++.+++++|+++|++++..+..+.++++. ..++..+.
T Consensus 179 ~~g~tpL~-~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~ 257 (494)
T PHA02989 179 LYGLTPMN-IYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGF 257 (494)
T ss_pred ccCCChHH-HHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCC
Confidence 89999999 66554 58999999999999999888655555532 34455677
Q ss_pred HHHHHHH--hhcCCCccCC-CCCceeeecCCCcchhHhHhhC
Q 010851 203 AVIALWK--AKIDEPKFHQ-PDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 203 ~~~~l~~--~~~~~~~~~~-~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
|+++++. .+.+..++.. .+++++.+|+.|+|||++|+.+
T Consensus 258 TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 258 NPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred CHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 7777762 2222222222 4555888888888888888864
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.9e-29 Score=272.75 Aligned_cols=227 Identities=18% Similarity=0.118 Sum_probs=196.8
Q ss_pred ccCccccCCCchHHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDV-DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~-~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+++.+.+|..|.||||+|+..|+. +++++|+++|++++.+|..|.||||+|+..+...+++++|+..|++++.+ |..
T Consensus 263 g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~--d~~ 340 (682)
T PHA02876 263 GFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA--DRL 340 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc--ccC
Confidence 456788899999999999999997 69999999999999999999999999999833699999999999999998 889
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 86 GGTPLHHAAKR-GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 86 g~TpL~~A~~~-g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
|+||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.|||| +|+.
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~--~~~~~g~T~Lh-~A~~ 417 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE--ALSQKIGTALH-FALC 417 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCCchHH-HHHH
Confidence 99999999986 57899999999999999999999999999999999999999999999999 88999999999 6655
Q ss_pred -cCCHHHHHHHHhcCCCCCCCCcccccccCccccccC-hHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCC
Q 010851 165 -LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ-PRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 165 -~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
.+...++++|+++|++++.++..|.++++++..... ...+..|.. .+.+++..|..|.||+++|+...
T Consensus 418 ~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~----------~Gad~n~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 418 GTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD----------NGADVNAINIQNQYPLLIALEYH 487 (682)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHH----------CCCCCCCCCCCCCCHHHHHHHhC
Confidence 455678999999999999999999999999987553 233332222 24458999999999999999754
Q ss_pred CCHHHHH
Q 010851 243 GDKHQLQ 249 (499)
Q Consensus 243 ~~~~~l~ 249 (499)
. ...+.
T Consensus 488 ~-~v~~L 493 (682)
T PHA02876 488 G-IVNIL 493 (682)
T ss_pred C-HHHHH
Confidence 3 34433
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=4.4e-29 Score=261.23 Aligned_cols=185 Identities=21% Similarity=0.233 Sum_probs=169.6
Q ss_pred cccCccccCCCchHHHHHHHHcCCH-------------------------------------------------------
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDV------------------------------------------------------- 30 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~------------------------------------------------------- 30 (499)
.+++.|.+|.+|.||||+|+..|+.
T Consensus 59 ~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~ 138 (477)
T PHA02878 59 RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDK 138 (477)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhh
Confidence 3578889999999999999987543
Q ss_pred ---------HHHHHHHHcCCCCcccCCC-CChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHH
Q 010851 31 ---------DAIRALRSQGASLEWMDKE-GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (499)
Q Consensus 31 ---------~~v~~Ll~~g~~~~~~d~~-g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~ 100 (499)
+++++|+++|++++.+|.. |.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+
T Consensus 139 ~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~-~~~~iv~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~ 215 (477)
T PHA02878 139 KSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATEN-KDQRLTELLLSYGANVNIP--DKTNNSPLHHAVKHYNKP 215 (477)
T ss_pred ccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhC-CCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHhCCHH
Confidence 2677788889999999988 99999999998 9999999999999999998 889999999999999999
Q ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcccccccccccc-cCCCHHHHHhhhcCCHHHHHHHHhcC
Q 010851 101 TVRLLLSCGANALVRNDDCHTALGVARIK-GHINVVRAIESHICYFCGWLREF-YGPSFLEALAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 101 ~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~Lh~~A~~~~~~~~~~~Ll~~g 178 (499)
++++|++.|++++.+|..|.||||+|+.. ++.+++++|+++|++++ .++. .|.|||| +| .++.+++++|+++|
T Consensus 216 iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn--~~~~~~g~TpLh-~A--~~~~~~v~~Ll~~g 290 (477)
T PHA02878 216 IVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN--AKSYILGLTALH-SS--IKSERKLKLLLEYG 290 (477)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC--ccCCCCCCCHHH-HH--ccCHHHHHHHHHCC
Confidence 99999999999999999999999999976 78999999999999999 6665 7999999 77 57789999999999
Q ss_pred CCCCCCCcccccccCccccc
Q 010851 179 TANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 179 a~~~~~~~~~~~~l~~~~~~ 198 (499)
++++..+..+.++++.+...
T Consensus 291 adin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 291 ADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred CCCCCcCCCCCCHHHHHHHH
Confidence 99999999999999998764
No 23
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.1e-28 Score=256.65 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=161.1
Q ss_pred CCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHc----CCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 15 QSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 15 ~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~----~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
..|.|+++.+.. .++.++|++|+++|+++|.+|..|.||||+|+.+ .++.+++++|+++|+++|.+ |..|+|
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~--d~~G~T 111 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK--NSDGET 111 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC--CCCcCc
Confidence 345666664443 3478888888888888888888888888887642 14578888888888888887 778888
Q ss_pred HHHHHHHcC---CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCC---HHHHHHHHHcccccccccc-cccCCCHHHHH
Q 010851 89 PLHHAAKRG---LEPTVRLLLSCGANALVRNDDCHTALGVARIKGH---INVVRAIESHICYFCGWLR-EFYGPSFLEAL 161 (499)
Q Consensus 89 pL~~A~~~g---~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~---~~~v~~Ll~~g~~~~~~~~-~~~g~t~Lh~~ 161 (499)
|||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..++ .+++++|+++|++++ .+ +..|.|||| .
T Consensus 112 pLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin--~~~~~~~~t~Lh-~ 188 (489)
T PHA02798 112 PLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN--THNNKEKYDTLH-C 188 (489)
T ss_pred HHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc--cccCcCCCcHHH-H
Confidence 888888775 6788888888888888888888888888888877 888888888888887 55 456788888 5
Q ss_pred hhh----cCCHHHHHHHHhcCCCCCCCCcccccccC--------------------------ccccccChHHHHHHHH--
Q 010851 162 APQ----LMSRKIWVVVIPCGTANPSKPLRFELVIY--------------------------PSLQDVQPRAVIALWK-- 209 (499)
Q Consensus 162 A~~----~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~--------------------------~~~~~~~~~~~~~l~~-- 209 (499)
+.. .++.+++++|+++|++++..+..+.++++ ...++..+.|+++++.
T Consensus 189 ~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~ 268 (489)
T PHA02798 189 YFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSH 268 (489)
T ss_pred HHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHc
Confidence 543 34688888888888877765544433322 2234556677777662
Q ss_pred hhcCCCccCC-CCCceeeecCCCcchhHhHhhCC
Q 010851 210 AKIDEPKFHQ-PDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 210 ~~~~~~~~~~-~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
.+.+...+.. .++++++.|..|+|||++|+.+.
T Consensus 269 ~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~ 302 (489)
T PHA02798 269 NNRKIFEYLLQLGGDINIITELGNTCLFTAFENE 302 (489)
T ss_pred CcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcC
Confidence 1222222222 45569999999999999999643
No 24
>PHA03095 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.5e-27 Score=248.22 Aligned_cols=222 Identities=19% Similarity=0.179 Sum_probs=199.5
Q ss_pred cccCccccCCCchHHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCChHHHHHHHc-CCcHHHHHHHHHcCCCCCccCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMD-SGLINVAKTLIELGANINAYRPG 83 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g-~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~-~g~~~~v~~Ll~~ga~~~~~~~d 83 (499)
.+++.|.+|..|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+.. .++.+++++|+++|++++.+ |
T Consensus 72 ~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~--d 149 (471)
T PHA03095 72 AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNAL--D 149 (471)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc--C
Confidence 36788899999999999999999 59999999999999999999999999999942 26789999999999999998 8
Q ss_pred CCCCcHHHHHHHcC--CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHc--CCHHHHHHHHHcccccccccccccCCCHHH
Q 010851 84 GRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWLREFYGPSFLE 159 (499)
Q Consensus 84 ~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh 159 (499)
..|.||||+|+..+ +.+++++|+++|++++..|..|.||||+|+.. ++.+++++|+++|++++ .+|..|+||||
T Consensus 150 ~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~--~~d~~g~tpLh 227 (471)
T PHA03095 150 LYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA--ATDMLGNTPLH 227 (471)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc--ccCCCCCCHHH
Confidence 89999999999876 68999999999999999999999999999875 78899999999999999 99999999999
Q ss_pred HHhhhcCCH--HHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHh
Q 010851 160 ALAPQLMSR--KIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKF 237 (499)
Q Consensus 160 ~~A~~~~~~--~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~ 237 (499)
+|+..++. .+++.|++.|++++.++..+.+++|++...+....+..|+.. ++++++.|..|+|||++
T Consensus 228 -~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~----------gad~n~~~~~g~tpl~~ 296 (471)
T PHA03095 228 -SMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIAL----------GADINAVSSDGNTPLSL 296 (471)
T ss_pred -HHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc----------CCCCcccCCCCCCHHHH
Confidence 88888764 688899999999999999999999999988887776665532 34488999999999999
Q ss_pred HhhCC
Q 010851 238 ASANE 242 (499)
Q Consensus 238 a~~~~ 242 (499)
|+.+.
T Consensus 297 A~~~~ 301 (471)
T PHA03095 297 MVRNN 301 (471)
T ss_pred HHHhC
Confidence 99633
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=7.3e-28 Score=245.57 Aligned_cols=226 Identities=19% Similarity=0.145 Sum_probs=166.9
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+++.+..|..+.+|||+|+..|+.++++.|+++|+|+|..|..|.||||+||.. ++.|..+.|++.|+++... |.+|
T Consensus 111 gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~-~~~E~~k~Li~~~a~~~K~--~~~~ 187 (929)
T KOG0510|consen 111 GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARK-NKVEAKKELINKGADPCKS--DIDG 187 (929)
T ss_pred CCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhc-ChHHHHHHHHhcCCCCCcc--cCcC
Confidence 345556677777777777777777777777777777777777777777777776 7777777777777777766 6777
Q ss_pred CcHHHHHHHcCCHHHHHHHHH-----CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccccc-------------c
Q 010851 87 GTPLHHAAKRGLEPTVRLLLS-----CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCG-------------W 148 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-------------~ 148 (499)
.+|+|.|++.|..++.+..+. .+..++..|..|.||||.|+..|+.++++.+++.|..+.. +
T Consensus 188 ~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~ 267 (929)
T KOG0510|consen 188 NFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVN 267 (929)
T ss_pred CchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhh
Confidence 777777777777777777776 4566777777788888888888888888888877653321 2
Q ss_pred cccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeec
Q 010851 149 LREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYD 228 (499)
Q Consensus 149 ~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d 228 (499)
..|.+|.|||| +|+..|+.+.++.|+..|++++.++...++++|.++..+..+++..|+++.- ...++..|
T Consensus 268 ~~d~dg~tpLH-~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~--------~rllne~D 338 (929)
T KOG0510|consen 268 DEDNDGCTPLH-YAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESD--------TRLLNESD 338 (929)
T ss_pred cccccCCchHH-HHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcC--------cccccccc
Confidence 45678888888 8888888888888888888888888888888888888888888887776211 12256667
Q ss_pred CCCcchhHhHhhCCCC
Q 010851 229 QATKIRYKFASANEGD 244 (499)
Q Consensus 229 ~~g~tpl~~a~~~~~~ 244 (499)
-.|.||||+|+.+.++
T Consensus 339 ~~g~tpLHlaa~~gH~ 354 (929)
T KOG0510|consen 339 LHGMTPLHLAAKSGHD 354 (929)
T ss_pred ccCCCchhhhhhcCHH
Confidence 7788888888854443
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=1.7e-27 Score=242.98 Aligned_cols=236 Identities=16% Similarity=0.067 Sum_probs=201.8
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHH-----cCCCCCccC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIE-----LGANINAYR 81 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~-----~ga~~~~~~ 81 (499)
+.++|..|+.|.||||.|+..++.|..+.|++.|+++-..|.+|++|+|.|++. |..|+.++.+. .+..+|..
T Consensus 144 ~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s-~s~e~mEi~l~~~g~~r~~~in~~- 221 (929)
T KOG0510|consen 144 GADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARS-GSKECMEIFLPEHGYERQTHINFD- 221 (929)
T ss_pred cCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHh-cchhhhhhhhccccchhhcccccc-
Confidence 478899999999999999999999988999999999999999999999999998 99999999998 67889988
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGAN---------------ALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 82 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~---------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
+..|.||||.|+..|++++++.+|+.|+. ++..|++|.||||+|++.|+.+.|+.|+..|++++
T Consensus 222 -~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~ 300 (929)
T KOG0510|consen 222 -NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN 300 (929)
T ss_pred -cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc
Confidence 88999999999999999999999998753 34568999999999999999999999999999999
Q ss_pred cccccccCCCHHHHHhhhcCCHHHHHHHHh-cC-CCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCce
Q 010851 147 GWLREFYGPSFLEALAPQLMSRKIWVVVIP-CG-TANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSL 224 (499)
Q Consensus 147 ~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~-~g-a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (499)
.++.++.|||| .|+..|+.+.++-||+ .| ...+..+..+.+++|.+.+.+..+.+..|++....... .
T Consensus 301 --~kn~d~~spLH-~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~-------~ 370 (929)
T KOG0510|consen 301 --SKNKDEESPLH-FAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN-------M 370 (929)
T ss_pred --ccCCCCCCchH-HHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc-------c
Confidence 99999999999 9999999999999998 33 34567788999999999988888888777643321111 0
Q ss_pred eeecCCCcchhHhHh-hCCCCHHHHHHHHHHh
Q 010851 225 TIYDQATKIRYKFAS-ANEGDKHQLQWLDNAC 255 (499)
Q Consensus 225 ~~~d~~g~tpl~~a~-~~~~~~~~l~~~~~~c 255 (499)
.-.|.+|.|+||+|+ ..+...++.+..+++-
T Consensus 371 ~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~ 402 (929)
T KOG0510|consen 371 SEADSDGNTALHLAAKYGNTSAVQKLISHGAD 402 (929)
T ss_pred cccccCCchhhhHHHHhccHHHHHHHHHcCCc
Confidence 133999999999999 4444555555555443
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.95 E-value=3.9e-27 Score=250.30 Aligned_cols=197 Identities=16% Similarity=0.096 Sum_probs=167.1
Q ss_pred HcCCHHHHHHHHHcC-CCCccc-CCCCChHHHHHHHc-CCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCC--HH
Q 010851 26 IAGDVDAIRALRSQG-ASLEWM-DKEGKTPLIVACMD-SGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL--EP 100 (499)
Q Consensus 26 ~~g~~~~v~~Ll~~g-~~~~~~-d~~g~TpLh~Aa~~-~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~--~~ 100 (499)
+.++.++|++|+++| +++|.+ |..|.||||+|+.. .++.+++++|+++|+++|.+ |..|.||||+|+..|+ .+
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k--D~~G~TPLH~Aa~~g~~~~e 228 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ--NNHLITPLHTYLITGNVCAS 228 (764)
T ss_pred cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCCCHH
Confidence 468999999999999 999998 89999999998743 25789999999999999998 8899999999999995 59
Q ss_pred HHHHHHHCCCCCcccCCCCCCHHHHH-------------------------------------HHcCCHHHHHHHHHccc
Q 010851 101 TVRLLLSCGANALVRNDDCHTALGVA-------------------------------------RIKGHINVVRAIESHIC 143 (499)
Q Consensus 101 ~v~~Ll~~ga~~~~~d~~g~tpL~~A-------------------------------------~~~g~~~~v~~Ll~~g~ 143 (499)
+|++|+++|++++.+|..|+||||+| +..|+.+++++|+++|+
T Consensus 229 IVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GA 308 (764)
T PHA02716 229 VIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV 308 (764)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCC
Confidence 99999999999999999999999975 34578899999999999
Q ss_pred ccccccccccCCCHHHHHhh--hcCCHHHHHHHHhcCCCCCCCCcccccccCccccc--------------cChHHHHHH
Q 010851 144 YFCGWLREFYGPSFLEALAP--QLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD--------------VQPRAVIAL 207 (499)
Q Consensus 144 ~~~~~~~~~~g~t~Lh~~A~--~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~l 207 (499)
+++ .+|..|+|||| +|+ ..++.+++++|+++|++++.++..+.+++|++... .....+..|
T Consensus 309 dIN--~kD~~G~TPLH-~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklL 385 (764)
T PHA02716 309 KLH--YKDSAGRTCLH-QYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCL 385 (764)
T ss_pred cee--ccCCCCCCHHH-HHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHH
Confidence 999 89999999999 554 35689999999999999999999999999875431 111112111
Q ss_pred HHhhcCCCccCCCCCceeeecCCCcchhHh
Q 010851 208 WKAKIDEPKFHQPDPSLTIYDQATKIRYKF 237 (499)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~ 237 (499)
+ . .+.+++.+|..|+||||.
T Consensus 386 L--------~--~GADIn~kn~~G~TPLh~ 405 (764)
T PHA02716 386 I--------S--LGADITAVNCLGYTPLTS 405 (764)
T ss_pred H--------H--CCCCCCCcCCCCCChHHH
Confidence 1 1 345588999999999994
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.95 E-value=8.5e-27 Score=244.86 Aligned_cols=199 Identities=13% Similarity=0.120 Sum_probs=145.8
Q ss_pred ccCccccCCCchHHHHHHHH------cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC--CcHHHHHHHHHcCCCC-
Q 010851 7 SMNQHQQRQSKDELLYQWVI------AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANI- 77 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~------~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~--g~~~~v~~Ll~~ga~~- 77 (499)
|+++|.++ .+.||||.|+. .|+.++|++|+++|+++|.+|..|.||||.|+..+ |+.+++++|+++|+++
T Consensus 60 GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin 138 (494)
T PHA02989 60 GADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN 138 (494)
T ss_pred CCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc
Confidence 45555554 45777777654 36677777777777777777777777777665431 4567777777777777
Q ss_pred CccCCCCCCCcHHHHHHHc--CCHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHcC----CHHHHHHHHHccccccc---
Q 010851 78 NAYRPGGRGGTPLHHAAKR--GLEPTVRLLLSCGANALV-RNDDCHTALGVARIKG----HINVVRAIESHICYFCG--- 147 (499)
Q Consensus 78 ~~~~~d~~g~TpL~~A~~~--g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~~~--- 147 (499)
+.+ |..|+||||+|+.. ++.++|++|+++|++++. .+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 139 ~~~--d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~ 216 (494)
T PHA02989 139 DVK--NSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNN 216 (494)
T ss_pred ccc--CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCC
Confidence 555 66777777776643 466777777777777766 4667777777776543 66777777777765541
Q ss_pred ---------------------------------ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCc
Q 010851 148 ---------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYP 194 (499)
Q Consensus 148 ---------------------------------~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~ 194 (499)
+.+|..|+|||| +|+..++.+++++|+++|++++.++..+.+++++
T Consensus 217 ~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~-~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~ 295 (494)
T PHA02989 217 GSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLL-ISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTY 295 (494)
T ss_pred ccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHH-HHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 156777999999 9999999999999999999999999999999999
Q ss_pred cccccChHHHHHHHH
Q 010851 195 SLQDVQPRAVIALWK 209 (499)
Q Consensus 195 ~~~~~~~~~~~~l~~ 209 (499)
+........+..++.
T Consensus 296 A~~~~~~~iv~~LL~ 310 (494)
T PHA02989 296 AIKHGNIDMLNRILQ 310 (494)
T ss_pred HHHcCCHHHHHHHHh
Confidence 998888776665553
No 29
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=1.2e-26 Score=215.09 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=137.0
Q ss_pred ccccCCCchHHHHHHHHcC--CHHHHHHHHHcCCCCcccC-CCCChHHHHHHHc--CCcHHHHHHHHHcCCCCCccCCCC
Q 010851 10 QHQQRQSKDELLYQWVIAG--DVDAIRALRSQGASLEWMD-KEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g--~~~~v~~Ll~~g~~~~~~d-~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
.+..|..|.||||+|+..+ +.+++++|+++|+++|.++ ..|+||||+|+.. .++.+++++|+++|+++|.+ |.
T Consensus 44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~--d~ 121 (209)
T PHA02859 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE--DE 121 (209)
T ss_pred hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc--CC
Confidence 5668899999999999854 8999999999999999997 4899999998864 14789999999999999998 88
Q ss_pred CCCcHHHHHHH--cCCHHHHHHHHHCCCCCcccCCCCCCHHHH-HHHcCCHHHHHHHHHcccccccccccccCCCHHHHH
Q 010851 85 RGGTPLHHAAK--RGLEPTVRLLLSCGANALVRNDDCHTALGV-ARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL 161 (499)
Q Consensus 85 ~g~TpL~~A~~--~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~-A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~ 161 (499)
.|.||||+|+. .++.+++++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++ .+|..|+|||| +
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~--~~d~~g~tpl~-l 198 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN--ETNKSGYNCYD-L 198 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-H
Confidence 99999999986 468999999999999999999999999996 567889999999999999999 99999999999 7
Q ss_pred hhhc
Q 010851 162 APQL 165 (499)
Q Consensus 162 A~~~ 165 (499)
|...
T Consensus 199 a~~~ 202 (209)
T PHA02859 199 IKFR 202 (209)
T ss_pred Hhhh
Confidence 7654
No 30
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.6e-26 Score=230.54 Aligned_cols=169 Identities=14% Similarity=0.027 Sum_probs=152.1
Q ss_pred ccCCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCcc-CC---CCC
Q 010851 12 QQRQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAY-RP---GGR 85 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~-~~---d~~ 85 (499)
.++..++|+||+++. .|+.++|++|+++|++++.. ++.||||+|+.+ |+.+++++|+.+|++.+.. +. +..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~-~~~eIVk~Lls~Ga~~~n~~~~~l~~~~ 187 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK-KESSVVEFILNCGIPDENDVKLDLYKII 187 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc-CcHHHHHHHHhcCCcccccccchhhhhh
Confidence 678889999999999 99999999999999999884 558999999987 9999999999999854322 10 134
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
|.|++|.|...++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN--~~d~~G~TpLh-~Aa~~ 264 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVN--AVMSNGYTCLD-VAVDR 264 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHc
Confidence 7899999999999999999999999999999999999999999999999999999999999 99999999999 88887
Q ss_pred C--------CHHHHHHHHhcCCCCCCCCc
Q 010851 166 M--------SRKIWVVVIPCGTANPSKPL 186 (499)
Q Consensus 166 ~--------~~~~~~~Ll~~ga~~~~~~~ 186 (499)
| +.+++++|+++|++.+....
T Consensus 265 g~~~~~~~~~~eIvelLL~~gadI~~~~~ 293 (437)
T PHA02795 265 GSVIARRETHLKILEILLREPLSIDCIKL 293 (437)
T ss_pred CCcccccccHHHHHHHHHhCCCCCCchhH
Confidence 7 46999999999998876553
No 31
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=9.6e-27 Score=248.66 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=175.9
Q ss_pred cccCccccCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcH----HHHHHHHHcCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIA---GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANIN 78 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~----~~v~~Ll~~ga~~~ 78 (499)
++...+.+|.+|+||||+|+.. |+.++|++||++|++++.+|..|+||||+|+.. |+. +++++|++.+...|
T Consensus 21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~-g~~~v~~~~~~~Ll~~~~~~n 99 (661)
T PHA02917 21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNS-RHVKVNKDIAMALLEATGYSN 99 (661)
T ss_pred ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHc-CChhHHHHHHHHHHhccCCCC
Confidence 4556677899999999998655 889999999999999999999999999999997 774 56788988765555
Q ss_pred ccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHcccccccccccc---c
Q 010851 79 AYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR--IKGHINVVRAIESHICYFCGWLREF---Y 153 (499)
Q Consensus 79 ~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~~---~ 153 (499)
.. + ..+++|+|+.+++.++|++|+++|+|++.+|..|+||||+|+ ..|+.++|++|+++|++++ .+|. .
T Consensus 100 ~~--~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn--~~d~~~~~ 173 (661)
T PHA02917 100 IN--D--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL--YEDEDDEY 173 (661)
T ss_pred CC--C--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc--cccccccc
Confidence 54 3 237788899999999999999999999999999999999654 5789999999999999997 4443 3
Q ss_pred C-----------CCHHHHHhhh-----------cCCHHHHHHHHhcCCCCCCCCcccccccCccccccChH--HHHHHHH
Q 010851 154 G-----------PSFLEALAPQ-----------LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPR--AVIALWK 209 (499)
Q Consensus 154 g-----------~t~Lh~~A~~-----------~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~--~~~~l~~ 209 (499)
| .|||| +|+. .++.+++++|+++|++++.++..+.+++|++...+... .+..|.+
T Consensus 174 g~~~~~~~~~~~~t~L~-~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 174 GYAYDDYQPRNCGTVLH-LYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred ccccccccccccccHHH-HHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 4 59999 6654 46899999999999999999999999999999877643 3333221
Q ss_pred hhcCCCccCCCCCceeeecCCCcchhHhHh
Q 010851 210 AKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (499)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~ 239 (499)
.... +...++.|..|.++++++.
T Consensus 253 -g~d~------~~~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 253 -GIDN------TAYSYIDDLTCCTRGIMAD 275 (661)
T ss_pred -CCcc------cccccccCcccccchHHHH
Confidence 1100 1113456777788888887
No 32
>PHA02798 ankyrin-like protein; Provisional
Probab=99.94 E-value=2.2e-26 Score=241.40 Aligned_cols=200 Identities=15% Similarity=0.108 Sum_probs=178.7
Q ss_pred cccCccccCCCchHHHHHHHHc-----CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC--CcHHHHHHHHHcCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIA-----GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANIN 78 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~-----g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~--g~~~~v~~Ll~~ga~~~ 78 (499)
.|+++|.+|..|.||||+|+.+ +..+++++|+++|+++|.+|..|+||||+|+..+ ++.+++++|+++|++++
T Consensus 60 ~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn 139 (489)
T PHA02798 60 LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT 139 (489)
T ss_pred CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc
Confidence 4788999999999999999864 7899999999999999999999999999999862 37899999999999999
Q ss_pred ccCCCCCCCcHHHHHHHcCC---HHHHHHHHHCCCCCcccC-CCCCCHHHHHHHc----CCHHHHHHHHHccccccc---
Q 010851 79 AYRPGGRGGTPLHHAAKRGL---EPTVRLLLSCGANALVRN-DDCHTALGVARIK----GHINVVRAIESHICYFCG--- 147 (499)
Q Consensus 79 ~~~~d~~g~TpL~~A~~~g~---~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~----g~~~~v~~Ll~~g~~~~~--- 147 (499)
.+ |..|.||||+|+..++ .+++++|+++|++++..+ ..|.||||.++.. ++.+++++|+++|++++.
T Consensus 140 ~~--d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 140 LL--DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred cc--CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 98 8999999999999998 999999999999999885 5799999998764 478999999998875541
Q ss_pred ----------------------------------ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccC
Q 010851 148 ----------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIY 193 (499)
Q Consensus 148 ----------------------------------~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~ 193 (499)
+.+|..|+|||| +|+..++.+++++|+++|++++..+..|+++++
T Consensus 218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~-~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~ 296 (489)
T PHA02798 218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLY-YSVSHNNRKIFEYLLQLGGDINIITELGNTCLF 296 (489)
T ss_pred cccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHH-HHHHcCcHHHHHHHHHcCCcccccCCCCCcHHH
Confidence 146778999999 999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHH
Q 010851 194 PSLQDVQPRAVIALW 208 (499)
Q Consensus 194 ~~~~~~~~~~~~~l~ 208 (499)
.+........+..++
T Consensus 297 ~A~~~~~~~iv~~lL 311 (489)
T PHA02798 297 TAFENESKFIFNSIL 311 (489)
T ss_pred HHHHcCcHHHHHHHH
Confidence 999888776666554
No 33
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=2.9e-27 Score=227.58 Aligned_cols=188 Identities=23% Similarity=0.225 Sum_probs=129.9
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHH-cCCCCccc--------CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCC
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRS-QGASLEWM--------DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~--------d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
+.+|.|||.+||++|+.++|++|++ -++++... .-+|-+||-.|+.. ||.++|++|+++|+++|.. ..
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaA-GHl~vVk~L~~~ga~VN~t--T~ 115 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAA-GHLEVVKLLLRRGASVNDT--TR 115 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhcc-CcHHHHHHHHHhcCccccc--cc
Confidence 4456677777777777777777777 34444321 23566666655554 7777777777777777765 45
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
...|||--||.-||.++|++|+++|+|+++.|..|.|.||+|+.+||.+|+++|++.|+|++ .++..|.|+|| .++.
T Consensus 116 TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn--~ks~kGNTALH-~caE 192 (615)
T KOG0508|consen 116 TNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN--AKSYKGNTALH-DCAE 192 (615)
T ss_pred cCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc--hhcccCchHHH-hhhh
Confidence 55677777777777777777777777777777777777777777777777777777777777 77777777777 7777
Q ss_pred cCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
.|+.+++++|+.+|+.++... .|.+|+..+...+..+.+..++
T Consensus 193 sG~vdivq~Ll~~ga~i~~d~-~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 193 SGSVDIVQLLLKHGAKIDVDG-HGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred cccHHHHHHHHhCCceeeecC-CCCchHHHHhhhcchHHHHHHh
Confidence 777777777777777665444 3666766666666666665555
No 34
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=7.3e-27 Score=224.83 Aligned_cols=159 Identities=25% Similarity=0.306 Sum_probs=152.0
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
...+|-+||..|+..||+++||.|+++|+++|.......|||--||.. |+.+++++|+++|+|+++. |+.|.|.||+
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfD-G~leivKyLvE~gad~~Ia--nrhGhTcLmI 156 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFD-GHLEIVKYLVEHGADPEIA--NRHGHTCLMI 156 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhc-chhHHHHHHHHcCCCCccc--ccCCCeeEEe
Confidence 456789999999999999999999999999999998999999999998 9999999999999999999 8999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+.+||.+|+++|++.|+|+|.++..|.|+||.+++.|+++++++|+.+|+.+. +|..|.|||. .|+..|+.++++
T Consensus 157 a~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~---~d~~GmtPL~-~Aa~tG~~~iVe 232 (615)
T KOG0508|consen 157 ACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID---VDGHGMTPLL-LAAVTGHTDIVE 232 (615)
T ss_pred eeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee---ecCCCCchHH-HHhhhcchHHHH
Confidence 999999999999999999999999999999999999999999999999999875 7888999999 999999999999
Q ss_pred HHHhcC
Q 010851 173 VVIPCG 178 (499)
Q Consensus 173 ~Ll~~g 178 (499)
+|+...
T Consensus 233 ~L~~~~ 238 (615)
T KOG0508|consen 233 RLLQCE 238 (615)
T ss_pred HHhcCC
Confidence 999733
No 35
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=4.8e-27 Score=219.50 Aligned_cols=172 Identities=25% Similarity=0.373 Sum_probs=154.3
Q ss_pred CCCcccccCccccCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHHc----CCcHHHHHHHHHcCC
Q 010851 1 MGQSLNSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQG-ASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGA 75 (499)
Q Consensus 1 ~~~~l~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~Aa~~----~g~~~~v~~Ll~~ga 75 (499)
|+-.|-.+-+|.-|.+|+|+||||+.++|+++|+.||+.| +++|.+|.-|+||+|+|+.. ..+.++|..|.+.|
T Consensus 252 ls~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg- 330 (452)
T KOG0514|consen 252 LSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG- 330 (452)
T ss_pred cChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-
Confidence 3445556778889999999999999999999999999988 69999999999999999864 24578888888775
Q ss_pred CCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-ccccccccccccC
Q 010851 76 NINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYG 154 (499)
Q Consensus 76 ~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g 154 (499)
|+|.+- ...|+|+||+|+.+|+.++|+.||..|+|+|.+|.+|.|+||.|+++||.||+++||.. ++|+. +.|.+|
T Consensus 331 nVNaKA-sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s--LtD~Dg 407 (452)
T KOG0514|consen 331 DVNAKA-SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS--LTDVDG 407 (452)
T ss_pred Ccchhh-hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccce--eecCCC
Confidence 788773 67899999999999999999999999999999999999999999999999999999976 46887 999999
Q ss_pred CCHHHHHhhhcCCHHHHHHHHhc
Q 010851 155 PSFLEALAPQLMSRKIWVVVIPC 177 (499)
Q Consensus 155 ~t~Lh~~A~~~~~~~~~~~Ll~~ 177 (499)
.|+|. +|...|+.+|.-+|..+
T Consensus 408 STAl~-IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 408 STALS-IALEAGHREIAVMLYAH 429 (452)
T ss_pred chhhh-hHHhcCchHHHHHHHHH
Confidence 99999 99999999999888654
No 36
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=8e-26 Score=225.62 Aligned_cols=175 Identities=13% Similarity=-0.040 Sum_probs=151.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCc------ccCCCCChHHHHHHH--cCCcHHHHHHHHHcCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLE------WMDKEGKTPLIVACM--DSGLINVAKTLIELGANIN 78 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------~~d~~g~TpLh~Aa~--~~g~~~~v~~Ll~~ga~~~ 78 (499)
+.++|.++.+| +|+..+..|++++|+.+|+++| .++..++|+||+|+. . |+.++|++|+++||+++
T Consensus 72 ~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~-n~~eiV~~LI~~GADIn 145 (437)
T PHA02795 72 RDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAY-VEIDIVDFMVDHGAVIY 145 (437)
T ss_pred Ccchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcC-CCHHHHHHHHHCCCCCC
Confidence 45666666666 9999999999999999999998 788899999999998 6 89999999999999999
Q ss_pred ccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccc------CCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccc
Q 010851 79 AYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR------NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF 152 (499)
Q Consensus 79 ~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~------d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 152 (499)
.. ++.||||.|+..++.+++++|+++|++.... +..+.|++|.|...++.+++++|+++|++++ .+|.
T Consensus 146 ~~----~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN--~kD~ 219 (437)
T PHA02795 146 KI----ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN--QLDA 219 (437)
T ss_pred CC----CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC--cCCC
Confidence 75 4589999999999999999999999854222 2358899999999999999999999999999 9999
Q ss_pred cCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCc
Q 010851 153 YGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYP 194 (499)
Q Consensus 153 ~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~ 194 (499)
.|.|||| +|+..|+.+++++|+++|++++.++..|.++++.
T Consensus 220 ~G~TpLh-~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~ 260 (437)
T PHA02795 220 GGRTLLY-RAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDV 260 (437)
T ss_pred CCCCHHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 9999999 9999999999999999999865444333333333
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=3.8e-25 Score=244.84 Aligned_cols=167 Identities=15% Similarity=0.160 Sum_probs=156.2
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
.+.++.++||.||..|+.++++.|+++|+++|..|..|+||||+||.+ |+.+++++|+++|+++|.+ |.+|+||||+
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~-g~~~~v~~Ll~~gadin~~--d~~G~TpL~~ 597 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASK-GYEDCVLVLLKHACNVHIR--DANGNTALWN 597 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-ChHHHHHHHHhcCCCCCCc--CCCCCCHHHH
Confidence 455678999999999999999999999999999999999999999998 9999999999999999998 8899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+..|+.+++++|++.++..+ ...|.++||.|+..|+.+++++|+++|++++ .+|.+|+|||| +|+..|+.++++
T Consensus 598 A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin--~~d~~G~TpLh-~A~~~g~~~iv~ 672 (823)
T PLN03192 598 AISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVD--SEDHQGATALQ-VAMAEDHVDMVR 672 (823)
T ss_pred HHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHCCcHHHHH
Confidence 999999999999999887654 3457799999999999999999999999999 99999999999 999999999999
Q ss_pred HHHhcCCCCCCCCcc
Q 010851 173 VVIPCGTANPSKPLR 187 (499)
Q Consensus 173 ~Ll~~ga~~~~~~~~ 187 (499)
+|+++|++++..+..
T Consensus 673 ~Ll~~GAdv~~~~~~ 687 (823)
T PLN03192 673 LLIMNGADVDKANTD 687 (823)
T ss_pred HHHHcCCCCCCCCCC
Confidence 999999999877643
No 38
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=8.6e-25 Score=228.20 Aligned_cols=198 Identities=17% Similarity=0.084 Sum_probs=163.6
Q ss_pred Ccc-ccCCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC-CcHHHHHHHHHcCCCC--CccC
Q 010851 9 NQH-QQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANI--NAYR 81 (499)
Q Consensus 9 ~~~-~~d~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~-g~~~~v~~Ll~~ga~~--~~~~ 81 (499)
++| .+|.+|+||||+|+..| +.++|++||++|++++.+|..|+||||+|+..+ ++.|+|++|++.|++. +..
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~- 110 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT- 110 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc-
Confidence 666 78899999999999997 599999999999999999999999999999862 3799999999997655 555
Q ss_pred CCCCCCcHHHHHHH--cCCHHHHHHHHH-CCCCCcccC-----CCCCCHHHHHHHcCCHHHHHHHHHcccccccc-----
Q 010851 82 PGGRGGTPLHHAAK--RGLEPTVRLLLS-CGANALVRN-----DDCHTALGVARIKGHINVVRAIESHICYFCGW----- 148 (499)
Q Consensus 82 ~d~~g~TpL~~A~~--~g~~~~v~~Ll~-~ga~~~~~d-----~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~----- 148 (499)
+..+.+|||.++. +++.++|++|+. .+++++... ..|.+|++++...++.++|++|+++|++++|.
T Consensus 111 -~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~ 189 (672)
T PHA02730 111 -SNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSC 189 (672)
T ss_pred -cccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccc
Confidence 7779999999998 899999999997 668877653 37999999999999999999999999999642
Q ss_pred cccccC-CCHHHHHh------hhcCCHHHHHHHHhcCCCCCCCCcccccccCc--cccccChHHHHHHHH
Q 010851 149 LREFYG-PSFLEALA------PQLMSRKIWVVVIPCGTANPSKPLRFELVIYP--SLQDVQPRAVIALWK 209 (499)
Q Consensus 149 ~~~~~g-~t~Lh~~A------~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~--~~~~~~~~~~~~l~~ 209 (499)
..+..+ .|.|| +. ...++.+++++||++|++++.++..|++++|. +........+..|..
T Consensus 190 ~~~~~~c~~~l~-~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 190 MYDSDRCKNSLH-YYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cccCCccchhHH-HHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 233344 44555 22 46778999999999999999999999999984 333333455555544
No 39
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.92 E-value=7e-25 Score=237.19 Aligned_cols=230 Identities=22% Similarity=0.183 Sum_probs=169.6
Q ss_pred ccCccccCCCchHHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g-~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+.+.+..++.|.|++|+|+..| ..++...+++.|.++|..-..|.||||+|+.. |+.++++.|++.++..+.. ...
T Consensus 430 gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~-Gh~~~~~llle~~~~~~~~--~~~ 506 (1143)
T KOG4177|consen 430 GASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQE-GHTEVVQLLLEGGANDNLD--AKK 506 (1143)
T ss_pred CCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhcc-CCchHHHHhhhcCCccCcc--chh
Confidence 3445555666666666666666 55566666666666666666666666666655 6666666666666555544 455
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
|.|+||+|...++..+++.|+++|++++.++.+|+||||.|+..|+..+|++|+++|++++ .+++.|+|||| .|+..
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~--ak~~~G~TPLH-~Aa~~ 583 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN--AKDKLGYTPLH-QAAQQ 583 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc--ccCCCCCChhh-HHHHc
Confidence 6666666666666666666777788888999999999999999999999999999999999 99999999999 99999
Q ss_pred CCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCCCH
Q 010851 166 MSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDK 245 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~~~ 245 (499)
|+.+|+++|+++|+++|..+..+.++++++...+....+..+....... ........+..|.+|..++.+...+.
T Consensus 584 G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~-----~~~~~~~e~~~g~~p~~v~e~~~~~~ 658 (1143)
T KOG4177|consen 584 GHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP-----AATDPVKENRKGAVPEDVAEELDTDR 658 (1143)
T ss_pred ChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCcc-----ccccchhhhhcccChhhHHHHhhhhh
Confidence 9999999999999999999999999999998888765555433222111 11124556778999999888555555
Q ss_pred HH
Q 010851 246 HQ 247 (499)
Q Consensus 246 ~~ 247 (499)
..
T Consensus 659 ~~ 660 (1143)
T KOG4177|consen 659 QD 660 (1143)
T ss_pred hh
Confidence 43
No 40
>PHA02792 ankyrin-like protein; Provisional
Probab=99.92 E-value=2.8e-24 Score=222.06 Aligned_cols=105 Identities=10% Similarity=-0.118 Sum_probs=62.4
Q ss_pred HHHHHHcCCHHHHHHHHHcccccccccccccC--CCHHHHHhhhcCCH---HHHHHHHhcCCCCCCCCcccccccCcccc
Q 010851 123 LGVARIKGHINVVRAIESHICYFCGWLREFYG--PSFLEALAPQLMSR---KIWVVVIPCGTANPSKPLRFELVIYPSLQ 197 (499)
Q Consensus 123 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g--~t~Lh~~A~~~~~~---~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~ 197 (499)
++.|+..|+.++|++|+++|++++ .+|..| .|||| +|...+.. +++++|+++|++++.++..+.+++|.+..
T Consensus 343 ~~~Aa~~gn~eIVelLIs~GADIN--~kD~~g~~~TpLh-~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~ 419 (631)
T PHA02792 343 YFQKFDNRDPKVVEYILKNGNVVV--EDDDNIINIMPLF-PTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIE 419 (631)
T ss_pred HHHHHHcCCHHHHHHHHHcCCchh--hhcCCCCChhHHH-HHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHH
Confidence 344444455566666666666665 555443 46666 44444333 24566666666666666666666666665
Q ss_pred ccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 198 DVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 198 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
......+..++. .++.++.+|..|+|||++|..
T Consensus 420 ~~n~eivelLLs----------~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 420 SHSVSLVEWLID----------NGADINITTKYGSTCIGICVI 452 (631)
T ss_pred cCCHHHHHHHHH----------CCCCCCCcCCCCCCHHHHHHH
Confidence 555444333222 244588999999999999873
No 41
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=2.9e-24 Score=191.86 Aligned_cols=148 Identities=19% Similarity=0.174 Sum_probs=127.7
Q ss_pred CcccccCccccCCCchHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHH---HHHHHHHcCC
Q 010851 3 QSLNSMNQHQQRQSKDELLYQWVIAGDV----DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLIN---VAKTLIELGA 75 (499)
Q Consensus 3 ~~l~~~~~~~~d~~g~t~L~~Aa~~g~~----~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~---~v~~Ll~~ga 75 (499)
-+-++++.+..+.++.++||+|++.|+. +++++|+++|++++.+|..|+||||+|+.. |+.+ ++++|+++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~-g~~~~~~~i~~Ll~~Ga 84 (166)
T PHA02743 6 TAGNNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWY-DRANAVMKIELLVNMGA 84 (166)
T ss_pred CcccchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHh-CccCHHHHHHHHHHcCC
Confidence 3456677778888899999999999998 566677888999999999999999999987 6644 4889999999
Q ss_pred CCCccCCC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccc
Q 010851 76 NINAYRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFY 153 (499)
Q Consensus 76 ~~~~~~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 153 (499)
++|.+ + ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++ .++..
T Consensus 85 din~~--d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~ 160 (166)
T PHA02743 85 DINAR--ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD--DPLSI 160 (166)
T ss_pred CCCCC--CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcccC
Confidence 99988 6 579999999999999999999995 799999999999999999999999999999999999988 66665
Q ss_pred CC
Q 010851 154 GP 155 (499)
Q Consensus 154 g~ 155 (499)
|.
T Consensus 161 ~~ 162 (166)
T PHA02743 161 GL 162 (166)
T ss_pred Cc
Confidence 53
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.92 E-value=5.1e-24 Score=227.82 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=157.0
Q ss_pred HHHHHHHHHcCCCCcccCCCCChHHHHHHHc--CCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCH----HHHH
Q 010851 30 VDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLE----PTVR 103 (499)
Q Consensus 30 ~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~----~~v~ 103 (499)
++.||.|+.+|..++.+|..|+||||+|+.. .|+.+++++||+.|++++.+ +..|+||||+|+..|+. ++++
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~--~~~g~TpL~~Aa~~g~~~v~~~~~~ 89 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK--NWRQLTPLEEYTNSRHVKVNKDIAM 89 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc--CCCCCCHHHHHHHcCChhHHHHHHH
Confidence 5788999999999999999999999998543 26799999999999999988 89999999999999995 4568
Q ss_pred HHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHH-hhhcCCHHHHHHHHhcCCCCC
Q 010851 104 LLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL-APQLMSRKIWVVVIPCGTANP 182 (499)
Q Consensus 104 ~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~-A~~~~~~~~~~~Ll~~ga~~~ 182 (499)
+|++.+...+..+ ..+++|+|+..|+.++|++|+++|++++ .+|..|+||||.+ ++..++.+++++|+++|++++
T Consensus 90 ~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin--~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 90 ALLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLS--VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred HHHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCC--ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 8988765444433 2377888999999999999999999999 9999999999943 346889999999999999997
Q ss_pred CCCcccccc-cCccccccChHHHHHHHHh-------------hcCCCccCC-CCCceeeecCCCcchhHhHhhCCC
Q 010851 183 SKPLRFELV-IYPSLQDVQPRAVIALWKA-------------KIDEPKFHQ-PDPSLTIYDQATKIRYKFASANEG 243 (499)
Q Consensus 183 ~~~~~~~~~-l~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~-~~~~~~~~d~~g~tpl~~a~~~~~ 243 (499)
..+..+... .+...+.....++++++.. ..+..++.. .+.+++..|..|.||||+|+.+..
T Consensus 166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~ 241 (661)
T PHA02917 166 YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH 241 (661)
T ss_pred ccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC
Confidence 654322110 0011112222344443311 111112222 355699999999999999997665
No 43
>PHA02730 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=219.60 Aligned_cols=212 Identities=17% Similarity=0.114 Sum_probs=155.7
Q ss_pred cCCCchHHHH------HHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHH--HHHcCCcHHHHHHHHH------------
Q 010851 13 QRQSKDELLY------QWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIV--ACMDSGLINVAKTLIE------------ 72 (499)
Q Consensus 13 ~d~~g~t~L~------~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~--Aa~~~g~~~~v~~Ll~------------ 72 (499)
.+....|.|| .+...++.+++++||++|+++|.+|..|+||||+ |... |+.|++++|++
T Consensus 192 ~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~-~~~eiv~~Li~~~~~~~~~~~~~ 270 (672)
T PHA02730 192 DSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCST-IDIEIVKLLIKDVDTCSVYDDIS 270 (672)
T ss_pred cCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCc-ccHHHHHHHHhcccccccccccc
Confidence 3445556666 2356788889999999999888888889999985 3333 66888888888
Q ss_pred --------------------cCCCCCc--------------------cCCCCCCCc---------------------HHH
Q 010851 73 --------------------LGANINA--------------------YRPGGRGGT---------------------PLH 91 (499)
Q Consensus 73 --------------------~ga~~~~--------------------~~~d~~g~T---------------------pL~ 91 (499)
+|+|+.. . +..|.+ -||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~ 348 (672)
T PHA02730 271 QPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSY--DSREYNHYIIDNILKRFRQQDESIVQAMLI 348 (672)
T ss_pred chhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccc--cccccchhHHHHHHHhhhccchhHHHHHHH
Confidence 7888765 3 556654 677
Q ss_pred HHHHcC---CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCC----HHHHHHHHHccc--ccccccccccCCCHHHH--
Q 010851 92 HAAKRG---LEPTVRLLLSCGANALVRNDDCHTALGVARIKGH----INVVRAIESHIC--YFCGWLREFYGPSFLEA-- 160 (499)
Q Consensus 92 ~A~~~g---~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~g~--~~~~~~~~~~g~t~Lh~-- 160 (499)
.-...+ +.+++++|+++||+++.. ..|.||||+|+..++ .+++++|+++|+ +++ .+|..|+||||.
T Consensus 349 ~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN--~kd~~G~T~Lh~~i 425 (672)
T PHA02730 349 NYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN--HVSNNGRLCMYGLI 425 (672)
T ss_pred HHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc--ccccCCCchHhHHH
Confidence 777755 578889999999888874 788899998887774 788999988887 466 788888898882
Q ss_pred HhhhcC---------CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecC-C
Q 010851 161 LAPQLM---------SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQ-A 230 (499)
Q Consensus 161 ~A~~~~---------~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~-~ 230 (499)
++...+ ..+++++|+++|++++.++..+.++++++........+..|.. .++.++..|+ .
T Consensus 426 ~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~----------~GAdIN~~d~~~ 495 (672)
T PHA02730 426 LSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLE----------YGASVNTTSRSI 495 (672)
T ss_pred HHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHH----------CCCCCCCCCCcC
Confidence 222221 2356888888998888888888888888877666544443322 2344788886 5
Q ss_pred CcchhHhHhh
Q 010851 231 TKIRYKFASA 240 (499)
Q Consensus 231 g~tpl~~a~~ 240 (499)
|.||||+|+.
T Consensus 496 g~TaL~~Aa~ 505 (672)
T PHA02730 496 INTAIQKSSY 505 (672)
T ss_pred CcCHHHHHHH
Confidence 8999999875
No 44
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91 E-value=8.4e-25 Score=236.57 Aligned_cols=219 Identities=24% Similarity=0.217 Sum_probs=197.9
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCC-cHHHHHHHHHcCCCCCccCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g-~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
.+.+.+.+.+.|.||||.|+.+++..+|+.++++|++++.++..|+||+|+|+.. | ..+++..++++|+++|.. ..
T Consensus 396 ~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~-g~~~~~~~~l~~~g~~~n~~--s~ 472 (1143)
T KOG4177|consen 396 AGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKK-GRYLQIARLLLQYGADPNAV--SK 472 (1143)
T ss_pred ccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhc-ccHhhhhhhHhhcCCCcchh--cc
Confidence 3566888899999999999999999999999999999999999999999999988 7 889999999999999998 78
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
.|.||||+|+..||.+++..|++.++..+.....|.++||+|...++..+++.++++|++++ .++.+|.|||| .|+.
T Consensus 473 ~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~--~~~~r~~TpLh-~A~~ 549 (1143)
T KOG4177|consen 473 QGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVD--LRTGRGYTPLH-VAVH 549 (1143)
T ss_pred ccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCcee--hhcccccchHH-HHHh
Confidence 99999999999999999999999998888888899999999999999999999999999998 99999999999 9999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
.|+.+++++||++|++.+.++..+.+|+|.+...+....+..|.+. ++.+|..|..|.|||++|+.
T Consensus 550 ~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~----------GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH----------GASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred cCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc----------CCCCCcccccCcchhHHHHH
Confidence 9999999999999999999999999999999998865555543333 45589999999999999994
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=1.6e-24 Score=189.46 Aligned_cols=182 Identities=19% Similarity=0.153 Sum_probs=151.1
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
.+...|.+|+.+++.|+-.|+...++.+|.+|+..|..+-.+++|+++++.. .+.+.+.+|.+. .+|.. |..|.|
T Consensus 88 ~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhq-l~L~~~~~~~~n--~VN~~--De~GfT 162 (296)
T KOG0502|consen 88 AIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQ-LHLDVVDLLVNN--KVNAC--DEFGFT 162 (296)
T ss_pred CCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHH-HHHHHHHHHhhc--cccCc--cccCch
Confidence 3445677789999999988888888888988888888888889999998876 777766665554 55665 788999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCH
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSR 168 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~ 168 (499)
||+||+.+|++.+|++||+.|+|++...+...++|++|...|..+||++|+.++.|+| ..|.+|-|||- +|+..|+.
T Consensus 163 pLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVN--vyDwNGgTpLl-yAvrgnhv 239 (296)
T KOG0502|consen 163 PLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVN--VYDWNGGTPLL-YAVRGNHV 239 (296)
T ss_pred HhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc--eeccCCCceee-eeecCChH
Confidence 9999999999999999999999988888888889999999999999999999988888 88888999988 88899999
Q ss_pred HHHHHHHhcCCCCCCCCcccccccCccccc
Q 010851 169 KIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 169 ~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 198 (499)
+|++.||..|++++..+..|...+..+..-
T Consensus 240 kcve~Ll~sGAd~t~e~dsGy~~mdlAVal 269 (296)
T KOG0502|consen 240 KCVESLLNSGADVTQEDDSGYWIMDLAVAL 269 (296)
T ss_pred HHHHHHHhcCCCcccccccCCcHHHHHHHh
Confidence 999999999998888887776655554433
No 46
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=2.3e-24 Score=188.53 Aligned_cols=169 Identities=24% Similarity=0.184 Sum_probs=152.7
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
++...|..+-.+.+|+.+++...+++.+..|.+. .+|..|..|.|||+||+.+ |++++|++||+.|++++.. .+.
T Consensus 118 N~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~-G~i~vV~fLL~~GAdp~~l--gk~ 192 (296)
T KOG0502|consen 118 NGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAK-GHIPVVQFLLNSGADPDAL--GKY 192 (296)
T ss_pred ccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhc-CchHHHHHHHHcCCChhhh--hhh
Confidence 3455667788899999999999999888777665 5778999999999999998 9999999999999999998 788
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
..++|++|.+.|..++|++||.++.|+|..|.+|-|||-||++.||.+|++.|+..|++++ ..+..|.+++. +|+..
T Consensus 193 resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t--~e~dsGy~~md-lAVal 269 (296)
T KOG0502|consen 193 RESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT--QEDDSGYWIMD-LAVAL 269 (296)
T ss_pred hhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcc--cccccCCcHHH-HHHHh
Confidence 8899999999999999999999999999999999999999999999999999999999999 89999999999 89999
Q ss_pred CCHHHHHHHHhcCCCCCC
Q 010851 166 MSRKIWVVVIPCGTANPS 183 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~ 183 (499)
|+. +++..|++.+....
T Consensus 270 Gyr-~Vqqvie~h~lkl~ 286 (296)
T KOG0502|consen 270 GYR-IVQQVIEKHALKLC 286 (296)
T ss_pred hhH-HHHHHHHHHHHHHh
Confidence 887 77777777665433
No 47
>PHA02741 hypothetical protein; Provisional
Probab=99.90 E-value=3.1e-23 Score=186.06 Aligned_cols=132 Identities=22% Similarity=0.269 Sum_probs=94.3
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCChHHHHHHHcCCc----HHHHHHHHHcCCCCCc
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRS------QGASLEWMDKEGKTPLIVACMDSGL----INVAKTLIELGANINA 79 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~------~g~~~~~~d~~g~TpLh~Aa~~~g~----~~~v~~Ll~~ga~~~~ 79 (499)
.+.+|..|.|+||+|+..|+.++|+.|+. .|++++.+|..|+||||+|+.. |+ .+++++|+++|+++|.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~-g~~~~~~~ii~~Ll~~gadin~ 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEK-HEAQLAAEIIDHLIELGADINA 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHc-CChHHHHHHHHHHHHcCCCCCC
Confidence 34566777777777777777777777643 2466777777777777777775 65 4677777777777776
Q ss_pred cCCCC-CCCcHHHHHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 80 YRPGG-RGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 80 ~~~d~-~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
+ +. .|+||||+|+..++.+++++|+. .|++++..|.+|+||||+|+..++.+++++|++.++.
T Consensus 93 ~--~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 93 Q--EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred C--CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 6 43 67777777777777777777776 4777777777777777777777777777777776543
No 48
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.90 E-value=6.3e-23 Score=197.42 Aligned_cols=157 Identities=22% Similarity=0.175 Sum_probs=136.4
Q ss_pred ccccCCCchH-HHHHHHHcCCHHHHHHHHHcCCCCcccC----CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCC
Q 010851 10 QHQQRQSKDE-LLYQWVIAGDVDAIRALRSQGASLEWMD----KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 10 ~~~~d~~g~t-~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d----~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
...+|+.|.| +||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+.. ++.+++++|+++|+++|.++ +.
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~-~~~eivklLL~~GADVN~~~-~~ 102 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDC-DNDDAAKLLIRYGADVNRYA-EE 102 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcCccc-CC
Confidence 3456777766 5666777899999999999999999874 5899999999997 99999999999999999862 45
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
.|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++.++... ..+..+.+|++ +.
T Consensus 103 ~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~-- 172 (300)
T PHA02884 103 AKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN-------EISNFYKHPKK-IL-- 172 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC-------cccccccChhh-hh--
Confidence 799999999999999999999999999999999999999999999999988666532 24567889998 43
Q ss_pred cCCHHHHHHHHhcCC
Q 010851 165 LMSRKIWVVVIPCGT 179 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga 179 (499)
++.+++++|+.++.
T Consensus 173 -~n~ei~~~Lish~v 186 (300)
T PHA02884 173 -INFDILKILVSHFI 186 (300)
T ss_pred -ccHHHHHHHHHHHH
Confidence 46899999999987
No 49
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-23 Score=213.22 Aligned_cols=219 Identities=22% Similarity=0.176 Sum_probs=187.0
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
.-+.|.+|.+|.|+||.|+.+|+.+++++|+++.+-++..|..|.+|||+|++. |+.+++++|+.++..+|.. +..|
T Consensus 39 sds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~-g~~e~vkmll~q~d~~na~--~~e~ 115 (854)
T KOG0507|consen 39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWN-GNLEIVKMLLLQTDILNAV--NIEN 115 (854)
T ss_pred CccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhc-CcchHHHHHHhcccCCCcc--cccC
Confidence 346778899999999999999999999999999999999999999999999998 9999999999999999998 8999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc------cccccccCCCHHHH
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC------GWLREFYGPSFLEA 160 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~~~g~t~Lh~ 160 (499)
.||||+|+..||.++|.+|+.+|+|+-.+|..+.|+|.+|++.|..++|+.|++...... ...++..+-++||
T Consensus 116 ~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH- 194 (854)
T KOG0507|consen 116 ETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH- 194 (854)
T ss_pred cCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc-
Confidence 999999999999999999999999999999999999999999999999999998732221 1245667888999
Q ss_pred HhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 161 LAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+|+++|+.++++.|++.|.++|..... .+++|.+..-++...+..+++. +-...++|.+|+|.|+....
T Consensus 195 laakngh~~~~~~ll~ag~din~~t~~-gtalheaalcgk~evvr~ll~~----------gin~h~~n~~~qtaldil~d 263 (854)
T KOG0507|consen 195 LAAKNGHVECMQALLEAGFDINYTTED-GTALHEAALCGKAEVVRFLLEI----------GINTHIKNQHGQTALDIIID 263 (854)
T ss_pred hhhhcchHHHHHHHHhcCCCccccccc-chhhhhHhhcCcchhhhHHHhh----------ccccccccccchHHHHHHHh
Confidence 999999999999999999999987743 3555555544443333333333 22367889999999998884
No 50
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.90 E-value=4.1e-23 Score=184.47 Aligned_cols=143 Identities=15% Similarity=0.170 Sum_probs=130.3
Q ss_pred cCCCCcccCCCCChHHHHHHHcCCcH----HHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHH---HHHHHHCCCC
Q 010851 39 QGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPT---VRLLLSCGAN 111 (499)
Q Consensus 39 ~g~~~~~~d~~g~TpLh~Aa~~~g~~----~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~---v~~Ll~~ga~ 111 (499)
+|++++..+.++.++||+||+. |+. +++++|++.|++++.+ |..|+||||+|+..|+.++ +++|+++|++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~-g~~~~l~~~~~~l~~~g~~~~~~--d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad 85 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRT-GNIYELMEVAPFISGDGHLLHRY--DHHGRQCTHMVAWYDRANAVMKIELLVNMGAD 85 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHc-CCHHHHHHHHHHHhhcchhhhcc--CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence 5678888999999999999998 776 6777888999999988 8899999999999988654 8999999999
Q ss_pred CcccC-CCCCCHHHHHHHcCCHHHHHHHHH-cccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcc
Q 010851 112 ALVRN-DDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLR 187 (499)
Q Consensus 112 ~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~ 187 (499)
++.+| ..|.||||+|+..|+.+++++|+. .|++++ .+|..|+|||| +|+..++.+++++|+++|++.+.++..
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~--~~d~~g~tpL~-~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG--AINYQHETAYH-IAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc--CcCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 99998 589999999999999999999995 799998 89999999999 999999999999999999999887754
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89 E-value=8.9e-23 Score=226.05 Aligned_cols=149 Identities=21% Similarity=0.140 Sum_probs=140.1
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
.+++.|.+|.+|+||||+|+..|+.++++.|+++|+++|.+|.+|+||||+|+.. |+.+++++|++.++..+ ...
T Consensus 547 ~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~-g~~~iv~~L~~~~~~~~----~~~ 621 (823)
T PLN03192 547 AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA-KHHKIFRILYHFASISD----PHA 621 (823)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh-CCHHHHHHHHhcCcccC----ccc
Confidence 4678899999999999999999999999999999999999999999999999997 99999999999887766 346
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccC-CCHHHHHh
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG-PSFLEALA 162 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g-~t~Lh~~A 162 (499)
|.++||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+++|++++ ..|..| .||++ ++
T Consensus 622 ~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~--~~~~~g~~t~~~-l~ 696 (823)
T PLN03192 622 AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD--KANTDDDFSPTE-LR 696 (823)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC--CCCCCCCCCHHH-HH
Confidence 7799999999999999999999999999999999999999999999999999999999999 888888 99988 44
No 52
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=1.8e-22 Score=222.16 Aligned_cols=216 Identities=16% Similarity=0.137 Sum_probs=165.0
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCChHHH-HHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHH
Q 010851 15 QSKDELLYQWVIAGDVDAIRALRSQ--GASLEWMDKEGKTPLI-VACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~TpLh-~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
..++..|+.|++.|+.+.|+.++++ +.++|..|..|+|||| .|+. +++.+++++|+++|+ . +..|.||||
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~-~~~~eiv~lLl~~g~----~--~~~G~T~Lh 87 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIE-NENLELTELLLNLSC----R--GAVGDTLLH 87 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHh-cChHHHHHHHHhCCC----C--CCcChHHHH
Confidence 4568999999999999999999998 8999999999999999 6665 499999999999998 3 678999999
Q ss_pred HHHHcC---CHHHHHHHHHCCCC------C----cccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc-------
Q 010851 92 HAAKRG---LEPTVRLLLSCGAN------A----LVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE------- 151 (499)
Q Consensus 92 ~A~~~g---~~~~v~~Ll~~ga~------~----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~------- 151 (499)
.|+..+ ...++++++..+.+ + ...+..|.||||+|+.+|+.++|++|+++|++++ .++
T Consensus 88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~--~~~~~~~~~~ 165 (743)
T TIGR00870 88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP--ARACGDFFVK 165 (743)
T ss_pred HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC--cCcCCchhhc
Confidence 998732 22344445544422 1 1123579999999999999999999999999998 432
Q ss_pred -------ccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHH--------HHHHHHhhcCCCc
Q 010851 152 -------FYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRA--------VIALWKAKIDEPK 216 (499)
Q Consensus 152 -------~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~--------~~~l~~~~~~~~~ 216 (499)
..|.|||| +|+..++.+++++|+++|+|++.++..+.+++|.+......+. ...++......
T Consensus 166 ~~~~~~~~~g~tpL~-~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~-- 242 (743)
T TIGR00870 166 SQGVDSFYHGESPLN-AAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK-- 242 (743)
T ss_pred CCCCCcccccccHHH-HHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc--
Confidence 36899999 9999999999999999999999999889999988876642111 11111111000
Q ss_pred cCCCCCceeeecCCCcchhHhHhhCC
Q 010851 217 FHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 217 ~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
........++.|+.|.|||++|+...
T Consensus 243 ~~~~~el~~i~N~~g~TPL~~A~~~g 268 (743)
T TIGR00870 243 LRDSKELEVILNHQGLTPLKLAAKEG 268 (743)
T ss_pred cCChHhhhhhcCCCCCCchhhhhhcC
Confidence 00111123778999999999999533
No 53
>PHA02741 hypothetical protein; Provisional
Probab=99.88 E-value=4.8e-22 Score=178.34 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=124.4
Q ss_pred HHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHH------cCCCCCccCCCCCCCcHHHHHHHcCC----H
Q 010851 30 VDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIE------LGANINAYRPGGRGGTPLHHAAKRGL----E 99 (499)
Q Consensus 30 ~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~------~ga~~~~~~~d~~g~TpL~~A~~~g~----~ 99 (499)
..+++.++ +.+|..|.||||+|+.. |+.+++++|+. .|++++.+ |..|+||||+|+..|+ .
T Consensus 7 ~~~~~~~~------~~~~~~g~t~Lh~Aa~~-g~~~~v~~l~~~~~~~~~ga~in~~--d~~g~T~Lh~A~~~g~~~~~~ 77 (169)
T PHA02741 7 MTCLEEMI------AEKNSEGENFFHEAARC-GCFDIIARFTPFIRGDCHAAALNAT--DDAGQMCIHIAAEKHEAQLAA 77 (169)
T ss_pred HHHHHHHh------hccccCCCCHHHHHHHc-CCHHHHHHHHHHhccchhhhhhhcc--CCCCCcHHHHHHHcCChHHHH
Confidence 34455554 35788999999999998 99999999864 36889988 8899999999999999 5
Q ss_pred HHHHHHHHCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHH-cccccccccccccCCCHHHHHhhhcCCHHHHHHHHhc
Q 010851 100 PTVRLLLSCGANALVRND-DCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (499)
Q Consensus 100 ~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ 177 (499)
+++++|+++|++++.++. .|+||||+|+..++.+++++|+. .|++++ .+|.+|+|||| +|...++.+++++|++.
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~--~~n~~g~tpL~-~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH--FCNADNKSPFE-LAIDNEDVAMMQILREI 154 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--cCCCCCCCHHH-HHHHCCCHHHHHHHHHH
Confidence 899999999999999985 99999999999999999999998 599998 89999999999 99999999999999998
Q ss_pred CCCC
Q 010851 178 GTAN 181 (499)
Q Consensus 178 ga~~ 181 (499)
++..
T Consensus 155 ~~~~ 158 (169)
T PHA02741 155 VATS 158 (169)
T ss_pred HHHh
Confidence 7643
No 54
>PHA02792 ankyrin-like protein; Provisional
Probab=99.88 E-value=9.8e-22 Score=203.29 Aligned_cols=181 Identities=14% Similarity=0.064 Sum_probs=156.4
Q ss_pred CccccCCCchHHHHHHHHcC-------CHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCC--cHHHHHHHHHc------
Q 010851 9 NQHQQRQSKDELLYQWVIAG-------DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG--LINVAKTLIEL------ 73 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g-------~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g--~~~~v~~Ll~~------ 73 (499)
..|.+|+.|.||||+|+..+ +.++++.||++|++++.+|..|.||||+|+.+ . ..|++++|+..
T Consensus 167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~-~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDK-CDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHc-ccchHHHHHHHHhccccccc
Confidence 45688999999999999999 89999999999999999999999999999987 5 56777776642
Q ss_pred --------------------------------------------------------------------------------
Q 010851 74 -------------------------------------------------------------------------------- 73 (499)
Q Consensus 74 -------------------------------------------------------------------------------- 73 (499)
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence
Q ss_pred -----CCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCC--CCHHHHHHHcCCH---HHHHHHHHccc
Q 010851 74 -----GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDC--HTALGVARIKGHI---NVVRAIESHIC 143 (499)
Q Consensus 74 -----ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g--~tpL~~A~~~g~~---~~v~~Ll~~g~ 143 (499)
|++++ ...+...++.|+..|+.++|++|+++|++++.+|..| .||||+|...... +++++|+++|+
T Consensus 326 ~LId~Ga~~~----r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 326 CMIDEGATLY----RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHCCCccc----cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 11111 1124567899999999999999999999999998775 6999998876654 46899999999
Q ss_pred ccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcccc
Q 010851 144 YFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQ 197 (499)
Q Consensus 144 ~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~ 197 (499)
+++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++.+..
T Consensus 402 DIN--~kD~~G~TPLh-~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 402 DIN--KIDKHGRSILY-YCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred ccc--cccccCcchHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999 99999999999 9999999999999999999999999999999998764
No 55
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=2.6e-22 Score=177.41 Aligned_cols=132 Identities=20% Similarity=0.153 Sum_probs=108.1
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCC-------CCcccCCCCChHHHHHHHcCCcH---HHHHHHHHcCCCCCc
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-------SLEWMDKEGKTPLIVACMDSGLI---NVAKTLIELGANINA 79 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-------~~~~~d~~g~TpLh~Aa~~~g~~---~~v~~Ll~~ga~~~~ 79 (499)
.+.+|.+|.||||+|++.|+.. +.++.++. .++.+|..|+||||+|+.. |+. +++++|+++|++++.
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~-~~~~~~e~v~~Ll~~gadin~ 86 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNP-DKADPQEKLKLLMEWGADING 86 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeeccc-CchhHHHHHHHHHHcCCCccc
Confidence 4567888999999999999843 33322221 2345688999999999987 765 568899999999998
Q ss_pred cCCC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 80 YRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 80 ~~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
+ + ..|.||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 87 ~--~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 87 K--ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred c--CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7 5 589999999999999999999997 489999999999999999999999999999999988753
No 56
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87 E-value=3.6e-22 Score=196.47 Aligned_cols=187 Identities=23% Similarity=0.228 Sum_probs=148.9
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 87 (499)
.+.+..+.+|.|+||.++...+.++|++|+++|++||..|..|+||||.|+.. |+..++++|+.+|+++... +.+|.
T Consensus 64 a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaasc-g~~~i~~~li~~gA~~~av--Nsdg~ 140 (527)
T KOG0505|consen 64 ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASC-GYLNIVEYLIQHGANLLAV--NSDGN 140 (527)
T ss_pred CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccc-ccHHHHHHHHHhhhhhhhc--cCCCC
Confidence 55677777888888888888888888888888888888888888888888766 8888888888888877766 55555
Q ss_pred cHHHHHHHc-------------C-CHH------------HHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 88 TPLHHAAKR-------------G-LEP------------TVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 88 TpL~~A~~~-------------g-~~~------------~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
.|+-++..- | .++ =++..+..|.+.+..+..|-|.||.|+.+|..++.++|+++
T Consensus 141 ~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a 220 (527)
T KOG0505|consen 141 MPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQA 220 (527)
T ss_pred CccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHh
Confidence 554332211 1 011 12233346777777887899999999999999999999999
Q ss_pred ccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccC
Q 010851 142 ICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (499)
Q Consensus 142 g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~ 200 (499)
|.+++ .+|.+|||||| +|+.++..+++++|+++|++.+.....+++++-....+..
T Consensus 221 g~~~~--~~D~dgWtPlH-AAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 221 GYSVN--IKDYDGWTPLH-AAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEEEL 276 (527)
T ss_pred ccCcc--cccccCCCccc-HHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhhhH
Confidence 99999 99999999999 9999999999999999999999999999999887765544
No 57
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.86 E-value=2.5e-21 Score=213.26 Aligned_cols=197 Identities=15% Similarity=0.073 Sum_probs=157.9
Q ss_pred ccCccccCCCchHHHH-HHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHc--CCcHHHHHHHHHcCCC------C
Q 010851 7 SMNQHQQRQSKDELLY-QWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGAN------I 77 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~-~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~------~ 77 (499)
+.++|..|..|+|||| .|+.+++.++++.|+++|+ .+..|.||||+|+.. .+...++++++..+.+ +
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 5788889999999999 8889999999999999987 678899999999972 1223344444444422 1
Q ss_pred Ccc--CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC--------------CCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 78 NAY--RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN--------------DDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 78 ~~~--~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
+.. +....|.||||+|+.+|+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 111 013469999999999999999999999999998653 3589999999999999999999999
Q ss_pred ccccccccccccCCCHHHHHhhhcC---------CHHHHHHHHhcCCCC-------CCCCcccccccCccccccChHHHH
Q 010851 142 ICYFCGWLREFYGPSFLEALAPQLM---------SRKIWVVVIPCGTAN-------PSKPLRFELVIYPSLQDVQPRAVI 205 (499)
Q Consensus 142 g~~~~~~~~~~~g~t~Lh~~A~~~~---------~~~~~~~Ll~~ga~~-------~~~~~~~~~~l~~~~~~~~~~~~~ 205 (499)
|++++ .+|..|+|||| +|+..+ ..++.+++++.++.. +..+..+.++++.+...+....+.
T Consensus 198 gadin--~~d~~g~T~Lh-~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~ 274 (743)
T TIGR00870 198 PADIL--TADSLGNTLLH-LLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFR 274 (743)
T ss_pred Ccchh--hHhhhhhHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHH
Confidence 99999 99999999999 787775 234667777776654 455778899999999888887777
Q ss_pred HHHHh
Q 010851 206 ALWKA 210 (499)
Q Consensus 206 ~l~~~ 210 (499)
.++..
T Consensus 275 lLL~~ 279 (743)
T TIGR00870 275 LKLAI 279 (743)
T ss_pred HHHHH
Confidence 76653
No 58
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.85 E-value=2.5e-21 Score=171.11 Aligned_cols=132 Identities=17% Similarity=0.124 Sum_probs=112.9
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCC-------CCccCCCCCCCcHHHHHHHcCCH---HHHHHHHHCCCCC
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN-------INAYRPGGRGGTPLHHAAKRGLE---PTVRLLLSCGANA 112 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~-------~~~~~~d~~g~TpL~~A~~~g~~---~~v~~Ll~~ga~~ 112 (499)
.+..|..|.||||+|++. |+ ++++++..+.. ++.+ |..|+||||+|+..|+. +++++|++.|+++
T Consensus 10 ~~~~d~~g~tpLh~A~~~-g~--~~~l~~~~~~~~~~~~~~~~~~--d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi 84 (154)
T PHA02736 10 ASEPDIEGENILHYLCRN-GG--VTDLLAFKNAISDENRYLVLEY--NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI 84 (154)
T ss_pred HHhcCCCCCCHHHHHHHh-CC--HHHHHHHHHHhcchhHHHHHHh--cCCCCEEEEeecccCchhHHHHHHHHHHcCCCc
Confidence 456788999999999998 76 34444433322 2234 78899999999999987 4689999999999
Q ss_pred cccC-CCCCCHHHHHHHcCCHHHHHHHHHc-ccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCC
Q 010851 113 LVRN-DDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANP 182 (499)
Q Consensus 113 ~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~ 182 (499)
+.++ ..|.||||+|+..|+.+++++|+.+ |++++ .+|..|+|||| +|+..++.+++++|+.+|++.+
T Consensus 85 n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n--~~~~~g~tpL~-~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 85 NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME--ILNYAFKTPYY-VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc--cccCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCC
Confidence 9998 4999999999999999999999984 89998 99999999999 9999999999999999998764
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85 E-value=1.2e-20 Score=159.43 Aligned_cols=143 Identities=22% Similarity=0.219 Sum_probs=125.9
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHc
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~ 96 (499)
.-.+.+|+..+.+..|+.||+..++ +|.+|.+|+||||-|+.+ |+.+||+.|+..|++++.+ ...||||||-|+.-
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn-~h~div~~ll~~gAn~~a~--T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYN-GHLDIVHELLLSGANKEAK--TNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhc-CchHHHHHHHHccCCcccc--cccCccchhhhhcc
Confidence 4568999999999999999997764 899999999999999987 9999999999999999999 88999999999999
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHH-cccccccccccccCCCHHHHHhhhcC
Q 010851 97 GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI-NVVRAIES-HICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 97 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~-~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
++.+++.+||.+|+|++.......||||+|+...+. ..+++|+. .+.+.- .++..+.||+. +|-+.+
T Consensus 141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg--~~nn~eeta~~-iARRT~ 209 (228)
T KOG0512|consen 141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG--LKNNLEETAFD-IARRTS 209 (228)
T ss_pred cchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChh--hhcCccchHHH-HHHHhh
Confidence 999999999999999999999999999999987765 44555543 344444 78899999999 776654
No 60
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.85 E-value=3.5e-21 Score=189.53 Aligned_cols=153 Identities=25% Similarity=0.304 Sum_probs=130.6
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHH------------cCCc-HH-------
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACM------------DSGL-IN------- 65 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~------------~~g~-~~------- 65 (499)
.+.++|.+|.+|+||||.|+-.|+..++++|+.+|+++-..|.+|..|+-++.. ..|- ++
T Consensus 95 ~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e 174 (527)
T KOG0505|consen 95 NGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEE 174 (527)
T ss_pred hcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhH
Confidence 357889999999999999999999999999999999998888888777544311 1010 11
Q ss_pred -----HHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010851 66 -----VAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (499)
Q Consensus 66 -----~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 140 (499)
=++..+..|...++. +..|.|.||.|+.+|..++.++|+.+|.+++.+|.+||||||.|+..|..++.++|++
T Consensus 175 ~~ml~D~~q~l~~G~~~d~~--~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~ 252 (527)
T KOG0505|consen 175 QTMLDDARQWLNAGAELDAR--HARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVE 252 (527)
T ss_pred HHHHHHHHHHHhcccccccc--ccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHH
Confidence 133344578888888 5559999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCHHHHHhh
Q 010851 141 HICYFCGWLREFYGPSFLEALAP 163 (499)
Q Consensus 141 ~g~~~~~~~~~~~g~t~Lh~~A~ 163 (499)
+|++++ .+...|.|||. +|.
T Consensus 253 ~ga~~d--~~t~~g~~p~d-v~d 272 (527)
T KOG0505|consen 253 HGADMD--AKTKMGETPLD-VAD 272 (527)
T ss_pred hhcccc--hhhhcCCCCcc-chh
Confidence 999999 89999999999 554
No 61
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=6.9e-21 Score=178.45 Aligned_cols=155 Identities=19% Similarity=0.227 Sum_probs=135.3
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcC-CCCCccCCCCCCCcHHHHHHHc-----CCHHHHHHHHHCCCCCcccC
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGRGGTPLHHAAKR-----GLEPTVRLLLSCGANALVRN 116 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~g-a~~~~~~~d~~g~TpL~~A~~~-----g~~~~v~~Ll~~ga~~~~~d 116 (499)
+|.-|.+|+|+||||+.+ ++.++|+.||+.| +++|.+ ++-|+||+|+++.. .+.++|..|...| |+|++-
T Consensus 261 VNlaDsNGNTALHYsVSH-aNF~VV~~LLDSgvC~VD~q--NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSH-ANFDVVSILLDSGVCDVDQQ--NRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred hhhhcCCCCeeeeeeecc-cchHHHHHHhccCccccccc--ccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 678999999999999998 8899999999987 689988 89999999999875 4678899998876 555543
Q ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcc
Q 010851 117 -DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPS 195 (499)
Q Consensus 117 -~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~ 195 (499)
..|+|+||+|+.+|+.++|+.||..|+|+| .+|.+|.|+|+ +|+..|+.+|+++||....
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVN--iQDdDGSTALM-CA~EHGhkEivklLLA~p~---------------- 397 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVN--IQDDDGSTALM-CAAEHGHKEIVKLLLAVPS---------------- 397 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCc--cccCCccHHHh-hhhhhChHHHHHHHhccCc----------------
Confidence 689999999999999999999999999999 99999999999 9999999999999986442
Q ss_pred ccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCCCHH
Q 010851 196 LQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKH 246 (499)
Q Consensus 196 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~~~~ 246 (499)
.++...|.+|.|+|.+|.++.+...
T Consensus 398 --------------------------cd~sLtD~DgSTAl~IAleagh~eI 422 (452)
T KOG0514|consen 398 --------------------------CDISLTDVDGSTALSIALEAGHREI 422 (452)
T ss_pred --------------------------ccceeecCCCchhhhhHHhcCchHH
Confidence 1267789999999999997544433
No 62
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84 E-value=4.8e-20 Score=177.51 Aligned_cols=132 Identities=15% Similarity=0.160 Sum_probs=115.5
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCC--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccc-CCCC
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRP--GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR-NDDC 119 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~--d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g 119 (499)
+..+|..|+|+++++|...|+.+++++|+++|+++|.++. +..|.||||+|+..++.+++++|+++|++++.+ +..|
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 3457888887666555555899999999999999998732 468999999999999999999999999999986 4689
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhc
Q 010851 120 HTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (499)
Q Consensus 120 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ 177 (499)
.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++.++...
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin--~kd~~G~TpL~-~A~~~~~~~~~~~~~~~ 159 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADIN--IQTNDMVTPIE-LALMICNNFLAFMICDN 159 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHhCChhHHHHhcCC
Confidence 999999999999999999999999999 89999999999 89888888887666543
No 63
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=7.1e-20 Score=166.55 Aligned_cols=116 Identities=28% Similarity=0.348 Sum_probs=79.1
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
+.|.-|..|.+|||||++.|+..+|+.||.+|+.+|.+|....||||+|+.+ ||.++|+.||++.+|+|.. +..|.|
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaah-ghrdivqkll~~kadvnav--nehgnt 102 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH-GHRDIVQKLLSRKADVNAV--NEHGNT 102 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc-ccHHHHHHHHHHhcccchh--hccCCC
Confidence 4455566666777777777777777777777776666666666777777666 6667777777777777766 666777
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR 127 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 127 (499)
||||||.-|...+.+-|+..|+.+++.|++|.|||..|-
T Consensus 103 plhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 103 PLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred chhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 777777777666667777777666666777777766553
No 64
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=4.4e-20 Score=167.88 Aligned_cols=159 Identities=23% Similarity=0.286 Sum_probs=136.8
Q ss_pred HHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHH
Q 010851 22 YQWVIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (499)
Q Consensus 22 ~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~ 100 (499)
+--++.|+.-.|+..|+ ..-|+|.-|..|.+|||+||+. |+..+++.||..|+.+|.. +....||||+|+..||-+
T Consensus 5 f~wcregna~qvrlwld~tehdln~gddhgfsplhwaake-gh~aivemll~rgarvn~t--nmgddtplhlaaahghrd 81 (448)
T KOG0195|consen 5 FGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKE-GHVAIVEMLLSRGARVNST--NMGDDTPLHLAAAHGHRD 81 (448)
T ss_pred hhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhc-ccHHHHHHHHhcccccccc--cCCCCcchhhhhhcccHH
Confidence 33466677666666665 5578899999999999999986 9999999999999999998 778889999999999999
Q ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCC
Q 010851 101 TVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA 180 (499)
Q Consensus 101 ~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~ 180 (499)
+|+.||+..+|+|..|..|.||||||+..|...+.+-|+..|+.++ ..+++|.|||. -|.-.-...+.++.-++|-.
T Consensus 82 ivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~--icnk~g~tpld-kakp~l~~~l~e~aek~gq~ 158 (448)
T KOG0195|consen 82 IVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN--ICNKKGMTPLD-KAKPMLKNTLLEIAEKHGQS 158 (448)
T ss_pred HHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceee--ecccCCCCchh-hhchHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999 99999999999 55433334455555577877
Q ss_pred CCCCCc
Q 010851 181 NPSKPL 186 (499)
Q Consensus 181 ~~~~~~ 186 (499)
++..++
T Consensus 159 ~nripf 164 (448)
T KOG0195|consen 159 PNRIPF 164 (448)
T ss_pred CCcccc
Confidence 776554
No 65
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.79 E-value=1.6e-19 Score=183.61 Aligned_cols=178 Identities=18% Similarity=0.108 Sum_probs=158.1
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHH
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPL 90 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL 90 (499)
+..|..|.+|||+|+.+|+.+++++||.++..+|..+..|.||||.||.+ ||.+++.+|+++|+|.-.+ |..+.|+|
T Consensus 76 dl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh-gh~dvv~~Ll~~~adp~i~--nns~~t~l 152 (854)
T KOG0507|consen 76 DLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH-GHLEVVFYLLKKNADPFIR--NNSKETVL 152 (854)
T ss_pred hhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh-cchHHHHHHHhcCCCcccc--CcccccHH
Confidence 44578899999999999999999999999999999999999999999998 9999999999999999988 88999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCC--------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHh
Q 010851 91 HHAAKRGLEPTVRLLLSCGAN--------ALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALA 162 (499)
Q Consensus 91 ~~A~~~g~~~~v~~Ll~~ga~--------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A 162 (499)
-+|++.|..++|+.|++.... ...++-.+.+|||+|+++||.++++.|++.|.++| ...+.| |+|| -|
T Consensus 153 dlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din--~~t~~g-talh-ea 228 (854)
T KOG0507|consen 153 DLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDIN--YTTEDG-TALH-EA 228 (854)
T ss_pred HHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcc--cccccc-hhhh-hH
Confidence 999999999999999976221 12355678899999999999999999999999999 554444 8999 89
Q ss_pred hhcCCHHHHHHHHhcCCCCCCCCcccccccCcc
Q 010851 163 PQLMSRKIWVVVIPCGTANPSKPLRFELVIYPS 195 (499)
Q Consensus 163 ~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~ 195 (499)
+..|..+++.+|++.|.+...++..+++++.+-
T Consensus 229 alcgk~evvr~ll~~gin~h~~n~~~qtaldil 261 (854)
T KOG0507|consen 229 ALCGKAEVVRFLLEIGINTHIKNQHGQTALDII 261 (854)
T ss_pred hhcCcchhhhHHHhhccccccccccchHHHHHH
Confidence 999999999999999999888887776665443
No 66
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.78 E-value=1.6e-18 Score=146.59 Aligned_cols=143 Identities=22% Similarity=0.092 Sum_probs=120.5
Q ss_pred HHHHHHHcCCcHHHHHHHHHcCCC-CCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCC
Q 010851 53 PLIVACMDSGLINVAKTLIELGAN-INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (499)
Q Consensus 53 pLh~Aa~~~g~~~~v~~Ll~~ga~-~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~ 131 (499)
-+.+|+.. +....|+.||+..++ +|.+ |.+|+||||.|+.+||.+||+.|+..|++++.+...|+||||-|+..++
T Consensus 66 l~lwaae~-nrl~eV~~lL~e~an~vNtr--D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 66 LLLWAAEK-NRLTEVQRLLSEKANHVNTR--DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHhh-ccHHHHHHHHHhcccccccc--ccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 46788887 889999999987766 7887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccccccccccccCCCHHHHHhhhc-CCHHHHHHHH-hcCCCCCCCCcccccccCccccccCh
Q 010851 132 INVVRAIESHICYFCGWLREFYGPSFLEALAPQL-MSRKIWVVVI-PCGTANPSKPLRFELVIYPSLQDVQP 201 (499)
Q Consensus 132 ~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~-~~~~~~~~Ll-~~ga~~~~~~~~~~~~l~~~~~~~~~ 201 (499)
.+++.+|+++|+|++ .......|||| +|+.. +....+.+|+ ..+.+...++...++++.++-+.+..
T Consensus 143 ~~va~~LLqhgaDVn--A~t~g~ltpLh-laa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s 211 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVN--AQTKGLLTPLH-LAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS 211 (228)
T ss_pred hhHHHHHHhccCccc--ccccccchhhH-HhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence 999999999999999 88888999999 66654 4455566655 45666666676777777766555443
No 67
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.78 E-value=1.5e-18 Score=138.19 Aligned_cols=89 Identities=36% Similarity=0.517 Sum_probs=72.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHH
Q 010851 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (499)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~ 100 (499)
||+|++.|+.+++++|++.+.+++. |.||||+|+.+ |+.+++++|+++|++++.+ |..|+||||+|+.+|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAEN-GNLEIVKLLLENGADINSQ--DKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHT-TTHHHHHHHHHTTTCTT-B--STTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHc-CCHHHHHHHHHhccccccc--CCCCCCHHHHHHHcCCHH
Confidence 7888888888888888888877765 78888888887 8888888888888888887 778888888888888888
Q ss_pred HHHHHHHCCCCCcccC
Q 010851 101 TVRLLLSCGANALVRN 116 (499)
Q Consensus 101 ~v~~Ll~~ga~~~~~d 116 (499)
++++|+++|++++.+|
T Consensus 74 ~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 74 IVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHTTT-TTSS-
T ss_pred HHHHHHHcCCCCCCcC
Confidence 8888888888887665
No 68
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.77 E-value=7.1e-18 Score=142.42 Aligned_cols=125 Identities=34% Similarity=0.522 Sum_probs=107.0
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHH
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
.+|.+|.||||+|+..|+.+++++|++++.+.+..+..|.||||+|+.. +..+++++|+++|++++.. +..|.||+|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~--~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN-GHLEIVKLLLEKGADVNAR--DKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCcccc--CCCCCCHHH
Confidence 3467788999999999988899999988888788888888999998887 7788888888888888877 678888999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 010851 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (499)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 139 (499)
+|+..++.+++++|++.|.+++..+..|.|||++|...++.+++++|+
T Consensus 79 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 79 LAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 998888888899988888888888888888888888888888888774
No 69
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.76 E-value=6.6e-19 Score=184.00 Aligned_cols=228 Identities=23% Similarity=0.200 Sum_probs=188.0
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
..+-+|+|-.|+..|+-|+|++|+.+|+++..+|..|.+||.+|+-. ||..+|+.|+++.+++..+. |+.+.|+|-+|
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaata-gh~tvV~~llk~ha~veaQs-drtkdt~lSla 831 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATA-GHITVVQDLLKAHADVEAQS-DRTKDTMLSLA 831 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhccc-CchHHHHHHHhhhhhhhhhc-ccccCceEEEe
Confidence 34557999999999999999999999999999999999999999975 99999999999999999985 89999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHH
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~ 173 (499)
+..|+.++|++||.+|++-..++-..+|||.+|...|.++||++|+.+|++++...-.+.|-.||+ +|..+++....+.
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm-latmngh~~at~~ 910 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM-LATMNGHQAATLS 910 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh-hhhhccccHHHHH
Confidence 999999999999999999999999999999999999999999999999999995555788999999 9999999999999
Q ss_pred HHhcCCCCCCCCc-ccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh-CCCCHHHHHHH
Q 010851 174 VIPCGTANPSKPL-RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA-NEGDKHQLQWL 251 (499)
Q Consensus 174 Ll~~ga~~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~-~~~~~~~l~~~ 251 (499)
|++.|.|+|..-. ...+++-.+.-.+....+..|+.. ...+..+-+.|.|||+-++. ..-+...++.-
T Consensus 911 ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~----------~anvehRaktgltplme~AsgGyvdvg~~li~ 980 (2131)
T KOG4369|consen 911 LLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAA----------QANVEHRAKTGLTPLMEMASGGYVDVGNLLIA 980 (2131)
T ss_pred HhcccchhccccccccccceeeccccCcchHHHHHHHH----------hhhhhhhcccCCcccchhhcCCccccchhhhh
Confidence 9999999986432 334444444434444444433322 22356677788899987774 22344444444
Q ss_pred HHH
Q 010851 252 DNA 254 (499)
Q Consensus 252 ~~~ 254 (499)
.++
T Consensus 981 ~ga 983 (2131)
T KOG4369|consen 981 AGA 983 (2131)
T ss_pred ccc
Confidence 433
No 70
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.75 E-value=1.2e-18 Score=182.05 Aligned_cols=222 Identities=19% Similarity=0.178 Sum_probs=169.0
Q ss_pred ccccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCC
Q 010851 5 LNSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWM-DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPG 83 (499)
Q Consensus 5 l~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~-d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d 83 (499)
.++.|++.+|+.|.+||.+|+-.||..+|+.|+++.++++.. |..+.|+|-+||. +|+.++|++||.+|++-..+ +
T Consensus 778 ~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs-ggr~~vvelLl~~gankehr--n 854 (2131)
T KOG4369|consen 778 VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS-GGRTRVVELLLNAGANKEHR--N 854 (2131)
T ss_pred HhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC-CCcchHHHHHHHhhcccccc--c
Confidence 356889999999999999999999999999999988888754 5678889988886 48888888888888887777 6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHccccccc--------------
Q 010851 84 GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN--DDCHTALGVARIKGHINVVRAIESHICYFCG-------------- 147 (499)
Q Consensus 84 ~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d--~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-------------- 147 (499)
....|||-+|...|..++|++||.+|++++.+. +.|..||++|..+||-+.++.|++.|-|+|.
T Consensus 855 vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~ 934 (2131)
T KOG4369|consen 855 VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLAL 934 (2131)
T ss_pred hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecc
Confidence 677888888888888888888888887776654 5677888888887777777777777766652
Q ss_pred ------------------ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCc--ccccccCccccccChHHHHHH
Q 010851 148 ------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPL--RFELVIYPSLQDVQPRAVIAL 207 (499)
Q Consensus 148 ------------------~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~--~~~~~l~~~~~~~~~~~~~~l 207 (499)
..+-+.|.|||+ -++..|.+++-++||..|+|.+..+. ...+++-+.+..++.+-+..
T Consensus 935 fqgr~evv~lLLa~~anvehRaktgltplm-e~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~- 1012 (2131)
T KOG4369|consen 935 FQGRPEVVFLLLAAQANVEHRAKTGLTPLM-EMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPK- 1012 (2131)
T ss_pred ccCcchHHHHHHHHhhhhhhhcccCCcccc-hhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHH-
Confidence 134567888888 78888888888888888888887654 23445555555555433333
Q ss_pred HHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 208 WKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
++..++.+.+.|++|.|+|-+|+.
T Consensus 1013 ---------lln~~atv~v~NkkG~T~Lwla~~ 1036 (2131)
T KOG4369|consen 1013 ---------LLNGDATVRVPNKKGCTVLWLASA 1036 (2131)
T ss_pred ---------hhCCccceecccCCCCcccchhcc
Confidence 222456688899999999877763
No 71
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.74 E-value=6.1e-17 Score=136.65 Aligned_cols=125 Identities=35% Similarity=0.475 Sum_probs=117.1
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHH
Q 010851 45 WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (499)
Q Consensus 45 ~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~ 124 (499)
.+|.+|.||||+|+.. ++.+++++|++++.+.+.. +..|.||||+|+..+..+++++|++.|++++..+..|.||+|
T Consensus 2 ~~~~~g~t~l~~a~~~-~~~~~i~~li~~~~~~~~~--~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASN-GHLEVVKLLLENGADVNAK--DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHc-CcHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 3567899999999998 9999999999999998777 889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHH
Q 010851 125 VARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll 175 (499)
+|+..++.+++++|++++.+++ ..+..|.|+++ +|...++.+++++|+
T Consensus 79 ~a~~~~~~~~~~~L~~~~~~~~--~~~~~~~~~l~-~~~~~~~~~~~~~Ll 126 (126)
T cd00204 79 LAARNGNLDVVKLLLKHGADVN--ARDKDGRTPLH-LAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCc--ccCCCCCCHHH-HHHhcCCHHHHHHhC
Confidence 9999999999999999998888 78899999999 899889999999875
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.74 E-value=2e-17 Score=131.76 Aligned_cols=86 Identities=35% Similarity=0.470 Sum_probs=76.3
Q ss_pred HHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHH
Q 010851 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHIN 133 (499)
Q Consensus 54 Lh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~ 133 (499)
||+||+. |+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 1 L~~A~~~-~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQN-GNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHT-TTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHc-CCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence 7899987 889999999998877763 778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccccc
Q 010851 134 VVRAIESHICYFC 146 (499)
Q Consensus 134 ~v~~Ll~~g~~~~ 146 (499)
++++|+++|++++
T Consensus 74 ~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 74 IVKLLLEHGADVN 86 (89)
T ss_dssp HHHHHHHTTT-TT
T ss_pred HHHHHHHcCCCCC
Confidence 9999999999887
No 73
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.72 E-value=5.8e-17 Score=167.39 Aligned_cols=166 Identities=20% Similarity=0.251 Sum_probs=143.5
Q ss_pred CccccCCCchHHHHHHHH---cCCHHHHHHHHHcCCC-Cc--c--cCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCcc
Q 010851 9 NQHQQRQSKDELLYQWVI---AGDVDAIRALRSQGAS-LE--W--MDKEGKTPLIVACMDSGLINVAKTLIELGANINAY 80 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~---~g~~~~v~~Ll~~g~~-~~--~--~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~ 80 (499)
+.+.+-..|+|.||.|.. .++.++++.||+.-.. +| . ....|+||||+|+.+ .+.++|++|++.|||++.+
T Consensus 135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~-~~~~~V~lLl~~gADV~aR 213 (782)
T KOG3676|consen 135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVN-RDAELVRLLLAAGADVHAR 213 (782)
T ss_pred ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHh-ccHHHHHHHHHcCCchhhH
Confidence 455667789999999997 4566899999985321 11 1 124799999999998 8899999999999999875
Q ss_pred C------C-CC--------------CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 010851 81 R------P-GG--------------RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (499)
Q Consensus 81 ~------~-d~--------------~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 139 (499)
- + |. .|..||-+|+--++.+++++|+++|||++.+|..|+|.||..+..-..++..+++
T Consensus 214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 0 11 2778999999999999999999999999999999999999999998899999999
Q ss_pred Hcccc--cccccccccCCCHHHHHhhhcCCHHHHHHHHhcC
Q 010851 140 SHICY--FCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 140 ~~g~~--~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~g 178 (499)
++|++ .. .+|..|.|||. +|++.|..++.+.+++..
T Consensus 294 ~~ga~~l~~--v~N~qgLTPLt-LAaklGk~emf~~ile~~ 331 (782)
T KOG3676|consen 294 ELGANALEH--VRNNQGLTPLT-LAAKLGKKEMFQHILERR 331 (782)
T ss_pred hcCCCcccc--ccccCCCChHH-HHHHhhhHHHHHHHHHhh
Confidence 99998 66 89999999999 999999999999999984
No 74
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.66 E-value=1e-15 Score=143.35 Aligned_cols=129 Identities=29% Similarity=0.362 Sum_probs=97.0
Q ss_pred cccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCC-----HHHHHHHHHCCC---CCccc
Q 010851 44 EWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL-----EPTVRLLLSCGA---NALVR 115 (499)
Q Consensus 44 ~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~-----~~~v~~Ll~~ga---~~~~~ 115 (499)
...+..+.+++|+++.. +..+++++|+..|++++.+ +..|.||||+|+..++ .+++++|++.|+ +.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~ 143 (235)
T COG0666 67 AARDLDGRLPLHSAASK-GDDKIVKLLLASGADVNAK--DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR 143 (235)
T ss_pred ccCCccccCHHHHHHHc-CcHHHHHHHHHcCCCcccc--cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc
Confidence 34455677777777776 7777777777777777776 7777777777777777 777777777777 44555
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcC
Q 010851 116 NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 116 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~g 178 (499)
|..|.||||+|+..|+.+++++|++.|++++ .++..|.|+++ .|...++.++++.++..+
T Consensus 144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~--~~~~~g~t~l~-~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 144 DEDGNTPLHWAALNGDADIVELLLEAGADPN--SRNSYGVTALD-PAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCCchhHHHHHcCchHHHHHHHhcCCCCc--ccccCCCcchh-hhcccchHHHHHHHHhcC
Confidence 7777777777777777777777777777777 66777777777 777777777777777765
No 75
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.65 E-value=6.1e-16 Score=117.23 Aligned_cols=103 Identities=29% Similarity=0.388 Sum_probs=87.9
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g 97 (499)
+.-+.|++++|..+-|+.....|.++|..= .|++|||||+-. |+.+++++|+..|++++.+ |+.|.|||.-|+..|
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~-GQl~ilefli~iGA~i~~k--DKygITPLLsAvwEG 78 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADY-GQLSILEFLISIGANIQDK--DKYGITPLLSAVWEG 78 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhc-chHHHHHHHHHhccccCCc--cccCCcHHHHHHHHh
Confidence 345788999999999999988888887653 789999999988 8899999999999999887 889999999999999
Q ss_pred CHHHHHHHHHCCCCCcccCCCCCCHHH
Q 010851 98 LEPTVRLLLSCGANALVRNDDCHTALG 124 (499)
Q Consensus 98 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~ 124 (499)
|.++|++||+.|++-..+..+|.+.+.
T Consensus 79 H~~cVklLL~~GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 79 HRDCVKLLLQNGADRTIHAPDGTALIE 105 (117)
T ss_pred hHHHHHHHHHcCcccceeCCCchhHHh
Confidence 999999999999988888888866543
No 76
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.62 E-value=1.7e-15 Score=156.66 Aligned_cols=125 Identities=26% Similarity=0.295 Sum_probs=116.4
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccc---------CC--------------CCChHHHHHHHcCCcHHHHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWM---------DK--------------EGKTPLIVACMDSGLINVAKTL 70 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~---------d~--------------~g~TpLh~Aa~~~g~~~~v~~L 70 (499)
.-.|.||||+|+.+.+.++|++|++.||||+.+ |. .|+.||-+||.. ++.|++++|
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~-nq~eivrlL 259 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACT-NQPEIVRLL 259 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHc-CCHHHHHHH
Confidence 346999999999999999999999999999753 11 367899999987 999999999
Q ss_pred HHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 71 IELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN--ALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 71 l~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
+++|+|++.+ |..|+|.||..+..-..++..++|++|++ ...+|..|.|||.+|+..|..++.+.+++.
T Consensus 260 l~~gAd~~aq--DS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 260 LAHGADPNAQ--DSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HhcCCCCCcc--ccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999 89999999999999999999999999999 889999999999999999999999999998
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.61 E-value=1.5e-14 Score=135.26 Aligned_cols=132 Identities=34% Similarity=0.392 Sum_probs=121.6
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCc-----HHHHHHHHHcCC---CCCc
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL-----INVAKTLIELGA---NINA 79 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~-----~~~v~~Ll~~ga---~~~~ 79 (499)
......+..+.+++|+++..+..+++++|+..|++++.+|..|.||||+|+.. ++ .+++++|++.|+ ..+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~~~~~~ll~~g~~~~~~~~ 142 (235)
T COG0666 64 RHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALN-GNPPEGNIEVAKLLLEAGADLDVNNL 142 (235)
T ss_pred cccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhc-CCcccchHHHHHHHHHcCCCCCCccc
Confidence 34445677789999999999999999999999999999999999999999997 88 999999999999 5555
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010851 80 YRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (499)
Q Consensus 80 ~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 142 (499)
+ |..|+||||+|+..|+.+++++|++.|++++.++..|.|+|++|+..++.++++.|+..+
T Consensus 143 ~--~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 R--DEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred c--CCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 5 889999999999999999999999999999999999999999999999999999999976
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.58 E-value=6.3e-15 Score=111.74 Aligned_cols=102 Identities=26% Similarity=0.292 Sum_probs=93.5
Q ss_pred hHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCC
Q 010851 52 TPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (499)
Q Consensus 52 TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~ 131 (499)
--++|++++ |.++-|+..+..|-|+|.. ..|++|||+|+-.|..+++++|+..|++++.+|+.|.|||.-|+..||
T Consensus 4 ~~~~W~vkN-G~~DeVk~~v~~g~nVn~~---~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 4 MSVAWNVKN-GEIDEVKQSVNEGLNVNEI---YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hhHhhhhcc-CcHHHHHHHHHccccHHHH---hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhh
Confidence 346788987 8899999999999888865 489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccccccccccccCCCHHH
Q 010851 132 INVVRAIESHICYFCGWLREFYGPSFLE 159 (499)
Q Consensus 132 ~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh 159 (499)
.++|++|+++|++.. .+..+|.+.+.
T Consensus 80 ~~cVklLL~~GAdrt--~~~PdG~~~~e 105 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRT--IHAPDGTALIE 105 (117)
T ss_pred HHHHHHHHHcCcccc--eeCCCchhHHh
Confidence 999999999999988 88888988776
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.56 E-value=2.5e-14 Score=130.57 Aligned_cols=124 Identities=31% Similarity=0.364 Sum_probs=115.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
.-..+|..++..|+.+-...||+---++|..|..|.|+|..|+.+ |+.+++++||++|+|+|... +..+.||||+|+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAayk-Gnl~~v~lll~~gaDvN~~q-hg~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYK-GNLTLVELLLELGADVNDKQ-HGTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhc-CcHHHHHHHHHhCCCcCccc-ccccccHHHHHHH
Confidence 346899999999999999999997667999999999999999998 99999999999999999873 7889999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
.|+.++.++|++.|+.+...|.-|+|+-.+|+.-|+.++|..+-.+
T Consensus 89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred cCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 9999999999999999999999999999999999999999877544
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.54 E-value=3.6e-14 Score=153.22 Aligned_cols=106 Identities=32% Similarity=0.432 Sum_probs=99.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCC
Q 010851 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL 98 (499)
Q Consensus 19 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~ 98 (499)
..|+.|+..|+.+.|+.|+++|+++|.+|..|+||||+|+.+ |+.+++++|+++|++++.+ |..|.||||+|+..|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~-g~~eiv~~LL~~Gadvn~~--d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN-GHVQVVRVLLEFGADPTLL--DKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCCc
Confidence 458999999999999999999999999999999999999998 9999999999999999998 8899999999999999
Q ss_pred HHHHHHHHHC-------CCCCcccCCCCCCHHHHHH
Q 010851 99 EPTVRLLLSC-------GANALVRNDDCHTALGVAR 127 (499)
Q Consensus 99 ~~~v~~Ll~~-------ga~~~~~d~~g~tpL~~A~ 127 (499)
.+++++|+++ |++++..+..|.+|+..+.
T Consensus 161 ~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 161 REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999998 8888888888888876654
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.53 E-value=4.4e-14 Score=152.56 Aligned_cols=102 Identities=29% Similarity=0.301 Sum_probs=95.0
Q ss_pred HHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCH
Q 010851 53 PLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI 132 (499)
Q Consensus 53 pLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~ 132 (499)
.||.|+.. |+.+++++|+++|+++|.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 85 ~L~~aa~~-G~~~~vk~LL~~Gadin~~--d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 85 ELCQLAAS-GDAVGARILLTGGADPNCR--DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHc-CCHHHHHHHHHCCCCCCCc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 58899987 9999999999999999998 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------ccccccccccccCCCHHH
Q 010851 133 NVVRAIESH-------ICYFCGWLREFYGPSFLE 159 (499)
Q Consensus 133 ~~v~~Ll~~-------g~~~~~~~~~~~g~t~Lh 159 (499)
+++++|+++ |++.+ ..+..|.+++.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~--~~~~~g~~~~~ 193 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAK--PDSFTGKPPSL 193 (664)
T ss_pred HHHHHHHhCCCcccccCCCCC--ccccCCCCccc
Confidence 999999999 77776 67777777665
No 82
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=3.8e-15 Score=99.50 Aligned_cols=54 Identities=41% Similarity=0.976 Sum_probs=50.5
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccceeEeeeC
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
.+|.||+|.+.+.|+.-|||++.|++|..++++. ...||+||++|..+|+.|++
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~~~~~g~CPiCRapi~dvIkTY~s 62 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLKKALHGCCPICRAPIKDVIKTYRS 62 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHHHccCCcCcchhhHHHHHHHhhcC
Confidence 5999999999999999999999999999999884 67899999999999999874
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.4e-13 Score=133.41 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=70.9
Q ss_pred HHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHH
Q 010851 57 ACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVR 136 (499)
Q Consensus 57 Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~ 136 (499)
|+.. |.+++|+-.+..--|+..- +..|.|+||-|+-.||.+||++|++.|+++|..|.+||||||+|+..+++.+++
T Consensus 557 aaLe-GEldlVq~~i~ev~DpSqp--NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 557 AALE-GELDLVQRIIYEVTDPSQP--NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred hhhc-chHHHHHHHHHhhcCCCCC--CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 4444 6666666666655555554 556666666666666666666666666666666666666666666666666666
Q ss_pred HHHHcccccccccccccCCCHHHHHh-hhcCCHHHHHHHHh
Q 010851 137 AIESHICYFCGWLREFYGPSFLEALA-PQLMSRKIWVVVIP 176 (499)
Q Consensus 137 ~Ll~~g~~~~~~~~~~~g~t~Lh~~A-~~~~~~~~~~~Ll~ 176 (499)
.|++.|+-+. ...-.++.|+...+- -..|..+|.+||..
T Consensus 634 qLVe~Gaavf-AsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 634 QLVESGAAVF-ASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHhccceEE-eeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 6666666554 234455666665221 23455666666653
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.46 E-value=7e-14 Score=100.35 Aligned_cols=54 Identities=41% Similarity=0.486 Sum_probs=16.4
Q ss_pred HHcC-CCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 37 RSQG-ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 37 l~~g-~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
|++| .+++.+|..|+||||+||.+ |+.+++++|++.|++++.+ |..|+||||+|
T Consensus 2 L~~~~~~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll~~g~d~~~~--d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADVNAQDKYGNTPLHWAARY-GHSEVVRLLLQNGADPNAK--DKDGQTPLHYA 56 (56)
T ss_dssp ----T--TT---TTS--HHHHHHHH-T-HHHHHHHHHCT--TT-----TTS--HHHH-
T ss_pred CccCcCCCcCcCCCCCcHHHHHHHc-CcHHHHHHHHHCcCCCCCC--cCCCCCHHHhC
Confidence 3444 44444444444444444444 4444444444444444444 44444444443
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.45 E-value=7.6e-14 Score=100.18 Aligned_cols=55 Identities=45% Similarity=0.631 Sum_probs=29.2
Q ss_pred HHHcC-CCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 010851 70 LIELG-ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVA 126 (499)
Q Consensus 70 Ll~~g-a~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 126 (499)
||++| ++++.+ |..|+||||+|+.+|+.++|++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~--d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ--DKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT-----TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc--CCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 777777 78888888888888888888888888888888888888888876
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.44 E-value=2.1e-13 Score=97.32 Aligned_cols=54 Identities=28% Similarity=0.449 Sum_probs=28.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHH
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI 71 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll 71 (499)
|.|+||+|++.|+.+++++|+++|+++|.+|.+|+||||+|+.+ |+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~-g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKN-GNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHT-T-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-cCHHHHHHHC
Confidence 45556666666666666666655555555555566666666554 5555555554
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=5.8e-13 Score=130.76 Aligned_cols=122 Identities=28% Similarity=0.330 Sum_probs=106.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+-.-.|.-|+..|.+++|+..+..--|+...|..|.||||-|+.. ||.+||++||+.|+|+|.. |.+||||||+|+.
T Consensus 549 nPLaLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCa-ghyeIVkFLi~~ganVNa~--DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 549 NPLALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICA-GHYEIVKFLIEFGANVNAA--DSDGWTPLHCAAS 625 (752)
T ss_pred chHHHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhc-chhHHHHHHHhcCCcccCc--cCCCCchhhhhhh
Confidence 334677889999999999999998888989999999999999986 9999999999999999999 8999999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccC-CCCCCHHHHHH--HcCCHHHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRN-DDCHTALGVAR--IKGHINVVRAIES 140 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~--~~g~~~~v~~Ll~ 140 (499)
.++..+++.|++.|+-+.... .++.|+..-+- +.|...|.+||-.
T Consensus 626 CNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 626 CNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 999999999999998876543 67788876543 4578888888854
No 88
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.42 E-value=4.6e-13 Score=95.50 Aligned_cols=53 Identities=40% Similarity=0.596 Sum_probs=23.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAI 138 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~L 138 (499)
|+||||+|++.|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 34455555555555555555555555554455555555555555555555444
No 89
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.41 E-value=1.2e-12 Score=119.76 Aligned_cols=119 Identities=24% Similarity=0.231 Sum_probs=108.7
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHH
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALV-RNDDCHTALGVARI 128 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~ 128 (499)
-..+|.-+.-+ |..+-+..||.---++|.+ |..|+|+|+.|+.+|+.++|++||+.|+|+|. ++..++||||+|+.
T Consensus 12 ~~~~Lle~i~K-ndt~~a~~LLs~vr~vn~~--D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 12 PKSPLLEAIDK-NDTEAALALLSTVRQVNQR--DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred hhhHHHHHHcc-CcHHHHHHHHHHhhhhhcc--CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 46789888887 8889999999886778988 88999999999999999999999999999975 56889999999999
Q ss_pred cCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHH
Q 010851 129 KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVV 174 (499)
Q Consensus 129 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~L 174 (499)
.|+.++.++|++.|+... ..|.-|+|+-. .|+-.|+.+++.++
T Consensus 89 SGn~dvcrllldaGa~~~--~vNsvgrTAaq-mAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMY--LVNSVGRTAAQ-MAAFVGHHECVAII 131 (396)
T ss_pred cCCchHHHHHHhccCccc--cccchhhhHHH-HHHHhcchHHHHHH
Confidence 999999999999999988 89999999999 89999999988755
No 90
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=99.21 E-value=8.5e-12 Score=87.08 Aligned_cols=49 Identities=37% Similarity=0.956 Sum_probs=42.4
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccce
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 493 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 493 (499)
+..|.||++...+++++||||.++|..|+.++...+..||+||++|.++
T Consensus 2 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~V 50 (50)
T PF13920_consen 2 DEECPICFENPRDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIESV 50 (50)
T ss_dssp HSB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-SEE
T ss_pred cCCCccCCccCCceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhcCC
Confidence 3689999999999999999999559999999988788999999999764
No 91
>KOG4275 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=2.3e-11 Score=111.20 Aligned_cols=51 Identities=37% Similarity=0.959 Sum_probs=48.9
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
...|.||+|.+.+.+|++|||++.|..|.++|.. ||+||+.|.++++||++
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmVtCt~CGkrm~e----CPICRqyi~rvvrif~~ 350 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMVTCTKCGKRMNE----CPICRQYIVRVVRIFRV 350 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEEeehhhcccccc----CchHHHHHHHHHhhhcC
Confidence 6799999999999999999999999999999986 99999999999999986
No 92
>KOG4265 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=1.3e-10 Score=110.67 Aligned_cols=56 Identities=29% Similarity=0.866 Sum_probs=51.5
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 498 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~ 498 (499)
+...+|+||+...++.+++||+|.|+|..|++.+.-+...||+||++|...+.||.
T Consensus 288 ~~gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q~n~CPICRqpi~~ll~i~~ 343 (349)
T KOG4265|consen 288 ESGKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQTNNCPICRQPIEELLEIYV 343 (349)
T ss_pred cCCCeeEEEecCCcceEEecchhhehhHhHHHHHHHhhcCCCccccchHhhheecc
Confidence 45579999999999999999999999999999999777789999999999998874
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.91 E-value=6.8e-10 Score=114.76 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=82.6
Q ss_pred HHHHHHH-cCCC-CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q 010851 32 AIRALRS-QGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG 109 (499)
Q Consensus 32 ~v~~Ll~-~g~~-~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 109 (499)
-++-++. ++.+ .|.+|..|+|+||+|+.. |..++++.||++|++++.+| ...|+||||.|+.+|+++++-+||.+|
T Consensus 32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~-~k~~~l~wLlqhGidv~vqD-~ESG~taLHRaiyyG~idca~lLL~~g 109 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSE-NKNSFLRWLLQHGIDVFVQD-EESGYTALHRAIYYGNIDCASLLLSKG 109 (1267)
T ss_pred HHHHHHHHhhhhhhhHHHhhccceeeeeecc-chhHHHHHHHhcCceeeecc-ccccchHhhHhhhhchHHHHHHHHhcC
Confidence 3455554 3322 678999999999999987 88999999999999999996 568999999999999999999999999
Q ss_pred CCCcccCCCCCCHHHHHHH
Q 010851 110 ANALVRNDDCHTALGVARI 128 (499)
Q Consensus 110 a~~~~~d~~g~tpL~~A~~ 128 (499)
+.+.++|.+|..||.+-.+
T Consensus 110 ~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 110 RSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred CceEEecccCCCHHHHHhh
Confidence 9999999999999988766
No 94
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.91 E-value=1.3e-09 Score=106.33 Aligned_cols=90 Identities=28% Similarity=0.323 Sum_probs=50.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCCCCcHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAA 94 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~TpL~~A~ 94 (499)
++...+++|++.|++..++.+.-.|.|++.+|.+.+|+||+||.. |+.+++++||+. +.+++.+ |++|+|||--|.
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaE-G~v~v~kfl~~~~kv~~~~k--DRw~rtPlDdA~ 581 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAE-GHVEVVKFLLNACKVDPDPK--DRWGRTPLDDAK 581 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeeccc-CceeHHHHHHHHHcCCCChh--hccCCCcchHhH
Confidence 344455555555555555555555555555555555555555554 555555555543 4455555 555555555555
Q ss_pred HcCCHHHHHHHHHC
Q 010851 95 KRGLEPTVRLLLSC 108 (499)
Q Consensus 95 ~~g~~~~v~~Ll~~ 108 (499)
..+|.+++++|-+.
T Consensus 582 ~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEA 595 (622)
T ss_pred hcCcHHHHHHHHHH
Confidence 55555555555543
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.90 E-value=6.2e-09 Score=102.08 Aligned_cols=101 Identities=29% Similarity=0.384 Sum_probs=86.8
Q ss_pred CcccCCCCChH------HHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC
Q 010851 43 LEWMDKEGKTP------LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN 116 (499)
Q Consensus 43 ~~~~d~~g~Tp------Lh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d 116 (499)
+..+|.+|.|+ ||-.++. |+.+..-.||..|+++|+.++ ..|.||||.|++.|..--+++|+-+|||++..|
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt-~nlet~LRll~lGA~~N~~hp-ekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d 197 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRT-GNLETCLRLLSLGAQANFFHP-EKGNTPLHVAAKAGQILQAELLAVYGADPGAQD 197 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhc-ccHHHHHHHHHcccccCCCCc-ccCCchhHHHHhccchhhhhHHhhccCCCCCCC
Confidence 34567777665 7888876 889999999999999999874 579999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 010851 117 DDCHTALGVARIKGHINVVRAIESHICYF 145 (499)
Q Consensus 117 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 145 (499)
.+|+||+.+|-..||-++.+.|++...++
T Consensus 198 ~~GmtP~~~AR~~gH~~laeRl~e~~y~v 226 (669)
T KOG0818|consen 198 SSGMTPVDYARQGGHHELAERLVEIQYEL 226 (669)
T ss_pred CCCCcHHHHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999999999988888754443
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.90 E-value=6.5e-09 Score=101.94 Aligned_cols=94 Identities=28% Similarity=0.312 Sum_probs=84.8
Q ss_pred ccCCCchH------HHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCC
Q 010851 12 QQRQSKDE------LLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (499)
Q Consensus 12 ~~d~~g~t------~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~ 84 (499)
-+|.+|-+ -||..++.|+.++.-.||..|+++|..+. .|.||||.|++. |+..-+++|+-+|+|++.. |.
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~-Gq~~Q~ElL~vYGAD~~a~--d~ 198 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA-GQILQAELLAVYGADPGAQ--DS 198 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhc-cchhhhhHHhhccCCCCCC--CC
Confidence 35666544 59999999999999999999999999875 699999999998 9999999999999999998 89
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSC 108 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ 108 (499)
+|+||+.+|-..||-++.+.|++.
T Consensus 199 ~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 199 SGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCCcHHHHHHhcCchHHHHHHHHH
Confidence 999999999999999998888864
No 97
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=98.89 E-value=1.9e-09 Score=94.98 Aligned_cols=55 Identities=25% Similarity=0.785 Sum_probs=45.7
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc----------------CCcccccccccc--ceeEee
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK----------------KGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~----------------~~~Cp~Cr~~i~--~~~~~~ 497 (499)
.++...|.||++...++++.+|||.| |+.|+.+|... ...||+||.+|. ..++||
T Consensus 15 ~~~~~~CpICld~~~dPVvT~CGH~F-C~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~~LvPiy 87 (193)
T PLN03208 15 SGGDFDCNICLDQVRDPVVTLCGHLF-CWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIY 87 (193)
T ss_pred CCCccCCccCCCcCCCcEEcCCCchh-HHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChhcEEEee
Confidence 34557999999999999999999999 99999987531 247999999996 466666
No 98
>KOG0823 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=1.5e-09 Score=97.24 Aligned_cols=55 Identities=33% Similarity=0.837 Sum_probs=48.4
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc---CCcccccccccc--ceeEee
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~--~~~~~~ 497 (499)
++..-.|.||+|...++|+..|||.| |+.|+.+|... ++.||+|+..|. .+|.||
T Consensus 44 ~~~~FdCNICLd~akdPVvTlCGHLF-CWpClyqWl~~~~~~~~cPVCK~~Vs~~~vvPlY 103 (230)
T KOG0823|consen 44 DGGFFDCNICLDLAKDPVVTLCGHLF-CWPCLYQWLQTRPNSKECPVCKAEVSIDTVVPLY 103 (230)
T ss_pred CCCceeeeeeccccCCCEEeecccce-ehHHHHHHHhhcCCCeeCCccccccccceEEeee
Confidence 45557999999999999999999999 99999999875 457999999985 688888
No 99
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=1.9e-09 Score=99.48 Aligned_cols=48 Identities=35% Similarity=0.938 Sum_probs=44.3
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
....|.+|+|...++...||||.| |+.|+..|...+..||+||..+..
T Consensus 238 a~~kC~LCLe~~~~pSaTpCGHiF-CWsCI~~w~~ek~eCPlCR~~~~p 285 (293)
T KOG0317|consen 238 ATRKCSLCLENRSNPSATPCGHIF-CWSCILEWCSEKAECPLCREKFQP 285 (293)
T ss_pred CCCceEEEecCCCCCCcCcCcchH-HHHHHHHHHccccCCCcccccCCC
Confidence 336999999999999999999999 999999999988899999999863
No 100
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.80 E-value=2.7e-09 Score=110.48 Aligned_cols=83 Identities=22% Similarity=0.213 Sum_probs=78.2
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
.|.+|.-|+|+||+|+..|..+++++||++|++++.+|. .|+||||-|... |+++++-+||.+|+.+..+ |++|..
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyy-G~idca~lLL~~g~SL~i~--Dkegls 121 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYY-GNIDCASLLLSKGRSLRIK--DKEGLS 121 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhh-chHHHHHHHHhcCCceEEe--cccCCC
Confidence 466899999999999999999999999999999999996 699999999998 9999999999999999999 899999
Q ss_pred HHHHHHH
Q 010851 89 PLHHAAK 95 (499)
Q Consensus 89 pL~~A~~ 95 (499)
||.+-++
T Consensus 122 plq~~~r 128 (1267)
T KOG0783|consen 122 PLQFLSR 128 (1267)
T ss_pred HHHHHhh
Confidence 9988776
No 101
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.78 E-value=2.6e-08 Score=99.19 Aligned_cols=118 Identities=21% Similarity=0.266 Sum_probs=87.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCC--CCccCCCCCCCcHHHHHHHcCC
Q 010851 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN--INAYRPGGRGGTPLHHAAKRGL 98 (499)
Q Consensus 21 L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~--~~~~~~d~~g~TpL~~A~~~g~ 98 (499)
|..|+..+++--+..+...|.++-.++.+..|.||||+.. |+.++|++||++|.. ++.. |..|.|+||-|+-.++
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~t-g~~eivkyildh~p~elld~~--de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKT-GNGEIVKYILDHGPSELLDMA--DETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhc-CChHHHHHHHhcCCHHHHHHH--hhhhhHHHHHHHHhcc
Confidence 4556666665555555566777777777778888888876 778888888888764 4444 6678888888888888
Q ss_pred HHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 99 EPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 99 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
-.+.++|++.|+.+...|..|.||-..|-+.|+.++..||-.+
T Consensus 947 r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 7888888888888877788888888888888888887777654
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.73 E-value=2.8e-08 Score=99.38 Aligned_cols=60 Identities=32% Similarity=0.437 Sum_probs=30.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010851 84 GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHIC 143 (499)
Q Consensus 84 ~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 143 (499)
.+|+|+||+|++.|+..+.++|+-+|+|+..+|..|+|+|.||-+.|.-+++..|+.+|.
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 344555555555555555555555555555555555555555555555555555555543
No 103
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=2e-08 Score=86.00 Aligned_cols=51 Identities=35% Similarity=0.876 Sum_probs=43.9
Q ss_pred cccccccccCCceE--EeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010851 446 SSCVICWEAPVEGA--CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 446 ~~C~iC~~~~~~~~--~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~~ 497 (499)
..|+|||+.....+ ...|||.| |..|++...+...+||+||+.|. ++++||
T Consensus 132 ~~CPiCl~~~sek~~vsTkCGHvF-C~~Cik~alk~~~~CP~C~kkIt~k~~~rI~ 186 (187)
T KOG0320|consen 132 YKCPICLDSVSEKVPVSTKCGHVF-CSQCIKDALKNTNKCPTCRKKITHKQFHRIY 186 (187)
T ss_pred cCCCceecchhhccccccccchhH-HHHHHHHHHHhCCCCCCcccccchhhheecc
Confidence 69999999875554 46999999 99999999888789999998875 688887
No 104
>PF13606 Ank_3: Ankyrin repeat
Probab=98.69 E-value=2.3e-08 Score=61.29 Aligned_cols=28 Identities=46% Similarity=0.767 Sum_probs=11.9
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCC
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANIN 78 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~ 78 (499)
|+||||+||.+ |+.+++++||++|+|+|
T Consensus 2 G~T~Lh~A~~~-g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASN-GNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHh-CCHHHHHHHHHcCCCCC
Confidence 34444444443 44444444444444443
No 105
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=98.69 E-value=9.6e-09 Score=67.45 Aligned_cols=38 Identities=37% Similarity=0.983 Sum_probs=33.1
Q ss_pred cccccccCCce-EEeCCCCchhhHHhHHHHhccCCccccc
Q 010851 448 CVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAKKGDCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~~~~Cp~C 486 (499)
|+||++...++ ++++|||.| |..|+.++...+.+||+|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~f-C~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSF-CKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEE-EHHHHHHHHHCTSB-TTT
T ss_pred CCCCCCcccCcCEECCCCCch-hHHHHHHHHHCcCCCcCC
Confidence 89999999999 688999999 999999988877899988
No 106
>PF13606 Ank_3: Ankyrin repeat
Probab=98.69 E-value=2.3e-08 Score=61.25 Aligned_cols=28 Identities=46% Similarity=0.614 Sum_probs=17.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANAL 113 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 113 (499)
|+||||+|++.|+.++|++||++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5566666666666666666666666654
No 107
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=98.68 E-value=1.1e-08 Score=67.88 Aligned_cols=38 Identities=37% Similarity=0.905 Sum_probs=30.6
Q ss_pred cccccccCCceEEeCCCCchhhHHhHHHHhccC----Cccccc
Q 010851 448 CVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK----GDCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~----~~Cp~C 486 (499)
|+||++.+.+++.++|||.| |..|+.++++.. ..||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~F-C~~Cl~~~~~~~~~~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSF-CRSCLERLWKEPSGSGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEE-EHHHHHHHHCCSSSST---SSS
T ss_pred CCccchhhCCccccCCcCHH-HHHHHHHHHHccCCcCCCCcCC
Confidence 89999999999999999999 999999998753 269987
No 108
>PHA02929 N1R/p28-like protein; Provisional
Probab=98.68 E-value=1.5e-08 Score=93.62 Aligned_cols=52 Identities=37% Similarity=0.813 Sum_probs=43.8
Q ss_pred ccccccccccCCc--------eEEeCCCCchhhHHhHHHHhccCCccccccccccceeEee
Q 010851 445 SSSCVICWEAPVE--------GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 445 ~~~C~iC~~~~~~--------~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~ 497 (499)
..+|+||++...+ +++.+|+|.| |..|+..|...+..||+||.++..+++..
T Consensus 174 ~~eC~ICle~~~~~~~~~~~~~vl~~C~H~F-C~~CI~~Wl~~~~tCPlCR~~~~~v~~~r 233 (238)
T PHA02929 174 DKECAICMEKVYDKEIKNMYFGILSNCNHVF-CIECIDIWKKEKNTCPVCRTPFISVIKSR 233 (238)
T ss_pred CCCCccCCcccccCccccccceecCCCCCcc-cHHHHHHHHhcCCCCCCCCCEeeEEeeee
Confidence 3699999997543 3556899999 99999999888889999999999877653
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.67 E-value=5e-08 Score=97.12 Aligned_cols=86 Identities=27% Similarity=0.368 Sum_probs=51.1
Q ss_pred HHHHHHHcCCHHHHHHHHH--cCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC
Q 010851 20 LLYQWVIAGDVDAIRALRS--QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (499)
Q Consensus 20 ~L~~Aa~~g~~~~v~~Ll~--~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g 97 (499)
|||+++.....+-+..++. ....++.+|..|.||||+|+.. |+.+.++.|+.+|+++..+ ++.|++|||.|+..|
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~L-g~~~~a~~Ll~a~Adv~~k--N~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRL-GHVEAARILLSAGADVSIK--NNEGWSPLHEAVSTG 99 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHh-cCHHHHHHHHhcCCCcccc--ccccccHHHHHHHcC
Confidence 3666666655554444332 2234555666666666666665 6666666666666666666 666666666666666
Q ss_pred CHHHHHHHHHC
Q 010851 98 LEPTVRLLLSC 108 (499)
Q Consensus 98 ~~~~v~~Ll~~ 108 (499)
+.+++..+|.+
T Consensus 100 ~~q~i~~vlr~ 110 (560)
T KOG0522|consen 100 NEQIITEVLRH 110 (560)
T ss_pred CHHHHHHHHHH
Confidence 66665555543
No 110
>KOG1571 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=6.1e-09 Score=99.31 Aligned_cols=54 Identities=35% Similarity=0.857 Sum_probs=48.8
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
......|+||++.+.+.+++||||+++|..|.+.+.+ ||+||+.|...+++|+.
T Consensus 302 ~~~p~lcVVcl~e~~~~~fvpcGh~ccct~cs~~l~~----CPvCR~rI~~~~k~y~~ 355 (355)
T KOG1571|consen 302 LPQPDLCVVCLDEPKSAVFVPCGHVCCCTLCSKHLPQ----CPVCRQRIRLVRKRYRS 355 (355)
T ss_pred cCCCCceEEecCCccceeeecCCcEEEchHHHhhCCC----CchhHHHHHHHHHHhcC
Confidence 3444799999999999999999999999999999886 99999999999999863
No 111
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.67 E-value=2.4e-08 Score=97.62 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=72.8
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCCHHHHH
Q 010851 48 KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC-GANALVRNDDCHTALGVA 126 (499)
Q Consensus 48 ~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A 126 (499)
.++...++||++. |.+..++.+.-.|.|++.+ |-+.+|+||.|+..|+++++++|++. +.+++.+|..|+|||.-|
T Consensus 504 ~~~~i~~~~aa~~-GD~~alrRf~l~g~D~~~~--DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 504 NDTVINVMYAAKN-GDLSALRRFALQGMDLETK--DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccchhhhhhhhhc-CCHHHHHHHHHhccccccc--ccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 4556778888876 7788888777788888877 67778888888888888888888875 577788888888888888
Q ss_pred HHcCCHHHHHHHHHccc
Q 010851 127 RIKGHINVVRAIESHIC 143 (499)
Q Consensus 127 ~~~g~~~~v~~Ll~~g~ 143 (499)
...+|.+++++|-+...
T Consensus 581 ~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HhcCcHHHHHHHHHHhc
Confidence 88888888888876543
No 112
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.66 E-value=3.8e-08 Score=62.06 Aligned_cols=30 Identities=43% Similarity=0.610 Sum_probs=13.6
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCCcc
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANINAY 80 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~ 80 (499)
|+||||+|+.+ |+.+++++|+++|++++.+
T Consensus 2 G~TpLh~A~~~-~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQR-GHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHT-TCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHH-HHHHHHHHHHHCcCCCCCC
Confidence 44444444443 4444444444444444443
No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.65 E-value=5.2e-08 Score=97.05 Aligned_cols=98 Identities=23% Similarity=0.261 Sum_probs=88.0
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGAS--LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
=+.-.++.+..+.||+|+..|+-++|++||++|.. ++..|..|.|+||-|+.. ++..+.++|++.|+.+... |..
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~-~~r~vc~~lvdagasl~kt--d~k 966 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ-RNRAVCQLLVDAGASLRKT--DSK 966 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh-cchHHHHHHHhcchhheec--ccC
Confidence 34445788889999999999999999999999963 677889999999999987 8899999999999999988 899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSC 108 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ 108 (499)
|.||-..|-..|..++..+|-..
T Consensus 967 g~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 967 GKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred CCChHHHHHhcCCchHHHHHhhh
Confidence 99999999999999999998654
No 114
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=98.64 E-value=1.2e-08 Score=69.11 Aligned_cols=40 Identities=40% Similarity=0.888 Sum_probs=35.1
Q ss_pred ccccccccC---CceEEeCCCCchhhHHhHHHHhccCCcccccc
Q 010851 447 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 487 (499)
Q Consensus 447 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr 487 (499)
.|+||++.. ..++.++|||.| |..|+..|.+.+..||+||
T Consensus 2 ~C~IC~~~~~~~~~~~~l~C~H~f-h~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPICLEEFEDGEKVVKLPCGHVF-HRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETTTTCBHHTTSCEEEETTSEEE-EHHHHHHHHHHSSB-TTTH
T ss_pred CCcCCChhhcCCCeEEEccCCCee-CHHHHHHHHHhCCcCCccC
Confidence 799999876 467788999999 9999999998888999997
No 115
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.62 E-value=4.3e-08 Score=61.80 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDK 48 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 48 (499)
+|.||||+|+..|+.+++++||++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998874
No 116
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.59 E-value=1e-07 Score=94.92 Aligned_cols=89 Identities=26% Similarity=0.408 Sum_probs=74.0
Q ss_pred hHHHHHHHcCCcHHHHHHHHH-cCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC
Q 010851 52 TPLIVACMDSGLINVAKTLIE-LGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG 130 (499)
Q Consensus 52 TpLh~Aa~~~g~~~~v~~Ll~-~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g 130 (499)
-|||+++.......+.+.|+. .+..++.+ |..|.||||+|+..|+.+.++.|+.+|+++..+|..|++|||.|+..|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~--D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR--DPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTG 99 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc--cCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcC
Confidence 459999987333344444443 34566766 788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcc
Q 010851 131 HINVVRAIESHI 142 (499)
Q Consensus 131 ~~~~v~~Ll~~g 142 (499)
+.+++..++.+.
T Consensus 100 ~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 100 NEQIITEVLRHL 111 (560)
T ss_pred CHHHHHHHHHHh
Confidence 999988888764
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.59 E-value=2e-07 Score=98.13 Aligned_cols=123 Identities=16% Similarity=0.096 Sum_probs=103.0
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQG----ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g----~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
...+.--...|+.+|+.-.|+..++.. .++|..|.-|+++|++|..+ .+.|++++|++++..+ . .+
T Consensus 22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~n-enle~~eLLl~~~~~~--g-------dA 91 (822)
T KOG3609|consen 22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDN-ENLELQELLLDTSSEE--G-------DA 91 (822)
T ss_pred cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceeccccc-ccHHHHHHHhcCcccc--c-------hH
Confidence 344566678899999999999999843 56889999999999999987 8899999999987655 2 48
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC----------cccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANA----------LVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~----------~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
|.+|+..|..++|++|+.+-... ...-..+.|||.+|+..++.||++.|+.+|+.+.
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 99999999999999999874332 1233467899999999999999999999998875
No 118
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.58 E-value=1.5e-07 Score=94.26 Aligned_cols=92 Identities=24% Similarity=0.177 Sum_probs=79.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCC----cccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhh
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCGANA----LVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAP 163 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~ 163 (499)
.-|.-|+.......+-+||.+|... ..-+.+|.|+||+|++.|++.+.++|+=+|+|+. .+|..|+|+|. ||-
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~--~rda~g~t~l~-yar 702 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM--ARDAHGRTALF-YAR 702 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccce--ecccCCchhhh-hHh
Confidence 3577788888888888999988543 2346788999999999999999999999999998 99999999999 999
Q ss_pred hcCCHHHHHHHHhcCCCCC
Q 010851 164 QLMSRKIWVVVIPCGTANP 182 (499)
Q Consensus 164 ~~~~~~~~~~Ll~~ga~~~ 182 (499)
+.+..+++.+|+.+|...+
T Consensus 703 ~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hcccHHHHHHHHHcCCCcc
Confidence 9999999999999998653
No 119
>PHA02926 zinc finger-like protein; Provisional
Probab=98.44 E-value=1.1e-07 Score=84.68 Aligned_cols=50 Identities=28% Similarity=0.816 Sum_probs=39.9
Q ss_pred ccccccccccCC---------ceEEeCCCCchhhHHhHHHHhccC------CccccccccccceeE
Q 010851 445 SSSCVICWEAPV---------EGACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKINQVIR 495 (499)
Q Consensus 445 ~~~C~iC~~~~~---------~~~~~pCgH~~~C~~C~~~~~~~~------~~Cp~Cr~~i~~~~~ 495 (499)
+.+|.||+|... -+++.+|+|.| |..|+..|...+ ..||+||..+...++
T Consensus 170 E~eCgICmE~I~eK~~~~eRrFGIL~~CnHsF-Cl~CIr~Wr~~r~~~~~~rsCPiCR~~f~~I~p 234 (242)
T PHA02926 170 EKECGICYEVVYSKRLENDRYFGLLDSCNHIF-CITCINIWHRTRRETGASDNCPICRTRFRNITM 234 (242)
T ss_pred CCCCccCccccccccccccccccccCCCCchH-HHHHHHHHHHhccccCcCCcCCCCcceeeeecc
Confidence 369999998742 25677999999 999999999743 359999999875554
No 120
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=98.36 E-value=3.4e-07 Score=61.73 Aligned_cols=41 Identities=39% Similarity=0.972 Sum_probs=34.4
Q ss_pred ccccccccC---CceEEeCCCCchhhHHhHHHHhccCCccccccc
Q 010851 447 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 488 (499)
Q Consensus 447 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~ 488 (499)
.|.||++.. ..+.+++|||.| |..|+..+......||+||+
T Consensus 1 ~C~~C~~~~~~~~~~~l~~CgH~~-C~~C~~~~~~~~~~CP~C~k 44 (44)
T PF14634_consen 1 HCNICFEKYSEERRPRLTSCGHIF-CEKCLKKLKGKSVKCPICRK 44 (44)
T ss_pred CCcCcCccccCCCCeEEcccCCHH-HHHHHHhhcCCCCCCcCCCC
Confidence 488999887 457788999999 99999999844557999984
No 121
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.35 E-value=5.6e-07 Score=97.44 Aligned_cols=88 Identities=23% Similarity=0.181 Sum_probs=57.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhh
Q 010851 84 GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAP 163 (499)
Q Consensus 84 ~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~ 163 (499)
..|.|+||.|+..+..-++++||+.|+++|..|..|.||||.+...|+...+.+|+++|++.+ ..+.+|.++|+ +|.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~--a~~~~~~~~l~-~a~ 730 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPN--AFDPDGKLPLD-IAM 730 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccc--ccCccCcchhh-HHh
Confidence 356667777777776667777777777777777777777777777777777777777666666 66666777766 554
Q ss_pred hcCCHHHHHHH
Q 010851 164 QLMSRKIWVVV 174 (499)
Q Consensus 164 ~~~~~~~~~~L 174 (499)
...+.+++-+|
T Consensus 731 ~~~~~d~~~l~ 741 (785)
T KOG0521|consen 731 EAANADIVLLL 741 (785)
T ss_pred hhccccHHHHH
Confidence 44444444333
No 122
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=98.34 E-value=2.8e-07 Score=61.27 Aligned_cols=38 Identities=37% Similarity=0.909 Sum_probs=34.2
Q ss_pred cccccccCCceE-EeCCCCchhhHHhHHHHhc--cCCccccc
Q 010851 448 CVICWEAPVEGA-CVPCGHMAGCMSCLSEIKA--KKGDCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~--~~~~Cp~C 486 (499)
|.||++...+.+ +++|||.| |..|+.++.+ ....||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~f-C~~C~~~~~~~~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSF-CRDCLRKWLENSGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEE-EHHHHHHHHHHTSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcc-hHHHHHHHHHhcCCccCCcC
Confidence 889999999999 88999999 9999999888 34589988
No 123
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.32 E-value=3.1e-07 Score=99.38 Aligned_cols=100 Identities=29% Similarity=0.389 Sum_probs=86.3
Q ss_pred HcCCCCcccC--CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccc
Q 010851 38 SQGASLEWMD--KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR 115 (499)
Q Consensus 38 ~~g~~~~~~d--~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 115 (499)
.+++++|+.+ ..|.|+||.|+.. |..-++++||+.|+++|.. |..|+||||.+...|+...+.+|++.|++.+..
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~-~~~~~~e~ll~~ga~vn~~--d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~ 718 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGT-GDSGAVELLLQNGADVNAL--DSKGRTPLHHATASGHTSIACLLLKRGADPNAF 718 (785)
T ss_pred cchhhhccchhhhcccchhhhhhcc-chHHHHHHHHhcCCcchhh--hccCCCcchhhhhhcccchhhhhcccccccccc
Confidence 3455566543 4689999999987 8899999999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH
Q 010851 116 NDDCHTALGVARIKGHINVVRAIES 140 (499)
Q Consensus 116 d~~g~tpL~~A~~~g~~~~v~~Ll~ 140 (499)
+.+|+++|++|....+.+++-+|.-
T Consensus 719 ~~~~~~~l~~a~~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 719 DPDGKLPLDIAMEAANADIVLLLRL 743 (785)
T ss_pred CccCcchhhHHhhhccccHHHHHhh
Confidence 9999999999988777776655543
No 124
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=98.31 E-value=4.7e-07 Score=61.31 Aligned_cols=43 Identities=44% Similarity=0.990 Sum_probs=35.6
Q ss_pred ccccccccCCceEEe-CCCCchhhHHhHHHHhcc-CCccccccccc
Q 010851 447 SCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK-KGDCPVCRTKI 490 (499)
Q Consensus 447 ~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i 490 (499)
.|.||++...+.+.+ +|||.| |..|+..+... ...||+||..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHVF-CRSCIDKWLKSGKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCChh-cHHHHHHHHHhCcCCCCCCCCcC
Confidence 499999998555555 599999 99999998876 66899998754
No 125
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.29 E-value=2.7e-06 Score=89.81 Aligned_cols=127 Identities=22% Similarity=0.172 Sum_probs=102.8
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHHcC----CCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 010851 48 KEGKTPLIVACMDSGLINVAKTLIELG----ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTAL 123 (499)
Q Consensus 48 ~~g~TpLh~Aa~~~g~~~~v~~Ll~~g----a~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL 123 (499)
..+.--...|+.+ |+.-.|+..++.. .++|.+ |.-|+++|++|+.+.+.+++++|++++... ..+|
T Consensus 23 ~~~e~~fL~a~E~-gd~~~V~k~l~~~~~~~lninc~--d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdAL 92 (822)
T KOG3609|consen 23 NEGEKGFLLAHEN-GDVPLVAKALEYKAVSKLNINCR--DPLGRLALHIAIDNENLELQELLLDTSSEE-------GDAL 92 (822)
T ss_pred chhhHHHHHHHHc-CChHHHHHHHHhccccccchhcc--ChHhhhceecccccccHHHHHHHhcCcccc-------chHH
Confidence 3455567889988 8888888888764 356666 889999999999999999999999987655 3589
Q ss_pred HHHHHcCCHHHHHHHHHccccccc--------ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCC
Q 010851 124 GVARIKGHINVVRAIESHICYFCG--------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKP 185 (499)
Q Consensus 124 ~~A~~~g~~~~v~~Ll~~g~~~~~--------~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~ 185 (499)
.+|+..|.+++|++|+.+...... ...-.-+.|||. +|+..+++||+++||.+|+.+...-
T Consensus 93 L~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPli-LAAh~NnyEil~~Ll~kg~~i~~PH 161 (822)
T KOG3609|consen 93 LLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLM-LAAHLNNFEILQCLLTRGHCIPIPH 161 (822)
T ss_pred HHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHH-HHHHhcchHHHHHHHHcCCCCCCCc
Confidence 999999999999999988644321 012245689999 9999999999999999999876543
No 126
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.28 E-value=3.1e-06 Score=73.73 Aligned_cols=96 Identities=23% Similarity=0.168 Sum_probs=68.4
Q ss_pred CCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccc
Q 010851 74 GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF 152 (499)
Q Consensus 74 ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 152 (499)
+.++|.+ |..||||||.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-+.|+.++++.|.+...+-.......
T Consensus 2 e~~in~r--D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~nss 79 (223)
T KOG2384|consen 2 EGNINAR--DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNSS 79 (223)
T ss_pred CCCccch--hhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcccCC
Confidence 4577877 788888888888888888888888888 8888888888888888888888888888887654433111223
Q ss_pred cCCCHHHHHhhhcCCHHHHHHHHhcCC
Q 010851 153 YGPSFLEALAPQLMSRKIWVVVIPCGT 179 (499)
Q Consensus 153 ~g~t~Lh~~A~~~~~~~~~~~Ll~~ga 179 (499)
.+.+++. .|+++..+.+..
T Consensus 80 ~~e~lfy--------CE~Cd~~ip~~~ 98 (223)
T KOG2384|consen 80 RDEALFY--------CEVCDIYIPNSK 98 (223)
T ss_pred CCCccch--------hhhhhhhccCCC
Confidence 3444443 355555555443
No 127
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.24 E-value=1.2e-06 Score=94.22 Aligned_cols=125 Identities=24% Similarity=0.161 Sum_probs=74.2
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHH-HcCCCCCccCCCCCCCcHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRGGTPL 90 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll-~~ga~~~~~~~d~~g~TpL 90 (499)
....|.+.||+++..++.-+++.+++- |......|.+|.-.+|+++. ++.+.+-+|+ -.|..++++ |..|+|||
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~--lg~ewA~ll~~~~~~ai~i~--D~~G~tpL 645 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA--LGYEWAFLPISADGVAIDIR--DRNGWTPL 645 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh--cCCceeEEEEeecccccccc--cCCCCccc
Confidence 445566666666666666666666663 55555556666666666442 4455554444 345666666 66666666
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCc------ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 91 HHAAKRGLEPTVRLLLSCGANAL------VRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 91 ~~A~~~g~~~~v~~Ll~~ga~~~------~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
|+|+.+|+..++..|++.|++.. ..+..|.|+-.+|..+|+..+.-+|-+.
T Consensus 646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 66666666666666666655432 2233466666666666666666665544
No 128
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.22 E-value=6.6e-07 Score=88.89 Aligned_cols=50 Identities=24% Similarity=0.549 Sum_probs=43.9
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+....|.||++.+.++++++|||.| |..|+..+......||+||..+..
T Consensus 23 Le~~l~C~IC~d~~~~PvitpCgH~F-Cs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 23 LDTSLRCHICKDFFDVPVLTSCSHTF-CSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred cccccCCCcCchhhhCccCCCCCCch-hHHHHHHHHhCCCCCCCCCCcccc
Confidence 34457999999999999999999999 999999988776789999998753
No 129
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=98.21 E-value=6.7e-07 Score=59.35 Aligned_cols=30 Identities=40% Similarity=0.934 Sum_probs=21.2
Q ss_pred cccccccCCc----eEEeCCCCchhhHHhHHHHhcc
Q 010851 448 CVICWEAPVE----GACVPCGHMAGCMSCLSEIKAK 479 (499)
Q Consensus 448 C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~ 479 (499)
|+||.| +.+ ++.++|||.| |..|++++...
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~-c~~cl~~l~~~ 34 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVF-CKDCLQKLSKK 34 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EE-EHHHHHHHHHH
T ss_pred CCcccc-ccCCCCCCEEEeCccHH-HHHHHHHHHhc
Confidence 899999 888 8999999999 99999999874
No 130
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=98.19 E-value=1.5e-06 Score=56.61 Aligned_cols=38 Identities=37% Similarity=0.988 Sum_probs=33.7
Q ss_pred cccccccCCceEEeCCCCchhhHHhHHHHhc-cCCccccc
Q 010851 448 CVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~C 486 (499)
|.||++....++.++|||.| |..|...+.. ....||+|
T Consensus 1 C~iC~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTF-CRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred CCcCccCCCCcEEecCCChH-HHHHHHHHHHhCcCCCCCC
Confidence 78999999999999999999 9999999876 45579987
No 131
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=98.19 E-value=1.3e-06 Score=64.19 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=41.4
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..|+||.+...+++..+|||.| |..|+..+......||+|+.++.
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~-~~~~i~~~~~~~~~cP~~~~~~~ 46 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTY-ERRAIEKWLLSHGTDPVTGQPLT 46 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEE-eHHHHHHHHHHCCCCCCCcCCCC
Confidence 4799999999999999999999 99999998877778999999884
No 132
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=8.2e-07 Score=81.22 Aligned_cols=45 Identities=44% Similarity=1.006 Sum_probs=39.1
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHh-ccCC-cccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIK-AKKG-DCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~-~~~~-~Cp~Cr~~i~ 491 (499)
..|.||++..-.+...||||.| |..|+...| .++. .||+||+.+.
T Consensus 216 ~kC~lC~e~~~~ps~t~CgHlF-C~~Cl~~~~t~~k~~~CplCRak~~ 262 (271)
T COG5574 216 YKCFLCLEEPEVPSCTPCGHLF-CLSCLLISWTKKKYEFCPLCRAKVY 262 (271)
T ss_pred cceeeeecccCCcccccccchh-hHHHHHHHHHhhccccCchhhhhcc
Confidence 6999999999999999999999 999999944 4443 5999999774
No 133
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.05 E-value=9.9e-06 Score=70.63 Aligned_cols=64 Identities=19% Similarity=0.132 Sum_probs=32.5
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQG-ASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL 73 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ 73 (499)
++|.+|.-|+|+||.|+..|+.+.+.+|+.+| +.+...|..|.+++.+|=+. |+.+++..|-++
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~-g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKG-GAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhc-ChHHHHHHHHHH
Confidence 44455555555555555555555555555555 44555555555555554443 555555555444
No 134
>KOG2164 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.05 E-value=2.4e-06 Score=85.41 Aligned_cols=52 Identities=29% Similarity=0.768 Sum_probs=43.6
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccC-----Cccccccccccc--eeEee
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-----GDCPVCRTKINQ--VIRLY 497 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-----~~Cp~Cr~~i~~--~~~~~ 497 (499)
...|+||++.+.-++...|||.| |..|+...|... +.||+||..|.- ...+|
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiF-C~~CiLqy~~~s~~~~~~~CPiC~s~I~~kdl~pv~ 244 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIF-CGPCILQYWNYSAIKGPCSCPICRSTITLKDLLPVF 244 (513)
T ss_pred CCcCCcccCCCCcccccccCcee-eHHHHHHHHhhhcccCCccCCchhhhccccceeeee
Confidence 46999999999999999999999 999999987653 479999998864 44443
No 135
>KOG0287 consensus Postreplication repair protein RAD18 [Replication, recombination and repair]
Probab=98.02 E-value=1.9e-06 Score=80.97 Aligned_cols=47 Identities=28% Similarity=0.655 Sum_probs=43.4
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
...|.||.|-+..+++.||+|.| |..|+......++.||.|+.++.+
T Consensus 23 lLRC~IC~eyf~ip~itpCsHtf-CSlCIR~~L~~~p~CP~C~~~~~E 69 (442)
T KOG0287|consen 23 LLRCGICFEYFNIPMITPCSHTF-CSLCIRKFLSYKPQCPTCCVTVTE 69 (442)
T ss_pred HHHHhHHHHHhcCceeccccchH-HHHHHHHHhccCCCCCceecccch
Confidence 36999999999999999999999 999999988888899999998863
No 136
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.00 E-value=6.1e-06 Score=89.01 Aligned_cols=128 Identities=15% Similarity=-0.030 Sum_probs=100.5
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCCCCcHHHHHHHcCCHHHHHHH-HHCCCCCcccCCCCCCH
Q 010851 45 WMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAAKRGLEPTVRLL-LSCGANALVRNDDCHTA 122 (499)
Q Consensus 45 ~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~L-l~~ga~~~~~d~~g~tp 122 (499)
...-.|+|-||+++.. +..-+++.+++- |...... |.+|.-.+|+++ .++.+++-+| .-.|..++.+|..|+||
T Consensus 569 ~~~~r~~lllhL~a~~-lyawLie~~~e~~~~~~~el--d~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tp 644 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAEL-LYAWLIEKVIEWAGSGDLEL--DRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTP 644 (975)
T ss_pred cCCCcchHHHHHHHHH-hHHHHHHHHhcccccCchhh--cccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcc
Confidence 3456789999999987 988999999986 6666666 677777888844 4555555444 45678899999999999
Q ss_pred HHHHHHcCCHHHHHHHHHccccccc----ccccccCCCHHHHHhhhcCCHHHHHHHHhc
Q 010851 123 LGVARIKGHINVVRAIESHICYFCG----WLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (499)
Q Consensus 123 L~~A~~~g~~~~v~~Ll~~g~~~~~----~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ 177 (499)
||+|+.+|+..++..|++.|++... ......|.|+-. +|..+++..+..+|-+.
T Consensus 645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~-la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD-LARANGHKGIAGYLSEK 702 (975)
T ss_pred cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh-hhhcccccchHHHHhhh
Confidence 9999999999999999988875441 123346888988 88899999998888765
No 137
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=97.96 E-value=6.6e-06 Score=62.07 Aligned_cols=41 Identities=34% Similarity=0.853 Sum_probs=33.6
Q ss_pred cccccccccC-------------CceEEeCCCCchhhHHhHHHHhccCCcccccc
Q 010851 446 SSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 487 (499)
Q Consensus 446 ~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr 487 (499)
..|.||++.. ..++..+|||.| ...|+.+|......||+||
T Consensus 20 d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~F-H~~Ci~~Wl~~~~~CP~CR 73 (73)
T PF12678_consen 20 DNCAICREPLEDPCPECQAPQDECPIVWGPCGHIF-HFHCISQWLKQNNTCPLCR 73 (73)
T ss_dssp SBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEE-EHHHHHHHHTTSSB-TTSS
T ss_pred CcccccChhhhChhhhhcCCccccceEecccCCCE-EHHHHHHHHhcCCcCCCCC
Confidence 4699999877 334556999999 9999999998888999997
No 138
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.96 E-value=2.1e-05 Score=75.47 Aligned_cols=56 Identities=38% Similarity=0.496 Sum_probs=29.3
Q ss_pred HHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q 010851 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANA 112 (499)
Q Consensus 54 Lh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~ 112 (499)
|.+||+. |..+.|+.|++.|.++|.+ |.....||.+|+..||.++|++||+.||-.
T Consensus 40 lceacR~-GD~d~v~~LVetgvnVN~v--D~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 40 LCEACRA-GDVDRVRYLVETGVNVNAV--DRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred HHHHhhc-ccHHHHHHHHHhCCCcchh--hcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 4455554 5555555555555555555 445555555555555555555555555433
No 139
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=97.96 E-value=3.5e-06 Score=77.51 Aligned_cols=46 Identities=28% Similarity=0.547 Sum_probs=42.6
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..|-||.+.+..++..+|||.| |..|+.+.....+.||+||.+...
T Consensus 26 lrC~IC~~~i~ip~~TtCgHtF-CslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 26 LRCRICDCRISIPCETTCGHTF-CSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred HHhhhhhheeecceecccccch-hHHHHHHHhcCCCCCccccccHHh
Confidence 6999999999999999999999 999999988878899999998764
No 140
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.91 E-value=3e-05 Score=74.40 Aligned_cols=76 Identities=30% Similarity=0.308 Sum_probs=63.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g 97 (499)
.--|+.|++.|+++.|++|++.|.++|..|....+||.+|+.. ||.++|++||+.|+--..- ..+|... |+++.+.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLc-GHe~vvklLLenGAiC~rd--tf~G~RC-~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLC-GHEDVVKLLLENGAICSRD--TFDGDRC-HYGALND 112 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHc-CcHHHHHHHHHcCCccccc--ccCcchh-hhhhhhH
Confidence 4558999999999999999999999999999999999999998 9999999999999865432 3445443 5555543
No 141
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=2.7e-06 Score=89.25 Aligned_cols=52 Identities=23% Similarity=0.596 Sum_probs=45.6
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc--ceeEee
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~--~~~~~~ 497 (499)
...|++|-+++.+++...|||.| |..|+...... .++||.|...|. .+.+||
T Consensus 643 ~LkCs~Cn~R~Kd~vI~kC~H~F-C~~Cvq~r~etRqRKCP~Cn~aFganDv~~I~ 697 (698)
T KOG0978|consen 643 LLKCSVCNTRWKDAVITKCGHVF-CEECVQTRYETRQRKCPKCNAAFGANDVHRIH 697 (698)
T ss_pred ceeCCCccCchhhHHHHhcchHH-HHHHHHHHHHHhcCCCCCCCCCCCcccccccC
Confidence 36999999999999999999999 99999887665 468999999995 677776
No 142
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.80 E-value=9.1e-06 Score=75.47 Aligned_cols=49 Identities=29% Similarity=0.657 Sum_probs=40.5
Q ss_pred CCCccccccccccCC---ceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010851 442 DGSSSSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 491 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~ 491 (499)
.+...+|.|||+.+. ..+.+||.|.| ...|+.+|.. .+.+||+||.++.
T Consensus 320 a~~GveCaICms~fiK~d~~~vlPC~H~F-H~~Cv~kW~~~y~~~CPvCrt~iP 372 (374)
T COG5540 320 ADKGVECAICMSNFIKNDRLRVLPCDHRF-HVGCVDKWLLGYSNKCPVCRTAIP 372 (374)
T ss_pred cCCCceEEEEhhhhcccceEEEeccCcee-chhHHHHHHhhhcccCCccCCCCC
Confidence 344479999999763 35678999999 9999999987 5779999999874
No 143
>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=7e-06 Score=74.89 Aligned_cols=48 Identities=27% Similarity=0.665 Sum_probs=43.0
Q ss_pred ccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010851 447 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 498 (499)
Q Consensus 447 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~ 498 (499)
.|..|-++...++++||.|.++|..|...+.. ||+|+.+....+.+|.
T Consensus 160 ~Cr~C~~~~~~VlllPCrHl~lC~~C~~~~~~----CPiC~~~~~s~~~v~~ 207 (207)
T KOG1100|consen 160 SCRKCGEREATVLLLPCRHLCLCGICDESLRI----CPICRSPKTSSVEVNF 207 (207)
T ss_pred cceecCcCCceEEeecccceEecccccccCcc----CCCCcChhhceeeccC
Confidence 49999999999999999999999999876544 9999999999888873
No 144
>KOG0824 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=1e-05 Score=75.33 Aligned_cols=48 Identities=29% Similarity=0.643 Sum_probs=42.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccccee
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~~~ 494 (499)
.+|.||+.....++.++|+|.| |+.|++..... ++.|++||.+|.+.|
T Consensus 8 ~eC~IC~nt~n~Pv~l~C~HkF-CyiCiKGsy~ndk~~CavCR~pids~i 56 (324)
T KOG0824|consen 8 KECLICYNTGNCPVNLYCFHKF-CYICIKGSYKNDKKTCAVCRFPIDSTI 56 (324)
T ss_pred CcceeeeccCCcCccccccchh-hhhhhcchhhcCCCCCceecCCCCcch
Confidence 5999999999999999999999 99999886655 456999999998755
No 145
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=97.73 E-value=1.2e-05 Score=77.17 Aligned_cols=48 Identities=35% Similarity=0.794 Sum_probs=42.9
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccccee
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~~~~ 494 (499)
..|.||-|+.+++...||||.. |..|...|+.. ...||.||..|+..-
T Consensus 370 eLCKICaendKdvkIEPCGHLl-Ct~CLa~WQ~sd~gq~CPFCRcEIKGte 419 (563)
T KOG1785|consen 370 ELCKICAENDKDVKIEPCGHLL-CTSCLAAWQDSDEGQTCPFCRCEIKGTE 419 (563)
T ss_pred HHHHHhhccCCCcccccccchH-HHHHHHhhcccCCCCCCCceeeEecccc
Confidence 5999999999999999999999 99999999865 357999999998543
No 146
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=2.4e-05 Score=74.68 Aligned_cols=44 Identities=30% Similarity=0.890 Sum_probs=38.0
Q ss_pred cccccccccC-------------CceEEeCCCCchhhHHhHHHHhccCCccccccccc
Q 010851 446 SSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI 490 (499)
Q Consensus 446 ~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i 490 (499)
+.|.||+|.. +.+.-+||||.+ ..+|.+.|......||+||.++
T Consensus 288 ~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHil-Hl~CLknW~ERqQTCPICr~p~ 344 (491)
T COG5243 288 RTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHIL-HLHCLKNWLERQQTCPICRRPV 344 (491)
T ss_pred CeEEEecccccCCCCccCcccccCCccccccccee-eHHHHHHHHHhccCCCcccCcc
Confidence 7999999972 234568999999 9999999998888899999995
No 147
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.61 E-value=2.9e-05 Score=73.50 Aligned_cols=51 Identities=27% Similarity=0.785 Sum_probs=44.4
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 494 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 494 (499)
.++..|+||+..+...+|.||+|.- |..|+.+..-..+.|-.|+..+...+
T Consensus 420 sEd~lCpICyA~pi~Avf~PC~H~S-C~~CI~qHlmN~k~CFfCktTv~~~~ 470 (489)
T KOG4692|consen 420 SEDNLCPICYAGPINAVFAPCSHRS-CYGCITQHLMNCKRCFFCKTTVIDVI 470 (489)
T ss_pred cccccCcceecccchhhccCCCCch-HHHHHHHHHhcCCeeeEecceeeehh
Confidence 3447999999999999999999999 99999997766778999999887543
No 148
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.59 E-value=4.1e-05 Score=74.32 Aligned_cols=46 Identities=30% Similarity=0.768 Sum_probs=38.6
Q ss_pred cccccccccCCce---EEeCCCCchhhHHhHHHHhccCC-ccccccccccc
Q 010851 446 SSCVICWEAPVEG---ACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKINQ 492 (499)
Q Consensus 446 ~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~~~~~~-~Cp~Cr~~i~~ 492 (499)
..|.||+|..... ..+||+|.| ...|+..|..+.+ .||+|+..+..
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~F-H~~CIDpWL~~~r~~CPvCK~di~~ 279 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKF-HVNCIDPWLTQTRTFCPVCKRDIRT 279 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCch-hhccchhhHhhcCccCCCCCCcCCC
Confidence 4999999987544 567999999 9999999998754 69999998753
No 149
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=97.50 E-value=0.0001 Score=55.72 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=38.8
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 492 (499)
+...|+||.+...++|.+||||.| +..|+.+|... ...||+|+.++..
T Consensus 3 ~~f~CpIt~~lM~dPVi~~~G~ty-er~~I~~~l~~~~~~~P~t~~~l~~ 51 (73)
T PF04564_consen 3 DEFLCPITGELMRDPVILPSGHTY-ERSAIERWLEQNGGTDPFTRQPLSE 51 (73)
T ss_dssp GGGB-TTTSSB-SSEEEETTSEEE-EHHHHHHHHCTTSSB-TTT-SB-SG
T ss_pred cccCCcCcCcHhhCceeCCcCCEE-cHHHHHHHHHcCCCCCCCCCCcCCc
Confidence 346999999999999999999999 99999999987 6789999998864
No 150
>KOG2177 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.43 E-value=5e-05 Score=75.40 Aligned_cols=45 Identities=38% Similarity=0.775 Sum_probs=39.3
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 488 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~ 488 (499)
.+...|+||++.+..+.++||||.| |..|+..++...-.||.||.
T Consensus 11 ~~~~~C~iC~~~~~~p~~l~C~H~~-c~~C~~~~~~~~~~Cp~cr~ 55 (386)
T KOG2177|consen 11 QEELTCPICLEYFREPVLLPCGHNF-CRACLTRSWEGPLSCPVCRP 55 (386)
T ss_pred cccccChhhHHHhhcCccccccchH-hHHHHHHhcCCCcCCcccCC
Confidence 4557999999999999999999999 99999998863347999993
No 151
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=97.41 E-value=0.00014 Score=68.83 Aligned_cols=57 Identities=33% Similarity=0.747 Sum_probs=46.2
Q ss_pred CCCCCCCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccccee
Q 010851 437 SNVKDDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKINQVI 494 (499)
Q Consensus 437 ~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~~~~ 494 (499)
+....+++...|.||-+...-...+||+|.. |..|+-++... .+.|++||..-..++
T Consensus 53 SaddtDEen~~C~ICA~~~TYs~~~PC~H~~-CH~Ca~RlRALY~~K~C~~CrTE~e~V~ 111 (493)
T COG5236 53 SADDTDEENMNCQICAGSTTYSARYPCGHQI-CHACAVRLRALYMQKGCPLCRTETEAVV 111 (493)
T ss_pred cccccccccceeEEecCCceEEEeccCCchH-HHHHHHHHHHHHhccCCCccccccceEE
Confidence 3444456778999999999999999999999 99999888754 568999998765443
No 152
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=97.16 E-value=9.1e-05 Score=52.77 Aligned_cols=43 Identities=35% Similarity=0.859 Sum_probs=23.1
Q ss_pred cccccccccCCceEE-eCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 446 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..|.+|.+....++. ..|.|+| |..|+..-- ...||+|+.+..
T Consensus 8 LrCs~C~~~l~~pv~l~~CeH~f-Cs~Ci~~~~--~~~CPvC~~Paw 51 (65)
T PF14835_consen 8 LRCSICFDILKEPVCLGGCEHIF-CSSCIRDCI--GSECPVCHTPAW 51 (65)
T ss_dssp TS-SSS-S--SS-B---SSS--B--TTTGGGGT--TTB-SSS--B-S
T ss_pred cCCcHHHHHhcCCceeccCccHH-HHHHhHHhc--CCCCCCcCChHH
Confidence 589999999999975 5899999 999986632 235999998874
No 153
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=97.14 E-value=0.00044 Score=52.70 Aligned_cols=32 Identities=31% Similarity=0.709 Sum_probs=26.7
Q ss_pred EEeCCCCchhhHHhHHHHhcc---CCcccccccccc
Q 010851 459 ACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN 491 (499)
Q Consensus 459 ~~~pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~ 491 (499)
+.-.|+|.| ...|+.++..+ +..||+||++..
T Consensus 48 v~g~C~H~F-H~hCI~kWl~~~~~~~~CPmCR~~w~ 82 (85)
T PF12861_consen 48 VWGKCSHNF-HMHCILKWLSTQSSKGQCPMCRQPWK 82 (85)
T ss_pred eeccCccHH-HHHHHHHHHccccCCCCCCCcCCeee
Confidence 445899999 99999998874 468999999764
No 154
>KOG0311 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.09 E-value=7.2e-05 Score=71.38 Aligned_cols=51 Identities=24% Similarity=0.544 Sum_probs=40.4
Q ss_pred CCccccccccccCCceEEe-CCCCchhhHHhHHHHhc-cCCcccccccccccee
Q 010851 443 GSSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKA-KKGDCPVCRTKINQVI 494 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~~~~ 494 (499)
.....|.||++........ -|+|+| |+.|+..-.+ ....||.||+...+..
T Consensus 41 ~~~v~c~icl~llk~tmttkeClhrf-c~~ci~~a~r~gn~ecptcRk~l~Skr 93 (381)
T KOG0311|consen 41 DIQVICPICLSLLKKTMTTKECLHRF-CFDCIWKALRSGNNECPTCRKKLVSKR 93 (381)
T ss_pred hhhhccHHHHHHHHhhcccHHHHHHH-HHHHHHHHHHhcCCCCchHHhhccccc
Confidence 3446999999988766655 699999 9999987554 4668999999887543
No 155
>KOG0802 consensus E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.00023 Score=75.61 Aligned_cols=46 Identities=35% Similarity=0.768 Sum_probs=41.1
Q ss_pred ccccccccccCCc-----eEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE-----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~-----~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||+|.... +..+||+|.| |..|...|-+....||+||..+.
T Consensus 291 ~~~C~IC~e~l~~~~~~~~~rL~C~Hif-h~~CL~~W~er~qtCP~CR~~~~ 341 (543)
T KOG0802|consen 291 DELCIICLEELHSGHNITPKRLPCGHIF-HDSCLRSWFERQQTCPTCRTVLY 341 (543)
T ss_pred CCeeeeechhhccccccccceeecccch-HHHHHHHHHHHhCcCCcchhhhh
Confidence 4699999999888 6888999999 99999999998889999999443
No 156
>KOG4159 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.00 E-value=0.00035 Score=69.81 Aligned_cols=49 Identities=31% Similarity=0.807 Sum_probs=43.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..+-.|+||+..+..++..||||-+ |..|+.+...++..||.||..+.+
T Consensus 82 ~sef~c~vc~~~l~~pv~tpcghs~-c~~Cl~r~ld~~~~cp~Cr~~l~e 130 (398)
T KOG4159|consen 82 RSEFECCVCSRALYPPVVTPCGHSF-CLECLDRSLDQETECPLCRDELVE 130 (398)
T ss_pred cchhhhhhhHhhcCCCccccccccc-cHHHHHHHhccCCCCccccccccc
Confidence 4447999999999999999999999 999999977777899999998875
No 157
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=96.94 E-value=0.00025 Score=48.83 Aligned_cols=44 Identities=32% Similarity=0.886 Sum_probs=36.2
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|..|.......+++||||.. |..|.....- ..||+|..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~pCgH~I-~~~~f~~~rY--ngCPfC~~~~~ 50 (55)
T PF14447_consen 7 EQPCVFCGFVGTKGTVLPCGHLI-CDNCFPGERY--NGCPFCGTPFE 50 (55)
T ss_pred ceeEEEcccccccccccccccee-eccccChhhc--cCCCCCCCccc
Confidence 36899999998889999999999 9999654332 24999999886
No 158
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.92 E-value=0.0004 Score=67.90 Aligned_cols=49 Identities=31% Similarity=0.696 Sum_probs=40.9
Q ss_pred ccccccccccCCceE-----E---eCCCCchhhHHhHHHHhc--c-----CCcccccccccccee
Q 010851 445 SSSCVICWEAPVEGA-----C---VPCGHMAGCMSCLSEIKA--K-----KGDCPVCRTKINQVI 494 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~-----~---~pCgH~~~C~~C~~~~~~--~-----~~~Cp~Cr~~i~~~~ 494 (499)
+..|.||++.....+ + .+|.|.| |..|+..|.. + .+.||.||.+...++
T Consensus 161 ~k~CGICme~i~ek~~~~~rfgilpnC~H~~-Cl~Cir~wr~~~q~~~~~sksCP~CRv~s~~v~ 224 (344)
T KOG1039|consen 161 EKECGICMETINEKAASERRFGILPNCNHSF-CLNCIRKWRQATQFESKTSKSCPFCRVPSSFVN 224 (344)
T ss_pred cccceehhhhccccchhhhhcccCCCcchhh-hhcHhHhhhhhhccccccccCCCcccCcccccc
Confidence 469999999887777 5 6799999 9999999993 3 368999999877654
No 159
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.72 E-value=0.0029 Score=37.00 Aligned_cols=22 Identities=55% Similarity=0.715 Sum_probs=8.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHCC
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCG 109 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~g 109 (499)
||||+|+..++.+++++|++.|
T Consensus 4 ~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 4 TPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CHHHHHHHcCCHHHHHHHHHcC
Confidence 3344443334444444333333
No 160
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.70 E-value=0.003 Score=37.00 Aligned_cols=27 Identities=44% Similarity=0.758 Sum_probs=15.1
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCC
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANI 77 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~ 77 (499)
|.||||+|+.. ++.+++++|++++.++
T Consensus 2 ~~~~l~~~~~~-~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAEN-GNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHc-CCHHHHHHHHHcCCCC
Confidence 45555555554 5555555555555544
No 161
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.56 E-value=0.0037 Score=62.57 Aligned_cols=64 Identities=20% Similarity=0.137 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCCCcc----CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 010851 64 INVAKTLIELGANINAY----RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR 127 (499)
Q Consensus 64 ~~~v~~Ll~~ga~~~~~----~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 127 (499)
...+++|.+++.+.|.. ..+..-.|+||+|+..|..++|.+||+.|+|+...|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 45556666666555442 01223456777777777777777777777777777777777766665
No 162
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.53 E-value=0.0022 Score=59.28 Aligned_cols=46 Identities=26% Similarity=0.803 Sum_probs=37.3
Q ss_pred ccccccccccCCceEEe-CCCCchhhHHhHHHHhc--cCCcccccccccc
Q 010851 445 SSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKA--KKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~--~~~~Cp~Cr~~i~ 491 (499)
..+|++|-+.+..+... +|||++ |..|+..-.. ..-.||.|...+.
T Consensus 239 ~~~C~~Cg~~PtiP~~~~~C~Hiy-CY~Ci~ts~~~~asf~Cp~Cg~~~~ 287 (298)
T KOG2879|consen 239 DTECPVCGEPPTIPHVIGKCGHIY-CYYCIATSRLWDASFTCPLCGENVE 287 (298)
T ss_pred CceeeccCCCCCCCeeecccccee-ehhhhhhhhcchhhcccCccCCCCc
Confidence 36999999999999766 699999 9999876433 2347999988776
No 163
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.49 E-value=0.0022 Score=61.47 Aligned_cols=30 Identities=37% Similarity=0.972 Sum_probs=25.6
Q ss_pred CCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010851 462 PCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 492 (499)
Q Consensus 462 pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 492 (499)
+|||.| |..|+.+++.. ...||.|+.++..
T Consensus 25 ~CGH~~-C~sCv~~l~~~~~~~CP~C~~~lrk 55 (309)
T TIGR00570 25 VCGHTL-CESCVDLLFVRGSGSCPECDTPLRK 55 (309)
T ss_pred CCCCcc-cHHHHHHHhcCCCCCCCCCCCccch
Confidence 899999 99999998754 4589999998863
No 164
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.42 E-value=0.0066 Score=60.86 Aligned_cols=62 Identities=15% Similarity=0.046 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCCc------ccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhh
Q 010851 99 EPTVRLLLSCGANAL------VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAP 163 (499)
Q Consensus 99 ~~~v~~Ll~~ga~~~------~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~ 163 (499)
...+++|.+++++.| ..+..--|+||+|+..|..++|.+||+.|+|.. .+|..|+||.. ++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~--~kd~~Grtpy~-ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPS--TKDGAGRTPYS-LSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCch--hcccCCCCccc-ccc
Confidence 345666666665543 233445577777777777777777777777777 77777777777 443
No 165
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=96.36 E-value=0.0015 Score=57.12 Aligned_cols=48 Identities=25% Similarity=0.464 Sum_probs=41.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 494 (499)
-.|.||......+|+..|||-| |..|+.+-.+....|-+|.+.....+
T Consensus 197 F~C~iCKkdy~spvvt~CGH~F-C~~Cai~~y~kg~~C~~Cgk~t~G~f 244 (259)
T COG5152 197 FLCGICKKDYESPVVTECGHSF-CSLCAIRKYQKGDECGVCGKATYGRF 244 (259)
T ss_pred eeehhchhhccchhhhhcchhH-HHHHHHHHhccCCcceecchhhccce
Confidence 4999999999999999999999 99999887666678999988665433
No 166
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=96.05 E-value=0.0034 Score=42.37 Aligned_cols=42 Identities=31% Similarity=0.755 Sum_probs=20.7
Q ss_pred cccccccC--CceEEe--CCCCchhhHHhHHHHhc-cCCccccccccc
Q 010851 448 CVICWEAP--VEGACV--PCGHMAGCMSCLSEIKA-KKGDCPVCRTKI 490 (499)
Q Consensus 448 C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i 490 (499)
|++|.+.. .+..+. +||+.+ |..|..++.. ..+.||-||++.
T Consensus 1 cp~C~e~~d~~d~~~~PC~Cgf~I-C~~C~~~i~~~~~g~CPgCr~~Y 47 (48)
T PF14570_consen 1 CPLCDEELDETDKDFYPCECGFQI-CRFCYHDILENEGGRCPGCREPY 47 (48)
T ss_dssp -TTTS-B--CCCTT--SSTTS-----HHHHHHHTTSS-SB-TTT--B-
T ss_pred CCCcccccccCCCccccCcCCCcH-HHHHHHHHHhccCCCCCCCCCCC
Confidence 56666654 333455 577888 9999999986 477999999874
No 167
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.02 E-value=0.0021 Score=60.16 Aligned_cols=48 Identities=25% Similarity=0.527 Sum_probs=41.8
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 494 (499)
..|-||...+.++|...|+|.| |..|+..-.+....|.+|.+.+...+
T Consensus 242 f~c~icr~~f~~pVvt~c~h~f-c~~ca~~~~qk~~~c~vC~~~t~g~~ 289 (313)
T KOG1813|consen 242 FKCFICRKYFYRPVVTKCGHYF-CEVCALKPYQKGEKCYVCSQQTHGSF 289 (313)
T ss_pred ccccccccccccchhhcCCcee-ehhhhccccccCCcceeccccccccc
Confidence 4799999999999999999999 99998886666678999998876543
No 168
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.79 E-value=0.0041 Score=62.02 Aligned_cols=48 Identities=31% Similarity=0.616 Sum_probs=37.5
Q ss_pred CCccccccccccC-----------------CceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 443 GSSSSCVICWEAP-----------------VEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~-----------------~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
.....|+|||... .+..+.||.|.| -..|.++|-.. +-.||+||.++.
T Consensus 569 ~~t~dC~ICMt~I~l~~~~s~~~~~~~~~~~nYm~tPC~Hif-H~~CL~~WMd~ykl~CPvCR~pLP 634 (636)
T KOG0828|consen 569 RRTNDCVICMTPIDLRSTGSDCMVASMMVRRNYMLTPCHHIF-HRQCLLQWMDTYKLICPVCRCPLP 634 (636)
T ss_pred hccccceEeccccceeeccCcchhhhhhhhccccccchHHHH-HHHHHHHHHhhhcccCCccCCCCC
Confidence 4457999999632 224456999999 99999999885 558999999874
No 169
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=95.56 E-value=0.0032 Score=66.09 Aligned_cols=52 Identities=21% Similarity=0.391 Sum_probs=43.0
Q ss_pred CccccccccccCCceEE---eCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010851 444 SSSSCVICWEAPVEGAC---VPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~---~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
....|++|+....+... .+|+|.| |..|+..|.+-...||+||..+.+++.+
T Consensus 122 ~~~~CP~Ci~s~~DqL~~~~k~c~H~F-C~~Ci~sWsR~aqTCPiDR~EF~~v~V~ 176 (1134)
T KOG0825|consen 122 VENQCPNCLKSCNDQLEESEKHTAHYF-CEECVGSWSRCAQTCPVDRGEFGEVKVL 176 (1134)
T ss_pred hhhhhhHHHHHHHHHhhcccccccccc-HHHHhhhhhhhcccCchhhhhhheeeee
Confidence 44689999987766543 3899999 9999999998777899999999877655
No 170
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=95.53 E-value=0.0085 Score=56.90 Aligned_cols=46 Identities=33% Similarity=0.870 Sum_probs=35.8
Q ss_pred ccccccccccC--CceEEe--CCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 445 SSSCVICWEAP--VEGACV--PCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
+..|+.|+|.- .+--|. |||... |.+|...+++. .++||-||....
T Consensus 14 ed~cplcie~mditdknf~pc~cgy~i-c~fc~~~irq~lngrcpacrr~y~ 64 (480)
T COG5175 14 EDYCPLCIEPMDITDKNFFPCPCGYQI-CQFCYNNIRQNLNGRCPACRRKYD 64 (480)
T ss_pred cccCcccccccccccCCcccCCcccHH-HHHHHHHHHhhccCCChHhhhhcc
Confidence 35699999864 344454 678888 99999998864 679999999775
No 171
>KOG3002 consensus Zn finger protein [General function prediction only]
Probab=95.32 E-value=0.0083 Score=57.95 Aligned_cols=45 Identities=31% Similarity=0.813 Sum_probs=37.5
Q ss_pred CCccccccccccCCceEEeCC--CCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPC--GHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pC--gH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+..+|+||.+....+++ .| ||.. |..|..++.. +||.||.++..
T Consensus 46 ~~lleCPvC~~~l~~Pi~-QC~nGHla-CssC~~~~~~---~CP~Cr~~~g~ 92 (299)
T KOG3002|consen 46 LDLLDCPVCFNPLSPPIF-QCDNGHLA-CSSCRTKVSN---KCPTCRLPIGN 92 (299)
T ss_pred hhhccCchhhccCcccce-ecCCCcEe-hhhhhhhhcc---cCCcccccccc
Confidence 344799999999999988 56 7999 9999876655 69999999873
No 172
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.19 E-value=0.0087 Score=55.18 Aligned_cols=45 Identities=24% Similarity=0.575 Sum_probs=36.4
Q ss_pred cccccccccCCceE----------EeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010851 446 SSCVICWEAPVEGA----------CVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~----------~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 491 (499)
..|.||-...-..+ -+.|+|.| -..|+..|+.. +..||+|++.|+
T Consensus 225 ~vCaVCg~~~~~s~~eegvienty~LsCnHvF-HEfCIrGWcivGKkqtCPYCKekVd 281 (328)
T KOG1734|consen 225 SVCAVCGQQIDVSVDEEGVIENTYKLSCNHVF-HEFCIRGWCIVGKKQTCPYCKEKVD 281 (328)
T ss_pred chhHhhcchheeecchhhhhhhheeeecccch-HHHhhhhheeecCCCCCchHHHHhh
Confidence 58999987654333 56999999 99999999975 457999998876
No 173
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=95.13 E-value=0.022 Score=48.61 Aligned_cols=51 Identities=29% Similarity=0.701 Sum_probs=37.6
Q ss_pred cccccccccCCceEEeCCC-Cchh-----------hHHhHHHHhcc-------------------------------CCc
Q 010851 446 SSCVICWEAPVEGACVPCG-HMAG-----------CMSCLSEIKAK-------------------------------KGD 482 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCg-H~~~-----------C~~C~~~~~~~-------------------------------~~~ 482 (499)
..|+||||-+=+.|++-|. |.-. -..|..+.++. +..
T Consensus 3 ~~CpICme~PHNAVLLlCSS~~kgcRpymc~Ts~rhSNCLdqfkka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 82 (162)
T PF07800_consen 3 VTCPICMEHPHNAVLLLCSSHEKGCRPYMCDTSYRHSNCLDQFKKAYGKSSSSSSQSSSSAPSDSSSSESSESQEQPELA 82 (162)
T ss_pred ccCceeccCCCceEEEEeccccCCccccccCCccchhHHHHHHHHHhcCCCCccccccccCcCCCccccccccccccccc
Confidence 5899999999999998765 3322 24677666541 125
Q ss_pred cccccccccceeEe
Q 010851 483 CPVCRTKINQVIRL 496 (499)
Q Consensus 483 Cp~Cr~~i~~~~~~ 496 (499)
||+||..|...+.+
T Consensus 83 CPLCRG~V~GWtvv 96 (162)
T PF07800_consen 83 CPLCRGEVKGWTVV 96 (162)
T ss_pred CccccCceeceEEc
Confidence 99999999987766
No 174
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=94.98 E-value=0.017 Score=57.21 Aligned_cols=41 Identities=32% Similarity=0.662 Sum_probs=32.2
Q ss_pred cccccccccCCce----EEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010851 446 SSCVICWEAPVEG----ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 446 ~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
..|+||+|+--.- +...|.|-| -..|..+|+.. .||+||--
T Consensus 176 PTCpVCLERMD~s~~gi~t~~c~Hsf-h~~cl~~w~~~--scpvcR~~ 220 (493)
T KOG0804|consen 176 PTCPVCLERMDSSTTGILTILCNHSF-HCSCLMKWWDS--SCPVCRYC 220 (493)
T ss_pred CCcchhHhhcCccccceeeeeccccc-chHHHhhcccC--cChhhhhh
Confidence 5999999876322 456899999 77899999874 59999853
No 175
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.80 E-value=0.022 Score=51.84 Aligned_cols=48 Identities=17% Similarity=0.333 Sum_probs=40.7
Q ss_pred CccccccccccCCce----EEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 444 SSSSCVICWEAPVEG----ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..-.|+||.+...+. ++-||||++ |.+|.+++.+....||+|-.+...
T Consensus 220 ~ryiCpvtrd~LtNt~~ca~Lr~sg~Vv-~~ecvEklir~D~v~pv~d~plkd 271 (303)
T KOG3039|consen 220 KRYICPVTRDTLTNTTPCAVLRPSGHVV-TKECVEKLIRKDMVDPVTDKPLKD 271 (303)
T ss_pred cceecccchhhhcCccceEEeccCCcEe-eHHHHHHhccccccccCCCCcCcc
Confidence 446999999987554 455999999 999999999888899999998864
No 176
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.66 E-value=0.27 Score=43.42 Aligned_cols=139 Identities=17% Similarity=0.090 Sum_probs=94.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g 97 (499)
.-.|..|+.++-+.+++++-+...+- -...++..-.||+. .+.|+|+.+ |-++... +-.+-+-.|....
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~-qkydiV~WI---~qnL~i~----~~~~iFdIA~~~k 115 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEE-QKYDIVKWI---GQNLHIY----NPEDIFDIAFAKK 115 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHH-ccccHHHHH---hhccCCC----Cchhhhhhhhhcc
Confidence 34677888999999988876643211 13456788899987 789999988 3344433 2235667788887
Q ss_pred CHHHH----HHHHHCCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHH
Q 010851 98 LEPTV----RLLLSCGANALVRNDD--CHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIW 171 (499)
Q Consensus 98 ~~~~v----~~Ll~~ga~~~~~d~~--g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~ 171 (499)
..++. .+++++...-...|.. =.--|..|+..|-...|...+++|.+++ .++|- .|+..++.+++
T Consensus 116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~--------~~vls-~Av~ynhRkIL 186 (192)
T PF03158_consen 116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD--------IIVLS-QAVKYNHRKIL 186 (192)
T ss_pred chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc--------HHHHH-HHHHhhHHHHH
Confidence 77652 2333332111001100 0023678999999999999999998876 37888 89999999999
Q ss_pred HHHHh
Q 010851 172 VVVIP 176 (499)
Q Consensus 172 ~~Ll~ 176 (499)
.+++.
T Consensus 187 ~yfi~ 191 (192)
T PF03158_consen 187 DYFIR 191 (192)
T ss_pred HHhhc
Confidence 98874
No 177
>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]
Probab=94.31 E-value=0.016 Score=58.71 Aligned_cols=48 Identities=33% Similarity=0.752 Sum_probs=42.0
Q ss_pred CccccccccccCCceEE-eCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 444 SSSSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+..|++|.....+++. ..|||.| |..|...+......||.|+..+..
T Consensus 20 ~~l~C~~C~~vl~~p~~~~~cgh~f-C~~C~~~~~~~~~~cp~~~~~~~~ 68 (391)
T KOG0297|consen 20 ENLLCPICMSVLRDPVQTTTCGHRF-CAGCLLESLSNHQKCPVCRQELTQ 68 (391)
T ss_pred ccccCccccccccCCCCCCCCCCcc-cccccchhhccCcCCcccccccch
Confidence 44799999999999998 4999999 999999988877789999887654
No 178
>PF04641 Rtf2: Rtf2 RING-finger
Probab=94.21 E-value=0.05 Score=52.07 Aligned_cols=52 Identities=27% Similarity=0.448 Sum_probs=39.5
Q ss_pred CCccccccccccC----CceEEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEe
Q 010851 443 GSSSSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRL 496 (499)
Q Consensus 443 ~~~~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~ 496 (499)
...-.|+|....+ .-+++.||||+| +..++..+. ....||+|..++. .+|.|
T Consensus 111 ~~~~~CPvt~~~~~~~~~fv~l~~cG~V~-s~~alke~k-~~~~Cp~c~~~f~~~DiI~L 168 (260)
T PF04641_consen 111 EGRFICPVTGKEFNGKHKFVYLRPCGCVF-SEKALKELK-KSKKCPVCGKPFTEEDIIPL 168 (260)
T ss_pred CceeECCCCCcccCCceeEEEEcCCCCEe-eHHHHHhhc-ccccccccCCccccCCEEEe
Confidence 3446999998766 334555999999 999999996 3457999999986 34544
No 179
>KOG3579 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=94.02 E-value=0.096 Score=48.83 Aligned_cols=31 Identities=29% Similarity=0.641 Sum_probs=27.5
Q ss_pred cccccccccCCceEEeCCC----CchhhHHhHHHHh
Q 010851 446 SSCVICWEAPVEGACVPCG----HMAGCMSCLSEIK 477 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCg----H~~~C~~C~~~~~ 477 (499)
..|.+|.|+..|..|+.|- |.| |+.|...-.
T Consensus 269 LcCTLC~ERLEDTHFVQCPSVp~HKF-CFPCSResI 303 (352)
T KOG3579|consen 269 LCCTLCHERLEDTHFVQCPSVPSHKF-CFPCSRESI 303 (352)
T ss_pred eeehhhhhhhccCceeecCCCcccce-ecccCHHHH
Confidence 6999999999999999995 999 999987633
No 180
>KOG1001 consensus Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily [Transcription; Replication, recombination and repair]
Probab=93.98 E-value=0.027 Score=60.81 Aligned_cols=44 Identities=30% Similarity=0.720 Sum_probs=37.9
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 491 (499)
..|.+|++ ...++..+|||.+ |.+|....... ...||+||..+.
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~-c~~c~~~~i~~~~~~~~~~cr~~l~ 500 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDF-CVECLKKSIQQSENAPCPLCRNVLK 500 (674)
T ss_pred cccccccc-cccceeecccchH-HHHHHHhccccccCCCCcHHHHHHH
Confidence 69999999 8888888999999 99999887664 337999998775
No 181
>smart00744 RINGv The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity. The RING-variant domain is reminiscent of both the RING and the PHD domains and may represent an evolutionary intermediate. To describe this domain the term PHD/LAP domain has been used in the past. Extended description: The RING-variant (RINGv) domain contains a C4HC3 zinc-finger-like motif similar to the PHD domain, while some of the spacing between the Cys/His residues follow a pattern somewhat closer to that found in the RING domain. The RINGv domain, similar to the RING, PHD and LIM domains, is thought to bind two zinc ions co-ordinated by the highly conserved Cys and His residues. RING variant domain: C-x (2) -C-x(10-45)-C-x (1) -C-x (7) -H-x(2)-C-x(11-25)-C-x(2)-C As opposed to a PHD: C-x(1-2) -C-x (7-13)-C-x(2-4)-C-x(4-5)-H-x(2)-C-x(10-21)-C-x(2)-C Class
Probab=93.88 E-value=0.067 Score=36.69 Aligned_cols=40 Identities=23% Similarity=0.640 Sum_probs=31.1
Q ss_pred ccccccc--cCCceEEeCCC-----CchhhHHhHHHHhccC--Ccccccc
Q 010851 447 SCVICWE--APVEGACVPCG-----HMAGCMSCLSEIKAKK--GDCPVCR 487 (499)
Q Consensus 447 ~C~iC~~--~~~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~Cp~Cr 487 (499)
.|-||++ ...++...||. |.+ -..|+.+|...+ ..||+|+
T Consensus 1 ~CrIC~~~~~~~~~l~~PC~C~G~~~~v-H~~Cl~~W~~~~~~~~C~iC~ 49 (49)
T smart00744 1 ICRICHDEGDEGDPLVSPCRCKGSLKYV-HQECLERWINESGNKTCEICK 49 (49)
T ss_pred CccCCCCCCCCCCeeEeccccCCchhHH-HHHHHHHHHHHcCCCcCCCCC
Confidence 3889996 55667778996 556 999999998654 4899994
No 182
>KOG1002 consensus Nucleotide excision repair protein RAD16 [Replication, recombination and repair]
Probab=93.85 E-value=0.025 Score=57.09 Aligned_cols=49 Identities=22% Similarity=0.613 Sum_probs=39.8
Q ss_pred CCCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-----CCccccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-----KGDCPVCRTKI 490 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-----~~~Cp~Cr~~i 490 (499)
+..+..+|.+|.|...+.+...|.|.| |..|+..-... ...||.|...+
T Consensus 532 enk~~~~C~lc~d~aed~i~s~ChH~F-CrlCi~eyv~~f~~~~nvtCP~C~i~L 585 (791)
T KOG1002|consen 532 ENKGEVECGLCHDPAEDYIESSCHHKF-CRLCIKEYVESFMENNNVTCPVCHIGL 585 (791)
T ss_pred cccCceeecccCChhhhhHhhhhhHHH-HHHHHHHHHHhhhcccCCCCccccccc
Confidence 345667999999999999999999999 99999664432 34799997655
No 183
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=93.80 E-value=0.069 Score=39.71 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=27.9
Q ss_pred EEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 459 ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 459 ~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
+---|.|.| -..|+.+|...+..||++|++..
T Consensus 50 ~wG~CnHaF-H~HCI~rWL~Tk~~CPld~q~w~ 81 (88)
T COG5194 50 VWGVCNHAF-HDHCIYRWLDTKGVCPLDRQTWV 81 (88)
T ss_pred EEEecchHH-HHHHHHHHHhhCCCCCCCCceeE
Confidence 334799999 99999999999999999998764
No 184
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.78 E-value=0.33 Score=44.17 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=32.0
Q ss_pred CHHHHHHHHHccc-ccccc-cccccCCCHHHHHhhhcCCHHHHHHHHhcCCCC
Q 010851 131 HINVVRAIESHIC-YFCGW-LREFYGPSFLEALAPQLMSRKIWVVVIPCGTAN 181 (499)
Q Consensus 131 ~~~~v~~Ll~~g~-~~~~~-~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~ 181 (499)
+..++++++++|. ++|.. .+-+.|.|-|. -|.+.++.+++.+||++||-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLD-NA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLD-NAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHH-hHHhcCcHHHHHHHHHcCccc
Confidence 4566777777763 55421 23456777777 677777777777777777743
No 185
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=93.51 E-value=0.048 Score=45.02 Aligned_cols=47 Identities=30% Similarity=0.648 Sum_probs=40.1
Q ss_pred cccccccccCCceEEe----CCCCchhhHHhHHHHhcc---CCccccccccccce
Q 010851 446 SSCVICWEAPVEGACV----PCGHMAGCMSCLSEIKAK---KGDCPVCRTKINQV 493 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~----pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~~~ 493 (499)
-+|.||.|...+..|+ -||-.. |..|.-.+|+. -+.||+|+..+++.
T Consensus 81 YeCnIC~etS~ee~FLKPneCCgY~i-Cn~Cya~LWK~~~~ypvCPvCkTSFKss 134 (140)
T PF05290_consen 81 YECNICKETSAEERFLKPNECCGYSI-CNACYANLWKFCNLYPVCPVCKTSFKSS 134 (140)
T ss_pred eeccCcccccchhhcCCcccccchHH-HHHHHHHHHHHcccCCCCCccccccccc
Confidence 5999999999999887 499888 99999888875 35899999988753
No 186
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.51 E-value=0.29 Score=44.58 Aligned_cols=91 Identities=9% Similarity=0.004 Sum_probs=65.3
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCC----CCCcHHHHHHHc--CCHHHHHHHHHCC-CCCccc---CCCC
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANINAYRPGG----RGGTPLHHAAKR--GLEPTVRLLLSCG-ANALVR---NDDC 119 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~----~g~TpL~~A~~~--g~~~~v~~Ll~~g-a~~~~~---d~~g 119 (499)
-.++|-+|..+ +..+++.+|+.. .++..+ |. .+.--+-++... .+..+++++|+.| +++|.. -+.|
T Consensus 179 A~~Am~~si~~-~K~dva~~lls~-f~ft~~--dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGN-AKEDVALYLLSK-FNFTKQ--DVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcc-cHHHHHHHHHhh-cceecc--hhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCc
Confidence 35788888866 777888888864 333333 22 222234444433 4567889999998 777653 4679
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 120 HTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 120 ~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
.|-|.-|...++.+++.+|+++|+-
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCcc
Confidence 9999999999999999999999984
No 187
>KOG2660 consensus Locus-specific chromosome binding proteins [Function unknown]
Probab=93.14 E-value=0.024 Score=54.23 Aligned_cols=52 Identities=23% Similarity=0.581 Sum_probs=43.4
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010851 444 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
....|.+|-.-+.+...+ -|-|.| |..|+-+-......||.|...|-+...+
T Consensus 14 ~~itC~LC~GYliDATTI~eCLHTF-CkSCivk~l~~~~~CP~C~i~ih~t~pl 66 (331)
T KOG2660|consen 14 PHITCRLCGGYLIDATTITECLHTF-CKSCIVKYLEESKYCPTCDIVIHKTHPL 66 (331)
T ss_pred cceehhhccceeecchhHHHHHHHH-HHHHHHHHHHHhccCCccceeccCcccc
Confidence 346999999999888766 699999 9999988777678999999988776644
No 188
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=92.61 E-value=0.061 Score=58.06 Aligned_cols=48 Identities=27% Similarity=0.719 Sum_probs=37.1
Q ss_pred CCcccccccccc-------CCceEEeCCCCchhhHHhHHHHhccC--Ccccccccccc
Q 010851 443 GSSSSCVICWEA-------PVEGACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~-------~~~~~~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 491 (499)
.+..+|.||+.. ...-.+-.|.|.| ...|.-+|-+.+ ..||+||..|.
T Consensus 1467 sG~eECaICYsvL~~vdr~lPskrC~TCknKF-H~~CLyKWf~Ss~~s~CPlCRseit 1523 (1525)
T COG5219 1467 SGHEECAICYSVLDMVDRSLPSKRCATCKNKF-HTRCLYKWFASSARSNCPLCRSEIT 1523 (1525)
T ss_pred CCcchhhHHHHHHHHHhccCCccccchhhhhh-hHHHHHHHHHhcCCCCCCccccccc
Confidence 445799999953 3344455799999 999999998764 47999998764
No 189
>KOG1814 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.56 E-value=0.073 Score=52.41 Aligned_cols=30 Identities=37% Similarity=0.917 Sum_probs=25.4
Q ss_pred cccccccccCCc---eEEeCCCCchhhHHhHHHH
Q 010851 446 SSCVICWEAPVE---GACVPCGHMAGCMSCLSEI 476 (499)
Q Consensus 446 ~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~ 476 (499)
-.|+||++...- .+++||+|.| |..|...-
T Consensus 185 f~C~ICf~e~~G~~c~~~lpC~Hv~-Ck~C~kdY 217 (445)
T KOG1814|consen 185 FDCCICFEEQMGQHCFKFLPCSHVF-CKSCLKDY 217 (445)
T ss_pred ccceeeehhhcCcceeeecccchHH-HHHHHHHH
Confidence 589999998754 5788999999 99998663
No 190
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=92.33 E-value=0.11 Score=36.88 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=28.4
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhcc--CCcccc
Q 010851 446 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK--KGDCPV 485 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~--~~~Cp~ 485 (499)
..|+|.+..+.+++.- .|||.| ..+.+..+... ...||+
T Consensus 12 ~~CPiT~~~~~~PV~s~~C~H~f-ek~aI~~~i~~~~~~~CPv 53 (57)
T PF11789_consen 12 LKCPITLQPFEDPVKSKKCGHTF-EKEAILQYIQRNGSKRCPV 53 (57)
T ss_dssp SB-TTTSSB-SSEEEESSS--EE-EHHHHHHHCTTTS-EE-SC
T ss_pred cCCCCcCChhhCCcCcCCCCCee-cHHHHHHHHHhcCCCCCCC
Confidence 6999999999999875 899999 99999998733 347998
No 191
>COG5220 TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Probab=92.04 E-value=0.077 Score=48.17 Aligned_cols=44 Identities=27% Similarity=0.684 Sum_probs=33.1
Q ss_pred cccccccccc---CCceEEe--C-CCCchhhHHhHHHHhccC-Cccc--ccccc
Q 010851 445 SSSCVICWEA---PVEGACV--P-CGHMAGCMSCLSEIKAKK-GDCP--VCRTK 489 (499)
Q Consensus 445 ~~~C~iC~~~---~~~~~~~--p-CgH~~~C~~C~~~~~~~~-~~Cp--~Cr~~ 489 (499)
...|+||..- ..++.++ | |-|.+ |..|..++-... ..|| -|..-
T Consensus 10 d~~CPvCksDrYLnPdik~linPECyHrm-CESCvdRIFs~GpAqCP~~gC~kI 62 (314)
T COG5220 10 DRRCPVCKSDRYLNPDIKILINPECYHRM-CESCVDRIFSRGPAQCPYKGCGKI 62 (314)
T ss_pred cccCCccccccccCCCeEEEECHHHHHHH-HHHHHHHHhcCCCCCCCCccHHHH
Confidence 3699999853 2455554 6 99999 999999988764 4899 77553
No 192
>PF03854 zf-P11: P-11 zinc finger; InterPro: IPR003224 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The RING-finger is a specialised type of Zn-finger of 40 to 60 residues that binds two atoms of zinc, and is probably involved in mediating protein-protein interactions [, , ]. There are two different variants, the C3HC4-type and a C3H2C3-type, which is clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain which has been implicated in a range of diverse biological processes. Several 3D-structures for RING-fingers are known [, ]. The 3D structure of the zinc ligation system is unique to the RING domain and is referred to as the 'cross-brace' motif. The spacing of the cysteines in such a domain is: C-x(2)-C-x(9 to 39)-C-x(1 to 3)-H-x(2 to 3)-C-x(2)-C-x(4 to 48)-C-x(2)-C Metal ligand pairs one and three co-ordinate to bind one zinc ion, whilst pairs two and four bind the second. This entry represents RING finger protein Z, a small polypeptide found in some negative-strand RNA viruses including Lassa fever virus, which plays a crucial role in virion assembly and budding. RING finger Z has been shown to interact with several host proteins, including promyelocytic leukemia protein and the eukaryotic translation initiation factor 4E [, ]. It is sufficient in the absence of any other viral proteins to release virus-like particles from the infected cell []. This protein is also responsible for arenavirus superinfection exclusion; expression of this protein in a host cell strongly and specifically inhibits areanavirus transcription and replication []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003723 RNA binding, 0008270 zinc ion binding; PDB: 2KO5_A.
Probab=92.01 E-value=0.11 Score=34.49 Aligned_cols=46 Identities=30% Similarity=0.861 Sum_probs=26.0
Q ss_pred ccccccccCCceEEeCCC-CchhhHHhHHHHhccCCccccccccccceeE
Q 010851 447 SCVICWEAPVEGACVPCG-HMAGCMSCLSEIKAKKGDCPVCRTKINQVIR 495 (499)
Q Consensus 447 ~C~iC~~~~~~~~~~pCg-H~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~ 495 (499)
-|.-|+-..... +.|. |.. |..|...|...+..||+|..++...++
T Consensus 4 nCKsCWf~~k~L--i~C~dHYL-Cl~CLt~ml~~s~~C~iC~~~LPtkir 50 (50)
T PF03854_consen 4 NCKSCWFANKGL--IKCSDHYL-CLNCLTLMLSRSDRCPICGKPLPTKIR 50 (50)
T ss_dssp ---SS-S--SSE--EE-SS-EE-EHHHHHHT-SSSSEETTTTEE----S-
T ss_pred cChhhhhcCCCe--eeecchhH-HHHHHHHHhccccCCCcccCcCccccC
Confidence 566676655554 4587 665 999999999888899999998876553
No 193
>PF05883 Baculo_RING: Baculovirus U-box/Ring-like domain; InterPro: IPR008573 This family consists of several Baculovirus proteins of around 130 residues in length. The function of this family is unknown, but it appears to be related to the U-box and ring finger domain by profile-profile comparison.
Probab=91.31 E-value=0.16 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=26.8
Q ss_pred cccccccccCCc---eEEeCCC------CchhhHHhHHHHhc
Q 010851 446 SSCVICWEAPVE---GACVPCG------HMAGCMSCLSEIKA 478 (499)
Q Consensus 446 ~~C~iC~~~~~~---~~~~pCg------H~~~C~~C~~~~~~ 478 (499)
.+|.||+++.-+ +|.++|| |+| |..|..+|.+
T Consensus 27 ~EC~IC~~~I~~~~GvV~vt~~g~lnLEkmf-c~~C~~rw~~ 67 (134)
T PF05883_consen 27 VECQICFDRIDNNDGVVYVTDGGTLNLEKMF-CADCDKRWRR 67 (134)
T ss_pred eeehhhhhhhhcCCCEEEEecCCeehHHHHH-HHHHHHHHHh
Confidence 699999998765 5677898 677 9999999954
No 194
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=90.83 E-value=0.056 Score=50.98 Aligned_cols=31 Identities=26% Similarity=0.878 Sum_probs=24.4
Q ss_pred EEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 459 ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 459 ~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..+||.|.| |.+|+..-. .+.||.|-..|.+
T Consensus 105 RmIPCkHvF-Cl~CAr~~~--dK~Cp~C~d~Vqr 135 (389)
T KOG2932|consen 105 RMIPCKHVF-CLECARSDS--DKICPLCDDRVQR 135 (389)
T ss_pred cccccchhh-hhhhhhcCc--cccCcCcccHHHH
Confidence 467999999 999987644 3569999877654
No 195
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=89.96 E-value=0.079 Score=39.45 Aligned_cols=45 Identities=33% Similarity=0.822 Sum_probs=21.5
Q ss_pred cccccccccCC------ceEEe--CCCCchhhHHhHHHHhcc----C-------Ccccccccccc
Q 010851 446 SSCVICWEAPV------EGACV--PCGHMAGCMSCLSEIKAK----K-------GDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~------~~~~~--pCgH~~~C~~C~~~~~~~----~-------~~Cp~Cr~~i~ 491 (499)
..|.||++..- +.+.- .|++.| -..|+..|-.. + +.||.|+.+|.
T Consensus 3 ~~C~IC~~~~~~~~~~p~~~C~n~~C~~~f-H~~CL~~wf~~~~~~~~~~~~~~G~CP~C~~~i~ 66 (70)
T PF11793_consen 3 LECGICYSYRLDDGEIPDVVCPNPSCGKKF-HLLCLSEWFLSLEKSRQSFIPIFGECPYCSSPIS 66 (70)
T ss_dssp -S-SSS--SS-TT-----B--S-TT----B--SGGGHHHHHHHHSSS-TTT--EEE-TTT-SEEE
T ss_pred CCCCcCCcEecCCCCcCceEcCCcccCCHH-HHHHHHHHHHHcccCCeeecccccCCcCCCCeee
Confidence 58999997643 22332 688888 88998887642 1 35999999885
No 196
>KOG0826 consensus Predicted E3 ubiquitin ligase involved in peroxisome organization [Posttranslational modification, protein turnover, chaperones]
Probab=89.48 E-value=0.15 Score=48.73 Aligned_cols=53 Identities=23% Similarity=0.584 Sum_probs=40.0
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccc--cceeEee
Q 010851 444 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKI--NQVIRLY 497 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i--~~~~~~~ 497 (499)
+...|+||+....++..+ -.|-+| |+.|+-.-...-+.||+-..+. +..+|+|
T Consensus 299 ~~~~CpvClk~r~Nptvl~vSGyVf-CY~Ci~~Yv~~~~~CPVT~~p~~v~~l~rl~ 354 (357)
T KOG0826|consen 299 DREVCPVCLKKRQNPTVLEVSGYVF-CYPCIFSYVVNYGHCPVTGYPASVDHLIRLF 354 (357)
T ss_pred ccccChhHHhccCCCceEEecceEE-eHHHHHHHHHhcCCCCccCCcchHHHHHHHh
Confidence 446999999988777544 568998 9999988666667899865554 4666665
No 197
>KOG1493 consensus Anaphase-promoting complex (APC), subunit 11 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=89.43 E-value=0.13 Score=37.99 Aligned_cols=29 Identities=28% Similarity=0.678 Sum_probs=23.9
Q ss_pred CCCCchhhHHhHHHHhcc---CCcccccccccc
Q 010851 462 PCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN 491 (499)
Q Consensus 462 pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~ 491 (499)
-|.|.| -..|+.++... ...||+||+...
T Consensus 50 ~C~h~f-h~hCI~~wl~~~tsq~~CPmcRq~~~ 81 (84)
T KOG1493|consen 50 YCLHAF-HAHCILKWLNTPTSQGQCPMCRQTWQ 81 (84)
T ss_pred HHHHHH-HHHHHHHHhcCccccccCCcchheeE
Confidence 699999 99999998764 357999998653
No 198
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=88.79 E-value=2.1 Score=37.92 Aligned_cols=113 Identities=19% Similarity=0.123 Sum_probs=74.5
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHH----HHHHHcCCCCCccCCCCCCCcHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVA----KTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v----~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
..++.+-.|++..+.++|+++-+ ++.. .+-.+-+-+|..+ ...++. +++..+..+-...|++.--.--|.
T Consensus 75 ~~q~LFElAC~~qkydiV~WI~q---nL~i--~~~~~iFdIA~~~-kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~ 148 (192)
T PF03158_consen 75 LNQELFELACEEQKYDIVKWIGQ---NLHI--YNPEDIFDIAFAK-KDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLE 148 (192)
T ss_pred HHHHHHHHHHHHccccHHHHHhh---ccCC--CCchhhhhhhhhc-cchhHHHHHHHHHHhhcccccccCHHHHHHHHHH
Confidence 46788899999999999999833 2222 2223455667665 555542 222333211111100111113467
Q ss_pred HHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 010851 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (499)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 140 (499)
.|+..|-...|.-.|++|.+++. +.|..|+..++-.|+.+++.
T Consensus 149 ~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 149 KAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 89999999999999999987753 79999999999999998875
No 199
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=88.57 E-value=0.48 Score=44.98 Aligned_cols=53 Identities=9% Similarity=-0.103 Sum_probs=42.3
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
.....+|.+|-+.....+..||+|+..|.+|+.. .....||.|..-+-..++|
T Consensus 340 ~~s~~~~~~~~~~~~st~~~~~~~n~~~~~~a~~--s~~~~~~~c~~~~~~~~~i 392 (394)
T KOG2113|consen 340 LMSSLKGTSAGFGLLSTIWSGGNMNLSPGSLASA--SASPTSSTCDHNDHTLVPI 392 (394)
T ss_pred chhhcccccccCceeeeEeecCCcccChhhhhhc--ccCCccccccccceeeeec
Confidence 3455799999999999999999999999999883 2345799997755555554
No 200
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=86.95 E-value=1.5 Score=33.13 Aligned_cols=48 Identities=21% Similarity=0.142 Sum_probs=32.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL 73 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ 73 (499)
..-|..|+..|+.|+++.+++.+ .++ ...|..|+.. .+-++++.|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~-H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKS-HNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHH-hhHHHHHHHHHh
Confidence 34567777777888777777654 211 3457777776 667777777765
No 201
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=86.42 E-value=0.42 Score=54.19 Aligned_cols=48 Identities=25% Similarity=0.772 Sum_probs=36.8
Q ss_pred CccccccccccC---CceEEeCCCCchhhHHhHHHHhccCC----------ccccccccccc
Q 010851 444 SSSSCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKG----------DCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~----------~Cp~Cr~~i~~ 492 (499)
....|.||+... .-.+.+.|+|+| -..|..++...++ .||+|..+|..
T Consensus 3485 ~DDmCmICFTE~L~AAP~IqL~C~HiF-HlqC~R~vLE~RW~GPRItF~FisCPiC~n~InH 3545 (3738)
T KOG1428|consen 3485 ADDMCMICFTEALSAAPAIQLDCSHIF-HLQCCRRVLENRWLGPRITFGFISCPICKNKINH 3545 (3738)
T ss_pred cCceEEEEehhhhCCCcceecCCccch-hHHHHHHHHHhcccCCeeEEeeeecccccchhhh
Confidence 346999999654 334667999999 9999888765432 59999998874
No 202
>COG5222 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=85.93 E-value=0.42 Score=44.95 Aligned_cols=42 Identities=24% Similarity=0.589 Sum_probs=34.2
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHH-HhccCCccccccc
Q 010851 446 SSCVICWEAPVEGACV-PCGHMAGCMSCLSE-IKAKKGDCPVCRT 488 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~-~~~~~~~Cp~Cr~ 488 (499)
..|+.|......++-. -|+|.| |.+|+.. +......||.|..
T Consensus 275 LkCplc~~Llrnp~kT~cC~~~f-c~eci~~al~dsDf~CpnC~r 318 (427)
T COG5222 275 LKCPLCHCLLRNPMKTPCCGHTF-CDECIGTALLDSDFKCPNCSR 318 (427)
T ss_pred ccCcchhhhhhCcccCccccchH-HHHHHhhhhhhccccCCCccc
Confidence 6899999988888777 588999 9999975 4444568999976
No 203
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=85.92 E-value=0.23 Score=48.90 Aligned_cols=53 Identities=28% Similarity=0.627 Sum_probs=0.0
Q ss_pred cccccccccc-------------------CCceEEeCCCCchhhHHhHHHHhcc---------CCccccccccccc---e
Q 010851 445 SSSCVICWEA-------------------PVEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKINQ---V 493 (499)
Q Consensus 445 ~~~C~iC~~~-------------------~~~~~~~pCgH~~~C~~C~~~~~~~---------~~~Cp~Cr~~i~~---~ 493 (499)
...|++|+.. +...+|.||||++ =...+.-|.+. ...||.|-.++.. +
T Consensus 328 ~r~CPlCr~~g~~V~L~mG~E~afyvD~~~pthaF~PCGHv~-SekTa~yWs~i~lPhGt~~f~a~CPFCa~~L~g~~g~ 406 (416)
T PF04710_consen 328 SRTCPLCRQVGPYVPLWMGCEPAFYVDSGPPTHAFNPCGHVC-SEKTAKYWSQIPLPHGTHAFHAACPFCATPLDGEQGY 406 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCccccCCceeEeeccccceeecCCCCceeeccccccc-chhhhhhhhcCCCCCCcccccccCCcccCcccCCCCc
Confidence 6799999852 3445678999997 56666666652 1369999999874 6
Q ss_pred eEeee
Q 010851 494 IRLYT 498 (499)
Q Consensus 494 ~~~~~ 498 (499)
+++++
T Consensus 407 vrLiF 411 (416)
T PF04710_consen 407 VRLIF 411 (416)
T ss_dssp -----
T ss_pred eEEEE
Confidence 77754
No 204
>PF10272 Tmpp129: Putative transmembrane protein precursor; InterPro: IPR018801 This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown.
Probab=83.70 E-value=1.3 Score=44.06 Aligned_cols=26 Identities=38% Similarity=0.848 Sum_probs=19.2
Q ss_pred CchhhHHhHHHHhcc-------------CCcccccccccc
Q 010851 465 HMAGCMSCLSEIKAK-------------KGDCPVCRTKIN 491 (499)
Q Consensus 465 H~~~C~~C~~~~~~~-------------~~~Cp~Cr~~i~ 491 (499)
-+. |.+|.-+|-.. +..||.||+.++
T Consensus 313 PmW-C~~Cm~kwFasrQd~~~~~~Wl~~~~~CPtCRa~FC 351 (358)
T PF10272_consen 313 PMW-CLECMGKWFASRQDQQHPETWLSGKCPCPTCRAKFC 351 (358)
T ss_pred chH-HHHHHHHHhhhcCCCCChhhhhcCCCCCCCCcccce
Confidence 344 99999887642 236999999875
No 205
>KOG2817 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=83.51 E-value=0.74 Score=45.50 Aligned_cols=40 Identities=23% Similarity=0.486 Sum_probs=30.9
Q ss_pred eEEeCCCCchhhHHhHHHHhccC---Ccccccccccc--ceeEeee
Q 010851 458 GACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKIN--QVIRLYT 498 (499)
Q Consensus 458 ~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i~--~~~~~~~ 498 (499)
+.-+.|||+. |.+-+.++.+.. -+||+|-.... +..+||+
T Consensus 350 Pm~L~CGHVI-SkdAlnrLS~ng~~sfKCPYCP~e~~~~~~kql~F 394 (394)
T KOG2817|consen 350 PMMLICGHVI-SKDALNRLSKNGSQSFKCPYCPVEQLASDTKQLYF 394 (394)
T ss_pred Ceeeecccee-cHHHHHHHhhCCCeeeeCCCCCcccCHHhcccccC
Confidence 5667899999 999999998763 48999976553 5666653
No 206
>KOG2930 consensus SCF ubiquitin ligase, Rbx1 component [Posttranslational modification, protein turnover, chaperones]
Probab=83.26 E-value=0.87 Score=35.84 Aligned_cols=30 Identities=23% Similarity=0.484 Sum_probs=26.1
Q ss_pred EEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010851 459 ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 459 ~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
+---|.|.| -..|+.+|.+++..||+|.+.
T Consensus 77 aWG~CNHaF-H~hCisrWlktr~vCPLdn~e 106 (114)
T KOG2930|consen 77 AWGVCNHAF-HFHCISRWLKTRNVCPLDNKE 106 (114)
T ss_pred EeeecchHH-HHHHHHHHHhhcCcCCCcCcc
Confidence 334799999 999999999999999999764
No 207
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=83.20 E-value=0.46 Score=38.55 Aligned_cols=30 Identities=30% Similarity=0.780 Sum_probs=23.7
Q ss_pred CccccccccccCCceEE--eCCCCchhhHHhHH
Q 010851 444 SSSSCVICWEAPVEGAC--VPCGHMAGCMSCLS 474 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~--~pCgH~~~C~~C~~ 474 (499)
....|.+|.......+| .||||.+ ...|..
T Consensus 77 ~~~~C~vC~k~l~~~~f~~~p~~~v~-H~~C~~ 108 (109)
T PF10367_consen 77 ESTKCSVCGKPLGNSVFVVFPCGHVV-HYSCIK 108 (109)
T ss_pred CCCCccCcCCcCCCceEEEeCCCeEE-eccccc
Confidence 34689999998865544 4999999 998865
No 208
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=82.65 E-value=2 Score=32.49 Aligned_cols=46 Identities=13% Similarity=0.072 Sum_probs=27.3
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
-|..|+..|+.|+++.+++.+ .+ + ...|..|+...+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~---~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KP---D---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-cc---H---HHHHHHHHHHhhHHHHHHHHHh
Confidence 456666666666666666543 11 1 3356666666666666666654
No 209
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=80.43 E-value=2 Score=40.98 Aligned_cols=52 Identities=25% Similarity=0.562 Sum_probs=32.6
Q ss_pred CccccccccccC-------------------CceEEeCCCCchhhHHhHHHHhcc---------CCcccccccccc---c
Q 010851 444 SSSSCVICWEAP-------------------VEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKIN---Q 492 (499)
Q Consensus 444 ~~~~C~iC~~~~-------------------~~~~~~pCgH~~~C~~C~~~~~~~---------~~~Cp~Cr~~i~---~ 492 (499)
.+++|++|+..- .+-.|-||||++ -..=..-|.+. ...||.|-..+. .
T Consensus 340 ~~r~CPmC~~~gp~V~L~lG~E~~f~vD~G~pthaF~PCGHv~-sekt~~YWs~iplPhGT~~f~a~CPFC~~~L~ge~~ 418 (429)
T KOG3842|consen 340 RERECPMCRVVGPYVPLWLGCEAGFYVDAGPPTHAFNPCGHVC-SEKTVKYWSQIPLPHGTHAFHAACPFCATQLAGEQG 418 (429)
T ss_pred ccCcCCeeeeecceeeeeccccceeEecCCCcccccCCccccc-chhhhhHhhcCcCCCccccccccCcchhhhhccCCc
Confidence 467999998642 333567999995 33333444432 135999988775 3
Q ss_pred eeEe
Q 010851 493 VIRL 496 (499)
Q Consensus 493 ~~~~ 496 (499)
+|++
T Consensus 419 ~ikl 422 (429)
T KOG3842|consen 419 YIKL 422 (429)
T ss_pred eEEE
Confidence 5554
No 210
>PHA03096 p28-like protein; Provisional
Probab=80.09 E-value=1.1 Score=43.08 Aligned_cols=44 Identities=20% Similarity=0.236 Sum_probs=30.8
Q ss_pred cccccccccCCc--------eEEeCCCCchhhHHhHHHHhccC------Cccccccccc
Q 010851 446 SSCVICWEAPVE--------GACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKI 490 (499)
Q Consensus 446 ~~C~iC~~~~~~--------~~~~pCgH~~~C~~C~~~~~~~~------~~Cp~Cr~~i 490 (499)
..|.||++.... ..+-.|.|.| |..|+..|...+ +.||.|+..+
T Consensus 179 k~c~ic~e~~~~k~~~~~~fgil~~c~h~f-c~~ci~~wr~~~~~~e~~~~c~~~~~~~ 236 (284)
T PHA03096 179 KICGICLENIKAKYIIKKYYGILSEIKHEF-NIFCIKIWMTESLYKETEPENRRLNTVI 236 (284)
T ss_pred hhcccchhhhhhhccccccccccccCCcHH-HHHHHHHHHHhhhhcccCccccchhhHH
Confidence 489999986532 2345899999 999999888642 2455555433
No 211
>KOG3161 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.49 E-value=0.8 Score=47.80 Aligned_cols=36 Identities=31% Similarity=0.754 Sum_probs=29.0
Q ss_pred cccccccccC----CceEEeCCCCchhhHHhHHHHhccCCccc
Q 010851 446 SSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCP 484 (499)
Q Consensus 446 ~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp 484 (499)
..|.||+..+ ..++++-|||.. |..|++.+.+. .||
T Consensus 12 l~c~ic~n~f~~~~~~Pvsl~cghti-c~~c~~~lyn~--scp 51 (861)
T KOG3161|consen 12 LLCDICLNLFVVQRLEPVSLQCGHTI-CGHCVQLLYNA--SCP 51 (861)
T ss_pred hhchHHHHHHHHHhcCcccccccchH-HHHHHHhHhhc--cCC
Confidence 4899997654 456788999999 99999998864 477
No 212
>PHA02862 5L protein; Provisional
Probab=78.66 E-value=1.9 Score=36.32 Aligned_cols=45 Identities=29% Similarity=0.521 Sum_probs=34.6
Q ss_pred cccccccccCCceEEeCCCC----chhhHHhHHHHhcc--CCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGH----MAGCMSCLSEIKAK--KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH----~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 491 (499)
..|=||++...+. ..||.. .+...+|..+|... +..|++|+.+..
T Consensus 3 diCWIC~~~~~e~-~~PC~C~GS~K~VHq~CL~~WIn~S~k~~CeLCkteY~ 53 (156)
T PHA02862 3 DICWICNDVCDER-NNFCGCNEEYKVVHIKCMQLWINYSKKKECNLCKTKYN 53 (156)
T ss_pred CEEEEecCcCCCC-cccccccCcchhHHHHHHHHHHhcCCCcCccCCCCeEE
Confidence 5899999987554 468884 33478999999875 348999998764
No 213
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=77.29 E-value=0.61 Score=44.34 Aligned_cols=53 Identities=13% Similarity=0.260 Sum_probs=42.9
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccC-CccccccccccceeEe
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQVIRL 496 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~~~~~ 496 (499)
....|.+|++.......++|+|.++|..|....+.++ +.|++|...+.....|
T Consensus 135 ~ti~~iqq~tnt~I~T~v~~~~~Vf~Vtg~~~nC~kra~s~eie~ta~~ra~~i 188 (394)
T KOG2113|consen 135 ATIKRIQQFTNTYIATPVRCGEPVFCVTGAPKNCVKRARSCEIEQTAVTRAGQI 188 (394)
T ss_pred CccchheecccceEeeeccCCCceEEEecCCcchhhhccccchhhhhhhhhhcc
Confidence 3468999999999999999999999999988876554 4699997766655544
No 214
>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]
Probab=74.73 E-value=0.88 Score=48.53 Aligned_cols=46 Identities=26% Similarity=0.624 Sum_probs=38.3
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhcc---CCcccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~ 491 (499)
..+|.||.....+++.+.|.|.| |..|....... ...||+|+..+.
T Consensus 21 ~lEc~ic~~~~~~p~~~kc~~~~-l~~~~n~~f~~~~~~~~~~lc~~~~e 69 (684)
T KOG4362|consen 21 ILECPICLEHVKEPSLLKCDHIF-LKFCLNKLFESKKGPKQCALCKSDIE 69 (684)
T ss_pred hccCCceeEEeeccchhhhhHHH-HhhhhhceeeccCccccchhhhhhhh
Confidence 36999999999999999999999 99998775543 347999997664
No 215
>PHA02825 LAP/PHD finger-like protein; Provisional
Probab=74.60 E-value=3.4 Score=35.67 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=34.5
Q ss_pred ccccccccccCCceEEeCCCCc----hhhHHhHHHHhccC--Ccccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHM----AGCMSCLSEIKAKK--GDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~----~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 491 (499)
+..|=||.+.... ...||... +.-.+|.++|...+ ..|++|+.++.
T Consensus 8 ~~~CRIC~~~~~~-~~~PC~CkGs~k~VH~sCL~rWi~~s~~~~CeiC~~~Y~ 59 (162)
T PHA02825 8 DKCCWICKDEYDV-VTNYCNCKNENKIVHKECLEEWINTSKNKSCKICNGPYN 59 (162)
T ss_pred CCeeEecCCCCCC-ccCCcccCCCchHHHHHHHHHHHhcCCCCcccccCCeEE
Confidence 4699999998754 34588742 34789999998764 48999998774
No 216
>KOG4445 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=72.68 E-value=1.8 Score=41.06 Aligned_cols=45 Identities=31% Similarity=0.772 Sum_probs=31.8
Q ss_pred cccccccccCCce---EEeCCCCchhhHHhHHHHhc------------------c-----CCcccccccccc
Q 010851 446 SSCVICWEAPVEG---ACVPCGHMAGCMSCLSEIKA------------------K-----KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~~~------------------~-----~~~Cp~Cr~~i~ 491 (499)
..|+||+--+.+. ...+|.|.+ -+.|..+-.. . +..||+||..|.
T Consensus 116 gqCvICLygfa~~~~ft~T~C~Hy~-H~~ClaRyl~~~~~~lrqe~q~~~~~~qh~~~~~eavcpVcre~i~ 186 (368)
T KOG4445|consen 116 GQCVICLYGFASSPAFTVTACDHYM-HFACLARYLTECLTGLRQEIQDAQKERQHMKEQVEAVCPVCRERIK 186 (368)
T ss_pred CceEEEEEeecCCCceeeehhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhHhhhhcc
Confidence 5899988766544 345999999 8888654321 0 125999999986
No 217
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures]
Probab=69.31 E-value=2 Score=42.23 Aligned_cols=46 Identities=30% Similarity=0.678 Sum_probs=34.5
Q ss_pred Ccccccccccc----CCceEEeCCCCchhhHHhHHHHhcc--CCccccccccc
Q 010851 444 SSSSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKI 490 (499)
Q Consensus 444 ~~~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i 490 (499)
.+.-|..|-+. ....-.+||.|.| -..|...+..+ .+.||-||+-+
T Consensus 364 ~~L~Cg~CGe~~Glk~e~LqALpCsHIf-H~rCl~e~L~~n~~rsCP~Crklr 415 (518)
T KOG1941|consen 364 TELYCGLCGESIGLKNERLQALPCSHIF-HLRCLQEILENNGTRSCPNCRKLR 415 (518)
T ss_pred HhhhhhhhhhhhcCCcccccccchhHHH-HHHHHHHHHHhCCCCCCccHHHHH
Confidence 33589999874 3445567999999 99999876644 45899999533
No 218
>PF02891 zf-MIZ: MIZ/SP-RING zinc finger; InterPro: IPR004181 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MIZ-type zinc finger domains. Miz1 (Msx-interacting-zinc finger) is a zinc finger-containing protein with homology to the yeast protein, Nfi-1. Miz1 is a sequence specific DNA binding protein that can function as a positive-acting transcription factor. Miz1 binds to the homeobox protein Msx2, enhancing the specific DNA-binding ability of Msx2 []. Other proteins containing this domain include the human pias family (protein inhibitor of activated STAT protein). More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3I2D_A.
Probab=68.80 E-value=3.1 Score=28.61 Aligned_cols=43 Identities=21% Similarity=0.498 Sum_probs=20.8
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhc----cCCcccccccc
Q 010851 446 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKA----KKGDCPVCRTK 489 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~----~~~~Cp~Cr~~ 489 (499)
..|++...+...++-. .|.|.- |++=..-+.. ..+.||+|.++
T Consensus 3 L~CPls~~~i~~P~Rg~~C~H~~-CFDl~~fl~~~~~~~~W~CPiC~~~ 50 (50)
T PF02891_consen 3 LRCPLSFQRIRIPVRGKNCKHLQ-CFDLESFLESNQRTPKWKCPICNKP 50 (50)
T ss_dssp SB-TTTSSB-SSEEEETT--SS---EEHHHHHHHHHHS---B-TTT---
T ss_pred eeCCCCCCEEEeCccCCcCcccc-eECHHHHHHHhhccCCeECcCCcCc
Confidence 4788988888877654 899998 7655333332 24589999864
No 219
>KOG4185 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=67.04 E-value=3.4 Score=40.40 Aligned_cols=32 Identities=31% Similarity=0.810 Sum_probs=25.8
Q ss_pred eEEeCCCCchhhHHhHHHHhcc-CCccccccccc
Q 010851 458 GACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKI 490 (499)
Q Consensus 458 ~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i 490 (499)
+..+.|||.+ |..|+..+... ...||.||.+.
T Consensus 22 p~~l~c~h~~-c~~c~~~l~~~~~i~cpfcR~~~ 54 (296)
T KOG4185|consen 22 PRVLKCGHTI-CQNCASKLLGNSRILCPFCRETT 54 (296)
T ss_pred CcccccCcee-hHhHHHHHhcCceeeccCCCCcc
Confidence 3345699999 99999998875 34799999984
No 220
>KOG1952 consensus Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains [Transcription]
Probab=66.45 E-value=39 Score=37.19 Aligned_cols=47 Identities=26% Similarity=0.619 Sum_probs=35.0
Q ss_pred CCccccccccccCCceE----EeCCCCchhhHHhHHHHhcc-------CCccccccccc
Q 010851 443 GSSSSCVICWEAPVEGA----CVPCGHMAGCMSCLSEIKAK-------KGDCPVCRTKI 490 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~----~~pCgH~~~C~~C~~~~~~~-------~~~Cp~Cr~~i 490 (499)
.+..+|.||+++..... .-.|-|+| -..|+.+|-+. .++||.|+..-
T Consensus 189 ~~~yeCmIC~e~I~~t~~~WSC~sCYhVF-Hl~CI~~WArs~ek~~~~~WrCP~Cqsv~ 246 (950)
T KOG1952|consen 189 NRKYECMICTERIKRTAPVWSCKSCYHVF-HLNCIKKWARSSEKTGQDGWRCPACQSVS 246 (950)
T ss_pred cCceEEEEeeeeccccCCceecchhhhhh-hHHHHHHHHHHhhhccCccccCCcccchh
Confidence 45579999999764332 23688999 99999999763 35899997533
No 221
>PF04216 FdhE: Protein involved in formate dehydrogenase formation; InterPro: IPR006452 This family of sequences describe an accessory protein required for the assembly of formate dehydrogenase of certain proteobacteria although not present in the final complex []. The exact nature of the function of FdhE in the assembly of the complex is unknown, but considering the presence of selenocysteine, molybdopterin, iron-sulphur clusters and cytochrome b556, it is likely to be involved in the insertion of cofactors. ; GO: 0005737 cytoplasm; PDB: 2FIY_B.
Probab=65.80 E-value=1.5 Score=42.68 Aligned_cols=51 Identities=22% Similarity=0.510 Sum_probs=25.8
Q ss_pred cccccccccCCceEEeCC---C--CchhhHHhHHHHhccCCccccccccccceeEee
Q 010851 446 SSCVICWEAPVEGACVPC---G--HMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pC---g--H~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~ 497 (499)
..|+||=..+.-.++..= | |.+ |..|...|...+..||.|...-...+..|
T Consensus 173 g~CPvCGs~P~~s~l~~~~~~G~R~L~-Cs~C~t~W~~~R~~Cp~Cg~~~~~~l~~~ 228 (290)
T PF04216_consen 173 GYCPVCGSPPVLSVLRGGEREGKRYLH-CSLCGTEWRFVRIKCPYCGNTDHEKLEYF 228 (290)
T ss_dssp SS-TTT---EEEEEEE------EEEEE-ETTT--EEE--TTS-TTT---SS-EEE--
T ss_pred CcCCCCCCcCceEEEecCCCCccEEEE-cCCCCCeeeecCCCCcCCCCCCCcceeeE
Confidence 699999999887777654 4 444 99999999877778999987655544433
No 222
>KOG0298 consensus DEAD box-containing helicase-like transcription factor/DNA repair protein [Replication, recombination and repair]
Probab=64.02 E-value=1.9 Score=48.90 Aligned_cols=45 Identities=27% Similarity=0.666 Sum_probs=37.4
Q ss_pred cccccccccCC-ceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 446 SSCVICWEAPV-EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~-~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..|.||.+-.. ......|||.+ |..|...|...+..||+|...+.
T Consensus 1154 ~~c~ic~dil~~~~~I~~cgh~~-c~~c~~~~l~~~s~~~~~ksi~~ 1199 (1394)
T KOG0298|consen 1154 FVCEICLDILRNQGGIAGCGHEP-CCRCDELWLYASSRCPICKSIKG 1199 (1394)
T ss_pred cchHHHHHHHHhcCCeeeechhH-hhhHHHHHHHHhccCcchhhhhh
Confidence 48999999877 44555899999 99999999988889999975443
No 223
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=62.49 E-value=4.9 Score=39.00 Aligned_cols=46 Identities=35% Similarity=0.892 Sum_probs=35.9
Q ss_pred cccccccccC--CceEEe--CCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 446 SSCVICWEAP--VEGACV--PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 446 ~~C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..|++|.+.. .+.-++ ||++.. |.+|...+......||.||.+...
T Consensus 250 ~s~p~~~~~~~~~d~~~lP~~~~~~~-~l~~~~t~~~~~~~~~~~rk~~~~ 299 (327)
T KOG2068|consen 250 PSCPICYEDLDLTDSNFLPCPCGFRL-CLFCHKTISDGDGRCPGCRKPYER 299 (327)
T ss_pred CCCCCCCCcccccccccccccccccc-hhhhhhcccccCCCCCccCCcccc
Confidence 5899998844 333333 788886 999999998888899999987764
No 224
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=60.64 E-value=3.6 Score=40.08 Aligned_cols=44 Identities=25% Similarity=0.468 Sum_probs=32.6
Q ss_pred ccccccccccCCceEEe---CCCCchh-hHHhHHHHhccCCccccccc
Q 010851 445 SSSCVICWEAPVEGACV---PCGHMAG-CMSCLSEIKAKKGDCPVCRT 488 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~---pCgH~~~-C~~C~~~~~~~~~~Cp~Cr~ 488 (499)
...|+||=..+.-.++. .=|++++ |..|...|...+..||.|..
T Consensus 187 ~~~CPvCGs~P~~s~v~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~ 234 (309)
T PRK03564 187 RQFCPVCGSMPVSSVVQIGTTQGLRYLHCNLCESEWHVVRVKCSNCEQ 234 (309)
T ss_pred CCCCCCCCCcchhheeeccCCCCceEEEcCCCCCcccccCccCCCCCC
Confidence 36999999998655432 2343332 99999998887778999976
No 225
>KOG0827 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=60.61 E-value=6.2 Score=38.95 Aligned_cols=28 Identities=32% Similarity=0.912 Sum_probs=22.9
Q ss_pred CCCCchhhHHhHHHHhccC---Cccccccccc
Q 010851 462 PCGHMAGCMSCLSEIKAKK---GDCPVCRTKI 490 (499)
Q Consensus 462 pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i 490 (499)
-|||.| -..|...|-..- +.||+|+-.+
T Consensus 25 ~cGhif-h~~cl~qwfe~~Ps~R~cpic~ik~ 55 (465)
T KOG0827|consen 25 TCGHIF-HTTCLTQWFEGDPSNRGCPICQIKL 55 (465)
T ss_pred chhhHH-HHHHHHHHHccCCccCCCCceeecc
Confidence 499999 999999998762 4799998433
No 226
>KOG4218 consensus Nuclear hormone receptor betaFTZ-F1 [Transcription]
Probab=60.59 E-value=5.7 Score=38.46 Aligned_cols=16 Identities=13% Similarity=0.223 Sum_probs=12.2
Q ss_pred CccccccccccCCceE
Q 010851 444 SSSSCVICWEAPVEGA 459 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~ 459 (499)
....|+||-|+..-.-
T Consensus 14 l~ElCPVCGDkVSGYH 29 (475)
T KOG4218|consen 14 LGELCPVCGDKVSGYH 29 (475)
T ss_pred cccccccccCccccce
Confidence 3469999999887553
No 227
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=59.90 E-value=4.4 Score=33.55 Aligned_cols=28 Identities=32% Similarity=0.895 Sum_probs=18.3
Q ss_pred CCcccccccccc-CCceEEeCCCCchhhHHhHHHH
Q 010851 443 GSSSSCVICWEA-PVEGACVPCGHMAGCMSCLSEI 476 (499)
Q Consensus 443 ~~~~~C~iC~~~-~~~~~~~pCgH~~~C~~C~~~~ 476 (499)
++...|.||... +.| .|||+ |.+|-.+.
T Consensus 63 ~ddatC~IC~KTKFAD----G~GH~--C~YCq~r~ 91 (169)
T KOG3799|consen 63 GDDATCGICHKTKFAD----GCGHN--CSYCQTRF 91 (169)
T ss_pred CcCcchhhhhhccccc----ccCcc--cchhhhhH
Confidence 444699999964 444 48888 55554443
No 228
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=59.71 E-value=2.9 Score=45.44 Aligned_cols=44 Identities=30% Similarity=0.591 Sum_probs=33.0
Q ss_pred cccccccccCCce-EEeCCCCchhhHHhHHHHhccCCccccccccccce
Q 010851 446 SSCVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 493 (499)
Q Consensus 446 ~~C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 493 (499)
..|..|--..--+ |...|||.+ ...|.. .....||.|+.....+
T Consensus 841 skCs~C~~~LdlP~VhF~CgHsy-HqhC~e---~~~~~CP~C~~e~~~~ 885 (933)
T KOG2114|consen 841 SKCSACEGTLDLPFVHFLCGHSY-HQHCLE---DKEDKCPKCLPELRGV 885 (933)
T ss_pred eeecccCCccccceeeeecccHH-HHHhhc---cCcccCCccchhhhhh
Confidence 5899998776554 555899999 999988 3344799998855443
No 229
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=58.71 E-value=3.2 Score=40.46 Aligned_cols=45 Identities=22% Similarity=0.449 Sum_probs=33.2
Q ss_pred ccccccccccCCceEEeC----CCCchh-hHHhHHHHhccCCcccccccc
Q 010851 445 SSSCVICWEAPVEGACVP----CGHMAG-CMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~p----CgH~~~-C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
...|+||-..+.-.++.. =|++++ |..|...|...+.+||.|...
T Consensus 184 ~~~CPvCGs~P~~s~~~~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~~ 233 (305)
T TIGR01562 184 RTLCPACGSPPVASMVRQGGKETGLRYLSCSLCATEWHYVRVKCSHCEES 233 (305)
T ss_pred CCcCCCCCChhhhhhhcccCCCCCceEEEcCCCCCcccccCccCCCCCCC
Confidence 369999999986544332 343332 999999998877889999774
No 230
>KOG4217 consensus Nuclear receptors of the nerve growth factor-induced protein B type [Transcription]
Probab=58.03 E-value=1.1e+02 Score=31.37 Aligned_cols=31 Identities=23% Similarity=0.604 Sum_probs=21.3
Q ss_pred CCCccccccccccCCceEEeCCCCch--hhHHhHHHHhc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMA--GCMSCLSEIKA 478 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~--~C~~C~~~~~~ 478 (499)
...+..|.||-|+.. |.|.- +|..|.--.++
T Consensus 266 ~~~e~~CAVCgDnAa------CqHYGvRTCEGCKGFFKR 298 (605)
T KOG4217|consen 266 LSAEGLCAVCGDNAA------CQHYGVRTCEGCKGFFKR 298 (605)
T ss_pred CCccceeeecCChHH------hhhcCccccccchHHHHH
Confidence 344689999999875 66654 38888654443
No 231
>KOG1940 consensus Zn-finger protein [General function prediction only]
Probab=56.40 E-value=3.7 Score=39.16 Aligned_cols=47 Identities=26% Similarity=0.618 Sum_probs=36.0
Q ss_pred ccccccccc----CCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010851 446 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 494 (499)
..|+||.+. ...+..++|||.. -..|........=.||+|.. +....
T Consensus 159 ~ncPic~e~l~~s~~~~~~~~CgH~~-h~~cf~e~~~~~y~CP~C~~-~~d~~ 209 (276)
T KOG1940|consen 159 FNCPICKEYLFLSFEDAGVLKCGHYM-HSRCFEEMICEGYTCPICSK-PGDMS 209 (276)
T ss_pred CCCchhHHHhccccccCCccCcccch-HHHHHHHHhccCCCCCcccc-hHHHH
Confidence 359999974 4666778999999 68898887765567999988 55443
No 232
>KOG3899 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.63 E-value=7.7 Score=36.74 Aligned_cols=28 Identities=36% Similarity=0.888 Sum_probs=21.3
Q ss_pred CCCchhhHHhHHHHhc-------------cCCcccccccccc
Q 010851 463 CGHMAGCMSCLSEIKA-------------KKGDCPVCRTKIN 491 (499)
Q Consensus 463 CgH~~~C~~C~~~~~~-------------~~~~Cp~Cr~~i~ 491 (499)
|.-+. |.+|..+|-. ++..||.||+.++
T Consensus 325 crp~w-c~~cla~~f~~rq~~v~r~~~~~~~~~cp~cr~~fc 365 (381)
T KOG3899|consen 325 CRPLW-CRSCLAQIFIGRQDNVYRYEYHRGSAQCPTCRKNFC 365 (381)
T ss_pred cccHH-HHHHHHHHHhhcccchhHHHHHhcCCCCcchhhceE
Confidence 56666 9999888753 2347999999876
No 233
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.91 E-value=9.1 Score=35.41 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=28.5
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHH
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE 475 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~ 475 (499)
..-..|+.|+....++++.|=||.| |++|+..
T Consensus 41 K~FdcCsLtLqPc~dPvit~~Gylf-drEaILe 72 (303)
T KOG3039|consen 41 KPFDCCSLTLQPCRDPVITPDGYLF-DREAILE 72 (303)
T ss_pred CCcceeeeecccccCCccCCCCeee-eHHHHHH
Confidence 3446999999999999999999999 9999865
No 234
>COG5183 SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification]
Probab=51.39 E-value=15 Score=40.03 Aligned_cols=54 Identities=22% Similarity=0.423 Sum_probs=39.6
Q ss_pred CCccccccccc--cCCceEEeCCCCc----hhhHHhHHHHhcc--CCccccccccccceeEee
Q 010851 443 GSSSSCVICWE--APVEGACVPCGHM----AGCMSCLSEIKAK--KGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 443 ~~~~~C~iC~~--~~~~~~~~pCgH~----~~C~~C~~~~~~~--~~~Cp~Cr~~i~~~~~~~ 497 (499)
++...|-||.. .+-++.+.||.+. +...+|.-.|... +++|-+|..+++ +-.||
T Consensus 10 ~d~~~CRICr~e~~~d~pLfhPCKC~GSIkYiH~eCL~eW~~~s~~~kCdiChy~~~-Fk~IY 71 (1175)
T COG5183 10 EDKRSCRICRTEDIRDDPLFHPCKCSGSIKYIHRECLMEWMECSGTKKCDICHYEYK-FKDIY 71 (1175)
T ss_pred ccchhceeecCCCCCCCcCcccccccchhHHHHHHHHHHHHhcCCCcceeeecceee-eeeec
Confidence 34479999884 5678899999854 3478999998865 458999988764 44444
No 235
>PF08746 zf-RING-like: RING-like domain; InterPro: IPR014857 This is a zinc finger domain that is related to the C3HC4 RING finger domain (IPR001841 from INTERPRO). ; PDB: 3NW0_A 2CT0_A.
Probab=46.84 E-value=21 Score=23.57 Aligned_cols=38 Identities=24% Similarity=0.615 Sum_probs=19.4
Q ss_pred cccccccCCceEEeC---CCCchhhHHhHHHHhccCC--ccccc
Q 010851 448 CVICWEAPVEGACVP---CGHMAGCMSCLSEIKAKKG--DCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~~~~~p---CgH~~~C~~C~~~~~~~~~--~Cp~C 486 (499)
|.+|.+-....+.=+ |+=.+ -..|.....+... .||.|
T Consensus 1 C~~C~~iv~~G~~C~~~~C~~r~-H~~C~~~y~r~~~~~~CP~C 43 (43)
T PF08746_consen 1 CEACKEIVTQGQRCSNRDCNVRL-HDDCFKKYFRHRSNPKCPNC 43 (43)
T ss_dssp -TTT-SB-SSSEE-SS--S--EE--HHHHHHHTTT-SS-B-TTT
T ss_pred CcccchhHeeeccCCCCccCchH-HHHHHHHHHhcCCCCCCcCC
Confidence 556666665554433 66555 7788888776543 69987
No 236
>KOG3113 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.54 E-value=29 Score=32.38 Aligned_cols=44 Identities=27% Similarity=0.326 Sum_probs=30.0
Q ss_pred ccccccc----ccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 446 SSCVICW----EAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 446 ~~C~iC~----~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
-.|+|-- +...-.++.+|||+| -..-...+.. ..|++|.+.+..
T Consensus 112 fiCPvtgleMng~~~F~~l~~CGcV~-SerAlKeika--s~C~~C~a~y~~ 159 (293)
T KOG3113|consen 112 FICPVTGLEMNGKYRFCALRCCGCVF-SERALKEIKA--SVCHVCGAAYQE 159 (293)
T ss_pred eecccccceecceEEEEEEeccceec-cHHHHHHhhh--ccccccCCcccc
Confidence 4777743 234445667999999 6665555553 469999998863
No 237
>PF04423 Rad50_zn_hook: Rad50 zinc hook motif; InterPro: IPR007517 The Mre11 complex (Mre11 Rad50 Nbs1) is central to chromosomal maintenance and functions in homologous recombination, telomere maintenance and sister chromatid association. The Rad50 coiled-coil region contains a dimer interface at the apex of the coiled coils in which pairs of conserved Cys-X-X-Cys motifs form interlocking hooks that bind one Zn ion. This alignment includes the zinc hook motif and a short stretch of coiled-coil on either side.; GO: 0004518 nuclease activity, 0005524 ATP binding, 0008270 zinc ion binding, 0006281 DNA repair; PDB: 1L8D_B.
Probab=44.58 E-value=9.5 Score=26.55 Aligned_cols=12 Identities=42% Similarity=1.171 Sum_probs=6.3
Q ss_pred CCcccccccccc
Q 010851 480 KGDCPVCRTKIN 491 (499)
Q Consensus 480 ~~~Cp~Cr~~i~ 491 (499)
...||+|.+++.
T Consensus 20 ~~~CPlC~r~l~ 31 (54)
T PF04423_consen 20 KGCCPLCGRPLD 31 (54)
T ss_dssp SEE-TTT--EE-
T ss_pred CCcCCCCCCCCC
Confidence 348999999886
No 238
>KOG1815 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=43.11 E-value=15 Score=38.12 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=26.8
Q ss_pred cccccccccCCc-eEEeCCCCchhhHHhHHHHh
Q 010851 446 SSCVICWEAPVE-GACVPCGHMAGCMSCLSEIK 477 (499)
Q Consensus 446 ~~C~iC~~~~~~-~~~~pCgH~~~C~~C~~~~~ 477 (499)
..|.||.+.... .+.+.|||.| |..|...-.
T Consensus 71 ~~c~ic~~~~~~~~~~~~c~H~~-c~~cw~~yl 102 (444)
T KOG1815|consen 71 VQCGICVESYDGEIIGLGCGHPF-CPPCWTGYL 102 (444)
T ss_pred ccCCcccCCCcchhhhcCCCcHH-HHHHHHHHh
Confidence 599999999985 7778999999 999988733
No 239
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=42.18 E-value=14 Score=39.96 Aligned_cols=46 Identities=11% Similarity=0.144 Sum_probs=29.3
Q ss_pred ccccccccC----CceEEeCCCCchhhHHhHHHHhcc------CCccccccccccce
Q 010851 447 SCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAK------KGDCPVCRTKINQV 493 (499)
Q Consensus 447 ~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~------~~~Cp~Cr~~i~~~ 493 (499)
.|-+|+... ....+-.|+|.+ |..|+..+..+ ...|++|..-|...
T Consensus 101 ~C~~E~S~~~ds~~i~P~~~~~~~~-CP~Ci~s~~DqL~~~~k~c~H~FC~~Ci~sW 156 (1134)
T KOG0825|consen 101 VCEKEHSPDVDSSNICPVQTHVENQ-CPNCLKSCNDQLEESEKHTAHYFCEECVGSW 156 (1134)
T ss_pred hhheecCCcccccCcCchhhhhhhh-hhHHHHHHHHHhhccccccccccHHHHhhhh
Confidence 555555542 222233499999 99999888763 23588887766543
No 240
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=41.79 E-value=19 Score=27.00 Aligned_cols=46 Identities=24% Similarity=0.565 Sum_probs=18.1
Q ss_pred ccccccccccCCc----eEEe---CCCCchhhHHhHHHHh-ccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE----GACV---PCGHMAGCMSCLSEIK-AKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~----~~~~---pCgH~~~C~~C~~~~~-~~~~~Cp~Cr~~i~ 491 (499)
...|.||-|..-. -+|+ -|+--+ |+.|.+-=. .....||.|+....
T Consensus 9 ~qiCqiCGD~VGl~~~Ge~FVAC~eC~fPv-Cr~CyEYErkeg~q~CpqCkt~yk 62 (80)
T PF14569_consen 9 GQICQICGDDVGLTENGEVFVACHECAFPV-CRPCYEYERKEGNQVCPQCKTRYK 62 (80)
T ss_dssp S-B-SSS--B--B-SSSSB--S-SSS------HHHHHHHHHTS-SB-TTT--B--
T ss_pred CcccccccCccccCCCCCEEEEEcccCCcc-chhHHHHHhhcCcccccccCCCcc
Confidence 3699999875421 1333 455555 999986533 34568999998765
No 241
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=41.77 E-value=4.4 Score=22.82 Aligned_cols=22 Identities=36% Similarity=0.807 Sum_probs=13.5
Q ss_pred hHHhHHHHhccCCccccccccc
Q 010851 469 CMSCLSEIKAKKGDCPVCRTKI 490 (499)
Q Consensus 469 C~~C~~~~~~~~~~Cp~Cr~~i 490 (499)
|..|...+......||.|..+|
T Consensus 2 Cp~CG~~~~~~~~fC~~CG~~l 23 (23)
T PF13240_consen 2 CPNCGAEIEDDAKFCPNCGTPL 23 (23)
T ss_pred CcccCCCCCCcCcchhhhCCcC
Confidence 5556555555555677776653
No 242
>COG5109 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=41.63 E-value=16 Score=35.11 Aligned_cols=39 Identities=23% Similarity=0.547 Sum_probs=27.7
Q ss_pred eEEeCCCCchhhHHhHHHHhcc---CCccccccccc--cceeEee
Q 010851 458 GACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKI--NQVIRLY 497 (499)
Q Consensus 458 ~~~~pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i--~~~~~~~ 497 (499)
++.+.|||+. -.+-+.++++. +-+||+|...- .+.+|+|
T Consensus 352 P~ml~CgHVI-skeal~~LS~nG~~~FKCPYCP~~~~~~~~~rvr 395 (396)
T COG5109 352 PVMLECGHVI-SKEALSVLSQNGVLSFKCPYCPEMSKYENILRVR 395 (396)
T ss_pred Ceeeecccee-eHHHHHHHhhcCcEEeeCCCCCcchhhhhhhccc
Confidence 5677899999 88888888764 34799996533 2455554
No 243
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=41.19 E-value=11 Score=38.27 Aligned_cols=32 Identities=28% Similarity=0.742 Sum_probs=22.4
Q ss_pred cccccccccCCce----EEeCCCCchhhHHhHHHHhc
Q 010851 446 SSCVICWEAPVEG----ACVPCGHMAGCMSCLSEIKA 478 (499)
Q Consensus 446 ~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~~~ 478 (499)
..|.||+...... ...-|+|.| |..|..+...
T Consensus 147 ~~C~iC~~e~~~~~~~f~~~~C~H~f-C~~C~k~~ie 182 (384)
T KOG1812|consen 147 EECGICFVEDPEAEDMFSVLKCGHRF-CKDCVKQHIE 182 (384)
T ss_pred ccCccCccccccHhhhHHHhcccchh-hhHHhHHHhh
Confidence 5899999332222 134799999 9999886544
No 244
>PF12906 RINGv: RING-variant domain; PDB: 2D8S_A 1VYX_A.
Probab=41.05 E-value=14 Score=24.99 Aligned_cols=39 Identities=31% Similarity=0.620 Sum_probs=23.0
Q ss_pred cccccccCCc--eEEeCCCCc----hhhHHhHHHHhcc--CCccccc
Q 010851 448 CVICWEAPVE--GACVPCGHM----AGCMSCLSEIKAK--KGDCPVC 486 (499)
Q Consensus 448 C~iC~~~~~~--~~~~pCgH~----~~C~~C~~~~~~~--~~~Cp~C 486 (499)
|-||++.... ....||+-. ++-..|+.+|... +..|++|
T Consensus 1 CrIC~~~~~~~~~li~pC~C~Gs~~~vH~~CL~~W~~~~~~~~C~~C 47 (47)
T PF12906_consen 1 CRICLEGEEEDEPLISPCRCKGSMKYVHRSCLERWIRESGNRKCEIC 47 (47)
T ss_dssp ETTTTEE-SSSS-EE-SSS-SSCCGSEECCHHHHHHHHHT-SB-TTT
T ss_pred CeEeCCcCCCCCceecccccCCCcchhHHHHHHHHHHhcCCCcCCCC
Confidence 6688876432 456788732 2467799998874 3578887
No 245
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=40.97 E-value=10 Score=23.40 Aligned_cols=15 Identities=27% Similarity=0.618 Sum_probs=11.2
Q ss_pred CccccccccccceeE
Q 010851 481 GDCPVCRTKINQVIR 495 (499)
Q Consensus 481 ~~Cp~Cr~~i~~~~~ 495 (499)
..||+|..+-..|++
T Consensus 18 ~~CP~Cg~~~~~F~~ 32 (33)
T cd00350 18 WVCPVCGAPKDKFEK 32 (33)
T ss_pred CcCcCCCCcHHHcEE
Confidence 479999887766654
No 246
>PLN02436 cellulose synthase A
Probab=39.29 E-value=18 Score=41.11 Aligned_cols=46 Identities=26% Similarity=0.666 Sum_probs=32.6
Q ss_pred ccccccccccC-------CceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 445 SSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
...|.||-|.. .-+++.-|+--. |..|.+--.+. +..||.|+...+
T Consensus 36 ~~iCqICGD~Vg~t~dGe~FVACn~C~fpv-Cr~Cyeyer~eg~~~Cpqckt~Y~ 89 (1094)
T PLN02436 36 GQTCQICGDEIELTVDGEPFVACNECAFPV-CRPCYEYERREGNQACPQCKTRYK 89 (1094)
T ss_pred CccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 35999999864 223344566666 99999765543 568999998776
No 247
>KOG3053 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.31 E-value=22 Score=33.21 Aligned_cols=51 Identities=27% Similarity=0.558 Sum_probs=35.0
Q ss_pred CCCCccccccccccCCceE----EeCCCCch----hhHHhHHHHhccC--------Ccccccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGA----CVPCGHMA----GCMSCLSEIKAKK--------GDCPVCRTKIN 491 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~----~~pCgH~~----~C~~C~~~~~~~~--------~~Cp~Cr~~i~ 491 (499)
+.+.+..|-||+....|-. +.||..+= ....|..+|...+ ..||.|+....
T Consensus 16 ~~e~eR~CWiCF~TdeDn~~a~WV~PCrCRGt~KWVHqsCL~rWiDEK~~~n~~q~V~C~QCqTEYi 82 (293)
T KOG3053|consen 16 NQELERCCWICFATDEDNRLAAWVHPCRCRGTTKWVHQSCLSRWIDEKQRGNPLQTVSCPQCQTEYI 82 (293)
T ss_pred ccccceeEEEEeccCcccchhhhcccccccCccHHHHHHHHHHHHhHHhcCCCCceeechhhcchhe
Confidence 3455689999997665543 34887432 2788999987642 25999987544
No 248
>KOG3268 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=36.85 E-value=22 Score=31.09 Aligned_cols=47 Identities=30% Similarity=0.847 Sum_probs=33.1
Q ss_pred CccccccccccCCce-----EE--eCCCCchhhHHhHHHHhcc----C-------Ccccccccccc
Q 010851 444 SSSSCVICWEAPVEG-----AC--VPCGHMAGCMSCLSEIKAK----K-------GDCPVCRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~-----~~--~pCgH~~~C~~C~~~~~~~----~-------~~Cp~Cr~~i~ 491 (499)
....|.||+.-.-+. ++ ..||.-| -.-|...|.+. + +.||+|..+|.
T Consensus 164 ~~~~cgicyayqldGTipDqtCdN~qCgkpF-HqiCL~dWLRgilTsRQSFdiiFGeCPYCS~Pia 228 (234)
T KOG3268|consen 164 ELGACGICYAYQLDGTIPDQTCDNIQCGKPF-HQICLTDWLRGILTSRQSFDIIFGECPYCSDPIA 228 (234)
T ss_pred hhhcccceeeeecCCccccccccccccCCcH-HHHHHHHHHHHHhhccceeeeeeccCCCCCCcce
Confidence 346899998644332 22 4799888 88898888752 1 36999999885
No 249
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.77 E-value=18 Score=31.16 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=21.2
Q ss_pred CCchhhHHhHHHHhccCCccccccccccce
Q 010851 464 GHMAGCMSCLSEIKAKKGDCPVCRTKINQV 493 (499)
Q Consensus 464 gH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 493 (499)
.+.| |..|..+... .||-|..+|...
T Consensus 27 ~~~f-C~kCG~~tI~---~Cp~C~~~IrG~ 52 (158)
T PF10083_consen 27 REKF-CSKCGAKTIT---SCPNCSTPIRGD 52 (158)
T ss_pred HHHH-HHHhhHHHHH---HCcCCCCCCCCc
Confidence 3567 9999988766 599999999854
No 250
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=34.39 E-value=7.7 Score=22.60 Aligned_cols=20 Identities=30% Similarity=0.723 Sum_probs=8.9
Q ss_pred hHHhHHHHhccCCccccccc
Q 010851 469 CMSCLSEIKAKKGDCPVCRT 488 (499)
Q Consensus 469 C~~C~~~~~~~~~~Cp~Cr~ 488 (499)
|.+|...+....+.||.|.-
T Consensus 3 CP~C~~~V~~~~~~Cp~CG~ 22 (26)
T PF10571_consen 3 CPECGAEVPESAKFCPHCGY 22 (26)
T ss_pred CCCCcCCchhhcCcCCCCCC
Confidence 33444444333344555543
No 251
>PLN02189 cellulose synthase
Probab=34.10 E-value=25 Score=39.95 Aligned_cols=46 Identities=26% Similarity=0.673 Sum_probs=32.1
Q ss_pred ccccccccccC----CceEEeC---CCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 445 SSSCVICWEAP----VEGACVP---CGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~----~~~~~~p---CgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
...|.||-|.. ..-.|+. |+--. |..|.+--.+. +..||.|+...+
T Consensus 34 ~~~C~iCgd~vg~~~~g~~fvaC~~C~fpv-Cr~Cyeyer~eg~q~CpqCkt~Y~ 87 (1040)
T PLN02189 34 GQVCEICGDEIGLTVDGDLFVACNECGFPV-CRPCYEYERREGTQNCPQCKTRYK 87 (1040)
T ss_pred CccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 35999999873 2224444 55555 99998765543 568999998776
No 252
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=33.49 E-value=21 Score=34.27 Aligned_cols=41 Identities=22% Similarity=0.585 Sum_probs=22.7
Q ss_pred CCceEEeCCCCchhhH--HhHHHHhccCCccccccccccceeEe
Q 010851 455 PVEGACVPCGHMAGCM--SCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 455 ~~~~~~~pCgH~~~C~--~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
..-.+.+.|||.-... .|-+.--...+.||+||. +..++.+
T Consensus 314 ~QP~vYl~CGHV~G~H~WG~~e~~g~~~r~CPmC~~-~gp~V~L 356 (429)
T KOG3842|consen 314 KQPWVYLNCGHVHGYHNWGVRENTGQRERECPMCRV-VGPYVPL 356 (429)
T ss_pred cCCeEEEeccccccccccccccccCcccCcCCeeee-ecceeee
Confidence 3445788999886321 111111112458999986 4446555
No 253
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=33.34 E-value=27 Score=34.94 Aligned_cols=31 Identities=32% Similarity=0.743 Sum_probs=24.7
Q ss_pred eEEeCCCCchhhHHhHHHHhcc--CCcccccccc
Q 010851 458 GACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTK 489 (499)
Q Consensus 458 ~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~ 489 (499)
.+.+.|||.| =..|+++|..+ +..||.|...
T Consensus 22 ~vsl~cghlF-gs~cie~wl~k~~~~~cp~c~~k 54 (463)
T KOG1645|consen 22 IVSLQCGHLF-GSQCIEKWLGKKTKMQCPLCSGK 54 (463)
T ss_pred Eeeecccccc-cHHHHHHHHhhhhhhhCcccCCh
Confidence 4567899999 99999998753 3479999654
No 254
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=31.76 E-value=45 Score=38.14 Aligned_cols=47 Identities=28% Similarity=0.621 Sum_probs=33.0
Q ss_pred CccccccccccC-------CceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010851 444 SSSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~ 491 (499)
....|.||-|.. .-+++.-|+--+ |+.|.+-=.+ .+..||.|+...+
T Consensus 16 ~~qiCqICGD~vg~~~~Ge~FVAC~eC~FPV-CrpCYEYEr~eG~q~CPqCktrYk 70 (1079)
T PLN02638 16 GGQVCQICGDNVGKTVDGEPFVACDVCAFPV-CRPCYEYERKDGNQSCPQCKTKYK 70 (1079)
T ss_pred CCceeeecccccCcCCCCCEEEEeccCCCcc-ccchhhhhhhcCCccCCccCCchh
Confidence 336999999863 224455677667 9999865443 3568999998775
No 255
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.98 E-value=27 Score=28.66 Aligned_cols=21 Identities=29% Similarity=0.854 Sum_probs=16.8
Q ss_pred hHHhHHHHhccCCccccccccccc
Q 010851 469 CMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 469 C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
|..|...... .||+|..+|..
T Consensus 31 cskcgeati~---qcp~csasirg 51 (160)
T COG4306 31 CSKCGEATIT---QCPICSASIRG 51 (160)
T ss_pred HhhhchHHHh---cCCccCCcccc
Confidence 9999877544 49999999975
No 256
>PF01671 ASFV_360: African swine fever virus multigene family 360 protein; InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=29.60 E-value=89 Score=28.46 Aligned_cols=78 Identities=14% Similarity=0.001 Sum_probs=38.7
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC-CHHH
Q 010851 23 QWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG-LEPT 101 (499)
Q Consensus 23 ~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g-~~~~ 101 (499)
.|++.+-.+.+.++-++-..++. . -|..|...++-.++-+.--+...+++.- -=+.+||.+. +.-.
T Consensus 91 ~Av~ynL~~AI~Yfyq~y~hl~~--W----RL~CaL~fNnvfdlHe~y~~eki~mdin-------eMM~lAC~~d~N~lt 157 (215)
T PF01671_consen 91 IAVQYNLKEAIQYFYQKYPHLND--W----RLICALYFNNVFDLHEIYNKEKIRMDIN-------EMMRLACMYDNNFLT 157 (215)
T ss_pred HHHHhhhHHHHHHHHHhccchhh--H----HHHHHHHhCCHHHHHHHHHHhhcCCCHH-------HHHHHHHcCCCCchH
Confidence 57778888888888886554432 1 1445554423344444443444444331 1244555442 2333
Q ss_pred HHHHHHCCCCCc
Q 010851 102 VRLLLSCGANAL 113 (499)
Q Consensus 102 v~~Ll~~ga~~~ 113 (499)
+-+=.-.|||+|
T Consensus 158 IYYCf~LGAdIN 169 (215)
T PF01671_consen 158 IYYCFALGADIN 169 (215)
T ss_pred HHHHHHhcccHH
Confidence 333334455554
No 257
>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=29.48 E-value=20 Score=22.37 Aligned_cols=15 Identities=20% Similarity=0.678 Sum_probs=10.8
Q ss_pred CccccccccccceeE
Q 010851 481 GDCPVCRTKINQVIR 495 (499)
Q Consensus 481 ~~Cp~Cr~~i~~~~~ 495 (499)
..||+|..+-..|.+
T Consensus 19 ~~CP~Cg~~~~~F~~ 33 (34)
T cd00729 19 EKCPICGAPKEKFEE 33 (34)
T ss_pred CcCcCCCCchHHcEE
Confidence 379999887665544
No 258
>PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A. The small G protein Rab3A plays an important role in the regulation of neurotransmitter release. The crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A shows that the effector domain of rabphilin-3A contacts Rab3A in two distinct areas. The first interface involves the Rab3A switch I and switch II regions, which are sensitive to the nucleotide-binding state of Rab3A. The second interface consists of a deep pocket in Rab3A that interacts with a SGAWFF structural element of rabphilin-3A. Sequence and structure analysis, and biochemical data suggest that this pocket, or Rab complementarity-determining region (RabCDR), establishes a specific interaction between each Rab protein and its effectors. It has been suggested that RabCDRs could be major determinants of effector specificity during vesicle trafficking and fusion [].; GO: 0008270 zinc ion binding, 0017137 Rab GTPase binding, 0006886 intracellular protein transport; PDB: 2CSZ_A 2ZET_C 1ZBD_B 3BC1_B 2CJS_C 2A20_A.
Probab=28.54 E-value=7.1 Score=32.34 Aligned_cols=45 Identities=27% Similarity=0.539 Sum_probs=29.4
Q ss_pred CccccccccccC-----CceEEeCCCCchhhHHhHHHHhc-cCCcccccccc
Q 010851 444 SSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTK 489 (499)
Q Consensus 444 ~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~ 489 (499)
+...|.+|...+ ...+..-|+|.+ |..|...... ..+.|-+|+..
T Consensus 53 ~~~~C~~C~~~fg~l~~~~~~C~~C~~~V-C~~C~~~~~~~~~WlC~vC~k~ 103 (118)
T PF02318_consen 53 GERHCARCGKPFGFLFNRGRVCVDCKHRV-CKKCGVYSKKEPIWLCKVCQKQ 103 (118)
T ss_dssp CCSB-TTTS-BCSCTSTTCEEETTTTEEE-ETTSEEETSSSCCEEEHHHHHH
T ss_pred CCcchhhhCCcccccCCCCCcCCcCCccc-cCccCCcCCCCCCEEChhhHHH
Confidence 346999998753 345677899999 9999665322 23469999763
No 259
>PF10235 Cript: Microtubule-associated protein CRIPT; InterPro: IPR019367 The CRIPT protein is a cytoskeletal protein involved in microtubule production. This C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners [].
Probab=28.44 E-value=24 Score=27.50 Aligned_cols=36 Identities=31% Similarity=0.601 Sum_probs=26.8
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..|-||....-.. ||.+ |..|+-+-- .|.+|...|.
T Consensus 45 ~~C~~CK~~v~q~-----g~~Y-Cq~CAYkkG----iCamCGKki~ 80 (90)
T PF10235_consen 45 SKCKICKTKVHQP-----GAKY-CQTCAYKKG----ICAMCGKKIL 80 (90)
T ss_pred ccccccccccccC-----CCcc-ChhhhcccC----cccccCCeec
Confidence 4899998765432 7777 999976644 5999998874
No 260
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=27.76 E-value=48 Score=30.55 Aligned_cols=40 Identities=28% Similarity=0.227 Sum_probs=27.1
Q ss_pred HHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q 010851 70 LIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN 111 (499)
Q Consensus 70 Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~ 111 (499)
|+++|+.-|.. |....|+=-+|.+.++.+..+.|++.|+.
T Consensus 1 lle~ga~wn~i--d~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFI--DYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCcccc--ChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 35666666666 55666777777777777777777777654
No 261
>PF07975 C1_4: TFIIH C1-like domain; InterPro: IPR004595 All proteins in this domain for which functions are known are components of the TFIIH complex which is involved in the initiation of transcription and nucleotide excision repair. It includes the yeast transcription factor Ssl1 (Suppressor of stem-loop protein 1) that is essential for translation initiation and affects UV resistance. The C-terminal region is essential for transcription activity. This regions binds three zinc atoms through two independent domain. The first contains a C4 zinc finger motif, whereas the second is characterised by a CX(2)CX(2-4)FCADCD motif. The solution structure of the second C-terminal domain revealed homology with the regulatory domain of protein kinase C [].; GO: 0006281 DNA repair, 0005634 nucleus; PDB: 1Z60_A.
Probab=27.57 E-value=37 Score=23.46 Aligned_cols=25 Identities=28% Similarity=0.741 Sum_probs=14.9
Q ss_pred CCCCchhhHHhHHHHhccCCcccccc
Q 010851 462 PCGHMAGCMSCLSEIKAKKGDCPVCR 487 (499)
Q Consensus 462 pCgH~~~C~~C~~~~~~~~~~Cp~Cr 487 (499)
.|++.| |.+|-.-+-..=..||-|.
T Consensus 26 ~C~~~F-C~dCD~fiHE~LH~CPGC~ 50 (51)
T PF07975_consen 26 KCKNHF-CIDCDVFIHETLHNCPGCE 50 (51)
T ss_dssp TTT--B--HHHHHTTTTTS-SSSTT-
T ss_pred CCCCcc-ccCcChhhhccccCCcCCC
Confidence 688999 9999766554444699884
No 262
>PF13248 zf-ribbon_3: zinc-ribbon domain
Probab=27.32 E-value=12 Score=21.68 Aligned_cols=21 Identities=38% Similarity=0.830 Sum_probs=11.4
Q ss_pred hHHhHHHHhccCCcccccccc
Q 010851 469 CMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 469 C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
|..|...+....+.||.|-.+
T Consensus 5 Cp~Cg~~~~~~~~fC~~CG~~ 25 (26)
T PF13248_consen 5 CPNCGAEIDPDAKFCPNCGAK 25 (26)
T ss_pred CcccCCcCCcccccChhhCCC
Confidence 555555444444567777554
No 263
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=27.19 E-value=23 Score=24.61 Aligned_cols=38 Identities=18% Similarity=0.577 Sum_probs=22.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhcc--CCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 491 (499)
-.|++|.+. .+..- + +..|...-... ...||+|...+.
T Consensus 3 f~CP~C~~~-~~~~~------L-~~H~~~~H~~~~~~v~CPiC~~~~~ 42 (54)
T PF05605_consen 3 FTCPYCGKG-FSESS------L-VEHCEDEHRSESKNVVCPICSSRVT 42 (54)
T ss_pred cCCCCCCCc-cCHHH------H-HHHHHhHCcCCCCCccCCCchhhhh
Confidence 478888883 33322 1 55555554432 247999987554
No 264
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.36 E-value=15 Score=38.61 Aligned_cols=117 Identities=21% Similarity=0.044 Sum_probs=70.6
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcC----------CcHHH--------HHHHH
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS----------GLINV--------AKTLI 71 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~----------g~~~~--------v~~Ll 71 (499)
+++....+.++++++...|....++........ +....++.+++++.. +..++ ...|+
T Consensus 48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~~ll 123 (503)
T KOG0513|consen 48 INQGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAPKLL 123 (503)
T ss_pred hhhhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhccccccCccccccchhhhhhhcCCCccc
Confidence 445667788888999989988766665543321 222333333333210 11122 23333
Q ss_pred HcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCH
Q 010851 72 ELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI 132 (499)
Q Consensus 72 ~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~ 132 (499)
....+.+.. ..+..++++........+++..++.++.....++..|.|+||.+...++.
T Consensus 124 ~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 124 EKFDDPNFI--KGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred ccccccccc--ccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc
Confidence 333333322 24566788888888888888777776666666777888888888877666
No 265
>PF10764 Gin: Inhibitor of sigma-G Gin; InterPro: IPR019700 Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB [].
Probab=26.33 E-value=55 Score=22.03 Aligned_cols=31 Identities=32% Similarity=0.739 Sum_probs=24.1
Q ss_pred ccccccccCCceEEeCCCCchhhHHhHHHHhcc
Q 010851 447 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK 479 (499)
Q Consensus 447 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~ 479 (499)
.|.||-+...+.+.+ .|+.. |..|-.++.+.
T Consensus 1 ~CiiC~~~~~~GI~I-~~~fI-C~~CE~~iv~~ 31 (46)
T PF10764_consen 1 KCIICGKEKEEGIHI-YGKFI-CSDCEKEIVNT 31 (46)
T ss_pred CeEeCCCcCCCCEEE-ECeEe-hHHHHHHhccC
Confidence 488999998887665 46665 99999888764
No 266
>KOG2034 consensus Vacuolar sorting protein PEP3/VPS18 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.87 E-value=37 Score=37.60 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=24.1
Q ss_pred ccccccccccCCce--EEeCCCCchhhHHhHHHHh
Q 010851 445 SSSCVICWEAPVEG--ACVPCGHMAGCMSCLSEIK 477 (499)
Q Consensus 445 ~~~C~iC~~~~~~~--~~~pCgH~~~C~~C~~~~~ 477 (499)
...|-+|.-..-.. .+.||||.| -+.|+.+..
T Consensus 817 ~d~C~~C~~~ll~~pF~vf~CgH~F-H~~Cl~~~v 850 (911)
T KOG2034|consen 817 QDSCDHCGRPLLIKPFYVFPCGHCF-HRDCLIRHV 850 (911)
T ss_pred ccchHHhcchhhcCcceeeeccchH-HHHHHHHHH
Confidence 36899998876443 334999999 999987654
No 267
>PF07191 zinc-ribbons_6: zinc-ribbons; InterPro: IPR010807 This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family 8 highly conserved cysteine residues. The function of the family is unknown.; PDB: 2JRP_A 2JNE_A.
Probab=24.42 E-value=5.2 Score=29.50 Aligned_cols=40 Identities=25% Similarity=0.630 Sum_probs=17.3
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..|+.|.......- +|.. |..|...... ...||-|..++.
T Consensus 2 ~~CP~C~~~L~~~~----~~~~-C~~C~~~~~~-~a~CPdC~~~Le 41 (70)
T PF07191_consen 2 NTCPKCQQELEWQG----GHYH-CEACQKDYKK-EAFCPDCGQPLE 41 (70)
T ss_dssp -B-SSS-SBEEEET----TEEE-ETTT--EEEE-EEE-TTT-SB-E
T ss_pred CcCCCCCCccEEeC----CEEE-Ccccccccee-cccCCCcccHHH
Confidence 36788876633221 4444 7777655332 235777776654
No 268
>KOG3970 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=24.21 E-value=67 Score=29.39 Aligned_cols=45 Identities=27% Similarity=0.568 Sum_probs=32.0
Q ss_pred cccccccccC--CceEEeCCCCchhhHHhHHHHhcc--------CCcccccccccc
Q 010851 446 SSCVICWEAP--VEGACVPCGHMAGCMSCLSEIKAK--------KGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~--~~~~~~pCgH~~~C~~C~~~~~~~--------~~~Cp~Cr~~i~ 491 (499)
..|..|--.. .+.+-+-|-|.| -+.|...+... .-.||.|..+|-
T Consensus 51 pNC~LC~t~La~gdt~RLvCyhlf-HW~ClneraA~lPanTAPaGyqCP~Cs~eiF 105 (299)
T KOG3970|consen 51 PNCRLCNTPLASGDTTRLVCYHLF-HWKCLNERAANLPANTAPAGYQCPCCSQEIF 105 (299)
T ss_pred CCCceeCCccccCcceeehhhhhH-HHHHhhHHHhhCCCcCCCCcccCCCCCCccC
Confidence 4677776544 344556799999 99999887642 126999988774
No 269
>PLN02400 cellulose synthase
Probab=22.30 E-value=47 Score=38.00 Aligned_cols=46 Identities=28% Similarity=0.639 Sum_probs=31.8
Q ss_pred ccccccccccC-------CceEEeCCCCchhhHHhHHHHhc-cCCcccccccccc
Q 010851 445 SSSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~ 491 (499)
.+.|.||-|.. .-+++.-|+--+ |+.|.+-=.+ .+..||.|+...+
T Consensus 36 gqiCqICGD~VG~t~dGe~FVAC~eCaFPV-CRpCYEYERkeGnq~CPQCkTrYk 89 (1085)
T PLN02400 36 GQICQICGDDVGVTETGDVFVACNECAFPV-CRPCYEYERKDGTQCCPQCKTRYR 89 (1085)
T ss_pred CceeeecccccCcCCCCCEEEEEccCCCcc-ccchhheecccCCccCcccCCccc
Confidence 36999999863 223445677666 9999854333 2458999998776
No 270
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=21.43 E-value=22 Score=37.57 Aligned_cols=63 Identities=21% Similarity=0.181 Sum_probs=0.0
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 24 WVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 24 Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
|+..+....+-.|++.++.++..|..|.+|+|+++-. |..++.+.++....+.+.. ...|.++
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~s-gdp~~~~~~~~~~~~~~~~--~~~~~~~ 465 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQIS-GDPRIIQLLLNCKVAISLK--SVNGMIA 465 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCC-CCHHHhhhhhhhhhhhhcc--ccccccc
No 271
>COG2093 DNA-directed RNA polymerase, subunit E'' [Transcription]
Probab=20.72 E-value=34 Score=24.54 Aligned_cols=21 Identities=29% Similarity=0.743 Sum_probs=15.7
Q ss_pred hHHhHHHHhccCCcccccccc
Q 010851 469 CMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 469 C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
|..|-.-+......||+|...
T Consensus 7 C~~Ck~l~~~d~e~CP~Cgs~ 27 (64)
T COG2093 7 CKNCKRLTPEDTEICPVCGST 27 (64)
T ss_pred HhhccccCCCCCccCCCCCCc
Confidence 888866666555679999876
No 272
>KOG0801 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=20.39 E-value=44 Score=28.88 Aligned_cols=24 Identities=33% Similarity=0.577 Sum_probs=16.1
Q ss_pred CCCccccccccccCCc---eEEeCCCC
Q 010851 442 DGSSSSCVICWEAPVE---GACVPCGH 465 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~---~~~~pCgH 465 (499)
..+..+|+||+|.... .+-+||-.
T Consensus 174 ~ddkGECvICLEdL~~GdtIARLPCLC 200 (205)
T KOG0801|consen 174 KDDKGECVICLEDLEAGDTIARLPCLC 200 (205)
T ss_pred cccCCcEEEEhhhccCCCceeccceEE
Confidence 3566899999987643 34457753
No 273
>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.
Probab=20.09 E-value=49 Score=25.95 Aligned_cols=35 Identities=31% Similarity=0.715 Sum_probs=25.2
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
..|..|.++-+.-+ -|.. |..|+..+.. |+-|..+
T Consensus 56 ~kC~~C~qktVk~A----Yh~i-C~~Ca~~~~v----CaKC~k~ 90 (92)
T PF10217_consen 56 KKCNKCQQKTVKHA----YHVI-CDPCAKELKV----CAKCGKP 90 (92)
T ss_pred ccccccccchHHHH----HHHH-HHHHHHhhcc----CcccCCC
Confidence 46777766554332 3777 9999999876 9999764
Done!