BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010853
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSK8|PP240_ARATH Pentatricopeptide repeat-containing protein At3g18020
OS=Arabidopsis thaliana GN=At3g18020 PE=2 SV=1
Length = 688
Score = 622 bits (1603), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/476 (61%), Positives = 364/476 (76%), Gaps = 3/476 (0%)
Query: 16 FPPVASLTSALA---ITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
P V + T+ + E++VA+KVFDEMR CG+ PNSLT SVL+ G L+ RDVE
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 132
LM +LWE MK E D S+ AAFANLVDS+CREGY N++F IAE+M +SVN EFA GHM
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM 313
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
IDSLCR RNHGA+R+VY+M+ +GL P SYN+I+HGLCK GGCMRAYQLLEEG +F +
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 252
PSE+TYK+L+E LC E D KAR VL+ ML K+ DRTRI NIYLR LC++ NPTE+LN
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILN 433
Query: 253 VLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGL 312
VLV MLQ C+PD TLNTVING CKMGR+++A+KVL+DM+ GKFCAPDAVT T++ GL
Sbjct: 434 VLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL 493
Query: 313 LNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVAD 372
L GR +EAL++L +VMP+ PG+V YNAV+RGLF+L + +EA VF + V AD
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 373 STTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY 432
STTYAI+IDGLC +N++D AK+FWDD++WPS HD +VYAA +KGLC+SG + +A HFLY
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 433 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
+L DSG PN+VCYN VI + +KREAYQIL EMRKNG PDAVTWRILDKLH
Sbjct: 614 DLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 44/395 (11%)
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+++ LC R A ++V+ MR RG P +V++ +++ G C+ A+++ +E G
Sbjct: 168 LMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG 227
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVL----QFMLSKKDV------------------- 228
P+ T VL+ G D+E RK++ ++M ++ D
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287
Query: 229 --------DRTRICNI---------YLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 271
+ +C + +LC + ++ M +P + N
Sbjct: 288 FNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNA 347
Query: 272 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 331
+I+G CK G A ++L + +F P T+ ++ L +A N+L ++ +
Sbjct: 348 IIHGLCKDGGCMRAYQLLEEGSEFEF-FPSEYTYKLLMESLCKELDTGKARNVLELMLRK 406
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 391
G + YN LRGL + E V ML D T VI+GLC+ ++D+
Sbjct: 407 EGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 392 AKRFWDDIVWPSNIH-DNYVYAAMIKGLCRSGKIHEAVHFLYELV-DSGVTPNIVCYNVV 449
A + DD++ D ++ GL G+ EA+ L ++ ++ + P +V YN V
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 450 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
I G KL EA + ++ K + D+ T+ I+
Sbjct: 526 IRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 273 INGFCKMGR-IEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 331
I+ C + R +EAL++L+ + + PD++ +++I L + GR EA + + +
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGY-RPDSLNLSSVIHSLCDAGRFDEA-HRRFLLFLA 118
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG--VVADSTTYAIVIDGLCESNQL 389
G+ P T N ++ L R V + ++G V T Y +++ LC ++
Sbjct: 119 SGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV 178
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 449
+A + D+ ++ D + +I G C ++ A E+ G+ PN + +V+
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 450 IDGACKLSMKREAYQILREM 469
I G K+ ++++E+
Sbjct: 239 IGGFLKMRDVETGRKLMKEL 258
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 236/474 (49%), Gaps = 22/474 (4%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L G +DVA +FD+M G LPN +TY+ L+ G + R ++ FKL M
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG----FKLLRSM 266
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
+ L N ++ +++ LCREG + EV + +M + +E +I C+ G
Sbjct: 267 ALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
H A + M + GLTPS+++Y S++H +CK G RA + L++ G P+E TY
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
LV+G + + +A +VL+ M N + C+ + + VL M +
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEA 321
PDV++ +TV++GFC+ ++EAL+V +MV K PD +T++++I G R +EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 322 LNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVID 381
+L Y+ M + G P TY A++ +E+A ++ N M+ GV+ D TY+++I+
Sbjct: 505 CDL-YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 382 GLCESNQLDEAKRFWDDIVWPSNIHDNYVY---------------AAMIKGLCRSGKIHE 426
GL + ++ EAKR + + ++ + Y ++IKG C G + E
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 427 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
A ++ P+ YN++I G C+ R+AY + +EM K+G VT
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 227/465 (48%), Gaps = 42/465 (9%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
A L + + + A VF EM V PN TY++L+RG +++ A L++
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA----LTLFD 229
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
+M+ + L N + L+D C+ +++ F++ M + +I+ LCR
Sbjct: 230 KMETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
GR S V+ M +RG + V+YN+++ G CK G +A + E ++ G PS TY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
L+ +C ++ +A + L D+ R+ R LC
Sbjct: 349 TSLIHSMCKAGNMNRAMEFL---------DQMRV-----RGLC----------------- 377
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
P+ T T+++GF + G + EA +VL +M F +P VT+ +I G G+++
Sbjct: 378 ----PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF-SPSVVTYNALINGHCVTGKME 432
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
+A+ +L + M ++G SP +V+Y+ VL G R V+EA V M+ G+ D+ TY+ +
Sbjct: 433 DAIAVL-EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 380 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGV 439
I G CE + EA +++++ D + Y A+I C G + +A+ E+V+ GV
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
P++V Y+V+I+G K S REA ++L ++ P VT+ L
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 22/356 (6%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
SL ++ G M+ A + D+MR G+ PN TY+ LV G + + A +++
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA----YRVLR 404
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
M + S + + L++ C G + + + EDM + + + ++ CRS
Sbjct: 405 EMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
A RV M ++G+ P ++Y+S++ G C+ A L EE ++ G P E TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
L+ C E DLEKA ++ M+ K + ++ + L E +L+ +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 260 TQCQPDVITLNT---------------VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 304
+ P +T +T +I GFC G + EA +V M+ GK PD
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML-GKNHKPDGTA 642
Query: 305 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEV 360
+ +I G G I++A LY+ M + G+ VT A+++ L + +V E V
Sbjct: 643 YNIMIHGHCRAGDIRKAYT-LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 297 FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR-VE 355
C + F ++ + I +AL++++ + G+ PG+++YNAVL R +R +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 356 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 415
A+ VF ML V + TY I+I G C + +D A +D + + + Y +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 416 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 475
G C+ KI + L + G+ PN++ YNVVI+G C+ +E +L EM + G +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 476 PDAVTWRILDKLHGNRGN 493
D VT+ L K + GN
Sbjct: 308 LDEVTYNTLIKGYCKEGN 325
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 26/319 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF +L + +TG+M+ A V ++M+ G+ P+ ++YS ++ G R+ DV+ A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L K R E+ + + +++L+ C + E + E+M + +EF
Sbjct: 470 --LRVK---REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I++ C G A ++ M ++G+ P +V+Y+ +++GL K A +LL +
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
+PS+ TY L+E C + + + ++ C+ TE
Sbjct: 585 ESVPSDVTYHTLIEN-CSNIEFKSVVSL-------------------IKGFCMKGMMTEA 624
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
V ML +PD N +I+G C+ G I +A + +MV F VT ++
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL-HTVTVIALVK 683
Query: 311 GLLNVGRIQEALNLLYQVM 329
L G++ E +++ V+
Sbjct: 684 ALHKEGKVNELNSVIVHVL 702
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 235/483 (48%), Gaps = 42/483 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + A + D+M G P+++T++ L+ G+ A
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + N + +V+ LC+ G ++ F + M K +
Sbjct: 135 VALVDRMVQRGCQP-----NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC+ A + M +G+ P++V+Y+S++ LC +G A QLL + I+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E +A K+ M+ K+ +D
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI-KRSID--------------------- 287
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
PD+ T N++INGFC R+++A ++ MV+ K C PD T+ T+I
Sbjct: 288 -------------PDIFTYNSLINGFCMHDRLDKAKQMFEFMVS-KDCFPDLDTYNTLIK 333
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R+++ L ++ M RG VTY +++GLF + A++VF M+ GV
Sbjct: 334 GFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D TY+I++DGLC + +L++A +D + D Y+Y MI+G+C++GK+ +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 490
L GV PN+V YN +I G C + +EAY +L++M+++G PD+ T+ L + H
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 491 RGN 493
G+
Sbjct: 513 DGD 515
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 228/485 (47%), Gaps = 49/485 (10%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ +L L + + A + D M G PN +TY V+V G+ + D++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ K+ E K E D+ + F ++DSLC+ +V++ + ++M
Sbjct: 170 FNLLNKM-EAAKIEADVVI----FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I LC GR AS+++ M ++ + P+LV++N+++ K G + A +L ++ I+
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P TY L+ G C L+KA+++ +FM+SK
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK------------------------- 319
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
C PD+ T NT+I GFCK R+E+ ++ +M + + D VT+TT+I
Sbjct: 320 ----------DCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQ 368
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
GL + G A + Q M G P I+TY+ +L GL ++E+A EVF+ M +
Sbjct: 369 GLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NIHDNYV-YAAMIKGLCRSGKIHEA 427
D Y +I+G+C++ ++D+ WD S + N V Y MI GLC + EA
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDG---WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL-DK 486
L ++ + G P+ YN +I + K + +++REMR DA T ++ +
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 544
Query: 487 LHGNR 491
LH R
Sbjct: 545 LHDGR 549
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 160/361 (44%), Gaps = 37/361 (10%)
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
PS+ +N ++ + K L E+ + G + +TY +L+ C S + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 219 LQFMLS--------------------KKDVDRTRICN---------------IYLRALCL 243
L M+ K+ D + + + L L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 244 IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 303
+E + ++ M+Q CQP+++T V+NG CK G I+ A +LN M A K A D V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DVV 186
Query: 304 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 363
F TII L + +ALN L++ M +G P +VTY++++ L R +A ++ +
Sbjct: 187 IFNTIIDSLCKYRHVDDALN-LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 364 MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423
M+ + + T+ +ID + + EA++ DD++ S D + Y ++I G C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 424 IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 483
+ +A +V P++ YN +I G CK + ++ REM GL D VT+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 484 L 484
L
Sbjct: 366 L 366
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 246/517 (47%), Gaps = 45/517 (8%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
PFP + + L SA+A + D+ + ++M++ G+ N TYS+L+ R + A
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
++ K+ + E + +++N+ L++ C +++ + M + + F
Sbjct: 137 AVLAKMMKLGYEPDIVTLNS-----LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I L R R A +V M +G P LV+Y +V+GLCK G A LL++ Q
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALC---LIKNPT 248
P Y +++ LC ++ A + M +K N +R LC + +
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 249 ELL----------NVLVF----------------------MLQTQCQPDVITLNTVINGF 276
LL NV+ F M++ PD+ T +++INGF
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 277 CKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSP 336
C R++EA K + +++ K C P+ VT+ T+I G R+ E + L ++ M QRG
Sbjct: 372 CMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL-FREMSQRGLVG 429
Query: 337 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 396
VTY ++ G F+ R + A+ VF M+ GV+ D TY+I++DGLC + +++ A +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 397 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 456
+ + D Y Y MI+G+C++GK+ + L GV PN+V Y ++ G C+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 457 SMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+K EA + REM++ G PD+ T+ L + H G+
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 218/454 (48%), Gaps = 7/454 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++D A +F +M P+ + +S L+ + + + L+ L E+M + +S N
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD----LVISLGEQM-QNLGISHN 115
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
++ L++ CR ++ + M + + +++ C R A +V
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M + G P ++N+++HGL +H A L++ + G P TY ++V GLC
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
D++ A +L+ M K I N + ALC KN + LN+ M +P+V+T N
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I C GR +A ++L+DM+ K P+ VTF+ +I + G++ EA LY M
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI 353
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R P I TY++++ G R++EAK +F M+ + TY +I G C++ ++D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
E + ++ + + Y +I G ++ + A ++V GV P+I+ Y++++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
DG C A + ++++ + PD T+ I+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 226/485 (46%), Gaps = 14/485 (2%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ + SL + + A + +M G P+S T++ L+ G+ R A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ + + DL + +V+ LC+ G ++ + + M QGK
Sbjct: 206 VALVDRMVVK-GCQPDL----VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+ID+LC + A + M +G+ P++V+YNS++ LC +G A +LL + I+
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E L +A K+ M+ + + + C+ E
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
++ M+ C P+V+T NT+I GFCK R++E +++ +M + + + VT+TT+I
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIH 439
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G A ++++ M G P I+TY+ +L GL +VE A VF + +
Sbjct: 440 GFFQARECDNA-QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NIHDNYV-YAAMIKGLCRSGKIHEA 427
D TY I+I+G+C++ ++++ WD S + N V Y M+ G CR G EA
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDG---WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL-DK 486
E+ + G P+ YN +I + K + +++REMR DA T ++ +
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Query: 487 LHGNR 491
LH R
Sbjct: 616 LHDGR 620
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 249 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 308
+ +N+ M++++ P ++ + +++ KM + + + L + + + + T++ +
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNLGISHNLYTYSIL 122
Query: 309 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 368
I ++ AL +L ++M + GY P IVT N++L G R+ +A + M+ +G
Sbjct: 123 INCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 369 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 428
DS T+ +I GL N+ EA D +V D Y ++ GLC+ G I A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 429 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
L ++ + P +V YN +ID C +A + EM G+ P+ VT+ L +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 489 GNRG 492
N G
Sbjct: 302 CNYG 305
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 42/483 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + A + D+M G P+++T++ L+ G+ A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + N + +V+ LC+ G + + M K +
Sbjct: 210 VALVDRMVQRGCQP-----NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC+ A + M +G+ P++V+Y+S++ LC +G A QLL + I+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E +A K+ M+ K+ +D
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI-KRSID--------------------- 362
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
PD+ T N+++NGFC R+++A ++ MV+ K C PD VT+ T+I
Sbjct: 363 -------------PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIK 408
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R+++ L ++ M RG VTY +++GLF + A++VF M+ GV
Sbjct: 409 GFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D TY+I++DGLC + +L++A +D + D Y+Y MI+G+C++GK+ +
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 490
L GV PN+V YN +I G C + +EAY +L++M+++G P++ T+ L + H
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 491 RGN 493
G+
Sbjct: 588 DGD 590
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 228/485 (47%), Gaps = 49/485 (10%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ +L L + + A + D M G PN +TY V+V G+ + D + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ K+ E K E D+ + F ++DSLC+ +V++ + ++M
Sbjct: 245 LNLLNKM-EAAKIEADVVI----FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I LC GR AS+++ M ++ + P+LV++N+++ K G + A +L ++ I+
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P TY LV G C L+KA+++ +FM+SK
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK------------------------- 394
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
C PDV+T NT+I GFCK R+E+ ++ +M + + D VT+TT+I
Sbjct: 395 ----------DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQ 443
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
GL + G A + Q M G P I+TY+ +L GL ++E+A EVF+ M +
Sbjct: 444 GLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NIHDNYV-YAAMIKGLCRSGKIHEA 427
D Y +I+G+C++ ++D+ WD S + N V Y MI GLC + EA
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDG---WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL-DK 486
L ++ + G PN YN +I + K + +++REMR DA T ++ +
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619
Query: 487 LHGNR 491
LH R
Sbjct: 620 LHDGR 624
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 231/458 (50%), Gaps = 15/458 (3%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAF 94
A+ V G P+++T+S LV G V A L+ ++ E MK+ DL
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE-MKQRPDL----VTV 178
Query: 95 ANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK 154
+ L++ LC +G V+E + + M + +E G +++ LC+SG + A + M +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 214
R + S+V Y+ ++ LCK G A L E G TY L+ GLC + +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 215 ARKVLQFMLSKKD----VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
K+L+ M+ + V + + +++++ L++ EL N M+ PD IT N
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNE---MITRGIAPDTITYN 354
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I+GFCK + EA ++ D++ K C PD VT++ +I R+ + + L ++
Sbjct: 355 SLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI-S 412
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+G P +TYN ++ G + ++ AKE+F M+ GV TY I++DGLC++ +L+
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+A ++ + +Y +I G+C + K+ +A L D GV P++V YNV+I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
G CK EA + R+M+++G PD T+ IL + H
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 227/479 (47%), Gaps = 54/479 (11%)
Query: 19 VASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 78
V++L + L + G + A + D M G P+ +TY ++ + ++ + + L L+
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN----SALALDLF 233
Query: 79 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 138
+M EE ++ + ++ ++DSLC++G ++ + +M + +I LC
Sbjct: 234 RKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 198
G+ ++++ M R + P +V++++++ K G + A +L E I G P T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 199 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 258
Y L++G C E+ L +A ++ M+SK
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSK--------------------------------- 379
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 318
C+PD++T + +IN +CK R+++ +++ + ++ K P+ +T+ T++ G G++
Sbjct: 380 --GCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM------LGIGVVAD 372
A L+Q M RG P +VTY +L GL + +A E+F M LGIG+
Sbjct: 437 NAAKE-LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI--- 492
Query: 373 STTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY 432
Y I+I G+C ++++D+A + + D Y MI GLC+ G + EA
Sbjct: 493 ---YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 433 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNR 491
++ + G TP+ YN++I S + +++ EM+ G + D+ T +++ + +R
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 224/478 (46%), Gaps = 47/478 (9%)
Query: 15 PFP-PVA--SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P P+ L SA+A T + D+ M G+ + T ++++ R + + A
Sbjct: 66 PLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAF 125
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
++ + W+ E + ++ F+ LV+ C EG V+E + + M + K +
Sbjct: 126 SVLGRAWKLGYEPDTIT-----FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I+ LC GR A ++ M + G P V+Y +++ LCK G A L + +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
S Y ++++ LC + + A + N E+
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLF--------------------------NEMEMK 274
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
+ + DV+T +++I G C G+ ++ K+L +M+ G+ PD VTF+ +I
Sbjct: 275 GI---------KADVVTYSSLIGGLCNDGKWDDGAKMLREMI-GRNIIPDVVTFSALIDV 324
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
+ G++ EA L Y M RG +P +TYN+++ G + + EA ++F+ M+ G
Sbjct: 325 FVKEGKLLEAKEL-YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
D TY+I+I+ C++ ++D+ R + +I I + Y ++ G C+SGK++ A
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
E+V GV P++V Y +++DG C +A +I +M+K+ + + I+ +HG
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII--IHG 499
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 236/459 (51%), Gaps = 42/459 (9%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAF 94
AY V ++ G P++ T++ L++G+ V A VL+ ++ E + + ++ N+
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS--- 198
Query: 95 ANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK 154
+V+ +CR G + + M + + F +IDSLCR G A + M
Sbjct: 199 --IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 214
+G+ S+V+YNS+V GLCK G LL++ + +P+ T+ VL++ E L++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 215 ARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVIN 274
A ++ + M+++ P++IT NT+++
Sbjct: 317 ANELYKEMITR-----------------------------------GISPNIITYNTLMD 341
Query: 275 GFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGY 334
G+C R+ EA +L+ MV K C+PD VTFT++I G V R+ + + + ++ + +RG
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKV-FRNISKRGL 399
Query: 335 SPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKR 394
VTY+ +++G + +++ A+E+F M+ GV+ D TY I++DGLC++ +L++A
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 395 FWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGAC 454
++D+ +Y +I+G+C+ GK+ +A + L GV PN++ Y V+I G C
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 455 KLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
K EA +LR+M ++G P+ T+ L + H G+
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 227/459 (49%), Gaps = 21/459 (4%)
Query: 33 DVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNA 92
D A +F EM LP+ + +S + RT+ L+ +++ E ++ N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN----LVLDFCKQL-ELNGIAHNIY 124
Query: 93 AFANLVDSLCR-------EGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGA 145
+++ CR + +V ++ + P + N +I L G+ A
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYE-PDTTTFNT------LIKGLFLEGKVSEA 177
Query: 146 SRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 205
+V M + G P +V+YNSIV+G+C+ G A LL + + TY +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 206 LCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPD 265
LC + ++ A + + M +K N +R LC + +L M+ + P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 266 VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL 325
VIT N +++ F K G+++EA ++ +M+ + +P+ +T+ T++ G R+ EA N+L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 326 YQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE 385
+M + SP IVT+ ++++G ++RV++ +VF + G+VA++ TY+I++ G C+
Sbjct: 357 -DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 386 SNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVC 445
S ++ A+ + ++V + D Y ++ GLC +GK+ +A+ +L S + IV
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 446 YNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
Y +I+G CK +A+ + + G+ P+ +T+ ++
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 202/466 (43%), Gaps = 85/466 (18%)
Query: 1 MPTGSPKPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRG 60
M G TT F +L L + G++ A + D M G P+ +TY+ +V G
Sbjct: 150 MKLGYEPDTTTF-------NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 61 VLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQG 120
+ R+ D A L+ K+ EE ++ + ++ ++DSLCR+G ++ + ++M
Sbjct: 203 ICRSGDTSLALDLLRKM-----EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 121 KSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRA 180
+ ++ LC++G+ + + ++ M R + P+++++N ++ K G A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 181 YQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRA 240
+L +E I G P+ TY L++G C ++ L +A +L M+ K ++
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 241 LCLIKNPTELLNVL---------------VFMLQTQCQ--------------------PD 265
C++K + + V ++Q CQ PD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 266 VITLNTVINGFCKMGRIEEALKVLNDMVAGK---------------------------FC 298
V+T +++G C G++E+AL++ D+ K FC
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 299 A-------PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 351
+ P+ +T+T +I GL G + EA N+L + M + G +P TYN ++R R
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEA-NILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 352 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
+ + ++ M G AD+++ +VID L S +LD K F D
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELD--KSFLD 599
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 2/252 (0%)
Query: 235 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 294
NI + C +VL +++ +PD T NT+I G G++ EA+ +++ MV
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 295 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 354
C PD VT+ +I+ G+ G AL+LL + M +R + TY+ ++ L R +
Sbjct: 187 NG-CQPDVVTYNSIVNGICRSGDTSLALDLLRK-MEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 355 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 414
+ A +F M G+ + TY ++ GLC++ + ++ D+V + + + +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 415 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 474
+ + GK+ EA E++ G++PNI+ YN ++DG C + EA +L M +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 475 NPDAVTWRILDK 486
+PD VT+ L K
Sbjct: 365 SPDIVTFTSLIK 376
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 335 SPGIVTYNAVLR-GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
S G V + LR G+ +++ ++A +F M+ + ++ + + Q +
Sbjct: 50 SNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL 108
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
F + H+ Y MI CR K A L +++ G P+ +N +I G
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 168
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTW 481
EA ++ M +NG PD VT+
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 45/97 (46%)
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 449
D+A + +++ + ++ + R+ + + + F +L +G+ NI N++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 450 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
I+ C+ AY +L ++ K G PD T+ L K
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 201/401 (50%), Gaps = 12/401 (2%)
Query: 91 NAAFA-------NLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNH 143
N++FA N + + R G + E F+ E+M +V + C +I CR G+
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 144 GASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLV 203
A++++ ++ G P +++YN ++ G CK G A +L+ + P TY ++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTIL 211
Query: 204 EGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQ 263
LC L++A +VL ML + I + A C + +L M C
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 264 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 323
PDV+T N ++NG CK GR++EA+K LNDM + C P+ +T I+ + + GR +A
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 324 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 383
LL ++ ++G+SP +VT+N ++ L R + A ++ M G +S +Y ++ G
Sbjct: 331 LLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 384 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNI 443
C+ ++D A + + +V D Y M+ LC+ GK+ +AV L +L G +P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 444 VCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ YN VIDG K +A ++L EMR L PD +T+ L
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 239/471 (50%), Gaps = 12/471 (2%)
Query: 18 PVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKL 77
P +L G+ A K+ + + G +P+ +TY+V++ G + ++ A +
Sbjct: 139 PCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA----LSV 194
Query: 78 WERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 137
+RM D+ + ++ SLC G + + + + M Q + +I++ C
Sbjct: 195 LDRMSVSPDV----VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 138 R-SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 196
R SG H A +++ MR RG TP +V+YN +V+G+CK G A + L + G P+
Sbjct: 251 RDSGVGH-AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 197 HTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVF 256
T+ +++ +C A K+L ML K NI + LC +++L
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M Q CQP+ ++ N +++GFCK +++ A++ L MV+ + C PD VT+ T++ L G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS-RGCYPDIVTYNTMLTALCKDG 428
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++++A+ +L Q + +G SP ++TYN V+ GL + + +A ++ + M + D+ TY
Sbjct: 429 KVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
+ ++ GL ++DEA +F+ + + + +++ GLC+S + A+ FL +++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKL 487
G PN Y ++I+G M +EA ++L E+ GL + ++ K+
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 216/456 (47%), Gaps = 10/456 (2%)
Query: 29 TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS 88
TGE++ +K + M + G +P+ + + L+RG R +A ++ ++ E D+
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVI 173
Query: 89 VNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRV 148
N ++ C+ G +N + + M V ++ SLC SG+ A V
Sbjct: 174 TYNV----MISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEV 226
Query: 149 VYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 208
+ M +R P +++Y ++ C+ G A +LL+E G P TY VLV G+C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 209 ESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVIT 268
E L++A K L M S NI LR++C + +L ML+ P V+T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 269 LNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV 328
N +IN C+ G + A+ +L M C P+++++ ++ G ++ A+ L +
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL-ER 404
Query: 329 MPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQ 388
M RG P IVTYN +L L + +VE+A E+ N + G TY VIDGL ++ +
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 389 LDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNV 448
+A + D++ D Y++++ GL R GK+ EA+ F +E G+ PN V +N
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 449 VIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
++ G CK A L M G P+ ++ IL
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 235/474 (49%), Gaps = 42/474 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + + A + D+M G P++ T++ L+ G+ A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + DL + +V+ LC+ G ++ + + M +GK +
Sbjct: 208 VALVDQMVQR-GCQPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+ID LC+ A + M +G+ P + +Y+S++ LC +G A +LL + I+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSID--------------------- 360
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
PD+ T +++INGFC R++EA K + +++ K C P+ VT++T+I
Sbjct: 361 -------------PDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIK 406
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R++E + L ++ M QRG VTY ++ G F+ R + A+ VF M+ +GV
Sbjct: 407 GFCKAKRVEEGMEL-FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ TY I++DGLC++ +L +A ++ + + D Y Y MI+G+C++GK+ +
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L GV+PN++ YN +I G C+ K EA +L++M+++G P++ T+ L
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 218/454 (48%), Gaps = 7/454 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++D A +F +M P+ + ++ L+ V + E L+ L E+M + +S +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE----LVISLGEQM-QTLGISHD 117
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
++ ++ CR ++ + M + + +++ C S R A +V
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M + G P ++ +++HGL H A L+++ +Q G P TY +V GLC
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
D++ A +L+ M K I N + LC K+ + LN+ M +PDV T +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I+ C GR +A ++L+DM+ K P+ VTF+ +I + G++ EA LY M
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI 355
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R P I TY++++ G R++EAK +F M+ + TY+ +I G C++ +++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
E + ++ + + Y +I G ++ A ++V GV PNI+ YN+++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
DG CK +A + ++++ + PD T+ I+
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 106/212 (50%), Gaps = 8/212 (3%)
Query: 16 FPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
FP V ++L ++ ++F EM G++ N++TY+ L+ G + RD + A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ- 453
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 132
++FK + ++ N L+D LC+ G + + + E + + + + M
Sbjct: 454 MVFKQMVSVGVHPNILTYNI----LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
I+ +C++G+ + + +G++P++++YN+++ G C+ G A LL++ + G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 224
LP+ TY L+ + D E + ++++ M S
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 226/461 (49%), Gaps = 12/461 (2%)
Query: 25 ALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEE 84
A E+D A + +M G +PNS+ Y L+ + + V A +L E M
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA----LQLLEEMFLM 281
Query: 85 EDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHG 144
+ + F +++ LC+ +NE ++ M ++ G++++ LC+ GR
Sbjct: 282 GCVP-DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 145 ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI-QFGYLPSEHTYKVLV 203
A + Y + K P +V +N+++HG HG A +L + + +G +P TY L+
Sbjct: 341 AKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 204 EGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQ 263
G E + A +VL M +K I + C + E NVL M +
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 264 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 323
P+ + N +I+ FCK RI EA+++ +M K C PD TF ++I GL V I+ AL
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 324 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 383
LL ++ + G VTYN ++ R ++EA+++ N M+ G D TY +I GL
Sbjct: 516 LLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 384 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNI 443
C + ++D+A+ ++ ++ + N +I GLCRSG + EAV F E+V G TP+I
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 444 VCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
V +N +I+G C+ + + R+++ G+ PD VT+ L
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 213/484 (44%), Gaps = 12/484 (2%)
Query: 3 TGSPKPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVL 62
TGS G+ F L L GE ++ +M+ G++ + ++R
Sbjct: 101 TGS---QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYD 157
Query: 63 RTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKS 122
+ + LM ++ E N LV C + N + DM K
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY----DMLSRKI 213
Query: 123 VNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQ 182
F G ++ + C A ++ M K G P+ V Y +++H L K A Q
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 183 LLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALC 242
LLEE G +P T+ ++ GLC + +A K++ ML + + LC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 243 LIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 302
I + L + + +P+++ NT+I+GF GR+++A VL+DMV PD
Sbjct: 334 KIGR-VDAAKDLFYRIP---KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 303 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 362
T+ ++I+G G + AL +L+ M +G P + +Y ++ G +L +++EA V N
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHD-MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 363 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 422
M G+ ++ + +I C+ +++ EA + ++ D Y + ++I GLC
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 423 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 482
+I A+ L +++ GV N V YN +I+ + +EA +++ EM G D +T+
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 483 ILDK 486
L K
Sbjct: 569 SLIK 572
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 9/422 (2%)
Query: 75 FKLWERM---KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
FK +R+ ++E + + F +++ + G+ + R+ +M S F +
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 132 MIDSLCRSGRNHG-ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
++ + SG H A+ V Y M R + P+L ++ ++ C A LL + +
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
G +P+ Y+ L+ L + + +A ++L+ M V N + LC E
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
++ ML PD IT ++NG CK+GR++ A + + P+ V F T+I
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY-----RIPKPEIVIFNTLIH 361
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G + GR+ +A +L ++ G P + TYN+++ G ++ V A EV + M G
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ +Y I++DG C+ ++DEA +++ + + +I C+ +I EAV
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 490
E+ G P++ +N +I G C++ + A +LR+M G+ + VT+ L
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 491 RG 492
RG
Sbjct: 542 RG 543
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 189/415 (45%), Gaps = 37/415 (8%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE--------------- 79
A K+ + M G P+ +TY L+ G+ + V+ A L +++ +
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT 365
Query: 80 --RMKEEEDLSVNNAAFANLVDSLC----------REGYVNEVFRIAEDMPQGKSVNEEF 127
R+ + + + + +V +C +EG V + DM +
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 128 ACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEG 187
+ ++D C+ G+ A V+ M GL P+ V +N ++ CK A ++ E
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 188 IQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL---I 244
+ G P +T+ L+ GLC +++ A +L+ M+S+ V T N + A I
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 245 KNPTELLNVLVFMLQTQCQP-DVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 303
K +L+N +VF Q P D IT N++I G C+ G +++A + M+ AP +
Sbjct: 546 KEARKLVNEMVF----QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNI 600
Query: 304 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 363
+ +I GL G ++EA+ + M RG +P IVT+N+++ GL R R+E+ +F
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKE-MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 364 MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGL 418
+ G+ D+ T+ ++ LC+ + +A D+ + + ++ ++ +++ +
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 5/196 (2%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L +A GE+ A K+ +EM G + +TY+ L++G+ R +V++A L K+
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
++S N L++ LCR G V E ++M S + +I+ LCR+G
Sbjct: 594 GHAPSNISCNI-----LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R + ++ G+ P V++N+++ LCK G A LL+EGI+ G++P+ T+
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 201 VLVEGLCGESDLEKAR 216
+L++ + + L++ R
Sbjct: 709 ILLQSIIPQETLDRRR 724
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 235/474 (49%), Gaps = 42/474 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + A + D+M PN++T++ L+ G+ A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ R + + + + +V+ LC+ G ++ + + M +GK +
Sbjct: 205 VALIDRMVARGCQPDLFT-----YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+ID+LC + A + M +G+ P++V+YNS++ LC +G A +LL + I+
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSID--------------------- 357
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
PD+ T +++INGFC R++EA K + +++ K C P+ VT+ T+I
Sbjct: 358 -------------PDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIK 403
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R++E + L ++ M QRG VTYN +++GLF+ + A+++F M+ GV
Sbjct: 404 GFCKAKRVEEGMEL-FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D TY+I++DGLC+ +L++A ++ + D Y Y MI+G+C++GK+ +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L GV PN++ Y +I G C+ +K EA + REM+++G P++ T+ L
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 219/454 (48%), Gaps = 7/454 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++D A +F EM LP+ + ++ L+ + + + L+ L ERM+ +S +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD----LVISLGERMQNLR-ISYD 114
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
++ L++ CR + + M + + +++ C R A +V
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M P+ V++N+++HGL H A L++ + G P TY +V GLC
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
D++ A +L+ M K I + ALC KN + LN+ M +P+V+T N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I C GR +A ++L+DM+ K P+ VTF+ +I + G++ EA LY M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI 352
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R P I TY++++ G R++EAK +F M+ + TY +I G C++ +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
E + ++ + + Y +I+GL ++G A ++V GV P+I+ Y++++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
DG CK +A + ++K+ + PD T+ I+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 2/236 (0%)
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M+Q++ P ++ N +++ KM + + + L + + + D ++ +I
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++ AL +L ++M + GY P IVT +++L G +R+ EA + + M + ++ T+
Sbjct: 130 QLPLALAVLGKMM-KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
+I GL N+ EA D +V D + Y ++ GLC+ G I A+ L ++
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 492
+ ++V Y +ID C +A + EM G+ P+ VT+ L + N G
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 16 FPPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
FP V + L ++ ++F EM G++ N++TY+ L++G+ + D + A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ- 450
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 132
K++++M + + + ++ L+D LC+ G + + + E + + K + + M
Sbjct: 451 ---KIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
I+ +C++G+ + + +G+ P+++ Y +++ G C+ G A L E + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 224
LP+ TY L+ + D + ++++ M S
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 231/466 (49%), Gaps = 11/466 (2%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L AL ++ A + ++M G++P+ T++ +++G + D++ A ++ E+M
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA----LRIREQM 250
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP-QGKSVNEEFACGHMIDSLCRSG 140
E S +N + +V C+EG V + ++M Q +++ +++ LC++G
Sbjct: 251 VEF-GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
A ++ VM + G P + +YNS++ GLCK G A ++L++ I P+ TY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
L+ LC E+ +E+A ++ + + SK + N ++ LCL +N + + M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDM-VAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
C+PD T N +I+ C G+++EAL +L M ++G CA +T+ T+I G + +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--CARSVITYNTLIDGFCKANKTR 487
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
EA ++ M G S VTYN ++ GL + RRVE+A ++ + M+ G D TY +
Sbjct: 488 EA-EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 380 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGV 439
+ C + +A + D Y +I GLC++G++ A L + G+
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREM-RKNGLNPDAVTWRIL 484
YN VI G + EA + REM +N PDAV++RI+
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 199/419 (47%), Gaps = 36/419 (8%)
Query: 92 AAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYV 151
+ F L+ +LCR + + EDMP V +E ++ G GA R+
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 152 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE-GIQFGYLPSEHTYKVLVEGLCGES 210
M + G + S VS N IVHG CK G A ++E Q G+ P ++T+ LV GLC
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
++ A +++ ML + N + LC + E + VL M+ C P+ +T N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 271 TVINGFCKMGRIEEALKV---------------LNDMVAG-------------------K 296
T+I+ CK ++EEA ++ N ++ G K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 297 FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEE 356
C PD T+ +I L + G++ EALN+L Q M G + ++TYN ++ G + + E
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 357 AKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIK 416
A+E+F+ M GV +S TY +IDGLC+S ++++A + D ++ D Y Y +++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 417 GLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 475
CR G I +A + + +G P+IV Y +I G CK A ++LR ++ G+N
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 175/330 (53%), Gaps = 3/330 (0%)
Query: 156 GLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 215
G+ P + ++N ++ LC+ A +LE+ +G +P E T+ +++G E DL+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 216 RKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML-QTQCQPDVITLNTVIN 274
++ + M+ N+ + C + LN + M Q PD T NT++N
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 275 GFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGY 334
G CK G ++ A+++++ M+ + PD T+ ++I GL +G ++EA+ +L Q M R
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGY-DPDVYTYNSVISGLCKLGEVKEAVEVLDQ-MITRDC 361
Query: 335 SPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKR 394
SP VTYN ++ L + +VEEA E+ + G++ D T+ +I GLC + A
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 395 FWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGAC 454
++++ D + Y +I LC GK+ EA++ L ++ SG +++ YN +IDG C
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 455 KLSMKREAYQILREMRKNGLNPDAVTWRIL 484
K + REA +I EM +G++ ++VT+ L
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 197/421 (46%), Gaps = 15/421 (3%)
Query: 21 SLTSALAITGEMDVAYKVFDEM--RHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 78
S+ S L GE+ A +V D+M R C PN++TY+ L+ + + VE A L
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCS--PNTVTYNTLISTLCKENQVEEATELA---- 388
Query: 79 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 138
R+ + + + F +L+ LC + E+M +EF +IDSLC
Sbjct: 389 -RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 198
G+ A ++ M G S+++YN+++ G CK A ++ +E G + T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 199 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 258
Y L++GLC +E A +++ M+ + N L C + + +++ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM-VAGKFCAPDAVTFTTIIFGLLNVGR 317
C+PD++T T+I+G CK GR+E A K+L + + G P A + +I GL +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRK 625
Query: 318 IQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR-LRRVEEAKEVFNCMLGIGVVADSTTY 376
EA+NL +++ Q P V+Y V RGL + EA + +L G V + ++
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
++ +GL + + + + ++ + + V +M+KGL + K +A+ L ++D
Sbjct: 686 YMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQDALATLGGVLD 743
Query: 437 S 437
S
Sbjct: 744 S 744
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 187/425 (44%), Gaps = 42/425 (9%)
Query: 62 LRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGK 121
LR++ + A + +F L + + + S A + ++ L R G +++ +I EDM +
Sbjct: 57 LRSQPDDSAALRLFNLASK---KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR 113
Query: 122 SVNEEFACGHMIDSLCR-SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRA 180
+I+S + ++ S V +++ + GL P YN +++ L G ++
Sbjct: 114 CEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKL 172
Query: 181 YQLLEEGIQ-FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 239
++ + +G P T+ VL++ LC L A +L+ M S V
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV----------- 221
Query: 240 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 299
PD T TV+ G+ + G ++ AL++ MV C+
Sbjct: 222 ------------------------PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG-CS 256
Query: 300 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 359
V+ I+ G GR+++ALN + ++ Q G+ P T+N ++ GL + V+ A E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 360 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 419
+ + ML G D TY VI GLC+ ++ EA D ++ + Y +I LC
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 420 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 479
+ ++ EA L G+ P++ +N +I G C R A ++ EMR G PD
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 480 TWRIL 484
T+ +L
Sbjct: 437 TYNML 441
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 233/474 (49%), Gaps = 11/474 (2%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
PFP + + L SA+A + D+ + ++M++ G+ N TYS+ + R + A
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
++ K+ + +++N+ L++ C ++E + + M + +
Sbjct: 131 AILGKMMKLGYGPSIVTLNS-----LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
++ L + + A +V M +G P LV+Y ++++GLCK G A LL + ++ G
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK-MEKG 244
Query: 192 YLPSEHT-YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
+ ++ Y +++GLC ++ A + M +K N + LC ++
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+L ML+ PD++ N +I+ F K G++ EA K+ ++MV K C PD V + T+I
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R++E + + ++ M QRG VTY ++ G F+ R + A+ VF M+ GV
Sbjct: 365 GFCKYKRVEEGMEV-FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D TY I++DGLC + ++ A ++ + D Y MI+ LC++GK+ +
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L GV PN+V Y ++ G C+ +K EA + EM+++G P++ T+ L
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M++++ P ++ + +++ KM + + + L + + + + T++ I
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++ AL +L ++M + GY P IVT N++L G R+ EA + + M+ +G D+ T+
Sbjct: 125 QLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
++ GL + N+ EA + +V D Y A+I GLC+ G+ A++ L ++
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ ++V YN +IDG CK +A+ + +M G+ PD T+ L
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 8/212 (3%)
Query: 16 FPPVA---SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
FP V +L ++ +VF EM G++ N++TY+ L+ G + RD + A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ- 411
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 132
++FK D+ N L+D LC G V + E M + + M
Sbjct: 412 MVFKQMVSDGVHPDIMTYNI----LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
I++LC++G+ + + +G+ P++V+Y +++ G C+ G A L E + G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 224
LP+ TY L+ + D + ++++ M S
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 230/474 (48%), Gaps = 42/474 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + + A + D+M G PN++T++ L+ G+ A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ + + DL + +V+ LC+ G + F + M QGK
Sbjct: 206 MALIDRMVAK-GCQPDL----VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+ID LC+ A + M +G+ P++V+Y+S++ LC +G A +LL + I+
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P T+ L++ E L +A K+ M+ K+ +D
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV-KRSID--------------------- 358
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
P ++T +++INGFC R++EA ++ MV+ K C PD VT+ T+I
Sbjct: 359 -------------PSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIK 404
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R++E + + ++ M QRG VTYN +++GLF+ + A+E+F M+ GV
Sbjct: 405 GFCKYKRVEEGMEV-FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ TY ++DGLC++ +L++A ++ + Y Y MI+G+C++GK+ +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L GV P++V YN +I G C+ K EA + +EM+++G P++ + L
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 222/483 (45%), Gaps = 43/483 (8%)
Query: 10 TGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVER 69
TG+ +L L + + A + D M G P+ +TY V+V G+ + D +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD- 238
Query: 70 ANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC 129
L F L +M E+ L + ++D LC+ ++++ + ++M
Sbjct: 239 ---LAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
+I LC GR ASR++ M +R + P + ++++++ K G + A +L +E ++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 249
PS TY L+ G C L++A+++ +FM+SK
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------------------------ 390
Query: 250 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 309
C PDV+T NT+I GFCK R+EE ++V +M + + + VT+ +I
Sbjct: 391 -----------HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILI 438
Query: 310 FGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
GL G A +++ M G P I+TYN +L GL + ++E+A VF + +
Sbjct: 439 QGLFQAGDCDMAQE-IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 370 VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH 429
TY I+I+G+C++ ++++ + ++ D Y MI G CR G EA
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 430 FLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL-DKLH 488
E+ + G PN CYN +I + + + ++++EMR G DA T ++ + LH
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Query: 489 GNR 491
R
Sbjct: 618 DGR 620
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 219/473 (46%), Gaps = 45/473 (9%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
PFP + + L SA+A + DV + ++M++ G+ N TYS+L+ R + A
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
++ K+ + GY + ++
Sbjct: 137 AVLGKMM------------------------KLGYEPNIVTLSS---------------- 156
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+++ C S R A +V M G P+ V++N+++HGL H A L++ + G
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
P TY V+V GLC D + A +L M K I N + LC K+ + L
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
N+ M +P+V+T +++I+ C GR +A ++L+DM+ K PD TF+ +I
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALIDA 335
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
+ G++ EA LY M +R P IVTY++++ G R++EAK++F M+
Sbjct: 336 FVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
D TY +I G C+ +++E + ++ + + Y +I+GL ++G A
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
E+V GV PNI+ YN ++DG CK +A + ++++ + P T+ I+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 2/328 (0%)
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
PS++ ++ ++ + K L E+ G + +TY +L+ C S L A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 219 LQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK 278
L M+ + L C K +E + ++ M T QP+ +T NT+I+G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 279 MGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGI 338
+ EA+ +++ MVA K C PD VT+ ++ GL G A NLL + M Q PG+
Sbjct: 199 HNKASEAMALIDRMVA-KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK-MEQGKLEPGV 256
Query: 339 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 398
+ YN ++ GL + + +++A +F M G+ + TY+ +I LC + +A R D
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 399 IVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSM 458
++ D + ++A+I + GK+ EA E+V + P+IV Y+ +I+G C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 459 KREAYQILREMRKNGLNPDAVTWRILDK 486
EA Q+ M PD VT+ L K
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 184/398 (46%), Gaps = 18/398 (4%)
Query: 1 MPTGSPKPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRG 60
M G +P Y+ ++ L MD A +F EM G+ PN +TYS L+
Sbjct: 247 MEQGKLEPGVLIYN------TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 61 VLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQG 120
+ A+ L+ + ER ++ + F+ L+D+ +EG + E ++ ++M +
Sbjct: 301 LCNYGRWSDASRLLSDMIER-----KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK- 354
Query: 121 KSVNEEFAC-GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMR 179
+S++ +I+ C R A ++ M + P +V+YN+++ G CK+
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 180 AYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 239
++ E Q G + + TY +L++GL D + A+++ + M+S N L
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 240 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 299
LC + + V ++ +++ +P + T N +I G CK G++E+ + ++ + K
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVK 533
Query: 300 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 359
PD V + T+I G G +EA + L++ M + G P YN ++R R E + E
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEA-DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 360 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
+ M G D++T +V + L +LD K F D
Sbjct: 593 LIKEMRSCGFAGDASTIGLVTNML-HDGRLD--KSFLD 627
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 233/512 (45%), Gaps = 35/512 (6%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
PFP + + L SA+A + D+ ++M GV N TY++++ + R + A
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 72 VLMFKLWE---------------------RMKE---------EEDLSVNNAAFANLVDSL 101
++ K+ + R+ E E + F LV L
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 102 CREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSL 161
+ +E + E M + G +I+ LC+ G A ++ M K + +
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240
Query: 162 VSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQF 221
V Y++++ LCK+ A L E G P TY L+ LC A ++L
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 222 MLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGR 281
ML +K N + A E + M+Q P+++T N++INGFC R
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 282 IEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTY 341
++EA ++ MV+ K C PD VT+ T+I G ++ + + L ++ M +RG VTY
Sbjct: 361 LDEAQQIFTLMVS-KDCLPDVVTYNTLINGFCKAKKVVDGMEL-FRDMSRRGLVGNTVTY 418
Query: 342 NAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW 401
++ G F+ + A+ VF M+ GV + TY ++DGLC++ +L++A ++ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 402 PSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE 461
D Y Y M +G+C++GK+ + L GV P+++ YN +I G CK +K E
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 462 AYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
AY + +M+++G PD+ T+ L + H G+
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 215/447 (48%), Gaps = 43/447 (9%)
Query: 46 GVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREG 105
G P+ +TY ++ G+ + + + A L+ K+ E+ K E D+ + ++ ++DSLC+
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVI----YSTVIDSLCKYR 254
Query: 106 YVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYN 165
+V++ + +M + F +I LC GR ASR++ M +R + P++V++N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 166 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 225
S++ K G + A +L +E IQ P+ TY L+ G C L++A+++ M+SK
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 226 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 285
C PDV+T NT+INGFCK ++ +
Sbjct: 375 -----------------------------------DCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 286 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 345
+++ DM + + + VT+TT+I G A ++++ M G P I+TYN +L
Sbjct: 400 MELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNA-QMVFKQMVSDGVHPNIMTYNTLL 457
Query: 346 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNI 405
GL + ++E+A VF + + D TY I+ +G+C++ ++++ + +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 406 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI 465
D Y MI G C+ G EA ++ + G P+ YN +I + K + ++
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 466 LREMRKNGLNPDAVTWRIL-DKLHGNR 491
++EMR DA T+ ++ D LH R
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 249 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM-VAGKFCAPDAVTFTT 307
E +++ M++++ P ++ + +++ KM + + + M + G + + T+
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG--VSHNLYTYNI 105
Query: 308 IIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGI 367
+I L ++ AL +L ++M + GY P IVT N++L G R+ EA + + M+ +
Sbjct: 106 MINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 368 GVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 427
G D+ T+ ++ GL + N+ EA + +V D Y A+I GLC+ G+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
++ L ++ + ++V Y+ VID CK +A + EM G+ PD T+ L
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 353 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 412
+++EA ++F M+ ++ ++ + + + D F + + H+ Y Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 413 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 472
MI LCR ++ A+ L +++ G P+IV N +++G C + EA ++ +M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 473 GLNPDAVTWRILDKLHG 489
G PD VT+ L +HG
Sbjct: 165 GYQPDTVTFTTL--VHG 179
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 228/472 (48%), Gaps = 8/472 (1%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L ++LA G +D +V+ EM V PN TY+ +V G + +VE AN + K+ E
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE- 246
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
L + + +L+ C+ ++ F++ +MP E A H+I LC +
Sbjct: 247 ----AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R A + M+ P++ +Y ++ LC A L++E + G P+ HTY
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
VL++ LC + EKAR++L ML K + N + C + ++V+ M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
+ P+ T N +I G+CK + +A+ VLN M+ K PD VT+ ++I G G
Sbjct: 423 KLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV-LPDVVTYNSLIDGQCRSGNFDS 480
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
A LL +M RG P TY +++ L + +RVEEA ++F+ + GV + Y +I
Sbjct: 481 AYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 440
DG C++ ++DEA + ++ + + ++ + A+I GLC GK+ EA ++V G+
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 441 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 492
P + ++I K AY ++M +G PDA T+ + + G
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 198/396 (50%), Gaps = 5/396 (1%)
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
+ L++SL R G V+E+ ++ +M + K + M++ C+ G A++ V +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
+ GL P +Y S++ G C+ A+++ E G +E Y L+ GLC ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
+A + M + R + +++LC + +E LN++ M +T +P++ T +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+ C + E+A ++L M+ K P+ +T+ +I G G I++A++++ ++M R
Sbjct: 366 DSLCSQCKFEKARELLGQMLE-KGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRK 423
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
SP TYN +++G + V +A V N ML V+ D TY +IDG C S D A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
R + + D + Y +MI LC+S ++ EA L GV PN+V Y +IDG
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
CK EA+ +L +M P+++T+ L +HG
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL--IHG 576
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 224/476 (47%), Gaps = 8/476 (1%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G F SL ++D A+KVF+EM G N + Y+ L+ G+ R ++ A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ +MK++E + L+ SLC +E + ++M +
Sbjct: 308 ----MDLFVKMKDDECFPTVRT-YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC + A ++ M ++GL P++++YN++++G CK G A ++E
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ TY L++G C +S++ KA VL ML +K + N + C N
Sbjct: 423 KLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+L M PD T ++I+ CK R+EEA + D + K P+ V +T +I
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF-DSLEQKGVNPNVVMYTALID 540
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G G++ EA +L+ + M + P +T+NA++ GL +++EA + M+ IG+
Sbjct: 541 GYCKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+T I+I L + D A + ++ D + Y I+ CR G++ +A
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
+ ++ ++GV+P++ Y+ +I G L A+ +L+ MR G P T+ L K
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 227/513 (44%), Gaps = 70/513 (13%)
Query: 30 GEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSV 89
G ++ A V + M + PN+ TY+ L++G ++ +V +A ++ K+ ER + ++
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTY 465
Query: 90 NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVV 149
N+ L+D CR G + +R+ M V +++ MIDSLC+S R A +
Sbjct: 466 NS-----LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 150 YVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGE 209
+ ++G+ P++V Y +++ G CK G A+ +LE+ + LP+ T+ L+ GLC +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 210 SDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 269
L++A + + M+ I + L + + ML + +PD T
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
T I +C+ GR+ +A ++ M +PD T++++I G ++G+ A ++L + M
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGV-SPDLFTYSSLIKGYGDLGQTNFAFDVLKR-M 698
Query: 330 PQRGYSPGIVTYNAVLRGLFRLR------------------RVEEAKEVFNCMLGIGVVA 371
G P T+ ++++ L ++ + E+ M+ V
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDI-----VWPSNIHDNYVYAAMIKGLCRSGKIHE 426
++ +Y +I G+CE L A++ +D + + PS + V+ A++ C+ K +E
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL----VFNALLSCCCKLKKHNE 814
Query: 427 AVHFLYELVDSGVTPNI------VC-----------------------------YNVVID 451
A + +++ G P + +C + ++ID
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 452 GACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
G K + Y++ M KNG + T+ +L
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 196/451 (43%), Gaps = 26/451 (5%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
SL +G D AY++ M G++P+ TY+ ++ + +++ VE A L L
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL--- 523
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
E++ ++ N + L+D C+ G V+E + E M + +I LC G
Sbjct: 524 --EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
+ A+ + M K GL P++ + ++H L K G AY ++ + G P HTY
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
++ C E L A ++ M + ++ + +VL M T
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 261 QCQPDVITLNTVINGF---------------CKMGRIEE---ALKVLNDMVAGKFCAPDA 302
C+P T ++I C M + E +++L MV P+A
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV-TPNA 760
Query: 303 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 362
++ +I G+ VG ++ A + + G SP + +NA+L +L++ EA +V +
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 363 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 422
M+ +G + + ++I GL + + + + +++ D + +I G+ + G
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Query: 423 KIHEAVHFLYELVD-SGVTPNIVCYNVVIDG 452
+ EA + L+ +++ +G + Y+++I+G
Sbjct: 881 LV-EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
NT++N + G ++E +V +M+ K C P+ T+ ++ G +G ++EA + +++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 330 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 389
+ G P TY +++ G + + ++ A +VFN M G + Y +I GLC + ++
Sbjct: 246 -EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 390 DEAKRFW----DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVC 445
DEA + DD +P+ Y +IK LC S + EA++ + E+ ++G+ PNI
Sbjct: 305 DEAMDLFVKMKDDECFPTV----RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 446 YNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 492
Y V+ID C +A ++L +M + GL P+ +T+ L + RG
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 238/517 (46%), Gaps = 45/517 (8%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P V + L SA+A T + D+ + +M G+ N T S+++ R R + A
Sbjct: 84 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM------PQGKSVNE 125
M K+ + E N F+ L++ LC EG V+E + + M P ++N
Sbjct: 144 SAMGKIIKLGYEP-----NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 126 ----------------------EFAC-------GHMIDSLCRSGRNHGASRVVYVMRKRG 156
E+ C G +++ +C+SG+ A ++ M +R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 157 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 216
+ V Y+ I+ GLCKHG A+ L E G + TY +L+ G C +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 217 KVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGF 276
K+L+ M+ +K ++ + + E + M+ PD IT ++I+GF
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 277 CKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSP 336
CK +++A +++ D++ K C P+ TF +I G RI + L L ++ M RG
Sbjct: 379 CKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL-FRKMSLRGVVA 436
Query: 337 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 396
VTYN +++G L ++ AKE+F M+ V + TY I++DGLC++ + ++A +
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 397 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 456
+ I D +Y +I G+C + K+ +A L GV P + YN++I G CK
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 457 SMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
EA + R+M ++G PD T+ IL + H G+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 211/433 (48%), Gaps = 7/433 (1%)
Query: 19 VASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 78
+ +L + L ++G+ A + D+M G PN++TY ++ + ++ A L+ K+
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM- 254
Query: 79 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 138
EE ++ ++ ++ ++D LC+ G ++ F + +M +I C
Sbjct: 255 ----EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 198
+GR ++++ M KR + P++V+++ ++ K G A +L +E I G P T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 199 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 258
Y L++G C E+ L+KA +++ M+SK R NI + C + L + M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 318
D +T NT+I GFC++G++ A ++ +MV+ K P+ VT+ ++ GL + G
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV-PPNIVTYKILLDGLCDNGES 489
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
++AL + ++ + + I YN ++ G+ +V++A ++F + GV TY I
Sbjct: 490 EKALEI-FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 379 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 438
+I GLC+ L EA+ + + + D + Y +I+ G ++V + EL G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 439 VTPNIVCYNVVID 451
+ + +VID
Sbjct: 609 FSVDASTIKMVID 621
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 281 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 340
+ ++A+ + DM+ + P + F+ + + + L L Q M +G + + T
Sbjct: 68 KADDAIDLFRDMIHSR-PLPTVIDFSRLFSAIAKTKQYDLVLALCKQ-MELKGIAHNLYT 125
Query: 341 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 400
+ ++ R R++ A ++ +G ++ T++ +I+GLC ++ EA D +V
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 401 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 460
+ D ++ GLC SGK EA+ + ++V+ G PN V Y V++ CK
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 461 EAYQILREMRKNGLNPDAVTWR-ILDKL--HGNRGNDFGL 497
A ++LR+M + + DAV + I+D L HG+ N F L
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L G+++VA ++F EM V PN +TY +L+ G+ + E+A + +F+ E+
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA-LEIFEKIEK 501
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
K E D+ + N ++ +C V++ + + +P MI LC+ G
Sbjct: 502 SKMELDIGIYNI----IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
A + M + G P +YN ++ G ++ +L+EE + G+ T K
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 201 VLVEGL 206
++++ L
Sbjct: 618 MVIDML 623
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 230/474 (48%), Gaps = 34/474 (7%)
Query: 38 VFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANL 97
++ +M CG+ P + T+++L+R + + V+ A +L++ M E+ N F L
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR----ELFDEMPEK-GCKPNEFTFGIL 188
Query: 98 VDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGL 157
V C+ G ++ + M + + ++ S CR GRN + ++V MR+ GL
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 158 TPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL----PSEHTYKVLVEGLCGESDLE 213
P +V++NS + LCK G + A ++ + YL P+ TY ++++G C LE
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
A+ + + + D+ + NI+L+ L E VL M P + + N ++
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+G CK+G + +A ++ M C PDAVT+ ++ G +VG++ A +LL ++M +
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMM-RNN 426
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
P T N +L L+++ R+ EA+E+ M G D+ T I++DGLC S +LD+A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 394 R----------------------FWDDIVWPSN-IHDNYVYAAMIKGLCRSGKIHEAVHF 430
DD + +N + D Y+ ++ GLC++G+ EA +
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
E++ + P+ V YN+ I CK A+++L++M K G + T+ L
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 230/492 (46%), Gaps = 44/492 (8%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L AL + +D A ++FDEM G PN T+ +LVRG + L K E +
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG-------LTDKGLELL 205
Query: 82 KEEEDLSV--NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
E V N + +V S CREG ++ ++ E M + V + I +LC+
Sbjct: 206 NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 140 GRNHGASRVVYVMRKR---GLT-PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPS 195
G+ ASR+ M GL P+ ++YN ++ G CK G A L E + L S
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 196 EHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLV 255
+Y + ++GL +A VL+ M K NI + LC + ++ ++
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 256 FMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNV 315
M + PD +T +++G+C +G+++ A +L +M+ C P+A T ++ L +
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKM 444
Query: 316 GRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM----------L 365
GRI EA LL + M ++GY VT N ++ GL +++A E+ M L
Sbjct: 445 GRISEAEELLRK-MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 366 G---IGVVADS----------TTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 412
G IG+V DS TY+ +++GLC++ + EAK + +++ D+ Y
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 413 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI---LREM 469
I C+ GKI A L ++ G ++ YN +I G L +K + ++I + EM
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG---LGIKNQIFEIHGLMDEM 620
Query: 470 RKNGLNPDAVTW 481
++ G++P+ T+
Sbjct: 621 KEKGISPNICTY 632
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 233/537 (43%), Gaps = 74/537 (13%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVL----PNSLTYSVLVRGVLRTRDVERANVLMFK 76
S SAL G++ A ++F +M L PNS+TY+++++G + +E A L
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL--- 313
Query: 77 LWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSL 136
+E ++E +DL+ + ++ + L R G E + + M ++ ++D L
Sbjct: 314 -FESIRENDDLA-SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 137 CRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 196
C+ G A +V +M++ G+ P V+Y ++HG C G A LL+E ++ LP+
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 197 HTYKVL-----------------------------------VEGLCGESDLEKARKVLQF 221
+T +L V+GLCG +L+KA ++++
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 222 MLSKKDVDRTRICNIY-----------------------LRALCLIKNPTELLNVLVFML 258
M + N Y L LC E N+ M+
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 318
+ QPD + N I+ FCK G+I A +VL DM K C T+ ++I GL +I
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIKNQI 610
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
E L+ + M ++G SP I TYN ++ L +VE+A + + M+ + + ++
Sbjct: 611 FEIHGLMDE-MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 379 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 438
+I+ C+ D A+ ++ V + +Y+ M L +G++ +A L ++D G
Sbjct: 670 LIEAFCKVPDFDMAQEVFETAVSICGQKEG-LYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 439 VTPNIVCYNVVIDGACKLSMKREAYQILREM--RKNGLNPDAVTWRILDKLHGNRGN 493
Y +++ CK A IL +M R G +P A+ ++D L G GN
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALM-PVIDGL-GKMGN 783
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 10/301 (3%)
Query: 194 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 253
PS + Y +L+E E +E + + M+ +T N+ +RALC +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 254 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 313
M + C+P+ T ++ G+CK G ++ L++LN M + P+ V + TI+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL-PNKVIYNTIVSSFC 228
Query: 314 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM-----LGIG 368
GR ++ ++ + M + G P IVT+N+ + L + +V +A +F+ M LG+
Sbjct: 229 REGRNDDSEKMV-EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL- 286
Query: 369 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 428
+S TY +++ G C+ L++AK ++ I ++ Y ++GL R GK EA
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 429 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
L ++ D G+ P+I YN+++DG CKL M +A I+ M++NG+ PDAVT+ L LH
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL--LH 404
Query: 489 G 489
G
Sbjct: 405 G 405
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 204/467 (43%), Gaps = 50/467 (10%)
Query: 14 SPFPPVASLTSALAITGEMDVAYKVFD--EMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
+ + S+ S A + +D A+ F R P+ Y++L+ ++ R VE +
Sbjct: 73 TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVS 132
Query: 72 VLMFKLWERMKEEEDLSVNNAA-----FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 126
L +D+ + A F L+ +LC V+ + ++MP+ E
Sbjct: 133 WLY----------KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNE 182
Query: 127 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 186
F G ++ C++G ++ M G+ P+ V YN+IV C+ G + +++E+
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
Query: 187 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN 246
+ G +P T+ + LC E + A ++ M + + R
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR-------------- 288
Query: 247 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFT 306
P+ IT N ++ GFCK+G +E+A K L + + ++
Sbjct: 289 -----------------PNSITYNLMLKGFCKVGLLEDA-KTLFESIRENDDLASLQSYN 330
Query: 307 TIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG 366
+ GL+ G+ EA +L Q M +G P I +YN ++ GL +L + +AK + M
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQ-MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 367 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 426
GV D+ TY ++ G C ++D AK +++ + + + Y ++ L + G+I E
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 427 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 473
A L ++ + G + V N+++DG C +A +I++ MR +G
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 124/308 (40%), Gaps = 38/308 (12%)
Query: 93 AFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVM 152
++ L++ LC+ G E + +M K + A I C+ G+ A RV+ M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 153 RKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDL 212
K+G SL +YNS++ GL + L++E + G P+ TY ++ LC +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 213 EKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTV 272
E A N+L M+Q P+V + +
Sbjct: 646 EDAT-----------------------------------NLLDEMMQKNIAPNVFSFKYL 670
Query: 273 INGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQR 332
I FCK+ + A +V V+ C ++ + LL G++ +A LL V+ R
Sbjct: 671 IEAFCKVPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATELLEAVL-DR 727
Query: 333 GYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA 392
G+ G Y ++ L + +E A + + M+ G D VIDGL + EA
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Query: 393 KRFWDDIV 400
F D ++
Sbjct: 788 NSFADKMM 795
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 54/316 (17%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
++L + L G A +F EM + P+S+ Y++ +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH-------------------- 567
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
C++G ++ FR+ +DM + +I L
Sbjct: 568 --------------------HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
+ ++ M+++G++P++ +YN+ + LC+ A LL+E +Q P+ ++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 200 KVLVEGLCGESDLEKARKVLQFMLS---KKDVDRTRICNIYLRALCLIKNPTELLNVLV- 255
K L+E C D + A++V + +S +K+ + + N L A L+K TELL ++
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLK-ATELLEAVLD 726
Query: 256 --FMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 313
F L T D ++ CK +E A +L+ M+ + D +I GL
Sbjct: 727 RGFELGTFLYKD------LVESLCKKDELEVASGILHKMIDRGY-GFDPAALMPVIDGLG 779
Query: 314 NVGRIQEALNLLYQVM 329
+G +EA + ++M
Sbjct: 780 KMGNKKEANSFADKMM 795
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 343 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI-VIDGLCESNQLDEAKRFWDDIV- 400
+ R L R + EE +E+ N +L + + + V+ +SN +D+A + +
Sbjct: 44 TIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRS 103
Query: 401 -WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY-ELVDSGVTPNIVCYNVVIDGACKLSM 458
+P N Y+Y +++ + ++ E V +LY ++V G+ P +N++I C S
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRV-EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSC 162
Query: 459 KREAYQILREMRKNGLNPDAVTWRILDKLHGNRG-NDFGLRI 499
A ++ EM + G P+ T+ IL + + G D GL +
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 225/470 (47%), Gaps = 42/470 (8%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + A + D+M G P+++T++ L+ G+ A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + N + +V+ LC+ G ++ F + M K
Sbjct: 210 VALVDRMVQRGCQP-----NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC+ A + M +G+ P++++Y+S++ LC + A +LL + I+
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI-KRSID--------------------- 362
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
PD+ T +++INGFC R++EA K + +++ K C P+ VT+ T+I
Sbjct: 363 -------------PDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIN 408
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G RI E + L ++ M QRG VTY ++ G F+ R + A+ VF M+ GV
Sbjct: 409 GFCKAKRIDEGVEL-FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ TY ++DGLC++ +L++A ++ + Y Y MI+G+C++GK+ +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
L GV P+++ YN +I G C+ +K EA + R+MR++G PD+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 216/454 (47%), Gaps = 7/454 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++D A +F M LP+ ++ L+ + + + + L+ L E+M + +S N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD----LVISLGEKM-QRLGISHN 119
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
+ L++ CR ++ + M + +++ C R A +V
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M + G P +++ +++HGL H A L++ +Q G P+ TY V+V GLC
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
D++ A +L M + K I + + +LC ++ + LN+ M +P+VIT +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I+ C R +A ++L+DM+ K P+ VTF +I + G++ EA LY M
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKI-NPNVVTFNALIDAFVKEGKLVEA-EKLYDEMI 357
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R P I TY++++ G R++EAK +F M+ + TY +I+G C++ ++D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
E + ++ + + Y +I G ++ A ++V GV PNI+ YN ++
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
DG CK +A + ++++ + P T+ I+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 230/474 (48%), Gaps = 12/474 (2%)
Query: 15 PFPPV---ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P + L SA+A + D+ + ++M+ G+ N TY++L+ R + A
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
L+ K+ MK + S+ ++L++ C +++ + + M + +
Sbjct: 141 ALLGKM---MKLGYEPSI--VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I L + A +V M +RG P+LV+Y +V+GLCK G A+ LL +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
+ Y +++ LC + A + M +K + + LC + ++
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
+L M++ + P+V+T N +I+ F K G++ EA K+ ++M+ + PD T++++I G
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLING 374
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
R+ EA ++ +++M + P +VTYN ++ G + +R++E E+F M G+V
Sbjct: 375 FCMHDRLDEAKHM-FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV-YAAMIKGLCRSGKIHEAVHF 430
++ TY +I G ++ D A+ + +V +H N + Y ++ GLC++GK+ +A+
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L S + P I YN++I+G CK + + + + G+ PD + + +
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 172/338 (50%), Gaps = 4/338 (1%)
Query: 152 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD 211
M++ G++ +L +YN +++ C+ A LL + ++ GY PS T L+ G C
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 212 LEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 271
+ A ++ M+ T + L L +E + ++ M+Q CQP+++T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 272 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 331
V+NG CK G I+ A +LN M A K A + V ++T+I L +ALNL + M
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTE-MEN 288
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 391
+G P ++TY++++ L R +A + + M+ + + T+ +ID + +L E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 392 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 451
A++ +D+++ S D + Y+++I G C ++ EA H ++ PN+V YN +I+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 452 GACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
G CK E ++ REM + GL + VT+ L +HG
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL--IHG 444
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 231/470 (49%), Gaps = 21/470 (4%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++ +A+ ++ G P+++T+S L+ G+ V A L+ ++ E M + L
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE-MGHKPTLITL 180
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
NA LV+ LC G V++ + + M + E G ++ +C+SG+ A ++
Sbjct: 181 NA----LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M +R + V Y+ I+ GLCK G A+ L E G+ Y L+ G C
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 211 DLEKARKVLQFMLSKK---DVDRTRICNIYLRAL--CLIKNPT--ELLNVLVFMLQTQCQ 263
+ K+L+ M+ +K DV + AL C +K E + M+Q
Sbjct: 297 RWDDGAKLLRDMIKRKITPDV-------VAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 264 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 323
PD +T ++I+GFCK ++++A +L+ MV+ K C P+ TF +I G I + L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVS-KGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 324 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 383
L ++ M RG VTYN +++G L ++E AKE+F M+ V D +Y I++DGL
Sbjct: 409 L-FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 384 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNI 443
C++ + ++A ++ I D +Y +I G+C + K+ +A L GV P++
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 444 VCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
YN++I G CK EA + R+M ++G +P+ T+ IL + H G+
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 210/431 (48%), Gaps = 7/431 (1%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L + L + G++ A + D M G PN +TY +++ + ++ A L+ K+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM--- 238
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
EE + ++ ++ ++D LC++G ++ F + +M + +I C +G
Sbjct: 239 --EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R ++++ M KR +TP +V++++++ K G A +L +E IQ G P TY
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
L++G C E+ L+KA +L M+SK R NI + C + L + M
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
D +T NT+I GFC++G++E A ++ +MV+ + PD V++ ++ GL + G ++
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-RPDIVSYKILLDGLCDNGEPEK 475
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
AL + ++ + + I YN ++ G+ +V++A ++F + GV D TY I+I
Sbjct: 476 ALEI-FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 440
GLC+ L EA + + + + Y +I+ G ++ + E+ G +
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 441 PNIVCYNVVID 451
+ +V+D
Sbjct: 595 VDASTVKMVVD 605
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 185/391 (47%), Gaps = 2/391 (0%)
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
F+ L + R + V + + M + + MI+ CR + A + +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
K G P V+++++++GLC G A +L++ ++ G+ P+ T LV GLC +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
A ++ M+ L+ +C + +L M + + + D + + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+G CK G ++ A + N+M F A D + +TT+I G GR + LL M +R
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKA-DIIIYTTLIRGFCYAGRWDDGAKLLRD-MIKRK 312
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
+P +V ++A++ + ++ EA+E+ M+ G+ D+ TY +IDG C+ NQLD+A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
D +V + + +I G C++ I + + ++ GV + V YN +I G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
C+L A ++ +EM + PD V+++IL
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 145/366 (39%), Gaps = 77/366 (21%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
++L G++ A ++ EM G+ P+++TY+ L+ G + +++AN ++
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML----- 375
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
DL V+ N+ F I +I+ C++
Sbjct: 376 ------DLMVSKGCGPNI-----------RTFNI------------------LINGYCKA 400
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
+ M RG+ V+YN+++ G C+ G A +L +E + P +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
K+L++GLC + EKA ++ + + K I NI + +C + ++ +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
+PDV T N +I G CK G + EA
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEA---------------------------------- 546
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
+LL++ M + G+SP TYN ++R ++ ++ + G D++T +V
Sbjct: 547 ---DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 380 IDGLCE 385
+D L +
Sbjct: 604 VDMLSD 609
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 226/458 (49%), Gaps = 7/458 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++ A+ ++ G P+++ ++ L+ G+ V A L+ ++ E + +++N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
LV+ LC G V++ + + M + E G +++ +C+SG+ A ++
Sbjct: 198 T-----LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M +R + V Y+ I+ GLCK G A+ L E G+ TY L+ G C
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
+ K+L+ M+ +K ++ + + E +L M+Q P+ IT N
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I+GFCK R+EEA++++ D++ K C PD +TF +I G RI + L L ++ M
Sbjct: 373 SLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLEL-FREMS 430
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
RG VTYN +++G + ++E AK++F M+ V D +Y I++DGLC++ +L+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+A + I D +Y +I G+C + K+ +A L GV + YN++I
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
C+ +A + R+M + G PD +T+ IL + H
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 236/458 (51%), Gaps = 11/458 (2%)
Query: 33 DVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNA 92
D A +F +M LP + ++ L + +T+ E L+ L ++M E + ++ +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE----LVLALCKQM-ESKGIAHSIY 124
Query: 93 AFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVM 152
+ +++ CR ++ F + + + +++ LC R A +V M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 153 RKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDL 212
+ G P+L++ N++V+GLC +G A L++ ++ G+ P+E TY ++ +C
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 213 EKARKVLQFMLSKK-DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 271
A ++L+ M + +D + +I + LC + N+ M + D+IT NT
Sbjct: 245 ALAMELLRKMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 272 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 331
+I GFC GR ++ K+L DM+ K +P+ VTF+ +I + G+++EA LL ++M Q
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKI-SPNVVTFSVLIDSFVKEGKLREADQLLKEMM-Q 361
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 391
RG +P +TYN+++ G + R+EEA ++ + M+ G D T+ I+I+G C++N++D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 392 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 451
+ ++ I + Y +++G C+SGK+ A E+V V P+IV Y +++D
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 452 GACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
G C +A +I ++ K+ + D + I+ +HG
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMII--IHG 517
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 221/464 (47%), Gaps = 42/464 (9%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L + L + G++ A + D M G PN +TY ++ + ++ A L+ K+
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM--- 254
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
EE ++ ++ ++ ++D LC++G ++ F + +M + +I C +G
Sbjct: 255 --EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R ++++ M KR ++P++V+++ ++ K G A QLL+E +Q G P+ TY
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
L++G C E+ LE+A +++ M+SK
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISK----------------------------------- 397
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
C PD++T N +ING+CK RI++ L++ +M A + VT+ T++ G G+++
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEV 456
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
A L+Q M R P IV+Y +L GL +E+A E+F + + D Y I+I
Sbjct: 457 A-KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 440
G+C ++++D+A + + D Y MI LCR + +A ++ + G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 441 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
P+ + YN++I A +++ EM+ +G D T +++
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 172/387 (44%), Gaps = 45/387 (11%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF + +L G D K+ +M + PN +T+SVL+ ++ + A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ L+ ++ +R ++ N + +L+D C+E + E ++ + M +
Sbjct: 353 DQLLKEMMQR-----GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I+ C++ R + M RG+ + V+YN++V G C+ G A +L +E +
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P +YK+L++GLC +LEKA ++ ++++++
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFG------KIEKSKM----------------E 505
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
L++ ++M+ +I+G C ++++A + + K DA + +I
Sbjct: 506 LDIGIYMI-------------IIHGMCNASKVDDAWDLFCSLPL-KGVKLDARAYNIMIS 551
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
L + +A ++L++ M + G++P +TYN ++R A E+ M G
Sbjct: 552 ELCRKDSLSKA-DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWD 397
AD +T +VI+ L S +LD K F D
Sbjct: 611 ADVSTVKMVINML-SSGELD--KSFLD 634
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 233/505 (46%), Gaps = 58/505 (11%)
Query: 15 PFPPV-ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD------- 66
P P + SL A +G+ AYK+ +M CG +P + Y++L+ + +D
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 67 ----------------VERANVLMFK--LWERMKEEEDLSV-----------NNAAFANL 97
+ + NV F L K E+ SV + + ++ +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 98 VDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGL 157
++ LC + F + E+M +G V + + M+DS C++G A + MR+ G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 158 TPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARK 217
TP++V+Y +++H K A +L E + G LP+ TY L++G C +EKA +
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 218 VLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFC 277
+ + M KDV ++Y + + +E +P+V+T +++GFC
Sbjct: 610 IFERMCGSKDVPDV---DMYFKQY---DDNSE-------------RPNVVTYGALLDGFC 650
Query: 278 KMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG 337
K R+EEA K+L D ++ + C P+ + + +I GL VG++ EA + + M + G+
Sbjct: 651 KSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE-MSEHGFPAT 708
Query: 338 IVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
+ TY++++ F+++R + A +V + ML + Y +IDGLC+ + DEA +
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Query: 398 DIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 457
+ + Y AMI G GKI + L + GV PN V Y V+ID CK
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 458 MKREAYQILREMRKNGLNPDAVTWR 482
A+ +L EM++ +R
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYR 853
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 229/537 (42%), Gaps = 76/537 (14%)
Query: 8 PTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDV 67
P T FY+ L S L + A + MR LPN +TYS L+ G L + +
Sbjct: 300 PDTVFYT------KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 68 ERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ-------- 119
R ++ M E + F +LV + C G + +++ + M +
Sbjct: 354 GRCKRVL-----NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 120 ------------------------GKSVNEEFACGHMIDS---------LCRSGRNHGAS 146
K+ +E A G +++ LC +G+ A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 147 RVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGL 206
V+ M +G P +Y+ +++ LC A+ L EE + G + +TY ++V+
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 207 CGESDLEKARKVLQFM----LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQC 262
C +E+ARK M + V T + + YL+A + EL ML C
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFET---MLSEGC 584
Query: 263 QPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA---------------PDAVTFTT 307
P+++T + +I+G CK G++E+A ++ M K P+ VT+
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 308 IIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGI 367
++ G R++EA LL M G P + Y+A++ GL ++ +++EA+EV M
Sbjct: 645 LLDGFCKSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 368 GVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 427
G A TY+ +ID + + D A + ++ S + +Y MI GLC+ GK EA
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ + + G PN+V Y +IDG + ++L M G+ P+ VT+R+L
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 208/470 (44%), Gaps = 57/470 (12%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
+ + G ++ A K F+EMR G PN +TY+ L+ L+ + V AN +L+E M
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN----ELFETM 579
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSV------------NEE--- 126
E L N ++ L+D C+ G V + +I E M K V N E
Sbjct: 580 LSEGCLP-NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 127 -FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLE 185
G ++D C+S R A +++ M G P+ + Y++++ GLCK G A ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 186 EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIK 245
E + G+ + +TY L++ + A KVL ML I + LC +
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 246 NPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTF 305
E ++ M + CQP+V+T +I+GF +G+IE L++L M K AP+ VT+
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM-GSKGVAPNYVTY 817
Query: 306 TTIIFGLLNVGRIQEALNLLYQV--------------------------------MPQRG 333
+I G + A NLL ++ + Q
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFN--CMLGIGVVADSTTYAIVIDGLCESNQLDE 391
+P + Y ++ L + +R+E A + +V S+TY +I+ LC +N+++
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 392 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTP 441
A + + ++ I + + ++IKGL R+ KI EA+ L + + V P
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL-LLLDFISHMVCP 986
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 216/514 (42%), Gaps = 72/514 (14%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFD------------------------------ 40
GF + + + L +M++A+ +F+
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 41 -----EMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFA 95
EMR G PN +TY+ L+ L+ + V AN +L+E M E L N ++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN----ELFETMLSEGCLP-NIVTYS 592
Query: 96 NLVDSLCREGYVNEVFRIAEDMPQGKSV------------NEE----FACGHMIDSLCRS 139
L+D C+ G V + +I E M K V N E G ++D C+S
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
R A +++ M G P+ + Y++++ GLCK G A ++ E + G+ + +TY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
L++ + A KVL ML I + LC + E ++ M +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
CQP+V+T +I+GF +G+IE L++L M K AP+ VT+ +I G +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTT---- 375
A NLL + M Q + Y V+ G + E E + IG D T
Sbjct: 832 VAHNLLEE-MKQTHWPTHTAGYRKVIEGFNK-----EFIESLGLLDEIG--QDDTAPFLS 883
Query: 376 -YAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNY--VYAAMIKGLCRSGKIHEAVHFLY 432
Y ++ID L ++ +L+ A R +++ S +Y Y ++I+ LC + K+ A
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 433 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 466
E+ GV P + + +I G + S EA +L
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 195/472 (41%), Gaps = 46/472 (9%)
Query: 43 RHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLC 102
R G + Y+ LV ++R D + + ++ + KE F ++ L
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKE---------VFGEFLNVLV 207
Query: 103 REGYVNEVFRIA-EDMPQGKSVN-----EEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 156
R+ N F IA E++ + K + C +I + ++ R AS + M
Sbjct: 208 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNC--LIQAFLKADRLDSASLIHREMSLAN 265
Query: 157 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 216
L + + LCK G A L+E ++P Y L+ GLC S E+A
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 217 KVLQFMLSKKDVDRTRIC--NI--YLRALCLIKNPTEL---LNVLVFMLQTQCQPDVITL 269
L M R C N+ Y LC N +L VL M+ C P
Sbjct: 323 DFLNRM-------RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
N++++ +C G A K+L MV P V + +I + +++LN +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICG---DKDSLNCDLLDL 431
Query: 330 PQRGYS----PGIV----TYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVID 381
++ YS G+V ++ R L + E+A V M+G G + D++TY+ V++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 382 GLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTP 441
LC +++++ A ++++ + D Y Y M+ C++G I +A + E+ + G TP
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 442 NIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
N+V Y +I K A ++ M G P+ VT+ L H G
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 240/480 (50%), Gaps = 10/480 (2%)
Query: 17 PPVASLTSALAI---TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P V T+A+ G+++ A K+F +M GV PN +T++ ++ G+ + A +
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMI 133
K+ ER E ++ ++ LV L R + + + + ++M + ++I
Sbjct: 331 KEKMVERGMEPTLIT-----YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385
Query: 134 DSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL 193
DS +G + A + +M +GL+ + +YN+++ G CK+G A +LL+E + G+
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 445
Query: 194 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 253
++ ++ ++ LC + A + + ML + + + LC ++ L +
Sbjct: 446 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 505
Query: 254 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 313
L D T N +++G C+ G+++EA ++ +++ G+ C D V++ T+I G
Sbjct: 506 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISGCC 564
Query: 314 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADS 373
++ EA L + M +RG P TY+ ++ GLF + +VEEA + ++ G++ D
Sbjct: 565 GKKKLDEAFMFLDE-MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623
Query: 374 TTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE 433
TY+++IDG C++ + +E + F+D+++ + + VY +I+ CRSG++ A+ +
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683
Query: 434 LVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+ G++PN Y +I G +S EA + EMR GL P+ + L +G G
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 221/474 (46%), Gaps = 9/474 (1%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
++ L + G D A+ ++M G+ P +TYS+LV+G+ R + + A F L E
Sbjct: 313 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA---YFVLKEM 369
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM-PQGKSVNEEFACGHMIDSLCRS 139
K+ N + NL+DS G +N+ I + M +G S+ +I C++
Sbjct: 370 TKK--GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKN 426
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
G+ A R++ M G + S+ S++ LC H A + + E + P
Sbjct: 427 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 486
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
L+ GLC KA ++ L+K V TR N L LC E + +L
Sbjct: 487 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 546
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
C D ++ NT+I+G C +++EA L++MV + PD T++ +I GL N+ +++
Sbjct: 547 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVE 605
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
EA+ + + G P + TY+ ++ G + R EE +E F+ M+ V ++ Y +
Sbjct: 606 EAIQF-WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Query: 380 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGV 439
I C S +L A +D+ ++ Y ++IKG+ ++ EA E+ G+
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
PN+ Y +IDG KL + +LREM ++P+ +T+ ++ + GN
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 778
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 209/459 (45%), Gaps = 8/459 (1%)
Query: 34 VAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAA 93
+A VF + + G+ P+ T ++L+ ++R + ++ + + +S +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK------GVSPDVYL 275
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
F +++ C+ G V E ++ M + +ID L GR A M
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
+RG+ P+L++Y+ +V GL + AY +L+E + G+ P+ Y L++ L
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
KA ++ M+SK + N ++ C +L ML + + +VI
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
C + AL+ + +M+ +P TT+I GL G+ +AL L +Q + +G
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNM-SPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKG 513
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
+ T NA+L GL +++EA + +LG G V D +Y +I G C +LDEA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
F D++V DNY Y+ +I GL K+ EA+ F + +G+ P++ Y+V+IDG
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 492
CK E + EM + P+ V + L + + G
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 190/452 (42%), Gaps = 48/452 (10%)
Query: 16 FPP----VASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA- 70
FPP +L + G ++ A ++ D M G+ S TY+ L++G + + A
Sbjct: 374 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 433
Query: 71 -----------NV---------------LMFKLWERMKEE---EDLSVNNAAFANLVDSL 101
NV LMF R E ++S L+ L
Sbjct: 434 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 493
Query: 102 CREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSL 161
C+ G ++ + V + ++ LC +G+ A R+ + RG
Sbjct: 494 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 553
Query: 162 VSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQF 221
VSYN+++ G C A+ L+E ++ G P +TY +L+ CG ++ K + +QF
Sbjct: 554 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKVEEAIQF 610
Query: 222 MLSKKDVDRTRIC------NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 275
D R + ++ + C + E M+ QP+ + N +I
Sbjct: 611 W---DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 667
Query: 276 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 335
+C+ GR+ AL++ DM K +P++ T+T++I G+ + R++EA LL++ M G
Sbjct: 668 YCRSGRLSMALELREDM-KHKGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLE 725
Query: 336 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 395
P + Y A++ G +L ++ + + + M V + TY ++I G + EA R
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785
Query: 396 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 427
+++ + D+ Y I G + G + EA
Sbjct: 786 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 38/304 (12%)
Query: 173 KHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTR 232
K GC A + G PS+ T +L+ L ++ +K
Sbjct: 216 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK------------------ 257
Query: 233 ICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM 292
C +C PDV T IN FCK G++EEA+K+ + M
Sbjct: 258 -CCEAFDVVC-----------------KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 299
Query: 293 VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 352
AP+ VTF T+I GL GR EA + + M +RG P ++TY+ +++GL R +
Sbjct: 300 EEAG-VAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAK 357
Query: 353 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 412
R+ +A V M G + Y +ID E+ L++A D +V + Y
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 413 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 472
+IKG C++G+ A L E++ G N + VI C M A + + EM
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 473 GLNP 476
++P
Sbjct: 478 NMSP 481
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 1 MPTGSPKPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRG 60
M + + +P T Y+ L A +G + +A ++ ++M+H G+ PNS TY+ L++G
Sbjct: 649 MMSKNVQPNTVVYN------HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 61 VLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQG 120
+ VE A +L +E M+ E L N + L+D + G + +V + +M
Sbjct: 703 MSIISRVEEAKLL----FEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757
Query: 121 KSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRA 180
+ MI R G ASR++ MR++G+ P ++Y ++G K GG + A
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Query: 181 YQLLEEGIQFGYLPSEHTYKVLVEG 205
++ E Y ++EG
Sbjct: 818 FK----------GSDEENYAAIIEG 832
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 37 KVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFAN 96
+ FDEM V PN++ Y+ L+R R+ + A +L E MK + +S N+A + +
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA----LELREDMKHK-GISPNSATYTS 698
Query: 97 LVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 156
L+ + V E + E+M F +ID + G+ ++ M +
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 157 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 216
+ P+ ++Y ++ G + G A +LL E + G +P TYK + G + + +A
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Query: 217 K 217
K
Sbjct: 819 K 819
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 5/398 (1%)
Query: 86 DLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGA 145
++S N +F ++ +LC+ +V+ + MP+ K + + + ++D LC+ R A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 146 SRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 205
++ M+ G +PS V YN ++ GLCK G R +L++ G +P+E TY L+ G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 206 LCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPD 265
LC + L+KA +L+ M+S K + + L + T+ + +L M + +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 266 VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL 325
+ +I+G K G+ EEA+ + M A K C P+ V ++ ++ GL G+ EA +L
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 326 YQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE 385
+ M G P TY+++++G F+ EEA +V+ M G + Y+++IDGLC
Sbjct: 421 NR-MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 386 SNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELV---DSGVTPN 442
++ EA W ++ D Y+++IKGLC G + A+ +E++ + P+
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 443 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
+V YN+++DG C A +L M G +PD +T
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 211/408 (51%), Gaps = 10/408 (2%)
Query: 47 VLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGY 106
+ PN L+++++++ + + R V+RA +++ M E + L + + L+D LC+E
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRA----IEVFRGMPERKCLP-DGYTYCTLMDGLCKEER 237
Query: 107 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 166
++E + ++M +ID LC+ G +++V M +G P+ V+YN+
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 167 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 226
++HGLC G +A LLE + +P++ TY L+ GL + A ++L M +
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 227 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 286
I ++ + L E +++ M + C+P+++ + +++G C+ G+ EA
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 287 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 346
++LN M+A C P+A T+++++ G G +EA+ + ++ M + G S Y+ ++
Sbjct: 418 EILNRMIASG-CLPNAYTYSSLMKGFFKTGLCEEAVQV-WKEMDKTGCSRNKFCYSVLID 475
Query: 347 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW---PS 403
GL + RV+EA V++ ML IG+ D+ Y+ +I GLC +D A + + +++ P
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535
Query: 404 NIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 451
+ D Y ++ GLC I AV L ++D G P+++ N ++
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 185/344 (53%), Gaps = 3/344 (0%)
Query: 157 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 216
++P+ +S+N ++ LCK RA ++ + LP +TY L++GLC E +++A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 217 KVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGF 276
+L M S+ I N+ + LC + T + ++ M C P+ +T NT+I+G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 277 CKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSP 336
C G++++A+ +L MV+ K C P+ VT+ T+I GL+ R +A+ LL M +RGY
Sbjct: 303 CLKGKLDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYHL 360
Query: 337 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 396
Y+ ++ GLF+ + EEA ++ M G + Y++++DGLC + +EAK
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 397 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 456
+ ++ + + Y Y++++KG ++G EAV E+ +G + N CY+V+IDG C +
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 457 SMKREAYQILREMRKNGLNPDAVTW-RILDKLHGNRGNDFGLRI 499
+EA + +M G+ PD V + I+ L G D L++
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 9/383 (2%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L L +D A + DEM+ G P+ + Y+VL+ G+ + D+ R L+ ++ +
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
N + L+ LC +G +++ + E M K + + G +I+ L +
Sbjct: 287 -----GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R A R++ M +RG + Y+ ++ GL K G A L + + G P+ Y
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
VLV+GLC E +A+++L M++ + + ++ E + V M +T
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
C + + +I+G C +GR++EA+ V + M+ PD V +++II GL +G +
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDA 520
Query: 321 ALNLLYQVMPQR--GYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
AL L ++++ Q P +VTYN +L GL + + A ++ N ML G D T
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Query: 379 VIDGLCE-SNQLDEAKRFWDDIV 400
++ L E SN D+ + F +++V
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELV 603
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 194/413 (46%), Gaps = 35/413 (8%)
Query: 14 SPFPPVAS-LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
SP P + + L L G++ K+ D M G +PN +TY+ L+ G+ +++A
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA-- 311
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ-GKSVNEEFACGH 131
L ERM + + N+ + L++ L ++ + R+ M + G +N+
Sbjct: 312 --VSLLERMVSSKCIP-NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY-SV 367
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I L + G+ A + M ++G P++V Y+ +V GLC+ G A ++L I G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRIC-NIYLRALCLIKNPTEL 250
LP+ +TY L++G E+A +V + M K R + C ++ + LC + E
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGK--FCAPDAVTFTTI 308
+ V ML +PD + +++I G C +G ++ ALK+ ++M+ + PD VT+ +
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 309 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL-------------------- 348
+ GL I A++LL M RG P ++T N L L
Sbjct: 547 LDGLCMQKDISRAVDLL-NSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 349 -FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA-KRFWDDI 399
+ +RV A + MLG + ++T+A+++ +C+ +++ A + W ++
Sbjct: 606 LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNL 658
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 214/457 (46%), Gaps = 8/457 (1%)
Query: 24 SALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKE 83
L GE+D A ++ + G P+ +TY+ L+ G+ + + A V + K+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN---- 314
Query: 84 EEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNH 143
E L ++ + L+ C+ G V RI D V ++F +ID LC G +
Sbjct: 315 -EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 144 GASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLV 203
A + +G+ P+++ YN+++ GL G + A QL E + G +P T+ +LV
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 204 EGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQ 263
GLC + A +++ M+SK NI + L +L ML
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 264 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 323
PDV T N+++NG CK + E+ ++ MV K CAP+ TF ++ L ++ EAL
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 324 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADST-TYAIVIDG 382
LL + M + +P VT+ ++ G + ++ A +F M V+ ST TY I+I
Sbjct: 553 LLEE-MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 383 LCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 442
E + A++ + ++V D Y Y M+ G C++G ++ FL E++++G P+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 443 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 479
+ VI+ C EA I+ M + GL P+AV
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 231/494 (46%), Gaps = 37/494 (7%)
Query: 12 FYSPFPPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 68
FY P V S + S L +G D A+KV+ MR G+ P+ ++++ ++ +T
Sbjct: 104 FYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPH 163
Query: 69 RANVLM-------------------------------FKLWERMKEEEDLSVNNAAFANL 97
A L+ ++L+ +M +S+ + F L
Sbjct: 164 AALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS-GVSLCLSTFNKL 222
Query: 98 VDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGL 157
+ LC++G V E ++ + + + + F I LC+ G GA R+V + ++G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 158 TPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARK 217
P +++YN++++GLCK+ A L + + G P +TY L+ G C ++ A +
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 218 VLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFC 277
++ + V + LC L + L +P+VI NT+I G
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 278 KMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG 337
G I EA ++ N+M + K P+ TF ++ GL +G + +A L+ +VM +GY P
Sbjct: 403 NQGMILEAAQLANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADGLV-KVMISKGYFPD 460
Query: 338 IVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
I T+N ++ G ++E A E+ + ML GV D TY +++GLC++++ ++ +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 398 DIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 457
+V + + + +++ LCR K+ EA+ L E+ + V P+ V + +IDG CK
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 458 MKREAYQILREMRK 471
AY + R+M +
Sbjct: 581 DLDGAYTLFRKMEE 594
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 219/467 (46%), Gaps = 18/467 (3%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
L L G++ K+ D++ GVLPN TY++ ++G+ + +++ A ++ L E+
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNE-----EFACGHMIDS 135
+ + ++ NN L+ LC+ N F+ AE + GK VNE + +I
Sbjct: 281 GPKPDVITYNN-----LIYGLCK----NSKFQEAE-VYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 136 LCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPS 195
C+ G A R+V G P +Y S++ GLC G RA L E + G P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 196 EHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLV 255
Y L++GL + + +A ++ M K + + NI + LC + ++ ++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 256 FMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNV 315
M+ PD+ T N +I+G+ ++E AL++L D++ PD T+ +++ GL
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 316 GRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTT 375
+ ++ + Y+ M ++G +P + T+N +L L R R+++EA + M V D+ T
Sbjct: 510 SKFEDVMET-YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 376 YAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNY-VYAAMIKGLCRSGKIHEAVHFLYEL 434
+ +IDG C++ LD A + + + + Y +I + A E+
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 435 VDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 481
VD + P+ Y +++DG CK Y+ L EM +NG P T
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 190/419 (45%), Gaps = 19/419 (4%)
Query: 75 FKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ--GKSVNEEFACGHM 132
+++ M++E + + ++++ L G + + DM + G + E G M
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAM 83
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
+ R G+ A V M P++ SYN+I+ L G +A+++ G
Sbjct: 84 -KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN------ 246
P +++ + ++ C S A ++L M S+ C + + A C +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-------CEMNVVAYCTVVGGFYEEN 195
Query: 247 -PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTF 305
E + ML + + T N ++ CK G ++E K+L D V + P+ T+
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL-DKVIKRGVLPNLFTY 254
Query: 306 TTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCML 365
I GL G + A+ ++ ++ Q G P ++TYN ++ GL + + +EA+ M+
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 366 GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIH 425
G+ DS TY +I G C+ + A+R D V+ + D + Y ++I GLC G+ +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 426 EAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
A+ E + G+ PN++ YN +I G M EA Q+ EM + GL P+ T+ IL
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 176/387 (45%), Gaps = 4/387 (1%)
Query: 103 REGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLV 162
R+G V E + E M F+ ++ L SG A +V MR RG+TP +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 163 SYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 222
S+ + CK A +LL G + Y +V G E+ + ++ M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 223 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 282
L+ N LR LC + E +L +++ P++ T N I G C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 283 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN 342
+ A++++ ++ + PD +T+ +I+GL + QEA L + M G P TYN
Sbjct: 268 DGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK-MVNEGLEPDSYTYN 325
Query: 343 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWP 402
++ G + V+ A+ + + G V D TY +IDGLC + + A +++ +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 403 SNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREA 462
+ +Y +IKGL G I EA E+ + G+ P + +N++++G CK+ +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 463 YQILREMRKNGLNPDAVTWRILDKLHG 489
+++ M G PD T+ IL +HG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL--IHG 470
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHC-GVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 78
+L G++D AY +F +M V ++ TY++++ +V A L ++
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 79 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 138
+R L + + +VD C+ G VN ++ +M + + G +I+ LC
Sbjct: 630 DRC-----LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVS 163
R + A+ +++ M ++GL P V+
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAVN 709
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 225/454 (49%), Gaps = 15/454 (3%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
+++ A +F +M P+ + ++ L+ +++ + + ++ L ++M E L +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKM---EVLGIR 117
Query: 91 NA--AFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRV 148
N F +++ C V+ I M + + G +++ CR R A +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 149 VYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 208
V M + G P +V+YN+I+ LCK A+ +E + G P+ TY LV GLC
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 209 ESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVF--MLQTQCQPDV 266
S A ++L M+ KK + L A +KN L +F M++ PD+
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAF--VKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 267 ITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLY 326
+T +++ING C RI+EA ++ D++ K C D V++ T+I G R+++ + L +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL-F 353
Query: 327 QVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCES 386
+ M QRG VTYN +++G F+ V++A+E F+ M G+ D TY I++ GLC++
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 387 NQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCY 446
+L++A ++D+ D Y +I+G+C++GK+ EA L G+ P+IV Y
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 447 NVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
++ G C + E + +M++ GL + T
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 205/432 (47%), Gaps = 12/432 (2%)
Query: 15 PFPPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
PFP + L SA+ + DV + +M G+ + T+++++ V A
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
++ K+ + E + +++ +LV+ CR V++ + + M + + A
Sbjct: 141 SILGKMLKLGYEPDRVTI-----GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+IDSLC++ R + A + ++G+ P++V+Y ++V+GLC A +LL + I+
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK-DVDRTRICNIYLRALCLIKNPTEL 250
P+ TY L++ + +A+++ + M+ D D ++ + LCL E
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL-INGLCLHDRIDEA 314
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+ M+ C DV++ NT+INGFCK R+E+ +K+ +M + + + VT+ T+I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQ 373
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G G + +A Q M G SP I TYN +L GL +E+A +F M +
Sbjct: 374 GFFQAGDVDKAQEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D TY VI G+C++ +++EA + + D Y M+ GLC G +HE
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 431 LYELVDSGVTPN 442
++ G+ N
Sbjct: 493 YTKMKQEGLMKN 504
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 187/388 (48%), Gaps = 37/388 (9%)
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
F L+ ++ + + V + + M N+ + +I+ C + A ++ M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
K G P V+ S+V+G C+ A L+++ ++ GY P Y +++ LC
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC------ 201
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
K ++V K+++R I +P+V+T ++
Sbjct: 202 KTKRVNDAFDFFKEIERKGI-----------------------------RPNVVTYTALV 232
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
NG C R +A ++L+DM+ K P+ +T++ ++ + G++ EA L ++ M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKEL-FEEMVRMS 290
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
P IVTY++++ GL R++EA ++F+ M+ G +AD +Y +I+G C++ ++++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
+ + ++ + + Y +I+G ++G + +A F ++ G++P+I YN+++ G
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTW 481
C +A I +M+K ++ D VT+
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTY 438
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 164/327 (50%), Gaps = 4/327 (1%)
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
PS+V +N ++ + K L ++ G +T+ +++ C + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 219 LQFMLS-KKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFC 277
L ML + DR I ++ + C ++ ++++ M++ +PD++ N +I+ C
Sbjct: 143 LGKMLKLGYEPDRVTIGSL-VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 278 KMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG 337
K R+ +A + + K P+ VT+T ++ GL N R +A LL M ++ +P
Sbjct: 202 KTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD-MIKKKITPN 259
Query: 338 IVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
++TY+A+L + +V EAKE+F M+ + + D TY+ +I+GLC +++DEA + +D
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 398 DIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 457
+V + D Y +I G C++ ++ + + E+ G+ N V YN +I G +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 458 MKREAYQILREMRKNGLNPDAVTWRIL 484
+A + +M G++PD T+ IL
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 165/367 (44%), Gaps = 7/367 (1%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ + SL + + A + D+M G P+ + Y+ ++ + +T+ V A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
F ++ + E + + N + LV+ LC ++ R+ DM + K
Sbjct: 210 ----FDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
++D+ ++G+ A + M + + P +V+Y+S+++GLC H A Q+ + +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
G L +Y L+ G C +E K+ + M + V T N ++ + +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
M PD+ T N ++ G C G +E+AL + DM + D VT+TT+I
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIR 443
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G+ G+++EA + L+ + +G P IVTY ++ GL + E + ++ M G++
Sbjct: 444 GMCKTGKVEEAWS-LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 371 ADSTTYA 377
+ T +
Sbjct: 503 KNDCTLS 509
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 230/493 (46%), Gaps = 42/493 (8%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
S+ +AL MD A +V + M GV+P+ +TY+ ++ G + + A + K+
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM--- 292
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP---------------QGKSVNE 125
+ + + ++ L+D LC+ G E +I + M QG +
Sbjct: 293 --RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 126 EFACGH--------------------MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYN 165
H +I + + G+ A V MR++GL P+ V+Y
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 166 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 225
+++ LCK G A E+ I G P Y L+ GLC + E+A +++ ML +
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 226 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 285
T N + + C E + M++ +P+VIT NT+ING+C G+++EA
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 286 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 345
+K+L+ MV+ P+ VT++T+I G + R+++AL +L++ M G SP I+TYN +L
Sbjct: 531 MKLLSGMVSVGL-KPNTVTYSTLINGYCKISRMEDAL-VLFKEMESSGVSPDIITYNIIL 588
Query: 346 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNI 405
+GLF+ RR AKE++ + G + +TY I++ GLC++ D+A + + ++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 406 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI 465
+ + MI L + G+ EA +G+ PN Y ++ + + E Q+
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 466 LREMRKNGLNPDA 478
M NG D+
Sbjct: 709 FLSMEDNGCTVDS 721
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 226/468 (48%), Gaps = 7/468 (1%)
Query: 17 PPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFK 76
P + L + + MD+ V M G +PN +Y++L++G+ + A L+
Sbjct: 127 PLLKGLCADKRTSDAMDI---VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 77 LWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSL 136
+ + V ++ +++ +EG ++ + +M + + +I +L
Sbjct: 184 MADDRGGGSPPDV--VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAAL 241
Query: 137 CRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 196
C++ A V+ M K G+ P ++YNSI+HG C G A L++ G P
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 197 HTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVF 256
TY +L++ LC +ARK+ M + L+ E+ +L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M++ PD + +I + K G++++A+ V + M P+AVT+ +I L G
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSG 420
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
R+++A+ L ++ M G SPG + YN+++ GL + E A+E+ ML G+ ++ +
Sbjct: 421 RVEDAM-LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
+ID C+ ++ E+++ ++ +V + Y +I G C +GK+ EA+ L +V
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
G+ PN V Y+ +I+G CK+S +A + +EM +G++PD +T+ I+
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 220/485 (45%), Gaps = 16/485 (3%)
Query: 4 GSPKPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLR 63
G G VA + A A++ +A DE V P+ TY +L+ R
Sbjct: 45 GRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADE-----VTPDLCTYGILIGCCCR 99
Query: 64 TRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIA-EDMPQGKS 122
R ++ L +K+ V+ AF L+ LC + ++ I M +
Sbjct: 100 A---GRLDLGFAALGNVIKK--GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 123 VNEEFACGHMIDSLCRSGRNHGASRVVYVM---RKRGLTPSLVSYNSIVHGLCKHGGCMR 179
+ F+ ++ LC R+ A ++++M R G P +VSY ++++G K G +
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 180 AYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 239
AY E + G LP TY ++ LC ++KA +VL M+ + N L
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 240 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 299
C P E + L M +PDV+T + +++ CK GR EA K+ + M +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK-RGLK 333
Query: 300 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 359
P+ T+ T++ G G + E LL +M + G P ++ ++ + +V++A
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLL-DLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 360 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 419
VF+ M G+ ++ TY VI LC+S ++++A +++ ++ N VY ++I GLC
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 420 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 479
K A + E++D G+ N + +N +ID CK E+ ++ M + G+ P+ +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVI 512
Query: 480 TWRIL 484
T+ L
Sbjct: 513 TYNTL 517
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 7/433 (1%)
Query: 64 TRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSV 123
RD A V + R +E ++ + + L+ CR G ++ F ++ +
Sbjct: 61 ARDSPAAAVSRYNRMARAGADE-VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119
Query: 124 NEEFACGHMIDSLCRSGRNHGASRVVYV-MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQ 182
+ A ++ LC R A +V M + G P++ SYN ++ GLC A +
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 183 LLE---EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 239
LL + G P +Y ++ G E D +KA ML + + N +
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIA 239
Query: 240 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 299
ALC + + + VL M++ PD +T N++++G+C G+ +EA+ L M +
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV-E 298
Query: 300 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 359
PD VT++ ++ L GR EA + + M +RG P I TY +L+G + E
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKI-FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 360 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 419
+ + M+ G+ D ++I+I + ++D+A + + + Y A+I LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 420 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 479
+SG++ +A+ + +++D G++P + YN +I G C + A +++ EM G+ + +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 480 TWRILDKLHGNRG 492
+ + H G
Sbjct: 478 FFNSIIDSHCKEG 490
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 191/416 (45%), Gaps = 16/416 (3%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L A A G++D A VF +MR G+ PN++TY ++ + ++ VE A + +E+M
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY----FEQM 432
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFR----IAEDMPQGKSVNEEFACGHMIDSLC 137
+E LS N + +L+ LC N+ R I E + +G +N F +IDS C
Sbjct: 433 IDE-GLSPGNIVYNSLIHGLCT---CNKWERAEELILEMLDRGICLNTIFF-NSIIDSHC 487
Query: 138 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEH 197
+ GR + ++ +M + G+ P++++YN++++G C G A +LL + G P+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 198 TYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFM 257
TY L+ G C S +E A + + M S NI L+ L + + V +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 258 LQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGR 317
++ Q ++ T N +++G CK ++AL++ ++ +A TF +I LL VGR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL-KLEARTFNIMIDALLKVGR 666
Query: 318 IQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYA 377
EA +L + G P TY + + +EE ++F M G DS
Sbjct: 667 NDEAKDL-FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 378 IVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE 433
++ L + ++ A + ++ + A++ L GK E FL E
Sbjct: 726 FIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPE 780
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 213/448 (47%), Gaps = 7/448 (1%)
Query: 30 GEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSV 89
G + A+ + M G P+ ++YS +V G R ++++ ++KL E MK + L
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK----VWKLIEVMKRK-GLKP 314
Query: 90 NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVV 149
N+ + +++ LCR + E +M + + + +ID C+ G AS+
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 150 YVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGE 209
Y M R +TP +++Y +I+ G C+ G + A +L E G P T+ L+ G C
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 210 SDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 269
++ A +V M+ + LC + +L M + QP++ T
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
N+++NG CK G IEEA+K++ + A A D VT+TT++ G + +A +L + M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKE-M 552
Query: 330 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 389
+G P IVT+N ++ G +E+ +++ N ML G+ ++TT+ ++ C N L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 449
A + D+ D Y ++KG C++ + EA E+ G + ++ Y+V+
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 450 IDGACKLSMKREAYQILREMRKNGLNPD 477
I G K EA ++ +MR+ GL D
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 189/399 (47%), Gaps = 2/399 (0%)
Query: 90 NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVV 149
N A++ ++ +C+ G + E + M + + +++ CR G +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 150 YVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGE 209
VM+++GL P+ Y SI+ LC+ A + E I+ G LP Y L++G C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 210 SDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 269
D+ A K M S+ + C I + E + M +PD +T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
+ING+CK G +++A +V N M+ C+P+ VT+TT+I GL G + A LL++ M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHE-M 482
Query: 330 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 389
+ G P I TYN+++ GL + +EEA ++ G+ AD+ TY ++D C+S ++
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 449
D+A+ +++ + ++ G C G + + L ++ G+ PN +N +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 450 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
+ C + + A I ++M G+ PD T+ L K H
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 187/362 (51%), Gaps = 2/362 (0%)
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I +C+ GR A ++ +M +G TP ++SY+++V+G C+ G + ++L+E + G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
P+ + Y ++ LC L +A + M+ + + T + + C +
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
M PDV+T +I+GFC++G + EA K+ ++M K PD+VTFT +I G
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELING 430
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
G +++A + + M Q G SP +VTY ++ GL + ++ A E+ + M IG+
Sbjct: 431 YCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
+ TY +++GLC+S ++EA + + D Y ++ C+SG++ +A L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNR 491
E++ G+ P IV +NV+++G C M + ++L M G+ P+A T+ L K + R
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 492 GN 493
N
Sbjct: 610 NN 611
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 206/455 (45%), Gaps = 24/455 (5%)
Query: 56 VLVRGVLRTRDVERANVLMFKLWERMK----------------EEEDLSVNNAAFANLVD 99
+++ + ++D++ A L+ WER K +D + F
Sbjct: 124 IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQ 183
Query: 100 SLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY-VMRKRGLT 158
L G + E R+ E M V +C + L + + +V+ + G+
Sbjct: 184 VLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC 243
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
++ SYN ++H +C+ G A+ LL GY P +Y +V G C +L+K K+
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 219 LQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK 278
++ M K + I + LC I E M++ PD + T+I+GFCK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 279 MGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGI 338
G I A K +M + PD +T+T II G +G + EA L ++ M +G P
Sbjct: 364 RGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE-MFCKGLEPDS 421
Query: 339 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 398
VT+ ++ G + +++A V N M+ G + TY +IDGLC+ LD A +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 399 IVWPSNIHDN-YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 457
+ W + N + Y +++ GLC+SG I EAV + E +G+ + V Y ++D CK
Sbjct: 482 M-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 458 MKREAYQILREMRKNGLNPDAVTWRILDK---LHG 489
+A +IL+EM GL P VT+ +L LHG
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 193/401 (48%), Gaps = 19/401 (4%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
+L G++ A K F EM + P+ LTY+ ++ G + D+ A L +++
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
+ L ++ F L++ C+ G++ + FR+ M Q +ID LC+
Sbjct: 415 K-----GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
G A+ +++ M K GL P++ +YNSIV+GLCK G A +L+ E G TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL---IKNPTELLNVLVF 256
L++ C +++KA+++L+ ML K N+ + CL +++ +LLN +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN---W 586
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
ML P+ T N+++ +C ++ A + DM + + PD T+ ++ G
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS-RGVGPDGKTYENLVKGHCKAR 645
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++EA L+Q M +G+S + TY+ +++G + ++ EA+EVF+ M G+ AD +
Sbjct: 646 NMKEAW-FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKG 417
D + + D D+I+ +NY+ ++G
Sbjct: 705 DFFSDTKYKGKRPDTIVDPIDEII------ENYLVDEQLRG 739
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 231/481 (48%), Gaps = 17/481 (3%)
Query: 10 TGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVER 69
T + F ++ L + A+ V M G N +++L++G+ R + +
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 70 ANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC 129
A L+ R L + ++ ++ C + + +A +M
Sbjct: 161 AVSLL-----REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
G +ID+ C++G+ A + M+ GL LV Y S++ G C G R L +E ++
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIY-----LRALCLI 244
G P TY L+ G C L++A ++ +FM ++R N+Y + LC +
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM-----IERGVRPNVYTYTGLIDGLCGV 330
Query: 245 KNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 304
E L +L M++ +P+ +T N +IN CK G + +A++++ +++ + PD +T
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNIT 389
Query: 305 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYS-PGIVTYNAVLRGLFRLRRVEEAKEVFNC 363
+ ++ GL G + EA LLY ++ Y+ P +++YNA++ GL + R+ +A ++++
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 364 MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423
++ D T I+++ ++ +++A W I + ++ Y AMI G C++G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 424 IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 483
++ A L ++ S + P++ YN ++ CK +A+++ EM+++ PD V++ I
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 484 L 484
+
Sbjct: 570 M 570
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 220/451 (48%), Gaps = 7/451 (1%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAF 94
A + EMR ++P+ +Y+ ++RG +++E+A +L MK S + +
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA----LELANEMKGS-GCSWSLVTW 215
Query: 95 ANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK 154
L+D+ C+ G ++E ++M + +I C G + + +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 214
RG +P ++YN+++ G CK G A ++ E I+ G P+ +TY L++GLCG ++
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 215 ARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVIN 274
A ++L M+ K + NI + LC + + ++ M + + +PD IT N ++
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 275 GFCKMGRIEEALKVLNDMVA-GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
G C G ++EA K+L M+ + PD +++ +I GL R+ +AL+ +Y ++ ++
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD-IYDLLVEKL 454
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
+ VT N +L + V +A E++ + +V +S TY +IDG C++ L+ AK
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
+ + Y ++ LC+ G + +A E+ P++V +N++IDG+
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
K + A +L M + GL+PD T+ L
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 207/458 (45%), Gaps = 42/458 (9%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L A G+MD A EM+ G+ + + Y+ L+RG +++R L ++ ER
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
++ N L+ C+ G + E I E M + + +ID LC G+
Sbjct: 278 DSPCAITYN-----TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
A +++ +M ++ P+ V+YN I++ LCK G A +++E + P TY +
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
L+ GLC + DL++A K+L ML KD T
Sbjct: 393 LLGGLCAKGDLDEASKLLYLML--KDSSYT------------------------------ 420
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEA 321
PDVI+ N +I+G CK R+ +AL + D++ K A D VT ++ L G + +A
Sbjct: 421 -DPDVISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 322 LNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADST-TYAIVI 380
+ L Q+ + TY A++ G + + AK + C + + + S Y ++
Sbjct: 479 MELWKQISDSK-IVRNSDTYTAMIDGFCKTGMLNVAKGLL-CKMRVSELQPSVFDYNCLL 536
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 440
LC+ LD+A R ++++ +N D + MI G ++G I A L + +G++
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 441 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDA 478
P++ Y+ +I+ KL EA +M +G PDA
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 200/460 (43%), Gaps = 10/460 (2%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G + SL GE+D +FDE+ G P ++TY+ L+RG + ++ A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ + + ER + N + L+D LC G E ++ M +
Sbjct: 302 SEIFEFMIER-----GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I+ LC+ G A +V +M+KR P ++YN ++ GLC G A +LL ++
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 191 GYL--PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPT 248
P +Y L+ GLC E+ L +A + ++ K NI L + +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 249 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 308
+ + + + ++ + T +I+GFCK G + A +L M + P + +
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL-QPSVFDYNCL 535
Query: 309 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 368
+ L G + +A L ++ M + P +V++N ++ G + ++ A+ + M G
Sbjct: 536 LSSLCKEGSLDQAWRL-FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 369 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 428
+ D TY+ +I+ + LDEA F+D +V D ++ +++K G+ +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 429 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE-AYQILR 467
+ +LVD + + V+D C S + A ++LR
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 187/416 (44%), Gaps = 23/416 (5%)
Query: 30 GEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSV 89
G++ A ++F+ M GV PN TY+ L+ G+ + A L+ + E+ +E
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP----- 350
Query: 90 NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVV 149
N + +++ LC++G V + I E M + ++ + ++ LC G AS+++
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 150 YVMRKRG--LTPSLVSYNSIVHGLCKHGGCMRA---YQLLEEGIQFGYLPSEHTYKVLVE 204
Y+M K P ++SYN+++HGLCK +A Y LL E + G T +L+
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLN 467
Query: 205 GLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV----LVFMLQT 260
D+ KA ++ + + K V + + C T +LNV L M +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC----KTGMLNVAKGLLCKMRVS 523
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
+ QP V N +++ CK G +++A ++ +M PD V+F +I G L G I+
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIMIDGSLKAGDIKS 582
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
A +LL M + G SP + TY+ ++ +L ++EA F+ M+ G D+ V+
Sbjct: 583 AESLLVG-MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
+ D+ +V + D + ++ +C S + L + D
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
ML+T + ++L+ ++ + +M + A VL M+ F A + ++ GL
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGF-AFNVYNHNILLKGLCRNL 156
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
+A++LL + M + P + +YN V+RG + +E+A E+ N M G G T+
Sbjct: 157 ECGKAVSLLRE-MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
I+ID C++ ++DEA F ++ + D VY ++I+G C G++ E+++
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR-ILDKLHG 489
G +P + YN +I G CKL +EA +I M + G+ P+ T+ ++D L G
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 325 LYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLC 384
Y+ M + V+ + +L ++R+ A V ML G + + I++ GLC
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 385 ESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIV 444
+ + +A ++ S + D + Y +I+G C ++ +A+ E+ SG + ++V
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 445 CYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ ++ID CK EA L+EM+ GL D V + L
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 232/511 (45%), Gaps = 55/511 (10%)
Query: 14 SPFPPVASLTS---ALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
S P V +L++ L +A ++F++M G+ P+ Y+ ++R + +D+ RA
Sbjct: 187 SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC- 129
++ + E VN + L+D LC++ V E I +D+ GK + +
Sbjct: 247 KEMIAHM-----EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA-GKDLKPDVVTY 300
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
++ LC+ ++ M +PS + +S+V GL K G A L++ +
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM----LSKKDVDRTRICNIYLRALCLIK 245
FG P+ Y L++ LC +A + M L DV + + +++ R L
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL-- 418
Query: 246 NPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTF 305
L+ L M+ T + V N++ING CK G I A + +M+ K P VT+
Sbjct: 419 --DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL-EPTVVTY 475
Query: 306 TTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCML 365
T+++ G + G+I +AL L Y M +G +P I T+ +L GLFR + +A ++FN M
Sbjct: 476 TSLMGGYCSKGKINKALRL-YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 366 GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGL------- 418
V + TY ++I+G CE + +A F ++ + D Y Y +I GL
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 419 ----------------------------CRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
CR GK+ EA+ E+V GV ++VCY V+I
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTW 481
DG+ K ++ + +L+EM GL PD V +
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 225/487 (46%), Gaps = 44/487 (9%)
Query: 38 VFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANL 97
+FD M G+ PN +TYS+L+ R ++ A L F L E + LSV + +L
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA--LSF-LGEMVDTGLKLSV--YPYNSL 443
Query: 98 VDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGL 157
++ C+ G ++ +M K ++ C G+ + A R+ + M +G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 158 TPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARK 217
PS+ ++ +++ GL + G A +L E ++ P+ TY V++EG C E D+ KA +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 218 VLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFC 277
L+ M K V T + LCL +E + + + C+ + I +++GFC
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 278 KMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG 337
+ G++EEAL V +MV + D V + +I G L + LL + M RG P
Sbjct: 624 REGKLEEALSVCQEMVQ-RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE-MHDRGLKPD 681
Query: 338 IVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKR--- 394
V Y +++ + +EA +++ M+ G V + TY VI+GLC++ ++EA+
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 395 ----------------FWD-------DIVWPSNIH---------DNYVYAAMIKGLCRSG 422
F D D+ +H + Y +I+G CR G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 423 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 482
+I EA + ++ GV+P+ + Y +I+ C+ + ++A ++ M + G+ PD V +
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 483 ILDKLHG 489
L +HG
Sbjct: 862 TL--IHG 866
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 214/476 (44%), Gaps = 13/476 (2%)
Query: 10 TGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVER 69
TG P SL + G++ A EM + + P +TY+ L+ G + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 70 ANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC 129
A +L+ M + ++ + F L+ L R G + + ++ +M +
Sbjct: 491 A----LRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
MI+ C G A + M ++G+ P SY ++HGLC G A ++ +G+
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLH 604
Query: 190 FGYLP-SEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRIC-NIYLRALCLIKNP 247
G +E Y L+ G C E LE+A V Q M+ ++ VD +C + + K+
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV-QRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 248 TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTT 307
+L M +PD + ++I+ K G +EA + D++ + C P+ VT+T
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTYTA 722
Query: 308 IIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR-RVEEAKEVFNCMLG 366
+I GL G + EA L ++ P P VTY L L + +++A E+ N +L
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781
Query: 367 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 426
G++A++ TY ++I G C +++EA ++ D Y MI LCR + +
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 427 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 482
A+ + + G+ P+ V YN +I G C +A ++ EM + GL P+ T R
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 174/335 (51%), Gaps = 4/335 (1%)
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
++ K L P + + ++++HGL K A +L + + G P + Y ++ LC
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 211 DLEKARKVLQFMLSKK-DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 269
DL +A++++ M + DV+ N+ + LC + E + + + +PDV+T
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPY-NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
T++ G CK+ E L+++++M+ +F +P ++++ GL G+I+EALNL+ +V+
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRF-SPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 330 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 389
G SP + YNA++ L + R+ EA+ +F+ M IG+ + TY+I+ID C +L
Sbjct: 360 -DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 449
D A F ++V Y Y ++I G C+ G I A F+ E+++ + P +V Y +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 450 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ G C +A ++ EM G+ P T+ L
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%)
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
R+ + + + ++ + P + T +A+L GL + R A E+FN M+ +G+ D Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
VI LCE L AK + + Y +I GLC+ K+ EAV +L
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREM 469
+ P++V Y ++ G CK+ +++ EM
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 341 YNAVLRGLFRLRRVEEAKEVFNCML-GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDI 399
++ +++ R RRV + VF M+ + ++ + T + ++ GL + A ++D+
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 400 VWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMK 459
V D Y+Y +I+ LC + A + + +G NIV YNV+IDG CK
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 460 REAYQILREMRKNGLNPDAVTW 481
EA I +++ L PD VT+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTY 300
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 219/466 (46%), Gaps = 20/466 (4%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLM-----------FKLWE 79
++ + F ++ G P+ +T++ L+ G+ + A L L++
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC-GHMIDSLCR 138
+M E L+ F L++ LC EG V E + M GK ++ + G +++ +C+
Sbjct: 216 QMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCK 273
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 198
G A ++ M + + P +V Y++I+ LCK G A L E ++ G P+ T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 199 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 258
Y +++G C A+++L+ M+ ++ N + A E + ML
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 318
PD +T N++I GFCK R ++A K + D++A +PD VTF TII R+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMA----SPDVVTFNTIIDVYCRAKRV 448
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
E + LL ++ +RG TYN ++ G + + A+++F M+ GV D+ T I
Sbjct: 449 DEGMQLLREI-SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 379 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 438
++ G CE+ +L+EA ++ I D Y +I G+C+ K+ EA L G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 439 VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
V P++ YNV+I G C S +A + +M+ NG PD T+ L
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 24/475 (5%)
Query: 22 LTSALAITGEMDV-----AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFK 76
++ ALA+ G M A +FD+M G+ P +T++ L+ G+ V A L+ K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 77 LWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSL 136
+ + L ++ + +V+ +C+ G + M + + +ID L
Sbjct: 252 MVGK-----GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 137 CRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 196
C+ G + A + M ++G+ P++ +YN ++ G C G A +LL + I+ P
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 197 HTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVF 256
T+ L+ E L +A K+ ML + T N + C +
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFDDAKH 422
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M PDV+T NT+I+ +C+ R++E +++L + ++ + + T+ T+I G V
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE-ISRRGLVANTTTYNTLIHGFCEVD 481
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
+ A +L +Q M G P +T N +L G ++EEA E+F + + D+ Y
Sbjct: 482 NLNAAQDL-FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIH----DNYVYAAMIKGLCRSGKIHEAVHFLY 432
I+I G+C+ +++DEA WD + IH D Y MI G C I +A +
Sbjct: 541 NIIIHGMCKGSKVDEA---WD-LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 433 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKL 487
++ D+G P+ YN +I G K ++ +++ EMR NG + DA T +++ L
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 34/398 (8%)
Query: 7 KPTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 66
KP YS ++ L G A +F EM G+ PN TY+ ++ G
Sbjct: 293 KPDVVIYS------AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 67 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 126
A L+ + ER +++ + F L+ + +EG + E ++ ++M +
Sbjct: 347 WSDAQRLLRDMIER-----EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 127 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 186
MI C+ R A + +M +P +V++N+I+ C+ QLL E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 187 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN 246
+ G + + TY L+ G C +L A+ + Q M+S T CNI L C +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 247 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA------- 299
E L + + ++ D + N +I+G CK +++EA + FC+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--------FCSLPIHGVE 569
Query: 300 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 359
PD T+ +I G I +A N+L+ M G+ P TYN ++RG + ++++ E
Sbjct: 570 PDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 360 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 397
+ + M G D+ T +V D L +LD K F D
Sbjct: 629 LISEMRSNGFSGDAFTIKMVAD-LITDGRLD--KSFSD 663
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 222/479 (46%), Gaps = 26/479 (5%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L L G++D A+++ D M+ G+ PN T +++V + +++ ++ A +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF------- 435
Query: 82 KEEEDLSV---NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 138
EE D V + F +L+D L + G V++ +++ E M +I +
Sbjct: 436 -EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 139 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 198
GR ++ M + +P L N+ + + K G + + EE ++P +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 199 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 258
Y +L+ GL + ++ M + V TR NI + C + +L M
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 259 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 318
+P V+T +VI+G K+ R++EA +L + K + V ++++I G VGRI
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAY-MLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
EA +L ++M Q+G +P + T+N++L L + + EA F M + + TY I
Sbjct: 674 DEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 379 VIDGLCESNQLDEAKRFWDDI----VWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYEL 434
+I+GLC+ + ++A FW ++ + PS I Y MI GL ++G I EA
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS----YTTMISGLAKAGNIAEAGALFDRF 788
Query: 435 VDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL---NPDAVTWRILDKLHGN 490
+G P+ CYN +I+G + +A+ + E R+ GL N V +LD LH N
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV--LLDTLHKN 845
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 208/471 (44%), Gaps = 10/471 (2%)
Query: 12 FYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
F F +L A + D+ +F +M+ G P ++ L+RG + V+ A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA- 222
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
L + MK L + + +DS + G V+ ++ ++ +E
Sbjct: 223 ---LSLLDEMKSSS-LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
MI LC++ R A + + K P +YN+++ G G AY LLE G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD-VDRTRICNIYLRALCLIKNPTEL 250
+PS Y ++ L +++A KV + M KKD NI + LC
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+ M + P+V T+N +++ CK +++EA + +M K C PD +TF ++I
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLID 455
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
GL VGR+ +A +Y+ M + Y ++++ F R E+ +++ M+
Sbjct: 456 GLGKVGRVDDAYK-VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
D +D + ++ + ++ + +++I + D Y+ +I GL ++G +E
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 481
Y + + G + YN+VIDG CK +AYQ+L EM+ G P VT+
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 220/465 (47%), Gaps = 8/465 (1%)
Query: 29 TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS 88
G+ D AY + + R G +P+ + Y+ ++ + + V+ A K++E MK+ D +
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA----LKVFEEMKK--DAA 374
Query: 89 VNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRV 148
N + + L+D LCR G ++ F + + M + M+D LC+S + A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 149 VYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 208
M + TP +++ S++ GL K G AY++ E+ + + Y L++
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 209 ESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVIT 268
E K+ + M+++ ++ N Y+ + P + + + + PD +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 269 LNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV 328
+ +I+G K G E ++ M + C D + +I G G++ +A LL +
Sbjct: 555 YSILIHGLIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE- 612
Query: 329 MPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQ 388
M +G+ P +VTY +V+ GL ++ R++EA +F + + Y+ +IDG + +
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 389 LDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNV 448
+DEA ++++ + Y + +++ L ++ +I+EA+ + + TPN V Y +
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 449 VIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+I+G CK+ +A+ +EM+K G+ P +++ + GN
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 3/236 (1%)
Query: 249 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 308
E +V+ M + + +P T+I F + + L + M + P FTT+
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTL 209
Query: 309 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 368
I G GR+ AL+LL + M IV YN + ++ +V+ A + F+ + G
Sbjct: 210 IRGFAKEGRVDSALSLLDE-MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 369 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 428
+ D TY +I LC++N+LDEA ++ + + Y Y MI G +GK EA
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 429 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
L G P+++ YN ++ K+ EA ++ EM+K+ P+ T+ IL
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNIL 383
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 5/198 (2%)
Query: 9 TTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 68
T GF S+ LA +D AY +F+E + + N + YS L+ G + ++
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 69 RANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFA 128
A +++ +L ++ L+ N + +L+D+L + +NE + M + K +
Sbjct: 675 EAYLILEELMQK-----GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 129 CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI 188
G +I+ LC+ + + A M+K+G+ PS +SY +++ GL K G A L +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 189 QFGYLPSEHTYKVLVEGL 206
G +P Y ++EGL
Sbjct: 790 ANGGVPDSACYNAMIEGL 807
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 287 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 346
++L +M F P T ++ G + +++E +++ Q+M + + P Y ++
Sbjct: 119 QILGEMSVAGF-GPSVNTCIEMVLGCVKANKLREGYDVV-QMMRKFKFRPAFSAYTTLIG 176
Query: 347 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 406
+ + +F M +G + +I G + ++D A D++ S
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 407 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 466
D +Y I + GK+ A F +E+ +G+ P+ V Y +I CK + EA ++
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 467 REMRKNGLNPDAVTWRILDKLHGNRG 492
+ KN P + + +G+ G
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAG 322
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 230/510 (45%), Gaps = 44/510 (8%)
Query: 9 TTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 68
+ GF +L +L G +++A+ V+ E+ GV N T +++V + + +E
Sbjct: 193 SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKME 252
Query: 69 RANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFA 128
+ + ++ +E+ + + + L+ + +G + E F + MP +
Sbjct: 253 KVGTFLSQV-----QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 129 CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI 188
+I+ LC+ G+ A V M + GL+P +Y S++ CK G + ++ +
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 189 QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPT 248
+P + ++ +L+KA + + I I ++ C +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 249 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 308
+N+ MLQ C DV+T NT+++G CK + EA K+ N+M + PD+ T T +
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE-RALFPDSYTLTIL 486
Query: 309 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 368
I G +G +Q A+ L +Q M ++ +VTYN +L G ++ ++ AKE++ M+
Sbjct: 487 IDGHCKLGNLQNAMEL-FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 369 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 428
++ +Y+I+++ LC L EA R WD+++ + + +MIKG CRSG +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 429 HFLYELVDSG-------------------------------------VTPNIVCYNVVID 451
FL +++ G + P++ YN ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 452 GACKLSMKREAYQILREMRKNGLNPDAVTW 481
G C+ + +EA +LR+M + G+NPD T+
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 211/469 (44%), Gaps = 9/469 (1%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G Y +L SA + G M+ A+++ + M G P TY+ ++ G+ + ERA
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ ++ LS ++ + +L+ C++G V E ++ DM V +
Sbjct: 325 KEVFAEMLR-----SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
M+ RSG A +++ GL P V Y ++ G C+ G A L E +Q
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
G TY ++ GLC L +A K+ M + + I + C + N
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+ + M + + + DV+T NT+++GF K+G I+ A ++ DMV+ K P ++++ ++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVN 558
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
L + G + EA ++ M + P ++ N++++G R + + M+ G V
Sbjct: 559 ALCSKGHLAEAFR-VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN--IHDNYVYAAMIKGLCRSGKIHEAV 428
D +Y +I G + +A + + D + Y +++ G CR ++ EA
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 429 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPD 477
L ++++ GV P+ Y +I+G EA++I EM + G +PD
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 214/471 (45%), Gaps = 17/471 (3%)
Query: 24 SALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKE 83
S L I +D + +CG N + +L+R ++ R + A+ L
Sbjct: 146 SRLEIVNSLDSTFS------NCG--SNDSVFDLLIRTYVQARKLREAHEAFTLL-----R 192
Query: 84 EEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNH 143
+ +V+ A L+ SL R G+V + + +++ + + M+++LC+ G+
Sbjct: 193 SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKME 252
Query: 144 GASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLV 203
+ ++++G+ P +V+YN+++ G A++L+ G+ P +TY ++
Sbjct: 253 KVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 204 EGLCGESDLEKARKVLQFML-SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQC 262
GLC E+A++V ML S D T ++ + A C + E V M
Sbjct: 313 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA-CKKGDVVETEKVFSDMRSRDV 371
Query: 263 QPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEAL 322
PD++ +++++ F + G +++AL N + PD V +T +I G G I A+
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAM 430
Query: 323 NLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDG 382
NL + M Q+G + +VTYN +L GL + + + EA ++FN M + DS T I+IDG
Sbjct: 431 NLRNE-MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 383 LCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 442
C+ L A + + D Y ++ G + G I A ++V + P
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 443 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+ Y+++++ C EA+++ EM + P + + K + GN
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 190/429 (44%), Gaps = 42/429 (9%)
Query: 8 PTTGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDV 67
P GF ++ + L G+ + A +VF EM G+ P+S TY L+ + DV
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 68 ERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEF 127
K++ M+ D+ + F++++ R G +++ + + + +
Sbjct: 357 VETE----KVFSDMR-SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 128 ACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEG 187
+I CR G A + M ++G +V+YN+I+HGLCK A +L E
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 188 IQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK-------------------DV 228
+ P +T +L++G C +L+ A ++ Q M K+ D+
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 229 DRTRIC----------------NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTV 272
D + +I + ALC + E V M+ +P V+ N++
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 273 INGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV-MPQ 331
I G+C+ G + L M++ F PD +++ T+I+G + + +A L+ ++ Q
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 391
G P + TYN++L G R +++EA+ V M+ GV D +TY +I+G + L E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 392 AKRFWDDIV 400
A R D+++
Sbjct: 711 AFRIHDEML 719
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 170/397 (42%), Gaps = 55/397 (13%)
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
MI L RSGR A + M +R L NS+ G
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS--------------- 163
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
++ + +L+ L +A + + SK CN + +L I
Sbjct: 164 ---NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
V + ++ +V TLN ++N CK G++E+ L+ V K PD VT+ T+I
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISA 279
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
+ G ++EA L+ MP +G+SPG+ TYN V+ GL + + E AKEVF ML G+
Sbjct: 280 YSSKGLMEEAFELM-NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 372 DSTTYA--------------------------IVIDGLC---------ESNQLDEAKRFW 396
DSTTY +V D +C S LD+A ++
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 397 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 456
+ + I DN +Y +I+G CR G I A++ E++ G ++V YN ++ G CK
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 457 SMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
M EA ++ EM + L PD+ T IL H GN
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 15 PFPPVAS-LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P P S L +AL G + A++V+DEM + P + + +++G R+ +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP--QGKSVNEEFACGH 131
+ K+ E + ++ L+ RE +++ F + + M QG V + F
Sbjct: 608 LEKMIS-----EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
++ CR + A V+ M +RG+ P +Y +++G A+++ +E +Q G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 192 YLPSE 196
+ P +
Sbjct: 723 FSPDD 727
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 224/457 (49%), Gaps = 44/457 (9%)
Query: 37 KVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFAN 96
K+ DEM G+ PN Y++ + + R +E A K++E MK+ L N ++
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE----KMFELMKKHGVLP-NLYTYSA 274
Query: 97 LVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYV-MRKR 155
++D C+ G V + + + +++ + + G ++D C++ R +R ++V M K
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA-RELVTARSLFVHMVKF 333
Query: 156 GLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 215
G+ P+L YN ++HG CK G + A LL E P TY +L+ GLC E + +A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 216 RKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 275
++ Q M +++ +F P T N++I+G
Sbjct: 394 NRLFQKMKNER----------------------------IF-------PSSATYNSLIHG 418
Query: 276 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 335
+CK +E+AL + ++M A P+ +TF+T+I G NV I+ A+ L ++ M +G
Sbjct: 419 YCKEYNMEQALDLCSEMTASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYFE-MTIKGIV 476
Query: 336 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 395
P +VTY A++ F+ ++EA +++ ML G+ + T+A ++DG + +L A F
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 396 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 455
+ + + ++ + +I+GLC++G I A F ++ G+TP+I Y ++ G +
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 456 LSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 492
+ + +M K G+ P+ + ++L + + G
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANG 633
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 191/433 (44%), Gaps = 49/433 (11%)
Query: 65 RDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVN 124
R E +N + +L+ +++ + + F+ L+ G E ++ +M K
Sbjct: 107 RHSEPSN-MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSP 162
Query: 125 EEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLL 184
+ AC +++ L R R +M RGL P + Y + K G + +LL
Sbjct: 163 DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL 222
Query: 185 EEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLI 244
+E G P+ + Y + + LC ++ +E+A K+ + M KK
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM--KKH----------------- 263
Query: 245 KNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 304
VL P++ T + +I+G+CK G + +A + +++ + P+ V
Sbjct: 264 -------GVL---------PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL-LPNVVV 306
Query: 305 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM 364
F T++ G + A +L M + G P + YN ++ G + + EA + + M
Sbjct: 307 FGTLVDGFCKARELVTARSLFVH-MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 365 LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDI----VWPSNIHDNYVYAAMIKGLCR 420
+ + D TY I+I+GLC +Q+ EA R + + ++PS+ Y ++I G C+
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA----TYNSLIHGYCK 421
Query: 421 SGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
+ +A+ E+ SGV PNI+ ++ +IDG C + + A + EM G+ PD VT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 481 WRILDKLHGNRGN 493
+ L H N
Sbjct: 482 YTALIDAHFKEAN 494
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 52/295 (17%)
Query: 237 YLRALCLIKN----------PTELLNVLVFMLQTQCQP--DVITLNTVINGFCKMGRIEE 284
Y A CLIK+ P+ + + L L+ P + + +I F +MG EE
Sbjct: 91 YTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEE 150
Query: 285 ALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG----------- 333
AL V +M C+PD+ +I+ GL+ R +++ + YQ+M RG
Sbjct: 151 ALWVSREMK----CSPDSKACLSILNGLVRRRRF-DSVWVDYQLMISRGLVPDVHIYFVL 205
Query: 334 ---------YS---------------PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
YS P + Y + L R ++EEA+++F M GV
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265
Query: 370 VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH 429
+ + TY+ +IDG C++ + +A + +I+ + + V+ ++ G C++ ++ A
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARS 325
Query: 430 FLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+V GV PN+ YN +I G CK EA +L EM L+PD T+ IL
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++ A ++ EM G++P+ +TY+ L+ + +++ A +L+ M E + N
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA----LRLYSDML-EAGIHPN 513
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
+ FA LVD +EG ++ ++ Q +S +I+ LC++G ASR
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPS 195
MR G+TP + SY S++ G + L + I+ G LP+
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 233/484 (48%), Gaps = 45/484 (9%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAF 94
A +VFD+M GV N T++VLV G +E A + ERM E ++ +N +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA----LGMLERMVSEFKVNPDNVTY 243
Query: 95 ANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK 154
++ ++ ++G ++++ + DM + V +++ C+ G A ++V +M++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE- 213
+ P L +YN +++GLC G +L++ P TY L++G C E L
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSL 362
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALC-------LIKNPTELLNVLVF---------- 256
+ARK+++ M + NI L+ LC + + EL+++ F
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 257 -------------------MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKF 297
M Q + + ITLNT+++ CK +++EA +LN F
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 298 CAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEA 357
D VT+ T+I G ++++AL + + M + +P + T+N+++ GL + E A
Sbjct: 483 IV-DEVTYGTLIMGFFREEKVEKALEM-WDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 358 KEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKG 417
E F+ + G++ D +T+ +I G C+ ++++A F+++ + S DNY ++ G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 418 LCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPD 477
LC+ G +A++F L++ + V YN +I CK +EAY +L EM + GL PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 478 AVTW 481
T+
Sbjct: 660 RFTY 663
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 219/480 (45%), Gaps = 17/480 (3%)
Query: 14 SPFPPVASLTSALAI---TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
SP P A AL+ G+ VA ++F +M + PN LT + L+ G++R
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS--- 182
Query: 71 NVLMFKLWERMKEEEDL-----SVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVN- 124
F + + +D+ S+N F LV+ C EG + + + E M VN
Sbjct: 183 ----FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 125 EEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLL 184
+ ++ ++ + GR ++ M+K GL P+ V+YN++V+G CK G A+Q++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 185 EEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLI 244
E Q LP TY +L+ GLC + + +++ M S K N + +
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 245 KNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 304
E ++ M + + +T N + CK + E + + ++V +PD VT
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 305 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM 364
+ T+I L VG + AL ++ + M Q+G +T N +L L + R+++EA + N
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 365 LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKI 424
G + D TY +I G ++++A WD++ + ++I GLC GK
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 425 HEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
A+ EL +SG+ P+ +N +I G CK +A++ E K+ PD T IL
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 166/363 (45%), Gaps = 20/363 (5%)
Query: 34 VAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAA 93
V KV + + G P+ +TY L++ L+ D+ A +M ++ ++ + +N
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK-----GIKMNTIT 453
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
++D+LC+E ++E + + + +E G +I R + A + M+
Sbjct: 454 LNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK 513
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
K +TP++ ++NS++ GLC HG A + +E + G LP + T+ ++ G C E +E
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
KA + + CNI L LC + LN +++ + + D +T NT+I
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMI 632
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+ FCK +++EA +L++M K PD T+ + I L+ G++ E LL + + G
Sbjct: 633 SAFCKDKKLKEAYDLLSEM-EEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
+ R +VE K + ++ Y+ VID LC +L E
Sbjct: 692 -------------SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHS 738
Query: 394 RFW 396
R +
Sbjct: 739 RSY 741
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 7/287 (2%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF +L A G++ A ++ EM G+ N++T + ++ + + R ++ A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ L+ +R V+ + L+ RE V + + ++M + K
Sbjct: 471 HNLLNSAHKR-----GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I LC G+ A + + GL P ++NSI+ G CK G +A++ E I+
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
+ P +T +L+ GLC E EKA ++ +++VD T N + A C K E
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD-TVTYNTMISAFCKDKKLKEA 644
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKF 297
++L M + +PD T N+ I+ + G++ E ++L +GKF
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF-SGKF 690
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 218/444 (49%), Gaps = 15/444 (3%)
Query: 35 AYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAF 94
A+ +F EM H LP+ + ++ L+ T ++ R +++ + + E +S + +F
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTA---TANLRRYETVIY--FSQKMELYGISHDLYSF 109
Query: 95 ANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK 154
L+ CR ++ + M + G ++ C R A +V +M K
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 214
G P++V YN+++ GLCK+G A +LL E + G TY L+ GLC
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 215 ARKVLQFMLSKKD----VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
A ++L+ M+ + V T + +++++ N E + M+Q+ P+ +T N
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQ----GNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++ING C GR+ +A K D++A K C P+ VT+ T+I G + E + L +Q M
Sbjct: 286 SIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL-FQRMS 343
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
G++ I TYN ++ G ++ ++ A ++F M+ V D T+ I++ GLC + +++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
A +DD+ Y MI GLC++ K+ +A L GV P+ Y ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 451 DGACKLSMKREAYQILREMRKNGL 474
G CK +REA +++R M++ G+
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGI 487
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 168/388 (43%), Gaps = 72/388 (18%)
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I CR R A V+ M K G PS+V++ S++HG C A+ L+ ++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
Y P+ Y L++GLC +L NI L ELL
Sbjct: 172 YEPNVVVYNTLIDGLCKNGEL----------------------NIAL----------ELL 199
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
N M + DV+T NT++ G C GR +A ++L DM+ + PD VTFT +I
Sbjct: 200 NE---MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTALIDV 255
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
+ G + EA L Y+ M Q P VTYN+++ GL R+ +AK+ F+ M G
Sbjct: 256 FVKQGNLDEAQEL-YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
+ TY +I G C+ +DE + + + D + Y +I G C+ GK+ A+
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 432 YELVDSGVTPN-----------------------------------IVCYNVVIDGACKL 456
+V VTP+ IV YN++I G CK
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 457 SMKREAYQILREMRKNGLNPDAVTWRIL 484
+A+++ + G+ PDA T+ I+
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 15/365 (4%)
Query: 32 MDVAYKVFDEMRHCGVLPNSLTYSVLVRG---VLRTRDVERANVLMFKLWERMKEEEDLS 88
+ A V +M G P+ +T+ L+ G V R D +LM K
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK--------SGYE 173
Query: 89 VNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRV 148
N + L+D LC+ G +N + +M + + ++ LC SGR A+R+
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 149 VYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 208
+ M KR + P +V++ +++ K G A +L +E IQ P+ TY ++ GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 209 ESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVIT 268
L A+K M SK N + C + E + + M D+ T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 269 LNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV 328
NT+I+G+C++G++ AL + MV+ + PD +T ++ GL G I+ AL + +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRV-TPDIITHCILLHGLCVNGEIESAL-VKFDD 411
Query: 329 MPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGI-GVVADSTTYAIVIDGLCESN 387
M + GIV YN ++ GL + +VE+A E+F C L + GV D+ TY I+I GLC++
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELF-CRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 388 QLDEA 392
EA
Sbjct: 471 PRREA 475
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 4/255 (1%)
Query: 235 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 294
I + C + L+VL M++ +P ++T ++++GFC + RI +A ++ MV
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 295 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 354
+ P+ V + T+I GL G + AL LL + M ++G +VTYN +L GL R
Sbjct: 170 SGY-EPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 355 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 414
+A + M+ + D T+ +ID + LDEA+ + +++ S +N Y ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 415 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 474
I GLC G++++A + G PN+V YN +I G CK M E ++ + M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 475 NPDAVTWRILDKLHG 489
N D T+ L +HG
Sbjct: 348 NADIFTYNTL--IHG 360
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 152/321 (47%), Gaps = 23/321 (7%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L L GE+++A ++ +EM G+ + +TY+ L+ G+ + A ++ + +R
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
++ + F L+D ++G ++E + ++M Q +I+ LC G
Sbjct: 241 -----SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF-------GYL 193
R + A + +M +G P++V+YN+++ G CK +++++EG++ G+
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK-------FRMVDEGMKLFQRMSCEGFN 348
Query: 194 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 253
TY L+ G C L A + +M+S++ I L LC+ L
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 254 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM-VAGKFCAPDAVTFTTIIFGL 312
M +++ ++ N +I+G CK ++E+A ++ + V G PDA T+T +I GL
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG--VKPDARTYTIMILGL 466
Query: 313 LNVGRIQEALNLLYQVMPQRG 333
G +EA L+ + M + G
Sbjct: 467 CKNGPRREADELIRR-MKEEG 486
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
GF R E+A + +MV + P V FT ++ N+ R E + Q M G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQ-PLPSIVDFTRLLTATANLRR-YETVIYFSQKMELYG 101
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
S + ++ ++ R R+ A V M+ +G T+ ++ G C N++ +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
+V + VY +I GLC++G+++ A+ L E+ G+ ++V YN ++ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
C +A ++LR+M K +NPD VT+ L + +GN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 17 PPVASLTSALAI---TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P V + T+ + + G +D A +++ EM V PN++TY+ ++ G+ +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL----------CM 293
Query: 74 MFKLWERMKEEEDLSVNNAAFAN------LVDSLCREGYVNEVFRIAEDMPQGKSVNEEF 127
+L++ K+ DL + F N L+ C+ V+E ++ + M + F
Sbjct: 294 HGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 128 ACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEG 187
+I C+ G+ A + M R +TP ++++ ++HGLC +G A ++
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 188 IQFGYLPSEHTYKVLVEGLCGESDLEKA 215
+ Y +++ GLC +EKA
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKA 440
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 229/479 (47%), Gaps = 13/479 (2%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF +++ + LA G++D A ++FDEM GV P+ Y++L+ G L+ +D + A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+LW+R+ E+ + N ++ L + G V++ +I E M Q + + +
Sbjct: 239 ----MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGG---CMRAYQLLEEG 187
+I LC +G A V + +R + +V+YN+++ G C+ G + ++++E
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 188 IQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNP 247
+ +Y +L++GL +++A + + M +K I++ LC+
Sbjct: 355 NSVNIV----SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 248 TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTT 307
+ L V+ + + DV ++I+ CK R+EEA ++ +M + ++
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNSHVCNA 469
Query: 308 IIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGI 367
+I GL+ R+ EA L + M + G P +V+YN ++ GL + + EA ML
Sbjct: 470 LIGGLIRDSRLGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 368 GVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 427
G D TY+I++ GLC ++D A W + D ++ +I GLC GK+ +A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 428 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
+ + + T N+V YN +++G K+ A I M K GL PD +++ + K
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 4/354 (1%)
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I C+ A + M K G P + SY+++++ L K G A +L +E + G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV-DRTRICNIYLRALCLIKNPTEL 250
P Y +L++G E D + A ++ +L V + NI + L +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
L + M Q + + D+ T +++I+G C G +++A V N++ K + D VT+ T++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK-ASIDVVTYNTMLG 333
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G G+I+E+L L +++M + S IV+YN +++GL +++EA ++ M G
Sbjct: 334 GFCRCGKIKESLEL-WRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
AD TTY I I GLC + +++A ++ D Y YA++I LC+ ++ EA +
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ E+ GV N N +I G + S EA LREM KNG P V++ IL
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 217/475 (45%), Gaps = 53/475 (11%)
Query: 17 PPVASLTSALAITGEMDVAYKV---FDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P + S + L E KV F GV PN TY+VL++ + ++ E+A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMI 133
+ +W +EG+ +VF + +I
Sbjct: 172 LDWMW------------------------KEGFKPDVFSYST----------------VI 191
Query: 134 DSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCK---HGGCMRAY-QLLEEGIQ 189
+ L ++G+ A + M +RG+ P + YN ++ G K H M + +LLE+
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 249
+ P+ T+ +++ GL ++ K+ + M + + + LC N +
Sbjct: 252 Y---PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 250 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 309
+V + + + DV+T NT++ GFC+ G+I+E+L++ M + + V++ +I
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN--SVNIVSYNILI 366
Query: 310 FGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
GLL G+I EA +++++MP +GY+ TY + GL V +A V + G
Sbjct: 367 KGLLENGKIDEA-TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 370 VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH 429
D YA +ID LC+ +L+EA ++ +++V A+I GL R ++ EA
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 430 FLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
FL E+ +G P +V YN++I G CK EA ++EM +NG PD T+ IL
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 197/444 (44%), Gaps = 44/444 (9%)
Query: 47 VLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGY 106
V P SL+ + VL+ E+ F L++ + + + +++ L
Sbjct: 3 VFPKSLS----PKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRM 58
Query: 107 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK-RGLTPSLVSYN 165
VN V RI E + + +E +I + ++ A V MR+ G P++ SYN
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 166 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 225
++++ + ++ L G P+ TY VL++ C + + EKAR L +M
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW-- 176
Query: 226 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 285
+ +PDV + +TVIN K G++++A
Sbjct: 177 ---------------------------------KEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 286 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 345
L++ ++M + + APD + +I G L + A+ L +++ P + T+N ++
Sbjct: 204 LELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 346 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNI 405
GL + RV++ +++ M D TY+ +I GLC++ +D+A+ ++++
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 406 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI 465
D Y M+ G CR GKI E++ L+ +++ + NIV YN++I G + EA I
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 466 LREMRKNGLNPDAVTWRILDKLHG 489
R M G D T+ I +HG
Sbjct: 382 WRLMPAKGYAADKTTYGIF--IHG 403
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 17 PPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P V S L L G+ A EM G P+ TYS+L+ G+ R R ++ L
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID----L 552
Query: 74 MFKLWERMKE---EEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+LW + + E D+ ++N L+ LC G +++ + +M
Sbjct: 553 ALELWHQFLQSGLETDVMMHNI----LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+++ + G ++ A+ + M K GL P ++SYN+I+ GLC G A + ++
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 191 GYLPSEHTYKVLVEGL 206
G P+ +T+ +LV +
Sbjct: 669 GIFPTVYTWNILVRAV 684
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 41 EMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDS 100
EM G P ++Y++L+ G+ + A+ + ++ E + DL ++ L+
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKT----YSILLCG 543
Query: 101 LCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPS 160
LCR+ ++ + Q + +I LC G+ A V+ M R T +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 161 LVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLC 207
LV+YN+++ G K G RA + + G P +Y +++GLC
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 193/393 (49%), Gaps = 37/393 (9%)
Query: 92 AAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYV 151
A F+ L+ ++ + + V + E M + C +++ CR + A +
Sbjct: 82 ADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 152 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD 211
M K G PS+V++ S+++G C+ A + ++ + GY P+ Y +++GLC
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC---- 197
Query: 212 LEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 271
K VD N +LLN M + PDV+T N+
Sbjct: 198 ------------KSKQVD----------------NALDLLNR---MEKDGIGPDVVTYNS 226
Query: 272 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 331
+I+G C GR +A ++++ M + PD TF +I + GR+ EA Y+ M +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEF-YEEMIR 284
Query: 332 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 391
R P IVTY+ ++ GL R++EA+E+F M+ G D TY+I+I+G C+S +++
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 392 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 451
+ + ++ + + Y +I+G CR+GK++ A +V GV PNI+ YNV++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 452 GACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
G C +A IL +M+KNG++ D VT+ I+
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 215/447 (48%), Gaps = 7/447 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
++D + +F M C LP+ +S L+ + + +++ +V+++ LWE+M + + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK---MKKYDVVIY-LWEQM-QMLGIPHN 115
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
L++ CR ++ M + G +++ CR R + A +
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M G P++V YN+I+ GLCK A LL + G P TY L+ GLC
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
A +++ M ++ N + A +E M++ PD++T +
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
+I G C R++EA ++ MV+ K C PD VT++ +I G +++ + L + M
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVS-KGCFPDVVTYSILINGYCKSKKVEHGMKLFCE-MS 353
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
QRG VTY +++G R ++ A+E+F M+ GV + TY +++ GLC++ +++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+A D+ D Y +I+G+C++G++ +A L G+ P+I Y ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 451 DGACKLSMKREAYQILREMRKNGLNPD 477
G K ++REA + R+M+++G+ P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 205/435 (47%), Gaps = 11/435 (2%)
Query: 15 PFPPVASLTSALAITGEM---DVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P +A + L+ +M DV ++++M+ G+ N T ++L+ R + A
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
+ K+ + E ++ F +L++ CR V + + + M
Sbjct: 137 SFLGKMIKLGHEPSIVT-----FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+ID LC+S + A ++ M K G+ P +V+YNS++ GLC G A +++ +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
P T+ L++ E + +A + + M+ + ++ + LC+ E
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
+ FM+ C PDV+T + +ING+CK ++E +K+ +M + + + VT+T +I G
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQG 370
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
G++ A + ++ M G P I+TYN +L GL ++E+A + M G+ A
Sbjct: 371 YCRAGKLNVAEEI-FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
D TY I+I G+C++ ++ +A + + + D + Y M+ GL + G EA
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 432 YELVDSGVTPNIVCY 446
++ + G+ PN CY
Sbjct: 490 RKMKEDGILPN-ECY 503
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++ ++L+L + ++ R P I ++ +L + ++++ + ++ M +G+ + T
Sbjct: 61 KLDDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
I+++ C +QL A F ++ + + +++ G CR ++++A++ ++V
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
G PN+V YN +IDG CK A +L M K+G+ PD VT+ L
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R YS G Y +LR R +++++ ++F M+ + ++ ++ + + + D
Sbjct: 40 RRAYSNG-SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
W+ + H+ ++ CR ++ A+ FL +++ G P+IV + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWR-ILDKLHGNRGNDFGL 497
+G C+ +A + +M G P+ V + I+D L ++ D L
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 226/482 (46%), Gaps = 11/482 (2%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ ++SL + + + A + D+M G P++ T++ L+ G+ A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + DL + +V+ LC+ G ++ + M +
Sbjct: 208 VALVDQMVQR-GCQPDL----VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC+ A + M +G+ P++V+YNS+++ LC +G A +LL ++
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ E L +A K+ + M+ + T N+ + C+ E
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+ FM+ C P++ T NT+INGFCK R+E+ +++ +M + + + VT+TTII
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQ 441
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G G A + Q++ R I+TY+ +L GL +++ A +F + +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ Y +I+G+C++ ++ EA WD S D Y MI GLC + EA
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL-DKLHG 489
++ + G PN YN +I + + + ++++EMR +G DA T ++ + LH
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Query: 490 NR 491
R
Sbjct: 618 GR 619
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 189/396 (47%), Gaps = 4/396 (1%)
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
F L+ ++ + V + E M ++ + I+ CR + A V+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
K G P +V+ +S+++G C A L+++ ++ GY P T+ L+ GL +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
+A ++ M+ + + LC + LN+L M + + +V+ NT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+ CK +E A+ + +M K P+ VT+ ++I L N GR +A LL M ++
Sbjct: 266 DSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN-MLEKK 323
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
+P +VT+NA++ F+ ++ EA+++ M+ + D+ TY ++I+G C N+LDEAK
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 394 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 453
+ + +V + + Y +I G C+ ++ + V E+ G+ N V Y +I G
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 454 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
+ A + ++M N + D +T+ IL LHG
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL--LHG 477
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 37/358 (10%)
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
PS+V +N ++ + K L E+ G +TY + + C S L A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 219 LQFML--------------------SKKDVDRTRICN---------------IYLRALCL 243
L M+ SK+ D + + + L L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 244 IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 303
+E + ++ M+Q CQPD++T TV+NG CK G I+ AL +LN M A + A + V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA-NVV 259
Query: 304 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 363
F TII L ++ A++L + M +G P +VTYN+++ L R +A + +
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTE-METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 364 MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423
ML + + T+ +ID + +L EA++ ++++ S D Y +I G C +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 424 IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 481
+ EA +V PNI YN +I+G CK + ++ REM + GL + VT+
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 257 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
M++++ P ++ N +++ KM + E + L + + + D T++ I
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
++ AL +L ++M + GY P IVT +++L G +R+ +A + + M+ +G D+ T+
Sbjct: 133 QLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 436
+I GL N+ EA D +V D Y ++ GLC+ G I A++ L ++
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 437 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+ + N+V +N +ID CK A + EM G+ P+ VT+ L
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 218/454 (48%), Gaps = 7/454 (1%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
E+D A +F M P+ + +S L+ + + + L+ E+M E +S N
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVISFGEKM-EILGISHN 112
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
+ L++ CR ++ + M + + +++ C R A +V
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M + G P V++ +++HGL H A L++ +Q G P TY +V GLC
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
D + A +L M + K I + + +LC ++ + LN+ M +P+VIT +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++I+ C GR +A ++L+DM+ K P+ VTF+ +I + G++ +A LY+ M
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKI-NPNLVTFSALIDAFVKKGKLVKA-EKLYEEMI 350
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+R P I TY++++ G L R+ EAK++ M+ + + TY +I+G C++ ++D
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+ + ++ + + Y +I G ++ A ++V GV PNI+ YN+++
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
DG CK +A + ++++ + PD T+ I+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 196/413 (47%), Gaps = 42/413 (10%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
G+ + SL + + A + D+M G P+++T++ L+ G+ A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L+ ++ +R + DL + +V+ LC+ G + + M K
Sbjct: 203 VALIDRMVQR-GCQPDL----VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+IDSLC+ A + M +G+ P++++Y+S++ LC +G A +LL + I+
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
P+ T+ L++ + L KA K+ + M+ K+ +D
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI-KRSID--------------------- 355
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
P++ T +++INGFC + R+ EA ++L M+ K C P+ VT+ T+I
Sbjct: 356 -------------PNIFTYSSLINGFCMLDRLGEAKQMLELMIR-KDCLPNVVTYNTLIN 401
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G R+ + + L ++ M QRG VTY ++ G F+ R + A+ VF M+ +GV
Sbjct: 402 GFCKAKRVDKGMEL-FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423
+ TY I++DGLC++ +L +A ++ + + D Y Y MI+G+C++GK
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 216/445 (48%), Gaps = 45/445 (10%)
Query: 34 VAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAA 93
+A +M G P+ +T++ L+ G +E A ++ ++ E M + D+
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDV----VM 179
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
+ ++DSLC+ G+VN + + M + +++ LC SGR A ++ M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
KR + P ++++N+++ K G + A +L E I+ P+ TY L+ G C E ++
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
+AR++ M +K C PDV+ ++I
Sbjct: 300 EARQMFYLMETKG-----------------------------------CFPDVVAYTSLI 324
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
NGFCK ++++A+K+ +M + K + +T+TT+I G VG+ A + + M RG
Sbjct: 325 NGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQVGKPNVAQEV-FSHMVSRG 382
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG---IGVVADSTTYAIVIDGLCESNQLD 390
P I TYN +L L +V++A +F M GV + TY +++ GLC + +L+
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+A ++D+ Y +I+G+C++GK+ AV+ L GV PN+V Y +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 451 DGACKLSMKREAYQILREMRKNGLN 475
G + +K EA+ + R+M+++G++
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 186/388 (47%), Gaps = 11/388 (2%)
Query: 94 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 153
F L++ + + + V + + + ++ + C +++ C+S + + AS + M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 154 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 213
K G P +V++ S+++G C A ++ + ++ G P Y +++ LC +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 214 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 273
A + M + + + LC + ++L M + + +PDVIT N +I
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 274 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 333
+ F K G+ +A ++ N+M+ AP+ T+T++I G G + EA + Y +M +G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSI-APNIFTYTSLINGFCMEGCVDEARQMFY-LMETKG 312
Query: 334 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 393
P +V Y +++ G + ++V++A ++F M G+ ++ TY +I G + + + A+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 394 RFWDDIVW---PSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD---SGVTPNIVCYN 447
+ +V P NI Y ++ LC +GK+ +A+ ++ GV PNI YN
Sbjct: 373 EVFSHMVSRGVPPNIR---TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 448 VVIDGACKLSMKREAYQILREMRKNGLN 475
V++ G C +A + +MRK ++
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMD 457
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 2/259 (0%)
Query: 234 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 293
CN+ + C P + L M++ +PD++T ++INGFC R+EEA+ ++N MV
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 294 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 353
PD V +TTII L G + AL+L Q M G P +V Y +++ GL R
Sbjct: 170 EMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 354 VEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAA 413
+A + M + D T+ +ID + + +A+ +++++ S + + Y +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 414 MIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 473
+I G C G + EA Y + G P++V Y +I+G CK +A +I EM + G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 474 LNPDAVTWRILDKLHGNRG 492
L + +T+ L + G G
Sbjct: 348 LTGNTITYTTLIQGFGQVG 366
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 170/353 (48%), Gaps = 10/353 (2%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
++ +L G ++ A +FD+M + G+ P+ + Y+ LV G+ + A+ L+ + +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
R K + D+ NA L+D+ +EG + + +M + F +I+ C
Sbjct: 241 R-KIKPDVITFNA----LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
G A ++ Y+M +G P +V+Y S+++G CK A ++ E Q G + TY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
L++G A++V M+S+ R N+ L LC + L + M +
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 260 TQ---CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 316
+ P++ T N +++G C G++E+AL V DM + +T+T II G+ G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM-DIGIITYTIIIQGMCKAG 474
Query: 317 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
+++ A+N L+ +P +G P +VTY ++ GLFR EA +F M GV
Sbjct: 475 KVKNAVN-LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 281 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL--YQVMPQRGYSPGI 338
+ EAL + MV + P + FT ++ + + + +NL Q+M G S +
Sbjct: 52 QFNEALDLFTHMVESR-PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM---GVSHDL 107
Query: 339 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 398
T N ++ + + A M+ +G D T+ +I+G C N+++EA +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 399 IVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSM 458
+V D +Y +I LC++G ++ A+ ++ + G+ P++V Y +++G C
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 459 KREAYQILREMRKNGLNPDAVTWRIL 484
R+A +LR M K + PD +T+ L
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNAL 253
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 16 FPPVASLTS---ALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 72
FP V + TS ++D A K+F EM G+ N++TY+ L++G + A
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 73 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ----GKSVNEEFA 128
+ + R + N + L+ LC G V + I EDM + G + N +
Sbjct: 374 VFSHMVSR-----GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN-IWT 427
Query: 129 CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI 188
++ LC +G+ A V MRKR + +++Y I+ G+CK G A L
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 189 QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 222
G P+ TY ++ GL E +A + + M
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 341 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 400
Y +LR + EA ++F M+ + + +++ + + + D D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 401 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 460
HD Y ++ C+S + + A FL +++ G P+IV + +I+G C +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 461 EAYQILREMRKNGLNPDAVTW-RILDKLHGNRGNDFGLRI 499
EA ++ +M + G+ PD V + I+D L N ++ L +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 219/441 (49%), Gaps = 10/441 (2%)
Query: 35 AYKVFDEM-RHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAA 93
A KVFD M + PNS++YS+L+ G+ +E A F L ++M E+ +
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEA----FGLKDQMGEK-GCQPSTRT 303
Query: 94 FANLVDSLCREGYVNEVFRIAEDM-PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVM 152
+ L+ +LC G +++ F + ++M P+G N +ID LCR G+ A+ V M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-TYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 153 RKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDL 212
K + PS+++YN++++G CK G + A++LL + P+ T+ L+EGLC
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 213 EKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTV 272
KA +L+ ML N+ + LC + +L M +PD +T +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 273 INGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQR 332
IN FCK G+ + A L M+ K + D VT TT+I G+ VG+ ++AL +L ++ R
Sbjct: 483 INAFCKQGKADVASAFLGLMLR-KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 333 GYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA 392
+ + N +L L + +V+E + + +G+V TY ++DGL S + +
Sbjct: 542 ILTTP-HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 393 KRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDG 452
R + + + + Y Y +I GLC+ G++ EA L + DSGV+PN V Y V++ G
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 453 ACKLSMKREAYQILREMRKNG 473
A + +R M + G
Sbjct: 661 YVNNGKLDRALETVRAMVERG 681
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 221/483 (45%), Gaps = 6/483 (1%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF ++ +AL G + A ++ G + +S + L+ G R ++ A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
K+++ M +E + N+ +++ L+ LC G + E F + + M +
Sbjct: 250 ----LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I +LC G A + M RG P++ +Y ++ GLC+ G A + + ++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
PS TY L+ G C + + A ++L M + R N + LC + P +
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
+++L ML PD+++ N +I+G C+ G + A K+L+ M PD +TFT II
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI-EPDCLTFTAIIN 484
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
G+ A L +M ++G S VT ++ G+ ++ + +A + ++ + ++
Sbjct: 485 AFCKQGKADVASAFL-GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 371 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 430
+ +++D L + ++ E I + Y ++ GL RSG I +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 431 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 490
L + SG PN+ Y ++I+G C+ EA ++L M+ +G++P+ VT+ ++ K + N
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 491 RGN 493
G
Sbjct: 664 NGK 666
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 212/481 (44%), Gaps = 55/481 (11%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF +P +SL +LA +AY + M G + + Y +V + + E A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ M K+ + +++ +L+ CR + + ++ + M ++E C
Sbjct: 215 EMFMSKILKI-----GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM------SKEVTCA 263
Query: 131 H-------MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQL 183
+I LC GR A + M ++G PS +Y ++ LC G +A+ L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 184 LEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL 243
+E I G P+ HTY VL++GLC + +E+A V + M+ +
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR----------------- 366
Query: 244 IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 303
+F P VIT N +ING+CK GR+ A ++L M + C P+
Sbjct: 367 -----------IF-------PSVITYNALINGYCKDGRVVPAFELLTVM-EKRACKPNVR 407
Query: 304 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 363
TF ++ GL VG+ +A++LL + M G SP IV+YN ++ GL R + A ++ +
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKR-MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 364 MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423
M + D T+ +I+ C+ + D A F ++ D +I G+C+ GK
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 424 IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 483
+A+ L LV + NV++D K +E +L ++ K GL P VT+
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 484 L 484
L
Sbjct: 587 L 587
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 178/437 (40%), Gaps = 64/437 (14%)
Query: 17 PPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P + S L L G M+ AYK+ M + P+ LT++ ++ + + A+
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM---------------- 117
+ + + +S++ L+D +C+ G + I E +
Sbjct: 499 LGLMLRK-----GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 118 ---PQGKSVNEEFAC----------------GHMIDSLCRSGRNHGASRVVYVMRKRGLT 158
+G V EE A ++D L RSG G+ R++ +M+ G
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 159 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 218
P++ Y I++GLC+ G A +LL G P+ TY V+V+G L++A +
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 219 LQFMLSKKDVDRTRICNIYLRALCL----IKNPTELLNVLVFMLQT--QCQPDVITLNTV 272
++ M+ + RI + L+ L I N E + + +T +C ++I++
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733
Query: 273 ING------------FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
+ G CK GR +E+ ++ +++ A+ I+ + + +
Sbjct: 734 LGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDI--IMESYCSKKKHTK 791
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
+ L+ V+ + G+ P ++ V++GL + E A+E+ +L V + + +
Sbjct: 792 CMELITLVL-KSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYV 850
Query: 381 DGLCESNQLDEAKRFWD 397
+ L E ++ + D
Sbjct: 851 ECLMEGDETGDCSEVID 867
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 175/361 (48%), Gaps = 3/361 (0%)
Query: 135 SLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLP 194
SLC++G + A ++ M+ G++P+ +V + G A LL + F
Sbjct: 112 SLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--SFEVEG 169
Query: 195 SEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVL 254
L+ L +E A K+ L + + T+ NI +R LC + + L +L
Sbjct: 170 CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELL 229
Query: 255 VFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLN 314
M C+PD++T NT+I GFCK + +A ++ D+ +G C+PD VT+T++I G
Sbjct: 230 GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK 289
Query: 315 VGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADST 374
G+++EA +LL M + G P VT+N ++ G + + A+E+ M+ G D
Sbjct: 290 AGKMREASSLLDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 375 TYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYEL 434
T+ +IDG C Q+ + R W+++ + + Y+ +I LC ++ +A L +L
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 435 VDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGND 494
+ P YN VIDG CK EA I+ EM K PD +T+ IL H +G
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 495 F 495
F
Sbjct: 469 F 469
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 51/445 (11%)
Query: 75 FKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ-GKSVNEEFACGHMI 133
F+ WE + + ++ + + L SLC+ G + ++ E M G S N G ++
Sbjct: 87 FRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLL-GFLV 145
Query: 134 DSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL 193
S G+ H A+ ++ ++ + + NS+++ L K A +L +E ++F
Sbjct: 146 SSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 194 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 253
T+ +L+ GLCG EKA ++L M N ++ C + LN
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC----KSNELNK 259
Query: 254 LVFMLQ-----TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV--------------- 293
M + + C PDV+T ++I+G+CK G++ EA +L+DM+
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 294 -----AGKF--------------CAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGY 334
AG+ C PD VTFT++I G VG++ + L ++ M RG
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL-WEEMNARGM 378
Query: 335 SPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKR 394
P TY+ ++ L R+ +A+E+ + ++ Y VIDG C++ +++EA
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 395 FWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGAC 454
+++ D + +I G C G++ EAV +++V G +P+ + + ++
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Query: 455 KLSMKREAY---QILREMRKNGLNP 476
K M +EAY QI R+ + N + P
Sbjct: 499 KAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 197/426 (46%), Gaps = 15/426 (3%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
LT +L G D+A ++F+ M+ GV PN+ LV + A L+ + +E
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEV- 167
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
E + VN +L+++L + V + ++ ++ + +S N+ +I LC G+
Sbjct: 168 -EGCCMVVN-----SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL--PSEHTY 199
A ++ VM G P +V+YN+++ G CK +A ++ ++ ++ G + P TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTY 280
Query: 200 KVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
++ G C + +A +L ML N+ + + M+
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA-GKFCAPDAVTFTTIIFGLLNVGRI 318
C PDV+T ++I+G+C++G++ + ++ +M A G F P+A T++ +I L N R+
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF--PNAFTYSILINALCNENRL 398
Query: 319 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 378
+A LL Q + + P YN V+ G + +V EA + M D T+ I
Sbjct: 399 LKARELLGQ-LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 379 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 438
+I G C ++ EA + +V D ++++ L ++G EA H L ++ G
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKG 516
Query: 439 VTPNIV 444
+ N+V
Sbjct: 517 QSNNVV 522
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 161/329 (48%), Gaps = 12/329 (3%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L L G+ + A ++ M G P+ +TY+ L++G ++ ++ +A+ ++++ +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS----EMFKDV 267
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
K S + + +++ C+ G + E + +DM + ++D ++G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
A + M G P +V++ S++ G C+ G + ++L EE G P+ TY +
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
L+ LC E+ L KAR++L + SK + + + N + C E ++ M + +
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEA 321
C+PD IT +I G C GR+ EA+ + + MVA C+PD +T ++++ LL G +EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG-CSPDKITVSSLLSCLLKAGMAKEA 506
Query: 322 LNLLYQVMPQRGYSPGIV-----TYNAVL 345
+L + ++G S +V T NA L
Sbjct: 507 YHL--NQIARKGQSNNVVPLETKTANATL 533
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 164/343 (47%), Gaps = 14/343 (4%)
Query: 19 VASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 78
V SL + L ++ A K+FDE ++ T+++L+RG+ E+A + + +
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA-LELLGVM 232
Query: 79 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC-GHMIDSLC 137
E D+ N L+ C+ +N+ + +D+ G + + MI C
Sbjct: 233 SGFGCEPDIVTYNT----LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 138 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEH 197
++G+ AS ++ M + G+ P+ V++N +V G K G + A ++ + I FG P
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 198 TYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFM 257
T+ L++G C + + ++ + M ++ +I + ALC N LL +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC---NENRLLKARELL 405
Query: 258 LQTQCQ---PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLN 314
Q + P N VI+GFCK G++ EA ++ +M K C PD +TFT +I G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK-CKPDKITFTILIIGHCM 464
Query: 315 VGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEA 357
GR+ EA+++ ++ M G SP +T +++L L + +EA
Sbjct: 465 KGRMFEAVSIFHK-MVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 13 YSPFPPVASLTSAL---AITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVER 69
+ FP V + TS + G++ +++++EM G+ PN+ TYS+L+ + + +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 70 ANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC 129
A L+ +L + D+ + ++D C+ G VNE I E+M + K ++
Sbjct: 401 ARELLGQLASK-----DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQL 183
+I C GR A + + M G +P ++ +S++ L K G AY L
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 226/480 (47%), Gaps = 13/480 (2%)
Query: 14 SPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
S F V S L G++ A + M G P+ ++Y+ L+ G R D+ A+++
Sbjct: 57 SSFNSVVSFVCKL---GQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMI 133
+ L R + +F +L + + ++EVF M + S N I
Sbjct: 114 LESL--RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV-VTYSTWI 170
Query: 134 DSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL 193
D+ C+SG A + + M++ L+P++V++ ++ G CK G A L +E +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 194 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 253
+ TY L++G C + ++++A ++ M+ + + + + + +
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 254 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 313
L ML + D+ +I+G C G+++EA +++ DM PD V FTT++
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL-VPDMVIFTTMMNAYF 349
Query: 314 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADS 373
GR++ A+N+ Y + +RG+ P +V + ++ G+ + ++ EA V+ C+ A+
Sbjct: 350 KSGRMKAAVNM-YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEK----AND 403
Query: 374 TTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE 433
Y ++ID LC+ E +R + I + D ++Y + I GLC+ G + +A
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 434 LVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+V G+ +++ Y +I G + EA Q+ EM +G++PD+ + +L + + GN
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 35/378 (9%)
Query: 107 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 166
V E + + + ++ + F C I L S + + + + RG TP S+NS
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 167 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 226
+V +CK G A ++ +FG P +Y L++G C D+ A VL+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL---- 117
Query: 227 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 286
R + ++ C+PD+++ N++ NGF KM ++E
Sbjct: 118 -----RASHGFI-----------------------CKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 287 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 346
+ M+ K C+P+ VT++T I G +Q AL + M + SP +VT+ ++
Sbjct: 150 VYMGVML--KCCSPNVVTYSTWIDTFCKSGELQLALKSFHS-MKRDALSPNVVTFTCLID 206
Query: 347 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 406
G + +E A ++ M + + + TY +IDG C+ ++ A+ + +V
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 407 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 466
++ VY +I G + G A+ FL ++++ G+ +I Y V+I G C +EA +I+
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 467 REMRKNGLNPDAVTWRIL 484
+M K+ L PD V + +
Sbjct: 327 EDMEKSDLVPDMVIFTTM 344
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
++ +A +G M A ++ ++ G P+ + S ++ G+ + + A +++ E
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIE 399
Query: 80 RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139
+ N+ + L+D+LC+EG EV R+ + + V ++F I LC+
Sbjct: 400 K--------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTY 199
G A ++ M + GL L++Y ++++GL G + A Q+ +E + G P +
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 200 KVLVEGLCGESDLEKARKVL 219
+L+ E ++ A +L
Sbjct: 512 DLLIRAYEKEGNMAAASDLL 531
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%)
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
EA +F + SN+ D + I L S ++ FL LV G TP+ +N V+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
CKL + A I+ M + G PD +++ L H G+
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 227/458 (49%), Gaps = 23/458 (5%)
Query: 45 CGVLPNS--------LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFAN 96
C +L NS L + +L+ R R V+ + ++ K+ ++++L+V+ ++ +
Sbjct: 152 CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKM-----KDQNLNVSTQSYNS 206
Query: 97 LVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 156
++ + +V++ +D E ++D LCR + A + +
Sbjct: 207 VLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKD 259
Query: 157 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 216
+ PS+VS+NSI+ G CK G A ++ G +PS +++ +L+ GLC + +A
Sbjct: 260 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 319
Query: 217 KVLQFMLSKKDVDRTRIC-NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 275
++ M +K V+ + NI + L+ + V+ ML PDVIT ++ G
Sbjct: 320 ELASDM-NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 378
Query: 276 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 335
C++G I+ L +L DM++ F + + ++ GL GRI EAL+L Q M G S
Sbjct: 379 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ-MKADGLS 437
Query: 336 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 395
P +V Y+ V+ GL +L + + A +++ M ++ +S T+ ++ GLC+ L EA+
Sbjct: 438 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 497
Query: 396 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 455
D ++ D +Y +I G +SG I EA+ ++++G+TP++ +N +I G CK
Sbjct: 498 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 557
Query: 456 LSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
EA +IL ++ GL P V++ L + N GN
Sbjct: 558 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 595
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 221/487 (45%), Gaps = 46/487 (9%)
Query: 17 PPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P V S L + L + G + A ++ +M GV P+S+TY++L +G + A
Sbjct: 297 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA--- 353
Query: 74 MFKLWERMKEEED--LSVNNAAFANLVDSLCREGYVNEVFRIAEDM-PQGKSVNEEFACG 130
WE +++ D LS + + L+ C+ G ++ + +DM +G +N C
Sbjct: 354 ----WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
M+ LC++GR A + M+ GL+P LV+Y+ ++HGLCK G A L +E
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI----YLRALCLIKN 246
LP+ T+ L+ GLC + L +AR +L ++S + + NI Y ++ C I+
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC-IEE 528
Query: 247 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFT 306
EL V++ +T P V T N++I G+CK I EA K+L D++ AP V++T
Sbjct: 529 ALELFKVVI---ETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGLAPSVVSYT 584
Query: 307 TIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG 366
T++ N G + +++ L + M G P VTY+ + +GL R + E V
Sbjct: 585 TLMDAYANCGNTK-SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----- 638
Query: 367 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 426
++ K+ D+ D Y +I+ LCR +
Sbjct: 639 ------------------RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 680
Query: 427 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
A FL + + + YN++ID C R+A + +++ ++ + L K
Sbjct: 681 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 740
Query: 487 LHGNRGN 493
H +G+
Sbjct: 741 AHCVKGD 747
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 196/415 (47%), Gaps = 11/415 (2%)
Query: 76 KLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV---FRIAEDMPQGKSVNEEFACGHM 132
K+W+ KE +D N ++ +VD LCR+ + + R +E G SV + +
Sbjct: 216 KMWDVYKEIKD--KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV---VSFNSI 270
Query: 133 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 192
+ C+ G A + K GL PS+ S+N +++GLC G A +L + + G
Sbjct: 271 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 330
Query: 193 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 252
P TY +L +G + A +V++ ML K I L C + N L
Sbjct: 331 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 390
Query: 253 VLVFMLQTQCQPD-VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
+L ML + + +I + +++G CK GRI+EAL + N M A +PD V ++ +I G
Sbjct: 391 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHG 449
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
L +G+ AL LY M + P T+ A+L GL + + EA+ + + ++ G
Sbjct: 450 LCKLGKFDMAL-WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 508
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
D Y IVIDG +S ++EA + ++ + ++I G C++ I EA L
Sbjct: 509 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
+ G+ P++V Y ++D + ++ REM+ G+ P VT+ ++ K
Sbjct: 569 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 205/471 (43%), Gaps = 63/471 (13%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L + G + A++V +M G+ P+ +TY++L+ G + +++ VL+ + R
Sbjct: 340 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 399
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
E + + ++ LC+ G ++E +
Sbjct: 400 FELNSI----IPCSVMLSGLCKTGRIDEALSLFNQ------------------------- 430
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
M+ GL+P LV+Y+ ++HGLCK G A L +E LP+ T+
Sbjct: 431 ----------MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 480
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI----YLRALCLIKNPTELLNVLVFM 257
L+ GLC + L +AR +L ++S + + NI Y ++ C I+ EL V++
Sbjct: 481 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVI-- 537
Query: 258 LQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGR 317
+T P V T N++I G+CK I EA K+L D++ AP V++TT++ N G
Sbjct: 538 -ETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGN 595
Query: 318 IQEALNLLYQVMPQRGYSPGIVTYNAVLRGL------------FRLRRVEEAKEVFNCML 365
+ +++ L + M G P VTY+ + +GL R R E+ K+ M
Sbjct: 596 TK-SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 654
Query: 366 GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH-DNYVYAAMIKGLCRSGKI 424
G+ D TY +I LC L A F +I+ N+ + Y +I LC G I
Sbjct: 655 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFL-EIMKSRNLDASSATYNILIDSLCVYGYI 713
Query: 425 HEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 475
+A F+Y L + V+ + Y +I C A ++ ++ G N
Sbjct: 714 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 764
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 180/394 (45%), Gaps = 25/394 (6%)
Query: 18 PVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKL 77
P + + S L TG +D A +F++M+ G+ P+ + YS+++ G+ + + A L
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA----LWL 462
Query: 78 WERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 137
++ M ++ L N+ L+ LC++G + E + + + + +ID
Sbjct: 463 YDEMCDKRILP-NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 521
Query: 138 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEH 197
+SG A + V+ + G+TPS+ ++NS+++G CK A ++L+ +G PS
Sbjct: 522 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 581
Query: 198 TYKVLVEGL--CGESDLEKARKVLQFMLSKKDVDRTRIC-NIYLRALCLIKNPTELLNVL 254
+Y L++ CG + K+ L+ + + + T + ++ + LC +VL
Sbjct: 582 SYTTLMDAYANCGNT---KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 638
Query: 255 VFMLQTQCQ------------PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 302
+ +C+ PD IT NT+I C++ + A L M + A A
Sbjct: 639 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 698
Query: 303 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 362
T+ +I L G I++A + +Y + Q S Y +++ E A ++F+
Sbjct: 699 -TYNILIDSLCVYGYIRKADSFIYSLQEQ-NVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 756
Query: 363 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 396
+L G Y+ VI+ LC + ++E+K F+
Sbjct: 757 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFF 790
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 10/239 (4%)
Query: 12 FYSPFPPVASLTS---ALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 68
Y P V S T+ A A G ++ EM+ G+ P ++TYSV+ +G+ R E
Sbjct: 573 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 632
Query: 69 RAN-VLMFKLWERMK------EEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGK 121
N VL +++E+ K E E + + + ++ LCR +++ F E M
Sbjct: 633 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 692
Query: 122 SVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAY 181
+IDSLC G A +Y ++++ ++ S +Y +++ C G A
Sbjct: 693 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 752
Query: 182 QLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRA 240
+L + + G+ S Y ++ LC + +++ MLS+ IC + +++
Sbjct: 753 KLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 811
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 179/363 (49%), Gaps = 19/363 (5%)
Query: 127 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 186
FA +I S C+ GR S + ++R R ++ V+YN+++ GLC+HG AYQ L E
Sbjct: 132 FALNVLIHSFCKVGR---LSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSE 188
Query: 187 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIK- 245
++ G LP +Y L++G C KV F+ +K VD N+ + L
Sbjct: 189 MVKMGILPDTVSYNTLIDGFC---------KVGNFVRAKALVDEISELNLITHTILLSSY 239
Query: 246 -NPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 304
N + M+ + PDV+T +++IN CK G++ E +L +M P+ VT
Sbjct: 240 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS-VYPNHVT 298
Query: 305 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM 364
+TT++ L + AL L Y M RG +V Y ++ GLF+ + EA++ F +
Sbjct: 299 YTTLVDSLFKANIYRHALAL-YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 357
Query: 365 LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKI 424
L V + TY ++DGLC++ L A+ ++ S I + Y++MI G + G +
Sbjct: 358 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 417
Query: 425 HEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
EAV L ++ D V PN Y VIDG K + A ++ +EMR G+ + IL
Sbjct: 418 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY---IL 474
Query: 485 DKL 487
D L
Sbjct: 475 DAL 477
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 211/467 (45%), Gaps = 18/467 (3%)
Query: 20 ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79
+S+ + G ++ A + +M V+PN TY ++ G+ + E A E
Sbjct: 405 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA-------IE 457
Query: 80 RMKEEEDLSV--NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 137
KE + V NN LV+ L R G + EV + +DM ++ +ID
Sbjct: 458 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 517
Query: 138 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG--GCMRAYQ-LLEEGIQFGYLP 194
+ G A M++RG+ +VSYN ++ G+ K G G AY+ + E+GI+ P
Sbjct: 518 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIE----P 573
Query: 195 SEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVL 254
T+ +++ + D E K+ M S CNI + LC E +++L
Sbjct: 574 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 633
Query: 255 VFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLN 314
M+ + P++ T ++ K R + K +++ V + T+I L
Sbjct: 634 NQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV-YNTLIATLCK 692
Query: 315 VGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADST 374
+G ++A ++ M RG+ P VT+N+++ G F V +A ++ M+ G+ +
Sbjct: 693 LGMTKKAAMVMGD-MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 751
Query: 375 TYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYEL 434
TY +I GL ++ + E ++ ++ D++ Y A+I G + G + ++ E+
Sbjct: 752 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 811
Query: 435 VDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 481
+ G+ P YNV+I + +A ++L+EM K G++P+ T+
Sbjct: 812 IADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 858
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 209/488 (42%), Gaps = 39/488 (7%)
Query: 38 VFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANL 97
++ +M CGV P+ +VL+ + V R + + L R+ +S++ + +
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCK---VGRLSFAISLLRNRV-----ISIDTVTYNTV 169
Query: 98 VDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRN--------------- 142
+ LC G +E ++ +M + + + + +ID C+ G
Sbjct: 170 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL 229
Query: 143 -------------HGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
H M G P +V+++SI++ LCK G + LL E +
Sbjct: 230 ITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEE 289
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 249
P+ TY LV+ L + A + M+ + + + + L + E
Sbjct: 290 MSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 349
Query: 250 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 309
+L+ P+V+T +++G CK G + A ++ M+ K P+ VT++++I
Sbjct: 350 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE-KSVIPNVVTYSSMI 408
Query: 310 FGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
G + G ++EA++LL + M + P TY V+ GLF+ + E A E+ M IGV
Sbjct: 409 NGYVKKGMLEEAVSLLRK-MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 467
Query: 370 VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH 429
++ +++ L ++ E K D+V D Y ++I + G A+
Sbjct: 468 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 527
Query: 430 FLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 489
+ E+ + G+ ++V YNV+I G K K A + MR+ G+ PD T+ I+
Sbjct: 528 WAEEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMMNSQR 586
Query: 490 NRGNDFGL 497
+G+ G+
Sbjct: 587 KQGDSEGI 594
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 208/465 (44%), Gaps = 17/465 (3%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
++ S L G D AY+ EM G+LP++++Y+ L+ G + + RA L+ ++ E
Sbjct: 168 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE- 226
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
+N L+ S + E +R DM + +I+ LC+ G
Sbjct: 227 --------LNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGG 275
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
+ ++ M + + P+ V+Y ++V L K A L + + G Y
Sbjct: 276 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 335
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 260
VL++GL DL +A K + +L V + LC + + ++ ML+
Sbjct: 336 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 395
Query: 261 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 320
P+V+T +++ING+ K G +EEA+ +L M + P+ T+ T+I GL G+ +
Sbjct: 396 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEM 454
Query: 321 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 380
A+ L + M G +A++ L R+ R++E K + M+ GV D Y +I
Sbjct: 455 AIELSKE-MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 513
Query: 381 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE-LVDSGV 439
D + + A + +++ D Y +I G+ + GK+ + Y+ + + G+
Sbjct: 514 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGI 571
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
P+I +N++++ K ++ +M+ G+ P ++ I+
Sbjct: 572 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIV 616
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 214/481 (44%), Gaps = 12/481 (2%)
Query: 10 TGFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVER 69
+GF +S+ + L G++ + EM V PN +TY+ LV + +
Sbjct: 255 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 314
Query: 70 ANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFAC 129
A L ++ R + V+ + L+D L + G + E + + + + V
Sbjct: 315 ALALYSQMVVR-----GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 369
Query: 130 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 189
++D LC++G A ++ M ++ + P++V+Y+S+++G K G A LL +
Sbjct: 370 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 429
Query: 190 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 249
+P+ TY +++GL E A ++ + M + I + + L I E
Sbjct: 430 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 489
Query: 250 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 309
+ ++ M+ D I ++I+ F K G E AL +M + D V++ +I
Sbjct: 490 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM-QERGMPWDVVSYNVLI 548
Query: 310 FGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 369
G+L G++ + Y+ M ++G P I T+N ++ + E ++++ M G+
Sbjct: 549 SGMLKFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 606
Query: 370 VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH 429
+ IV+ LCE+ +++EA + ++ IH N + K +A+
Sbjct: 607 KPSLMSCNIVVGMLCENGKMEEAIHILNQMML-MEIHPNLTTYRIFLDTSSKHKRADAIF 665
Query: 430 FLYE-LVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 488
+E L+ G+ + YN +I CKL M ++A ++ +M G PD VT+ L +H
Sbjct: 666 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL--MH 723
Query: 489 G 489
G
Sbjct: 724 G 724
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 201/474 (42%), Gaps = 12/474 (2%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L L G++ A K F + +PN +TY+ LV G+ + D+ A ++ ++ E+
Sbjct: 337 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK- 395
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
+ N ++++++ ++G + E + M V F G +ID L ++G+
Sbjct: 396 ----SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 451
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
A + MR G+ + +++V+ L + G L+++ + G + Y
Sbjct: 452 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 511
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
L++ D E A + M + N+ + + L M +
Sbjct: 512 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM-LKFGKVGADWAYKGMREKG 570
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA--PDAVTFTTIIFGLLNVGRIQ 319
+PD+ T N ++N K G E LK+ + M K C P ++ ++ L G+++
Sbjct: 571 IEPDIATFNIMMNSQRKQGDSEGILKLWDKM---KSCGIKPSLMSCNIVVGMLCENGKME 627
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
EA+++L Q+M + P + TY L + +R + + +L G+ Y +
Sbjct: 628 EAIHILNQMMLMEIH-PNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 686
Query: 380 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGV 439
I LC+ +A D+ I D + +++ G + +A+ ++++G+
Sbjct: 687 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 746
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+PN+ YN +I G + +E + L EM+ G+ PD T+ L GN
Sbjct: 747 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 800
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 32/249 (12%)
Query: 264 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 323
PD N++I+ F G + + + ++ + +PD +I VGR+ A++
Sbjct: 93 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 152
Query: 324 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 383
LL R S VTYN V+ GL +EA + + M+ +G++ D+ +Y +IDG
Sbjct: 153 LL----RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 208
Query: 384 CESNQLDEAKRFWDDIVWPS------------NIH----------------DNYVYAAMI 415
C+ AK D+I + N+H D ++++I
Sbjct: 209 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 268
Query: 416 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 475
LC+ GK+ E L E+ + V PN V Y ++D K ++ R A + +M G+
Sbjct: 269 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 328
Query: 476 PDAVTWRIL 484
D V + +L
Sbjct: 329 VDLVVYTVL 337
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 329 MPQRGYSPGIV-----TYNAVLRGLFRL----RRVEEAKEVFNCMLGIGVVADSTTYAIV 379
+ QR + P + Y ++ LFRL R+ A + M GVV DS + +
Sbjct: 42 ITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSL 101
Query: 380 I-----DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYEL 434
I +GL D+ + ++ D + +I C+ G++ A+ L
Sbjct: 102 IHQFNVNGLVH----DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNR 157
Query: 435 VDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
V ++ + V YN VI G C+ + EAYQ L EM K G+ PD V++ L
Sbjct: 158 V---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 204
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 75/218 (34%), Gaps = 43/218 (19%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF SL + + A + M G+ PN TY+ ++RG
Sbjct: 710 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRG---------- 759
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
L G + EV + +M ++F
Sbjct: 760 ------------------------------LSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 789
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I + G G+ + M GL P +YN ++ G ++A +LL+E +
Sbjct: 790 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 849
Query: 191 GYLPSEHTYKVLVEGLCG---ESDLEKARKVLQFMLSK 225
G P+ TY ++ GLC D+E +K + +K
Sbjct: 850 GVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAK 887
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 225/508 (44%), Gaps = 50/508 (9%)
Query: 30 GEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSV 89
G M+ A +FD M G++P + Y+ L+ G R ++V + L+ ++ +R ++ +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR-----NIVI 415
Query: 90 NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVV 149
+ + +V +C G ++ + I ++M +I + ++ R A RV+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 150 YVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGE 209
M+++G+ P + YNS++ GL K A L E ++ G P+ TY + G
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 210 SDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 269
S+ A K ++ M + +C + C E + M+ D T
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 270 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 329
++NG K ++++A ++ +M GK APD ++ +I G +G +Q+A ++ + M
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSI-FDEM 653
Query: 330 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 389
+ G +P ++ YN +L G R +E+AKE+ + M G+ ++ TY +IDG C+S L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 390 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV--------------------- 428
EA R +D++ + D++VY ++ G CR + A+
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 429 -------------HFLYELVDSGV----TPNIVCYNVVIDGACKLSMKREAYQILREMRK 471
L L+D PN V YN++ID CK A ++ +M+
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 472 NGLNPDAVTWRIL----DKLHGNRGNDF 495
L P +T+ L DK+ G R F
Sbjct: 834 ANLMPTVITYTSLLNGYDKM-GRRAEMF 860
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 11/465 (2%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L L ++ A + EM GV ++ TYS+L+ G+L+ R+ + A L+ ++
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH- 341
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
+++ + + + +EG + + + + M + + A +I+ CR
Sbjct: 342 ----GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
++ M+KR + S +Y ++V G+C G AY +++E I G P+ Y
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
L++ S A +VL+ M + N + L K E + LV M++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA--PDAVTFTTIIFGLLNVGRIQ 319
+P+ T I+G+ + A K + +M + C P+ V T +I G++
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 320 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 379
EA + Y+ M +G TY ++ GLF+ +V++A+E+F M G G+ D +Y ++
Sbjct: 575 EACSA-YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 380 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGV 439
I+G + + +A +D++V + +Y ++ G CRSG+I +A L E+ G+
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 440 TPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
PN V Y +IDG CK EA+++ EM+ GL PD+ + L
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 212/472 (44%), Gaps = 21/472 (4%)
Query: 22 LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERM 81
L AL +D+ + V+ M V+ + TY +L+ R +V+ ++FK
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK---TE 248
Query: 82 KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 141
KE ++N V+ ++ E M V ++ +ID LC+ R
Sbjct: 249 KEFRTATLN----------------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292
Query: 142 NHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV 201
A ++ M G++ +Y+ ++ GL K A L+ E + G + Y
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 202 LVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQ 261
+ + E +EKA+ + M++ + + + + C KN + +LV M +
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 262 CQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEA 321
T TV+ G C G ++ A ++ +M+A C P+ V +TT+I L R +A
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 322 LNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVID 381
+ +L + M ++G +P I YN+++ GL + +R++EA+ M+ G+ ++ TY I
Sbjct: 472 MRVLKE-MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 382 GLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTP 441
G E+++ A ++ ++ + + + +I C+ GK+ EA +VD G+
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 442 NIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+ Y V+++G K +A +I REMR G+ PD ++ +L GN
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 197/469 (42%), Gaps = 17/469 (3%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
SL L+ MD A EM G+ PN+ TY + G + + A+ K +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD----KYVKE 547
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
M+E L N L++ C++G V E M + + +++ L ++
Sbjct: 548 MRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
+ A + MR +G+ P + SY +++G K G +A + +E ++ G P+ Y
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKK-DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
+L+ G C ++EKA+++L M K + C I + C + E + M
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI-IDGYCKSGDLAEAFRLFDEMKL 725
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 319
PD T+++G C++ +E A+ + G CA F +I + G+ +
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG--CASSTAPFNALINWVFKFGKTE 783
Query: 320 ---EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 376
E LN L R P VTYN ++ L + +E AKE+F+ M ++ TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 377 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV-----HFL 431
+++G + + E +D+ + D+ +Y+ +I + G +A+ F
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 480
VD G +I ++ G K+ A +++ M + PD+ T
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 29 TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS 88
+G++ A+++FDEM+ G++P+S Y+ LV G R DVERA + +F ++ +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFG-----TNKKGCA 763
Query: 89 VNNAAFANLVDSLCREGYVNEVFRIAEDMPQGK----SVNEEFACGHMIDSLCRSGRNHG 144
+ A F L++ + + G + + G + MID LC+ G
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 145 ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVE 204
A + + M+ L P++++Y S+++G K G + + +E I G P Y V++
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 205 GLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQP 264
E KA ++ M +K VD C+
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVD------------------------------DGCKL 913
Query: 265 DVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 309
+ T +++GF K+G +E A KV+ +MV ++ PD+ T +I
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI-PDSATVIELI 957
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 47/277 (16%)
Query: 244 IKNPTELLNVLVFM-LQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 302
+ +P++LL+ ++ Q + + + + + C G E+AL V+ M+ + P A
Sbjct: 74 VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW--PVA 131
Query: 303 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 362
+++I+ R + G S V + + G +EEA VF+
Sbjct: 132 EVWSSIV-------RCSQEF---------VGKSDDGVLFGILFDGYIAKGYIEEAVFVFS 175
Query: 363 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD---DIVWPSNIHDNYVYAAMIKGLC 419
+G+ +V + +++D L N+LD FWD +V + + D Y +I C
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLD---LFWDVYKGMVERNVVFDVKTYHMLIIAHC 232
Query: 420 RSGKIHEAVHFLYE---------------------LVDSGVTPNIVCYNVVIDGACKLSM 458
R+G + L++ ++ G+ P Y+V+IDG CK+
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292
Query: 459 KREAYQILREMRKNGLNPDAVTWRIL-DKLHGNRGND 494
+A +L EM G++ D T+ +L D L R D
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 17 PPVASLTSAL---AITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 73
P V + TS L G + VFDE G+ P+ + YSV++ L+ +A VL
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 74 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMI 133
+ +++ + ++ ++ + L+ + G + ++ E+M + + + + +I
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 134 DSLCRS 139
+ C S
Sbjct: 958 NESCIS 963
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 219/456 (48%), Gaps = 10/456 (2%)
Query: 31 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 90
+ D A+ +F EM +P+ + ++ ++ + + + ++ L+ +M E +S +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD----IVIYLYHKM-ENLGISHD 113
Query: 91 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 150
+F L+ CR ++ + M + G +++ C+ R A +V
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 151 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 210
M G P++V YN++++GLCK+ A ++ + G TY L+ GL
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 211 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 270
A ++L+ M+ +K + N E N+ M++ P+V T N
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 271 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 330
++INGFC G + +A K + D++ K C PD VT+ T+I G R+++ + L + M
Sbjct: 294 SLINGFCIHGCLGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE-MT 351
Query: 331 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 390
+G TYN ++ G + ++ A++VFN M+ GV D TY I++D LC + +++
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 391 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 450
+A +D+ D Y +I+GLCR+ K+ EA L GV P+ + Y +I
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 451 DGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
G C+ ++REA ++ R M+++G P + RI D+
Sbjct: 472 SGLCRKGLQREADKLCRRMKEDGFMP---SERIYDE 504
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 197/436 (45%), Gaps = 10/436 (2%)
Query: 15 PFPPVASLTSALAITGEM---DVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P + T L + +M D+ ++ +M + G+ + ++++L+ R + A
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 131
L+ K+ MK S+ +L++ C+ E + + M V
Sbjct: 135 ALLGKM---MKLGFRPSI--VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 132 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 191
+I+ LC++ + A V Y M K+G+ V+YN+++ GL G A +LL + ++
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
P+ + L++ E +L +AR + + M+ + V N + C+ +
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
+ M+ C PDV+T NT+I GFCK R+E+ +K+ +M DA T+ T+I G
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-DAFTYNTLIHG 368
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
G++ A + + M G SP IVTYN +L L ++E+A + + +
Sbjct: 369 YCQAGKLNVAQKV-FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
D TY I+I GLC +++L EA + + D Y MI GLCR G EA
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 432 YELVDSGVTPNIVCYN 447
+ + G P+ Y+
Sbjct: 488 RRMKEDGFMPSERIYD 503
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 171/397 (43%), Gaps = 46/397 (11%)
Query: 11 GFYSPFPPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 70
GF + SL + A + D M G +PN + Y+ ++ G+ + RD+ A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 71 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 130
+ + + E++ + + + L+ L G + R+ DM + K
Sbjct: 204 LEVFYCM-----EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+ID+ + G A + M +R + P++ +YNS+++G C HG A + + +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
G P TY L+ G C +E K+ C + + L
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLF--------------CEMTYQGLV-------- 356
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 310
D T NT+I+G+C+ G++ A KV N MV +PD VT+ ++
Sbjct: 357 -------------GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV-SPDIVTYNILLD 402
Query: 311 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 370
L N G+I++AL ++ + + + I+TYN +++GL R +++EA +F + GV
Sbjct: 403 CLCNNGKIEKAL-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 371 ADSTTYAIVIDGLCESNQLDEA----KRFWDDIVWPS 403
D+ Y +I GLC EA +R +D PS
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 125/289 (43%), Gaps = 7/289 (2%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L S L+ +G A ++ +M + PN + ++ L+ ++ ++ A L ++ R
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
+ N + +L++ C G + + + + M + +I C+S
Sbjct: 284 -----SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
R ++ M +GL +YN+++HG C+ G A ++ + G P TY
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 201 VLVEGLCGESDLEKARKVLQ-FMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQ 259
+L++ LC +EKA +++ S+ DVD NI ++ LC E + + +
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY-NIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 260 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 308
+PD I T+I+G C+ G EA K+ M F + + T+
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 2/213 (0%)
Query: 281 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 340
+ ++A + +M+ + P V FT ++ + + + + LY M G S + +
Sbjct: 59 KFDDAFSLFCEMLQSR-PIPSIVDFTRVLTVIAKMNKFDIVI-YLYHKMENLGISHDLYS 116
Query: 341 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 400
+ ++ R R+ A + M+ +G T +++G C+ N+ EA D +
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 401 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 460
+ + +Y +I GLC++ ++ A+ Y + G+ + V YN +I G
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 461 EAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 493
+A ++LR+M K ++P+ + + L GN
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 224/508 (44%), Gaps = 45/508 (8%)
Query: 15 PFPPVAS---LTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERAN 71
P P V + L + GEMD A+ +F M G+ P+ + YS L+ G + + +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 72 VLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP-QGKSVNEEFACG 130
L + + + ++ F++ +D + G + + + M QG S N
Sbjct: 342 KLFSQALHK-----GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV-VTYT 395
Query: 131 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 190
+I LC+ GR + A + + KRG+ PS+V+Y+S++ G CK G + L E+ I+
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 191 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 250
GY P Y VLV+GL + + A + ML + + N + C + E
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 251 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII- 309
L V M +PDV T TV+ GR+EEAL + M PDA+ + T+I
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL-EPDALAYCTLID 574
Query: 310 --------------FGLLNVGRIQE-------ALNLLYQV------------MPQRGYSP 336
F L+ +I ++LL++ + + P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 337 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 396
IVTYN ++ G LRR++EA+ +F + ++ T I+I LC++N +D A R +
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 397 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 456
+ + + Y ++ +S I + E+ + G++P+IV Y+++IDG CK
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 457 SMKREAYQILREMRKNGLNPDAVTWRIL 484
EA I + L PD V + IL
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 228/464 (49%), Gaps = 19/464 (4%)
Query: 29 TGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS 88
+G++ A V+ M G+ PN +TY++L++G+ + + A + ++ +R E ++
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 89 VNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRV 148
+++L+D C+ G + F + EDM + + G ++D L + G A R
Sbjct: 429 -----YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 149 VYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 208
M + + ++V +NS++ G C+ A ++ +G P T+ ++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 209 ESDLEKARKVLQFMLSKKDV--DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDV 266
E LE+A L F + K + D C + + A C PT L + M + + D+
Sbjct: 544 EGRLEEAL-FLFFRMFKMGLEPDALAYCTL-IDAFCKHMKPTIGLQLFDLMQRNKISADI 601
Query: 267 ITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLY 326
N VI+ K RIE+A K N+++ GK PD VT+ T+I G ++ R+ EA ++
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEA-ERIF 659
Query: 327 QVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCES 386
+++ + P VT ++ L + ++ A +F+ M G ++ TY ++D +S
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 387 NQLDEAKRFWDDI----VWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 442
++ + + ++++ + PS + Y+ +I GLC+ G++ EA + ++ +D+ + P+
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVS----YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 443 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 486
+V Y ++I G CK+ EA + M +NG+ PD + R L +
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 205/470 (43%), Gaps = 40/470 (8%)
Query: 17 PPVASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFK 76
P ++ L G DVA KVFDEM + ++VL G +R R ++ A+V F
Sbjct: 100 PSFYTIAHVLIRNGMFDVADKVFDEM----ITNRGKDFNVL--GSIRDRSLD-ADVCKF- 151
Query: 77 LWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSL 136
L++ CR G V++ I Q V + + M++SL
Sbjct: 152 --------------------LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 137 CRSGRNHGASRVVYVMRKRGLTPSLVS-YNSIVHGLCKHGGCMRAYQL----LEEGIQFG 191
S R + + + G+ PS VS + ++ L G +A +E G + G
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 192 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 251
+ K L +E A ++L +L + C
Sbjct: 252 IVSCNKVLKGL-----SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 252 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 311
++ M Q +PD+I +T+I+G+ K G + K+ + + K D V F++ I
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDV 365
Query: 312 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 371
+ G + A +++Y+ M +G SP +VTY +++GL + R+ EA ++ +L G+
Sbjct: 366 YVKSGDLATA-SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 372 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 431
TY+ +IDG C+ L ++D++ D +Y ++ GL + G + A+ F
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 432 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 481
+++ + N+V +N +IDG C+L+ EA ++ R M G+ PD T+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 45/336 (13%)
Query: 152 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY-LPSEHTYKVLVEGLCGES 210
+R R L + + ++ C++G +A ++ Q G +P + Y++L L G
Sbjct: 139 IRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSD 195
Query: 211 DLEKARKVLQFMLSKKDVDRTRIC--NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVIT 268
++ L + ++ + + L AL T+ L+ +++ + +++
Sbjct: 196 RVDLIADHFD-KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS 254
Query: 269 LNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV 328
N V+ G + +IE A ++L+ +V AP+ VTF T+I G G + A +L ++V
Sbjct: 255 CNKVLKGL-SVDQIEVASRLLS-LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL-FKV 311
Query: 329 MPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQ 388
M QRG P ++ Y+ ++ G F+ + ++F+ L GV D ++ ID +S
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 389 LDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNV 448
L A + VY M LC+ G++PN+V Y +
Sbjct: 372 LATA---------------SVVYKRM---LCQ-----------------GISPNVVTYTI 396
Query: 449 VIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 484
+I G C+ EA+ + ++ K G+ P VT+ L
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 216/451 (47%), Gaps = 43/451 (9%)
Query: 36 YKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFA 95
+ F+E + VL + ++ +L++G ++E++ L+ +L E S N +
Sbjct: 149 WSFFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEF-----GFSPNVVIYT 202
Query: 96 NLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKR 155
L+D C++G + + + +M + V E +I+ L ++G + M++
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 156 GLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 215
G+ P+L +YN +++ LCK G A+Q+ +E + G + TY L+ GLC E L +A
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 216 RKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 275
KV VD+ + I P++IT NT+I+G
Sbjct: 323 NKV---------VDQMKSDGI--------------------------NPNLITYNTLIDG 347
Query: 276 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 335
FC +G++ +AL + D+ + +P VT+ ++ G G A ++ + M +RG
Sbjct: 348 FCGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE-MEERGIK 405
Query: 336 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 395
P VTY ++ R +E+A ++ M +G+V D TY+++I G C Q++EA R
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 396 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 455
+ +V + + +Y MI G C+ G + A+ L E+ + + PN+ Y +I+ CK
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 456 LSMKREAYQILREMRKNGLNPDAVTWRILDK 486
+EA +++ +M +G++P ++ +
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 187/386 (48%), Gaps = 44/386 (11%)
Query: 30 GEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLM--------------- 74
GE++ ++ + E+ G PN + Y+ L+ G + ++E+A L
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 75 ----------------FKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM- 117
F+++E+M +E+ + N + +++ LC++G + F++ ++M
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKM-QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 118 PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGC 177
+G S N +I LCR + + A++VV M+ G+ P+L++YN+++ G C G
Sbjct: 296 ERGVSCN-IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 178 MRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM----LSKKDVDRTRI 233
+A L + G PS TY +LV G C + D A K+++ M + V T +
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 234 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 293
+ + R+ N + + + + M + PDV T + +I+GFC G++ EA ++ MV
Sbjct: 415 IDTFARS----DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 294 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 353
K C P+ V + T+I G G AL LL + M ++ +P + +Y ++ L + R+
Sbjct: 471 E-KNCEPNEVIYNTMILGYCKEGSSYRALKLLKE-MEEKELAPNVASYRYMIEVLCKERK 528
Query: 354 VEEAKEVFNCMLGIGVVADSTTYAIV 379
+EA+ + M+ G+ ++ +++
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 157/323 (48%), Gaps = 7/323 (2%)
Query: 164 YNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFML 223
Y I++ + + E + G++P + + L+ + G S +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 224 SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIE 283
SK +D I ++ C + ++L+ + + P+V+ T+I+G CK G IE
Sbjct: 157 SKVVLDVYSF-GILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 284 EALKVLNDMVAGKF-CAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN 342
+A + +M GK + T+T +I GL G ++ + Y+ M + G P + TYN
Sbjct: 216 KAKDLFFEM--GKLGLVANERTYTVLINGLFKNGVKKQGFEM-YEKMQEDGVFPNLYTYN 272
Query: 343 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWP 402
V+ L + R ++A +VF+ M GV + TY +I GLC +L+EA + D +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KS 331
Query: 403 SNIHDNYV-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE 461
I+ N + Y +I G C GK+ +A+ +L G++P++V YN+++ G C+
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 462 AYQILREMRKNGLNPDAVTWRIL 484
A ++++EM + G+ P VT+ IL
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTIL 414
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 21 SLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWER 80
+L G++ A + +++ G+ P+ +TY++LV G R D A K+ +
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA----KMVKE 398
Query: 81 MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSG 140
M EE + + + L+D+ R + + ++ M + V + +I C G
Sbjct: 399 M-EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 141 RNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYK 200
+ + ASR+ M ++ P+ V YN+++ G CK G RA +LL+E + P+ +Y+
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 201 VLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRA 240
++E LC E ++A ++++ M+ T I ++ RA
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,784,750
Number of Sequences: 539616
Number of extensions: 7818667
Number of successful extensions: 28443
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 17012
Number of HSP's gapped (non-prelim): 3124
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)