Query 010851
Match_columns 499
No_of_seqs 451 out of 4187
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7b_A Euchromatic histone-lys 100.0 3.3E-36 1.1E-40 284.0 22.6 220 8-243 2-222 (237)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-36 4.9E-41 290.0 18.2 218 8-241 1-233 (253)
3 1oy3_D Transcription factor in 100.0 2.7E-36 9.1E-41 291.8 19.0 214 11-240 3-267 (282)
4 4gpm_A Engineered protein OR26 100.0 7.7E-36 2.6E-40 266.8 20.6 159 19-183 6-164 (169)
5 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-35 5.2E-40 288.2 23.9 224 8-250 50-273 (285)
6 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-35 3.9E-40 285.2 22.1 209 16-242 2-210 (261)
7 2xai_A ASB-9, ankyrin repeat a 100.0 2.4E-35 8.2E-40 282.9 21.5 222 7-240 26-247 (261)
8 1k1a_A B-cell lymphoma 3-encod 100.0 3.9E-35 1.3E-39 277.1 20.7 214 11-240 3-225 (241)
9 3ljn_A Hypothetical protein; a 100.0 5.4E-35 1.9E-39 294.1 19.2 220 4-241 7-254 (364)
10 2dzn_A Probable 26S proteasome 100.0 3.2E-34 1.1E-38 268.5 22.1 211 17-240 2-217 (228)
11 4b93_B Ankyrin repeat domain-c 100.0 3.9E-35 1.3E-39 282.8 16.1 217 10-241 4-228 (269)
12 1wdy_A 2-5A-dependent ribonucl 100.0 6.9E-34 2.4E-38 274.7 23.5 221 7-242 28-264 (285)
13 3utm_A Tankyrase-1; tankyrase, 100.0 4.4E-34 1.5E-38 284.8 22.5 218 7-240 48-322 (351)
14 3aji_A 26S proteasome non-ATPa 100.0 1.1E-33 3.6E-38 265.7 21.2 211 14-240 3-214 (231)
15 2f8y_A Notch homolog 1, transl 100.0 3.7E-33 1.3E-37 260.5 22.9 199 7-211 14-214 (223)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-33 4.3E-38 269.6 19.9 191 12-208 52-243 (253)
17 3aji_A 26S proteasome non-ATPa 100.0 2.6E-33 8.9E-38 263.0 21.4 187 10-202 33-219 (231)
18 2fo1_E LIN-12 protein; beta-ba 100.0 4.9E-34 1.7E-38 288.3 16.8 225 4-242 111-357 (373)
19 1oy3_D Transcription factor in 100.0 1.4E-33 4.7E-38 272.7 19.2 185 10-200 38-270 (282)
20 1n11_A Ankyrin; clathrin, BAND 100.0 2.7E-33 9.2E-38 288.7 22.5 218 7-240 4-221 (437)
21 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-34 4.4E-39 273.2 11.3 216 11-240 2-228 (236)
22 4g8k_A 2-5A-dependent ribonucl 100.0 6.6E-33 2.2E-37 275.9 23.4 216 14-242 22-284 (337)
23 3b7b_A Euchromatic histone-lys 100.0 6.3E-33 2.2E-37 261.4 21.8 197 7-209 34-231 (237)
24 1k1a_A B-cell lymphoma 3-encod 100.0 4.9E-33 1.7E-37 262.6 21.0 193 6-204 35-232 (241)
25 1n11_A Ankyrin; clathrin, BAND 100.0 6.4E-33 2.2E-37 285.9 22.6 221 7-243 169-389 (437)
26 4b93_B Ankyrin repeat domain-c 100.0 1.7E-33 5.7E-38 271.3 16.5 185 10-200 45-230 (269)
27 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-32 4.5E-37 265.7 22.8 221 15-252 3-239 (285)
28 2dzn_A Probable 26S proteasome 100.0 2.9E-32 1E-36 255.2 21.9 182 12-199 31-219 (228)
29 2rfa_A Transient receptor pote 100.0 1.4E-32 4.8E-37 258.3 19.8 189 16-210 2-219 (232)
30 3d9h_A CDNA FLJ77766, highly s 100.0 2.5E-32 8.5E-37 265.5 22.1 184 7-198 82-265 (285)
31 1s70_B 130 kDa myosin-binding 100.0 6.1E-33 2.1E-37 271.0 17.4 214 13-240 36-274 (299)
32 3eu9_A Huntingtin-interacting 100.0 2.9E-32 9.8E-37 256.7 20.8 227 10-252 2-230 (240)
33 3ljn_A Hypothetical protein; a 100.0 3.5E-33 1.2E-37 280.9 14.7 230 7-244 43-302 (364)
34 2rfm_A Putative ankyrin repeat 100.0 1.3E-32 4.3E-37 251.2 16.5 164 9-178 27-190 (192)
35 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-31 4.2E-36 239.5 20.5 160 13-178 10-169 (169)
36 3utm_A Tankyrase-1; tankyrase, 100.0 4.7E-32 1.6E-36 270.1 19.1 216 10-241 17-290 (351)
37 1ikn_D Protein (I-kappa-B-alph 100.0 3.5E-32 1.2E-36 256.5 16.4 179 8-192 36-223 (236)
38 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.6E-32 2.6E-36 238.7 17.4 159 15-180 3-162 (162)
39 3kea_A K1L; tropism, ANK repea 100.0 9E-33 3.1E-37 268.6 11.9 192 7-208 21-215 (285)
40 3hra_A Ankyrin repeat family p 100.0 2.4E-31 8.1E-36 244.1 20.6 189 14-208 2-198 (201)
41 3v30_A DNA-binding protein rfx 100.0 5.7E-32 1.9E-36 242.2 15.9 167 17-189 2-169 (172)
42 2fo1_E LIN-12 protein; beta-ba 100.0 5.7E-32 2E-36 273.2 17.5 197 6-208 155-366 (373)
43 2rfa_A Transient receptor pote 100.0 1E-31 3.4E-36 252.5 17.4 175 7-183 27-225 (232)
44 3v31_A Ankyrin repeat family A 100.0 1.5E-31 5.2E-36 238.2 17.3 160 16-181 2-161 (167)
45 3hra_A Ankyrin repeat family p 100.0 3.1E-31 1.1E-35 243.3 19.8 165 8-178 30-201 (201)
46 2f8y_A Notch homolog 1, transl 100.0 8.8E-31 3E-35 244.4 21.7 169 7-181 48-217 (223)
47 1s70_B 130 kDa myosin-binding 100.0 2.4E-31 8.3E-36 259.6 18.5 187 7-199 63-276 (299)
48 3f6q_A Integrin-linked protein 100.0 3.6E-31 1.2E-35 238.7 17.6 167 15-187 3-170 (179)
49 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-30 3.6E-35 259.9 22.6 217 7-242 48-312 (337)
50 3twr_A Tankyrase-2; ankyrin re 100.0 3.9E-31 1.3E-35 235.1 17.1 160 13-179 4-164 (165)
51 4gpm_A Engineered protein OR26 100.0 4.9E-31 1.7E-35 235.6 17.1 138 6-146 26-163 (169)
52 2etb_A Transient receptor pote 100.0 1.5E-31 5E-36 255.5 14.1 169 7-181 29-247 (256)
53 2etb_A Transient receptor pote 100.0 1.2E-31 4.1E-36 256.1 13.2 190 17-209 2-242 (256)
54 1awc_B Protein (GA binding pro 100.0 1.5E-30 5.3E-35 228.3 19.2 152 16-174 1-152 (153)
55 2pnn_A Transient receptor pote 100.0 2.9E-31 1E-35 256.0 14.0 202 8-212 4-257 (273)
56 3eu9_A Huntingtin-interacting 100.0 2.8E-30 9.6E-35 243.0 20.0 198 7-210 32-232 (240)
57 4hbd_A KN motif and ankyrin re 100.0 1.1E-30 3.7E-35 252.7 16.9 165 9-179 103-274 (276)
58 2pnn_A Transient receptor pote 100.0 5E-31 1.7E-35 254.3 14.2 168 12-183 49-262 (273)
59 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.4E-30 1.8E-34 225.4 18.2 154 16-177 1-155 (156)
60 1sw6_A Regulatory protein SWI6 100.0 1E-30 3.5E-35 259.2 13.6 178 7-198 120-326 (327)
61 3kea_A K1L; tropism, ANK repea 100.0 1.6E-30 5.4E-35 252.7 14.6 187 8-210 55-243 (285)
62 3jxi_A Vanilloid receptor-rela 100.0 1.6E-30 5.4E-35 248.8 13.5 164 14-181 43-251 (260)
63 3jxi_A Vanilloid receptor-rela 100.0 1.9E-30 6.6E-35 248.1 11.6 192 14-209 2-246 (260)
64 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.4E-30 8.2E-35 244.8 10.8 168 14-188 2-172 (239)
65 2vge_A RELA-associated inhibit 100.0 8.9E-30 3E-34 239.3 13.6 191 33-240 1-197 (229)
66 2vge_A RELA-associated inhibit 100.0 1.2E-30 4E-35 245.3 4.9 183 10-201 14-201 (229)
67 1sw6_A Regulatory protein SWI6 100.0 2.1E-29 7.3E-34 249.7 10.2 198 19-240 99-325 (327)
68 1d9s_A Cyclin-dependent kinase 100.0 7.8E-29 2.7E-33 213.0 12.2 133 8-144 3-136 (136)
69 1bi7_B P16INK4A, MTS1, multipl 100.0 4.6E-29 1.6E-33 219.8 10.6 143 11-159 6-149 (156)
70 4hbd_A KN motif and ankyrin re 100.0 3.4E-29 1.2E-33 242.2 9.9 187 16-208 75-270 (276)
71 3v30_A DNA-binding protein rfx 100.0 5E-28 1.7E-32 216.4 15.2 143 10-157 29-171 (172)
72 1d9s_A Cyclin-dependent kinase 100.0 4.9E-28 1.7E-32 208.0 12.1 134 40-180 2-136 (136)
73 2rfm_A Putative ankyrin repeat 99.9 1.5E-27 5.2E-32 217.4 14.9 160 43-208 28-187 (192)
74 3t8k_A Uncharacterized protein 99.9 1.1E-28 3.7E-33 224.0 7.0 159 17-183 6-182 (186)
75 2jab_A H10-2-G3; HER2, darpin, 99.9 4.7E-27 1.6E-31 201.9 16.2 127 13-142 10-136 (136)
76 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.6E-27 3.3E-31 207.7 17.1 133 7-142 37-169 (169)
77 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.1E-27 1.4E-31 208.1 14.4 134 7-144 28-162 (162)
78 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-26 4.7E-31 195.2 15.9 126 16-144 1-126 (126)
79 3v31_A Ankyrin repeat family A 99.9 2.4E-26 8.3E-31 204.4 16.4 154 49-208 2-155 (167)
80 3f6q_A Integrin-linked protein 99.9 8.7E-27 3E-31 209.9 13.6 137 7-146 29-165 (179)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 8.8E-27 3E-31 205.1 11.3 144 43-193 5-149 (156)
82 1awc_B Protein (GA binding pro 99.9 8E-26 2.7E-30 198.1 15.1 149 50-205 2-150 (153)
83 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.6E-26 2.9E-30 198.4 14.8 130 7-141 26-155 (156)
84 3c5r_A BARD-1, BRCA1-associate 99.9 7.8E-27 2.7E-31 200.6 7.7 127 12-141 5-131 (137)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-25 9.5E-30 187.2 16.2 126 49-180 1-126 (126)
86 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-25 7.9E-30 197.6 16.3 149 46-201 4-153 (165)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-26 7.6E-31 217.5 10.2 148 14-167 34-193 (239)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-25 5.9E-30 192.0 14.5 127 46-178 10-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 5E-26 1.7E-30 195.6 10.3 133 40-179 1-133 (137)
90 3deo_A Signal recognition part 99.9 1.5E-25 5.1E-30 202.7 13.2 142 13-177 40-181 (183)
91 3ui2_A Signal recognition part 99.9 1.6E-25 5.4E-30 212.3 12.9 145 13-180 41-185 (244)
92 3t8k_A Uncharacterized protein 99.9 2.1E-26 7.1E-31 209.0 6.2 135 9-146 29-181 (186)
93 3ehr_A Osteoclast-stimulating 99.9 4.2E-26 1.4E-30 212.9 7.8 132 12-146 68-200 (222)
94 3aaa_C Myotrophin, protein V-1 99.9 2.6E-25 8.8E-30 187.4 11.1 112 14-128 4-115 (123)
95 2b0o_E UPLC1; arfgap, structur 99.9 6.7E-25 2.3E-29 214.5 14.0 143 15-168 149-299 (301)
96 2aja_A Ankyrin repeat family p 99.9 1.1E-26 3.9E-31 233.4 0.6 160 12-185 87-255 (376)
97 3jue_A Arfgap with coiled-coil 99.9 8.8E-24 3E-28 211.5 15.3 148 13-164 195-346 (368)
98 3ehr_A Osteoclast-stimulating 99.9 1.8E-24 6.1E-29 201.8 9.3 135 45-185 68-203 (222)
99 3aaa_C Myotrophin, protein V-1 99.9 6.4E-24 2.2E-28 178.8 11.7 113 47-165 4-116 (123)
100 3lvq_E ARF-GAP with SH3 domain 99.9 2E-23 6.8E-28 218.5 16.1 128 16-146 131-267 (497)
101 1dcq_A PYK2-associated protein 99.9 2E-22 6.7E-27 194.7 16.5 125 18-144 131-263 (278)
102 3deo_A Signal recognition part 99.9 3.8E-25 1.3E-29 200.0 -2.4 115 47-168 41-156 (183)
103 2b0o_E UPLC1; arfgap, structur 99.9 3.6E-22 1.2E-26 195.1 15.6 174 13-199 87-297 (301)
104 1dcq_A PYK2-associated protein 99.9 9E-22 3.1E-26 190.1 18.2 167 11-181 60-264 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.7E-22 9.3E-27 160.0 12.0 91 17-110 2-92 (93)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.7E-22 2E-26 158.1 12.7 93 49-144 1-93 (93)
107 2l6b_A NR1C; ankyrin, consensu 99.9 1.6E-22 5.4E-27 168.0 7.4 107 13-122 5-111 (115)
108 2aja_A Ankyrin repeat family p 99.9 4.6E-23 1.6E-27 207.0 3.4 174 16-208 64-245 (376)
109 3lvq_E ARF-GAP with SH3 domain 99.9 1.4E-21 4.9E-26 204.4 14.8 138 50-191 132-276 (497)
110 2l6b_A NR1C; ankyrin, consensu 99.9 7.6E-22 2.6E-26 163.9 8.5 109 45-158 4-112 (115)
111 3jue_A Arfgap with coiled-coil 99.8 3.8E-21 1.3E-25 192.4 13.3 131 47-180 196-326 (368)
112 3ui2_A Signal recognition part 99.8 2.1E-21 7.1E-26 183.9 9.3 139 16-164 14-153 (244)
113 2zgd_A 3 repeat synthetic anky 99.8 4E-19 1.4E-23 146.3 11.8 92 11-105 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 7.9E-19 2.7E-23 144.5 10.9 93 43-138 17-109 (110)
115 2vje_A E3 ubiquitin-protein li 99.4 7.1E-14 2.4E-18 102.2 3.5 56 444-499 7-64 (64)
116 2vje_B MDM4 protein; proto-onc 99.4 7.6E-14 2.6E-18 101.6 3.4 55 445-499 7-63 (63)
117 2ea5_A Cell growth regulator w 99.3 5.9E-13 2E-17 98.3 3.3 53 442-498 12-64 (68)
118 2yho_A E3 ubiquitin-protein li 99.2 5.9E-12 2E-16 96.0 2.2 51 444-498 17-67 (79)
119 4ic3_A E3 ubiquitin-protein li 99.1 1.5E-11 5.2E-16 92.6 2.3 52 444-499 23-74 (74)
120 2ecg_A Baculoviral IAP repeat- 99.1 2.8E-11 9.6E-16 91.5 2.1 52 444-499 24-75 (75)
121 2d8t_A Dactylidin, ring finger 99.1 1E-10 3.5E-15 87.4 4.6 49 443-492 13-61 (71)
122 2ecn_A Ring finger protein 141 99.0 1.3E-10 4.5E-15 86.6 4.0 54 442-497 12-65 (70)
123 2csy_A Zinc finger protein 183 99.0 2.5E-10 8.6E-15 87.7 5.6 50 442-492 12-61 (81)
124 2djb_A Polycomb group ring fin 99.0 2.5E-10 8.5E-15 85.5 5.0 52 441-493 11-63 (72)
125 3ng2_A RNF4, snurf, ring finge 99.0 1.3E-10 4.6E-15 86.8 2.2 53 444-497 9-70 (71)
126 2ysl_A Tripartite motif-contai 99.0 7E-10 2.4E-14 83.3 5.9 49 443-492 18-69 (73)
127 2xeu_A Ring finger protein 4; 99.0 2.1E-10 7.1E-15 83.8 2.8 52 445-497 3-63 (64)
128 2kiz_A E3 ubiquitin-protein li 98.9 7E-10 2.4E-14 82.3 5.2 53 442-495 11-66 (69)
129 2ea6_A Ring finger protein 4; 98.9 3.4E-10 1.2E-14 84.0 3.3 49 443-492 13-68 (69)
130 1chc_A Equine herpes virus-1 r 98.9 3.1E-10 1.1E-14 84.0 2.9 52 445-497 5-57 (68)
131 4ayc_A E3 ubiquitin-protein li 98.9 3.8E-10 1.3E-14 96.1 3.8 48 446-494 54-101 (138)
132 2yur_A Retinoblastoma-binding 98.9 9.1E-10 3.1E-14 82.9 3.9 49 442-491 12-63 (74)
133 2ep4_A Ring finger protein 24; 98.9 7E-10 2.4E-14 83.6 3.0 54 442-496 12-68 (74)
134 1e4u_A Transcriptional repress 98.9 7.8E-10 2.7E-14 83.7 3.1 55 442-497 8-67 (78)
135 2ecm_A Ring finger and CHY zin 98.9 8.5E-10 2.9E-14 77.8 3.1 46 445-491 5-54 (55)
136 2ecw_A Tripartite motif-contai 98.9 1.9E-09 6.4E-14 83.5 5.1 48 443-491 17-70 (85)
137 2l0b_A E3 ubiquitin-protein li 98.9 1.4E-09 4.6E-14 85.5 4.3 49 443-492 38-89 (91)
138 2ct2_A Tripartite motif protei 98.9 1.8E-09 6.3E-14 84.2 4.9 49 442-491 12-67 (88)
139 3ztg_A E3 ubiquitin-protein li 98.9 1.5E-09 5E-14 85.6 4.3 49 441-490 9-60 (92)
140 2ect_A Ring finger protein 126 98.9 1.1E-09 3.9E-14 83.3 3.5 50 442-492 12-64 (78)
141 2ecy_A TNF receptor-associated 98.8 1.2E-09 4.2E-14 80.2 3.3 49 443-492 13-62 (66)
142 1iym_A EL5; ring-H2 finger, ub 98.8 1.2E-09 4.2E-14 77.0 2.8 46 445-491 5-54 (55)
143 2ysj_A Tripartite motif-contai 98.8 4.6E-09 1.6E-13 76.3 5.5 44 442-486 17-63 (63)
144 2egp_A Tripartite motif-contai 98.8 7.4E-10 2.5E-14 84.6 1.2 49 442-491 9-64 (79)
145 1t1h_A Gspef-atpub14, armadill 98.8 2.9E-09 1E-13 81.0 4.6 48 443-491 6-54 (78)
146 2ecv_A Tripartite motif-contai 98.8 2E-09 6.9E-14 83.3 3.3 48 443-491 17-70 (85)
147 1x4j_A Ring finger protein 38; 98.8 1.6E-09 5.5E-14 81.8 2.5 48 444-492 22-72 (75)
148 3lrq_A E3 ubiquitin-protein li 98.8 2.2E-09 7.7E-14 85.8 2.8 47 444-491 21-69 (100)
149 2ecj_A Tripartite motif-contai 98.7 6.5E-09 2.2E-13 74.1 3.8 43 443-486 13-58 (58)
150 3fl2_A E3 ubiquitin-protein li 98.7 6.1E-09 2.1E-13 86.9 3.8 47 445-492 52-99 (124)
151 2y43_A E3 ubiquitin-protein li 98.7 5.5E-09 1.9E-13 83.4 3.3 48 444-492 21-69 (99)
152 2ckl_A Polycomb group ring fin 98.7 8E-09 2.7E-13 83.9 4.2 49 443-492 13-62 (108)
153 1g25_A CDK-activating kinase a 98.7 4.6E-09 1.6E-13 76.8 2.4 46 445-491 3-54 (65)
154 2kr4_A Ubiquitin conjugation f 98.7 1.6E-08 5.5E-13 78.1 5.3 50 442-492 11-60 (85)
155 3t6p_A Baculoviral IAP repeat- 98.7 4.2E-09 1.5E-13 102.8 1.8 52 444-499 294-345 (345)
156 1bor_A Transcription factor PM 98.7 1.9E-09 6.6E-14 76.2 -0.5 45 443-491 4-48 (56)
157 2y1n_A E3 ubiquitin-protein li 98.7 1.3E-08 4.5E-13 99.8 5.1 50 446-496 333-383 (389)
158 3l11_A E3 ubiquitin-protein li 98.7 4.6E-09 1.6E-13 86.5 1.3 49 443-492 13-62 (115)
159 1wgm_A Ubiquitin conjugation f 98.6 4.5E-08 1.5E-12 77.6 6.3 48 443-491 20-68 (98)
160 1z6u_A NP95-like ring finger p 98.6 1.5E-08 5E-13 87.3 3.7 48 444-492 77-125 (150)
161 2kre_A Ubiquitin conjugation f 98.6 6.4E-08 2.2E-12 77.0 7.0 49 442-491 26-74 (100)
162 3hct_A TNF receptor-associated 98.6 2.5E-08 8.6E-13 82.3 4.2 49 443-492 16-65 (118)
163 1v87_A Deltex protein 2; ring- 98.6 1.9E-08 6.6E-13 82.5 3.2 46 446-492 26-94 (114)
164 2ckl_B Ubiquitin ligase protei 98.6 1.7E-08 5.9E-13 88.7 3.0 48 443-491 52-101 (165)
165 2ecl_A Ring-box protein 2; RNF 98.6 2.9E-08 1E-12 75.9 3.9 46 445-491 15-75 (81)
166 3knv_A TNF receptor-associated 98.6 2.8E-08 9.5E-13 84.5 3.6 47 443-490 29-76 (141)
167 1jm7_A BRCA1, breast cancer ty 98.6 1.6E-08 5.5E-13 82.7 1.8 46 445-491 21-69 (112)
168 1rmd_A RAG1; V(D)J recombinati 98.5 2.2E-08 7.5E-13 82.5 2.1 48 444-492 22-70 (116)
169 4ap4_A E3 ubiquitin ligase RNF 98.5 4.7E-08 1.6E-12 82.5 3.2 46 445-491 7-59 (133)
170 4ap4_A E3 ubiquitin ligase RNF 98.4 6.4E-08 2.2E-12 81.7 2.8 53 444-497 71-132 (133)
171 3dpl_R Ring-box protein 1; ubi 98.4 2.3E-07 7.8E-12 74.4 4.3 46 445-491 37-100 (106)
172 1jm7_B BARD1, BRCA1-associated 98.4 4.4E-08 1.5E-12 80.7 -0.1 45 444-491 21-66 (117)
173 2c2l_A CHIP, carboxy terminus 98.3 4.4E-07 1.5E-11 86.9 4.2 47 444-491 207-254 (281)
174 3hcs_A TNF receptor-associated 98.2 4.9E-07 1.7E-11 79.7 3.6 49 443-492 16-65 (170)
175 2yu4_A E3 SUMO-protein ligase 98.2 6.3E-07 2.2E-11 70.5 3.8 45 444-489 6-59 (94)
176 2f42_A STIP1 homology and U-bo 98.2 9E-07 3.1E-11 77.6 4.1 48 444-492 105-153 (179)
177 4a0k_B E3 ubiquitin-protein li 98.1 4E-07 1.4E-11 74.1 0.5 46 445-491 48-111 (117)
178 3htk_C E3 SUMO-protein ligase 97.9 6.9E-06 2.4E-10 75.6 5.0 47 444-491 180-231 (267)
179 2d8s_A Cellular modulator of i 97.9 5.2E-06 1.8E-10 62.8 3.0 48 444-492 14-70 (80)
180 2bay_A PRE-mRNA splicing facto 97.8 9.6E-06 3.3E-10 57.8 3.1 51 446-497 4-57 (61)
181 1wim_A KIAA0161 protein; ring 97.7 8.6E-06 2.9E-10 64.0 1.7 44 445-489 5-61 (94)
182 3vk6_A E3 ubiquitin-protein li 97.4 0.00012 4.2E-09 56.3 4.4 49 447-496 3-53 (101)
183 2ct0_A Non-SMC element 1 homol 97.3 0.00031 1.1E-08 51.8 5.1 49 443-492 13-64 (74)
184 1vyx_A ORF K3, K3RING; zinc-bi 96.9 0.00041 1.4E-08 49.1 2.5 48 443-491 4-58 (60)
185 3k1l_B Fancl; UBC, ring, RWD, 96.7 0.00035 1.2E-08 66.5 1.0 49 443-492 306-373 (381)
186 2ko5_A Ring finger protein Z; 95.4 0.011 3.9E-07 44.4 3.5 48 446-496 29-77 (99)
187 2cs3_A Protein C14ORF4, MY039 93.4 0.05 1.7E-06 39.4 2.8 32 445-477 15-50 (93)
188 3nw0_A Non-structural maintena 89.2 0.29 1E-05 44.8 4.1 47 445-492 180-229 (238)
189 2jun_A Midline-1; B-BOX, TRIM, 89.0 0.14 4.7E-06 40.0 1.5 30 446-476 4-36 (101)
190 1weo_A Cellulose synthase, cat 66.8 7 0.00024 29.1 4.1 46 445-491 16-69 (93)
191 2fiy_A Protein FDHE homolog; F 66.3 0.89 3.1E-05 43.2 -0.9 45 445-489 182-231 (309)
192 3ql9_A Transcriptional regulat 65.1 4.5 0.00016 32.8 3.2 50 439-489 51-111 (129)
193 2d8v_A Zinc finger FYVE domain 54.0 6.4 0.00022 27.5 1.9 34 442-477 5-39 (67)
194 2lbm_A Transcriptional regulat 51.4 12 0.00039 31.0 3.4 48 441-489 59-117 (142)
195 1zbd_B Rabphilin-3A; G protein 49.7 1.2 4.2E-05 36.6 -2.7 45 444-489 54-107 (134)
196 2lri_C Autoimmune regulator; Z 47.8 9.9 0.00034 26.8 2.2 43 446-489 13-59 (66)
197 2zet_C Melanophilin; complex, 43.7 2.5 8.5E-05 35.6 -1.8 45 444-489 67-117 (153)
198 3mkq_B Coatomer subunit alpha; 42.3 1.1E+02 0.0037 26.1 8.3 132 16-176 7-139 (177)
199 3i2d_A E3 SUMO-protein ligase 40.0 13 0.00045 35.8 2.4 45 446-491 250-299 (371)
200 1z60_A TFIIH basal transcripti 37.8 13 0.00044 25.5 1.4 40 446-486 16-58 (59)
201 4fo9_A E3 SUMO-protein ligase 37.3 16 0.00054 35.2 2.4 45 446-491 216-265 (360)
202 2l5u_A Chromodomain-helicase-D 37.1 17 0.00058 25.0 2.0 45 443-488 9-57 (61)
203 1wil_A KIAA1045 protein; ring 34.2 32 0.0011 25.3 3.0 42 444-487 14-74 (89)
204 2csz_A Synaptotagmin-like prot 31.7 3.7 0.00013 29.8 -2.2 46 443-489 23-73 (76)
205 2yql_A PHD finger protein 21A; 30.4 8.4 0.00029 26.0 -0.6 45 443-488 7-55 (56)
206 1mm2_A MI2-beta; PHD, zinc fin 30.1 8.7 0.0003 26.5 -0.5 48 442-490 6-57 (61)
207 4g26_A Pentatricopeptide repea 29.8 69 0.0023 32.3 6.0 141 21-175 33-198 (501)
208 3u5n_A E3 ubiquitin-protein li 26.2 10 0.00035 33.5 -0.9 48 442-490 4-55 (207)
209 2pv0_B DNA (cytosine-5)-methyl 25.3 51 0.0018 31.9 3.8 52 438-490 86-149 (386)
210 3m62_A Ubiquitin conjugation f 24.7 60 0.002 35.5 4.5 51 441-492 887-938 (968)
211 1wev_A Riken cDNA 1110020M19; 23.0 9.7 0.00033 28.6 -1.5 48 443-491 14-74 (88)
212 1fp0_A KAP-1 corepressor; PHD 22.0 25 0.00085 26.3 0.6 48 441-489 21-72 (88)
213 1y02_A CARP2, FYVE-ring finger 20.8 12 0.00041 29.9 -1.4 43 446-489 20-66 (120)
214 2e6r_A Jumonji/ARID domain-con 20.2 20 0.00069 27.0 -0.2 47 442-489 13-66 (92)
No 1
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.3e-36 Score=283.96 Aligned_cols=220 Identities=23% Similarity=0.242 Sum_probs=205.1
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 87 (499)
++.+.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+.. |+.+++++|+++|++++.+ +..|.
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~ 78 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAEN-NHLEAVKYLIKAGALVDPK--DAEGS 78 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHTTTCCCCCC--CTTSC
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHh-CCHHHHHHHHhCCCCCCCC--CCCCC
Confidence 57788999999999999999999999999999999999999999999999998 9999999999999999998 88999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
||||+|+..|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..+
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~ 155 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN--IRDNEENICLH-WAAFSG 155 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHC
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--ccCCCCCCHHH-HHHHCC
Confidence 9999999999999999999999 8999999999999999999999999999999999998 89999999999 999999
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCC
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEG 243 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~ 243 (499)
+.+++++|+++|++++..+..+.++++++........+..++.. +.+++.+|+.|+|||++|+.+..
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSR----------DSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT----------TCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHc----------CCCCCccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999988887666654432 33478899999999999997543
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-36 Score=290.05 Aligned_cols=218 Identities=21% Similarity=0.180 Sum_probs=167.4
Q ss_pred cCccccCCCchHHHHHHHHcC-------------CHHHHHHHHHcCCCCcc-cCCCCChHHHHHHHcCCcHHHHHHHHHc
Q 010851 8 MNQHQQRQSKDELLYQWVIAG-------------DVDAIRALRSQGASLEW-MDKEGKTPLIVACMDSGLINVAKTLIEL 73 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g-------------~~~~v~~Ll~~g~~~~~-~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ 73 (499)
+++|.+|.+|+||||+|+..| +.+++++|+++|++++. .|..|+||||+|+.. |+.+++++|+++
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARY-SRSDAAKRLLEA 79 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHHT-TCHHHHHHHHHT
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHc-CCHHHHHHHHHc
Confidence 468899999999999999977 89999999999999865 489999999999998 999999999999
Q ss_pred CCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccc
Q 010851 74 GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGA-NALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF 152 (499)
Q Consensus 74 ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga-~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 152 (499)
|++++.+ |..|+||||+|+..|+.+++++|++.|+ +++.+|..|.||||+|+..|+.+++++|+++|++++ .+|.
T Consensus 80 g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~d~ 155 (253)
T 1yyh_A 80 SADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN--AVDD 155 (253)
T ss_dssp TCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT--CBCT
T ss_pred CCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC--CcCC
Confidence 9999998 8899999999999999999999999997 899999999999999999999999999999999999 8999
Q ss_pred cCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCc
Q 010851 153 YGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATK 232 (499)
Q Consensus 153 ~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~ 232 (499)
.|+|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+..|+.. +..+++.|..|+
T Consensus 156 ~g~t~L~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~----------ga~~~~~d~~g~ 224 (253)
T 1yyh_A 156 LGKSALH-WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH----------FANRDITDHMDR 224 (253)
T ss_dssp TSCBHHH-HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT----------TCCTTCCCTTCC
T ss_pred CCCCHHH-HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc----------CCCccccccCCC
Confidence 9999999 99999999999999999999999999999999999988887776665543 234778999999
Q ss_pred chhHhHhhC
Q 010851 233 IRYKFASAN 241 (499)
Q Consensus 233 tpl~~a~~~ 241 (499)
||+++|+.+
T Consensus 225 tpl~~A~~~ 233 (253)
T 1yyh_A 225 LPRDIAQER 233 (253)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHHc
Confidence 999999963
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.7e-36 Score=291.80 Aligned_cols=214 Identities=19% Similarity=0.132 Sum_probs=186.3
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGAS---LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 87 (499)
+.+|.+|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--~~~g~ 79 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAIL-GEASTVEKLYAAGAGVLVA--ERGGH 79 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCSSCC--CTTSC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCCC
Confidence 56899999999999999999999999999988 888999999999999998 9999999999999999998 88999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCC-----------------------------------------------CcccCCCCC
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCGAN-----------------------------------------------ALVRNDDCH 120 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~ga~-----------------------------------------------~~~~d~~g~ 120 (499)
||||+|+..|+.+++++|+++|++ ++.+|..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999998765 677889999
Q ss_pred CHHHHHHHcCCHHHHHHHHHcccccccccccc-cCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcccccc
Q 010851 121 TALGVARIKGHINVVRAIESHICYFCGWLREF-YGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV 199 (499)
Q Consensus 121 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~ 199 (499)
||||+|+..|+.++|++|+++|++++ .++. .|+|||| +|+..++.+++++|+++|++++.++..+.++++++....
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~-~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADLN--KPEPTCGRTPLH-LAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCcCHHH-HHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 99999999999999999999999998 6764 5999999 999999999999999999999999999999999999888
Q ss_pred ChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 200 QPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 200 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
....+..|+.. +..++..|..|.|||++|..
T Consensus 237 ~~~~v~~Ll~~----------ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 237 NPILARLLRAH----------GAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHHHHHT----------TCCCCCCC------------
T ss_pred CcHHHHHHHHc----------CCCcCcCCCcccccccccCC
Confidence 87766665543 34488999999999999984
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=7.7e-36 Score=266.84 Aligned_cols=159 Identities=31% Similarity=0.392 Sum_probs=150.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCC
Q 010851 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL 98 (499)
Q Consensus 19 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~ 98 (499)
+.|+.||+.|+.++|++||++|+++|.+|..|+||||+|+.. ++.+++++|+++|++++.+ |..|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~-~~~~~~~~ll~~gad~~~~--d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAEN-GHKEVVKLLISKGADVNAK--DSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHhcccchhhh--ccCCCCHHHHHHHcCC
Confidence 579999999999999999999999999999999999999998 9999999999999999998 8899999999999999
Q ss_pred HHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcC
Q 010851 99 EPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 99 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~g 178 (499)
.++|++|+++|++++.+|.+|+||||+|+..|+.++|++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~--~~d~~G~TpL~-~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN--TSDSDGRTPLD-LAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCCHHH-HHHHcCCHHHHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999 99999999999 999999999999999999
Q ss_pred CCCCC
Q 010851 179 TANPS 183 (499)
Q Consensus 179 a~~~~ 183 (499)
++++.
T Consensus 160 A~ie~ 164 (169)
T 4gpm_A 160 GWLEH 164 (169)
T ss_dssp -----
T ss_pred CCcCC
Confidence 98754
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=288.16 Aligned_cols=224 Identities=19% Similarity=0.159 Sum_probs=201.8
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 87 (499)
-..+.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+
T Consensus 50 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--~~~g~ 126 (285)
T 3d9h_A 50 NPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLG-GHLSCVKILLKHGAQVNGV--TADWH 126 (285)
T ss_dssp CTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHT-TCHHHHHHHHHTTCCSSCC--CTTCC
T ss_pred CcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHC-CcHHHHHHHHHCCCCCCCC--CCCCC
Confidence 34567899999999999999999999999999999999999999999999998 9999999999999999998 88999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCC
Q 010851 88 TPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMS 167 (499)
Q Consensus 88 TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~ 167 (499)
||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~d~~g~t~L~-~A~~~~~ 202 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNID--HKISHLGTPLY-LACENQQ 202 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCCTT--CCBTTTBCHHH-HHHHTTC
T ss_pred CHHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHcCc
Confidence 9999999999999999999999999864 459999999999999999999999999999 89999999999 9999999
Q ss_pred HHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCCCHHH
Q 010851 168 RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQ 247 (499)
Q Consensus 168 ~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~~~~~ 247 (499)
.+++++|+++|++++. +..+.++++++........+..|+.. +.+++.+|..|+|||++|+.+ .+..+
T Consensus 203 ~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~----------gad~~~~d~~g~t~l~~A~~~-~~~~~ 270 (285)
T 3d9h_A 203 RACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDF----------GADTQAKNAEGKRPVELVPPE-SPLAQ 270 (285)
T ss_dssp HHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT----------TCCTTCCCTTSCCGGGGSCTT-SHHHH
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC----------CCCCCCcCCCCCCHHHHhcCc-cHHHH
Confidence 9999999999999985 77889999999988887766665543 334788999999999999953 33444
Q ss_pred HHH
Q 010851 248 LQW 250 (499)
Q Consensus 248 l~~ 250 (499)
++.
T Consensus 271 ~Ll 273 (285)
T 3d9h_A 271 LFL 273 (285)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=285.19 Aligned_cols=209 Identities=20% Similarity=0.179 Sum_probs=186.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLG-GHLSCVKILLKHGAQVNGV--TADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHH
Confidence 689999999999999999999999999999999999999999998 9999999999999999988 8899999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll 175 (499)
.|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID--HKISHLGTPLY-LACENQQRACVKKLL 154 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTTBCHHH-HHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC--cCCCCCCCHHH-HHHHhCCHHHHHHHH
Confidence 9999999999999999875 5569999999999999999999999999998 89999999999 999999999999999
Q ss_pred hcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCC
Q 010851 176 PCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 176 ~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
++|++++. +..+.+++|++........+..++.. +.+++.+|..|+||+++|+.+.
T Consensus 155 ~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~----------gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 155 ESGADVNQ-GKGQDSPLHAVARTASEELACLLMDF----------GADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp HHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHT----------TCCTTCCCTTSCCGGGGSCTTC
T ss_pred HcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHc----------CCCCCCcCCCCCChhhhccccc
Confidence 99999986 66788999988888777666655443 3347889999999999999643
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=282.94 Aligned_cols=222 Identities=16% Similarity=0.131 Sum_probs=196.7
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|.+|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++. +..|
T Consensus 26 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~---~~~g 101 (261)
T 2xai_A 26 GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS-GSWDCVNLLLQHGASVQP---ESDL 101 (261)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCSSC---SCTT
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCC---CCCC
Confidence 567889999999999999999999999999999999999999999999999998 999999999999999986 4569
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ . +..|+|||| +|+..+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~-~~~g~t~Lh-~A~~~~ 177 (261)
T 2xai_A 102 ASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--Q-GKGQDSPLH-AVARTA 177 (261)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--C-CBTTBCHHH-HHHHHT
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--C-CCCCCChHH-HHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999998 3 889999999 999999
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+.+++++|+++|++++.++..++++++++...... +..+........... ...++++|..|+|++|++..
T Consensus 178 ~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~~--~~~ll~~~~~~~l~~--~~~~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 178 SEELACLLMDFGADTQAKNAEGKRPVELVPPESPL--AQLFLEREGPPSLMQ--LCRLRIRKCFGIQQHHKITK 247 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCTH--HHHHHHC-CCCCHHH--HHHHHHHTTSCTTCGGGGGG
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCChhhhccccccH--HHHHHhccCCccHHH--HHHHHHHHHhchhccccCcc
Confidence 99999999999999999999999999999865542 222222211111111 12367889999999999985
No 8
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.9e-35 Score=277.07 Aligned_cols=214 Identities=21% Similarity=0.159 Sum_probs=196.4
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHH----cCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRS----QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~----~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+|.+|+||||+|+..|+.++|++|++ .|.+++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g 79 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT-TLPSVVRLLVTAGASPMAL--DRHG 79 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTS
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHc-CCHHHHHHHHHcCCCcccc--CCCC
Confidence 5689999999999999999999999997 7899999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCC----CCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc-ccCCCHHHHH
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGA----NALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEAL 161 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~Lh~~ 161 (499)
+||||+|+..|+.+++++|++.++ +++..|..|.||||+|+..|+.+++++|+++|++++ .++ ..|.|||| +
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~~g~t~L~-~ 156 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID--AVDIKSGRSPLI-H 156 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTTCCCHHH-H
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc--cccccCCCcHHH-H
Confidence 999999999999999999999987 889999999999999999999999999999999998 777 88999999 9
Q ss_pred hhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 162 APQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 162 A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
|+..++.+++++|+++|++++.++..+.++++++........+..++.. +.+++.+|..|+|||++|+.
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------ga~~~~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS----------GADSSLKNCHNDTPLMVARS 225 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT----------TCCTTCCCTTSCCTTTTCSS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc----------CCCCCCcCCCCCCHHHHHHh
Confidence 9999999999999999999999999999999999988887776665543 33477899999999999996
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.4e-35 Score=294.12 Aligned_cols=220 Identities=15% Similarity=0.104 Sum_probs=196.7
Q ss_pred cccccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCC
Q 010851 4 SLNSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPG 83 (499)
Q Consensus 4 ~l~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d 83 (499)
++.+++.+.+|.+|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++ +
T Consensus 7 ~~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~----~ 81 (364)
T 3ljn_A 7 DFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKF-GCVDTAKYLASVGEVHS----L 81 (364)
T ss_dssp ---------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH-CCHHHHHHHHHHCCCCC----C
T ss_pred hccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHc-CCHHHHHHHHHCCCCcc----c
Confidence 456788899999999999999999999999999999999999999999999999998 99999999999999777 4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC----CCCCcc-----------------cCCCCCCHHHHHHHcC--CHHHHHHHHH
Q 010851 84 GRGGTPLHHAAKRGLEPTVRLLLSC----GANALV-----------------RNDDCHTALGVARIKG--HINVVRAIES 140 (499)
Q Consensus 84 ~~g~TpL~~A~~~g~~~~v~~Ll~~----ga~~~~-----------------~d~~g~tpL~~A~~~g--~~~~v~~Ll~ 140 (499)
..|.||||+|+..|+.++|++|++. |++++. .|..|.||||+|+..| +.++|++|++
T Consensus 82 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 82 WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 5799999999999999999999999 888877 8899999999999999 9999999999
Q ss_pred cccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCC-----CCCCCcccccccCccccccChHHHHHHHHhhcCCC
Q 010851 141 HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA-----NPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEP 215 (499)
Q Consensus 141 ~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~-----~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 215 (499)
+|++++ .+|..|+|||| +|+..++.+++++|+++|++ ++..+..+.++++++...+....+..|+..
T Consensus 162 ~ga~~~--~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----- 233 (364)
T 3ljn_A 162 LGASPT--AKDKADETPLM-RAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM----- 233 (364)
T ss_dssp HTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT-----
T ss_pred cCCCCc--ccCCCCCCHHH-HHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-----
Confidence 999999 99999999999 99999999999999999999 999999999999999998887777665532
Q ss_pred ccCCCCCceeeecCCCcchhHhHhhC
Q 010851 216 KFHQPDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 216 ~~~~~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
+.+++..|..|+|||++|+..
T Consensus 234 -----gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 234 -----GIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHT
T ss_pred -----CCCCCCCCCCCCCHHHHHHHh
Confidence 344788999999999999964
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.2e-34 Score=268.54 Aligned_cols=211 Identities=18% Similarity=0.123 Sum_probs=190.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccC-CCCCCCcHHHHHH
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGASLEW-MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR-PGGRGGTPLHHAA 94 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~-~d~~g~TpL~~A~ 94 (499)
|+||||+|+..|+.++|++|++++.++.. +|..|+||||+|+.. |+.+++++|+++|++++... ++..|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSF-QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHc-CCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 78999999999999999999999987654 889999999999998 99999999999995554433 3889999999999
Q ss_pred HcCCHHHHHHHHHCC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 95 KRGLEPTVRLLLSCG--ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 95 ~~g~~~~v~~Ll~~g--a~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
..|+.+++++|+++| ++++..|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.++++
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~ 157 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR--IKDKFNQIPLH-RAASVGSLKLIE 157 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC--CCCTTSCCHHH-HHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc--ccCCCCCCHHH-HHHHcCCHHHHH
Confidence 999999999999999 8999999999999999999999999999999999999 89999999999 999999999999
Q ss_pred HHHhcC-CCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 173 VVIPCG-TANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 173 ~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+|+++| ++++.++..+.++++++........+..++... +.+++..|..|+||+++|..
T Consensus 158 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~---------ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY---------GAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH---------CCCSCCBCTTSCBGGGGCSS
T ss_pred HHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---------CCCCCccCCCCCcHHHHHHH
Confidence 999999 999999999999999999988887777766222 33478899999999999986
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=282.75 Aligned_cols=217 Identities=21% Similarity=0.199 Sum_probs=170.8
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCC--------CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccC
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGAS--------LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR 81 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--------~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~ 81 (499)
...+|..+.++|+.|+..|+.++|++||++|++ ++..|..|.||||+|+..++...++++|++.|+++|.+
T Consensus 4 e~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~- 82 (269)
T 4b93_B 4 ETKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVT- 82 (269)
T ss_dssp ---CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCC-
T ss_pred ccccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCc-
Confidence 345788899999999999999999999998865 46677889999999998744456899999999999998
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHH
Q 010851 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL 161 (499)
Q Consensus 82 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~ 161 (499)
|.+|+||||+|+..|+.++|++|++.|++++.++..|.||||+|+..++.+++++|+++|++++ .+|..|+|||| +
T Consensus 83 -d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n--~~d~~g~TpL~-~ 158 (269)
T 4b93_B 83 -SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN--KKDLSGNTPLI-Y 158 (269)
T ss_dssp -CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC--CCCTTCCCHHH-H
T ss_pred -CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCC--CCCCCCCCHHH-H
Confidence 8899999999999999999999999999999999999999999999999999999999999999 89999999999 9
Q ss_pred hhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhC
Q 010851 162 APQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 162 A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
|+..|+.+++++|+++|++++.++..+.+++|++...+....+..|+.. +++++++|+.|+||||+|+.+
T Consensus 159 A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----------Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 159 ACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLH----------GASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT----------TCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC----------CCCCCCcCCCCCCHHHHHHhC
Confidence 9999999999999999999999999999999999998887777665543 344888999999999999864
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.9e-34 Score=274.69 Aligned_cols=221 Identities=21% Similarity=0.184 Sum_probs=192.2
Q ss_pred ccCcccc-CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQ-RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~-d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+.+.+.+ +..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.. |..
T Consensus 28 g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~ 104 (285)
T 1wdy_A 28 GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA-GSVKLLKLFLSKGADVNEC--DFY 104 (285)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCTTCB--CTT
T ss_pred CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--Ccc
Confidence 3455555 77889999999999999999999999999999999999999999988 8899999999999999988 888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCccc----------CCCCCCHHHHHHHcCCHHHHHHHHHc-ccccccccccccC
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVR----------NDDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYG 154 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~----------d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g 154 (499)
|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++ |++++ .+|..|
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g 182 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN--ACDNMG 182 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTT--CCCTTS
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCC--ccCCCC
Confidence 999999999999999999999999998877 77899999999999999999999987 88888 889999
Q ss_pred CCHHHHHhhhcCC----HHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCC
Q 010851 155 PSFLEALAPQLMS----RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQA 230 (499)
Q Consensus 155 ~t~Lh~~A~~~~~----~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~ 230 (499)
+|||| +|+..++ .+++++|+++|++++.++..+.++++++........+..++... +..++..|..
T Consensus 183 ~t~l~-~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~---------g~~~~~~~~~ 252 (285)
T 1wdy_A 183 RNALI-HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE---------HIEINDTDSD 252 (285)
T ss_dssp CCHHH-HHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSS---------SCCTTCCCTT
T ss_pred CCHHH-HHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcc---------CCCccccCCC
Confidence 99999 8888888 88999999999999999888999999988888877766655421 3347788999
Q ss_pred CcchhHhHhhCC
Q 010851 231 TKIRYKFASANE 242 (499)
Q Consensus 231 g~tpl~~a~~~~ 242 (499)
|+|||++|+...
T Consensus 253 g~t~l~~A~~~~ 264 (285)
T 1wdy_A 253 GKTALLLAVELK 264 (285)
T ss_dssp SCCHHHHHHHTT
T ss_pred CCcHHHHHHHcC
Confidence 999999999643
No 13
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.4e-34 Score=284.80 Aligned_cols=218 Identities=21% Similarity=0.147 Sum_probs=200.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.. |..|
T Consensus 48 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~--~~~g 124 (351)
T 3utm_A 48 NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY-GHYEVTELLLKHGACVNAM--DLWQ 124 (351)
T ss_dssp TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTC
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCC
Confidence 567788999999999999999999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccC--------------------------------------------------
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRN-------------------------------------------------- 116 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d-------------------------------------------------- 116 (499)
+||||+|+..|+.+++++|+++|++++..+
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 999999999999999999999999987654
Q ss_pred ----CCCCCHHHHHHHc---CCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccc
Q 010851 117 ----DDCHTALGVARIK---GHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFE 189 (499)
Q Consensus 117 ----~~g~tpL~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 189 (499)
..|.||||+|+.. +..+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~ 281 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN--EKNKDFMTPLH-VAAERAHNDVMEVLHKHGAKMNALDSLGQ 281 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT--CCCTTCCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC--CcCCCCCCHHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 5577999999999 55899999999999999 89999999999 99999999999999999999999999999
Q ss_pred cccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 190 LVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 190 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
++++++........+..|+.. +.++++.|..|+||+++|.+
T Consensus 282 t~L~~A~~~~~~~~v~~Ll~~----------gad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 282 TALHRAALAGHLQTCRLLLSY----------GSDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------TCCTTCCCTTSCCHHHHSCH
T ss_pred CHHHHHHHcCcHHHHHHHHHc----------CCCCCCcCCCCCChhhhhhH
Confidence 999999988887777665543 33477899999999999964
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.1e-33 Score=265.72 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=191.2
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGA-SLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
+..+.++||+|+..|+.+.|++|++.+. .++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~ 79 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSA-GHTEIVEFLLQLGVPVNDK--DDAGWSPLHI 79 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCSCCC--CTTSCCHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHc-CcHHHHHHHHHhCCCCCCc--CCCCCCHHHH
Confidence 3467899999999999999999998764 4677889999999999998 9999999999999999988 8899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..++.++++
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~ 156 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD--AKDHYDATAMH-RAAAKGNLKMVH 156 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHTCHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCcHHH-HHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 88999999999 999999999999
Q ss_pred HHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 173 VVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 173 ~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+|+++|++++.++..+.++++++........+..++.. +.++++.|..|+||+++|..
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ----------GASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT----------TCCSCCCCTTSCCHHHHSCH
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC----------CCCCCCCCCCCCCHHHHHHh
Confidence 99999999999999999999999888887666655433 33478899999999999985
No 15
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.7e-33 Score=260.54 Aligned_cols=199 Identities=19% Similarity=0.090 Sum_probs=186.0
Q ss_pred ccCccc-cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCC-CCCccCCCC
Q 010851 7 SMNQHQ-QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGA-NINAYRPGG 84 (499)
Q Consensus 7 ~~~~~~-~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga-~~~~~~~d~ 84 (499)
+.+.+. .|.+|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++++ +++.. +.
T Consensus 14 g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~--~~ 90 (223)
T 2f8y_A 14 GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSA-DAQGVFQILIRNRATDLDAR--MH 90 (223)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHBTTSCTTCC--CT
T ss_pred CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CC
Confidence 344544 488999999999999999999999999999999999999999999998 99999999999987 88887 88
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 85 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
.|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+.
T Consensus 91 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~ 167 (223)
T 2f8y_A 91 DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD--MQNNREETPLF-LAAR 167 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHH-HHHH
T ss_pred CCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCcCHHH-HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 89999999999 9999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhh
Q 010851 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAK 211 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 211 (499)
.++.+++++|+++|++++.++..+.++++++........+..+.+..
T Consensus 168 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 168 EGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 99999999999999999999999999999999888877776666443
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-33 Score=269.60 Aligned_cols=191 Identities=20% Similarity=0.088 Sum_probs=181.6
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCC-CCCccCCCCCCCcHH
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGA-NINAYRPGGRGGTPL 90 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga-~~~~~~~d~~g~TpL 90 (499)
..|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|+ +++.+ +..|.|||
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~--~~~g~t~L 128 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSA-DAQGVFQILIRNRATDLDAR--MHDGTTPL 128 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHSTTSCTTCC--CTTCCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCcccc--CCCCCcHH
Confidence 3589999999999999999999999999999999999999999999998 99999999999997 89988 88999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHH
Q 010851 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKI 170 (499)
Q Consensus 91 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~ 170 (499)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.++
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~tpL~-~A~~~~~~~~ 205 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD--MQNNREETPLF-LAAREGSYET 205 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHTCHHH
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999 9999999999
Q ss_pred HHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 171 WVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 171 ~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
+++|+++|++++.++..++++++++...+....+..+.
T Consensus 206 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 206 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999998888866655543
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.6e-33 Score=263.04 Aligned_cols=187 Identities=22% Similarity=0.200 Sum_probs=178.7
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|.||
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~ 109 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA-GXDEIVKALLVKGAHVNAV--NQNGCTP 109 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc-CHHHHHHHHHHcCCCCCCC--CCCCCCH
Confidence 567799999999999999999999999999999999999999999999998 9999999999999999998 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHH
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRK 169 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~ 169 (499)
||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~ 186 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN--IQDTEGNTPLH-LACDEERVE 186 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC--CCCTTSCCHHH-HHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc--ccCCCCCCHHH-HHHHCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999 89999999999 999999999
Q ss_pred HHHHHHhcCCCCCCCCcccccccCccccccChH
Q 010851 170 IWVVVIPCGTANPSKPLRFELVIYPSLQDVQPR 202 (499)
Q Consensus 170 ~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~ 202 (499)
++++|+++|++++.++..+.++++++.......
T Consensus 187 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 187 EAKFLVTQGASIYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHH
Confidence 999999999999999999999999987654433
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-34 Score=288.33 Aligned_cols=225 Identities=16% Similarity=0.139 Sum_probs=202.1
Q ss_pred cccccCccccC-CCchHHHHHHHHcCCHHHHHHHH--------HcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcC
Q 010851 4 SLNSMNQHQQR-QSKDELLYQWVIAGDVDAIRALR--------SQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELG 74 (499)
Q Consensus 4 ~l~~~~~~~~d-~~g~t~L~~Aa~~g~~~~v~~Ll--------~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~g 74 (499)
.|...+.+.+| ..|+||||+|+..|+.++|++|+ ++|+++|.+|..|.||||+|+.. |+.+++++|+++|
T Consensus 111 ~L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~-g~~~iv~~Ll~~g 189 (373)
T 2fo1_E 111 PITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLA-RRRRLVAYLMKAG 189 (373)
T ss_dssp CCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTT
T ss_pred HhccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHc-ChHHHHHHHHHCC
Confidence 34456778888 78999999999999998887776 79999999999999999999998 9999999999999
Q ss_pred CCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCcccCCCCCCHHHHHHHcC---CHHHHHHHHHccccccc-
Q 010851 75 ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG---ANALVRNDDCHTALGVARIKG---HINVVRAIESHICYFCG- 147 (499)
Q Consensus 75 a~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~g~~~~~- 147 (499)
++++.+ |..|.||||+|+..|+.+++++|+++| ++++..|..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 190 a~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~ 267 (373)
T 2fo1_E 190 ADPTIY--NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 267 (373)
T ss_dssp CCSCCC--CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC
T ss_pred CCCccc--CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccc
Confidence 999998 889999999999999999999999998 899999999999999999998 89999999999999871
Q ss_pred -----ccccccCCCHHHHHhhhcCCHHHHHHHHhcC-CCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCC
Q 010851 148 -----WLREFYGPSFLEALAPQLMSRKIWVVVIPCG-TANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPD 221 (499)
Q Consensus 148 -----~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 221 (499)
..+|..|+|||| +|+..++.+++++|++++ ++++.++..+.++++++...+....+..|+.. +
T Consensus 268 ~~~~~~~~d~~g~t~Lh-~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~----------g 336 (373)
T 2fo1_E 268 GAARKDSEKYKGRTALH-YAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ----------G 336 (373)
T ss_dssp SGGGTSSSSCCCCCTHH-HHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT----------T
T ss_pred cccccCcccccCCCHHH-HHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc----------C
Confidence 125779999999 999999999999999886 99999999999999999988887777665543 3
Q ss_pred CceeeecCCCcchhHhHhhCC
Q 010851 222 PSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 222 ~~~~~~d~~g~tpl~~a~~~~ 242 (499)
..++..|..|+|||++|+.+.
T Consensus 337 ad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 337 ASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp CCSSCCCSSSCCHHHHHHHTT
T ss_pred CCccCCCCCCCCHHHHHHHcC
Confidence 448889999999999999743
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.4e-33 Score=272.70 Aligned_cols=185 Identities=21% Similarity=0.139 Sum_probs=162.7
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCC-------------
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN------------- 76 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~------------- 76 (499)
.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRV-RAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTT-TCHHHHHHHSSSCCSSCCCC--------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 678899999999999999999999999999999999999999999999987 999999999998866
Q ss_pred ----------------------------------CCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCC-CCC
Q 010851 77 ----------------------------------INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDD-CHT 121 (499)
Q Consensus 77 ----------------------------------~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~t 121 (499)
++.+ +..|+||||+|+..|+.++|++|+++|++++.++.. |+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t 194 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE--NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT 194 (282)
T ss_dssp ---------------------------CCCGGGGTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc--CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 5555 789999999999999999999999999999999854 999
Q ss_pred HHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccC
Q 010851 122 ALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (499)
Q Consensus 122 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~ 200 (499)
|||+|+..|+.++|++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.+++.++..+..
T Consensus 195 pL~~A~~~~~~~~v~~Ll~~gad~~--~~d~~g~tpL~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 195 PLHLAVEAQAASVLELLLKAGADPT--ARMYGGRTPLG-SALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCc--ccccCCCCHHH-HHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 9999999999999999999999999 99999999999 9999999999999999999999999999999888775554
No 20
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-33 Score=288.69 Aligned_cols=218 Identities=22% Similarity=0.160 Sum_probs=181.2
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+..++.|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+.. |+.+++++|+++|++++.+ +..|
T Consensus 4 g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g 80 (437)
T 1n11_A 4 GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARA-GHTEVAKYLLQNKAKVNAK--AKDD 80 (437)
T ss_dssp -----------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHH-TCHHHHHHHHHHTCCSSCC--CTTS
T ss_pred CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCCCCC--CCCC
Confidence 567788899999999999999999999999999999999999999999999998 9999999999999999988 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++++++.+ ..+..|.|||| +|+..+
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~-~A~~~g 157 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA--CMTKKGFTPLH-VAAKYG 157 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC--CCCTTSCCHHH-HHHHTT
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc--CCCCCCCCHHH-HHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999887 78889999999 899999
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
+.+++++|+++|++++..+..+.++++.+........+..++... ..++..+..|.|||++|+.
T Consensus 158 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------~~~~~~~~~g~t~L~~A~~ 221 (437)
T 1n11_A 158 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG----------GSPHSPAWNGYTPLHIAAK 221 (437)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGT----------CCSCCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC----------CCCCCcCCCCCCHHHHHHH
Confidence 999999999999999988888888888888777766555544221 1234455566666666664
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-34 Score=273.23 Aligned_cols=216 Identities=20% Similarity=0.208 Sum_probs=187.2
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGA----SLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~----~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+|.+|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g 78 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT-NQPEIAEALLGAGCDPELR--DFRG 78 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHT-TCHHHHHCCCSCCCCSCCC--CTTC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCc--CCCC
Confidence 5679999999999999999999999998765 7899999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccc-cCCCHHH
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGAN------ALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF-YGPSFLE 159 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~Lh 159 (499)
+||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++ .++. .|+||||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~ 156 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN--AQEPCNGRTALH 156 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCCHHH
Confidence 9999999999999999999999876 56788899999999999999999999999999999 8887 9999999
Q ss_pred HHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHh
Q 010851 160 ALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (499)
Q Consensus 160 ~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~ 239 (499)
+|+..++.+++++|+++|++++.++..+.++++++........+..|+... .++...+.+..|.|+++.+.
T Consensus 157 -~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g--------a~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 157 -LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT--------LENLQMLPESEDEESYDTES 227 (236)
T ss_dssp -HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS--------CGGGSSCCCCCTTTCCCCC-
T ss_pred -HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcc--------hhhhhcCCccchHHHHhhhc
Confidence 999999999999999999999999999999999999988877666655332 23334567888888888776
Q ss_pred h
Q 010851 240 A 240 (499)
Q Consensus 240 ~ 240 (499)
+
T Consensus 228 ~ 228 (236)
T 1ikn_D 228 E 228 (236)
T ss_dssp -
T ss_pred c
Confidence 4
No 22
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.6e-33 Score=275.90 Aligned_cols=216 Identities=21% Similarity=0.168 Sum_probs=182.3
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccC-----------
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYR----------- 81 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~----------- 81 (499)
+.+|.|+||.|++.|++++|++||++|+++|.++. .|+||||+||.. |+.++|++||++|++++.++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~-g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQM-SREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHc-CCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 44689999999999999999999999999999876 499999999998 99999999999998776542
Q ss_pred --------------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccc----------CCCCCCHHHHHHHcCC
Q 010851 82 --------------------PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR----------NDDCHTALGVARIKGH 131 (499)
Q Consensus 82 --------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~----------d~~g~tpL~~A~~~g~ 131 (499)
.|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 2567899999999999999999999999987654 4568999999999999
Q ss_pred HHHHHHHHH-cccccccccccccCCCHHHHHhhhcC----CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHH
Q 010851 132 INVVRAIES-HICYFCGWLREFYGPSFLEALAPQLM----SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIA 206 (499)
Q Consensus 132 ~~~v~~Ll~-~g~~~~~~~~~~~g~t~Lh~~A~~~~----~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~ 206 (499)
.++|++|++ .|++++ .+|..|+|+|| .++..+ ...++++|+++|++++.++..+.+++|.+........+..
T Consensus 181 ~~~v~~LL~~~gad~n--~~d~~g~t~l~-~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 181 VEVLKILLDEMGADVN--ACDNMGRNALI-HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp HHHHHHHHHHSCCCTT--CCCTTSCCHHH-HHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhccCCCcC--ccCCCCCcHHH-HHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 999999996 589998 89999999998 443322 2468899999999999999999999999888888776665
Q ss_pred HHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCC
Q 010851 207 LWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
+... .+..++.+|..|+||||+|+...
T Consensus 258 Ll~~---------~~~~vn~~d~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 258 LLEQ---------EHIEINDTDSDGKTALLLAVELK 284 (337)
T ss_dssp HHTS---------TTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHh---------cCCcccCcCCCCCCHHHHHHHcC
Confidence 4432 23448889999999999999643
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.3e-33 Score=261.44 Aligned_cols=197 Identities=21% Similarity=0.229 Sum_probs=187.3
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcC-CCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~g-a~~~~~~~d~~ 85 (499)
+.+.+..|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++| .+++.. +..
T Consensus 34 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~~~~~~~~~--~~~ 110 (237)
T 3b7b_A 34 GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK-GHYEVVQYLLSNGQMDVNCQ--DDG 110 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT-TCHHHHHHHHTTTCCCTTCC--CTT
T ss_pred CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCcccC--CCC
Confidence 567788899999999999999999999999999999999999999999999998 9999999999999 899988 889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..
T Consensus 111 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~ 187 (237)
T 3b7b_A 111 GWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH--AVNIHGDSPLH-IAARE 187 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT--CCCTTCCCHHH-HHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999 89999999999 99999
Q ss_pred CCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHH
Q 010851 166 MSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWK 209 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 209 (499)
++.+++++|+++|++++.++..+.++++++........++.+.+
T Consensus 188 ~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 188 NRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888766666553
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.9e-33 Score=262.59 Aligned_cols=193 Identities=20% Similarity=0.168 Sum_probs=182.5
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCC----CCCccC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGA----NINAYR 81 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga----~~~~~~ 81 (499)
.+.+.+.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. |+.+++++|+++++ +++..
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~~~~~~~~~~~~- 112 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH-RSPTCLRALLDSAAPGTLDLEAR- 112 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHSCTTSCCTTCC-
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccccccc-
Confidence 3578888999999999999999999999999999999999999999999999998 99999999999998 78877
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHH
Q 010851 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEA 160 (499)
Q Consensus 82 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~ 160 (499)
|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||
T Consensus 113 -~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~- 188 (241)
T 1k1a_A 113 -NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN--AQMYSGSSALH- 188 (241)
T ss_dssp -CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CBCTTSCBHHH-
T ss_pred -CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-
Confidence 8899999999999999999999999999999998 889999999999999999999999999999 89999999999
Q ss_pred HhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHH
Q 010851 161 LAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAV 204 (499)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~ 204 (499)
+|+..++.+++++|+++|++++.++..+.++++++........+
T Consensus 189 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 189 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHH
Confidence 99999999999999999999999999999999999876664433
No 25
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.4e-33 Score=285.86 Aligned_cols=221 Identities=23% Similarity=0.187 Sum_probs=184.5
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|+++|++++.. +..|
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g 245 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQ-NQVEVARSLLQYGGSANAE--SVQG 245 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCC
Confidence 355667777888888888888888888888888888888788888888888876 8888888888888888877 7788
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++ .++..|+|||| +|+..+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~g 322 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD--ATTRMGYTPLH-VASHYG 322 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT--CCCSSCCCHHH-HHHHSS
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC--CCCCCCCCHHH-HHHHcC
Confidence 888888888888888888888888888888888889999888888899999998888888 88888999999 888899
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCC
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEG 243 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~ 243 (499)
+.+++++|+++|++++.++..+.++++++...+....+..|++. +.+++..|..|+|||++|.....
T Consensus 323 ~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~----------ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 323 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN----------GASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT----------TCCSCCCCSSSCCHHHHHHHTTC
T ss_pred cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC----------cCCCCCCCCCCCCHHHHHHHcCc
Confidence 99999999999999988888888888888888877666655443 33478899999999999997443
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=271.32 Aligned_cols=185 Identities=19% Similarity=0.177 Sum_probs=151.3
Q ss_pred ccccCCCchHHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 10 QHQQRQSKDELLYQWVIAGDV-DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~-~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
.+..|..|.||||+|+..++. .++++|+++|+++|.+|.+|+||||+|+.. |+.+++++|++.|++++.+ +..|.|
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~-g~~~~v~~Ll~~~a~~~~~--~~~g~t 121 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALH-GRADLIPLLLKHGANAGAR--NADQAV 121 (269)
T ss_dssp ------------------------------CCCCTTCCCTTSCCHHHHHHHT-TCTTHHHHHHHTTCCTTCC--CTTCCC
T ss_pred ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHhcCCCcCcc--CCCCCC
Confidence 566788999999999988876 488999999999999999999999999998 9999999999999999998 889999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCH
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSR 168 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~ 168 (499)
|||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++ .++..|+|||| +|+..|+.
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn--~~~~~g~t~Lh-~A~~~g~~ 198 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN--ASNNKGNTALH-EAVIEKHV 198 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT--CBCTTSCBHHH-HHHHTTCH
T ss_pred ccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC--ccccCCCcHHH-HHHHcCCH
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999 99999999
Q ss_pred HHHHHHHhcCCCCCCCCcccccccCccccccC
Q 010851 169 KIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (499)
Q Consensus 169 ~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~ 200 (499)
+++++|+++|++++.++..++++++++.+...
T Consensus 199 ~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 199 FVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999999999999976543
No 27
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-32 Score=265.72 Aligned_cols=221 Identities=20% Similarity=0.167 Sum_probs=194.7
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 15 QSKDELLYQWVIAGDVDAIRALRSQGASLEWM-DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~-d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
.+|.|+||+|+..|+.++|++|+++|++++.. +..|+||||+|+.. |+.+++++|+++|++++.+ |..|.||||+|
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A 79 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQM-SREDIVELLLRHGADPVLR--KKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCccc--CCCCCCHHHHH
Confidence 36899999999999999999999999999988 78899999999998 9999999999999999998 88999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccc----------cccCCCHHHHHhh
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLR----------EFYGPSFLEALAP 163 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~~~g~t~Lh~~A~ 163 (499)
+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++ .+ +..|.|||| +|+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~~~~~~~~~~~g~t~L~-~A~ 156 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN--LRRKTKEDQERLRKGGATALM-DAA 156 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT--CCCCCCHHHHHTTCCCCCHHH-HHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc--cccccHHHHHhhccCCCcHHH-HHH
Confidence 99999999999999999999999999999999999999999999999999988 55 788999999 999
Q ss_pred hcCCHHHHHHHHhc-CCCCCCCCcccccccCccccccCh----HHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhH
Q 010851 164 QLMSRKIWVVVIPC-GTANPSKPLRFELVIYPSLQDVQP----RAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFA 238 (499)
Q Consensus 164 ~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a 238 (499)
..++.+++++|+++ |++++..+..+.++++.+...... ..+..+... +..++..|..|+||||+|
T Consensus 157 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~----------g~~~~~~~~~g~t~L~~A 226 (285)
T 1wdy_A 157 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH----------GADVNVRGERGKTPLILA 226 (285)
T ss_dssp HHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT----------TCCSSCCCTTSCCHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc----------CCCCCCcCCCCCcHHHHH
Confidence 99999999999998 999999999999999988876663 222222221 344788999999999999
Q ss_pred hhCCCCHHHHHHHH
Q 010851 239 SANEGDKHQLQWLD 252 (499)
Q Consensus 239 ~~~~~~~~~l~~~~ 252 (499)
+... ....+..+.
T Consensus 227 ~~~~-~~~~v~~Ll 239 (285)
T 1wdy_A 227 VEKK-HLGLVQRLL 239 (285)
T ss_dssp HHTT-CHHHHHHHH
T ss_pred HHcC-CHHHHHHHH
Confidence 9743 333344444
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.9e-32 Score=255.18 Aligned_cols=182 Identities=19% Similarity=0.126 Sum_probs=172.6
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcC--CCCcc-cCCCCChHHHHHHHcCCcHHHHHHHHHcC--CCCCccCCCCCC
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQG--ASLEW-MDKEGKTPLIVACMDSGLINVAKTLIELG--ANINAYRPGGRG 86 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~-~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~g--a~~~~~~~d~~g 86 (499)
.+|..|.||||+|+..|+.+++++|+++| .+++. .|..|+||||+|+.. |+.+++++|+++| ++++.+ +..|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~~--~~~g 107 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV-GNLEVVKSLYDRPLKPDLNKI--TNQG 107 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH-CCHHHHHHHHSSSSCCCTTCC--CTTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCcccccC--CcCC
Confidence 47899999999999999999999999999 66666 788999999999998 9999999999999 888887 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc-cccccccccccCCCHHHHHhhhc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI-CYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++ .+|..|+|||| +|+..
T Consensus 108 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~d~~g~t~L~-~A~~~ 184 (228)
T 2dzn_A 108 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN--WQDKQGWTPLF-HALAE 184 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC--CCCTTSCCHHH-HHHHT
T ss_pred CCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc--CcCCCCCCHHH-HHHHc
Confidence 99999999999999999999999999999999999999999999999999999999 8998 89999999999 99999
Q ss_pred CCHHHHHHHH-hcCCCCCCCCcccccccCcccccc
Q 010851 166 MSRKIWVVVI-PCGTANPSKPLRFELVIYPSLQDV 199 (499)
Q Consensus 166 ~~~~~~~~Ll-~~ga~~~~~~~~~~~~l~~~~~~~ 199 (499)
++.+++++|+ ++|++++.++..+.++++++.+..
T Consensus 185 ~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 185 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTT
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHH
Confidence 9999999999 999999999999999999987654
No 29
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-32 Score=258.34 Aligned_cols=189 Identities=18% Similarity=0.113 Sum_probs=173.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCC-----CccCCCCCCCcH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANI-----NAYRPGGRGGTP 89 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~-----~~~~~d~~g~Tp 89 (499)
.|+||||+|+..|+.++|++|+++ |++++.+|..|+||||+|+.. |+.+++++|+++|+++ +.+ |..|+||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~--~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALY-DNLEAAMVLMEAAPELVFEPMTSE--LYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCGGGGGCCCCST--TTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHc-CCHHHHHHHHHcCchhcccccccc--CCCCcCH
Confidence 589999999999999999999997 999999999999999999998 9999999999999987 545 7789999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCC-------------CCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCC
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRND-------------DCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPS 156 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-------------~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t 156 (499)
||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++ .+|..|+|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~t 156 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR--AQDSLGNT 156 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCC
Confidence 9999999999999999999999988765 79999999999999999999999999999 89999999
Q ss_pred HHHHHhhhcCCHHHH----HHHHhcCCCC------CCCCcccccccCccccccChHHHHHHHHh
Q 010851 157 FLEALAPQLMSRKIW----VVVIPCGTAN------PSKPLRFELVIYPSLQDVQPRAVIALWKA 210 (499)
Q Consensus 157 ~Lh~~A~~~~~~~~~----~~Ll~~ga~~------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 210 (499)
||| +|+..++.+++ ++|+++|++. +.++..+.++++++...+....+..|++.
T Consensus 157 ~L~-~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 157 VLH-ILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHH-HHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHH-HHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 999 99999999988 9999999988 47788899999999988888777776633
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=265.48 Aligned_cols=184 Identities=18% Similarity=0.189 Sum_probs=176.2
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|.+|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.. ..|
T Consensus 82 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~---~~g 157 (285)
T 3d9h_A 82 GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS-GSWDCVNLLLQHGASVQPE---SDL 157 (285)
T ss_dssp TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCSSCS---CTT
T ss_pred CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CHHHHHHHHHHCCCCCCCC---CCC
Confidence 467888999999999999999999999999999999999999999999999998 9999999999999999864 469
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ . +..|+|||| +|+..+
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~-~~~g~t~L~-~A~~~~ 233 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--Q-GKGQDSPLH-AVVRTA 233 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--C-CBTTBCHHH-HHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--C-CCCCCCHHH-HHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999998 3 889999999 999999
Q ss_pred CHHHHHHHHhcCCCCCCCCcccccccCccccc
Q 010851 167 SRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 198 (499)
+.+++++|+++|++++.++..++++++++...
T Consensus 234 ~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 234 SEELACLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 99999999999999999999999999999844
No 31
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.1e-33 Score=270.97 Aligned_cols=214 Identities=20% Similarity=0.201 Sum_probs=192.7
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
.+.+|.|+||+|+..|+.++|++|+++|+++|..|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~ 112 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID-DNVDMVKFLVENGANINQP--DNEGWIPLHA 112 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCCC--CCCCCcHHHH
Confidence 456789999999999999999999999999999999999999999998 9999999999999999998 8899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-cccccc------------------------
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH-ICYFCG------------------------ 147 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~------------------------ 147 (499)
|+..|+.++|++|+++|++++..|..|.||||+|+..++.++++.|+.. +.+++.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 9999999999999999999999999999999999999999999887754 333320
Q ss_pred ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeee
Q 010851 148 WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIY 227 (499)
Q Consensus 148 ~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 227 (499)
...+..|.|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+..|+.. +.+++++
T Consensus 193 ~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~----------gad~~~~ 261 (299)
T 1s70_B 193 VRHAKSGGTALH-VAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN----------LCDMEAV 261 (299)
T ss_dssp CCCTTTCCCHHH-HHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT----------TCCTTCC
T ss_pred hhhcCCCCCHHH-HHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc----------CCCCCCc
Confidence 134678999999 99999999999999999999999999999999999998888777665543 2347889
Q ss_pred cCCCcchhHhHhh
Q 010851 228 DQATKIRYKFASA 240 (499)
Q Consensus 228 d~~g~tpl~~a~~ 240 (499)
|..|+|||++|.+
T Consensus 262 d~~g~t~l~~A~~ 274 (299)
T 1s70_B 262 NKVGQTAFDVADE 274 (299)
T ss_dssp CTTSCCTTTSCCS
T ss_pred CCCCCCHHHHHHH
Confidence 9999999999975
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=256.66 Aligned_cols=227 Identities=17% Similarity=0.136 Sum_probs=200.7
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.+..|..|.|+||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++... +..|.||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~-~~~~~t~ 79 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAIN-NRIDLVKYYISKGAIVDQLG-GDLNSTP 79 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCB-TTTTBCH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHh-CCHHHHHHHHHcCCcchhhc-CCcCCCh
Confidence 355688999999999999999999999999999999999999999999998 99999999999999998763 5569999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC-CH
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM-SR 168 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~-~~ 168 (499)
||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..+ ..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~g~t~l~-~a~~~~~~~ 156 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD--MMDQNGMTPLM-WAAYRTHSV 156 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHCCSS
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc--ccCCCCCcHHH-HHHHhCChH
Confidence 999999999999999999999999999999999999999999999999999999998 89999999999 777554 58
Q ss_pred HHHHHHHhcCCCCCCCCc-ccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCCCCHHH
Q 010851 169 KIWVVVIPCGTANPSKPL-RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEGDKHQ 247 (499)
Q Consensus 169 ~~~~~Ll~~ga~~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~~~~~~ 247 (499)
+++++|++.|++.+..+. .+.++++.+........+..+... +..++..|..|+|||++|+... ....
T Consensus 157 ~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------g~~~~~~~~~g~t~l~~A~~~~-~~~~ 225 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA----------GANVDAQNIKGESALDLAKQRK-NVWM 225 (240)
T ss_dssp TTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH----------TCCTTCBCTTSCBHHHHHHHTT-CHHH
T ss_pred HHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc----------CCCCCCcCCCCCCHHHHHHHcC-cHHH
Confidence 999999999999998886 788999999988887777665543 2337788999999999999643 3333
Q ss_pred HHHHH
Q 010851 248 LQWLD 252 (499)
Q Consensus 248 l~~~~ 252 (499)
+..+.
T Consensus 226 v~~L~ 230 (240)
T 3eu9_A 226 INHLQ 230 (240)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.5e-33 Score=280.87 Aligned_cols=230 Identities=16% Similarity=0.122 Sum_probs=202.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc----CCCCCc---
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL----GANINA--- 79 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~----ga~~~~--- 79 (499)
+.+.+.+|..|.||||+|+..|+.++|++|+++|++++. .+|.||||+|+.. |+.+++++|+++ |++++.
T Consensus 43 g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~ 119 (364)
T 3ljn_A 43 GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMA-NKTDLVVALVEGAKERGQMPESLLN 119 (364)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHT-TCHHHHHHHHHHHHHHTCCHHHHHT
T ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHc-CCHHHHHHHHHhccccCCCHHHHHh
Confidence 567888999999999999999999999999999996644 5799999999998 999999999999 888776
Q ss_pred --------------cCCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 010851 80 --------------YRPGGRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHIC 143 (499)
Q Consensus 80 --------------~~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 143 (499)
. |..|.||||+|+..| +.++|++|+++|++++.+|..|.||||+|+..|+.++|++|+++|+
T Consensus 120 ~~~~~~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 197 (364)
T 3ljn_A 120 ECDEREVNEIGSHVK--HCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVP 197 (364)
T ss_dssp CCCCCCEEEETTEEE--EESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCS
T ss_pred hcchHhhhhhccccC--CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 6 778999999999999 9999999999999999999999999999999999999999999999
Q ss_pred c-----cccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCC--Cc
Q 010851 144 Y-----FCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDE--PK 216 (499)
Q Consensus 144 ~-----~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~ 216 (499)
+ ++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+..|+...... ..
T Consensus 198 ~~~~~~~~--~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~ 274 (364)
T 3ljn_A 198 SKSSLRLD--YANKQGNSHLH-WAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQA 274 (364)
T ss_dssp CSSSCCTT--CCCTTCCCTTH-HHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHT
T ss_pred cccccccc--ccCCCCCcHHH-HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhc
Confidence 8 88 89999999999 999999999999999999999999999999999999999988888877432111 01
Q ss_pred cCCCCCceeeecCCCcchhHhHhhCCCC
Q 010851 217 FHQPDPSLTIYDQATKIRYKFASANEGD 244 (499)
Q Consensus 217 ~~~~~~~~~~~d~~g~tpl~~a~~~~~~ 244 (499)
....+......+..++||+++|+.....
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~ 302 (364)
T 3ljn_A 275 CPYHNGTTVLPDRVVWLDFVPAAADPSK 302 (364)
T ss_dssp CTTBSSSSBCGGGCCCCTTSCSSCCHHH
T ss_pred CcccCcccccccccccccchhhhhccCH
Confidence 1112222446788899999999864433
No 34
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.3e-32 Score=251.16 Aligned_cols=164 Identities=24% Similarity=0.220 Sum_probs=158.6
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
..|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t 103 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKN-NRLGIAEKLLSKGSNVNTK--DFSGKT 103 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHTCCTTCC--CTTSCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHc-CCHHHHHHHHHCCCCCCCC--CCCCCc
Confidence 3567899999999999999999999999999999999999999999999998 9999999999999999998 889999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCH
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSR 168 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~ 168 (499)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~~~~ 180 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS--ARDLTGLTAEA-SARIFGRQ 180 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT--CBCTTSCBHHH-HHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHhCcH
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999 99999999
Q ss_pred HHHHHHHhcC
Q 010851 169 KIWVVVIPCG 178 (499)
Q Consensus 169 ~~~~~Ll~~g 178 (499)
+++++|+++|
T Consensus 181 ~~v~~Ll~~~ 190 (192)
T 2rfm_A 181 EVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999999875
No 35
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.2e-31 Score=239.54 Aligned_cols=160 Identities=25% Similarity=0.350 Sum_probs=152.5
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
....+.++|++|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~ 86 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFN-GHLEIVEVLLKNGADVNAV--DHAGMTPLRL 86 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCCCCHHHH
Confidence 356789999999999999999999999999999999999999999998 9999999999999999998 8899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..++.++++
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~l~-~A~~~~~~~~~~ 163 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN--AQDKFGKTAFD-ISIDNGNEDLAE 163 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HHHHhCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 89999999999 999999999999
Q ss_pred HHHhcC
Q 010851 173 VVIPCG 178 (499)
Q Consensus 173 ~Ll~~g 178 (499)
+|++.|
T Consensus 164 ~L~~~G 169 (169)
T 2y1l_E 164 ILQKLN 169 (169)
T ss_dssp HHHTC-
T ss_pred HHHHcC
Confidence 999876
No 36
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.98 E-value=4.7e-32 Score=270.09 Aligned_cols=216 Identities=19% Similarity=0.160 Sum_probs=194.9
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T 88 (499)
.+..+..|.|+||.|+..|+.+.|+.|+.. +.+++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+|
T Consensus 17 ~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t 93 (351)
T 3utm_A 17 AVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGY-NRVRIVQLLLQHGADVHAK--DKGGLV 93 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCC
T ss_pred eeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCCCc
Confidence 345677899999999999999999999875 899999999999999999998 9999999999999999998 889999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccc------------------
Q 010851 89 PLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLR------------------ 150 (499)
Q Consensus 89 pL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------------ 150 (499)
|||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT--LVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHCSSHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--cccCCCCcchHHHhhhhhHH
Confidence 9999999999999999999999999999999999999999999999999999999876 33
Q ss_pred ------------------------------------cccCCCHHHHHhhhc---CCHHHHHHHHhcCCCCCCCCcccccc
Q 010851 151 ------------------------------------EFYGPSFLEALAPQL---MSRKIWVVVIPCGTANPSKPLRFELV 191 (499)
Q Consensus 151 ------------------------------------~~~g~t~Lh~~A~~~---~~~~~~~~Ll~~ga~~~~~~~~~~~~ 191 (499)
+..|.|||| +|+.. +..+++++|+++|++++.++..+.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~-~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 250 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH-CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTP 250 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH-HHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH-HHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCH
Confidence 356788999 78877 56899999999999999999999999
Q ss_pred cCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhC
Q 010851 192 IYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (499)
Q Consensus 192 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~ 241 (499)
++++...+....+..|+.. +..++..|..|+||||+|+..
T Consensus 251 L~~A~~~g~~~~v~~Ll~~----------ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 251 LHVAAERAHNDVMEVLHKH----------GAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHT----------TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHC----------CCCCCCcCCCCCCHHHHHHHc
Confidence 9999998888777665543 334788999999999999963
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=3.5e-32 Score=256.52 Aligned_cols=179 Identities=23% Similarity=0.149 Sum_probs=164.8
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCC------CCccC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN------INAYR 81 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~------~~~~~ 81 (499)
.+.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++ ++..
T Consensus 36 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~- 113 (236)
T 1ikn_D 36 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQ-GCLASVGVLTQSCTTPHLHSILKAT- 113 (236)
T ss_dssp CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHH-TCHHHHHHHHHSTTTTSSSCGGGCC-
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHhcccchhHHHHhhcc-
Confidence 36788999999999999999999999999999999999999999999999998 999999999999986 3555
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHH
Q 010851 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRND-DCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEA 160 (499)
Q Consensus 82 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~ 160 (499)
+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.++|++|+++|++++ .+|..|+||||
T Consensus 114 -~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~tpl~- 189 (236)
T 1ikn_D 114 -NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN--RVTYQGYSPYQ- 189 (236)
T ss_dssp -CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC--CCCTTCCCGGG-
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--cccCCCCCHHH-
Confidence 78899999999999999999999999999999998 99999999999999999999999999999 99999999999
Q ss_pred HhhhcCCHHHHHHHHhcCCCCC--CCCccccccc
Q 010851 161 LAPQLMSRKIWVVVIPCGTANP--SKPLRFELVI 192 (499)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ga~~~--~~~~~~~~~l 192 (499)
+|+..++.+++++|+++|++.. ..+..++++.
T Consensus 190 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~ 223 (236)
T 1ikn_D 190 LTWGRPSTRIQQQLGQLTLENLQMLPESEDEESY 223 (236)
T ss_dssp GCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCC
T ss_pred HHHccCchHHHHHHHHcchhhhhcCCccchHHHH
Confidence 9999999999999999999765 3333344443
No 38
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=7.6e-32 Score=238.71 Aligned_cols=159 Identities=22% Similarity=0.290 Sum_probs=150.4
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHH
Q 010851 15 QSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (499)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~ 94 (499)
+...|+||+|+..|+.++|++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.+ |..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL--GNPEIARRLLLRGANPDLK--DRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS--SCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc--CcHHHHHHHHHcCCCCCCC--CCCCCCHHHHHH
Confidence 456899999999999999999999999999999999999999985 8899999999999999998 889999999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc-cccccccccCCCHHHHHhhhcCCHHHHHH
Q 010851 95 KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICY-FCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (499)
Q Consensus 95 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~ 173 (499)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++ .+|..|+|||| +|+..++.+++++
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~g~t~l~-~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG--HRNHKGDTACD-LARLYGRNEVVSL 155 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT--CCCTTSCCHHH-HHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC--CcCCCCCcHHH-HHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 46 89999999999 9999999999999
Q ss_pred HHhcCCC
Q 010851 174 VIPCGTA 180 (499)
Q Consensus 174 Ll~~ga~ 180 (499)
|+++|++
T Consensus 156 Ll~~GAd 162 (162)
T 1ihb_A 156 MQANGAG 162 (162)
T ss_dssp HHHTC--
T ss_pred HHHhCCC
Confidence 9999985
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=9e-33 Score=268.62 Aligned_cols=192 Identities=16% Similarity=0.154 Sum_probs=177.9
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
.-+.+.+|..|.||||+|+..|+.++|++|+++|++++.+ +|+||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 21 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--d~~g 95 (285)
T 3kea_A 21 SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATL-EDTKIVKILLFSGLDDSQF--DDKG 95 (285)
T ss_dssp STTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTS-SSCHHHHHHHHTTCCTTCC--CTTS
T ss_pred hCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHc-CCHHHHHHHHHCCCCCCCc--CCCC
Confidence 3467889999999999999999999999999999999887 499999999997 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCC-CCHHHHHHHcCCHHHHHHHHHcccccccccccc-cCCCHHHHHhhh
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDC-HTALGVARIKGHINVVRAIESHICYFCGWLREF-YGPSFLEALAPQ 164 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~Lh~~A~~ 164 (499)
+||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|++.. +. .|+|||| +|+.
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~g~t~L~-~A~~ 170 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF----DLAILLSCIH-ITIK 170 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC----CCSTHHHHHH-HHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc----cccCCccHHH-HHHH
Confidence 999999999999999999999999999999999 799999999999999999999998875 33 8999999 9999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCcccccc-cCccccccChHHHHHHH
Q 010851 165 LMSRKIWVVVIPCGTANPSKPLRFELV-IYPSLQDVQPRAVIALW 208 (499)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~-l~~~~~~~~~~~~~~l~ 208 (499)
.++.+++++|+++|++++.++..+.++ ++++........+..|+
T Consensus 171 ~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll 215 (285)
T 3kea_A 171 NGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALF 215 (285)
T ss_dssp TTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHT
T ss_pred cChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999997 89988887766655543
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=2.4e-31 Score=244.10 Aligned_cols=189 Identities=21% Similarity=0.188 Sum_probs=171.8
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGA-SLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
+..+.|+||+|+..|+.+.|+.|+.++. +++..|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~ 78 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHN-NDIEIAKALIDRGADINLQ--NSISDSPYLY 78 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCCCCHHHH
Confidence 3567899999999999999999999876 9999999999999999998 9999999999999999998 8899999999
Q ss_pred HHHcCCHHHHHHHH-HCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc-cccccccccccCCCHHHHHhhhcCC---
Q 010851 93 AAKRGLEPTVRLLL-SCGANALVRNDDCHTALGVARIKGHINVVRAIESHI-CYFCGWLREFYGPSFLEALAPQLMS--- 167 (499)
Q Consensus 93 A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~g~t~Lh~~A~~~~~--- 167 (499)
|+..|+.+++++|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++ .+|..|+|||| +|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~g~t~L~-~A~~~~~~~~ 155 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID--FQNDFGYTALI-EAVGLREGNQ 155 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT--CCCTTSCCHHH-HHHHSSCCSH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC--CCCCCCCCHHH-HHHHhccchh
Confidence 99999999999999 667899999999999999999999999999999999 8888 89999999999 8888887
Q ss_pred --HHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 168 --RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 168 --~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
.+++++|+++|++++.++..+.++++++........+..+.
T Consensus 156 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 198 (201)
T 3hra_A 156 LYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198 (201)
T ss_dssp HHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHH
Confidence 99999999999999999999999999988887766655543
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=5.7e-32 Score=242.22 Aligned_cols=167 Identities=23% Similarity=0.191 Sum_probs=154.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+.||||+|+..|+.++|++|++.+.+ ++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAF-GEIETVRFLLEWGADPHIL--AKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHT-TCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCchhh--cccCCCHHHHHHH
Confidence 56899999999999999999999987 889999999999999998 9999999999999999998 8899999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll 175 (499)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT--TEADSGYTPMD-LAVALGYRKVQQVIE 155 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHTCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCCHHH-HHHHhCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 89999999999 999999999999999
Q ss_pred hcCCCCCCCCcccc
Q 010851 176 PCGTANPSKPLRFE 189 (499)
Q Consensus 176 ~~ga~~~~~~~~~~ 189 (499)
++|++....+..+.
T Consensus 156 ~~~~~~~~~~~~~~ 169 (172)
T 3v30_A 156 NHILKLFQSNLVPA 169 (172)
T ss_dssp HHHHHHSCC-----
T ss_pred HHHHHHhcccCCCC
Confidence 99988766654443
No 42
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.98 E-value=5.7e-32 Score=273.18 Aligned_cols=197 Identities=15% Similarity=0.078 Sum_probs=185.2
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcC---CCCCccCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELG---ANINAYRP 82 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~g---a~~~~~~~ 82 (499)
.+++.|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|++++ ++++..
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~-- 231 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN-RDFGMMVYMLNSTKLKGDIEEL-- 231 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT-TCHHHHHHHTTSHHHHHTTSCC--
T ss_pred cCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHC-CCHHHHHHHHhcCccccChhhc--
Confidence 4678899999999999999999999999999999999999999999999999998 9999999999998 899988
Q ss_pred CCCCCcHHHHHHHcC---CHHHHHHHHHCCCCCcc--------cCCCCCCHHHHHHHcCCHHHHHHHHHcc-cccccccc
Q 010851 83 GGRGGTPLHHAAKRG---LEPTVRLLLSCGANALV--------RNDDCHTALGVARIKGHINVVRAIESHI-CYFCGWLR 150 (499)
Q Consensus 83 d~~g~TpL~~A~~~g---~~~~v~~Ll~~ga~~~~--------~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~ 150 (499)
|..|.||||+|+..+ +.+++++|+++|++++. .|..|.||||+|+..|+.++|++|++++ ++++ .+
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n--~~ 309 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD--KQ 309 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT--CC
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc--Cc
Confidence 889999999999998 89999999999999886 6779999999999999999999999887 8998 99
Q ss_pred cccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 151 EFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 151 ~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+..|.
T Consensus 310 d~~g~TpL~-~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll 366 (373)
T 2fo1_E 310 DEDGKTPIM-LAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 366 (373)
T ss_dssp CTTCCCHHH-HHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCHHH-HHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999 999999999999999999999999999999999999888877666554
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1e-31 Score=252.49 Aligned_cols=175 Identities=20% Similarity=0.156 Sum_probs=159.7
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASL-----EWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR 81 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-----~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~ 81 (499)
+.+.+.+|..|+||||+|+..|+.++|++|+++|+++ +.+|..|+||||+|+.. |+.+++++|+++|++++.++
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~ 105 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVIN-QNVNLVRALLARGASVSARA 105 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHc-CCHHHHHHHHhCCCCCCccc
Confidence 6788899999999999999999999999999999887 67788999999999998 99999999999999999873
Q ss_pred C-----------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHH----HHHHHcccccc
Q 010851 82 P-----------GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVV----RAIESHICYFC 146 (499)
Q Consensus 82 ~-----------d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v----~~Ll~~g~~~~ 146 (499)
. |..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++..
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 2 22799999999999999999999999999999999999999999999999988 99999999772
Q ss_pred c----ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCC
Q 010851 147 G----WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPS 183 (499)
Q Consensus 147 ~----~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~ 183 (499)
. ..+|..|+|||| +|+..++.+++++|+++|.+...
T Consensus 186 ~~~~~~~~~~~g~tpl~-~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 186 LKSLELVPNNQGLTPFK-LAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp SCCGGGCCCTTSCCHHH-HHHHHTCHHHHHHHHHHHHHC--
T ss_pred hhhhhccCCCCCCCHHH-HHHHcCCHHHHHHHHhcCccchh
Confidence 0 178999999999 99999999999999999976644
No 44
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.5e-31 Score=238.23 Aligned_cols=160 Identities=23% Similarity=0.231 Sum_probs=154.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+|.||||+|+..|+.++|++|++.|.+++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAH-GQIAVVEFLLQNGADPQLL--GKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCc--CCCCCcHHHHHHH
Confidence 588999999999999999999999999999999999999999998 9999999999999999998 8899999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll 175 (499)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~l~-~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT--IETDSGYNSMD-LAVALGYRSVQQVIE 155 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HHHHcCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998 89999999999 999999999999999
Q ss_pred hcCCCC
Q 010851 176 PCGTAN 181 (499)
Q Consensus 176 ~~ga~~ 181 (499)
+++.+.
T Consensus 156 ~~~~~~ 161 (167)
T 3v31_A 156 SHLLKL 161 (167)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.1e-31 Score=243.31 Aligned_cols=165 Identities=20% Similarity=0.217 Sum_probs=158.4
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHH-HcCCCCCccCCCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRG 86 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll-~~ga~~~~~~~d~~g 86 (499)
.+.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+ ..+++++.. |..|
T Consensus 30 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~~~~~~~~~--~~~g 106 (201)
T 3hra_A 30 YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ-GRTEILAYMLKHATPDLNKH--NRYG 106 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHSCCCTTCC--CTTS
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhccCcccccc--cCCC
Confidence 47788999999999999999999999999999999999999999999999998 9999999999 667799988 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCC-CCCcccCCCCCCHHHHHHHcCC-----HHHHHHHHHcccccccccccccCCCHHHH
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVARIKGH-----INVVRAIESHICYFCGWLREFYGPSFLEA 160 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~g~-----~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~ 160 (499)
.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++ .+|..|+||||
T Consensus 107 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~- 183 (201)
T 3hra_A 107 GNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS--IKDNSGRTAMD- 183 (201)
T ss_dssp CCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT--CCCTTSCCHHH-
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC--ccCCCCCCHHH-
Confidence 99999999999999999999999 9999999999999999999998 999999999999999 99999999999
Q ss_pred HhhhcCCHHHHHHHHhcC
Q 010851 161 LAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~g 178 (499)
+|+..++.+++++|+++|
T Consensus 184 ~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 184 YANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTCHHHHHHHHTCC
T ss_pred HHHHcCCHhHHHHHHhcC
Confidence 999999999999999887
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=8.8e-31 Score=244.38 Aligned_cols=169 Identities=22% Similarity=0.209 Sum_probs=163.0
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-SLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+.+.+.+|..|.||||+|+..|+.+++++|++++. +++..+..|.||||+|+.. |+.+++++|+++|++++.+ |..
T Consensus 48 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~ 124 (223)
T 2f8y_A 48 SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL-AVEGMLEDLINSHADVNAV--DDL 124 (223)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCTTCB--CTT
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh-CcHHHHHHHHHcCCCCcCc--CCC
Confidence 56778899999999999999999999999999987 8999999999999999998 9999999999999999998 889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~ 201 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD--ITDHMDRLPRD-IAQER 201 (223)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHH-HHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc--cccccCCCHHH-HHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999 89999999999 99999
Q ss_pred CCHHHHHHHHhcCCCC
Q 010851 166 MSRKIWVVVIPCGTAN 181 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~ 181 (499)
++.+++++|+++|+..
T Consensus 202 ~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 202 MHHDIVRLLDEYNLVR 217 (223)
T ss_dssp TCHHHHHHHHHTTCSS
T ss_pred cchHHHHHHHHcCCCc
Confidence 9999999999999865
No 47
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2.4e-31 Score=259.61 Aligned_cols=187 Identities=21% Similarity=0.228 Sum_probs=173.6
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+++.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.. |..|
T Consensus 63 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g 139 (299)
T 1s70_B 63 GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC-GYLDIAEYLISQGAHVGAV--NSEG 139 (299)
T ss_dssp CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTS
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCCc--CCCC
Confidence 567888999999999999999999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCc--------------------------ccCCCCCCHHHHHHHcCCHHHHHHHH
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSC-GANAL--------------------------VRNDDCHTALGVARIKGHINVVRAIE 139 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~-ga~~~--------------------------~~d~~g~tpL~~A~~~g~~~~v~~Ll 139 (499)
.||||+|+..++.++++.|+.. |.+++ ..+..|.||||+|+..|+.+++++|+
T Consensus 140 ~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (299)
T 1s70_B 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219 (299)
T ss_dssp CCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHH
Confidence 9999999999999999877643 44433 35678999999999999999999999
Q ss_pred HcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcccccc
Q 010851 140 SHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV 199 (499)
Q Consensus 140 ~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~ 199 (499)
++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++..+.
T Consensus 220 ~~g~d~~--~~d~~g~tpL~-~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 276 (299)
T 1s70_B 220 QARYDVN--IKDYDGWTPLH-AAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276 (299)
T ss_dssp TTTCCTT--CCCTTCCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG
T ss_pred HcCCCCC--CcCCCCCcHHH-HHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH
Confidence 9999999 99999999999 999999999999999999999999999999999997643
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=3.6e-31 Score=238.75 Aligned_cols=167 Identities=23% Similarity=0.255 Sum_probs=156.9
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 15 QSKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
.++.++||.|+..|+.++|++|+++ +.+++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A 79 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACRE-GRSAVVEMLIMRGARINVM--NRGDDTPLHLA 79 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCCCc--CCCCCCHHHHH
Confidence 4678999999999999999999997 678999999999999999998 9999999999999999998 88999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHH
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~ 173 (499)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~tpl~-~A~~~~~~~~~~~ 156 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS--ICNKYGEMPVD-KAKAPLRELLRER 156 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS--BCCTTSCCGGG-GSCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc--hhccCCCCcHH-HHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999 9999999999999
Q ss_pred HHhcCCCCCCCCcc
Q 010851 174 VIPCGTANPSKPLR 187 (499)
Q Consensus 174 Ll~~ga~~~~~~~~ 187 (499)
|+++|++++..+..
T Consensus 157 L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 157 AEKMGQNLNRIPYK 170 (179)
T ss_dssp HHHTTCCCSCBCCC
T ss_pred HHHhhcCcccCCcc
Confidence 99999999876643
No 49
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.1e-30 Score=259.94 Aligned_cols=217 Identities=20% Similarity=0.107 Sum_probs=187.7
Q ss_pred ccCccccCC-CchHHHHHHHHcCCHHHHHHHHHcCCCC---------------------------------cccCCCCCh
Q 010851 7 SMNQHQQRQ-SKDELLYQWVIAGDVDAIRALRSQGASL---------------------------------EWMDKEGKT 52 (499)
Q Consensus 7 ~~~~~~~d~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---------------------------------~~~d~~g~T 52 (499)
++++|.++. .|+||||+|+..|+.++|++||++|+++ +.+|..|+|
T Consensus 48 Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t 127 (337)
T 4g8k_A 48 GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFT 127 (337)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCB
T ss_pred CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCC
Confidence 577887765 5999999999999999999999998765 456778999
Q ss_pred HHHHHHHcCCcHHHHHHHHHcCCCCCccC--------CCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHH
Q 010851 53 PLIVACMDSGLINVAKTLIELGANINAYR--------PGGRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTAL 123 (499)
Q Consensus 53 pLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~--------~d~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL 123 (499)
|||+|+.. |+.+++++|+++|++++... .+..|.||||+|+..|+.++|++||+ .|++++.+|..|.|+|
T Consensus 128 ~l~~A~~~-~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l 206 (337)
T 4g8k_A 128 AFMEAAVY-GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 206 (337)
T ss_dssp HHHHHHHT-TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred HHHHHHHc-CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHH
Confidence 99999998 99999999999999998652 24468999999999999999999995 6999999999999999
Q ss_pred HHHHHcCC----HHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhc-CCCCCCCCcccccccCccccc
Q 010851 124 GVARIKGH----INVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC-GTANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 124 ~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~l~~~~~~ 198 (499)
|.++..+. ..++++|+++|++++ .+|..|+|||| +|+..++.+++++|+.. |++++.++..++++++++...
T Consensus 207 ~~~~~~~~~~~~~~i~~lLl~~gad~n--~~d~~g~t~L~-~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 207 IHALLSSDDSDVEAITHLLLDHGADVN--VRGERGKTPLI-LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHHHHHSCTTTHHHHHHHHHHTTCCTT--CCCGGGCCHHH-HHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHHcCcccHHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 99887554 468999999999999 99999999999 99999999999999985 899999999999999999998
Q ss_pred cChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhhCC
Q 010851 199 VQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (499)
Q Consensus 199 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~~~ 242 (499)
+....+..|++.. .+ + +.++||++|+.+.
T Consensus 284 g~~~iv~~Ll~~G--------Ad--~-----n~~~~L~~A~~~~ 312 (337)
T 4g8k_A 284 KLKKIAELLCKRG--------AS--T-----DCGDLVMTARRNY 312 (337)
T ss_dssp TCHHHHHHHHTTS--------CS--S-----TTCCHHHHHHHTT
T ss_pred CCHHHHHHHHHCC--------CC--C-----CCCCHHHHHHHcC
Confidence 8877776655332 22 3 3467999999643
No 50
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=3.9e-31 Score=235.10 Aligned_cols=160 Identities=24% Similarity=0.241 Sum_probs=149.6
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
.|.+|.|+||+|+..|+.++|++|++ .+.+++..+..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~ 80 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGY-NRVSVVEYLLQHGADVHAK--DKGGLVPLH 80 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHc-ChHHHHHHHHhcCCCCCcc--CCCCCCHHH
Confidence 47889999999999999999999998 5568888899999999999998 9999999999999999998 889999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHH
Q 010851 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIW 171 (499)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~ 171 (499)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|.. ++.+++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~a~~-~~~~i~ 156 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT--KKNRDGNTPLD-LVKD-GDTDIQ 156 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCTGG-GSCT-TCHHHH
T ss_pred HHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCChhH-hHhc-CChHHH
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999 7766 899999
Q ss_pred HHHHhcCC
Q 010851 172 VVVIPCGT 179 (499)
Q Consensus 172 ~~Ll~~ga 179 (499)
++|+++|+
T Consensus 157 ~~L~~~gA 164 (165)
T 3twr_A 157 DLLRGDAA 164 (165)
T ss_dssp HHHHTC--
T ss_pred HHHhhccc
Confidence 99999886
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.9e-31 Score=235.63 Aligned_cols=138 Identities=33% Similarity=0.468 Sum_probs=130.0
Q ss_pred cccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 6 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
.++++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|+++|.+ |..
T Consensus 26 ~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~gadvn~~--d~~ 102 (169)
T 4gpm_A 26 NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN-GHKEVVKLLISKGADVNAK--DSD 102 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTT
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc-CCHHHHHHHHHCcCCCCCC--CCC
Confidence 3678899999999999999999999999999999999999999999999999998 9999999999999999998 889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 103 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 103 GRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.5e-31 Score=255.46 Aligned_cols=169 Identities=18% Similarity=0.111 Sum_probs=157.0
Q ss_pred ccCccc----cCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCccc-----------CCCCChHHHHHHHcCCcHHHHH
Q 010851 7 SMNQHQ----QRQSKDELLYQWVIA---GDVDAIRALRSQGASLEWM-----------DKEGKTPLIVACMDSGLINVAK 68 (499)
Q Consensus 7 ~~~~~~----~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~-----------d~~g~TpLh~Aa~~~g~~~~v~ 68 (499)
+.+++. +|..|.||||+|+.. |+.++|++|+++|++++.. |..|+||||+|+.. |+.++++
T Consensus 29 g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~-g~~~~v~ 107 (256)
T 2etb_A 29 SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK-RSLQCVK 107 (256)
T ss_dssp TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT-TCHHHHH
T ss_pred CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHc-CCHHHHH
Confidence 567776 899999999999999 9999999999999877633 36799999999998 9999999
Q ss_pred HHHHcCCCCCccCCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---CCCCCcccCCCCCCHHHHHHH--cC
Q 010851 69 TLIELGANINAYRPGGR-------------GGTPLHHAAKRGLEPTVRLLLS---CGANALVRNDDCHTALGVARI--KG 130 (499)
Q Consensus 69 ~Ll~~ga~~~~~~~d~~-------------g~TpL~~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~--~g 130 (499)
+|+++|++++.+ +.. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .+
T Consensus 108 ~Ll~~ga~~~~~--~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~ 185 (256)
T 2etb_A 108 LLVENGADVHLR--ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADN 185 (256)
T ss_dssp HHHHTTCCTTCC--CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHHHcCCCCCcc--cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccC
Confidence 999999999998 554 9999999999999999999999 999999999999999999999 88
Q ss_pred CHH-------HHHHHHHccccc-------ccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCC
Q 010851 131 HIN-------VVRAIESHICYF-------CGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTAN 181 (499)
Q Consensus 131 ~~~-------~v~~Ll~~g~~~-------~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~ 181 (499)
+.+ ++++|+++|+++ + .+|..|+|||| +|+..++.+++++|+++|.+.
T Consensus 186 ~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~--~~d~~g~tpL~-~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 186 SPENSALVIHMYDGLLQMGARLCPTVQLEE--ISNHQGLTPLK-LAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTCCGGG--CCCTTSCCHHH-HHHHTTCHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHcCCCccccccccc--ccCCCCCCHHH-HHHHhCCHHHHHHHHhCCCCC
Confidence 888 999999999999 7 89999999999 999999999999999998753
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.2e-31 Score=256.08 Aligned_cols=190 Identities=16% Similarity=0.138 Sum_probs=172.2
Q ss_pred chHHHHHHHHcCCHH----HHHHHHHcCCCCcc----cCCCCChHHHHHHHc--CCcHHHHHHHHHcCCCCCcc------
Q 010851 17 KDELLYQWVIAGDVD----AIRALRSQGASLEW----MDKEGKTPLIVACMD--SGLINVAKTLIELGANINAY------ 80 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~----~v~~Ll~~g~~~~~----~d~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~~~~------ 80 (499)
|+||||+|+..|+.+ ++++|+++|++++. +|..|+||||+|+.. .|+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 899999999999997 66777789999998 899999999999973 27899999999999887633
Q ss_pred ---CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCC-------------CCCHHHHHHHcCCHHHHHHHHH---c
Q 010851 81 ---RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDD-------------CHTALGVARIKGHINVVRAIES---H 141 (499)
Q Consensus 81 ---~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-------------g~tpL~~A~~~g~~~~v~~Ll~---~ 141 (499)
+.|..|+||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 12478999999999999999999999999999999886 9999999999999999999999 9
Q ss_pred ccccccccccccCCCHHHHHhhh--cCCHH-------HHHHHHhcCCCC-------CCCCcccccccCccccccChHHHH
Q 010851 142 ICYFCGWLREFYGPSFLEALAPQ--LMSRK-------IWVVVIPCGTAN-------PSKPLRFELVIYPSLQDVQPRAVI 205 (499)
Q Consensus 142 g~~~~~~~~~~~g~t~Lh~~A~~--~~~~~-------~~~~Ll~~ga~~-------~~~~~~~~~~l~~~~~~~~~~~~~ 205 (499)
|++++ .+|..|+|||| +|+. .++.+ ++++|+++|+++ +.++..+.++++++...+....+.
T Consensus 162 ga~~n--~~d~~g~TpLh-~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 162 PASLE--ATDSLGNTVLH-ALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp CCCTT--CCCTTSCCHHH-HHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCcC--ccCCCCCCHHH-HHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 99999 99999999999 8887 78888 999999999999 888999999999999988877777
Q ss_pred HHHH
Q 010851 206 ALWK 209 (499)
Q Consensus 206 ~l~~ 209 (499)
.|++
T Consensus 239 ~Ll~ 242 (256)
T 2etb_A 239 HILQ 242 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6663
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-30 Score=228.34 Aligned_cols=152 Identities=24% Similarity=0.257 Sum_probs=146.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
++.|+||+|+..|+.++|++|+++|++++ .|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+.
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~ 76 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQY-GHFSTTEVLLRAGVSRDAR--TKVDRTPLHMAAS 76 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHH-TCHHHHHHHHTTTCCTTCC--CTTCCCHHHHHHH
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHH
Confidence 35799999999999999999999999886 588999999999998 9999999999999999998 8899999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVV 174 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~L 174 (499)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~~~~~i~~~L 152 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH--TQSKFCKTAFD-ISIDNGNEDLAEIL 152 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCCHHH-HHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999 89999999999 99999999999987
No 55
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.9e-31 Score=255.95 Aligned_cols=202 Identities=16% Similarity=0.178 Sum_probs=163.5
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHH----cCCCCc----ccCCCCChHHHHHHHc--CCcHHHHHHHHHcCCCC
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRS----QGASLE----WMDKEGKTPLIVACMD--SGLINVAKTLIELGANI 77 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~----~g~~~~----~~d~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~ 77 (499)
...+..|..|+||||+|+..|+.++|+.|++ .+++++ ..|..|+||||+|+.. .|+.+++++|+++|+++
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 4456678899999999999999998888886 566665 3578899999999963 37889999999988652
Q ss_pred -------Cc--cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCC--------------CCCCHHHHHHHcCCHHH
Q 010851 78 -------NA--YRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRND--------------DCHTALGVARIKGHINV 134 (499)
Q Consensus 78 -------~~--~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~--------------~g~tpL~~A~~~g~~~~ 134 (499)
+. .++|..|+||||+|+..|+.++|++|+++|++++.++. .|.||||+|+..|+.++
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 22 22366899999999999999999999999999988887 79999999999999999
Q ss_pred HHHHHH---cccccccccccccCCCHHHHHhhhcCC---------HHHHHHHHhcCCCCCC-------CCcccccccCcc
Q 010851 135 VRAIES---HICYFCGWLREFYGPSFLEALAPQLMS---------RKIWVVVIPCGTANPS-------KPLRFELVIYPS 195 (499)
Q Consensus 135 v~~Ll~---~g~~~~~~~~~~~g~t~Lh~~A~~~~~---------~~~~~~Ll~~ga~~~~-------~~~~~~~~l~~~ 195 (499)
|++|++ +|++++ .+|..|+|||| +|+..++ .+++++|+++|++++. ++..+.++++++
T Consensus 164 v~~Ll~~~~~gad~~--~~d~~g~tpLh-~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 164 VKFLLQNSWQPADIS--ARDSVGNTVLH-ALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHCSSCCCCTT--CCCTTSCCHHH-HHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHhcccCCCCce--eeCCCCCcHHH-HHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 999999 889988 88999999999 8888777 7899999999998864 777888999998
Q ss_pred ccccChHHHHHHHHhhc
Q 010851 196 LQDVQPRAVIALWKAKI 212 (499)
Q Consensus 196 ~~~~~~~~~~~l~~~~~ 212 (499)
...+....+..|+....
T Consensus 241 ~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHTTCHHHHHHHHHHHT
T ss_pred HHhChHHHHHHHHHCCC
Confidence 88888877777775554
No 56
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.8e-30 Score=242.99 Aligned_cols=198 Identities=19% Similarity=0.204 Sum_probs=183.9
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~ 85 (499)
+.+.+.+|..|.||||+|+..|+.++|++|+++|++++..+. .|.||||+|+.. |+.+++++|+++|++++.+ +..
T Consensus 32 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~ 108 (240)
T 3eu9_A 32 GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ-GHLSMVVQLMKYGADPSLI--DGE 108 (240)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTT
T ss_pred CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc-CCHHHHHHHHHcCCCCccc--CCC
Confidence 567888899999999999999999999999999999886654 599999999998 9999999999999999998 889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHHHcccccccccccc-cCCCHHHHHhh
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH-INVVRAIESHICYFCGWLREF-YGPSFLEALAP 163 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~-~g~t~Lh~~A~ 163 (499)
|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++ .+++++|++.|++++ ..+. .|.|||| +|+
T Consensus 109 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~--~~~~~~g~t~L~-~A~ 185 (240)
T 3eu9_A 109 GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVN--LGDKYHKNTALH-WAV 185 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTT--CCCTTTCCCHHH-HHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcc--hhhccCCCcHHH-HHH
Confidence 9999999999999999999999999999999999999999997776 899999999999998 7776 8999999 999
Q ss_pred hcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHh
Q 010851 164 QLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKA 210 (499)
Q Consensus 164 ~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 210 (499)
..++.+++++|+++|++++.++..+.++++++.+......+..+.+.
T Consensus 186 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~ 232 (240)
T 3eu9_A 186 LAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232 (240)
T ss_dssp HHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHh
Confidence 99999999999999999999999999999999999888777766543
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=252.73 Aligned_cols=165 Identities=21% Similarity=0.255 Sum_probs=157.4
Q ss_pred CccccCCCchHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHH-----HcCCcHHHHHHHHHcCCCCCccCC
Q 010851 9 NQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-SLEWMDKEGKTPLIVAC-----MDSGLINVAKTLIELGANINAYRP 82 (499)
Q Consensus 9 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~d~~g~TpLh~Aa-----~~~g~~~~v~~Ll~~ga~~~~~~~ 82 (499)
..|.+|..|+||||+|+..|+.++|++|+++|+ +++..|..|+||||+|+ .. ++.+++++|++.|.+++..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~-~~~~~v~~Ll~~g~~~~~~-- 179 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQ-DDIETVLQLFRLGNINAKA-- 179 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSH-HHHHHHHHHHHHSCTTCCC--
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhh-hhHHHHHHHHHcCCCcccc--
Confidence 377899999999999999999999999999998 99999999999999999 54 7899999999999999887
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cccccccccccccCCCHHHHH
Q 010851 83 GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEAL 161 (499)
Q Consensus 83 d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~Lh~~ 161 (499)
+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|++ .|++++ .+|..|+|||| +
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~--~~d~~g~TpL~-~ 256 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS--LTDRDGSTALM-V 256 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT--CCCTTSCCHHH-H
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc--CcCCCCCCHHH-H
Confidence 8899999999999999999999999999999999999999999999999999999999 899999 99999999999 9
Q ss_pred hhhcCCHHHHHHHHhcCC
Q 010851 162 APQLMSRKIWVVVIPCGT 179 (499)
Q Consensus 162 A~~~~~~~~~~~Ll~~ga 179 (499)
|+..++.+++++|++++.
T Consensus 257 A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 257 ALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHTCHHHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHhccC
Confidence 999999999999998763
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5e-31 Score=254.30 Aligned_cols=168 Identities=18% Similarity=0.136 Sum_probs=151.3
Q ss_pred ccCCCchHHHHHHHHc---CCHHHHHHHHHcCCCC-------cc----cCCCCChHHHHHHHcCCcHHHHHHHHHcCCCC
Q 010851 12 QQRQSKDELLYQWVIA---GDVDAIRALRSQGASL-------EW----MDKEGKTPLIVACMDSGLINVAKTLIELGANI 77 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~-------~~----~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~ 77 (499)
.+|..|.||||+|+.. |+.++|++|+++|+++ +. .|..|+||||+|+.. |+.+++++|+++|+++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~-g~~~~v~~Ll~~ga~~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER-RNMTLVTLLVENGADV 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHT-TCHHHHHHHHHTTCCT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHc-CCHHHHHHHHHCCCCc
Confidence 3588999999999987 9999999999998652 22 567899999999998 9999999999999999
Q ss_pred CccCCCC--------------CCCcHHHHHHHcCCHHHHHHHHH---CCCCCcccCCCCCCHHHHHHHcCC---------
Q 010851 78 NAYRPGG--------------RGGTPLHHAAKRGLEPTVRLLLS---CGANALVRNDDCHTALGVARIKGH--------- 131 (499)
Q Consensus 78 ~~~~~d~--------------~g~TpL~~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~g~--------- 131 (499)
+.+ +. .|+||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+..|+
T Consensus 128 ~~~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~ 205 (273)
T 2pnn_A 128 QAA--ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFV 205 (273)
T ss_dssp TCC--BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred Ccc--ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHH
Confidence 998 54 79999999999999999999999 999999999999999999999998
Q ss_pred HHHHHHHHHccccccc-----ccccccCCCHHHHHhhhcCCHHHHHHHHhcCC-CCCC
Q 010851 132 INVVRAIESHICYFCG-----WLREFYGPSFLEALAPQLMSRKIWVVVIPCGT-ANPS 183 (499)
Q Consensus 132 ~~~v~~Ll~~g~~~~~-----~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga-~~~~ 183 (499)
.+++++|+++|++++. ..+|..|+|||| +|+..++.+++++|+++|+ |+..
T Consensus 206 ~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~-~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 206 TSMYNEILILGAKLHPTLKLEEITNRKGLTPLA-LAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH-HHHHTTCHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHhhhhcccccccccccCCCCCCHHH-HHHHhChHHHHHHHHHCCCCCchh
Confidence 8999999999999862 148999999999 9999999999999999999 4443
No 59
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=5.4e-30 Score=225.39 Aligned_cols=154 Identities=27% Similarity=0.322 Sum_probs=147.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~ 94 (499)
.|.|+||+|+..|+.+++++|+++ +.+++..|..|+||||+ +.. |+.+++++|+++|++++.+ |..|+||||+|+
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~ 76 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMF-GSTAIALELLKQGASPNVQ--DTSGTSPVHDAA 76 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHc-CCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHH
Confidence 368999999999999999999998 45899999999999999 876 9999999999999999998 889999999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHH
Q 010851 95 KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVV 174 (499)
Q Consensus 95 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~L 174 (499)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++ .+|..|+|||| +|+..++.+++++|
T Consensus 77 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~--~~~~~g~t~l~-~A~~~~~~~~v~~L 152 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH--RRDARGLTPLE-LALQRGAQDLVDIL 152 (156)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT--CCCTTSCCHHH-HHHHSCCHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC--CcCCCCCCHHH-HHHHcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 8988 89999999999 99999999999999
Q ss_pred Hhc
Q 010851 175 IPC 177 (499)
Q Consensus 175 l~~ 177 (499)
+++
T Consensus 153 l~~ 155 (156)
T 1bd8_A 153 QGH 155 (156)
T ss_dssp HTT
T ss_pred Hhh
Confidence 875
No 60
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1e-30 Score=259.23 Aligned_cols=178 Identities=13% Similarity=0.079 Sum_probs=152.3
Q ss_pred ccCccc-cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCc---HHHHHHHHHcC-CCCCccC
Q 010851 7 SMNQHQ-QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL---INVAKTLIELG-ANINAYR 81 (499)
Q Consensus 7 ~~~~~~-~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~---~~~v~~Ll~~g-a~~~~~~ 81 (499)
++++|. +|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|+.. |+ .++++.|++++ ++++.+
T Consensus 120 g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~-g~~~~~~~~~~ll~~~~~~~~~~- 197 (327)
T 1sw6_A 120 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKS-VNNYDSGTFEALLDYLYPCLILE- 197 (327)
T ss_dssp CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHS-SHHHHTTCHHHHHHHHGGGGGEE-
T ss_pred CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh-cccccHHHHHHHHHhhhccccCC-
Confidence 477888 899999999999999999999999999999999999999999999997 77 68888888886 789988
Q ss_pred CCCCCCcHHHHHHH----cCCHHHHHHHHHC--------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHH
Q 010851 82 PGGRGGTPLHHAAK----RGLEPTVRLLLSC--------------------GANALVRNDDCHTALGVARIKGHINVVRA 137 (499)
Q Consensus 82 ~d~~g~TpL~~A~~----~g~~~~v~~Ll~~--------------------ga~~~~~d~~g~tpL~~A~~~g~~~~v~~ 137 (499)
|..|+||||+|+. .|+.+++++|++. |++++.+|..|.||||+|+. +++
T Consensus 198 -d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~ 270 (327)
T 1sw6_A 198 -DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKW 270 (327)
T ss_dssp -CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHH
T ss_pred -CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHH
Confidence 8899999999999 8999999999987 89999999999999999985 899
Q ss_pred HHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccc
Q 010851 138 IESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (499)
Q Consensus 138 Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 198 (499)
|+++ +++ .+|..|+|||| +|+..++.+++++|+++|++++.++..++++++++.+.
T Consensus 271 Ll~~--~~n--~~d~~G~TpLh-~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 271 IIAN--MLN--AQDSNGDTCLN-IAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHH--TTT--CCCTTSCCHHH-HHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHHh--CCC--CCCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 9988 466 78999999999 99999999999999999999999999999999988753
No 61
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.6e-30 Score=252.73 Aligned_cols=187 Identities=14% Similarity=0.074 Sum_probs=166.4
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC-
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG- 86 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g- 86 (499)
.+.+.+ +|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ +..|
T Consensus 55 ~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--~~~g~ 129 (285)
T 3kea_A 55 ALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS-GNMQTVKLFVKKNWRLMFY--GKTGW 129 (285)
T ss_dssp GGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCGGGGGC--SSSGG
T ss_pred CCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc-CCHHHHHHHHhcCCCCCcc--CCCCC
Confidence 344444 599999999999999999999999999999999999999999998 9999999999999999998 7888
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCH-HHHHhhhc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSF-LEALAPQL 165 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~-Lh~~A~~~ 165 (499)
.||||+|+..|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|+++|++++ .+|..|+|| || +|+..
T Consensus 130 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n--~~~~~g~t~~L~-~A~~~ 205 (285)
T 3kea_A 130 KTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTN--TNNSLLFIPDIK-LAIDN 205 (285)
T ss_dssp GSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTC--TTCCCBCCTTHH-HHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCC--cccCCCCChHHH-HHHHc
Confidence 79999999999999999999999887322 289999999999999999999999999999 999999998 99 99999
Q ss_pred CCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHh
Q 010851 166 MSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKA 210 (499)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 210 (499)
++.+++++|+++|++++..+. .+...+....+..++..
T Consensus 206 ~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~ 243 (285)
T 3kea_A 206 KDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEK 243 (285)
T ss_dssp TCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHc
Confidence 999999999999999998873 23344555555555533
No 62
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.6e-30 Score=248.80 Aligned_cols=164 Identities=20% Similarity=0.116 Sum_probs=150.1
Q ss_pred CCCchHHHHHHH---HcCCHHHHHHHHHcCCC-----------CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCc
Q 010851 14 RQSKDELLYQWV---IAGDVDAIRALRSQGAS-----------LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINA 79 (499)
Q Consensus 14 d~~g~t~L~~Aa---~~g~~~~v~~Ll~~g~~-----------~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~ 79 (499)
|..|.||||+|+ ..|+.++|++|+++|++ ++..|..|+||||+|+.. |+.+++++|+++|++++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIER-RCKHYVELLVEKGADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHT-TCHHHHHHHHHTTCCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHc-CCHHHHHHHHhCCCCcCc
Confidence 477999999999 77999999999998743 445556899999999998 999999999999999999
Q ss_pred cCCC--------------CCCCcHHHHHHHcCCHHHHHHHHH---CCCCCcccCCCCCCHHHHHHHcCC---------HH
Q 010851 80 YRPG--------------GRGGTPLHHAAKRGLEPTVRLLLS---CGANALVRNDDCHTALGVARIKGH---------IN 133 (499)
Q Consensus 80 ~~~d--------------~~g~TpL~~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~g~---------~~ 133 (499)
+ + ..|+||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+..++ .+
T Consensus 122 ~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 199 (260)
T 3jxi_A 122 Q--ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTK 199 (260)
T ss_dssp C--CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHH
T ss_pred c--ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHH
Confidence 8 5 589999999999999999999999 999999999999999999999888 79
Q ss_pred HHHHHHHccccccc-----ccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCC
Q 010851 134 VVRAIESHICYFCG-----WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTAN 181 (499)
Q Consensus 134 ~v~~Ll~~g~~~~~-----~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~ 181 (499)
++++|+++|++++. ..+|..|+|||| +|+..|+.+++++|+++|++.
T Consensus 200 ~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~-~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 200 MYDLLLIKCAKLFPDTNLEALLNNDGLSPLM-MAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH-HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccccccchhhcccCCCCCHHH-HHHHcCCHHHHHHHHHhCCCc
Confidence 99999999999831 278999999999 999999999999999999754
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.9e-30 Score=248.14 Aligned_cols=192 Identities=16% Similarity=0.114 Sum_probs=168.6
Q ss_pred CCCchHHHHHHHHcCCHHHHH----HHHHcCCCCcccC----CCCChHHHHHH---HcCCcHHHHHHHHHcCCC------
Q 010851 14 RQSKDELLYQWVIAGDVDAIR----ALRSQGASLEWMD----KEGKTPLIVAC---MDSGLINVAKTLIELGAN------ 76 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~----~Ll~~g~~~~~~d----~~g~TpLh~Aa---~~~g~~~~v~~Ll~~ga~------ 76 (499)
+.-|+|+||.|++.|+.+.|+ +|++.|++++..+ ..|+||||+|+ .. |+.+++++|+++|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSA-GRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBT-TBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhc-CCHHHHHHHHHhcccccchHh
Confidence 456899999999999999554 4455999998776 77999999999 55 999999999999854
Q ss_pred ---CCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC--------------CCCCCHHHHHHHcCCHHHHHHHH
Q 010851 77 ---INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN--------------DDCHTALGVARIKGHINVVRAIE 139 (499)
Q Consensus 77 ---~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~tpL~~A~~~g~~~~v~~Ll 139 (499)
.+..+.|..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..|+.++|++|+
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 2222225689999999999999999999999999999998 68999999999999999999999
Q ss_pred H---cccccccccccccCCCHHHHHhhhcCC---------HHHHHHHHhcCCCC-------CCCCcccccccCccccccC
Q 010851 140 S---HICYFCGWLREFYGPSFLEALAPQLMS---------RKIWVVVIPCGTAN-------PSKPLRFELVIYPSLQDVQ 200 (499)
Q Consensus 140 ~---~g~~~~~~~~~~~g~t~Lh~~A~~~~~---------~~~~~~Ll~~ga~~-------~~~~~~~~~~l~~~~~~~~ 200 (499)
+ +|++++ .+|..|+|||| +|+..++ .+++++|+++|+++ +.++..+.++++++...+.
T Consensus 161 ~~~~~ga~~~--~~d~~g~TpLh-~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 161 ENGHKQADLR--RQDSRGNTVLH-ALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HCSSCCCCTT--CCCTTSCCHHH-HHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred hccccCCCCc--ccCCCCCcHHH-HHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 9 999999 99999999999 8887776 79999999999998 5688899999999999888
Q ss_pred hHHHHHHHH
Q 010851 201 PRAVIALWK 209 (499)
Q Consensus 201 ~~~~~~l~~ 209 (499)
...+..|++
T Consensus 238 ~~~v~~Ll~ 246 (260)
T 3jxi_A 238 IGIFQHIIR 246 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877777663
No 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.4e-30 Score=244.79 Aligned_cols=168 Identities=12% Similarity=0.031 Sum_probs=125.6
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
+..|.||||.|+..|+.++++.||++|++++.. ..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLE-GEFDLVQRIIYEVDDPSLP--NDEGITALHNA 77 (239)
T ss_dssp ------------------------------------CHHHHHHHHHH-TCHHHHHHHTSTTSSCCCC--CTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHc-CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHH
Confidence 457999999999999999999999999999865 7899999999998 9999999999999999998 88999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCC-CHHHHHh--hhcCCHHH
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGP-SFLEALA--PQLMSRKI 170 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~-t~Lh~~A--~~~~~~~~ 170 (499)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++ .++..|. |||| +| +..++.++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~~~~t~l~-~a~~~~~g~~~~ 154 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF--AMTYSDMQTAAD-KCEEMEEGYTQC 154 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCSSSCCCHHH-HCCSSSTTCCCH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--eecCCCCcchHH-HHHHhhhccHHH
Confidence 99999999999999999999999999999999999999999999999999999 8887776 9999 88 78899999
Q ss_pred HHHHHhcCCCCCCCCccc
Q 010851 171 WVVVIPCGTANPSKPLRF 188 (499)
Q Consensus 171 ~~~Ll~~ga~~~~~~~~~ 188 (499)
+++|+++|++.+..+..+
T Consensus 155 ~~~Ll~~~a~~~~~~~~~ 172 (239)
T 1ycs_B 155 SQFLYGVQEKMGIMNKGV 172 (239)
T ss_dssp HHHHHHHHHHTTTTGGGE
T ss_pred HHHHHHhhhcccccccce
Confidence 999999999988765443
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.9e-30 Score=239.27 Aligned_cols=191 Identities=13% Similarity=0.043 Sum_probs=128.4
Q ss_pred HHHHHHcCCCCcccC---CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q 010851 33 IRALRSQGASLEWMD---KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG 109 (499)
Q Consensus 33 v~~Ll~~g~~~~~~d---~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 109 (499)
|+.||++|++++..+ ..|.||||+|+.. |+.+++++|++.|++++.+ |..|+||||+|+..|+.+++++|+++|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALT-GELEVVQQAVKEMNDPSQP--NEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHH-TCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHc-CCHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 456677776665443 3455667777776 7777777777777777776 667777777777777777777777777
Q ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc-ccCCCHHHHHh--hhcCCHHHHHHHHhcCCCCCCCCc
Q 010851 110 ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALA--PQLMSRKIWVVVIPCGTANPSKPL 186 (499)
Q Consensus 110 a~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~Lh~~A--~~~~~~~~~~~Ll~~ga~~~~~~~ 186 (499)
++++.+|..|+||||+|+..|+.+++++|+++|++++ .++ ..|+|||| +| +..++.+++++|+++|++++..+.
T Consensus 78 a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~--~~~~~~g~tpL~-~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 78 ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF--ATTLSDGATAFE-KCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT--CCCSSTTCCTGG-GCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--cccCCCCCCHHH-HHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 7777777777777777777777777777777777776 554 57777777 66 777777777777777777777776
Q ss_pred ccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecCCCcchhHhHhh
Q 010851 187 RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (499)
Q Consensus 187 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~g~tpl~~a~~ 240 (499)
.+.++++....... .+.+...+.+..++..|..|+|||++|+.
T Consensus 155 ~~~~~l~~~~~~~~-----------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~ 197 (229)
T 2vge_A 155 GAVYALWDYSAEFG-----------DELSFREGESVTVLRRDGPEETDWWWAAL 197 (229)
T ss_dssp GEEEESSCBCCSST-----------TBCCBCTTCEEEEEESSCTTCSSEEEEEE
T ss_pred CchHHHHHHhhccc-----------cccCccccccccccccCCCcccHHHHHHH
Confidence 66666664333322 11222223444478899999999999996
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=245.29 Aligned_cols=183 Identities=19% Similarity=0.084 Sum_probs=166.7
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.+..+.+|.|+||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|+++|.+ |..|+||
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~ga~~n~~--d~~g~tp 90 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICG-ANYSIVDFLITAGANVNSP--DSHGWTP 90 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCCH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCCC--CCCCCCH
Confidence 345677899999999999999999999999999999999999999999998 9999999999999999998 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccC-CCCCCHHHHH--HHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRN-DDCHTALGVA--RIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++++ .+|..|.|+++ .++...
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~--~~~~~~~~~l~-~~~~~~ 167 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG--LMNSGAVYALW-DYSAEF 167 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT--TSGGGEEEESS-CBCCSS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc--cccCCchHHHH-HHhhcc
Confidence 999999999999999999999999986 6999999999 99999999999999999999 88999999999 444433
Q ss_pred CHHHHHHHHhcCCC--CCCCCcccccccCccccccCh
Q 010851 167 SRKIWVVVIPCGTA--NPSKPLRFELVIYPSLQDVQP 201 (499)
Q Consensus 167 ~~~~~~~Ll~~ga~--~~~~~~~~~~~l~~~~~~~~~ 201 (499)
..++|++.|++ .+.++..+.++++++...+..
T Consensus 168 ---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 168 ---GDELSFREGESVTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp ---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEE
T ss_pred ---ccccCccccccccccccCCCcccHHHHHHHcCCc
Confidence 23678899998 667788899999999887763
No 67
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=2.1e-29 Score=249.68 Aligned_cols=198 Identities=14% Similarity=-0.014 Sum_probs=164.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcC
Q 010851 19 ELLYQWVIAGDVDAIRALRSQGASLEW-MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (499)
Q Consensus 19 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g 97 (499)
+.+|+|+..+..+++++|++.|+++|. +|..|+||||+||.. |+.++|++||++|++++.+ |..|+||||+|+..|
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~-g~~~~v~~Ll~~Gad~n~~--d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSI-ANLELVKHLVKHGSNRLYG--DNMGESCLVKAVKSV 175 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTBC--CTTCCCHHHHHHHSS
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHhc
Confidence 345888888889999999999999999 899999999999998 9999999999999999998 889999999999999
Q ss_pred C---HHHHHHHHHCC-CCCcccCCCCCCHHHHHHH----cCCHHHHHHHHHc--------------------cccccccc
Q 010851 98 L---EPTVRLLLSCG-ANALVRNDDCHTALGVARI----KGHINVVRAIESH--------------------ICYFCGWL 149 (499)
Q Consensus 98 ~---~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~--------------------g~~~~~~~ 149 (499)
+ .++++.|++.+ ++++.+|..|+||||+|+. .|+.+++++|++. |++++ .
T Consensus 176 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~--~ 253 (327)
T 1sw6_A 176 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN--D 253 (327)
T ss_dssp HHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------------
T ss_pred ccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc--c
Confidence 8 78888888887 7899999999999999999 8999999999987 77777 8
Q ss_pred ccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHHHhhcCCCccCCCCCceeeecC
Q 010851 150 REFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQ 229 (499)
Q Consensus 150 ~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~ 229 (499)
++..|+|||| .|+. +++|+++ +++.++..+++++|++........+..|+.. +++++++|+
T Consensus 254 ~~~~g~t~L~-~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~----------Gad~~~~d~ 314 (327)
T 1sw6_A 254 KNGERKDSIL-ENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDY----------GADPFIANK 314 (327)
T ss_dssp ------CHHH-HHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT----------TCCTTCCCT
T ss_pred ccccCCChhH-HHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc----------CCCCcccCC
Confidence 9999999999 6764 8899998 5788888999999999998887777665543 344788999
Q ss_pred CCcchhHhHhh
Q 010851 230 ATKIRYKFASA 240 (499)
Q Consensus 230 ~g~tpl~~a~~ 240 (499)
.|+||||+|+.
T Consensus 315 ~G~TpL~~A~~ 325 (327)
T 1sw6_A 315 SGLRPVDFGAG 325 (327)
T ss_dssp TSCCGGGGTCC
T ss_pred CCCCHHHHHHh
Confidence 99999999986
No 68
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=7.8e-29 Score=213.04 Aligned_cols=133 Identities=26% Similarity=0.309 Sum_probs=110.1
Q ss_pred cCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCC-C
Q 010851 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR-G 86 (499)
Q Consensus 8 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~-g 86 (499)
.+.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.+ |.. |
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~~~~~--~~~~g 78 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM--GSAQVAELLLLHGAEPNCA--DPATL 78 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT--SCHHHHHHHHHHTCCSSCC--BTTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc--CCHHHHHHHHHCCCCCCCc--CCCCC
Confidence 4667778888888888888888888888888888888888888888888885 7788888888888888877 667 7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8888888888888888888888888888888888888888888888888888888765
No 69
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=4.6e-29 Score=219.77 Aligned_cols=143 Identities=25% Similarity=0.240 Sum_probs=120.7
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCc-H
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT-P 89 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~T-p 89 (499)
+..++.|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+ . |+.+++++|+++|++++.+ |..|+| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~-~~~~~v~~Ll~~g~~~~~~--d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M-GSARVAELLLLHGAEPNCA--DPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T-TCHHHHHHHHTTTCCCCCC--CTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c-CCHHHHHHHHHcCCCCCCc--CCCCCcHH
Confidence 356888999999999999999999999999999999999999999986 5 9999999999999999998 889999 9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHH
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLE 159 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh 159 (499)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.|+.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR--GSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC--ccCcCcCcccc
Confidence 999999999999999999999999999999999999999999999999999999999 89999999887
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3.4e-29 Score=242.17 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=174.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCC-CCCccCCCCCCCcHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGAS--LEWMDKEGKTPLIVACMDSGLINVAKTLIELGA-NINAYRPGGRGGTPLHH 92 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga-~~~~~~~d~~g~TpL~~ 92 (499)
.+.+++|.|+..|+.+.++.|++.+.+ +|.+|..|+||||+|+.. |+.+++++|+++|+ +++.. |..|+||||+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~-g~~~~v~~Ll~~g~~~~~~~--~~~g~tpL~~ 151 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSH-ANFPVVQQLLDSGVCKVDKQ--NRAGYSPIML 151 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTSCCCTTCC--CTTSCCHHHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHC-CCHHHHHHHHHCCCCcCCCC--CCCCCCHHHH
Confidence 345778999999999999999988766 889999999999999998 99999999999998 99998 8999999999
Q ss_pred HH-----HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCC
Q 010851 93 AA-----KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMS 167 (499)
Q Consensus 93 A~-----~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~ 167 (499)
|+ ..++.+++++|++.|++++..|..|+||||+|+..|+.++|++|+++|++++ .+|..|+|||| +|+..++
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n--~~d~~G~TpLh-~A~~~g~ 228 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVN--VQDDDGSTALM-CACEHGH 228 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHHTC
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCCHHH-HHHHCCC
Confidence 99 6688999999999999999999999999999999999999999999999999 99999999999 9999999
Q ss_pred HHHHHHHHh-cCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 168 RKIWVVVIP-CGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 168 ~~~~~~Ll~-~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
.+++++|++ .|++++.++..+.++++++...+....+..|+
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999 89999999999999999999988877776655
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=5e-28 Score=216.44 Aligned_cols=143 Identities=25% Similarity=0.296 Sum_probs=132.3
Q ss_pred ccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 10 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~ 105 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG-GYTDIVGLLLERDVDINIY--DWNGGTP 105 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHTTTCCTTCC--CTTSCCH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCC--CCCCCCH
Confidence 677899999999999999999999999999999999999999999999998 9999999999999999998 8899999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCH
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSF 157 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~ 157 (499)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++++++. .++..|.||
T Consensus 106 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~--~~~~~~~~p 171 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF--QSNLVPADP 171 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS--CC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh--cccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999988 778888776
No 72
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=4.9e-28 Score=208.05 Aligned_cols=134 Identities=18% Similarity=0.225 Sum_probs=129.7
Q ss_pred CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCC-
Q 010851 40 GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDD- 118 (499)
Q Consensus 40 g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~- 118 (499)
+++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+. |+.+++++|+++|++++.+|..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~ 77 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAAR-GQVETVRQLLEAGADPNAL--NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPAT 77 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTT
T ss_pred CCCccCCCCCCccHHHHHHHc-CCHHHHHHHHHcCCCcCCc--CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCC
Confidence 478899999999999999998 9999999999999999998 8899999999999 9999999999999999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCC
Q 010851 119 CHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA 180 (499)
Q Consensus 119 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~ 180 (499)
|+||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|+|
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~tpl~-~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLD--VCDAWGRLPVD-LAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCC--CCSSSSSCHHH-HHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCCHHH-HHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999 99999999999 99999999999999999985
No 73
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.5e-27 Score=217.36 Aligned_cols=160 Identities=21% Similarity=0.151 Sum_probs=151.6
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCH
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTA 122 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp 122 (499)
+|.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 28 ~n~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 104 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACML-GMENAIDKLVENFDKLEDK--DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTP 104 (192)
T ss_dssp HTCCCTTCCCHHHHHHHH-TCGGGHHHHHHHHCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred HhCcCCCCCCHHHHHHHc-CCHHHHHHHHHhccccccc--cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Confidence 567899999999999998 9999999999999999998 8899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChH
Q 010851 123 LGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPR 202 (499)
Q Consensus 123 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~ 202 (499)
||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++.......
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANVN--DRNLEGETPLI-VASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS--CCCTTCCCHHH-HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 999999999999999999999999 99999999999 999999999999999999999999999999999998888776
Q ss_pred HHHHHH
Q 010851 203 AVIALW 208 (499)
Q Consensus 203 ~~~~l~ 208 (499)
.+..+.
T Consensus 182 ~v~~Ll 187 (192)
T 2rfm_A 182 VIKIFT 187 (192)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 74
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.1e-28 Score=224.01 Aligned_cols=159 Identities=14% Similarity=0.048 Sum_probs=142.8
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHHcCCcH----HHHHHHHHcCCCCCccCCCCCCCcHHH
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMD-KEGKTPLIVACMDSGLI----NVAKTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpLh~Aa~~~g~~----~~v~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
+.++||.|++.|+.+.++.++..+. +.++ ..|+||||+|+.+ |+. +++++||++|+++|.+ |..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~-~~~~~~~~iv~~Ll~~Gadvn~~--d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRN-NNDEARYKISMFLINKGADIKSR--TKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTC-SCHHHHHHHHHHHHHTTCCSSCC--CTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHc-CCcchHHHHHHHHHHCCCCCCCC--CCCCCcHHH
Confidence 5688999999999999999999875 4455 7799999999987 654 5999999999999999 899999999
Q ss_pred HHHHcCC------HHHHHHHHHCCCCCcccCCCCC-CHHHHHHHcC-----CHHHHHHHHH-cccccccccccccCCCHH
Q 010851 92 HAAKRGL------EPTVRLLLSCGANALVRNDDCH-TALGVARIKG-----HINVVRAIES-HICYFCGWLREFYGPSFL 158 (499)
Q Consensus 92 ~A~~~g~------~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~~~g~t~L 158 (499)
+|+..++ .+++++|+++|++++.+|..|. ||||+|+..+ +.+++++|++ +|++++ .+|..|+|||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~--~~d~~G~TpL 158 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL--IKDKWGLTAL 158 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT--CCCTTSCCHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc--ccCCCCCCHH
Confidence 9999987 6889999999999999999999 9999999954 4579999999 999999 9999999999
Q ss_pred HHHhhhcCCHHHHHHHHhcCCCCCC
Q 010851 159 EALAPQLMSRKIWVVVIPCGTANPS 183 (499)
Q Consensus 159 h~~A~~~~~~~~~~~Ll~~ga~~~~ 183 (499)
| +|+..++.+++++|++...+.+.
T Consensus 159 ~-~A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 159 E-FVKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp H-HHHTTTCHHHHHHHHHHHHHHTC
T ss_pred H-HHHHcCCHHHHHHHHHHHHHHhc
Confidence 9 99999999999999977654433
No 75
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=4.7e-27 Score=201.89 Aligned_cols=127 Identities=28% Similarity=0.360 Sum_probs=119.5
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
....|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~ 86 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH-GHLEIVEVLLKNGADVNAV--DAIGFTPLHL 86 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTCCCHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcC--CCCCCCHHHH
Confidence 466789999999999999999999999999999999999999999998 9999999999999999998 8899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 142 (499)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999876
No 76
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=9.6e-27 Score=207.67 Aligned_cols=133 Identities=26% Similarity=0.345 Sum_probs=128.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 37 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g 113 (169)
T 2y1l_E 37 GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF-GHLEIVEVLLKNGADVNAN--DMEG 113 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCC
Confidence 567888999999999999999999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 142 (499)
+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 114 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999876
No 77
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=4.1e-27 Score=208.11 Aligned_cols=134 Identities=28% Similarity=0.341 Sum_probs=127.7
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|..|.||||+|+. |+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 28 ~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g 103 (162)
T 1ihb_A 28 NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA-GFLDTLQTLLEFQADVNIE--DNEG 103 (162)
T ss_dssp CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTS
T ss_pred CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCc--CCCC
Confidence 56788899999999999999 999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGAN-ALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 104 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999999998 599999999999999999999999999999985
No 78
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.4e-26 Score=195.22 Aligned_cols=126 Identities=34% Similarity=0.514 Sum_probs=115.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. |+.+++++|+++|++++.+ |..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN-GHLEVVKLLLEAGADVNAK--DKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc-CcHHHHHHHHHcCCCCccc--CCCCCcHHHHHHH
Confidence 588999999999999999999999999999999999999999988 8899999999999999988 7889999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999998875
No 79
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.4e-26 Score=204.42 Aligned_cols=154 Identities=19% Similarity=0.088 Sum_probs=147.0
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHH
Q 010851 49 EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARI 128 (499)
Q Consensus 49 ~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 128 (499)
.|.||||+|+.. |+.+++++|++.|++++.+ |..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~-g~~~~v~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQ-GEMLYLATRIEQENVINHT--DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHT-TCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHC-CCHHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 689999999998 9999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 129 KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 129 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
.|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+..+.
T Consensus 79 ~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVN--EYDWNGGTPLL-YAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIE 155 (167)
T ss_dssp HTCHHHHHHHHHHTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC--cCCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 999999999999999999 89999999999 999999999999999999999999999999999999888877766655
No 80
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=8.7e-27 Score=209.94 Aligned_cols=137 Identities=21% Similarity=0.205 Sum_probs=132.8
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--d~~g 105 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH-GHRDIVQKLLQYKADINAV--NEHG 105 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTS
T ss_pred cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCC
Confidence 456788999999999999999999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++
T Consensus 106 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 106 NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999998
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=8.8e-27 Score=205.12 Aligned_cols=144 Identities=19% Similarity=0.160 Sum_probs=120.9
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCC-
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHT- 121 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t- 121 (499)
.+..+..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+ .|+.+++++|+++|++++.+|..|+|
T Consensus 5 ~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~tt 80 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAAR-GRVEEVRALLEAGANPNAP--NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTR 80 (156)
T ss_dssp -----CCSTTHHHHHHHH-TCHHHHHHHHTTTCCTTCC--CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCC
T ss_pred ccCCCccchHHHHHHHHc-CCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 345678899999999998 9999999999999999998 889999999996 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccC
Q 010851 122 ALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIY 193 (499)
Q Consensus 122 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~ 193 (499)
|||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++..
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~tpl~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLD--VRDAWGRLPVD-LAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSS--CCCTTCCCHHH-HHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCc--ccCCCCCCHHH-HHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 9999999999999999999999999 99999999999 999999999999999999999888766655543
No 82
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=8e-26 Score=198.14 Aligned_cols=149 Identities=21% Similarity=0.208 Sum_probs=139.4
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHc
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIK 129 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 129 (499)
+.|+||+|+.. |+.+++++|+++|++++ . +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~-g~~~~v~~Ll~~g~~~~-~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARA-GQDDEVRILMANGAPFT-T--DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHH-TCHHHHHHHHHHTCCCC-C--CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHc-CCHHHHHHHHHcCCCCC-c--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 46899999998 99999999999999887 3 78999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccChHHHH
Q 010851 130 GHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVI 205 (499)
Q Consensus 130 g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~ 205 (499)
|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++...+....+.
T Consensus 78 ~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 78 GHANIVEVLLKHGADVN--AKDMLKMTALH-WATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp TCHHHHHHHHTTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ChHHHHHHHHHcCCCCC--CCCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999 89999999999 999999999999999999999999999999999888777655443
No 83
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=8.6e-26 Score=198.38 Aligned_cols=130 Identities=25% Similarity=0.369 Sum_probs=125.1
Q ss_pred ccCccccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 7 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
+.+.+.+|..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|
T Consensus 26 ~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--~~~g 101 (156)
T 1bd8_A 26 LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAART-GFLDTLKVLVEHGADVNVP--DGTG 101 (156)
T ss_dssp CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCSCCC--CTTS
T ss_pred CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCCCc--CCCC
Confidence 34788899999999999 999999999999999999999999999999999998 9999999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
+||||+|+..|+.+++++|++. ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999 99999999999999999999999999999975
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=7.8e-27 Score=200.65 Aligned_cols=127 Identities=28% Similarity=0.332 Sum_probs=76.2
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHH
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~ 91 (499)
.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNH-GHLKVVELLLQHKALVNTT--GYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCcccCc--CCCCCCHHH
Confidence 3455666666666666666666666666666666666666666666655 5666666666666666655 555666666
Q ss_pred HHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 010851 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (499)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 141 (499)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 66666666666666666666666666666666666655555555555443
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.8e-25 Score=187.18 Aligned_cols=126 Identities=32% Similarity=0.465 Sum_probs=122.3
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHH
Q 010851 49 EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARI 128 (499)
Q Consensus 49 ~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 128 (499)
+|+||||+|+.. |+.+++++|+++|++++.+ +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARN-GHLEVVKLLLEAGADVNAK--DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHH-TCHHHHHHHHHHTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHc-CcHHHHHHHHHcCCCCCCc--CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Confidence 589999999998 9999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCC
Q 010851 129 KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA 180 (499)
Q Consensus 129 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~ 180 (499)
.|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~--~~~~~g~t~l~-~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVN--AKDKNGRTPLH-LAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCc--ccCCCCCCHHH-HHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999998 89999999999 99999999999999999985
No 86
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.3e-25 Score=197.65 Aligned_cols=149 Identities=21% Similarity=0.199 Sum_probs=137.8
Q ss_pred cCCCCChHHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHH
Q 010851 46 MDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (499)
Q Consensus 46 ~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~ 124 (499)
.|.+|.|+||+|+.. |+.++++.|++. +.+++.. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 4 ~~~~~~~~l~~A~~~-g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 80 (165)
T 3twr_A 4 GNSEADRQLLEAAKA-GDVETVKKLCTVQSVNCRDI--EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLH 80 (165)
T ss_dssp --CHHHHHHHHHHHH-TCHHHHHHHCCTTTTTCCCT--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcchhhHHHHHHHHh-CCHHHHHHHHHcCCCCcccc--ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHH
Confidence 567889999999998 999999999984 5566665 788999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCccccccCh
Q 010851 125 VARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQP 201 (499)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~ 201 (499)
+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++++.++..+.++++++.. ...
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVN--VADLWKFTPLH-EAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHH-HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCH
T ss_pred HHHHcCcHHHHHHHHhCCCCCC--CcCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CCh
Confidence 9999999999999999999999 89999999999 9999999999999999999999999999999999766 443
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=2.2e-26 Score=217.47 Aligned_cols=148 Identities=21% Similarity=0.196 Sum_probs=133.7
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
+..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+.. |+.+++++|+++|+++|.+ |..|+||||+|
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~--d~~g~tpL~~A 110 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA-GHTEIVKFLVQFGVNVNAA--DSDGWTPLHCA 110 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH-TCHHHHHHHHHHTCCTTCC--CTTCCCHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCCCCHHHHH
Confidence 46789999999999999999999999999999999999999999998 9999999999999999999 88999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCC-CHHHHH--HHcCCHHHHHHHHHcccccccccc---------cccCCCHHHHH
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCH-TALGVA--RIKGHINVVRAIESHICYFCGWLR---------EFYGPSFLEAL 161 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A--~~~g~~~~v~~Ll~~g~~~~~~~~---------~~~g~t~Lh~~ 161 (499)
+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++|++++ .. +..+.++++ +
T Consensus 111 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~--~~~~~~~~al~d~~~~~~~e-L 187 (239)
T 1ycs_B 111 ASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG--IMNKGVIYALWDYEPQNDDE-L 187 (239)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT--TTGGGEEEESSCBCCSSTTB-C
T ss_pred HHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc--ccccceEEEEeccCCCCCCc-c
Confidence 999999999999999999999998877 999999 78899999999999999887 43 556777777 5
Q ss_pred hhhcCC
Q 010851 162 APQLMS 167 (499)
Q Consensus 162 A~~~~~ 167 (499)
+...|.
T Consensus 188 a~~~G~ 193 (239)
T 1ycs_B 188 PMKEGD 193 (239)
T ss_dssp CBCSSC
T ss_pred cccCCC
Confidence 655554
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.7e-25 Score=192.04 Aligned_cols=127 Identities=20% Similarity=0.236 Sum_probs=120.4
Q ss_pred cCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 010851 46 MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGV 125 (499)
Q Consensus 46 ~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~ 125 (499)
....|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 10 ~~~~~~t~l~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 10 HGSDLGKKLLEAARA-GQDDEVRILMANGADVNAK--DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHL 86 (136)
T ss_dssp --CHHHHHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccccccHHHHHHHHh-CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHH
Confidence 345688999999998 9999999999999999998 8899999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcC
Q 010851 126 ARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (499)
Q Consensus 126 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~g 178 (499)
|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~tpl~-~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVN--AQDKFGKTAFD-ISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcCCCCc--CcCCCCCCHHH-HHHHCCCHHHHHHHHHcC
Confidence 999999999999999999998 89999999999 999999999999999876
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=5e-26 Score=195.57 Aligned_cols=133 Identities=22% Similarity=0.263 Sum_probs=120.8
Q ss_pred CCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCC
Q 010851 40 GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDC 119 (499)
Q Consensus 40 g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 119 (499)
|+|+ .+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 76 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIK-GDIPSVEYLLQNGSDPNVK--DHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGG
T ss_pred CCCC-CcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCC
Confidence 5677 7889999999999998 9999999999999999998 8899999999999999999999999999999999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCC
Q 010851 120 HTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGT 179 (499)
Q Consensus 120 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga 179 (499)
.||||+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..+..+++++|.+.+.
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~tpl~-~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIVKLLLSYGASRN--AVNIFGLRPVD-YTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCGGG-GCCCHHHHHHHSCC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-HHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999 99999999999 9999999999887776654
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.5e-25 Score=202.73 Aligned_cols=142 Identities=21% Similarity=0.178 Sum_probs=131.2
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
.+..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.. |+.+++++|+++|++++.++ +..|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~~-~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRD-MRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCCC-SSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcCC-CCCCCCHHHH
Confidence 46789999999999999999999999 999999999999999999998 99999999999999999883 3889999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+..|+.+++++|+++|++++.+|..|.||||+|+..+ ....+.++|+ +|+..++.++++
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-------------------~~~~~~~~l~-~a~~~~~~~i~~ 176 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL-------------------KTTPKGNPMQ-FGRRIGLEKVIN 176 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH-------------------HTCCCCSHHH-HHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc-------------------cCcccccHHH-HHHHcCHHHHHH
Confidence 99999999999999999999999999999999998742 2345789999 999999999999
Q ss_pred HHHhc
Q 010851 173 VVIPC 177 (499)
Q Consensus 173 ~Ll~~ 177 (499)
+|.++
T Consensus 177 ~L~~~ 181 (183)
T 3deo_A 177 VLEGQ 181 (183)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 99765
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.6e-25 Score=212.35 Aligned_cols=145 Identities=21% Similarity=0.181 Sum_probs=133.8
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
.+.+|.||||+|+..|+.++|++|++ |+++|.+|..|+||||+|+.. |+.+++++|+++|+++|.++ +..|+||||+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~~-~~~g~t~L~~ 117 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRD-MRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHH-TCHHHHHHHHHTTCCTTCCC-SSSCCCHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCcCC-CCCCCCHHHH
Confidence 45689999999999999999999999 999999999999999999998 99999999999999999983 3789999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~ 172 (499)
|+..|+.++|++|+++|++++.+|..|.||||+|+.. .....+.|||| +|+..++.++++
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~-------------------~~~~~~~~~l~-~a~~~g~~~iv~ 177 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREI-------------------LKTTPKGNPMQ-FGRRIGLEKVIN 177 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH-------------------HTTCCCSSHHH-HHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH-------------------HhccCCCCHHH-HHHHcChHHHHH
Confidence 9999999999999999999999999999999999862 23457899999 999999999999
Q ss_pred HHHhcCCC
Q 010851 173 VVIPCGTA 180 (499)
Q Consensus 173 ~Ll~~ga~ 180 (499)
+|++++.+
T Consensus 178 ~L~~~~~~ 185 (244)
T 3ui2_A 178 VLEGQVFE 185 (244)
T ss_dssp HHHHHHEE
T ss_pred HHHHhccc
Confidence 99987654
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=2.1e-26 Score=208.95 Aligned_cols=135 Identities=20% Similarity=0.210 Sum_probs=122.5
Q ss_pred CccccC-CCchHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCChHHHHHHHcCCc------HHHHHHHHHcCCCC
Q 010851 9 NQHQQR-QSKDELLYQWVIAGDV----DAIRALRSQGASLEWMDKEGKTPLIVACMDSGL------INVAKTLIELGANI 77 (499)
Q Consensus 9 ~~~~~d-~~g~t~L~~Aa~~g~~----~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~------~~~v~~Ll~~ga~~ 77 (499)
+.+.++ ..|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+.. |+ .+++++|+++|+++
T Consensus 29 ~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~-~~~~~~~~~~iv~~Ll~~Gadi 107 (186)
T 3t8k_A 29 GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG-GGNDITGTTELCKIFLEKGADI 107 (186)
T ss_dssp SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH-CTTCHHHHHHHHHHHHHTTCCS
T ss_pred CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc-CCcchhhHHHHHHHHHHCCCCC
Confidence 345555 7799999999999985 599999999999999999999999999998 65 68999999999999
Q ss_pred CccCCCCCCC-cHHHHHHHcC-----CHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 78 NAYRPGGRGG-TPLHHAAKRG-----LEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 78 ~~~~~d~~g~-TpL~~A~~~g-----~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
|.+ |..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|.||||+|++.|+.++|++|+++....+
T Consensus 108 n~~--d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 108 TAL--YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp SSC--BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred Ccc--CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999 88999 9999999954 4579999999 999999999999999999999999999999999876665
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=4.2e-26 Score=212.88 Aligned_cols=132 Identities=25% Similarity=0.308 Sum_probs=97.6
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCCCCcHH
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPL 90 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~TpL 90 (499)
.++.+|.||||+|+..|+.++|++|++.|++++.+|..|+||||+||.. |+.+++++|+++ |++++.+ |..|+|||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~g~~~~~~--d~~g~tpL 144 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHG-GHKDIVEMLFTQPNIELNQQ--NKLGDTAL 144 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHTTSTTCCCCCC--CTTSCCHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHcCCCCCcccc--CCCCCCHH
Confidence 3456677888888888888888888888888888888888888888876 778888888877 7888877 77788888
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 91 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
|+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.++++.|++.++...
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 88888888888888888888888888888888888888888888888887777665
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=2.6e-25 Score=187.41 Aligned_cols=112 Identities=29% Similarity=0.334 Sum_probs=99.2
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHH
Q 010851 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (499)
Q Consensus 14 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A 93 (499)
+..|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~--d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC-GQLEILEFLLLKGADINAP--DKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHT-TCHHHHHHHHTTTCCTTCC--CTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCcC--CCCCCCHHHHH
Confidence 56788999999999999999999999999999999999999999987 8899999999999999988 78899999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHH
Q 010851 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARI 128 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 128 (499)
+..|+.+++++|+++|++++.+|..|.||||+|..
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999999999999999999999843
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=6.7e-25 Score=214.50 Aligned_cols=143 Identities=20% Similarity=0.162 Sum_probs=123.1
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCChHHHHHHHc--CCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 15 QSKDELLYQWVIAGDVDAIRALRSQGASLEW------MDKEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 15 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~------~d~~g~TpLh~Aa~~--~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
..+.++||.|+..|+.+.|+.|++.|++++. .|..|+||||+|+.. .|+.+++++|+++|+++|.+ |..|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~--d~~G 226 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK--AADG 226 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCC--CTTC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCC--CCCC
Confidence 3456889999999999999999999999988 688999999999985 27899999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcC
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~ 166 (499)
+||||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.|||| +|+.+|
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh-~A~~~g 297 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLH-VDYSWV 297 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhH-HHHhcC
Confidence 9999999999999999999999999999999999999999999999999999998865 4789999 888777
Q ss_pred CH
Q 010851 167 SR 168 (499)
Q Consensus 167 ~~ 168 (499)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 53
No 96
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=1.1e-26 Score=233.35 Aligned_cols=160 Identities=14% Similarity=0.036 Sum_probs=136.6
Q ss_pred ccCCCchHHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCC---CccCCCCC
Q 010851 12 QQRQSKDELLYQWVIAGDVDAIRALRSQGASL---EWMDKEGKTPLIVACMDSGLINVAKTLIELGANI---NAYRPGGR 85 (499)
Q Consensus 12 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~---~~~~~d~~ 85 (499)
.++.+++||||+|+..|+.++|++|+++|+.. +..|..|.||||+||.+ |+.++|++|+++|+++ +.. +.+
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~-G~~eiv~~Ll~~gad~~~~~i~--~~~ 163 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN-GHLHVLNRLCELAPTEIMAMIQ--AEN 163 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT-TCHHHHHHHHHSCTTTHHHHHS--HHH
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc-CCHHHHHHHHhCCCCccccccC--CCC
Confidence 35667889999999999999999999999832 23455788999999998 9999999999999863 332 222
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCcc--cCCCCCCHHHHHH-HcCCHHHHHHHHHcccccccccccccCCCHHHHHh
Q 010851 86 GGTPLHHAAKRGLEPTVRLLLSCGANALV--RNDDCHTALGVAR-IKGHINVVRAIESHICYFCGWLREFYGPSFLEALA 162 (499)
Q Consensus 86 g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~tpL~~A~-~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A 162 (499)
+||||+|+..|+.++|++|+++|++++. .|..|.||||+|+ ..|+.++|++|+++|+ .|.|||| +|
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---------~~~taL~-~A 232 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV---------MLAYAEI-HE 232 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH---------HHHHHHH-CT
T ss_pred -CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC---------ccchHHH-HH
Confidence 8999999999999999999999999887 8889999999999 9999999999999774 2789999 99
Q ss_pred hhcCCHHHHHHHHhcCCCCCCCC
Q 010851 163 PQLMSRKIWVVVIPCGTANPSKP 185 (499)
Q Consensus 163 ~~~~~~~~~~~Ll~~ga~~~~~~ 185 (499)
+..|+.+++++|+++|++.+..+
T Consensus 233 a~~g~~evv~lL~~~ga~~~~~~ 255 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNRLKEMH 255 (376)
T ss_dssp TTTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCccccccc
Confidence 99999999999999998765443
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=8.8e-24 Score=211.54 Aligned_cols=148 Identities=21% Similarity=0.297 Sum_probs=121.5
Q ss_pred cCCCchHHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 13 QRQSKDELLYQWVIA-GDVDAIRALRSQGASLEWMD--KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~d--~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.+..+.|+||+|+.. |++++|++||++|+++|..| ..|.||||+|+.. |+.+++++|+++|+++|.+ |..|+||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~-g~~~iv~~LL~~Gadvn~~--d~~G~Tp 271 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAA-NSLLACEFLLQNGANVNQA--DSAGRGP 271 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCC--CCCCCCH
Confidence 445678999999999 99999999999999999998 8999999999997 9999999999999999998 8999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc-cccccccCCCHHHHHhhh
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC-GWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~~g~t~Lh~~A~~ 164 (499)
||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+..+.... ....+..+.|+++ ++..
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~-i~~~ 346 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLD-IFRD 346 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHH-HHHH
Confidence 999999999999999999999999999999999999999999999999998874322 1245677888888 4443
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1.8e-24 Score=201.80 Aligned_cols=135 Identities=17% Similarity=0.134 Sum_probs=117.5
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCcccCCCCCCHH
Q 010851 45 WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC-GANALVRNDDCHTAL 123 (499)
Q Consensus 45 ~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL 123 (499)
..+..|.||||+||.. |+.+++++|++.|++++.+ |..|+||||+|+..|+.++|++|++. |++++.+|..|+|||
T Consensus 68 ~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKR-GNLSWLRECLDNRVGVNGL--DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHEEEESCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred cccccccccccccccc-CcHHHHHHHHhCCCCcccc--CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 3466789999999998 9999999999999999998 88999999999999999999999999 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCC
Q 010851 124 GVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKP 185 (499)
Q Consensus 124 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~ 185 (499)
|+|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.++++.|+..|++....+
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTD--LRNIEKKLAFD-MATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSC--CCCTTSCCHHH-HCCSHHHHHHHC-------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCc--cccCCCCCHHH-HhcchhHHHHHHHHhccchhhhccc
Confidence 99999999999999999999999 99999999999 9999999999999999999876554
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=6.4e-24 Score=178.80 Aligned_cols=113 Identities=22% Similarity=0.225 Sum_probs=105.7
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 010851 47 DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVA 126 (499)
Q Consensus 47 d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 126 (499)
+..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~-~~~~~v~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKN-GDLDEVKDYVAKGEDVNRT--LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHT-TCHHHHHHHHHTTCCTTSC--CTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHc-CCHHHHHHHHHcCCCcCcc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 46789999999998 9999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhc
Q 010851 127 RIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (499)
Q Consensus 127 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~ 165 (499)
+..|+.+++++|+++|++++ .+|..|+|||| +|...
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~-~A~~~ 116 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKT--VKGPDGLTAFE-ATDNQ 116 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HCCCH
T ss_pred HHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HhCCH
Confidence 99999999999999999998 99999999999 77443
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2e-23 Score=218.50 Aligned_cols=128 Identities=21% Similarity=0.207 Sum_probs=117.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccc------CCCCChHHHHHHH---cCCcHHHHHHHHHcCCCCCccCCCCCC
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWM------DKEGKTPLIVACM---DSGLINVAKTLIELGANINAYRPGGRG 86 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~------d~~g~TpLh~Aa~---~~g~~~~v~~Ll~~ga~~~~~~~d~~g 86 (499)
...+.||.|+..|+.+.|+.||++|+++|.. |..|+||||+||. . |+.+++++||++|+++|.+ |..|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~-g~~~~v~~Ll~~ga~vn~~--d~~g 207 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQ-ASLPLVDFIIQNGGHLDAK--AADG 207 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCT-TTHHHHHHHHHHSCCTTCC--CSSS
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhccc-ccHHHHHHHHHcCCCCCcc--CCCC
Confidence 3457899999999999999999999999887 8899999999976 5 8899999999999999998 8899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 010851 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (499)
Q Consensus 87 ~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 146 (499)
+||||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999988
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2e-22 Score=194.72 Aligned_cols=125 Identities=19% Similarity=0.222 Sum_probs=83.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCc------ccCCCCChHHHHHHHcC--CcHHHHHHHHHcCCCCCccCCCCCCCcH
Q 010851 18 DELLYQWVIAGDVDAIRALRSQGASLE------WMDKEGKTPLIVACMDS--GLINVAKTLIELGANINAYRPGGRGGTP 89 (499)
Q Consensus 18 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------~~d~~g~TpLh~Aa~~~--g~~~~v~~Ll~~ga~~~~~~~d~~g~Tp 89 (499)
.++|+.|+..|+.+.++.+++.|++++ ..|..|+||||+|+..+ |+.+++++|+++|+++|.+ |..|+||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~--d~~g~Tp 208 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ--TGKGSTA 208 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCC--CTTCCCH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcccc--CCCCCCH
Confidence 456666777777777666666666633 33566667777776653 4566677777777766666 5666677
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 010851 90 LHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (499)
Q Consensus 90 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 144 (499)
||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7777777777777777777777666666677777777777777777777666654
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=3.8e-25 Score=200.04 Aligned_cols=115 Identities=27% Similarity=0.234 Sum_probs=108.3
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccC-CCCCCHHHH
Q 010851 47 DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN-DDCHTALGV 125 (499)
Q Consensus 47 d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~ 125 (499)
+..|.||||+|+.. |+.+++++|++ |++++.+ |..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+
T Consensus 41 ~~~g~t~L~~A~~~-g~~~~v~~Ll~-~~~~~~~--d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARK-ADEQALSQLLE-DRDVDAV--DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHTT-TSCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHc-CCHHHHHHHHh-cCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 56889999999998 99999999999 9999998 8899999999999999999999999999999998 899999999
Q ss_pred HHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCH
Q 010851 126 ARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSR 168 (499)
Q Consensus 126 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~ 168 (499)
|+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~--~~d~~g~tpl~-~A~~~~~~ 156 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIE--VEDERGLTALE-LAREILKT 156 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTT--CCCTTSCCHHH-HHHHHHHT
T ss_pred HHhcCcHHHHHHHHHcCCCCc--CCCCCCCCHHH-HHHHhccC
Confidence 999999999999999999999 99999999999 88765443
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=3.6e-22 Score=195.14 Aligned_cols=174 Identities=13% Similarity=0.058 Sum_probs=141.3
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCC------CCc----------------------ccCCCCChHHHHHHHcCCcH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGA------SLE----------------------WMDKEGKTPLIVACMDSGLI 64 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~------~~~----------------------~~d~~g~TpLh~Aa~~~g~~ 64 (499)
.|....+.|..+...|+. .++.+++... .+. .....+.++||.|+.. |+.
T Consensus 87 lD~w~~~~l~~~~~~GN~-~~n~i~E~~l~~~~~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~~~~~~~L~~A~~~-g~~ 164 (301)
T 2b0o_E 87 LDLLGPSELLLALNMGNT-SFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICN-RDL 164 (301)
T ss_dssp TSCCCHHHHHHHHHCCHH-HHHHHHTTTCCSSSCSCCCTTCCHHHHHHHHHHHHTSCTTSCCCC-CHHHHHHHHHT-TCH
T ss_pred cCCCCHHHHHHHHHcCCH-HHHHHHHHhhhhccCCCCCCcccHHHHHHHHHHHHHhhhhhcccCchHHHHhhhhhc-cCH
Confidence 455667788888887776 3344444321 110 0111234679999998 999
Q ss_pred HHHHHHHHcCCCCCc------cCCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHH
Q 010851 65 NVAKTLIELGANINA------YRPGGRGGTPLHHAAKR---GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVV 135 (499)
Q Consensus 65 ~~v~~Ll~~ga~~~~------~~~d~~g~TpL~~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v 135 (499)
+.++.|++.|++++. . +..|+||||+|+.. |+.+++++|+++|++++.+|..|+||||+|+..|+.++|
T Consensus 165 ~~v~~ll~~g~d~~~~~~~~~~--~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v 242 (301)
T 2b0o_E 165 LSVLEAFANGQDFGQPLPGPDA--QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL 242 (301)
T ss_dssp HHHHHHHHTTCCTTSCEECSSS--CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCCcccccCCCccc--CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999997 4 78999999999997 899999999999999999999999999999999999999
Q ss_pred HHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccccCcccccc
Q 010851 136 RAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV 199 (499)
Q Consensus 136 ~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~ 199 (499)
++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++. +.++++++...+
T Consensus 243 ~~Ll~~gad~~--~~d~~G~TpL~-~A~~~~~~~iv~~Ll~~ga~~------g~tpLh~A~~~g 297 (301)
T 2b0o_E 243 KLLLKGRALVG--TVNEAGETALD-IARKKHHKECEELLEQAQAGT------FAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHTTCCCS--CCCTTSCCHHH-HHHHHTCHHHHHHHHHHHHHT------TSSCCC------
T ss_pred HHHHHcCCCCC--CcCCCCCCHHH-HHHHcCCHHHHHHHHHhcCCC------CCChhHHHHhcC
Confidence 99999999999 99999999999 999999999999999999873 567777766443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=9e-22 Score=190.08 Aligned_cols=167 Identities=12% Similarity=-0.013 Sum_probs=140.9
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCC-----CCcc--------------------------cCCCCChHHHHHHH
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGA-----SLEW--------------------------MDKEGKTPLIVACM 59 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-----~~~~--------------------------~d~~g~TpLh~Aa~ 59 (499)
-..|..+.+.|+++...|+..+.+++...-. .+.. .+....++|+.|+.
T Consensus 60 ~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~ 139 (278)
T 1dcq_A 60 LTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK 139 (278)
T ss_dssp TTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhh
Confidence 3468889999999999999776665532110 0000 00112368999998
Q ss_pred cCCcHHHHHHHHHcCCCCCcc----CCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCH
Q 010851 60 DSGLINVAKTLIELGANINAY----RPGGRGGTPLHHAAKR---GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI 132 (499)
Q Consensus 60 ~~g~~~~v~~Ll~~ga~~~~~----~~d~~g~TpL~~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~ 132 (499)
. |+.+.++.|++.|++++.. ..|..|+||||+|+.. |+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 140 ~-~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~ 218 (278)
T 1dcq_A 140 T-RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNA 218 (278)
T ss_dssp T-TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred h-cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCH
Confidence 7 9999999999999995532 1267899999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCC
Q 010851 133 NVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTAN 181 (499)
Q Consensus 133 ~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~ 181 (499)
++|++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++.
T Consensus 219 ~~v~~Ll~~gad~~--~~d~~g~tpL~-~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 219 ECLKLLLRGKASIE--IANESGETPLD-IAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCC--CccCCCCCHHH-HHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999 99999999999 999999999999999999864
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.7e-22 Score=160.03 Aligned_cols=91 Identities=38% Similarity=0.558 Sum_probs=50.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHc
Q 010851 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (499)
Q Consensus 17 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~ 96 (499)
|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~--d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN-GHLEVVKLLLEAGADVNAK--DKNGRTPLHLAARN 78 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCCCCHHHHHHHc
Confidence 45555555555555555555555555555555555555555554 5555555555555555555 45555555555555
Q ss_pred CCHHHHHHHHHCCC
Q 010851 97 GLEPTVRLLLSCGA 110 (499)
Q Consensus 97 g~~~~v~~Ll~~ga 110 (499)
|+.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 55555555555554
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=5.7e-22 Score=158.14 Aligned_cols=93 Identities=39% Similarity=0.608 Sum_probs=84.3
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHH
Q 010851 49 EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARI 128 (499)
Q Consensus 49 ~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 128 (499)
+|+||||+|+.. |+.+++++|+++|+++|.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~n~~--d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARN-GHLEVVKLLLEAGADVNAK--DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHc-CCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 488999999988 8899999999999999988 8899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcccc
Q 010851 129 KGHINVVRAIESHICY 144 (499)
Q Consensus 129 ~g~~~~v~~Ll~~g~~ 144 (499)
.|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999998874
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.6e-22 Score=168.05 Aligned_cols=107 Identities=30% Similarity=0.410 Sum_probs=68.5
Q ss_pred cCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHH
Q 010851 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (499)
Q Consensus 13 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~ 92 (499)
+|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKN-GHAEIVKLLLAKGADVNAR--SKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTT-TCHHHHHHHTTTTCCTTCC--CTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCccc--CCCCCCHHHH
Confidence 456666666666666666666666666666666666666666666655 6666666666666666665 5566666666
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCH
Q 010851 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTA 122 (499)
Q Consensus 93 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp 122 (499)
|+..|+.+++++|+++|++++.++..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666666666666555
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=4.6e-23 Score=207.04 Aligned_cols=174 Identities=11% Similarity=0.034 Sum_probs=142.9
Q ss_pred CchHHHHHHHH-cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCcc-CCCCCCCcHHHHH
Q 010851 16 SKDELLYQWVI-AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAY-RPGGRGGTPLHHA 93 (499)
Q Consensus 16 ~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~-~~d~~g~TpL~~A 93 (499)
.+.+.+++|.. .++.+++++|+++|.+. .||||+||.. |+.+++++|+++|+..... +.+..|.||||+|
T Consensus 64 ~~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~-G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A 135 (376)
T 2aja_A 64 RQLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAIT-GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 135 (376)
T ss_dssp HHHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHH-CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHc-CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH
Confidence 35678888877 58889999999987654 4999999998 9999999999999832111 1145688999999
Q ss_pred HHcCCHHHHHHHHHCCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHccccccccc--ccccCCCHHHHHhh-hcCC
Q 010851 94 AKRGLEPTVRLLLSCGANA---LVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWL--REFYGPSFLEALAP-QLMS 167 (499)
Q Consensus 94 ~~~g~~~~v~~Ll~~ga~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~~~g~t~Lh~~A~-~~~~ 167 (499)
+..|+.++|++|+++|+++ +..+.+ .||||+|+..|+.++|++|+++|++++ . +|..|+|||| +|+ ..|+
T Consensus 136 a~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~--~~~~d~~g~TpL~-~Aa~~~G~ 211 (376)
T 2aja_A 136 AENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA--TAMIQAENYYAFR-WAAVGRGH 211 (376)
T ss_dssp HHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH--HHHHHHHHHHHHH-HHHSTTCC
T ss_pred HHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc--hhccCCCCCCHHH-HHHHHCCC
Confidence 9999999999999999862 333333 899999999999999999999999987 5 8899999999 999 9999
Q ss_pred HHHHHHHHhcCCCCCCCCcccccccCccccccChHHHHHHH
Q 010851 168 RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (499)
Q Consensus 168 ~~~~~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 208 (499)
.+++++|+++|+ .+.++++.+...+....+..+.
T Consensus 212 ~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 212 HNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred HHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHH
Confidence 999999999875 3788898888887776555444
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.4e-21 Score=204.39 Aligned_cols=138 Identities=14% Similarity=0.117 Sum_probs=119.1
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHcCCCCCcc----CCCCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCcccCCCCCCH
Q 010851 50 GKTPLIVACMDSGLINVAKTLIELGANINAY----RPGGRGGTPLHHAAK---RGLEPTVRLLLSCGANALVRNDDCHTA 122 (499)
Q Consensus 50 g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~----~~d~~g~TpL~~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~tp 122 (499)
..+.||.|+.. |+.++++.||+.|+++|.. +.|..|+||||+|+. .|+.++|++||++|++++.+|..|+||
T Consensus 132 ~~~~L~~A~~~-g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICN-RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHH-TCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhc-cCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 34789999998 9999999999999999865 236789999999977 899999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCCCCCCCcccccc
Q 010851 123 LGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELV 191 (499)
Q Consensus 123 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~ 191 (499)
||+|+..|+.++|++|+++|++++ .+|..|+|||| +|+..++.+++++|+++|++.+.++.+..+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~--~~d~~g~tpl~-~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVG--TVNEAGETALD-IARKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCS--CCCTTCCCHHH-HHHHTTCHHHHHHHHHTCC------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHH-HHHHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 999999999999999999999999 99999999999 9999999999999999999998877655444
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=7.6e-22 Score=163.88 Aligned_cols=109 Identities=34% Similarity=0.499 Sum_probs=102.2
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHH
Q 010851 45 WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (499)
Q Consensus 45 ~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~ 124 (499)
.+|.+|+||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 4 ~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~--d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKN-GHAEEVKKLLSKGADVNAR--SKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHH-TCHHHHHHHTTTTCCSSCC--CSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 5789999999999998 9999999999999999998 889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcccccccccccccCCCHH
Q 010851 125 VARIKGHINVVRAIESHICYFCGWLREFYGPSFL 158 (499)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~L 158 (499)
+|+..|+.+++++|+++|++++ .++..|.+|-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n--~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVN--ARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHH--HHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCC--cCCccccccc
Confidence 9999999999999999999999 8898898874
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=3.8e-21 Score=192.41 Aligned_cols=131 Identities=19% Similarity=0.141 Sum_probs=121.2
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 010851 47 DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVA 126 (499)
Q Consensus 47 d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 126 (499)
+..+.|+||+|+...|+.+++++|+++|+++|..+.+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34567899999975488999999999999999984338999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHHHhcCCC
Q 010851 127 RIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA 180 (499)
Q Consensus 127 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~Ll~~ga~ 180 (499)
+..|+.+++++|+++|++++ .+|..|+|||| +|+..++.+++++|+..+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~--~~d~~G~TpL~-~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLG--ARDSEGRDPLT-IAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHH-HHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHCcCCCC--CcCCCCCCHHH-HHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999 99999999999 99999999999999988854
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=2.1e-21 Score=183.90 Aligned_cols=139 Identities=24% Similarity=0.144 Sum_probs=120.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
.+.+++++++..|+.+.++.+...+.+ .+..|.||||+|+.. |+.+++++|++ |+++|.+ |..|+||||+|+.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~---~~~~g~t~L~~A~~~-g~~~~v~~Ll~-~~~~~~~--d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARK-ADEQALSQLLE-DRDVDAV--DENGRTALLFVAG 86 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHH---HHHHHHHHHHHHHTT-TCHHHHHHTTT-TCCTTCB--CTTSCBHHHHHHH
T ss_pred CCccHHHHHHHcCCCcccccccccccc---cccCCCCHHHHHHHc-CCHHHHHHHHc-CCCCCCc--CCCCCCHHHHHHH
Confidence 445566666666666655554444433 345789999999987 99999999999 9999998 8899999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcccccccccccccCCCHHHHHhhh
Q 010851 96 RGLEPTVRLLLSCGANALVRN-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~ 164 (499)
.|+.++|++|+++|++++.++ ..|+||||+|+..|+.++|++|+++|++++ .+|..|+|||| +|+.
T Consensus 87 ~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--~~d~~g~t~l~-~A~~ 153 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE--VEDERGLTALE-LARE 153 (244)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHH-HHHH
T ss_pred CCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCcHHH-HHHH
Confidence 999999999999999999998 889999999999999999999999999999 99999999999 7764
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=4e-19 Score=146.32 Aligned_cols=92 Identities=30% Similarity=0.414 Sum_probs=63.1
Q ss_pred cccCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHH
Q 010851 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPL 90 (499)
Q Consensus 11 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL 90 (499)
...|.+|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ |..|+|||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll~~ga~~~~~--d~~g~tpl 94 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARN-GHLEVVKLLLEAGADVXAQ--DKFGKTAF 94 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC--CTTSCCHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccc--ccCCCcHH
Confidence 44566677777777777777777777777777777777777777777765 6677777777777777766 66677777
Q ss_pred HHHHHcCCHHHHHHH
Q 010851 91 HHAAKRGLEPTVRLL 105 (499)
Q Consensus 91 ~~A~~~g~~~~v~~L 105 (499)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 777777777777665
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=7.9e-19 Score=144.53 Aligned_cols=93 Identities=27% Similarity=0.369 Sum_probs=82.7
Q ss_pred CcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCH
Q 010851 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTA 122 (499)
Q Consensus 43 ~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp 122 (499)
+...|.+|.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 17 ~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~i~~~--d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARA-GQDDEVRILMANGADVAAK--DKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTA 93 (110)
T ss_dssp -----CCHHHHHHHHHHH-TCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ccccCCccchHHHHHHHc-CCHHHHHHHHHcCCCCCcc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcH
Confidence 345678899999999998 8999999999999999988 8899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 010851 123 LGVARIKGHINVVRAI 138 (499)
Q Consensus 123 L~~A~~~g~~~~v~~L 138 (499)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999887
No 115
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.41 E-value=7.1e-14 Score=102.15 Aligned_cols=56 Identities=34% Similarity=0.823 Sum_probs=51.0
Q ss_pred CccccccccccCCceEEe--CCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 444 SSSSCVICWEAPVEGACV--PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~--pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
++..|.||++.+.+++++ ||||.++|..|+.+++.....||+||++|..++++|..
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~~ 64 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 64 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEECC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeeecC
Confidence 346999999999999998 99999669999999998777899999999999999963
No 116
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.41 E-value=7.6e-14 Score=101.64 Aligned_cols=55 Identities=27% Similarity=0.817 Sum_probs=50.0
Q ss_pred ccccccccccCCceEEe--CCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 445 SSSCVICWEAPVEGACV--PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~--pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
...|.||++.+.+++++ ||||.++|..|+.+++...+.||+||++|..+++||.+
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~s 63 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA 63 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEEEC
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEecC
Confidence 46999999999999888 99999669999999997777899999999999999974
No 117
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=5.9e-13 Score=98.34 Aligned_cols=53 Identities=28% Similarity=0.734 Sum_probs=47.0
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 498 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~ 498 (499)
..+...|.||++.+.+++++||||.++|..|+..+. .||+||.+|..+++||.
T Consensus 12 ~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~----~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 12 EENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCRQFVQESFALSG 64 (68)
T ss_dssp CCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCS----SCTTTCCCCCCEECCCS
T ss_pred CCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhcCC----CCCCCCcchhceEEeec
Confidence 344579999999999999999999955999999765 49999999999999985
No 118
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.17 E-value=5.9e-12 Score=95.98 Aligned_cols=51 Identities=33% Similarity=0.978 Sum_probs=46.2
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeee
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 498 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~ 498 (499)
+...|.||++.+.+++++||||.++|..|+..++. ||+||.+|..++++|.
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~----CP~Cr~~i~~~~~i~~ 67 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQS----CPVCRSRVEHVQHVYL 67 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSB----CTTTCCBCCEEEECBC
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCc----CCCCCchhhCeEEEEe
Confidence 34689999999999999999999559999998864 9999999999999985
No 119
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.12 E-value=1.5e-11 Score=92.61 Aligned_cols=52 Identities=29% Similarity=0.750 Sum_probs=45.9
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
+...|.||++.+.+++++||||..+|..|+..+. .||+||.+|...+++|.+
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~----~CP~Cr~~i~~~~~i~~S 74 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVD----KCPMCYTVITFKQKILMS 74 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCS----BCTTTCCBCSEEEECBC-
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCc----cCCCcCcCccCcEEEeeC
Confidence 4468999999999999999999933999999884 599999999999999864
No 120
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=2.8e-11 Score=91.49 Aligned_cols=52 Identities=29% Similarity=0.783 Sum_probs=45.7
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
+...|.||++.+.+++++||||.++|..|+.++. .||+||.+|...++||.+
T Consensus 24 ~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~----~CP~Cr~~i~~~~~i~~S 75 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVD----KCPMCYTVITFKQKIFMS 75 (75)
T ss_dssp HHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCS----BCTTTCCBCCCCCBCCCC
T ss_pred CCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCC----CCccCCceecCcEEEecC
Confidence 3468999999999999999999933999998764 499999999999999964
No 121
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1e-10 Score=87.45 Aligned_cols=49 Identities=27% Similarity=0.670 Sum_probs=43.9
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+...|.||++.+.+++.+||||.| |..|+..|......||+||..|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVF-CYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEE-EHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCCccCCcccCCCEEccCCCHH-HHHHHHHHHHCCCcCcCcCchhCH
Confidence 3446999999999999999999999 999999988777889999999863
No 122
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.3e-10 Score=86.57 Aligned_cols=54 Identities=22% Similarity=0.691 Sum_probs=46.7
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEee
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~ 497 (499)
..+...|.||++.+.+ +.+||||.| |..|+.+|......||+||..+.....+|
T Consensus 12 ~~~~~~C~IC~~~~~~-~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 65 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD-LILPCAHSF-CQKCIDKWSDRHRNCPICRLQMTGANESS 65 (70)
T ss_dssp CCCCCCCSSSCCSCCS-EEETTTEEE-CHHHHHHSSCCCSSCHHHHHCTTCCCCCC
T ss_pred CCCCCCCeeCCcCccC-cccCCCCcc-cHHHHHHHHHCcCcCCCcCCcccCCCccc
Confidence 3445799999999999 888999999 99999999887789999999998766554
No 123
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.5e-10 Score=87.69 Aligned_cols=50 Identities=24% Similarity=0.472 Sum_probs=44.8
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
......|+||++.+.+++.++|||.| |..|+..|......||+||..+..
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYF-CESCALEHFRATPRCYICDQPTGG 61 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEE-EHHHHHHHHHHCSBCSSSCCBCCS
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHh-HHHHHHHHHHCCCcCCCcCccccc
Confidence 34457999999999999999999999 999999998877899999999864
No 124
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=2.5e-10 Score=85.54 Aligned_cols=52 Identities=23% Similarity=0.507 Sum_probs=45.6
Q ss_pred CCCCccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccce
Q 010851 441 DDGSSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 493 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 493 (499)
+..+...|+||++.+.+++.+ +|||.| |..|+..|...+..||+||..+...
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTITECLHTF-CKSCIVRHFYYSNRCPKCNIVVHQT 63 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECSSSCCEE-CHHHHHHHHHHCSSCTTTCCCCCSS
T ss_pred hcCCCCCCCCCChHHHCcCEECCCCCHH-HHHHHHHHHHcCCcCCCcCcccCcc
Confidence 345567999999999999987 999999 9999999987778999999998753
No 125
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.97 E-value=1.3e-10 Score=86.78 Aligned_cols=53 Identities=36% Similarity=0.803 Sum_probs=45.6
Q ss_pred CccccccccccCCce-------EEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010851 444 SSSSCVICWEAPVEG-------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~-------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~~ 497 (499)
+...|+||++...++ +.++|||.| |..|+.+|...+..||+||..+. .+.++|
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVF-CSQCLRDSLKNANTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEE-EHHHHHHHHHHCSBCTTTCCBCCCCSCCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChH-hHHHHHHHHHcCCCCCCCCCccChhheeecc
Confidence 346999999998776 888999999 99999999888889999999986 455665
No 126
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=7e-10 Score=83.31 Aligned_cols=49 Identities=27% Similarity=0.739 Sum_probs=42.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhc---cCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA---KKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~---~~~~Cp~Cr~~i~~ 492 (499)
.+...|+||++.+.+++.++|||.| |..|+..|.. ....||+||..+..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~~CgH~f-C~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTIDCGHNF-CLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSSEEECTTCCEE-EHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCCeEEcCCCChh-hHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 4457999999999999999999999 9999999986 24589999998863
No 127
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.96 E-value=2.1e-10 Score=83.79 Aligned_cols=52 Identities=37% Similarity=0.797 Sum_probs=45.4
Q ss_pred ccccccccccCCce-------EEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010851 445 SSSCVICWEAPVEG-------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 445 ~~~C~iC~~~~~~~-------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~~ 497 (499)
...|+||++...++ +.++|||.| |..|+.+|...+..||+||..+. +.+++|
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVF-CSQCLRDSLKNANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEE-EHHHHHHHHHHCSBCTTTCCBCTTTCEEECC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCch-hHHHHHHHHHcCCCCCCCCccCCccceeeee
Confidence 46899999988765 788999999 99999999887889999999996 577776
No 128
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.95 E-value=7e-10 Score=82.30 Aligned_cols=53 Identities=23% Similarity=0.621 Sum_probs=44.1
Q ss_pred CCCccccccccccC---CceEEeCCCCchhhHHhHHHHhccCCccccccccccceeE
Q 010851 442 DGSSSSCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIR 495 (499)
Q Consensus 442 ~~~~~~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~ 495 (499)
......|.||++.+ ..++.+||||.| |..|+..|...+..||+||..+...+.
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLF-HQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEE-EHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHH-HHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 34557999998876 456788999999 999999998887889999999876543
No 129
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=3.4e-10 Score=84.02 Aligned_cols=49 Identities=37% Similarity=0.826 Sum_probs=42.6
Q ss_pred CCccccccccccCCce-------EEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEG-------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~-------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+...|.||++.+.++ +.++|||.| |..|+..|...+..||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVF-CSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEE-EHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChh-cHHHHHHHHHcCCCCCCCCCccCc
Confidence 4457999999988776 888999999 999999998877899999998864
No 130
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.94 E-value=3.1e-10 Score=83.96 Aligned_cols=52 Identities=27% Similarity=0.758 Sum_probs=45.6
Q ss_pred ccccccccccCCce-EEeCCCCchhhHHhHHHHhccCCccccccccccceeEee
Q 010851 445 SSSCVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 445 ~~~C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~ 497 (499)
...|+||++...++ +.+||||.| |..|+.+|...+..||+||.++...++.+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAF-CYVCITRWIRQNPTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEE-STTHHHHHHHHSCSTTTTCCCCCCEECCC
T ss_pred CCCCeeCCccccCCcEecCCCCee-HHHHHHHHHhCcCcCcCCChhhHhhhhcc
Confidence 36899999999885 788999999 99999999887789999999998776554
No 131
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.94 E-value=3.8e-10 Score=96.12 Aligned_cols=48 Identities=33% Similarity=0.789 Sum_probs=44.0
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccccee
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 494 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 494 (499)
..|+||++.+.+++.+||||.| |..|+..|...+..||+||.+|....
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSF-CSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEE-EHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred CCCcccCcccCCceECCCCCCc-cHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 5799999999999999999999 99999999988889999999997543
No 132
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.89 E-value=9.1e-10 Score=82.87 Aligned_cols=49 Identities=22% Similarity=0.613 Sum_probs=42.9
Q ss_pred CCCccccccccccCCceEEeC-CCCchhhHHhHHHHhccC--Ccccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVP-CGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 491 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 491 (499)
..+...|+||++.+.+++.+| |||.| |..|+..|.... ..||+||+.+.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 12 IPDELLCLICKDIMTDAVVIPCCGNSY-CDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp SCGGGSCSSSCCCCTTCEECSSSCCEE-CTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCCcCCChHHhCCeEcCCCCCHH-HHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 345579999999999999999 99999 999999998754 58999999754
No 133
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=7e-10 Score=83.56 Aligned_cols=54 Identities=24% Similarity=0.476 Sum_probs=44.0
Q ss_pred CCCccccccccccCCc---eEEeCCCCchhhHHhHHHHhccCCccccccccccceeEe
Q 010851 442 DGSSSSCVICWEAPVE---GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
......|.||++.+.. .+.+||||.| |..|+.+|...+..||+||.++....++
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f-~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 68 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAF-HRKCLIKWLEVRKVCPLCNMPVLQLAQL 68 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEE-EHHHHHHHHHHCSBCTTTCCBCSSCCSC
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEe-cHHHHHHHHHcCCcCCCcCccccccccc
Confidence 4455799999998743 4455999999 9999999988878999999999765543
No 134
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.87 E-value=7.8e-10 Score=83.70 Aligned_cols=55 Identities=27% Similarity=0.655 Sum_probs=43.2
Q ss_pred CCCccccccccccC--CceEEeC--CCCchhhHHhHHHHhcc-CCccccccccccceeEee
Q 010851 442 DGSSSSCVICWEAP--VEGACVP--CGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVIRLY 497 (499)
Q Consensus 442 ~~~~~~C~iC~~~~--~~~~~~p--CgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~~~~~~ 497 (499)
.++...|+||++.. .+++++| |||.| |..|+.+++.. ...||.||+++.....+|
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~f-C~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~ 67 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQI-CRFCWHRIRTDENGLCPACRKPYPEDPAVY 67 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCC-CHHHHHHHTTSSCSBCTTTCCBCSSCSSCC
T ss_pred cccCCcCCccCccCccccccccccCCCCCc-CHHHHHHHHhcCCCCCCCCCCccCCCchhh
Confidence 34557999999977 4556666 99999 99999998754 458999999997654444
No 135
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.87 E-value=8.5e-10 Score=77.81 Aligned_cols=46 Identities=33% Similarity=0.738 Sum_probs=40.8
Q ss_pred ccccccccccCCc----eEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||++...+ ++.++|||.| |..|+.+|......||+||..+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLL-HRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEE-ETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcc-cHHHHHHHHHcCCcCCCCCCcCC
Confidence 3689999998865 7888999999 99999999887788999999875
No 136
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.86 E-value=1.9e-09 Score=83.53 Aligned_cols=48 Identities=33% Similarity=0.737 Sum_probs=42.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc------CCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK------KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~------~~~Cp~Cr~~i~ 491 (499)
.+...|+||++.+.+++.++|||.| |..|+..+... ...||+||..+.
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSADCNHSF-CRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CTTTSCTTTCSCCSSCEECTTSCCB-CHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred ccCCCCcCCChhhCcceeCCCCCHH-HHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 3447999999999999999999999 99999998776 568999999986
No 137
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-09 Score=85.50 Aligned_cols=49 Identities=35% Similarity=0.719 Sum_probs=42.8
Q ss_pred CCccccccccccCCc---eEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVE---GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
++...|.||++.+.. ++.+||||.| |..|+..|...+..||+||..+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~F-h~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYF-HKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEE-EHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChH-HHHHHHHHHHcCCcCcCcCccCCC
Confidence 445799999998876 7788999999 999999999888899999998864
No 138
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=1.8e-09 Score=84.22 Aligned_cols=49 Identities=31% Similarity=0.651 Sum_probs=42.7
Q ss_pred CCCccccccccccCCc----eEEeCCCCchhhHHhHHHHhccC---Ccccccccccc
Q 010851 442 DGSSSSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKIN 491 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i~ 491 (499)
..+...|+||++.+.+ ++.++|||.| |..|+..|.... ..||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~f-C~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTI-CRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEE-EHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChh-hHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3445799999999998 9999999999 999999998764 68999999875
No 139
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.86 E-value=1.5e-09 Score=85.58 Aligned_cols=49 Identities=22% Similarity=0.624 Sum_probs=42.6
Q ss_pred CCCCccccccccccCCceEEeC-CCCchhhHHhHHHHhccC--Cccccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGACVP-CGHMAGCMSCLSEIKAKK--GDCPVCRTKI 490 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i 490 (499)
...+...|+||++.+.+++.+| |||.| |..|+..+.... ..||+||..+
T Consensus 9 ~~~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTDAVVIPCCGNSY-CDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCTTTEETTTTEECSSCEECTTTCCEE-CHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCcCCCCCCCChhhcCceECCCCCCHH-HHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3455579999999999999999 99999 999999987543 4899999987
No 140
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.86 E-value=1.1e-09 Score=83.34 Aligned_cols=50 Identities=30% Similarity=0.653 Sum_probs=41.6
Q ss_pred CCCccccccccccCC---ceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 442 DGSSSSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..+...|.||++.+. ..+.++|||.| |..|+.+|...+..||+||..+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f-c~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLF-HDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEE-ETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCee-cHHHHHHHHHcCCcCcCcCCccCC
Confidence 344579999988764 34667999999 999999998877899999999864
No 141
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-09 Score=80.21 Aligned_cols=49 Identities=22% Similarity=0.563 Sum_probs=42.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhc-cCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~~ 492 (499)
.+...|+||++...+++.++|||.| |..|+.+|.. ....||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHRF-CESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCCC-CHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcCeeECCCCCHH-HHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 3457999999999999999999999 9999999984 35689999998864
No 142
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.83 E-value=1.2e-09 Score=77.00 Aligned_cols=46 Identities=24% Similarity=0.688 Sum_probs=40.4
Q ss_pred ccccccccccCCc---eEEeC-CCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE---GACVP-CGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~---~~~~p-CgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||++...+ ++.+| |||.| |..|+.+|...+..||+||+.+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f-~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGF-HAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEE-CTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcc-cHHHHHHHHHcCCcCcCCCCEeE
Confidence 4689999999877 67777 99999 99999999888889999998763
No 143
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=4.6e-09 Score=76.28 Aligned_cols=44 Identities=27% Similarity=0.725 Sum_probs=38.4
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc---CCccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK---KGDCPVC 486 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~---~~~Cp~C 486 (499)
..+...|+||++.+.+++.++|||.| |..|+.+|... ...||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKPVTIDCGHNF-CLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSCEECTTSSEE-CHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCCeEEeCCCCcc-hHHHHHHHHHcCCCCCcCcCC
Confidence 34457999999999999999999999 99999999873 4579998
No 144
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.81 E-value=7.4e-10 Score=84.60 Aligned_cols=49 Identities=31% Similarity=0.725 Sum_probs=42.7
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-------CCcccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-------KGDCPVCRTKIN 491 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-------~~~Cp~Cr~~i~ 491 (499)
..+...|+||++.+.+++.+||||.| |..|+..|... ...||+||..+.
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~CgH~f-C~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCGHSL-CRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSSCCC-CHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cccCCCCcCCCcccCCeeECCCCCHH-HHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 34457999999999999999999999 99999988765 458999999985
No 145
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.81 E-value=2.9e-09 Score=81.00 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=43.4
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
.+...|+||++...+++.++|||.| |..|+.+|... ...||+||.++.
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~~CgH~f-c~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIVSTGQTY-ERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEETTTEEE-EHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred cccCCCCCccccccCCEEcCCCCee-cHHHHHHHHHHCcCCCCCCcCCCC
Confidence 3457999999999999999999999 99999999876 668999999985
No 146
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=2e-09 Score=83.33 Aligned_cols=48 Identities=33% Similarity=0.794 Sum_probs=42.6
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc------CCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK------KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~------~~~Cp~Cr~~i~ 491 (499)
.+...|+||++.+.+++.+||||.| |..|+..+... ...||+||..+.
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSLDCGHSF-CQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCCSSSCCB-CTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred cCCCCCCCCCcccCCceeCCCCCHH-HHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 4457999999999999999999999 99999998765 568999999986
No 147
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=1.6e-09 Score=81.77 Aligned_cols=48 Identities=23% Similarity=0.605 Sum_probs=41.2
Q ss_pred CccccccccccCCce---EEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 444 SSSSCVICWEAPVEG---ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
+...|.||++.+... +.+||||.| |..|+.+|...+..||+||+.+..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~f-h~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEF-HAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEE-ETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHh-HHHHHHHHHHcCCcCcCcCCcCCC
Confidence 446999999887654 778999999 999999998878899999998753
No 148
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.77 E-value=2.2e-09 Score=85.83 Aligned_cols=47 Identities=26% Similarity=0.728 Sum_probs=42.8
Q ss_pred CccccccccccCCceEE-eCCCCchhhHHhHHHHhccC-Ccccccccccc
Q 010851 444 SSSSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKK-GDCPVCRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~ 491 (499)
+...|+||++.+.+++. ++|||.| |..|+..|.... ..||+||.++.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~F-C~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLC-CFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEE-EHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChh-hHHHHHHHHHHCcCCCCCCCCcCC
Confidence 44699999999999999 9999999 999999998876 68999999985
No 149
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=6.5e-09 Score=74.08 Aligned_cols=43 Identities=33% Similarity=0.774 Sum_probs=37.3
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhc---cCCccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA---KKGDCPVC 486 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~---~~~~Cp~C 486 (499)
.+...|+||++...+++.++|||.| |..|+.+|.. ....||+|
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEPVIIECGHNF-CKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSCCCCSSCCCC-CHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCccEeCCCCCcc-CHHHHHHHHHhcCCCCCCCCC
Confidence 4457999999999999999999999 9999999954 34589998
No 150
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.71 E-value=6.1e-09 Score=86.89 Aligned_cols=47 Identities=26% Similarity=0.627 Sum_probs=42.0
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccC-Cccccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQ 492 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~ 492 (499)
...|+||++.+.+++.+||||.| |..|+..|.... ..||+||.++..
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHNV-CKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEE-EHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcCcEEeeCCCcc-cHHHHHHHHhHCcCCCCCCCccCCC
Confidence 36899999999999999999999 999999988753 489999999865
No 151
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.71 E-value=5.5e-09 Score=83.44 Aligned_cols=48 Identities=25% Similarity=0.620 Sum_probs=43.4
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
+...|+||++.+.+++.+ +|||.| |..|+..|...+..||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNY-CSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEE-EHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCHh-hHHHHHHHHHCCCCCCCCCCcCCh
Confidence 346999999999999988 899999 999999999877899999998863
No 152
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.71 E-value=8e-09 Score=83.92 Aligned_cols=49 Identities=20% Similarity=0.636 Sum_probs=44.2
Q ss_pred CCccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
.+...|+||++.+.+++.+ +|||.| |..|+..|......||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSF-CKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEE-EHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CCcCCCccCChHHhCcCEeCCCCChh-hHHHHHHHHHhCCcCcCCCccccc
Confidence 3446999999999999998 999999 999999998877899999999874
No 153
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.70 E-value=4.6e-09 Score=76.79 Aligned_cols=46 Identities=28% Similarity=0.680 Sum_probs=37.6
Q ss_pred ccccccccc-cCCce----EEeCCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 445 SSSCVICWE-APVEG----ACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~-~~~~~----~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
+..|+||++ ...++ +.++|||.| |..|+.++... ...||+||.++.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTL-CESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCE-EHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHh-HHHHHHHHHHcCCCcCCCCCCccc
Confidence 368999999 55444 567999999 99999999554 457999999986
No 154
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.69 E-value=1.6e-08 Score=78.05 Aligned_cols=50 Identities=10% Similarity=0.013 Sum_probs=44.9
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
..+...|+||++...++|.++|||.| |..|+.+++.....||+||.++..
T Consensus 11 ~p~~~~CpI~~~~m~dPV~~~cGhtf-~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 11 APDEFRDPLMDTLMTDPVRLPSGTVM-DRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTSCEE-EHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CchheECcccCchhcCCeECCCCCEE-CHHHHHHHHhcCCCCCCCcCCCCh
Confidence 34557999999999999999999999 999999999877789999998863
No 155
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.67 E-value=4.2e-09 Score=102.85 Aligned_cols=52 Identities=29% Similarity=0.876 Sum_probs=45.4
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCCccccccccccceeEeeeC
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 499 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~~~~ 499 (499)
+...|+||++.+.+++++||||.++|..|+..+. .||+||.+|...++||.+
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~~----~CP~CR~~i~~~~~i~~s 345 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICRGIIKGTVRTFLS 345 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCCEEECTTTGGGCS----BCTTTCCBCCEEEECC--
T ss_pred CCCCCCccCCcCCceEEcCCCChhHhHHHHhcCC----cCCCCCCCccCeEEeecC
Confidence 3469999999999999999999944999999884 499999999999999953
No 156
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.67 E-value=1.9e-09 Score=76.18 Aligned_cols=45 Identities=24% Similarity=0.540 Sum_probs=38.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
.+...|.||++.+.+++.+||||.| |..|+..+ ...||+||+.+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~f-C~~Ci~~~---~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTL-CSGCLEAS---GMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCS-BTTTCSSS---SSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcc-cHHHHccC---CCCCCcCCcEee
Confidence 3456899999999999999999999 99998763 347999999875
No 157
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.67 E-value=1.3e-08 Score=99.79 Aligned_cols=50 Identities=34% Similarity=0.792 Sum_probs=45.0
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHHhc-cCCccccccccccceeEe
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~~~~~~ 496 (499)
..|+||++...+++.+||||.| |..|+..|.. ....||+||.++.....+
T Consensus 333 ~~C~ICle~~~~pv~lpCGH~F-C~~Ci~~wl~~~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 333 QLCKICAENDKDVKIEPCGHLM-CTSCLTSWQESEGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp SBCTTTSSSBCCEEEETTCCEE-CHHHHHHHHHHTCSBCTTTCCBCCEEEEC
T ss_pred CCCCccCcCCCCeEEeCCCChh-hHHHHHHHHhcCCCCCCCCCCccCCceeE
Confidence 6999999999999999999999 9999999877 467899999999876555
No 158
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.65 E-value=4.6e-09 Score=86.45 Aligned_cols=49 Identities=35% Similarity=0.761 Sum_probs=42.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 492 (499)
.+...|+||++.+.+++.++|||.| |..|+..|... ...||+||..+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTL-CKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEE-CHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCceeEcCCCCHH-hHHHHHHHHhHCcCCCCCCCcccCc
Confidence 3446999999999999999999999 99999998865 5589999998853
No 159
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.63 E-value=4.5e-08 Score=77.56 Aligned_cols=48 Identities=10% Similarity=0.005 Sum_probs=44.0
Q ss_pred CCccccccccccCCceEEeCCC-CchhhHHhHHHHhccCCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCG-HMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCg-H~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
.+...|+||++...++|.++|| |.| |..|+.+++.....||+||.++.
T Consensus 20 p~~~~CpI~~~~m~dPV~~~cG~htf-~r~cI~~~l~~~~~cP~~~~~l~ 68 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDPVVLPSSRVTV-DRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp CTTTBCTTTCSBCSSEEECTTTCCEE-EHHHHHHHTTTSCBCTTTCSBCC
T ss_pred cHhcCCcCccccccCCeECCCCCeEE-CHHHHHHHHHhCCCCCCCCCCCC
Confidence 4457999999999999999999 999 99999999987778999999886
No 160
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.63 E-value=1.5e-08 Score=87.27 Aligned_cols=48 Identities=31% Similarity=0.630 Sum_probs=42.7
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCC-ccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~-~Cp~Cr~~i~~ 492 (499)
+...|+||++.+.+++.+||||.| |..|+..+..... .||+||..+..
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNV-CKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEE-EHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCEeecCChhhcCCEEcCCCCch-hHHHHHHHHHhCCCcCCCCCccCCC
Confidence 346899999999999999999999 9999999987643 79999999874
No 161
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.62 E-value=6.4e-08 Score=77.00 Aligned_cols=49 Identities=10% Similarity=0.018 Sum_probs=44.7
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
..+...|+||++...++|.+||||.| |..|+.+++.....||+||.++.
T Consensus 26 ~p~~~~CpI~~~~m~dPV~~~cGhtf-~r~~I~~~l~~~~~cP~~~~~l~ 74 (100)
T 2kre_A 26 APDEFRDPLMDTLMTDPVRLPSGTIM-DRSIILRHLLNSPTDPFNRQTLT 74 (100)
T ss_dssp CSTTTBCTTTCSBCSSEEEETTTEEE-EHHHHHHHTTSCSBCSSSCCBCC
T ss_pred CcHhhCCcCccCcccCCeECCCCCEE-chHHHHHHHHcCCCCCCCCCCCC
Confidence 34567999999999999999999999 99999999987778999999886
No 162
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.60 E-value=2.5e-08 Score=82.32 Aligned_cols=49 Identities=31% Similarity=0.602 Sum_probs=43.2
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccC-Cccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~ 492 (499)
.+...|+||++...+++.++|||.| |..|+..|.... ..||+||.++..
T Consensus 16 ~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALREAVQTPCGHRF-CKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEE-EHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhcCeEECCcCChh-hHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 4457999999999999999999999 999999987654 389999999864
No 163
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.59 E-value=1.9e-08 Score=82.52 Aligned_cols=46 Identities=26% Similarity=0.616 Sum_probs=38.0
Q ss_pred cccccccccCCce------------------EEeCCCCchhhHHhHHHHhc-----cCCccccccccccc
Q 010851 446 SSCVICWEAPVEG------------------ACVPCGHMAGCMSCLSEIKA-----KKGDCPVCRTKINQ 492 (499)
Q Consensus 446 ~~C~iC~~~~~~~------------------~~~pCgH~~~C~~C~~~~~~-----~~~~Cp~Cr~~i~~ 492 (499)
..|+||++.+... ..++|+|.| |..|+..|.. ....||+||..+..
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~F-h~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAF-HLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEE-CHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcc-cHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 5899999987543 378999999 9999999983 35589999998754
No 164
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.58 E-value=1.7e-08 Score=88.67 Aligned_cols=48 Identities=27% Similarity=0.619 Sum_probs=42.7
Q ss_pred CCccccccccccCCceEEe-CCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
.+...|+||++.+.+++.+ +|||.| |..|+..|... ...||+||..+.
T Consensus 52 ~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 52 HSELMCPICLDMLKNTMTTKECLHRF-CADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHHBCTTTSSBCSSEEEETTTCCEE-EHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCCcccChHhhCcCEeCCCCChh-HHHHHHHHHHhCcCCCCCCCCcCC
Confidence 3446999999999999988 999999 99999999876 668999999984
No 165
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=2.9e-08 Score=75.89 Aligned_cols=46 Identities=22% Similarity=0.545 Sum_probs=38.1
Q ss_pred ccccccccccCCc--------------eEEe-CCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE--------------GACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~--------------~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||++.+.+ ++.+ +|||.| |..|+.+|...+..||+||+++.
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~F-H~~Ci~~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSF-HNCCMSLWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEE-EHHHHHHHTTTCCBCTTTCCBCC
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCcc-ChHHHHHHHHhCCCCCCcCCCcc
Confidence 3578888887755 4444 599999 99999999888889999999875
No 166
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.56 E-value=2.8e-08 Score=84.53 Aligned_cols=47 Identities=23% Similarity=0.511 Sum_probs=41.7
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhccC-Cccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKI 490 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i 490 (499)
.+...|+||++.+.+++.++|||.| |..|+.+|.... ..||+||.++
T Consensus 29 ~~~~~C~IC~~~~~~pv~~~CgH~F-C~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 29 EAKYLCSACRNVLRRPFQAQCGHRY-CSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEE-EHHHHHHHGGGSCEECHHHHHTT
T ss_pred CcCcCCCCCChhhcCcEECCCCCcc-CHHHHHHHHhcCCCCCCCCCCcc
Confidence 4457999999999999999999999 999999998754 3899999975
No 167
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.55 E-value=1.6e-08 Score=82.73 Aligned_cols=46 Identities=30% Similarity=0.768 Sum_probs=41.1
Q ss_pred ccccccccccCCceEEeCCCCchhhHHhHHHHhccC---Ccccccccccc
Q 010851 445 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i~ 491 (499)
...|+||++.+.+++.+||||.| |..|+..+.... ..||+||..+.
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIF-CKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCC-CSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCCcccChhhcCeEECCCCCHH-HHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 35899999999999999999999 999999988754 37999999886
No 168
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.53 E-value=2.2e-08 Score=82.46 Aligned_cols=48 Identities=27% Similarity=0.529 Sum_probs=43.1
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 492 (499)
+...|+||++.+.+++.++|||.| |..|+..|... ...||+||.++..
T Consensus 22 ~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHILADPVETSCKHLF-CRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBCSSEEECTTSCEE-EHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHhcCcEEcCCCCcc-cHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 446999999999999999999999 99999999876 5689999999863
No 169
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.49 E-value=4.7e-08 Score=82.48 Aligned_cols=46 Identities=39% Similarity=0.865 Sum_probs=42.1
Q ss_pred ccccccccccCCce-------EEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVEG-------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~-------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|+||++.+.++ +.++|||.| |..|+.+|...+..||+||..+.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVF-CSQCLRDSLKNANTCPTCRKKIN 59 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEE-EHHHHHHHHTTCSBCTTTCCBCT
T ss_pred CCCCcccChhhhCccccccCeEecCCCChh-hHHHHHHHHHhCCCCCCCCCcCc
Confidence 36899999998877 899999999 99999999888889999999986
No 170
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.44 E-value=6.4e-08 Score=81.65 Aligned_cols=53 Identities=36% Similarity=0.803 Sum_probs=45.9
Q ss_pred CccccccccccCCce-------EEeCCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010851 444 SSSSCVICWEAPVEG-------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~-------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~~ 497 (499)
+...|.||++...++ +..+|||.| |..|+.+|....+.||+||..+. +.+++|
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~f-c~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 132 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVF-CSQCLRDSLKNANTCPTCRKKINHKRYHPIY 132 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEE-EHHHHHHHHHHCSBCTTTCCBCCGGGEEEEC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChh-hHHHHHHHHHcCCCCCCCCCcCChhcceeee
Confidence 346899999988765 888999999 99999999988889999999996 566776
No 171
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.37 E-value=2.3e-07 Score=74.42 Aligned_cols=46 Identities=22% Similarity=0.474 Sum_probs=38.8
Q ss_pred ccccccccccCCc------------------eEEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVE------------------GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~------------------~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||++.+.. .+.++|+|.| +..|+..|...+..||+||+.+.
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~F-H~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAF-HFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEE-EHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEE-CHHHHHHHHHcCCcCcCCCCcce
Confidence 3689999987654 3667999999 99999999887889999999853
No 172
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.37 E-value=4.4e-08 Score=80.72 Aligned_cols=45 Identities=31% Similarity=0.693 Sum_probs=40.6
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 444 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
+...|+||++.+.+++.+ +|||.| |..|+..+.. ..||+||..+.
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~f-C~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIF-CSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCB-CTTTGGGGTT--TBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHH-HHHHHHHHhc--CCCcCCCCcCc
Confidence 447999999999999999 999999 9999999875 57999999885
No 173
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.26 E-value=4.4e-07 Score=86.91 Aligned_cols=47 Identities=21% Similarity=0.173 Sum_probs=42.0
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccCC-cccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~-~Cp~Cr~~i~ 491 (499)
....|+||++...++|.+||||.| |..|+.++..... .||+||.++.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f-~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITY-DRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEE-ETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred cccCCcCcCCHhcCCeECCCCCEE-CHHHHHHHHHHCCCCCcCCCCCCc
Confidence 346999999999999999999999 9999999987643 5999999986
No 174
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.24 E-value=4.9e-07 Score=79.70 Aligned_cols=49 Identities=31% Similarity=0.597 Sum_probs=43.0
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHhcc-CCccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 492 (499)
.+...|+||++.+.+++.++|||.| |..|+.+|... ...||+||..+..
T Consensus 16 ~~~~~C~IC~~~~~~pv~~~CgH~f-C~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALREAVQTPCGHRF-CKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEE-EHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhcCcEECCCCCHH-HHHHHHHHHHhCCCCCCCCccCcch
Confidence 4457999999999999999999999 99999998765 3489999999864
No 175
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=6.3e-07 Score=70.48 Aligned_cols=45 Identities=22% Similarity=0.399 Sum_probs=39.1
Q ss_pred CccccccccccCCceEEeC-CCCchhhHHhHHHHhccC------Ccccc--cccc
Q 010851 444 SSSSCVICWEAPVEGACVP-CGHMAGCMSCLSEIKAKK------GDCPV--CRTK 489 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~~~~~------~~Cp~--Cr~~ 489 (499)
....|+||++.+.++|.++ |||.| |..|+..|+... ..||+ |+..
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f-~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTY-EEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEE-EHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCCEEcCCCCCee-cHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3469999999999999996 99999 999999998642 48999 9855
No 176
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.19 E-value=9e-07 Score=77.59 Aligned_cols=48 Identities=21% Similarity=0.123 Sum_probs=42.6
Q ss_pred CccccccccccCCceEEeCCCCchhhHHhHHHHhccC-Cccccccccccc
Q 010851 444 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~ 492 (499)
+...|+||++...++|.+||||.| |..|+..+.... ..||+||.++..
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtf-er~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITY-DRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEE-EHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhhcccCccccCCCCeECCCCCEE-CHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 447999999999999999999999 999999998763 369999998863
No 177
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.12 E-value=4e-07 Score=74.06 Aligned_cols=46 Identities=22% Similarity=0.466 Sum_probs=0.4
Q ss_pred ccccccccccCCce------------------EEeCCCCchhhHHhHHHHhccCCcccccccccc
Q 010851 445 SSSCVICWEAPVEG------------------ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~~~------------------~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 491 (499)
...|.||++.+.+. +..+|+|.| |..|+..|...+..||+||+++.
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~F-H~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAF-HFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp C----------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceE-cHHHHHHHHHcCCcCCCCCCeee
Confidence 35899999887642 235899999 99999999887788999999853
No 178
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.94 E-value=6.9e-06 Score=75.57 Aligned_cols=47 Identities=17% Similarity=0.316 Sum_probs=41.1
Q ss_pred CccccccccccCCceEEe-CCCCchhhHHhHHHHhccC--Ccccc--cccccc
Q 010851 444 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKK--GDCPV--CRTKIN 491 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~--~~Cp~--Cr~~i~ 491 (499)
....|+||++.+.++|.. .|||.| |..|+..++... ..||+ ||..+.
T Consensus 180 ~el~CPIcl~~f~DPVts~~CGHsF-cR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAPLISRKCNHVF-DRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSEEEESSSCCEE-EHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCCeeeCCCCCcc-cHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 446999999999999985 999999 999999998753 47999 999875
No 179
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=5.2e-06 Score=62.79 Aligned_cols=48 Identities=23% Similarity=0.500 Sum_probs=38.7
Q ss_pred CccccccccccC--CceEEeCCC-----CchhhHHhHHHHhccC--Cccccccccccc
Q 010851 444 SSSSCVICWEAP--VEGACVPCG-----HMAGCMSCLSEIKAKK--GDCPVCRTKINQ 492 (499)
Q Consensus 444 ~~~~C~iC~~~~--~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~Cp~Cr~~i~~ 492 (499)
+...|.||++.. .+.+++||. |.| ...|+.+|...+ ..||+||..+.-
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~f-H~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFV-HQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCE-ETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCee-CHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 346899999765 345678996 999 999999998764 489999998853
No 180
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.82 E-value=9.6e-06 Score=57.84 Aligned_cols=51 Identities=14% Similarity=0.256 Sum_probs=44.7
Q ss_pred cccccccccCCceEEe-CCCCchhhHHhHHHHhccCCcccccccccc--ceeEee
Q 010851 446 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 497 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~~~ 497 (499)
..|+||++...++|.. +|||.| |+.|+.+|....+.||+++.++. +.++++
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~y-er~~I~~~l~~~~~cP~t~~~L~~~~Lip~~ 57 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTIF-EKSLLEQYVKDTGNDPITNEPLSIEEIVEIV 57 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEE-EHHHHHHHHHHHSBCTTTCCBCCGGGCEECC
T ss_pred EEecCCCCCCCCCEEeCCCCcEE-cHHHHHHHHHhCCCCcCCcCCCChhhcEECc
Confidence 5899999999999999 999999 99999999876667999999985 455554
No 181
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.73 E-value=8.6e-06 Score=63.95 Aligned_cols=44 Identities=25% Similarity=0.557 Sum_probs=34.6
Q ss_pred ccccccccccCCceEEe---CCCCchhhHHhHHHHhcc--------CCcccc--cccc
Q 010851 445 SSSCVICWEAPVEGACV---PCGHMAGCMSCLSEIKAK--------KGDCPV--CRTK 489 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~---pCgH~~~C~~C~~~~~~~--------~~~Cp~--Cr~~ 489 (499)
...|.||++.......+ +|||.| |..|+...+.. ...||. |+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~F-C~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIF-CTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEE-EHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCcc-cHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 35899999987665433 799999 99999886642 137999 9987
No 182
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.43 E-value=0.00012 Score=56.25 Aligned_cols=49 Identities=22% Similarity=0.486 Sum_probs=37.1
Q ss_pred ccccccccCCce-EEeCCCCchhhHHhHHHHhcc-CCccccccccccceeEe
Q 010851 447 SCVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQVIRL 496 (499)
Q Consensus 447 ~C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~~~~~ 496 (499)
-|.+|--..... ..+||.|.| |..|+..+... .+.||.|+.+|..+-++
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvF-CydCa~~~~~~~~k~Cp~C~~~V~rVe~~ 53 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVF-CYDCAILHEKKGDKMCPGCSDPVQRIEQC 53 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEE-EHHHHHHHHHTTCCBCTTTCCBCSEEEEE
T ss_pred ecCccCCCeEEEeeeccccccH-HHHHHHHHHhccCCCCcCcCCeeeeeEEe
Confidence 466676555443 567999999 99999998754 56899999999865543
No 183
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.29 E-value=0.00031 Score=51.79 Aligned_cols=49 Identities=22% Similarity=0.621 Sum_probs=39.6
Q ss_pred CCccccccccccCCceE-EeCCCCchhhHHhHHHHhccC--Cccccccccccc
Q 010851 443 GSSSSCVICWEAPVEGA-CVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~~ 492 (499)
+....|.||++...... ...|+|.| -..|+.+|.+.+ ..||+||.....
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~~C~h~f-H~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCETCGIRM-HLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECSSSCCEE-CHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCCCcCcchhhHcccCCccCCCCchh-hHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 34479999999886443 33899999 999999998776 689999988753
No 184
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=96.93 E-value=0.00041 Score=49.06 Aligned_cols=48 Identities=27% Similarity=0.457 Sum_probs=37.4
Q ss_pred CCccccccccccCCceEEeCCCC-----chhhHHhHHHHhcc--CCcccccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGH-----MAGCMSCLSEIKAK--KGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH-----~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 491 (499)
++...|-||++...+....||.+ .| -..|+.+|... +..||+|+..+.
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~-H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENV-HRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSC-CHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhh-HHHHHHHHHHhCCCCccCCCCCeee
Confidence 34469999998766666789764 44 99999999864 468999998764
No 185
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=96.71 E-value=0.00035 Score=66.47 Aligned_cols=49 Identities=27% Similarity=0.678 Sum_probs=37.5
Q ss_pred CCccccccccccCCc------eEE--eCCCCchhhHHhHHHHhccC-----------Cccccccccccc
Q 010851 443 GSSSSCVICWEAPVE------GAC--VPCGHMAGCMSCLSEIKAKK-----------GDCPVCRTKINQ 492 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~------~~~--~pCgH~~~C~~C~~~~~~~~-----------~~Cp~Cr~~i~~ 492 (499)
+...+|.||++...+ .++ .+|+|.| ...|+.+|-+.. +.||+||.+|..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~F-H~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKC-HAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCB-CSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCcc-chHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 445799999986654 222 3799999 999999987531 469999999864
No 186
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=95.43 E-value=0.011 Score=44.41 Aligned_cols=48 Identities=25% Similarity=0.735 Sum_probs=40.2
Q ss_pred cccccccccCCceEEeCCC-CchhhHHhHHHHhccCCccccccccccceeEe
Q 010851 446 SSCVICWEAPVEGACVPCG-HMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 496 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCg-H~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~~ 496 (499)
..|..|+-.....| .|. |.+ |..|...|...+..||+|..++...+++
T Consensus 29 ~nCKsCWf~~k~LV--~C~dHYL-Cl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 29 QFCKSCWFENKGLV--ECNNHYL-CLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CCCCSSCSCCSSEE--ECSSCEE-EHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred ccChhhccccCCee--eecchhh-HHHHHHHHHhhccCCcccCCcCCcceec
Confidence 68999998888554 466 777 9999999998888999999998877654
No 187
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=93.38 E-value=0.05 Score=39.44 Aligned_cols=32 Identities=31% Similarity=0.638 Sum_probs=27.6
Q ss_pred ccccccccccCCceEEeCCC----CchhhHHhHHHHh
Q 010851 445 SSSCVICWEAPVEGACVPCG----HMAGCMSCLSEIK 477 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~pCg----H~~~C~~C~~~~~ 477 (499)
...|.+|.++..+.-|+.|- |.| |+.|...-.
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~HkF-CFpCsr~sI 50 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHKF-CFPCSRESI 50 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEE-CHHHHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCee-eccccHHHH
Confidence 36999999999999999884 999 999987744
No 188
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=89.18 E-value=0.29 Score=44.77 Aligned_cols=47 Identities=23% Similarity=0.639 Sum_probs=36.9
Q ss_pred ccccccccccCCceE-EeCCCCchhhHHhHHHHhccC--Cccccccccccc
Q 010851 445 SSSCVICWEAPVEGA-CVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKINQ 492 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~~ 492 (499)
...|.+|.+-..... +-.|+|.| -..|..++.+.. ..||.|+.....
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~-H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRM-HLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEE-CHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CCcCcchhhHHhCCcccCccChHH-HHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 469999999876554 33499999 999999987654 489999987653
No 189
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=89.04 E-value=0.14 Score=40.05 Aligned_cols=30 Identities=23% Similarity=0.525 Sum_probs=24.3
Q ss_pred ccccccccc-CCceEE--eCCCCchhhHHhHHHH
Q 010851 446 SSCVICWEA-PVEGAC--VPCGHMAGCMSCLSEI 476 (499)
Q Consensus 446 ~~C~iC~~~-~~~~~~--~pCgH~~~C~~C~~~~ 476 (499)
..|.||.+. +..++. +.|+|.| |..|+..+
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~-C~~Cl~~~ 36 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSY-CDECLKAT 36 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEE-CHHHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHH-hHHHCHHH
Confidence 689999975 444544 8999999 99999983
No 190
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=66.82 E-value=7 Score=29.11 Aligned_cols=46 Identities=33% Similarity=0.745 Sum_probs=32.4
Q ss_pred ccccccccccCC---ce-EEe---CCCCchhhHHhHHHHhcc-CCcccccccccc
Q 010851 445 SSSCVICWEAPV---EG-ACV---PCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 491 (499)
Q Consensus 445 ~~~C~iC~~~~~---~~-~~~---pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 491 (499)
...|.||-|..- +. +|+ -|+--+ |+.|.+--.+. +..||.|....+
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPv-CrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPA-CRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCC-CHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChh-hHHHHHHHHhccCccccccCCccc
Confidence 369999998631 11 333 566555 99999876654 568999998876
No 191
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=66.32 E-value=0.89 Score=43.16 Aligned_cols=45 Identities=22% Similarity=0.488 Sum_probs=34.6
Q ss_pred ccccccccccCCceEEe----CCCCch-hhHHhHHHHhccCCcccccccc
Q 010851 445 SSSCVICWEAPVEGACV----PCGHMA-GCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 445 ~~~C~iC~~~~~~~~~~----pCgH~~-~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
...|+||-..+.-.++. .=|+++ .|..|...|...+.+||.|...
T Consensus 182 ~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 182 RTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp CSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred CCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 36999999999876664 245432 3999999988777899999876
No 192
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=65.05 E-value=4.5 Score=32.80 Aligned_cols=50 Identities=22% Similarity=0.489 Sum_probs=35.3
Q ss_pred CCCCCCccccccccccCCceEEeCCCCchhhHHhHHHH-----------hccCCcccccccc
Q 010851 439 VKDDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEI-----------KAKKGDCPVCRTK 489 (499)
Q Consensus 439 ~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~-----------~~~~~~Cp~Cr~~ 489 (499)
..+++....|.||.+.-.-...-.|-..| |..|+.+. ....+.|+.|+..
T Consensus 51 ~d~Dg~~~~C~vC~dGG~LlcCd~Cpr~F-c~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 51 RDSDGMDEQCRWCAEGGNLICCDFCHNAF-CKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp BCTTSCBSSCTTTCCCSEEEECSSSSCEE-EHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred cCCCCCCCcCeecCCCCeeEecCCCchhh-hHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 34455667899999876544444788888 99999863 1235789999764
No 193
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=54.05 E-value=6.4 Score=27.49 Aligned_cols=34 Identities=29% Similarity=0.693 Sum_probs=26.2
Q ss_pred CCCccccccccccCCceEEeCC-CCchhhHHhHHHHh
Q 010851 442 DGSSSSCVICWEAPVEGACVPC-GHMAGCMSCLSEIK 477 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pC-gH~~~C~~C~~~~~ 477 (499)
.++..-|+||.+- .....+.| |-.| |..|...+-
T Consensus 5 ~ee~pWC~ICneD-AtlrC~gCdgDLY-C~rC~rE~H 39 (67)
T 2d8v_A 5 SSGLPWCCICNED-ATLRCAGCDGDLY-CARCFREGH 39 (67)
T ss_dssp CCCCSSCTTTCSC-CCEEETTTTSEEE-CSSHHHHHT
T ss_pred CcCCCeeEEeCCC-CeEEecCCCCcee-hHHHHHHHc
Confidence 3445799999998 55778899 5666 999987764
No 194
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=51.36 E-value=12 Score=30.97 Aligned_cols=48 Identities=23% Similarity=0.497 Sum_probs=35.9
Q ss_pred CCCCccccccccccCCceEEeCCCCchhhHHhHHHHh-----------ccCCcccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIK-----------AKKGDCPVCRTK 489 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~-----------~~~~~Cp~Cr~~ 489 (499)
+++....|.||.+.-.-...-.|-..| |..|+.... ...+.||.|+..
T Consensus 59 ~Dg~~d~C~vC~~GG~LlcCD~Cpr~F-h~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGGNLICCDFCHNAF-CKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCCCSSEEECSSSCCEE-EHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCCCCcEEeCCCCCCee-eHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 455667999999988755556888888 999998532 235789999853
No 195
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=49.70 E-value=1.2 Score=36.56 Aligned_cols=45 Identities=22% Similarity=0.569 Sum_probs=32.2
Q ss_pred CccccccccccC-----CceEEeCCCCchhhHHhHHHHhcc----CCcccccccc
Q 010851 444 SSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKAK----KGDCPVCRTK 489 (499)
Q Consensus 444 ~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~~----~~~Cp~Cr~~ 489 (499)
+...|.+|...+ ...+..-|.|.+ |..|....... .+.|-+|+..
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~V-C~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNV-CTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEE-ETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCccc-ccccCCccCCCCCccceechhhHHH
Confidence 346999999887 233566899999 99997655321 3469999764
No 196
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=47.76 E-value=9.9 Score=26.78 Aligned_cols=43 Identities=16% Similarity=0.393 Sum_probs=29.8
Q ss_pred cccccccccCCceEEeCCCCchhhHHhHHHH-hc---cCCcccccccc
Q 010851 446 SSCVICWEAPVEGACVPCGHMAGCMSCLSEI-KA---KKGDCPVCRTK 489 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~-~~---~~~~Cp~Cr~~ 489 (499)
..|.||.+...-...--|...| ...|...- .. ..+.|+.|+..
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~~-H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAAF-HWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCEE-CHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCCCCeEEECCCCCCce-ecccCCCccCcCCCCCEECccccCC
Confidence 5799999876544445787777 88887532 22 24689999754
No 197
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=43.72 E-value=2.5 Score=35.57 Aligned_cols=45 Identities=20% Similarity=0.552 Sum_probs=31.7
Q ss_pred CccccccccccC-----CceEEeCCCCchhhHHhHHHHhc-cCCcccccccc
Q 010851 444 SSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTK 489 (499)
Q Consensus 444 ~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~ 489 (499)
+...|.+|...+ .-.++.-|.|.+ |..|...... ..+.|-+|+..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~V-C~~C~~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFV-CKSCSHAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEE-CGGGEECCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchh-hcccccccCCCCcEeeHHHHHH
Confidence 457999999974 445667899999 9999732221 13469899764
No 198
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=42.27 E-value=1.1e+02 Score=26.09 Aligned_cols=132 Identities=9% Similarity=-0.051 Sum_probs=85.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCCCCcHHHHHHH
Q 010851 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK 95 (499)
Q Consensus 16 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~TpL~~A~~ 95 (499)
+-++-+-.|...|++++...+.+.. .+..-+.-|--+|...|+.++++.-..+-.|+.. .+.+...
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~---------L~~Ly~~ 72 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDK---------LSFLYLV 72 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHH---------HHHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHH---------HHHHHHH
Confidence 4467889999999999887776532 1122344455555555999999998888666553 4666677
Q ss_pred cCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHHcccccccccccccCCCHHHHHhhhcCCHHHHHHH
Q 010851 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI-NVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVV 174 (499)
Q Consensus 96 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~~g~t~Lh~~A~~~~~~~~~~~L 174 (499)
.|+.+-++.|.+.. ....+-..+++.+...|++ +++++|++.|--.. +.. .|..++..++.+-|
T Consensus 73 tg~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~e----------A~~-~A~t~g~~~~a~~~ 137 (177)
T 3mkq_B 73 TGDVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPL----------AYA-VAKANGDEAAASAF 137 (177)
T ss_dssp HTCHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHH----------HHH-HHHHTTCHHHHHHH
T ss_pred hCCHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHH----------HHH-HHHHcCcHHHHHHH
Confidence 78877766664321 1222334577888788886 57888876553221 333 56678888888777
Q ss_pred Hh
Q 010851 175 IP 176 (499)
Q Consensus 175 l~ 176 (499)
++
T Consensus 138 ~~ 139 (177)
T 3mkq_B 138 LE 139 (177)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 199
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=40.00 E-value=13 Score=35.83 Aligned_cols=45 Identities=24% Similarity=0.573 Sum_probs=32.8
Q ss_pred cccccccccCCceEE-eCCCCchhhHHhHHHHhc----cCCcccccccccc
Q 010851 446 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKA----KKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~----~~~~Cp~Cr~~i~ 491 (499)
..|++-..+...++- ..|.|.- |++-..-+.. ..+.||+|.+.+.
T Consensus 250 L~CPlS~~ri~~PvRg~~C~HlQ-CFDl~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 250 LQCPISYTRMKYPSKSINCKHLQ-CFDALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp SBCTTTSSBCSSEEEETTCCSSC-CEEHHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred ecCCCccccccccCcCCcCCCcc-eECHHHHHHHhhcCCceeCCCCCcccC
Confidence 589998888887764 4899997 7666433332 2568999988773
No 200
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=37.76 E-value=13 Score=25.53 Aligned_cols=40 Identities=23% Similarity=0.605 Sum_probs=29.1
Q ss_pred cccccccccCCceE---EeCCCCchhhHHhHHHHhccCCccccc
Q 010851 446 SSCVICWEAPVEGA---CVPCGHMAGCMSCLSEIKAKKGDCPVC 486 (499)
Q Consensus 446 ~~C~iC~~~~~~~~---~~pCgH~~~C~~C~~~~~~~~~~Cp~C 486 (499)
..|-.|...+.+.. .-.|++.| |.+|-.-+-..=..||.|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~F-C~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVF-CVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCB-CHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCc-ccchhHHHHhhccCCcCC
Confidence 46988988886544 33688898 999976655544469988
No 201
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=37.27 E-value=16 Score=35.17 Aligned_cols=45 Identities=22% Similarity=0.404 Sum_probs=33.5
Q ss_pred cccccccccCCceEE-eCCCCchhhHHhHHHHhc----cCCcccccccccc
Q 010851 446 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKA----KKGDCPVCRTKIN 491 (499)
Q Consensus 446 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~----~~~~Cp~Cr~~i~ 491 (499)
..|++-..+...++- ..|.|.- |++-..-+.. ..+.||+|.+.+.
T Consensus 216 L~CPlS~~ri~~P~Rg~~C~Hlq-CFDl~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 216 LMCPLGKMRLTIPCRAVTCTHLQ-CFDAALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp SBCTTTCSBCSSEEEETTCCCCC-CEEHHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred eeCCCccceeccCCcCCCCCCCc-cCCHHHHHHHHhhCCCeECCCCCcccC
Confidence 589998888887764 4899997 7766544432 2568999998874
No 202
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=37.08 E-value=17 Score=24.99 Aligned_cols=45 Identities=24% Similarity=0.496 Sum_probs=28.1
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHHHh----ccCCccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIK----AKKGDCPVCRT 488 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~----~~~~~Cp~Cr~ 488 (499)
.....|.||.+...-...--|...| ...|...-. ...+.||.|+.
T Consensus 9 ~~~~~C~vC~~~g~ll~CD~C~~~f-H~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQGGEIILCDTCPRAY-HMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCCSSEEECSSSSCEE-EHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCCCcEEECCCCChhh-hhhccCCCCCCCCCCceECccccc
Confidence 3446899999854322333566555 778876521 23468999975
No 203
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=34.24 E-value=32 Score=25.33 Aligned_cols=42 Identities=21% Similarity=0.487 Sum_probs=28.4
Q ss_pred CccccccccccCCceEEeCC---CCchhhHHhHHHHhc----------------cCCcccccc
Q 010851 444 SSSSCVICWEAPVEGACVPC---GHMAGCMSCLSEIKA----------------KKGDCPVCR 487 (499)
Q Consensus 444 ~~~~C~iC~~~~~~~~~~pC---gH~~~C~~C~~~~~~----------------~~~~Cp~Cr 487 (499)
.+..|.||-...... ++|| +-.| -..|..++.. ..+.|+.|.
T Consensus 14 ~D~~C~VC~~~t~~~-l~pCRvC~Rvf-H~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 14 NDEMCDVCEVWTAES-LFPCRVCTRVF-HDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CSCCCTTTCCCCSSC-CSSCSSSSSCC-CHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CCcccCccccccccc-eeccccccccc-cHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 447999998655444 3354 5666 8899999721 235899994
No 204
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.68 E-value=3.7 Score=29.77 Aligned_cols=46 Identities=26% Similarity=0.605 Sum_probs=31.8
Q ss_pred CCccccccccccC-----CceEEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010851 443 GSSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 443 ~~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
.....|.-|.+.+ .-.+..-|.|.+ |..|-.......+.|-+|-+.
T Consensus 23 ~~~r~CarC~~~LG~l~~~g~~C~~Ck~rV-C~~Crv~~~~~~W~C~VC~k~ 73 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPKTNTCRGCNHLV-CRDCRIQESNGTWRCKVCSGP 73 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTTTSEETTTTEEC-CTTSEEECSTTCEEEHHHHSS
T ss_pred CCccchhhhCccccccccCCCcCcccChhh-cccccccCCCCCEEEeeCchh
Confidence 4457999999876 344566899999 999954333334568888654
No 205
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.37 E-value=8.4 Score=26.04 Aligned_cols=45 Identities=24% Similarity=0.612 Sum_probs=25.6
Q ss_pred CCccccccccccCCceEEeCCCCchhhHHhHHH-Hh---ccCCccccccc
Q 010851 443 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE-IK---AKKGDCPVCRT 488 (499)
Q Consensus 443 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~---~~~~~Cp~Cr~ 488 (499)
.+...|.||.+...-...--|...| ...|... +. ...+.||.|+.
T Consensus 7 ~~~~~C~vC~~~g~ll~Cd~C~~~~-H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKSGQLLMCDTCSRVY-HLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCSSCCEECSSSSCEE-CSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCCCeEEEcCCCCcce-ECccCCCCcCCCCCCceEChhhhC
Confidence 3446899999865333333555444 5556542 11 22457998864
No 206
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=30.05 E-value=8.7 Score=26.52 Aligned_cols=48 Identities=21% Similarity=0.452 Sum_probs=26.9
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHH-Hh---ccCCccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE-IK---AKKGDCPVCRTKI 490 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~---~~~~~Cp~Cr~~i 490 (499)
+.....|.||.+...-...--|...| ...|... +. ...+.||.|+...
T Consensus 6 d~~~~~C~vC~~~g~ll~Cd~C~~~f-H~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 6 DHHMEFCRVCKDGGELLCCDTCPSSY-HIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCSSCTTTCCCSSCBCCSSSCCCB-CSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCCCcCCCCCCCCCEEEcCCCCHHH-cccccCCCcCcCCCCccCChhhcCch
Confidence 34456899998754322233455444 5556542 22 2245799997643
No 207
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=29.84 E-value=69 Score=32.34 Aligned_cols=141 Identities=14% Similarity=0.005 Sum_probs=76.6
Q ss_pred HHHHHHcCCHHHH----HHHHHcCCCCcccCCCCChHHHHHHHcCCc-------------HHHHHHHHHcCCCCCccCCC
Q 010851 21 LYQWVIAGDVDAI----RALRSQGASLEWMDKEGKTPLIVACMDSGL-------------INVAKTLIELGANINAYRPG 83 (499)
Q Consensus 21 L~~Aa~~g~~~~v----~~Ll~~g~~~~~~d~~g~TpLh~Aa~~~g~-------------~~~v~~Ll~~ga~~~~~~~d 83 (499)
|...++.|+++-. +.+.+.|..+|.. -++.|..|+...+. .++.+.+.+.|..+|..
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~--- 106 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEA--- 106 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHH---
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHH---
Confidence 4444567887544 4444577766543 25667777654222 35666677788877754
Q ss_pred CCCCcHHHHHHHcCCHHHH----HHHHHCCCCCcccCCCCCCHHHHHHHcCCHHHHHHH----HHcccccccccccccCC
Q 010851 84 GRGGTPLHHAAKRGLEPTV----RLLLSCGANALVRNDDCHTALGVARIKGHINVVRAI----ESHICYFCGWLREFYGP 155 (499)
Q Consensus 84 ~~g~TpL~~A~~~g~~~~v----~~Ll~~ga~~~~~d~~g~tpL~~A~~~g~~~~v~~L----l~~g~~~~~~~~~~~g~ 155 (499)
.-.+-+...++.|..+-+ +.+.+.|..++.... .+.|...++.|..+-+..| .+.|...+ ..-.
T Consensus 107 -tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-----~~ty 178 (501)
T 4g26_A 107 -TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVESEVVPE-----EPEL 178 (501)
T ss_dssp -HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-----HHHH
T ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-----HHHH
Confidence 122445556777887654 444456776654322 1334445677876544444 44554333 2233
Q ss_pred CHHHHHhhhcCCHHHHHHHH
Q 010851 156 SFLEALAPQLMSRKIWVVVI 175 (499)
Q Consensus 156 t~Lh~~A~~~~~~~~~~~Ll 175 (499)
+.|....+..|..+-+.-++
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHH
Confidence 44443556677755444333
No 208
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=26.22 E-value=10 Score=33.52 Aligned_cols=48 Identities=19% Similarity=0.414 Sum_probs=28.1
Q ss_pred CCCccccccccccCCceEEeCCCCchhhHHhHHH----HhccCCccccccccc
Q 010851 442 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE----IKAKKGDCPVCRTKI 490 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~----~~~~~~~Cp~Cr~~i 490 (499)
+.....|.+|.+...-..+-.|...| ...|... +-...+.||.|+..-
T Consensus 4 d~~~~~C~~C~~~g~ll~Cd~C~~~~-H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQNGGDLLCCEKCPKVF-HLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTCCCEEEEECSSSSCEE-CTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCCceEEcCCCCCcc-CCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34456899998764322233566555 6666532 112346899998643
No 209
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=25.32 E-value=51 Score=31.94 Aligned_cols=52 Identities=25% Similarity=0.542 Sum_probs=38.1
Q ss_pred CCCCCCCccccccccccCCceEEe--CCCCchhhHHhHHHHhc----------cCCccccccccc
Q 010851 438 NVKDDGSSSSCVICWEAPVEGACV--PCGHMAGCMSCLSEIKA----------KKGDCPVCRTKI 490 (499)
Q Consensus 438 ~~~~~~~~~~C~iC~~~~~~~~~~--pCgH~~~C~~C~~~~~~----------~~~~Cp~Cr~~i 490 (499)
..++++...-|.+|-+...-..+- .|...| |..|+.++.- .++.|=+|...-
T Consensus 86 ~~D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~F-C~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 86 LYDDDGYQSYCSICCSGETLLICGNPDCTRCY-CFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp CBCSSSSBCSCTTTCCCSSCEECCSTTCCCEE-CHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred ccCCCCCcccceEcCCCCeEEEeCCCCCCcch-HHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 344566677999999987655555 788888 9999988662 246898997553
No 210
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=24.72 E-value=60 Score=35.54 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=43.8
Q ss_pred CCCCccccccccccCCceEEeCCCC-chhhHHhHHHHhccCCccccccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGACVPCGH-MAGCMSCLSEIKAKKGDCPVCRTKINQ 492 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~pCgH-~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 492 (499)
+..+.-.|+|-++--.|+|.+|.|| .+ =+.++.+|-.....||+-|.++..
T Consensus 887 ~iP~~F~cPIs~~lM~DPVilpsG~~Ty-dR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 887 DVPDEFLDPLMYTIMKDPVILPASKMNI-DRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp CSCGGGBCTTTCSBCSSEEECTTTCCEE-EHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCcHHhCCcchhhHHhCCeEcCCCCEEE-CHHHHHHHHhcCCCCCCCCCCCCc
Confidence 3456679999999999999999985 66 899999988777789999998864
No 211
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=23.02 E-value=9.7 Score=28.57 Aligned_cols=48 Identities=17% Similarity=0.385 Sum_probs=28.9
Q ss_pred CCccccccccccCC---ceEEe--CCCCchhhHHhHHH--------HhccCCcccccccccc
Q 010851 443 GSSSSCVICWEAPV---EGACV--PCGHMAGCMSCLSE--------IKAKKGDCPVCRTKIN 491 (499)
Q Consensus 443 ~~~~~C~iC~~~~~---~~~~~--pCgH~~~C~~C~~~--------~~~~~~~Cp~Cr~~i~ 491 (499)
+....|.||..... +.+++ -|...| ...|... +-...+.|+.|+....
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~y-H~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLY-HQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEE-ETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeE-cCccCCCcccccccCCCCCCeeCccccchhh
Confidence 34468999997642 23333 566555 6666542 2233568999977554
No 212
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=22.00 E-value=25 Score=26.32 Aligned_cols=48 Identities=19% Similarity=0.461 Sum_probs=27.4
Q ss_pred CCCCccccccccccCCceEEeCCCCchhhHHhHHH-H---hccCCcccccccc
Q 010851 441 DDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSE-I---KAKKGDCPVCRTK 489 (499)
Q Consensus 441 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~---~~~~~~Cp~Cr~~ 489 (499)
...+...|.||.+.-.-...--|.-.| -..|... + -...+.||.|+..
T Consensus 21 ~d~n~~~C~vC~~~g~LL~CD~C~~~f-H~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 21 LDDSATICRVCQKPGDLVMCNQCEFCF-HLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSSCCSSSCSSSCCEECTTSSCEE-CTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred cCCCCCcCcCcCCCCCEEECCCCCCce-ecccCCCCCCCCcCCCcCCccccCC
Confidence 345567999999875433333454444 5555532 1 1224579999753
No 213
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=20.75 E-value=12 Score=29.90 Aligned_cols=43 Identities=26% Similarity=0.615 Sum_probs=27.9
Q ss_pred cccccccccCCc----eEEeCCCCchhhHHhHHHHhccCCcccccccc
Q 010851 446 SSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 489 (499)
Q Consensus 446 ~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 489 (499)
..|..|...+.. -..-.||..| |..|........+.|-.|...
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~if-C~~Cs~~~~~~vRVC~~C~~~ 66 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNF-CMTCSSQVGNGPRLCLLCQRF 66 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEE-CGGGEEC----CCEEHHHHHH
T ss_pred CcccCcCCccccccccccCCCCCCee-CHHHhCCCCCCceECHHHHHH
Confidence 589999987742 2345899999 999965432223457777553
No 214
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.17 E-value=20 Score=27.03 Aligned_cols=47 Identities=21% Similarity=0.320 Sum_probs=25.6
Q ss_pred CCCccccccccccCC---ceEEeCCCCchhhHHhHHH-Hh---ccCCcccccccc
Q 010851 442 DGSSSSCVICWEAPV---EGACVPCGHMAGCMSCLSE-IK---AKKGDCPVCRTK 489 (499)
Q Consensus 442 ~~~~~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~-~~---~~~~~Cp~Cr~~ 489 (499)
..+...|.||.+... -+..--|...| ...|... +. ...+.||.|+..
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~-H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNY-HIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEE-CSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchh-ccccCCCCcccCCCCCcCCccCcCc
Confidence 344568999987653 12222555444 4455542 21 224579999764
Done!