Query 010854
Match_columns 499
No_of_seqs 129 out of 2186
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 05:19:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010854.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010854hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.3E-75 2.9E-80 575.3 43.6 464 2-493 69-534 (537)
2 KOG1177 Long chain fatty acid 100.0 1.5E-74 3.2E-79 529.0 33.7 468 2-494 99-590 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 1.5E-72 3.3E-77 550.4 44.9 454 4-491 64-522 (528)
4 PLN03052 acetate--CoA ligase; 100.0 9.2E-71 2E-75 576.3 51.6 497 2-499 230-728 (728)
5 PLN03051 acyl-activating enzym 100.0 6.3E-69 1.4E-73 545.5 48.8 488 12-499 1-499 (499)
6 COG0318 CaiC Acyl-CoA syntheta 100.0 3.5E-67 7.7E-72 534.2 45.5 457 2-491 60-527 (534)
7 PTZ00237 acetyl-CoA synthetase 100.0 7.8E-66 1.7E-70 536.3 45.8 479 2-492 114-624 (647)
8 PLN02654 acetate-CoA ligase 100.0 2.4E-64 5.2E-69 526.8 48.5 476 2-492 142-641 (666)
9 TIGR02316 propion_prpE propion 100.0 2.5E-63 5.3E-68 517.9 50.0 475 2-492 105-605 (628)
10 PRK07788 acyl-CoA synthetase; 100.0 1.6E-63 3.4E-68 513.0 42.6 449 2-487 96-547 (549)
11 KOG1175 Acyl-CoA synthetase [L 100.0 2.4E-63 5.2E-68 486.1 41.4 479 2-492 118-603 (626)
12 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1E-62 2.2E-67 514.1 48.0 476 2-492 110-603 (625)
13 PRK03584 acetoacetyl-CoA synth 100.0 2.9E-62 6.3E-67 512.7 47.5 479 2-492 136-626 (655)
14 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.3E-62 5E-67 511.2 46.3 475 2-492 136-627 (652)
15 PRK00174 acetyl-CoA synthetase 100.0 9.2E-62 2E-66 507.6 49.8 474 2-492 120-611 (637)
16 PRK06334 long chain fatty acid 100.0 1.2E-62 2.6E-67 503.6 41.3 455 3-493 65-537 (539)
17 PRK04319 acetyl-CoA synthetase 100.0 1E-61 2.2E-66 501.4 47.1 458 2-491 95-559 (570)
18 PRK07529 AMP-binding domain pr 100.0 1.1E-61 2.4E-66 505.1 46.6 467 2-492 80-571 (632)
19 PRK10524 prpE propionyl-CoA sy 100.0 4.3E-61 9.4E-66 502.1 47.8 475 2-492 106-606 (629)
20 PLN02860 o-succinylbenzoate-Co 100.0 7.1E-61 1.5E-65 494.0 44.6 467 2-496 54-559 (563)
21 PLN02574 4-coumarate--CoA liga 100.0 1.5E-60 3.2E-65 491.4 44.8 460 2-495 89-558 (560)
22 PLN02736 long-chain acyl-CoA s 100.0 8.4E-61 1.8E-65 500.6 41.1 465 2-495 100-645 (651)
23 PRK13295 cyclohexanecarboxylat 100.0 1.4E-59 3E-64 483.3 46.8 462 2-491 77-544 (547)
24 PRK06060 acyl-CoA synthetase; 100.0 4.6E-60 9.9E-65 499.8 44.2 436 2-490 52-491 (705)
25 COG1021 EntE Peptide arylation 100.0 2.8E-61 6E-66 431.9 28.1 461 2-492 75-539 (542)
26 PRK05677 long-chain-fatty-acid 100.0 2.2E-59 4.8E-64 483.1 46.2 465 2-494 72-560 (562)
27 PLN02614 long-chain acyl-CoA s 100.0 3.8E-60 8.3E-65 494.2 39.6 465 2-495 101-653 (666)
28 PRK13382 acyl-CoA synthetase; 100.0 1.4E-59 3E-64 481.7 42.9 444 2-487 90-536 (537)
29 PLN02246 4-coumarate--CoA liga 100.0 5E-59 1.1E-63 478.4 46.3 454 2-491 72-536 (537)
30 PRK08314 long-chain-fatty-acid 100.0 4.9E-59 1.1E-63 480.0 44.8 463 2-492 58-543 (546)
31 PRK07008 long-chain-fatty-acid 100.0 9.6E-59 2.1E-63 476.0 45.3 459 2-491 61-533 (539)
32 PRK07638 acyl-CoA synthetase; 100.0 4E-59 8.7E-64 473.6 40.5 435 3-493 48-483 (487)
33 PRK09274 peptide synthase; Pro 100.0 8.5E-59 1.8E-63 478.4 41.9 460 2-494 63-551 (552)
34 PLN02861 long-chain-fatty-acid 100.0 8.2E-59 1.8E-63 484.7 40.9 464 2-495 99-650 (660)
35 PRK08043 bifunctional acyl-[ac 100.0 9.7E-59 2.1E-63 489.9 41.3 457 2-492 252-714 (718)
36 TIGR03098 ligase_PEP_1 acyl-Co 100.0 6E-58 1.3E-62 468.9 45.7 460 2-487 47-514 (515)
37 PRK07445 O-succinylbenzoic aci 100.0 1.4E-58 3.1E-63 462.1 40.1 407 3-495 43-451 (452)
38 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 6.2E-58 1.3E-62 470.3 44.4 457 2-486 75-537 (538)
39 PRK06839 acyl-CoA synthetase; 100.0 5.4E-58 1.2E-62 467.0 43.4 442 2-491 50-495 (496)
40 PRK07656 long-chain-fatty-acid 100.0 6.1E-58 1.3E-62 468.7 43.8 456 2-487 52-512 (513)
41 PRK05605 long-chain-fatty-acid 100.0 7.3E-58 1.6E-62 473.4 44.9 467 2-494 79-572 (573)
42 PRK12583 acyl-CoA synthetase; 100.0 1.1E-57 2.4E-62 471.3 45.9 472 2-495 67-556 (558)
43 PRK08316 acyl-CoA synthetase; 100.0 8.6E-58 1.9E-62 468.7 44.0 462 2-494 58-522 (523)
44 PRK07769 long-chain-fatty-acid 100.0 6.7E-58 1.4E-62 478.0 42.9 453 2-491 76-614 (631)
45 PLN02330 4-coumarate--CoA liga 100.0 1.3E-57 2.8E-62 468.5 44.4 456 2-493 77-543 (546)
46 PRK05852 acyl-CoA synthetase; 100.0 1.5E-57 3.2E-62 467.1 43.9 457 2-491 65-532 (534)
47 PRK05857 acyl-CoA synthetase; 100.0 1.4E-57 3.1E-62 467.2 43.5 454 2-492 63-532 (540)
48 PRK07470 acyl-CoA synthetase; 100.0 1.4E-57 3E-62 467.1 43.2 455 2-492 54-519 (528)
49 PTZ00342 acyl-CoA synthetase; 100.0 7.7E-58 1.7E-62 475.7 41.7 467 6-497 131-740 (746)
50 PRK06187 long-chain-fatty-acid 100.0 2.2E-57 4.8E-62 465.6 44.6 459 2-491 53-519 (521)
51 PRK06087 short chain acyl-CoA 100.0 2.5E-57 5.5E-62 467.0 45.1 468 2-497 71-542 (547)
52 PRK08315 AMP-binding domain pr 100.0 2.5E-57 5.5E-62 468.6 44.8 474 2-497 65-557 (559)
53 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.5E-57 5.4E-62 462.7 44.0 447 2-490 47-501 (502)
54 PRK05620 long-chain-fatty-acid 100.0 2.6E-57 5.7E-62 469.1 43.6 471 2-492 61-558 (576)
55 PLN03102 acyl-activating enzym 100.0 3.9E-57 8.4E-62 466.9 44.4 467 2-492 61-555 (579)
56 PRK07786 long-chain-fatty-acid 100.0 4E-57 8.6E-62 464.6 44.1 461 2-496 64-529 (542)
57 PRK06155 crotonobetaine/carnit 100.0 6.5E-57 1.4E-61 462.2 44.8 451 2-490 68-523 (542)
58 PRK09088 acyl-CoA synthetase; 100.0 7.5E-57 1.6E-61 457.3 43.8 437 2-492 44-486 (488)
59 TIGR03443 alpha_am_amid L-amin 100.0 1.1E-57 2.5E-62 515.5 41.7 469 2-489 292-826 (1389)
60 PRK12467 peptide synthase; Pro 100.0 5E-58 1.1E-62 550.4 39.7 445 2-490 3142-3593(3956)
61 PRK06145 acyl-CoA synthetase; 100.0 1.2E-56 2.7E-61 456.9 44.0 445 2-490 49-496 (497)
62 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 8.4E-57 1.8E-61 460.8 42.9 454 2-486 70-527 (527)
63 PRK12476 putative fatty-acid-- 100.0 4.3E-57 9.4E-62 469.9 41.1 450 2-491 89-606 (612)
64 PRK07514 malonyl-CoA synthase; 100.0 1.8E-56 3.9E-61 456.7 44.8 450 2-493 50-503 (504)
65 PLN02387 long-chain-fatty-acid 100.0 2.9E-57 6.2E-62 474.9 39.3 471 2-495 128-693 (696)
66 PRK12492 long-chain-fatty-acid 100.0 2.6E-56 5.6E-61 460.3 45.7 459 2-488 72-561 (562)
67 PRK06018 putative acyl-CoA syn 100.0 2.9E-56 6.3E-61 458.2 45.9 459 2-491 61-534 (542)
68 PRK08279 long-chain-acyl-CoA s 100.0 9.5E-57 2.1E-61 467.2 42.4 464 2-493 84-566 (600)
69 PRK08633 2-acyl-glycerophospho 100.0 5.4E-57 1.2E-61 503.6 41.9 467 2-492 662-1144(1146)
70 PRK05851 long-chain-fatty-acid 100.0 5E-57 1.1E-61 461.5 38.0 435 3-491 52-522 (525)
71 PRK10946 entE enterobactin syn 100.0 4.4E-56 9.6E-61 455.9 45.0 460 2-494 70-535 (536)
72 PRK07787 acyl-CoA synthetase; 100.0 2.1E-56 4.5E-61 451.5 41.4 425 2-488 42-470 (471)
73 PRK06188 acyl-CoA synthetase; 100.0 3.8E-56 8.2E-61 456.0 43.9 453 2-491 59-517 (524)
74 PRK08008 caiC putative crotono 100.0 4.4E-56 9.6E-61 454.9 43.8 452 2-486 59-517 (517)
75 PRK10252 entF enterobactin syn 100.0 1.1E-56 2.4E-61 505.8 42.1 444 2-488 505-964 (1296)
76 PRK06164 acyl-CoA synthetase; 100.0 1.3E-55 2.8E-60 453.8 45.0 470 2-497 57-538 (540)
77 PRK07867 acyl-CoA synthetase; 100.0 9.4E-56 2E-60 452.0 43.7 443 2-491 51-507 (529)
78 PRK03640 O-succinylbenzoic aci 100.0 4.6E-56 1E-60 451.2 41.0 432 2-491 49-482 (483)
79 PRK12316 peptide synthase; Pro 100.0 6.3E-57 1.4E-61 549.0 41.0 443 2-489 558-1004(5163)
80 PRK08751 putative long-chain f 100.0 8E-56 1.7E-60 457.1 43.2 460 2-489 73-558 (560)
81 PRK13383 acyl-CoA synthetase; 100.0 3.7E-56 8.1E-61 454.8 40.1 429 2-486 82-515 (516)
82 PRK04813 D-alanine--poly(phosp 100.0 1.2E-55 2.7E-60 450.6 43.4 447 2-490 49-502 (503)
83 PRK12406 long-chain-fatty-acid 100.0 5E-55 1.1E-59 446.1 47.3 456 2-492 33-504 (509)
84 PLN02430 long-chain-fatty-acid 100.0 5.5E-56 1.2E-60 462.5 40.3 466 2-495 98-650 (660)
85 TIGR02262 benz_CoA_lig benzoat 100.0 1.4E-55 3.1E-60 450.0 42.5 453 2-487 52-507 (508)
86 PRK12316 peptide synthase; Pro 100.0 1.8E-56 3.8E-61 545.1 41.9 446 2-489 2050-2502(5163)
87 PRK12467 peptide synthase; Pro 100.0 7E-57 1.5E-61 540.6 37.7 452 2-490 1621-2084(3956)
88 PRK07059 Long-chain-fatty-acid 100.0 2.4E-55 5.2E-60 453.1 44.0 459 2-488 70-555 (557)
89 PRK13388 acyl-CoA synthetase; 100.0 2.6E-55 5.6E-60 450.2 43.5 443 3-492 50-507 (540)
90 PRK06178 acyl-CoA synthetase; 100.0 2.2E-55 4.8E-60 454.3 43.4 464 2-492 80-566 (567)
91 PRK13390 acyl-CoA synthetase; 100.0 1.9E-55 4.2E-60 448.3 41.7 447 2-486 46-501 (501)
92 PRK06710 long-chain-fatty-acid 100.0 4.2E-55 9.2E-60 451.8 43.4 464 2-495 71-559 (563)
93 PRK07798 acyl-CoA synthetase; 100.0 1.4E-54 3.1E-59 446.0 46.0 464 2-492 50-533 (533)
94 PRK08180 feruloyl-CoA synthase 100.0 1.6E-55 3.5E-60 458.0 38.9 457 2-495 91-600 (614)
95 PRK07868 acyl-CoA synthetase; 100.0 5.1E-55 1.1E-59 472.1 43.0 449 2-491 494-958 (994)
96 PRK08276 long-chain-fatty-acid 100.0 3.2E-54 6.8E-59 439.6 44.9 457 2-494 33-499 (502)
97 KOG1256 Long-chain acyl-CoA sy 100.0 4.4E-55 9.5E-60 426.5 36.1 466 2-495 130-684 (691)
98 COG1022 FAA1 Long-chain acyl-C 100.0 1.9E-55 4.1E-60 436.0 34.0 450 2-495 67-605 (613)
99 PRK08974 long-chain-fatty-acid 100.0 4.6E-54 9.9E-59 443.9 45.7 464 2-494 71-558 (560)
100 PRK06814 acylglycerophosphoeth 100.0 1.1E-54 2.4E-59 483.1 43.9 458 2-497 679-1138(1140)
101 PTZ00216 acyl-CoA synthetase; 100.0 5.3E-55 1.1E-59 459.0 37.2 465 2-495 143-695 (700)
102 PLN02479 acetate-CoA ligase 100.0 4.9E-54 1.1E-58 443.6 43.6 472 2-499 67-567 (567)
103 PRK05691 peptide synthase; Val 100.0 5.3E-55 1.2E-59 528.8 42.3 449 2-488 3767-4225(4334)
104 PRK13391 acyl-CoA synthetase; 100.0 1E-53 2.2E-58 436.6 44.6 457 2-491 46-509 (511)
105 TIGR03205 pimA dicarboxylate-- 100.0 1.4E-53 3.1E-58 438.3 44.5 457 2-486 68-541 (541)
106 PRK08308 acyl-CoA synthetase; 100.0 8E-54 1.7E-58 425.2 40.4 378 2-485 29-407 (414)
107 PRK05691 peptide synthase; Val 100.0 2E-54 4.4E-59 523.8 41.8 443 2-488 1178-1625(4334)
108 PRK09029 O-succinylbenzoic aci 100.0 1.7E-53 3.6E-58 428.9 40.8 407 2-495 50-457 (458)
109 PRK08162 acyl-CoA synthetase; 100.0 2.8E-52 6E-57 429.5 46.3 462 2-492 65-540 (545)
110 TIGR01923 menE O-succinylbenzo 100.0 5.1E-53 1.1E-57 423.3 38.5 414 2-485 21-436 (436)
111 PRK12582 acyl-CoA synthetase; 100.0 2.4E-53 5.3E-58 442.5 37.3 457 2-495 102-611 (624)
112 KOG1180 Acyl-CoA synthetase [L 100.0 1.5E-53 3.2E-58 397.4 28.8 471 2-495 111-673 (678)
113 PRK09192 acyl-CoA synthetase; 100.0 1.4E-52 2.9E-57 433.9 39.0 444 2-491 71-566 (579)
114 PRK05850 acyl-CoA synthetase; 100.0 1.9E-51 4E-56 426.1 39.0 452 3-492 57-569 (578)
115 PRK07768 long-chain-fatty-acid 100.0 1.9E-50 4.1E-55 415.7 41.1 440 2-490 51-544 (545)
116 KOG1179 Very long-chain acyl-C 100.0 4.7E-50 1E-54 375.7 29.8 462 2-489 126-611 (649)
117 TIGR01733 AA-adenyl-dom amino 100.0 7.4E-48 1.6E-52 382.7 36.2 378 2-415 22-408 (408)
118 PRK07824 O-succinylbenzoic aci 100.0 3.4E-45 7.3E-50 356.3 32.9 322 125-492 32-358 (358)
119 PF00501 AMP-binding: AMP-bind 100.0 5E-46 1.1E-50 370.5 21.7 360 2-390 43-417 (417)
120 PTZ00297 pantothenate kinase; 100.0 1E-40 2.2E-45 360.8 35.3 430 2-495 479-999 (1452)
121 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3.5E-40 7.6E-45 319.1 27.2 289 128-481 95-386 (386)
122 TIGR02155 PA_CoA_ligase phenyl 100.0 3.6E-36 7.9E-41 298.6 28.3 327 125-483 72-418 (422)
123 COG1020 EntF Non-ribosomal pep 100.0 2.2E-32 4.7E-37 287.0 31.9 362 2-408 274-642 (642)
124 TIGR03335 F390_ftsA coenzyme F 100.0 3.7E-30 7.9E-35 255.7 28.0 330 124-482 82-440 (445)
125 KOG1178 Non-ribosomal peptide 100.0 4.2E-30 9.2E-35 264.8 22.7 453 3-487 92-575 (1032)
126 KOG3628 Predicted AMP-binding 100.0 2.8E-27 6.1E-32 236.7 30.5 467 2-494 824-1355(1363)
127 COG1541 PaaK Coenzyme F390 syn 100.0 5.2E-26 1.1E-30 214.2 26.5 324 123-481 85-429 (438)
128 PRK09188 serine/threonine prot 99.9 1.2E-21 2.7E-26 185.5 13.0 121 359-494 207-331 (365)
129 TIGR03089 conserved hypothetic 99.8 1.4E-18 3.1E-23 156.0 17.6 174 2-219 50-227 (227)
130 TIGR02304 aden_form_hyp probab 99.8 2E-17 4.4E-22 160.6 25.5 246 130-418 101-366 (430)
131 KOG3628 Predicted AMP-binding 99.7 1.3E-14 2.8E-19 146.9 22.1 445 2-491 147-704 (1363)
132 PF13193 AMP-binding_C: AMP-bi 99.3 1.3E-11 2.9E-16 89.3 6.4 70 398-479 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 9.3E-09 2E-13 98.1 16.6 228 125-385 86-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.6 4.6E-07 9.9E-12 91.7 11.5 165 242-437 266-452 (528)
135 PLN02249 indole-3-acetic acid- 98.2 0.00019 4.1E-09 73.2 20.5 43 363-405 410-456 (597)
136 PF14535 AMP-binding_C_2: AMP- 98.1 1.1E-05 2.4E-10 61.5 7.2 87 391-482 1-91 (96)
137 PLN02247 indole-3-acetic acid- 98.0 0.0022 4.7E-08 65.1 22.3 43 363-405 417-463 (606)
138 PLN02620 indole-3-acetic acid- 97.9 0.00095 2.1E-08 67.5 19.1 136 242-405 303-469 (612)
139 PF00501 AMP-binding: AMP-bind 81.5 6.4 0.00014 38.9 8.2 89 126-223 8-99 (417)
140 PLN02736 long-chain acyl-CoA s 79.3 18 0.0004 38.3 11.2 101 146-251 77-180 (651)
141 PRK06187 long-chain-fatty-acid 74.5 23 0.0005 36.1 10.1 86 148-234 32-120 (521)
142 PRK09274 peptide synthase; Pro 74.2 18 0.00039 37.4 9.3 98 127-225 20-121 (552)
143 KOG1177 Long chain fatty acid 72.2 16 0.00034 36.2 7.3 108 145-253 75-199 (596)
144 PLN03052 acetate--CoA ligase; 71.6 25 0.00054 37.9 9.7 99 126-226 188-289 (728)
145 PRK04319 acetyl-CoA synthetase 70.9 28 0.0006 36.2 9.8 85 146-231 72-159 (570)
146 PRK07656 long-chain-fatty-acid 70.9 29 0.00063 35.3 9.8 86 147-233 30-118 (513)
147 PRK06839 acyl-CoA synthetase; 69.8 27 0.00058 35.4 9.3 97 126-232 15-115 (496)
148 PTZ00237 acetyl-CoA synthetase 69.8 17 0.00036 38.6 7.9 95 127-225 75-172 (647)
149 PRK08316 acyl-CoA synthetase; 69.7 21 0.00046 36.4 8.6 86 146-232 35-123 (523)
150 PTZ00342 acyl-CoA synthetase; 69.3 38 0.00081 36.6 10.4 117 127-252 75-208 (746)
151 PLN03102 acyl-activating enzym 69.1 20 0.00042 37.5 8.2 84 147-231 39-125 (579)
152 PRK02261 methylaspartate mutas 69.0 23 0.0005 28.8 6.8 46 180-225 16-62 (137)
153 PLN02387 long-chain-fatty-acid 68.4 24 0.00052 37.9 8.8 102 146-252 105-209 (696)
154 PLN02246 4-coumarate--CoA liga 68.4 26 0.00056 36.1 8.9 97 127-231 37-136 (537)
155 PRK06334 long chain fatty acid 67.8 26 0.00056 36.2 8.7 83 148-231 46-128 (539)
156 PLN02654 acetate-CoA ligase 67.5 20 0.00044 38.1 8.0 97 126-226 102-201 (666)
157 PRK03584 acetoacetyl-CoA synth 67.5 32 0.00068 36.6 9.5 96 126-226 97-195 (655)
158 TIGR02316 propion_prpE propion 67.3 21 0.00045 37.7 8.0 96 126-225 65-163 (628)
159 PRK00174 acetyl-CoA synthetase 67.3 29 0.00063 36.7 9.1 97 126-226 80-179 (637)
160 KOG1176 Acyl-CoA synthetase [L 66.4 25 0.00054 36.1 7.9 89 145-234 43-136 (537)
161 TIGR02188 Ac_CoA_lig_AcsA acet 65.8 22 0.00048 37.5 7.9 97 126-226 70-169 (625)
162 PRK13295 cyclohexanecarboxylat 65.5 22 0.00048 36.7 7.7 96 127-226 38-136 (547)
163 PRK08008 caiC putative crotono 64.3 44 0.00096 34.1 9.6 101 126-231 20-123 (517)
164 TIGR01217 ac_ac_CoA_syn acetoa 63.9 39 0.00085 35.9 9.3 95 127-226 98-195 (652)
165 PRK05857 acyl-CoA synthetase; 63.8 29 0.00063 35.8 8.2 94 126-227 27-123 (540)
166 PRK07788 acyl-CoA synthetase; 63.4 25 0.00054 36.3 7.6 85 147-232 74-161 (549)
167 TIGR01733 AA-adenyl-dom amino 63.1 20 0.00042 35.2 6.5 68 164-232 20-87 (408)
168 cd02070 corrinoid_protein_B12- 63.1 74 0.0016 27.8 9.4 86 171-258 84-178 (201)
169 PRK13388 acyl-CoA synthetase; 62.8 42 0.00091 34.6 9.2 84 147-231 26-113 (540)
170 PRK08315 AMP-binding domain pr 62.4 31 0.00066 35.7 8.1 92 127-226 30-124 (559)
171 TIGR02370 pyl_corrinoid methyl 62.2 91 0.002 27.2 9.7 86 171-258 86-180 (197)
172 PRK05677 long-chain-fatty-acid 62.1 35 0.00076 35.4 8.5 82 147-229 49-134 (562)
173 PLN02614 long-chain acyl-CoA s 62.0 57 0.0012 34.8 10.1 86 146-232 78-166 (666)
174 PRK07798 acyl-CoA synthetase; 62.0 42 0.00091 34.3 9.0 85 147-232 28-115 (533)
175 TIGR03098 ligase_PEP_1 acyl-Co 61.2 36 0.00079 34.6 8.3 86 147-233 25-113 (515)
176 PRK10524 prpE propionyl-CoA sy 60.5 33 0.00072 36.2 8.0 96 126-225 66-164 (629)
177 PRK08314 long-chain-fatty-acid 60.4 27 0.00059 36.0 7.3 85 147-232 35-123 (546)
178 PRK06155 crotonobetaine/carnit 58.9 33 0.00072 35.4 7.5 86 147-233 46-134 (542)
179 PRK07514 malonyl-CoA synthase; 58.4 33 0.00071 34.9 7.4 85 146-231 27-114 (504)
180 PLN02330 4-coumarate--CoA liga 58.1 36 0.00077 35.2 7.6 97 127-231 42-141 (546)
181 PLN02574 4-coumarate--CoA liga 58.0 35 0.00076 35.4 7.6 98 127-232 53-154 (560)
182 PRK05605 long-chain-fatty-acid 57.1 34 0.00074 35.5 7.4 84 147-231 57-143 (573)
183 PRK13391 acyl-CoA synthetase; 57.0 53 0.0012 33.5 8.7 98 126-231 10-110 (511)
184 TIGR03208 cyc_hxne_CoA_lg cycl 56.8 40 0.00087 34.7 7.8 96 127-226 36-134 (538)
185 PLN02861 long-chain-fatty-acid 56.6 41 0.00089 35.8 7.9 86 146-232 76-164 (660)
186 PRK12492 long-chain-fatty-acid 56.5 39 0.00084 35.1 7.6 81 147-228 49-133 (562)
187 PRK03640 O-succinylbenzoic aci 56.3 67 0.0014 32.4 9.2 95 126-230 15-112 (483)
188 PRK13383 acyl-CoA synthetase; 55.0 39 0.00083 34.6 7.3 85 147-232 60-147 (516)
189 TIGR03443 alpha_am_amid L-amin 54.8 41 0.00088 39.5 8.2 99 126-225 249-350 (1389)
190 PF09580 Spore_YhcN_YlaJ: Spor 54.3 77 0.0017 27.0 7.9 56 396-459 77-132 (177)
191 PRK05850 acyl-CoA synthetase; 54.0 1E+02 0.0022 32.1 10.3 103 126-232 14-124 (578)
192 PRK09088 acyl-CoA synthetase; 53.6 66 0.0014 32.5 8.7 92 126-225 8-102 (488)
193 PRK07529 AMP-binding domain pr 53.6 62 0.0013 34.2 8.6 97 126-225 38-137 (632)
194 PRK12583 acyl-CoA synthetase; 52.5 67 0.0015 33.1 8.6 92 127-226 32-126 (558)
195 PRK13382 acyl-CoA synthetase; 52.3 50 0.0011 34.0 7.6 82 147-229 68-152 (537)
196 PRK08751 putative long-chain f 51.5 47 0.001 34.4 7.3 95 127-231 39-137 (560)
197 PRK08279 long-chain-acyl-CoA s 51.2 53 0.0012 34.4 7.7 84 147-231 62-148 (600)
198 KOG0025 Zn2+-binding dehydroge 50.9 54 0.0012 30.3 6.3 61 2-63 158-220 (354)
199 PRK05620 long-chain-fatty-acid 50.3 84 0.0018 32.7 9.0 85 146-231 37-125 (576)
200 PLN02430 long-chain-fatty-acid 48.1 1.3E+02 0.0028 32.1 10.0 84 147-231 76-162 (660)
201 TIGR01923 menE O-succinylbenzo 48.0 47 0.001 32.9 6.5 64 162-226 17-80 (436)
202 PRK12476 putative fatty-acid-- 47.7 1.5E+02 0.0032 31.2 10.4 102 127-231 48-156 (612)
203 PRK06178 acyl-CoA synthetase; 47.2 65 0.0014 33.4 7.5 86 147-233 58-146 (567)
204 PLN02479 acetate-CoA ligase 47.0 64 0.0014 33.5 7.5 82 147-229 45-129 (567)
205 PRK07470 acyl-CoA synthetase; 46.9 67 0.0015 32.9 7.6 82 147-229 32-116 (528)
206 PRK13390 acyl-CoA synthetase; 46.8 1.1E+02 0.0024 31.0 9.1 93 126-226 10-105 (501)
207 COG0318 CaiC Acyl-CoA syntheta 46.6 1E+02 0.0022 31.8 8.7 92 127-226 25-119 (534)
208 PRK10696 tRNA 2-thiocytidine b 46.0 91 0.002 28.5 7.5 60 1-60 25-95 (258)
209 cd02071 MM_CoA_mut_B12_BD meth 46.0 1E+02 0.0022 24.3 6.9 46 180-225 12-58 (122)
210 PRK12406 long-chain-fatty-acid 45.6 61 0.0013 33.0 7.0 85 147-232 11-98 (509)
211 PRK08162 acyl-CoA synthetase; 45.5 60 0.0013 33.4 6.9 84 147-231 43-129 (545)
212 PRK08276 long-chain-fatty-acid 45.3 61 0.0013 32.9 6.9 83 148-231 12-97 (502)
213 PLN02860 o-succinylbenzoate-Co 44.4 57 0.0012 33.8 6.6 79 147-226 32-113 (563)
214 cd02069 methionine_synthase_B1 44.1 1.3E+02 0.0027 26.7 7.7 88 170-261 90-185 (213)
215 PRK12582 acyl-CoA synthetase; 42.9 56 0.0012 34.5 6.3 79 146-225 79-165 (624)
216 PRK07059 Long-chain-fatty-acid 42.8 73 0.0016 32.9 7.1 83 147-230 48-133 (557)
217 PRK07008 long-chain-fatty-acid 41.8 72 0.0016 32.9 6.8 83 147-230 39-124 (539)
218 PRK06087 short chain acyl-CoA 40.9 65 0.0014 33.2 6.4 77 147-224 49-128 (547)
219 PRK07867 acyl-CoA synthetase; 40.7 97 0.0021 31.8 7.6 84 147-231 28-115 (529)
220 PRK06164 acyl-CoA synthetase; 40.5 63 0.0014 33.2 6.2 80 147-227 35-117 (540)
221 TIGR02898 spore_YhcN_YlaJ spor 40.4 1.6E+02 0.0034 24.7 7.1 52 397-455 57-109 (158)
222 PRK07786 long-chain-fatty-acid 40.4 1.3E+02 0.0028 30.9 8.5 83 147-230 42-127 (542)
223 PRK08974 long-chain-fatty-acid 40.0 69 0.0015 33.1 6.4 82 147-229 48-133 (560)
224 COG1541 PaaK Coenzyme F390 syn 39.6 68 0.0015 31.8 5.7 61 2-63 131-193 (438)
225 PRK08633 2-acyl-glycerophospho 39.2 1.2E+02 0.0026 34.7 8.7 99 125-232 627-727 (1146)
226 TIGR02262 benz_CoA_lig benzoat 38.8 1.1E+02 0.0024 31.1 7.7 84 147-231 30-116 (508)
227 PTZ00216 acyl-CoA synthetase; 38.8 1.1E+02 0.0023 33.0 7.7 88 145-233 119-209 (700)
228 PRK05934 type III secretion sy 38.5 1.7E+02 0.0038 27.4 7.6 72 397-471 74-148 (341)
229 PRK14665 mnmA tRNA-specific 2- 38.2 1.1E+02 0.0025 29.5 7.0 60 1-60 1-68 (360)
230 COG0365 Acs Acyl-coenzyme A sy 38.0 1.2E+02 0.0026 31.2 7.3 97 128-230 25-125 (528)
231 PRK06188 acyl-CoA synthetase; 37.7 1.1E+02 0.0023 31.4 7.3 79 147-226 37-118 (524)
232 PRK06018 putative acyl-CoA syn 37.2 87 0.0019 32.2 6.6 85 146-231 38-125 (542)
233 PF02310 B12-binding: B12 bind 37.1 97 0.0021 24.1 5.5 46 178-223 11-57 (121)
234 TIGR03205 pimA dicarboxylate-- 35.1 1E+02 0.0022 31.7 6.7 78 147-225 46-126 (541)
235 PRK07769 long-chain-fatty-acid 34.2 2.9E+02 0.0063 29.1 10.1 101 127-230 35-142 (631)
236 TIGR01734 D-ala-DACP-lig D-ala 33.6 99 0.0021 31.3 6.3 80 147-227 25-107 (502)
237 PRK05852 acyl-CoA synthetase; 33.6 1.1E+02 0.0024 31.4 6.6 90 126-223 29-121 (534)
238 PRK06710 long-chain-fatty-acid 33.5 1E+02 0.0022 32.0 6.4 82 147-229 49-133 (563)
239 PRK06060 acyl-CoA synthetase; 33.4 1.2E+02 0.0027 32.5 7.2 81 148-229 31-114 (705)
240 PRK07787 acyl-CoA synthetase; 32.9 1.2E+02 0.0025 30.6 6.6 76 147-225 25-100 (471)
241 PRK08180 feruloyl-CoA synthase 32.1 1.1E+02 0.0023 32.3 6.3 94 127-225 53-154 (614)
242 KOG1180 Acyl-CoA synthetase [L 31.9 1.2E+02 0.0027 30.9 6.0 86 162-252 107-193 (678)
243 TIGR02155 PA_CoA_ligase phenyl 31.5 1.2E+02 0.0025 30.1 6.2 60 2-62 116-177 (422)
244 TIGR01501 MthylAspMutase methy 30.8 2.7E+02 0.0059 22.5 7.0 78 180-260 14-99 (134)
245 KOG1252 Cystathionine beta-syn 29.9 2.3E+02 0.0049 27.0 7.1 61 2-62 100-160 (362)
246 PRK04813 D-alanine--poly(phosp 29.8 1.2E+02 0.0026 30.6 6.2 79 147-226 27-108 (503)
247 PRK06702 O-acetylhomoserine am 29.2 2.1E+02 0.0046 28.6 7.4 32 26-58 122-153 (432)
248 PRK09192 acyl-CoA synthetase; 28.7 2E+02 0.0043 29.9 7.7 87 145-232 47-143 (579)
249 COG1167 ARO8 Transcriptional r 28.5 1.2E+02 0.0027 30.5 5.7 60 2-62 176-236 (459)
250 PRK09029 O-succinylbenzoic aci 28.4 1.6E+02 0.0035 29.4 6.7 79 147-226 28-109 (458)
251 TIGR02544 III_secr_YscJ type I 28.2 3.8E+02 0.0083 23.3 7.9 72 395-470 108-185 (193)
252 PRK14664 tRNA-specific 2-thiou 26.1 2.5E+02 0.0055 27.2 7.1 60 1-60 1-63 (362)
253 cd02067 B12-binding B12 bindin 25.9 3.1E+02 0.0068 21.2 6.7 39 23-61 21-59 (119)
254 KOG1175 Acyl-CoA synthetase [L 25.7 2.9E+02 0.0062 29.1 7.7 97 127-227 79-178 (626)
255 PRK08043 bifunctional acyl-[ac 25.6 1.5E+02 0.0033 31.9 6.2 82 147-229 231-314 (718)
256 PRK08308 acyl-CoA synthetase; 25.5 2E+02 0.0043 28.3 6.7 77 148-225 9-87 (414)
257 PRK15400 lysine decarboxylase 25.4 2.4E+02 0.0052 30.2 7.2 61 2-65 232-311 (714)
258 PRK07445 O-succinylbenzoic aci 25.0 1.8E+02 0.0039 29.1 6.3 74 151-225 23-100 (452)
259 PLN02565 cysteine synthase 24.7 2.8E+02 0.0061 26.4 7.2 59 2-60 63-121 (322)
260 cd02067 B12-binding B12 bindin 24.4 2E+02 0.0043 22.4 5.2 48 179-226 11-59 (119)
261 TIGR02275 DHB_AMP_lig 2,3-dihy 24.3 1.9E+02 0.004 29.6 6.4 79 147-226 48-129 (527)
262 cd00615 Orn_deC_like Ornithine 24.3 3.2E+02 0.0069 25.4 7.4 55 2-59 96-161 (294)
263 COG0399 WecE Predicted pyridox 24.3 2.1E+02 0.0046 27.9 6.2 54 2-59 71-129 (374)
264 TIGR02379 ECA_wecE TDP-4-keto- 24.0 1.7E+02 0.0036 28.6 5.6 53 2-58 68-125 (376)
265 PF01514 YscJ_FliF: Secretory 23.8 2.7E+02 0.0058 24.5 6.3 73 395-471 116-194 (206)
266 COG0031 CysK Cysteine synthase 23.7 3.1E+02 0.0067 25.8 6.9 58 2-60 59-116 (300)
267 TIGR00936 ahcY adenosylhomocys 23.5 2.8E+02 0.0061 27.4 6.9 57 4-60 31-89 (406)
268 PRK07868 acyl-CoA synthetase; 23.4 3.7E+02 0.0081 30.4 8.9 81 147-231 472-555 (994)
269 TIGR02080 O_succ_thio_ly O-suc 23.3 2.9E+02 0.0064 27.0 7.2 13 441-453 367-379 (382)
270 PRK15348 type III secretion sy 23.2 5.4E+02 0.012 23.5 8.1 73 396-470 109-184 (249)
271 TIGR03335 F390_ftsA coenzyme F 23.0 2.2E+02 0.0047 28.6 6.4 57 2-61 127-185 (445)
272 COG1167 ARO8 Transcriptional r 22.9 1.4E+02 0.0031 30.1 5.0 59 166-228 176-237 (459)
273 PRK08045 cystathionine gamma-s 22.9 3.1E+02 0.0068 26.8 7.3 10 3-12 89-98 (386)
274 PRK10252 entF enterobactin syn 22.5 1.8E+02 0.0039 33.9 6.5 84 147-231 483-569 (1296)
275 PF07210 DUF1416: Protein of u 22.1 2.7E+02 0.0059 20.3 4.7 20 298-317 16-35 (85)
276 PRK06145 acyl-CoA synthetase; 21.9 2.5E+02 0.0053 28.4 6.7 81 147-228 27-110 (497)
277 PF05221 AdoHcyase: S-adenosyl 21.8 4.1E+02 0.0089 24.4 7.1 56 4-59 42-99 (268)
278 PRK11706 TDP-4-oxo-6-deoxy-D-g 21.8 2.8E+02 0.006 27.0 6.7 53 2-58 68-125 (375)
279 PRK04870 histidinol-phosphate 21.3 3.4E+02 0.0074 26.0 7.2 11 3-13 103-113 (356)
280 PRK11761 cysM cysteine synthas 21.2 3.3E+02 0.0071 25.5 6.8 58 2-60 60-117 (296)
281 PF01436 NHL: NHL repeat; Int 21.1 1.6E+02 0.0035 16.0 3.2 18 371-388 9-26 (28)
282 PLN02556 cysteine synthase/L-3 20.7 3.1E+02 0.0068 26.7 6.7 59 2-60 107-165 (368)
283 PF01276 OKR_DC_1: Orn/Lys/Arg 20.4 2.1E+02 0.0045 28.4 5.3 60 2-64 103-181 (417)
284 PRK08574 cystathionine gamma-s 20.4 3.1E+02 0.0068 26.8 6.7 18 22-39 85-102 (385)
285 PF07722 Peptidase_C26: Peptid 20.1 1.7E+02 0.0037 25.9 4.4 30 23-52 31-60 (217)
286 TIGR00649 MG423 conserved hypo 20.1 3.3E+02 0.0071 27.1 6.9 60 2-61 316-385 (422)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-75 Score=575.25 Aligned_cols=464 Identities=27% Similarity=0.288 Sum_probs=393.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++||++++++.++||+++|++..++||.+.+.++..++++++++.++++.... +...........
T Consensus 69 i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~ 142 (537)
T KOG1176|consen 69 IKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLAL 142 (537)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCC
Confidence 68899999999999999999999999999999999999999999999999999999998543 333333433344
Q ss_pred ceEEecccCCCCCCCCCcCCCC-HHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
..+++................+ +.++...... .. ....+.+|++.++|||||||.||||++||+++.......
T Consensus 143 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~ 216 (537)
T KOG1176|consen 143 KIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP----DG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSI 216 (537)
T ss_pred ceEEEecccCccccccccccccchhhccccCCC----cc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHh
Confidence 5555543312111111112222 3333332221 11 456678999999999999999999999999999998877
Q ss_pred ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
.....+...++.++.+|++|.+|+..++.+++.|++.++....++++.+++.|++|++|++.++|+.+..|++.......
T Consensus 217 ~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~ 296 (537)
T KOG1176|consen 217 KIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKY 296 (537)
T ss_pred hhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcc
Confidence 77777888999999999999999999777666666666666678999999999999999999999999999999877788
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
++++++.+.++|+++++++.+.++++++...+.+.||+||+++....+........+++|.++++++.++.+++|+.+++
T Consensus 297 ~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~ 376 (537)
T KOG1176|consen 297 DLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGP 376 (537)
T ss_pred cCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCC
Confidence 99999999999999999999999999987889999999999976666655444678999999999999999999999999
Q ss_pred CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHH
Q 010854 321 DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 399 (499)
Q Consensus 321 g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~i 399 (499)
++. ||||+ ++..+.+ +++|++.+...+ ++++||||||+|++|+||+|||.+|.||+||.+|++|+|.||
T Consensus 377 ~~~--GEI~vrg~~imkG--Y~~NpeaT~~~~------~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~Ei 446 (537)
T KOG1176|consen 377 NQT--GEICVRGPQVMKG--YLKNPEATKEAF------DDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEI 446 (537)
T ss_pred CCc--eEEEEECcccchh--hcCChHHHHhhc------ccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHH
Confidence 995 99999 7777764 444555444444 455999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcH
Q 010854 400 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 479 (499)
Q Consensus 400 E~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GK 479 (499)
|++|. .||.|.|++|++.+|+.+| +.++|+||.+++...++++++++++ ++|+.|+.|..++|+++||+|++||
T Consensus 447 E~vL~-~hP~V~eaaVvgipDe~~G-e~p~A~VV~k~g~~lte~di~~~v~----k~l~~y~~~~~V~Fvd~lPKs~~GK 520 (537)
T KOG1176|consen 447 EAVLL-THPDVLEAAVVGIPDEVWG-ETPAAFVVLKKGSTLTEKDIIEYVR----KKLPAYKLPGGVVFVDELPKTPNGK 520 (537)
T ss_pred HHHHH-hCCCccEEEEEcccccccC-CcceEEEEecCCCcCCHHHHHHHHH----hhCChhhccCeEEEeccCCCCCcch
Confidence 99997 9999999999999999999 9999999999988889888888754 6788899999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 010854 480 LLRRVLRDQIKHEL 493 (499)
Q Consensus 480 v~r~~l~~~~~~~~ 493 (499)
|+|+.||+.+.+..
T Consensus 521 i~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 521 ILRRKLRDIAKKLG 534 (537)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998754
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-74 Score=528.99 Aligned_cols=468 Identities=21% Similarity=0.233 Sum_probs=397.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc---
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--- 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--- 78 (499)
|++||||+++.||+.+|+.++|||+++|.+.+++||.+..++++..|++.+++++|+.+.+-.. .+-..+.++.++
T Consensus 99 L~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~-ny~~~l~~icPEv~~ 177 (596)
T KOG1177|consen 99 LKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQ-NYYETLLEICPEVMR 177 (596)
T ss_pred CCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhc-hHHHHHHHhhHHhhc
Confidence 7899999999999999999999999999999999999999999999999999999998865211 001111112111
Q ss_pred ----------CCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCC-CCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010854 79 ----------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN-YYSPVYNPVDAVVNILFSSGTTGEPKAIP 147 (499)
Q Consensus 79 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~ 147 (499)
.+....++..+++. .-++.+.++|+++.++..+... ........+||++.|.|||||||.|||+.
T Consensus 178 ~~~G~lkS~~lp~lthvi~~~ed~----~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgat 253 (596)
T KOG1177|consen 178 GDPGQLKSELLPELTHVILADEDH----PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGAT 253 (596)
T ss_pred CCCccccccccccceEEEecCCCC----cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCccee
Confidence 23444444444332 3578899999998876521111 12234567899999999999999999999
Q ss_pred ecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH
Q 010854 148 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
+||.+++++.......+++...++++...|++|.+|.+. ++.++..|++++++.+.+++...+++|.+++||.++++|+
T Consensus 254 LsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPt 333 (596)
T KOG1177|consen 254 LSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPT 333 (596)
T ss_pred eehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChH
Confidence 999999999999888999999999999999999999765 9999999999999988999999999999999999999999
Q ss_pred HHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCC--CccccccccCC
Q 010854 227 LVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP--QAFGAFSTATM 304 (499)
Q Consensus 227 ~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~--~~~~~~g~~~~ 304 (499)
|+..|++...+...+++++|.++.+|+++++++.+.+.....-..+...||+||++...+.....++ ....++|+.++
T Consensus 334 M~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~ 413 (596)
T KOG1177|consen 334 MFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMD 413 (596)
T ss_pred HHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccc
Confidence 9999999999999999999999999999999999999877655668899999999977666555433 45689999999
Q ss_pred CceEEEECCCCCCCCCCCCcceeeEe-cc----cccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEE
Q 010854 305 TAGLVILDECGVPYPDDQPCVGEVGL-FP----LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIV 379 (499)
Q Consensus 305 ~~~~~i~d~~g~~~~~g~~~~Gei~v-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~ 379 (499)
+.+..|+|..|..++.+.+ ||+++ +. +||+..+. ....+..++||+|||++.+|++|++++
T Consensus 414 h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tMl~Ywg~~~k------------T~eti~~drW~~TGDi~~m~enG~i~i 479 (596)
T KOG1177|consen 414 HYEAAIVDKDGSEVPLGTK--GELLIRGYSTMLGYWGEEEK------------TKETIGNDRWYDTGDIAVMDENGTIEI 479 (596)
T ss_pred ccccccccCCCCccccCCC--ceEEEEechhheeecCCccc------------chhhcccccceecCceEEEcCCCcEEE
Confidence 9999999999999999997 99999 43 34442211 133456789999999999999999999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCC--CHHHHHHHHHHHHHhhc
Q 010854 380 QGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS--QPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 380 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~~~~~~~l 457 (499)
+||.+|+|+.+|++|+|.|||+.|. .||.|.++.|++++|+..| +.++|+|-++.+... +.++|+.+ ++.+|
T Consensus 480 VGRskdmI~rGGENVyP~ElE~fL~-~hp~V~~a~VVGV~D~R~G-E~VCA~vRLqe~~e~~~t~E~lKa~----Ck~kl 553 (596)
T KOG1177|consen 480 VGRSKDMIIRGGENVYPTELEDFLN-KHPLVKEAHVVGVPDERLG-EEVCACVRLQEGAEGKTTAETLKAM----CKGKL 553 (596)
T ss_pred EEcccCeEEeCCcccChHHHHHHHh-hCCCeeeEEEEccCCCccc-ceEEEEEEeeccccccccHHHHHHH----Hhccc
Confidence 9999999999999999999999997 9999999999999999999 999999999886542 55555554 66789
Q ss_pred CCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhh
Q 010854 458 NPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 458 ~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
+.|++|++|++++++|+|.+|||+|.++|++++.+++
T Consensus 554 aHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~~l~ 590 (596)
T KOG1177|consen 554 AHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKGHLG 590 (596)
T ss_pred ccccCCcEEEEeccCcccccccchhHHHHHHHHhhcc
Confidence 9999999999999999999999999999999998775
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.5e-72 Score=550.41 Aligned_cols=454 Identities=27% Similarity=0.403 Sum_probs=383.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCce
Q 010854 4 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA 83 (499)
Q Consensus 4 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (499)
+||||+|+||+.++.++++|||+++|++++|+.+..+++.++..++++++|++|+.+...+..+..+........... .
T Consensus 64 kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~ 142 (528)
T COG0365 64 KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-V 142 (528)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-e
Confidence 899999999999999999999999999999999999999999999999999999988776655554444443333333 2
Q ss_pred EEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc-e
Q 010854 84 IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-A 162 (499)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~-~ 162 (499)
++... .+ ..|.++...... .......+.+|+++++|||||||.||||+++|..+........ .
T Consensus 143 iv~~r----------~~-~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~ 206 (528)
T COG0365 143 VVVPR----------LG-LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKF 206 (528)
T ss_pred EEecc----------cc-ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHH
Confidence 22211 11 677777765432 2233347889999999999999999999999997766665444 4
Q ss_pred eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCC--hhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 163 HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 163 ~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
.+.+.++|++.+..++.|.+|... +++++.+|+++++.+.... ++.+++.|+++++|.+++.|+.++.|++....++
T Consensus 207 ~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~ 286 (528)
T COG0365 207 HGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEP 286 (528)
T ss_pred hhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCccc
Confidence 577889999999999999999998 9999999999999875543 8899999999999999999999999999987677
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
.++++||.+.+.||+++++..+++.+.+ ++.+.+.||+||+++++....+ +...++.|.|+||+++.++|++|++++
T Consensus 287 ~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~ 363 (528)
T COG0365 287 YDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVP 363 (528)
T ss_pred ccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCC
Confidence 8999999999999999999999999887 6999999999999966655544 444555599999999999998899999
Q ss_pred CCCCcceeeEecccccccccc-cccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGLFPLYLGASDR-LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
+++ |+|++....++.... ..+++.....|.+ . ||.|||.+++|+||+++|.||.||+||+.|++|.|.|
T Consensus 364 ~~~---G~Lvi~~~~p~~~~~~w~d~er~~~~y~~------~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~E 433 (528)
T COG0365 364 PGV---GELVVRLPWPGMALTYWNDPERYKEAYFG------R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLE 433 (528)
T ss_pred CCc---eEEEEeCCCchhhhhhhCCHHHHHHHHhh------c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHH
Confidence 998 999994332222111 1122222222221 1 8899999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||++|. +||.|.|++|++.+|+..| +.+++||+++++...+ +|.+.+++++++.+.++..|++|.|+++||+|.||
T Consensus 434 vE~~l~-~hP~VaEaAvVg~pd~~kg-~~v~afVvL~~g~~~~--~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sG 509 (528)
T COG0365 434 IESVLL-AHPAVAEAAVVGVPDPGKG-QIVLAFVVLAAGVEPN--ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASG 509 (528)
T ss_pred HHHHHH-hCcceeeeEEEeccCCCCC-cEEEEEEEecCCCChH--HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcc
Confidence 999997 9999999999999999888 8899999999998766 99999999998888889999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 010854 479 KLLRRVLRDQIKH 491 (499)
Q Consensus 479 Kv~r~~l~~~~~~ 491 (499)
||.|+.||+.+.+
T Consensus 510 KI~R~~lr~~~~~ 522 (528)
T COG0365 510 KIQRRLLRKILHK 522 (528)
T ss_pred cHHHHHHHHHHhh
Confidence 9999999998884
No 4
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=9.2e-71 Score=576.28 Aligned_cols=497 Identities=67% Similarity=1.114 Sum_probs=403.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++||++++++++|||+++|++++|+++.++++++..++++++++++|+++.+.+..+..+.+..+......
T Consensus 230 v~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~ 309 (728)
T PLN03052 230 FEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAP 309 (728)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCC
Confidence 78999999999999999999999999999999999999999999999999999999988665443444444443333333
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+++................+|++++.............+.....+++++|+|||||||.||||+++|.+++..+....
T Consensus 310 ~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~ 389 (728)
T PLN03052 310 KAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAW 389 (728)
T ss_pred cEEEEeCCCCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHH
Confidence 34444322111111111234567777654321000111122223568999999999999999999999998877665555
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..++++++|++++..+++|.++...++.+++.|+++++.++......+++.++++++|++.++|++++.|.+.....+.+
T Consensus 390 ~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~d 469 (728)
T PLN03052 390 AHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLD 469 (728)
T ss_pred HhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCC
Confidence 55788999999999999999998778899999999999976556678999999999999999999999998876556778
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDD 321 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g 321 (499)
+++||.+.++||+++++...++...+....+.+.||+||+++.+...........+++|.|.+|++++|+|++|++++.|
T Consensus 470 lssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g 549 (728)
T PLN03052 470 WSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDD 549 (728)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCC
Confidence 99999999999999999888887766556799999999998755444333444567899999999999999999999988
Q ss_pred CCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHH
Q 010854 322 QPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 401 (499)
Q Consensus 322 ~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~ 401 (499)
+.++|||++.+.+++....+.+......||.+.+..++++||+|||++++|++|+++++||.||+||++|.+|+|.|||+
T Consensus 550 ~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~ 629 (728)
T PLN03052 550 APCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIER 629 (728)
T ss_pred CCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHH
Confidence 64469999977666654444555555667776776777789999999999999999999999999999999999999999
Q ss_pred HHhhcCccceeeeEEEeCCCCCCceEEEEEEEec--CCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcH
Q 010854 402 VCDQADESILETAAISVSPAGGGPEVLVIFVVLK--KGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 479 (499)
Q Consensus 402 ~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GK 479 (499)
++...||+|.+++|++++++..|.+++++||++. ++...+.++|++++++++.++|++++.|..|+++++||+|++||
T Consensus 630 ~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGK 709 (728)
T PLN03052 630 VCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNK 709 (728)
T ss_pred HHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchH
Confidence 9954799999999999998766558899999987 55556678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCC
Q 010854 480 LLRRVLRDQIKHELSVRSRI 499 (499)
Q Consensus 480 v~r~~l~~~~~~~~~~~~~~ 499 (499)
++|+.|++.+.+... +|||
T Consensus 710 i~Rr~Lr~~~~~~~~-~~~~ 728 (728)
T PLN03052 710 VMRRVLRQQLAQELS-RSKL 728 (728)
T ss_pred HHHHHHHHHHHhhhh-ccCC
Confidence 999999999988776 7775
No 5
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.3e-69 Score=545.47 Aligned_cols=488 Identities=71% Similarity=1.171 Sum_probs=371.1
Q ss_pred cCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCceEEecccCC
Q 010854 12 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 91 (499)
Q Consensus 12 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
+||++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.........+.+..+........+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 68999999999999999999999999999999999999999999999764211101112222222212222233221111
Q ss_pred CCCCCCCcCCCCHHHHhcccCCC--CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcceeccCcCC
Q 010854 92 DVGIPLREQDLSWKDFLSSVDYH--PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 169 (499)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~~~~~~~ 169 (499)
...........++.++....... .......+....++++++|+|||||||.||||+++|+++...+......++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 10000011234566665321110 0001111122356899999999999999999999999987766555555678899
Q ss_pred cEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCC--CCcccccceeE
Q 010854 170 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 247 (499)
Q Consensus 170 ~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~l~~ 247 (499)
|++++.+|++|.+++..++.+++.|+++++.+..+++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999987788899999999998755667899999999999999999999999987643 34557889999
Q ss_pred EEeecCCCChhhHHHHHhhc-ccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCCCCcce
Q 010854 248 FASTGETSNVDDDLWLSSKA-WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 326 (499)
Q Consensus 248 i~~~G~~l~~~~~~~~~~~~-~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~G 326 (499)
++++|++++++..+++++.. .+..+++.||+||++..+...........+++|.|.++++++|+|++|++++.|+.++|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 99999999998888776522 23779999999998654333222223345789999999999999999999998853369
Q ss_pred eeEecccccccccccccccccchhhcCCCCC--CCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHh
Q 010854 327 EVGLFPLYLGASDRLLNADHEEVYFRGMPMY--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 404 (499)
Q Consensus 327 ei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~ 404 (499)
||++...+.+....|.+.+.+..++.+.+.. ++..||+|||+|++|+||+|+++||.||+||++|++|+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999433332111222333333344444333 45668999999999999999999999999999999999999999996
Q ss_pred hcCccceeeeEEEeCCCCCCceEEEEEE---EecCCC-CCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHH
Q 010854 405 QADESILETAAISVSPAGGGPEVLVIFV---VLKKGF-TSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 480 (499)
Q Consensus 405 ~~~~~v~~~~v~~~~~~~~~~~~~~~~v---~~~~~~-~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv 480 (499)
+.||+|.+++|++++++..+.+.++++| +++++. ..+.+++++++++++.++|++|++|..|+++++||+|++||+
T Consensus 401 ~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi 480 (499)
T PLN03051 401 RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNKL 480 (499)
T ss_pred hcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCccH
Confidence 3499999999999999887746788998 777664 456788999999999889998888878999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCC
Q 010854 481 LRRVLRDQIKHELSVRSRI 499 (499)
Q Consensus 481 ~r~~l~~~~~~~~~~~~~~ 499 (499)
+|++|++.+.++++.+|||
T Consensus 481 ~r~~L~~~~~~~~~~~~~~ 499 (499)
T PLN03051 481 LRRVLRDQLKKELSGRSKL 499 (499)
T ss_pred HHHHHHHHHHHhhccccCC
Confidence 9999999999999999986
No 6
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.5e-67 Score=534.22 Aligned_cols=457 Identities=25% Similarity=0.266 Sum_probs=373.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
|++||+|+|+++|++++++++|||+++|++++|+||.++.+++.+++++++++.+++++.+. ..........+.
T Consensus 60 v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 133 (534)
T COG0318 60 VKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPV 133 (534)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCc
Confidence 67999999999999999999999999999999999999999999999999999999987521 122222222222
Q ss_pred ceEEecccCCCCCCCCCcCC-CCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 KAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
...+........ .. .++.++...... ........+++|+++++|||||||.||||++||+++..+....
T Consensus 134 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~ 203 (534)
T COG0318 134 VLVVLLVGDADD------RLPITLEALAAEGPG----PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGI 203 (534)
T ss_pred ceEEEecccccc------cccccHHHHhhccCC----cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHH
Confidence 222222111110 00 355665333221 1111112678999999999999999999999999999998888
Q ss_pred ceecc--CcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCC-CCChhHHHHHHHHhCCeEEecchHHHHHHHccCC
Q 010854 161 WAHID--LKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 236 (499)
Q Consensus 161 ~~~~~--~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 236 (499)
...+. +++.|++++++|++|.+|+.. ++..++.|+++++.++ .++++.++..+.++++|++.++|+++..|+....
T Consensus 204 ~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~ 283 (534)
T COG0318 204 AAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPE 283 (534)
T ss_pred HHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCc
Confidence 88887 899999999999999999997 6666999999998874 5788999999999999999999999999999988
Q ss_pred CCcccccc-eeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCC
Q 010854 237 LEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDEC 314 (499)
Q Consensus 237 ~~~~~l~~-l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~ 314 (499)
....++++ +|.+++||+++++++.+.+++++....+++.||+||++..+....... ....+++|.|.|+++++|+|++
T Consensus 284 ~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~ 363 (534)
T COG0318 284 KDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPD 363 (534)
T ss_pred cCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCC
Confidence 77766666 999999999999999999999986568999999999997666665555 2356777999999999999955
Q ss_pred CC-CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCce
Q 010854 315 GV-PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGI 392 (499)
Q Consensus 315 g~-~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~ 392 (499)
+. +++ |+ +|||++ ++..+.+ ++.+++.+...|. +++||+|||+|++|++|+++|+||.||+|+++|+
T Consensus 364 ~~~~~p-g~--vGei~irgp~v~~G--Y~~~pe~t~~~f~------~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ 432 (534)
T COG0318 364 GGEVLP-GE--VGEIWVRGPNVMKG--YWNRPEATAEAFD------EDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGE 432 (534)
T ss_pred CCccCC-CC--ceEEEEECchhhhh--hcCChHHHHHhhc------cCCeeeecceEEEcCCccEEEEeccceEEEeCCe
Confidence 54 555 76 699999 6666654 2223333333332 2689999999999999999999999999999999
Q ss_pred eechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCC--CCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 393 KTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--TSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 393 ~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
+|+|.|||+++. .||.|.+++|++++++.+| +.++++++++++. ..+.+++.++++ +.++.|+.|+++++++
T Consensus 433 ni~p~eiE~~l~-~~~~V~~aavvgvpd~~~G-e~~~a~v~~~~~~~~~~~~~~i~~~~~----~~l~~~~~P~~v~~v~ 506 (534)
T COG0318 433 NIYPEEIEAVLA-EHPAVAEAAVVGVPDERWG-ERVVAVVVLKPGGDAELTAEELRAFLR----KRLALYKVPRIVVFVD 506 (534)
T ss_pred EECHHHHHHHHH-hCCCcceEEEEeCCCCccC-ceEEEEEEEcCCCCCCCCHHHHHHHHH----hhhhcccCCeEEEEeC
Confidence 999999999996 9999999999999999999 9999999998763 335666666644 5889999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHh
Q 010854 471 EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 471 ~iP~t~~GKv~r~~l~~~~~~ 491 (499)
+||+|++||++|+.|++.+.+
T Consensus 507 ~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 507 ELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CCCCCCchhhhHHHHHHHHHh
Confidence 999999999999999999987
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.8e-66 Score=536.27 Aligned_cols=479 Identities=20% Similarity=0.272 Sum_probs=368.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccc---hhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL---YSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~ 78 (499)
|++||+|++++||++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+..+. +......
T Consensus 114 v~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 193 (647)
T PTZ00237 114 ISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIEL 193 (647)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999998643322211111 1112111
Q ss_pred C---CCceEEecccCC--CC------CCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010854 79 A---PLKAIVLPAIGN--DV------GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIP 147 (499)
Q Consensus 79 ~---~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~ 147 (499)
. ....+++..... .. .....+....|++++..................++++++|+|||||||.||||+
T Consensus 194 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~ 273 (647)
T PTZ00237 194 STFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVV 273 (647)
T ss_pred ccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEE
Confidence 1 112222211110 00 001112335577665432110011112223456799999999999999999999
Q ss_pred ecchhhHHHhh-hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCC-C----hhHHHHHHHHhCCeEE
Q 010854 148 WTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP-L----ERSFGKFVQDAGVTVL 221 (499)
Q Consensus 148 ~s~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~-~----~~~~~~~i~~~~~t~l 221 (499)
++|.+.+.... .....+....++++++..|++|..+...++.+++.|+++++.+... . +..+++.|+++++|++
T Consensus 274 ~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~ 353 (647)
T PTZ00237 274 RSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHT 353 (647)
T ss_pred EcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEE
Confidence 99998443333 2233456777899999999999987767889999999999876421 1 5789999999999999
Q ss_pred ecchHHHHHHHccCC-----CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcc
Q 010854 222 GTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 296 (499)
Q Consensus 222 ~~~P~~l~~l~~~~~-----~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~ 296 (499)
.++|++++.|++... ....++++||.++++|+++++++.+++.+.+ ++.+++.||+||++..+...........
T Consensus 354 ~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~~~~~~~ 432 (647)
T PTZ00237 354 LTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYGHINIPY 432 (647)
T ss_pred EeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCCCCCCCC
Confidence 999999999987542 2345789999999999999999999998776 6889999999999865443332222334
Q ss_pred ccccccCCCceEEEECCCCCCCCCCCCcceeeEec-c---cccccccccccccccchhhcCCCCCCCccccccCceeEee
Q 010854 297 GAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-P---LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 372 (499)
Q Consensus 297 ~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~ 372 (499)
+++|.|+|+++++|+|++|++++.|+ .|||++. + ..+.+ ++.+++.+..+|. +.++||+|||+|++|
T Consensus 433 ~s~G~p~~g~~~~i~d~~g~~~~~ge--~GEl~v~~p~~p~~~~g--y~~~~~~~~~~f~-----~~~g~~~TGDlg~~d 503 (647)
T PTZ00237 433 NATGVPSIFIKPSILSEDGKELNVNE--IGEVAFKLPMPPSFATT--FYKNDEKFKQLFS-----KFPGYYNSGDLGFKD 503 (647)
T ss_pred CCCccCcCCceEEEECCCCCCCCCCC--ceEEEEeccCCchhhCc--eeCCHHHHHHHHh-----CCCCEEECCcEEEEC
Confidence 78999999999999999999999998 5999994 3 22222 2333333333442 235799999999999
Q ss_pred cCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCC---CCCHHHHHHHH
Q 010854 373 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF---TSQPDKLKMIF 449 (499)
Q Consensus 373 ~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~l~~~~ 449 (499)
++|+++++||.||+||++|++|+|.|||++|. .||.|.+++|++++++..+ +.++++|++.++. ..+.+++.+.+
T Consensus 504 ~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaavvg~~~~~~g-~~~~a~Vv~~~~~~~~~~~~~~l~~~i 581 (647)
T PTZ00237 504 ENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCSIGIYDPDCY-NVPIGLLVLKQDQSNQSIDLNKLKNEI 581 (647)
T ss_pred CCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEEEeeEcCCCC-CEEEEEEEeccCccccCCCHHHHHHHH
Confidence 99999999999999999999999999999997 8999999999999999888 8999999988532 33556788888
Q ss_pred HHHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 450 SKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 450 ~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++.++++|++|+.|+.|+++++||+|++||++|+.|++++.++
T Consensus 582 ~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 582 NNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred HHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC
Confidence 8889999999999999999999999999999999999998654
No 8
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.4e-64 Score=526.80 Aligned_cols=476 Identities=23% Similarity=0.317 Sum_probs=370.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchh---hhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS---KVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~---~~~~~ 78 (499)
+++||+|++++||++++++++|||+++|++++|+++.++++++..++++++++++|+++...+..+...... .....
T Consensus 142 v~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~ 221 (666)
T PLN02654 142 VKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDE 221 (666)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHh
Confidence 789999999999999999999999999999999999999999999999999999999876543322211111 11111
Q ss_pred C----CCceEEecccCC------CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010854 79 A----PLKAIVLPAIGN------DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW 148 (499)
Q Consensus 79 ~----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~ 148 (499)
. .....++..... ...+. ......|+++..... ..........+|+++++|||||||.||||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~ 295 (666)
T PLN02654 222 SAKNGVSVGICLTYENQLAMKREDTKWQ-EGRDVWWQDVVPNYP-----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLH 295 (666)
T ss_pred ccccCCCccEEEEecccccccccccccc-cCCcccHHHHhhcCC-----CCCCceecCCCCceEEEecCCCCCCCceEEe
Confidence 0 000111110000 00000 011233555543211 1112233567999999999999999999999
Q ss_pred cchhhHHH-hhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEec
Q 010854 149 TQLSSIRC-TAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 149 s~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~ 223 (499)
+|.+++.. .......++++++|++++..|++|..+... ++.+++.|+++++.++. .++..+++.|+++++|++++
T Consensus 296 sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~ 375 (666)
T PLN02654 296 TTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYT 375 (666)
T ss_pred cccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEe
Confidence 99987644 344455678999999999999999999765 88999999999998642 35789999999999999999
Q ss_pred chHHHHHHHccCC--CCcccccceeEEEeecCCCChhhHHHHHhhccc--CceeccccccceeeeeecCCCC-CCCcccc
Q 010854 224 VPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGA 298 (499)
Q Consensus 224 ~P~~l~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~ 298 (499)
+|++++.|++... ..+.++++||.++++|+++++++.+++.+.+.. +.+.+.||+||+++........ .....++
T Consensus 376 ~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs 455 (666)
T PLN02654 376 APTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGS 455 (666)
T ss_pred CHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCc
Confidence 9999999988653 234678899999999999999999999887743 6799999999998755543322 2346688
Q ss_pred ccccCCCceEEEECCCCCCCCCCCCcceeeEecccccccc-cccccccccchhhcCCCCCCCccccccCceeEeecCceE
Q 010854 299 FSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGAS-DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYI 377 (499)
Q Consensus 299 ~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l 377 (499)
+|.|++|++++|+|++|++++.++ +||+++..+..+.. .++.+++.+...|- ...++||+|||+|++|++|++
T Consensus 456 ~G~p~~g~~v~i~d~~g~~~~~~~--~Gel~v~~~~p~~~~gy~~~~~~~~~~~~----~~~~g~~~TGD~~~~d~dG~l 529 (666)
T PLN02654 456 ATFPFFGVQPVIVDEKGKEIEGEC--SGYLCVKKSWPGAFRTLYGDHERYETTYF----KPFAGYYFSGDGCSRDKDGYY 529 (666)
T ss_pred cCCCCCCceEEEECCCCCCCCCCC--ceEEEEcCCCchhhhhhcCChHHHHHhhh----hcCCCEEEeCceEEECCCCcE
Confidence 999999999999999999998877 59999943212111 12222222221111 123579999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 010854 378 IVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 378 ~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l 457 (499)
+++||.||+||++|++|+|.|||++|. .||+|.+++|++++++..+ +.++++|+++++...+ +++.+.++++++++|
T Consensus 530 ~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d~~~g-e~~~a~Vvl~~~~~~~-~~l~~~l~~~~~~~L 606 (666)
T PLN02654 530 WLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEHEVKG-QGIYAFVTLVEGVPYS-EELRKSLILTVRNQI 606 (666)
T ss_pred EEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEcCCCC-eEEEEEEEECCCCCCC-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999997 9999999999999998888 9999999999875543 567778888899999
Q ss_pred CCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 458 NPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 458 ~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+.|+.|+.|+++++||+|++||++|+.|++.+.++
T Consensus 607 ~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 607 GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 641 (666)
T ss_pred CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC
Confidence 99999999999999999999999999999998764
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.5e-63 Score=517.91 Aligned_cols=475 Identities=23% Similarity=0.354 Sum_probs=366.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccch---hhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY---SKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~---~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++...+..+..+.. ......
T Consensus 105 v~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 184 (628)
T TIGR02316 105 VGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAE 184 (628)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999987543222211111 111111
Q ss_pred ---CCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 79 ---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
.....+++........ ........+.++...... .........++++++|+|||||||.||||+++|.++..
T Consensus 185 ~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~ 259 (628)
T TIGR02316 185 AQHPPPHVLLVDRGLAPMR-LIPGRDVDYAALRTQHED----AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAV 259 (628)
T ss_pred cCCCCCEEEEEeCCCCCcC-cccCccccHHHHhhcccc----CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHH
Confidence 1122233321111100 001123456665443211 11112234679999999999999999999999999764
Q ss_pred H-hhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCC---CCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 156 C-TAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 156 ~-~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
. .......++++++|++++..|++|..++.. ++.+++.|+++++.++ ..++..+++.|+++++|+++++|++++.
T Consensus 260 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 339 (628)
T TIGR02316 260 ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRV 339 (628)
T ss_pred HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHH
Confidence 4 334445578899999999999999999755 8899999999998864 2357889999999999999999999999
Q ss_pred HHccCC--CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC---CCCccccccccCCC
Q 010854 231 WRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMT 305 (499)
Q Consensus 231 l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~---~~~~~~~~g~~~~~ 305 (499)
|.+... ....++++||.++++|+++++++.+++...+ +..+++.||+||++..++..... .....+++|.|+|+
T Consensus 340 l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g 418 (628)
T TIGR02316 340 LKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYG 418 (628)
T ss_pred HHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCC
Confidence 887643 2456789999999999999999999888766 67899999999998544332221 12345788999999
Q ss_pred ceEEEECC-CCCCCCCCCCcceeeEe-ccc---ccccccccccccccch-hhcCCCCCCCccccccCceeEeecCceEEE
Q 010854 306 AGLVILDE-CGVPYPDDQPCVGEVGL-FPL---YLGASDRLLNADHEEV-YFRGMPMYKGMCLRRHGDIIKRTVGGYIIV 379 (499)
Q Consensus 306 ~~~~i~d~-~g~~~~~g~~~~Gei~v-~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~ 379 (499)
++++|+|+ +|++++.|+ .|||++ ++. ++.+ ++.+++.... ++. ..+++||+|||+|++|+||++++
T Consensus 419 ~~v~i~d~~~g~~~~~g~--~Gel~v~gp~~~g~~~~--~~~~~~~~~~~~~~----~~~~~~~~TGD~g~~d~dG~l~i 490 (628)
T TIGR02316 419 YHLRVLDEATGRPCGPNE--KGVLTVVPPLPPGCLST--VWGDDARFLKTYWS----HFKRPLYSSFDWGIRDEDGYTFI 490 (628)
T ss_pred ceEEEEECCCCCCCCCCC--cEEEEEecCCCcccccc--ccCChHHHHHhhhh----cCCCCEEECCceEEEcCCCcEEE
Confidence 99999996 899999998 599999 442 2222 1112211111 111 11357999999999999999999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCC----CHHHHHHHHHHHHHh
Q 010854 380 QGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS----QPDKLKMIFSKAIQS 455 (499)
Q Consensus 380 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~~~~~~ 455 (499)
+||.||+||++|++|+|.|||++|. .||+|.+++|++++++..+ +.++++|++.++... +.+.+.+.+++++.+
T Consensus 491 ~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~ 568 (628)
T TIGR02316 491 LGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QVAVVFAILKESDSAGDAHDPHAVETGMMDCVVR 568 (628)
T ss_pred EEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eEEEEEEEEcCCcccccccchHHHHHHHHHHHHH
Confidence 9999999999999999999999997 8999999999999998888 899999998865432 234567778888899
Q ss_pred hcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 456 KLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 456 ~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+|+.|+.|..|+++++||+|++||++|+.|++.+.+.
T Consensus 569 ~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 569 QLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred hcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999987653
No 10
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-63 Score=513.04 Aligned_cols=449 Identities=21% Similarity=0.213 Sum_probs=363.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.... .+.........
T Consensus 96 i~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 169 (549)
T PRK07788 96 VRAGDGVAVLARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGR 169 (549)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhcccccc
Confidence 679999999999999999999999999999999999999999999999999999999875421 11111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...+........ .......+++++...... .+.....++.++++|||||||.||+|+++|+++...+....
T Consensus 170 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 240 (549)
T PRK07788 170 LRAWGGNPDDDE--PSGSTDETLDDLIAGSST-------APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLL 240 (549)
T ss_pred ceEEEEecCccc--cCCcCcccHHHHhcCCCC-------CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHH
Confidence 111111111110 112345567777654322 11122356789999999999999999999999998888777
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC--Cc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~ 239 (499)
..+++..+++++...|++|.+++..++.++..|+++++.. .++++.+++.++++++|++.++|+++..+++.... ..
T Consensus 241 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 319 (549)
T PRK07788 241 SRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAK 319 (549)
T ss_pred hhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCC
Confidence 7788899999999999999999988888999999998885 56889999999999999999999999999887654 55
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
.+++++|.+++||+++++++.+++.+.+ +..+++.||+||++..............+++|.|+++++++|+|+++++++
T Consensus 320 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~ 398 (549)
T PRK07788 320 YDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVP 398 (549)
T ss_pred CCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCC
Confidence 6688999999999999999999998776 678999999999886554433322345678999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ .||+++ ++..+.+ |+.++.....++||+|||++++|++|++++.||.||+||++|++|+|.+
T Consensus 399 ~g~--~Gel~v~g~~~~~g------------Y~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~e 464 (549)
T PRK07788 399 RGV--VGRIFVGNGFPFEG------------YTDGRDKQIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAE 464 (549)
T ss_pred CCC--eEEEEEeCCCcccc------------ccCCCcccccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHH
Confidence 998 599999 4433332 2211111223579999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||++|. .+|+|.+++|++.+++..+ +.++++|++.++...+.+++.++ ++++|+.|+.|.+++++++||+|++|
T Consensus 465 IE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~vv~~~~~~~~~~~l~~~----~~~~l~~~~~P~~i~~v~~lP~t~~G 538 (549)
T PRK07788 465 VEDLLA-GHPDVVEAAVIGVDDEEFG-QRLRAFVVKAPGAALDEDAIKDY----VRDNLARYKVPRDVVFLDELPRNPTG 538 (549)
T ss_pred HHHHHH-hCCCeeEEEEECCcCcccc-cEEEEEEEeCCCCCCCHHHHHHH----HHHhhhcCCCCcEEEEeCCCCCCCCc
Confidence 999996 8999999999999988888 89999999887665666555555 55688899999999999999999999
Q ss_pred HHHHHHHHH
Q 010854 479 KLLRRVLRD 487 (499)
Q Consensus 479 Kv~r~~l~~ 487 (499)
|++|++|++
T Consensus 539 Ki~r~~L~~ 547 (549)
T PRK07788 539 KVLKRELRE 547 (549)
T ss_pred CEeHHHhhc
Confidence 999999975
No 11
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-63 Score=486.07 Aligned_cols=479 Identities=32% Similarity=0.420 Sum_probs=402.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++||+.++++++++||.++|++.+++-...++.++...++.+++|++++.+...+..+..+...........
T Consensus 118 ~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~ 197 (626)
T KOG1175|consen 118 LKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLL 197 (626)
T ss_pred CCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999999887766666555544443322
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchh-hHHHhhhc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEG 160 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~-~~~~~~~~ 160 (499)
...+........-.........|++.++.... ...+...+.+|+.+|+|||||||.||++.+++.. ++..+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~ 272 (626)
T KOG1175|consen 198 VSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTS 272 (626)
T ss_pred ccccccccceeeEEecccccccHHHHhhhcCC-----CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhc
Confidence 22221111111111111224566666555433 2336677889999999999999999999998865 45555666
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCC-ChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~-~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
...++++++|++.++....|+.+... +++++++|+++++.+... ++..+++.+.++++|.+++.|+.++.|.+.....
T Consensus 273 ~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~ 352 (626)
T KOG1175|consen 273 RYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQED 352 (626)
T ss_pred ceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcccc
Confidence 67789999999999999999999988 888999999999997655 7889999999999999999999999887776543
Q ss_pred --cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCCC
Q 010854 239 --GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 239 --~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~g 315 (499)
.+++++||.+.+.||+++++..+++...+....++..||+||+|..+....... +-..++.+.|.+|+.+.|+|++|
T Consensus 353 ~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g 432 (626)
T KOG1175|consen 353 VTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENG 432 (626)
T ss_pred ccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCC
Confidence 444567999999999999999999998885557999999999999888777776 67889999999999999999999
Q ss_pred CCCCCCCCcceeeEeccccc-ccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 316 VPYPDDQPCVGEVGLFPLYL-GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
++++.+. +.|+|++.+..+ +....+.+..+ +|+...+.+..++|.|||.+++|++||+++.||.||+|+++|.++
T Consensus 433 ~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~e---rf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRi 508 (626)
T KOG1175|consen 433 NELPPST-GNGELRLKPPWPPGMFRTLWGNHE---RFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRI 508 (626)
T ss_pred CCcCCCC-ceeEEEEeCCCCccccccccCCHH---HhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceee
Confidence 9999875 479999965555 44333333222 565566667778999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
++.|||+++. .||.|.|++|++.+++..| +.+++||++.++ +.+.++|.+.|++++++++.++..|+.|+++++||+
T Consensus 509 gtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFvvl~~g-~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPk 585 (626)
T KOG1175|consen 509 GTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFVVLKSG-SHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPK 585 (626)
T ss_pred cHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEEEEcCC-CCChHHHHHHHHHHHHhhcCcccccceeEecCCCCc
Confidence 9999999996 9999999999999999988 999999999998 557789999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhh
Q 010854 475 TASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~~~ 492 (499)
|.+||+.|+.||+.+.++
T Consensus 586 TrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 586 TRSGKIMRRALRKIASGK 603 (626)
T ss_pred cccchhHHHHHHHHhccC
Confidence 999999999999988776
No 12
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1e-62 Score=514.10 Aligned_cols=476 Identities=26% Similarity=0.407 Sum_probs=370.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccc---hhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL---YSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+++++.+++++++++++|+++...+..+..+. +......
T Consensus 110 v~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 189 (625)
T TIGR02188 110 VKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEK 189 (625)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999999999999999999998764332221111 1122222
Q ss_pred CC--Cc-eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 79 AP--LK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 79 ~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
.+ .. .+++........+. ......++++..... ....+....++++++++|||||||.||||+++|.+++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~ 263 (625)
T TIGR02188 190 CPVSVEHVLVVRRTGNPVPWV-EGRDVWWHDLMAKAS-----AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLL 263 (625)
T ss_pred CCCCccEEEEEcCCCCCcCcc-ccccccHHHHHhhcC-----CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHH
Confidence 22 11 22221111111110 112345666654321 11223345678999999999999999999999998765
Q ss_pred Hhh-hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 156 CTA-EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
... .....++++++|++++..|++|..+... ++.+++.|+++++.+.. .++..+++.|+++++|++.++|++++.
T Consensus 264 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 343 (625)
T TIGR02188 264 YAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRA 343 (625)
T ss_pred HHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHH
Confidence 543 3344568899999999999999988765 88999999999987532 357899999999999999999999999
Q ss_pred HHccCCC--CcccccceeEEEeecCCCChhhHHHHHhhccc--CceeccccccceeeeeecCCCC-CCCccccccccCCC
Q 010854 231 WRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMT 305 (499)
Q Consensus 231 l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~g~~~~~ 305 (499)
|.+.... ...++++||.++++|+++++++.+++.+.+.. +.+++.||+||+++.+...... .....+++|.|++|
T Consensus 344 l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g 423 (625)
T TIGR02188 344 LMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFG 423 (625)
T ss_pred HHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCC
Confidence 9886542 34568899999999999999999999887643 7899999999998765443322 23456789999999
Q ss_pred ceEEEECCCCCCCC-CCCCcceeeEecccccccc-cccccccccchhhcCCCCCCCccccccCceeEeecCceEEEeccc
Q 010854 306 AGLVILDECGVPYP-DDQPCVGEVGLFPLYLGAS-DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA 383 (499)
Q Consensus 306 ~~~~i~d~~g~~~~-~g~~~~Gei~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~ 383 (499)
++++|+|++|++++ .|+ .|||++...+.+.. .++.+++.....+. ...++||+|||++++|++|++++.||.
T Consensus 424 ~~~~i~d~~g~~~~~~g~--~GeL~v~~p~p~~~~gy~~~~~~~~~~~~----~~~~g~~~TGDl~~~d~dG~l~i~GR~ 497 (625)
T TIGR02188 424 IEPAVVDEEGNPVEGPGE--GGYLVIKQPWPGMLRTIYGDHERFVDTYF----SPFPGYYFTGDGARRDKDGYIWITGRV 497 (625)
T ss_pred ceEEEECCCCCCCCCCCC--eEEEEEccCCCcccccccCChHHHHHHHh----ccCCCEEECCceEEEcCCCcEEEEecc
Confidence 99999999999998 888 59999943222111 12222221111111 123569999999999999999999999
Q ss_pred CCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceee
Q 010854 384 DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV 463 (499)
Q Consensus 384 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 463 (499)
||+||++|++|+|.+||++|. .||+|.+++|++++++..+ +.++++|++.++...+ +++.+.++++++++|++++.|
T Consensus 498 dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~~a~vv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P 574 (625)
T TIGR02188 498 DDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAIYAFVTLKDGYEPD-DELRKELRKHVRKEIGPIAKP 574 (625)
T ss_pred cCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEEeCCCCCCC-HHHHHHHHHHHHhhcCCCccC
Confidence 999999999999999999997 8999999999999998888 9999999998765533 446667888888999999999
Q ss_pred eEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 464 SLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 464 ~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+.|+++++||+|++||++|+.|++.+.+.
T Consensus 575 ~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 575 DKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred cEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 99999999999999999999999998765
No 13
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-62 Score=512.70 Aligned_cols=479 Identities=27% Similarity=0.380 Sum_probs=365.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccch---hhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY---SKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~---~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++......+..... ......
T Consensus 136 v~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 215 (655)
T PRK03584 136 VGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAA 215 (655)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999999999999999987543222211111 122222
Q ss_pred CCC--ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH-
Q 010854 79 APL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR- 155 (499)
Q Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~- 155 (499)
.+. ..+++.................|.+++..... ..........+++++|+|||||||.||||+++|.+++.
T Consensus 216 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~ 291 (655)
T PRK03584 216 LPSLEHVVVVPYLGPAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLE 291 (655)
T ss_pred CCCccEEEEEecCCCcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHH
Confidence 222 22222211110111112234567776652211 11222345679999999999999999999999998754
Q ss_pred HhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC---CCChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 156 CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
.+......++++++|++++..++.|..+. .++.+++.|+++++.++ ..++..+++.++++++|++.++|++++.++
T Consensus 292 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 292 HLKELGLHCDLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 34455556788999999999999887543 36789999999998764 236789999999999999999999999987
Q ss_pred ccCC--CCcccccceeEEEeecCCCChhhHHHHHhhcc-cCceeccccccceeeeeecCCCCCCCccccccccCCCceEE
Q 010854 233 NTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV 309 (499)
Q Consensus 233 ~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 309 (499)
+... ....++++||.++++|+++++++.+++...+. +..+.+.||+||+++.+...........+++|.|.+|++++
T Consensus 371 ~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ 450 (655)
T PRK03584 371 KAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVE 450 (655)
T ss_pred hcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeE
Confidence 7532 23467899999999999999999999988773 57899999999986544433333344568899999999999
Q ss_pred EECCCCCCCCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee
Q 010854 310 ILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL 389 (499)
Q Consensus 310 i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~ 389 (499)
|+|++|+++ .|+ .|||+|.....+....+.+......+.. ....+..+||+|||+|++|++|+++++||.||+||+
T Consensus 451 ivd~~g~~~-~g~--~GeL~v~gp~p~~~~gy~~~~~~~~~~~-~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~ 526 (655)
T PRK03584 451 AWDEDGRPV-VGE--VGELVCTKPFPSMPLGFWNDPDGSRYRD-AYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNR 526 (655)
T ss_pred EECCCCCCC-CCC--ceEEEEccCCCCCcceeeCCCccchHHH-hhhccCCCEeecCCeEEECCCCeEEEEeeccCeeec
Confidence 999999998 677 5999994322121111212111111111 111122457899999999999999999999999999
Q ss_pred CceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEc
Q 010854 390 GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVV 469 (499)
Q Consensus 390 ~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~ 469 (499)
+|++|+|.|||++|. .||+|.+++|++.+++..+ +.++++|++.++...+ +++.+.+++++.++|++|+.|..|+++
T Consensus 527 ~G~rI~p~EIE~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~~~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v 603 (655)
T PRK03584 527 GGVRIGTAEIYRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAEGVTLD-DALRARIRTTIRTNLSPRHVPDKIIAV 603 (655)
T ss_pred CcEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECCCCCCc-HHHHHHHHHHHHhhCCCCcCCCEEEEC
Confidence 999999999999996 8999999999999998777 9999999998765433 456677888888999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhh
Q 010854 470 PEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 470 ~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++||+|++|||+|+.|++.+.+.
T Consensus 604 ~~lP~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 604 PDIPRTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred CCCCCCCCccchHHHHHHHHcCC
Confidence 99999999999999999988654
No 14
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.3e-62 Score=511.15 Aligned_cols=475 Identities=27% Similarity=0.363 Sum_probs=360.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccc---cchhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF---PLYSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.. +.+......
T Consensus 136 v~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~ 215 (652)
T TIGR01217 136 VRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKE 215 (652)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999999999999999987543222211 112222222
Q ss_pred CCC-c-eEEecccCCC-CCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 79 APL-K-AIVLPAIGND-VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 79 ~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
.+. . .+++...... ...........|+++...... ..........+++++|+|||||||.||||+++|.+++.
T Consensus 216 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~ 291 (652)
T TIGR01217 216 LPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLV 291 (652)
T ss_pred CCCccEEEEEeCCCCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHH
Confidence 221 1 2222211100 000001234567776553221 11112234568999999999999999999999998654
Q ss_pred -HhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 156 -CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 156 -~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
.+......++++++|++++..+++|..+. .++.+++.|+++++.++. .++..+++.++++++|++...|++++.+
T Consensus 292 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 370 (652)
T TIGR01217 292 QHLKEHGLHCDLGPGDRLFYYTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMAC 370 (652)
T ss_pred HHHHHHHhccCCCCCcEEEEeCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHH
Confidence 33444455788999999999999998642 356899999999998632 2567899999999999998888888777
Q ss_pred HccCC--CCcccccceeEEEeecCCCChhhHHHHHhhcc-cCceeccccccceeeeeecCCCCCCCccccccccCCCceE
Q 010854 232 RNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 308 (499)
Q Consensus 232 ~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 308 (499)
.+... ....++++||.++++|+++++++.+++.+.+. +..+.+.||+||+++.+...........+++|.|.+|+++
T Consensus 371 ~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v 450 (652)
T TIGR01217 371 RKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAV 450 (652)
T ss_pred HhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCce
Confidence 65432 23567899999999999999999999887764 2457789999997544433333334456788999999999
Q ss_pred EEECCCCCCCCCCCCcceeeEecccccccc-cccccccccc---hhhcCCCCCCCccccccCceeEeecCceEEEecccC
Q 010854 309 VILDECGVPYPDDQPCVGEVGLFPLYLGAS-DRLLNADHEE---VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRAD 384 (499)
Q Consensus 309 ~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~ 384 (499)
+|+|++|+++ .|+ .|||++.....+.. .++.+++.+. .++. +.++||+|||+|++|+||+++++||.|
T Consensus 451 ~ivd~~g~~~-~g~--~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~-----~~~g~~~tGDlg~~d~dG~l~i~GR~d 522 (652)
T TIGR01217 451 QSWDPEGKPV-TGE--VGELVCTNPMPSMPIRFWNDPDGSKYRDAYFD-----TYPGVWRHGDWITLTPRGGIVIHGRSD 522 (652)
T ss_pred EEECCCCCCC-CCC--ccEEEEecCCCccccceeCCCccchhHHhhhc-----CCCCEEEcCCcEEECCCCcEEEEeccc
Confidence 9999999998 476 59999943222211 1222222111 1221 234678999999999999999999999
Q ss_pred CeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeee
Q 010854 385 DTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVS 464 (499)
Q Consensus 385 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 464 (499)
|+||++|++|+|.|||++|. .||+|.+++|++++++..+ +.++++|++.++...+ +++.+.++++++++|++|+.|.
T Consensus 523 d~I~~~G~ri~p~EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~ 599 (652)
T TIGR01217 523 STLNPQGVRMGSAEIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAPGATLD-DALLDRIKRTIRAGLSPRHVPD 599 (652)
T ss_pred CeEecCCEEcCHHHHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECCCCCCC-HHHHHHHHHHHHhhCCCCcCCC
Confidence 99999999999999999997 9999999999999998888 9999999998765544 4566778888889999999999
Q ss_pred EEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 465 LVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 465 ~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
.|+++++||+|++||++|+.|++.+.++
T Consensus 600 ~i~~v~~lP~T~sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 600 EIIEVPGIPHTLTGKRVEVAVKRVLQGT 627 (652)
T ss_pred EEEECCCCCCCCCccChHHHHHHHHcCC
Confidence 9999999999999999999999987543
No 15
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-62 Score=507.62 Aligned_cols=474 Identities=26% Similarity=0.376 Sum_probs=367.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCcccc---chhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFP---LYSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.........+ ........
T Consensus 120 v~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 199 (637)
T PRK00174 120 VKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALAN 199 (637)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHh
Confidence 689999999999999999999999999999999999999999999999999999999875432111111 11112221
Q ss_pred CCCc--eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 79 APLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 79 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
.+.. .+++......... .......++++..... .........++++++++|||||||.||||+++|++++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~ 273 (637)
T PRK00174 200 CPSVEKVIVVRRTGGDVDW-VEGRDLWWHELVAGAS-----DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVY 273 (637)
T ss_pred CCCccEEEEEcCCCCCcCc-CCCCcccHHHHHhhcC-----CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHH
Confidence 2221 2222111111110 0112344566554221 111223456789999999999999999999999997654
Q ss_pred hh-hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCC---CCChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 157 TA-EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 157 ~~-~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
+. .....++++++|++++..|++|..+... ++.++++|+++++.++ ..++..+++.|+++++|++.++|++++.|
T Consensus 274 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 353 (637)
T PRK00174 274 AAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRAL 353 (637)
T ss_pred HHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHH
Confidence 43 3334568889999999999999998764 8899999999998753 23578999999999999999999999999
Q ss_pred HccCCC--CcccccceeEEEeecCCCChhhHHHHHhhccc--CceeccccccceeeeeecCCCC-CCCccccccccCCCc
Q 010854 232 RNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTA 306 (499)
Q Consensus 232 ~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~g~~~~~~ 306 (499)
++.... ...++++||.++++|+++++++.+++...+.. +.+++.||+||++......... .....+++|.|++|+
T Consensus 354 ~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~ 433 (637)
T PRK00174 354 MKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGI 433 (637)
T ss_pred HhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCc
Confidence 887543 34567899999999999999999988877643 7899999999998755433221 223457899999999
Q ss_pred eEEEECCCCCCCCCCCCcceeeEecc---cccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEeccc
Q 010854 307 GLVILDECGVPYPDDQPCVGEVGLFP---LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA 383 (499)
Q Consensus 307 ~~~i~d~~g~~~~~g~~~~Gei~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~ 383 (499)
+++|+|++|++++.|+ .|||+|.. ..+.+ ++.+++.+...+ ....++||+|||++++|++|++++.||.
T Consensus 434 ~~~i~d~~g~~~~~g~--~Gel~v~g~~p~~~~g--y~~~~~~~~~~~----~~~~~g~~~TGDl~~~d~dG~l~~~GR~ 505 (637)
T PRK00174 434 QPAVVDEEGNPLEGGE--GGNLVIKDPWPGMMRT--IYGDHERFVKTY----FSTFKGMYFTGDGARRDEDGYYWITGRV 505 (637)
T ss_pred eEEEECCCCCCCCCCC--cEEEEEcCCCCccccc--ccCCHHHHHHhh----hcCCCCEEECCceEEEcCCCcEEEEEec
Confidence 9999999999999998 49999943 33322 222222111111 1134579999999999999999999999
Q ss_pred CCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceee
Q 010854 384 DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV 463 (499)
Q Consensus 384 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 463 (499)
||+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++|++.++...+ +++.+.+++++.+.|+.|+.|
T Consensus 506 dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a~vv~~~~~~~~-~~~~~~l~~~l~~~l~~~~~P 582 (637)
T PRK00174 506 DDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYAFVTLKGGEEPS-DELRKELRNWVRKEIGPIAKP 582 (637)
T ss_pred ccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEEECCCCCCC-HHHHHHHHHHHHhhcCCccCC
Confidence 999999999999999999996 8999999999999998888 9999999998765433 455667788888899999999
Q ss_pred eEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 464 SLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 464 ~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
..++++++||+|++||++|++|++.+.+.
T Consensus 583 ~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 583 DVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred CEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 99999999999999999999999987665
No 16
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-62 Score=503.63 Aligned_cols=455 Identities=17% Similarity=0.168 Sum_probs=348.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc---C
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---A 79 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~---~ 79 (499)
.+||+|+++++|++++++++|||+++|++++|+++..+.+++.++|++++++++|++.+... .+...... .
T Consensus 65 ~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~ 138 (539)
T PRK06334 65 YPDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQ------HLAQTHGEDAEY 138 (539)
T ss_pred ccCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHH------HHhhhhhccccc
Confidence 37999999999999999999999999999999999999999999999999999999875421 11111110 1
Q ss_pred CCceEEecccCCCCCCCCCcCCCCHHHHhcccC--CCCCC---CCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 80 PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVD--YHPRP---NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
+...+.+.... ....+.+...... ..+.. .........++++++++|||||||.||+|+++|+++.
T Consensus 139 ~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~ 209 (539)
T PRK06334 139 PFSLIYMEEVR---------KELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLL 209 (539)
T ss_pred cccEEEEehhh---------hhccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHH
Confidence 11112111100 0011111110000 00000 0011123567999999999999999999999999998
Q ss_pred HHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHc
Q 010854 155 RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRN 233 (499)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 233 (499)
.........++++.+|++++.+|++|.+++.. ++.++..|+++++.+..++++.+++.|+++++|++.++|++++.|++
T Consensus 210 ~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 210 ANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred HHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 88777766778899999999999999999875 78899999999987656788999999999999999999999999988
Q ss_pred cCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-
Q 010854 234 TNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD- 312 (499)
Q Consensus 234 ~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d- 312 (499)
.......+++++|.+++||+++++++.+++...+++..+++.||+||++..+...........+++|+|+++++++|+|
T Consensus 290 ~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~ 369 (539)
T PRK06334 290 TAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSE 369 (539)
T ss_pred hhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcC
Confidence 7655566788999999999999999999998888778999999999998665544333333456899999999999999
Q ss_pred CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCc
Q 010854 313 ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGG 391 (499)
Q Consensus 313 ~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G 391 (499)
+++.+++.|+ .|||+| ++..+.+ ++.+++... .. ...+++||+|||+|++|++|++++.||.||+||++|
T Consensus 370 ~~~~~~~~g~--~Gel~v~g~~~~~G--Y~~~~~~~~-~~----~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G 440 (539)
T PRK06334 370 ETKVPVSSGE--TGLVLTRGTSLFSG--YLGEDFGQG-FV----ELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGA 440 (539)
T ss_pred CCCccCCCCc--eEEEEEecCccccc--ccCCccccc-ce----eeCCceeEECCCEEEECCCCeEEEEeccCCeEEECC
Confidence 5688999998 599999 5554443 122222111 10 123578999999999999999999999999999999
Q ss_pred eeechHHHHHHHhhcCcccee------eeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCceeee
Q 010854 392 IKTSSVEIERVCDQADESILE------TAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK-LNPLFKVS 464 (499)
Q Consensus 392 ~~v~~~~iE~~l~~~~~~v~~------~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~p~ 464 (499)
++|+|.|||++|. .||+|.+ ++|++.++. . ..++++++.. .+.+++.++ +.+. ++.|+.|+
T Consensus 441 ~~v~p~eIE~~l~-~~~~v~~~~~~~~~~v~~~~~~--~-~~~~~~~~~~----~~~~~~~~~----l~~~~~~~~~~P~ 508 (539)
T PRK06334 441 EMVSLEALESILM-EGFGQNAADHAGPLVVCGLPGE--K-VRLCLFTTFP----TSISEVNDI----LKNSKTSSILKIS 508 (539)
T ss_pred EEECHHHHHHHHH-HccCCccccccCceEEEcCCCC--c-eEEEEEEecc----CChHHHHHH----HHhcCCcccccch
Confidence 9999999999997 8999987 666666632 1 3455555432 244455555 4343 78899999
Q ss_pred EEEEcCCCCCCCCcHHHHHHHHHHHHhhh
Q 010854 465 LVKVVPEFPRTASNKLLRRVLRDQIKHEL 493 (499)
Q Consensus 465 ~~~~~~~iP~t~~GKv~r~~l~~~~~~~~ 493 (499)
.++++++||+|++|||+|+.|++.+..-+
T Consensus 509 ~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 537 (539)
T PRK06334 509 YHHQVESIPMLGTGKPDYCSLNALAKSLF 537 (539)
T ss_pred heeeecccccccCCcccHHHHHHHHHHhh
Confidence 99999999999999999999999876543
No 17
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-61 Score=501.40 Aligned_cols=458 Identities=23% Similarity=0.320 Sum_probs=371.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCC-
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP- 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~- 80 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++++++.+++++++++.+|+++........ ...+
T Consensus 95 v~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~ 166 (570)
T PRK04319 95 VEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPS 166 (570)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCC
Confidence 6899999999999999999999999999999999999999999999999999999998764321110 0111
Q ss_pred CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 81 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
...+++.. ... .......++.+++..... ........++++++++|||||||.||+|+++|+++...+...
T Consensus 167 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~ 237 (570)
T PRK04319 167 LKHVLLVG-EDV---EEGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTG 237 (570)
T ss_pred ceEEEEEC-CCc---CCCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHH
Confidence 11222211 111 012234566666544321 122233457899999999999999999999999999888777
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCC--C
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--L 237 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~ 237 (499)
...++++++|++++..|++|.+++.. ++.+++.|+++++.+..++++.+++.|+++++|+++++|++++.|.+... .
T Consensus 238 ~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 317 (570)
T PRK04319 238 KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLV 317 (570)
T ss_pred HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCccc
Confidence 77788999999999999999998765 88999999999998777789999999999999999999999999987643 2
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVP 317 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~ 317 (499)
...+++++|.++++|+++++++.+++...+ +..+++.||+||++..+...........+++|.|.|+++++|+|+++.+
T Consensus 318 ~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~ 396 (570)
T PRK04319 318 KKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNE 396 (570)
T ss_pred ccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCC
Confidence 345678999999999999999999888765 6889999999999876554433333456789999999999999999999
Q ss_pred CCCCCCcceeeEec---ccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 318 YPDDQPCVGEVGLF---PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 318 ~~~g~~~~Gei~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
++.|+ +|||++. +..+. .++.+++.+...+. ++||+|||+++++++|++++.||.+|+|+.+|++|
T Consensus 397 ~~~g~--~Gel~i~~~~~~~~~--GY~~~~~~~~~~~~-------~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i 465 (570)
T PRK04319 397 LPPNR--MGNLAIKKGWPSMMR--GIWNNPEKYESYFA-------GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERV 465 (570)
T ss_pred CCCCC--ceEEEEcCCCChHHh--HhcCCHHHhhhhhc-------CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEE
Confidence 99998 5999994 22221 12223333333332 46999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.+||+++. ++|+|.+++|++.+++..+ +.+++++++.++... .+++.+.+++++++.|+.|+.|..++++++||+
T Consensus 466 ~p~eIE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~a~v~~~~~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~ 542 (570)
T PRK04319 466 GPFEVESKLM-EHPAVAEAGVIGKPDPVRG-EIIKAFVALRPGYEP-SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPK 542 (570)
T ss_pred CHHHHHHHHh-hCCCeeecceecccCcCCc-eEEEEEEEECCCCCC-CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCC
Confidence 9999999997 8999999999999998888 999999998875443 245666788888889999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHh
Q 010854 475 TASNKLLRRVLRDQIKH 491 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~~ 491 (499)
|++||++|++|++++.+
T Consensus 543 t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 543 TRSGKIMRRVLKAWELG 559 (570)
T ss_pred CCchhhhHHHHHHHHhC
Confidence 99999999999998754
No 18
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-61 Score=505.09 Aligned_cols=467 Identities=21% Similarity=0.208 Sum_probs=366.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++| +++|+++.++++++.+++++++++++|++..... ..............+.
T Consensus 80 i~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~ 157 (632)
T PRK07529 80 VGPGDVVAFLLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPG-TDIWQKVAEVLAALPE 157 (632)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCC-chHHHHHHHHHhcCCc
Confidence 6799999999999999999999999999 5799999999999999999999999999864310 0111112222222222
Q ss_pred ceEEecccC-CCCCCC-----------CCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010854 82 KAIVLPAIG-NDVGIP-----------LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT 149 (499)
Q Consensus 82 ~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s 149 (499)
...++.... ...... ...+...+.+.+..... ..........++++++++|||||||.||+|+++
T Consensus 158 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~s 234 (632)
T PRK07529 158 LRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHT 234 (632)
T ss_pred ceeEEEecCcccccccccccccccccccccccCCHHHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEc
Confidence 222222111 100000 12234456665544321 111122234679999999999999999999999
Q ss_pred chhhHHHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCC-C-C---hhHHHHHHHHhCCeEEec
Q 010854 150 QLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS-P-L---ERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~-~-~---~~~~~~~i~~~~~t~l~~ 223 (499)
|+++...+......+++++++++++.+|++|.+++.. ++.+++.|+++++.++. + . ...+++.++++++|++.+
T Consensus 235 h~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~ 314 (632)
T PRK07529 235 HGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSG 314 (632)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEe
Confidence 9999888777766778899999999999999999875 88999999999998632 1 1 257889999999999999
Q ss_pred chHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccC
Q 010854 224 VPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT 303 (499)
Q Consensus 224 ~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~ 303 (499)
+|+++..|++... ...+++++|.+++||+++++++.+.+++.+ ++++++.||+||++.....+........+++|.|+
T Consensus 315 ~P~~~~~l~~~~~-~~~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~ 392 (632)
T PRK07529 315 VPTVYAALLQVPV-DGHDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRL 392 (632)
T ss_pred HHHHHHHHHhCcc-cCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCccccc
Confidence 9999999988653 235688999999999999999999998766 78999999999998766555444445678999999
Q ss_pred CCceEEEE--CCCC---CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceE
Q 010854 304 MTAGLVIL--DECG---VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYI 377 (499)
Q Consensus 304 ~~~~~~i~--d~~g---~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l 377 (499)
|++.++|+ |++| ++++.|+ +|||+| ++..+.++ + +.+.+...+ .+++||+|||+|++|++|++
T Consensus 393 p~~~v~i~~~d~~g~~~~~~~~g~--~Gel~v~gp~v~~GY--~-~~~~~~~~~------~~~gw~~TGDlg~~d~dG~l 461 (632)
T PRK07529 393 PYQRVRVVILDDAGRYLRDCAVDE--VGVLCIAGPNVFSGY--L-EAAHNKGLW------LEDGWLNTGDLGRIDADGYF 461 (632)
T ss_pred CCceEEEEEcCCCCcccccCCCCC--ceEEEEECCCccccc--c-CCccccccc------cCCCceEcCcEEEEcCCceE
Confidence 99999985 6777 7889998 599999 66655542 2 222222222 24689999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 010854 378 IVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 378 ~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l 457 (499)
++.||.||+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++|++.++...+.+++.+++++ .+
T Consensus 462 ~i~GR~~d~i~~~G~~i~p~eIE~~l~-~~p~V~~a~vvg~~d~~~g-e~~~a~v~l~~~~~~~~~~l~~~~~~----~l 535 (632)
T PRK07529 462 WLTGRAKDLIIRGGHNIDPAAIEEALL-RHPAVALAAAVGRPDAHAG-ELPVAYVQLKPGASATEAELLAFARD----HI 535 (632)
T ss_pred EEEecccCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceeEEEEEEcCCCCCCHHHHHHHHHH----hc
Confidence 999999999999999999999999997 8999999999999998888 99999999998777777777776554 45
Q ss_pred C-CceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 458 N-PLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 458 ~-~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+ .++.|+.++++++||+|++||++|+.|++.+..+
T Consensus 536 ~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 536 AERAAVPKHVRILDALPKTAVGKIFKPALRRDAIRR 571 (632)
T ss_pred chhccCCcEEEEecCCCCCCCCcccHHHHHHHHHHH
Confidence 4 4688999999999999999999999999887654
No 19
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-61 Score=502.14 Aligned_cols=475 Identities=23% Similarity=0.319 Sum_probs=364.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccc---cchhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF---PLYSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..++++++++++|+++...+..+.. +.+......
T Consensus 106 v~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 185 (629)
T PRK10524 106 VQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIAL 185 (629)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999977533222211 112222221
Q ss_pred C---CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 79 A---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 79 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
. ....+++........ ........+.++...... .........++++++++|||||||.||||+++|.++..
T Consensus 186 ~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~ 260 (629)
T PRK10524 186 AQHKPRHVLLVDRGLAPMA-RVAGRDVDYATLRAQHLG----ARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAV 260 (629)
T ss_pred cCCCCCEEEEEeCCCCCcC-cccCCcccHHHHHhcCCC----CCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHH
Confidence 1 122222221111100 011123455555443221 11112234578999999999999999999999998754
Q ss_pred Hhh-hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCC---CCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 156 CTA-EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
... .....++++++|++++..+++|..+... ++.+++.|+++++.++ ..++..+++.|+++++|++.++|++++.
T Consensus 261 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 340 (629)
T PRK10524 261 ALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRV 340 (629)
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHH
Confidence 443 3334567899999999999999988755 8899999999998764 2357889999999999999999999999
Q ss_pred HHccCC--CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC---CCCccccccccCCC
Q 010854 231 WRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMT 305 (499)
Q Consensus 231 l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~---~~~~~~~~g~~~~~ 305 (499)
|.+... ....+++++|.++++|+++++++.+++.+.+ ++.+++.||+||++..+...... .....+++|.|+++
T Consensus 341 l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g 419 (629)
T PRK10524 341 LKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYG 419 (629)
T ss_pred HHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCC
Confidence 887643 2345688999999999999999999988776 68899999999998433322211 23346789999999
Q ss_pred ceEEEECC-CCCCCCCCCCcceeeEe-cc---cccccccccccccccc-hhhcCCCCCCCccccccCceeEeecCceEEE
Q 010854 306 AGLVILDE-CGVPYPDDQPCVGEVGL-FP---LYLGASDRLLNADHEE-VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIV 379 (499)
Q Consensus 306 ~~~~i~d~-~g~~~~~g~~~~Gei~v-~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~ 379 (499)
++++|+|+ +|++++.|+ .|||++ ++ +++.+ ++.+++... .+|.. .+++||+|||+|++|++|++++
T Consensus 420 ~~~~i~d~~~g~~~~~g~--~Gel~i~gp~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~TGDl~~~d~dG~l~i 491 (629)
T PRK10524 420 YNVKLLNEVTGEPCGPNE--KGVLVIEGPLPPGCMQT--VWGDDDRFVKTYWSL----FGRQVYSTFDWGIRDADGYYFI 491 (629)
T ss_pred ceEEEEeCCCCCCCCCCC--cEEEEEcCCCChhhcCC--ccCChHHHHHhhhcc----CCCcEEEcCCcEEEcCCCcEEE
Confidence 99999997 999999998 599999 44 22222 111221111 12211 1457999999999999999999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCC----HHHHHHHHHHHHHh
Q 010854 380 QGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ----PDKLKMIFSKAIQS 455 (499)
Q Consensus 380 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~~~~~~~ 455 (499)
.||.||+||++|++|+|.+||++|. .||+|.+++|++++++..+ +.++++|++.++...+ .+++.+.+++++++
T Consensus 492 ~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~ 569 (629)
T PRK10524 492 LGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-QVAVAFVVPKDSDSLADREARLALEKEIMALVDS 569 (629)
T ss_pred EEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-eEEEEEEEECCCCccccccchHHHHHHHHHHHHh
Confidence 9999999999999999999999997 8999999999999998877 8999999988754322 24567788888999
Q ss_pred hcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 456 KLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 456 ~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+|+.|+.|..|+++++||+|++||++|+.|++.+.++
T Consensus 570 ~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 606 (629)
T PRK10524 570 QLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR 606 (629)
T ss_pred hcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 9999999999999999999999999999999987653
No 20
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=7.1e-61 Score=494.04 Aligned_cols=467 Identities=17% Similarity=0.125 Sum_probs=352.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhh-hcCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAP 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~ 80 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++... ....... ...+
T Consensus 54 v~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~ 127 (563)
T PLN02860 54 LRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCS------SWYEELQNDRLP 127 (563)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccc------hHHHHHhhccCC
Confidence 68999999999999999999999999999999999999999999999999999999987431 1111111 1111
Q ss_pred CceEEecccCCCCCC-CCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 81 LKAIVLPAIGNDVGI-PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
....++......... .........+++...... .........++++++++|||||||.||+|+++|+++..+...
T Consensus 128 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~ 203 (563)
T PLN02860 128 SLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG----TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLA 203 (563)
T ss_pred ceeEEEEecCcccccccchhhccccchhccCccc----cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHH
Confidence 111111111110000 000011111111111000 001112345789999999999999999999999999877766
Q ss_pred cceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC--
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-- 237 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~-- 237 (499)
....+++.++|+++...|++|.+++..++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|++....
T Consensus 204 ~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 282 (563)
T PLN02860 204 KIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM 282 (563)
T ss_pred HHhhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh
Confidence 666678899999999999999999888889999999999886 56889999999999999999999999999876432
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----------------------CCc
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------------------PQA 295 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----------------------~~~ 295 (499)
...+++++|.+++||+.+++++.+.+++.+++..+++.||+||++..+....... ...
T Consensus 283 ~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (563)
T PLN02860 283 TWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQ 362 (563)
T ss_pred ccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccC
Confidence 2345789999999999999999999988887889999999999875443221111 111
Q ss_pred cccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecC
Q 010854 296 FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 296 ~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 374 (499)
..++|+|+|+++++|++++ +|+ +|||++ ++..+.+ ++.+++.+...+ ..++||+|||+|++|++
T Consensus 363 ~~~vG~p~~~~~v~i~~~~-----~g~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~------~~~g~~~TGDl~~~d~d 427 (563)
T PLN02860 363 GVCVGKPAPHVELKIGLDE-----SSR--VGRILTRGPHVMLG--YWGQNSETASVL------SNDGWLDTGDIGWIDKA 427 (563)
T ss_pred CcccCCccCCcEEEEecCC-----CCc--eeEEEEecCccccc--ccCCccccchhc------cCCCeEEccceEEEcCC
Confidence 2368999999999999865 455 599999 5554433 222222222212 34689999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCC----------HHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ----------PDK 444 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~~ 444 (499)
|++++.||.+|+||++|++|+|.+||+++. .||+|.+++|++.++...+ +.++++|++.++.... ...
T Consensus 428 G~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~ 505 (563)
T PLN02860 428 GNLWLIGRSNDRIKTGGENVYPEEVEAVLS-QHPGVASVVVVGVPDSRLT-EMVVACVRLRDGWIWSDNEKENAKKNLTL 505 (563)
T ss_pred CCEEEeecccceeEECCEEccHHHHHHHHH-hCCCcceeEEEEEecCcCC-ceEEEEEEECCccccccccchhhcccccc
Confidence 999999999999999999999999999996 8999999999999988888 8999999987652100 011
Q ss_pred HHHHHHHHHHh-hcCCceeeeEEEEc-CCCCCCCCcHHHHHHHHHHHHhhhhhc
Q 010854 445 LKMIFSKAIQS-KLNPLFKVSLVKVV-PEFPRTASNKLLRRVLRDQIKHELSVR 496 (499)
Q Consensus 445 l~~~~~~~~~~-~l~~~~~p~~~~~~-~~iP~t~~GKv~r~~l~~~~~~~~~~~ 496 (499)
..+.+++++.+ +|+.|+.|..++++ ++||+|++||++|++|++++.+++.+.
T Consensus 506 ~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 506 SSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred cHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHHHHhcc
Confidence 12344455555 59999999888765 789999999999999999998887764
No 21
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.5e-60 Score=491.36 Aligned_cols=460 Identities=19% Similarity=0.224 Sum_probs=361.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.++++.++++.++++++.... . .....
T Consensus 89 ~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~---------~-~~~~~ 158 (560)
T PLN02574 89 VRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEK---------L-SPLGV 158 (560)
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHH---------H-HhcCC
Confidence 6899999999999999999999999999999999999999999999999999999998753211 1 11111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.+.... ... ........+.++...... ........++++++++|||||||.||+|+++|+++...+....
T Consensus 159 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~ 231 (560)
T PLN02574 159 PVIGVPENY-DFD-SKRIEFPKFYELIKEDFD-----FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFV 231 (560)
T ss_pred cEEecCccc-ccc-cCccCcccHHHHhhcCCc-----ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHH
Confidence 111111000 000 001122355555543221 1112234578999999999999999999999999887766443
Q ss_pred e----ecc-CcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccC
Q 010854 162 A----HID-LKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN 235 (499)
Q Consensus 162 ~----~~~-~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 235 (499)
. .+. ....++++..+|++|.+++.. ++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|++..
T Consensus 232 ~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 310 (560)
T PLN02574 232 RFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKA 310 (560)
T ss_pred hccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCc
Confidence 2 122 235678899999999999876 777888999999886 567899999999999999999999999998875
Q ss_pred CC-CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC-CCCCccccccccCCCceEEEEC-
Q 010854 236 CL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD- 312 (499)
Q Consensus 236 ~~-~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d- 312 (499)
.. ...+++++|.++++|++++++..+.+.+.+++..+++.||+||++........ ......+++|.|.|+++++|+|
T Consensus 311 ~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~ 390 (560)
T PLN02574 311 KGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDW 390 (560)
T ss_pred cccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeC
Confidence 43 34567899999999999999999999888878899999999999865443222 2224567899999999999999
Q ss_pred CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCc
Q 010854 313 ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGG 391 (499)
Q Consensus 313 ~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G 391 (499)
++|++++.|+ .|||+| ++..+.+ ++.+++.+...+ ..++||+|||+|++|++|++++.||.+|+||++|
T Consensus 391 ~~g~~~~~g~--~Gei~v~g~~~~~G--Y~~~~~~t~~~~------~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G 460 (560)
T PLN02574 391 STGCLLPPGN--CGELWIQGPGVMKG--YLNNPKATQSTI------DKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKG 460 (560)
T ss_pred CCCcCCCCCC--CeEEEEECcchhhh--hcCChhHhhhhc------cCCCCcccceEEEEECCCeEEEEecchhheEECC
Confidence 8899999998 499999 5544433 222232222222 3468999999999999999999999999999999
Q ss_pred eeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCC
Q 010854 392 IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 471 (499)
Q Consensus 392 ~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~ 471 (499)
++|+|.+||++|. .||+|.+++|++++++..+ +.++++|+..++...+.+++.++ ++++|++|+.|..++++++
T Consensus 461 ~~v~~~eiE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~v~~~~~~~~~~~~l~~~----~~~~l~~~~~p~~v~~v~~ 534 (560)
T PLN02574 461 FQIAPADLEAVLI-SHPEIIDAAVTAVPDKECG-EIPVAFVVRRQGSTLSQEAVINY----VAKQVAPYKKVRKVVFVQS 534 (560)
T ss_pred EEECHHHHHHHHH-hCCCcceEEEEccccCCCC-cceEEEEEeCCCCCCCHHHHHHH----HHHhccCcccCcEEEEeec
Confidence 9999999999997 8999999999999988777 88999999877655555555544 6678999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhhh
Q 010854 472 FPRTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 472 iP~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
||+|++||++|+.|++++.+.-++
T Consensus 535 iP~t~~GKi~r~~L~~~~~~~~~~ 558 (560)
T PLN02574 535 IPKSPAGKILRRELKRSLTNSVSS 558 (560)
T ss_pred cCCCCcchhhHHHHHHHHhhcccc
Confidence 999999999999999999776543
No 22
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.4e-61 Score=500.57 Aligned_cols=465 Identities=17% Similarity=0.132 Sum_probs=352.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|+++|++++|||+++|++++|+++.++++++.+++++++++++|++.+.. +.+.......+.
T Consensus 100 v~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~ 173 (651)
T PLN02736 100 IPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPS 173 (651)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCC
Confidence 68999999999999999999999999999999999999999999999999999999987542 122222222222
Q ss_pred ceEEecccCCCCCC-----CCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 82 KAIVLPAIGNDVGI-----PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
...++......... .......+++++....... ........++|+++|+|||||||.||||++||+++...
T Consensus 174 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~ 249 (651)
T PLN02736 174 VRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSS----PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIAN 249 (651)
T ss_pred ceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccC----CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHH
Confidence 22222221110000 0011234677766543221 11122346799999999999999999999999999998
Q ss_pred hhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCC
Q 010854 157 TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 236 (499)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 236 (499)
+......+++.++|++++.+|++|.++...++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+.+...
T Consensus 250 ~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~ 327 (651)
T PLN02736 250 VAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGIT 327 (651)
T ss_pred HHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHH
Confidence 8888777888999999999999999999888889999999988763 56789999999999999999999988755310
Q ss_pred -----------------------------CCc------------ccc-cceeEEEeecCCCChhhHHHHHhhcccCceec
Q 010854 237 -----------------------------LEG------------LDW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 274 (499)
Q Consensus 237 -----------------------------~~~------------~~l-~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~ 274 (499)
... ..+ +++|.+++||+++++++.++++..+ +..+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~ 406 (651)
T PLN02736 328 NAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLE 406 (651)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEE
Confidence 000 011 4899999999999999999888766 688999
Q ss_pred cccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCC---CCCCCCcceeeEe-cccccccccccccccccch
Q 010854 275 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVP---YPDDQPCVGEVGL-FPLYLGASDRLLNADHEEV 349 (499)
Q Consensus 275 ~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~---~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~ 349 (499)
.||+||+++....... .....+++|.|+|+++++|+| +++.. ..++. .|||+| ++..+.+ ++.+++.+..
T Consensus 407 ~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~--~GEl~vrgp~v~~G--Y~~~~~~t~~ 481 (651)
T PLN02736 407 GYGMTETSCVISGMDE-GDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYP--RGEICVRGPIIFKG--YYKDEVQTRE 481 (651)
T ss_pred EechHHhchheeccCC-CCCCCCccCCccCceEEEEEEccccCcccCCCCCC--CceEEecCCccccc--cccCHHHHHh
Confidence 9999998865543332 234568899999999999998 33221 12222 499999 6666554 3334444333
Q ss_pred hhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEE
Q 010854 350 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 428 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~ 428 (499)
.| +.++||+|||+|++|+||+|+|+||.||+||+ +|++|+|.+||++|. .||.|.+++|++. ..+ +.+
T Consensus 482 ~~------~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~---~~~-~~~ 550 (651)
T PLN02736 482 VI------DEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYA-KCKFVAQCFVYGD---SLN-SSL 550 (651)
T ss_pred hh------ccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHh-cCCCeeEEEEEec---CCC-cee
Confidence 33 34689999999999999999999999999996 799999999999996 8999999999983 244 789
Q ss_pred EEEEEecCCC--------CCCHHHH---------HHHHHHHH-----HhhcCCceeeeEEEEcCCCC------CCCCcHH
Q 010854 429 VIFVVLKKGF--------TSQPDKL---------KMIFSKAI-----QSKLNPLFKVSLVKVVPEFP------RTASNKL 480 (499)
Q Consensus 429 ~~~v~~~~~~--------~~~~~~l---------~~~~~~~~-----~~~l~~~~~p~~~~~~~~iP------~t~~GKv 480 (499)
+|+|+++.+. ..+..++ ++.+.+.+ +.+|+.|++|++|+++++.| +|++||+
T Consensus 551 ~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki 630 (651)
T PLN02736 551 VAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKV 630 (651)
T ss_pred EEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhh
Confidence 9999987521 1121222 22222222 23699999999999999876 6999999
Q ss_pred HHHHHHHHHHhhhhh
Q 010854 481 LRRVLRDQIKHELSV 495 (499)
Q Consensus 481 ~r~~l~~~~~~~~~~ 495 (499)
+|+.|++.|++++++
T Consensus 631 ~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 631 KRPQAKAYFAKAISD 645 (651)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999999998864
No 23
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.4e-59 Score=483.29 Aligned_cols=462 Identities=19% Similarity=0.233 Sum_probs=365.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++.+|+++.+.. .+......++....+.
T Consensus 77 ~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~ 155 (547)
T PRK13295 77 VGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPA 155 (547)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCC
Confidence 679999999999999999999999999999999999999999999999999999999875310 0111111112122222
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCC---CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH---PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
...++.... ....++.++....... ............++++++++|||||||.||+|+++|+++...+.
T Consensus 156 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~ 227 (547)
T PRK13295 156 LRHVVVVGG--------DGADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIV 227 (547)
T ss_pred cceEEEecC--------CCccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHH
Confidence 112221111 1223455544322110 01111122335678999999999999999999999999998888
Q ss_pred hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL 237 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 237 (499)
.....+++++++++++.+|++|.+++.. ++.+++.|+++++.+ ..+++.+++.++++++|++.++|+++..|......
T Consensus 228 ~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~ 306 (547)
T PRK13295 228 PYAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE 306 (547)
T ss_pred HHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc
Confidence 7777788999999999999999998765 889999999999886 56789999999999999999999999999987766
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCCCC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
...+++++|.++++|+++++++.+++.+.+ ++++++.||+||++.....+.... .....++|+|.++++++|+|++++
T Consensus 307 ~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~ 385 (547)
T PRK13295 307 SGRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGA 385 (547)
T ss_pred cCCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCC
Confidence 667788999999999999999999988777 789999999999987654443221 223468899999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeec
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 395 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~ 395 (499)
+++.|+ .|||+| ++..+.+ ++.+++.+.. ..++||+|||+|+++++|++++.||.+|+++++|++|+
T Consensus 386 ~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~--------~~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 453 (547)
T PRK13295 386 PLPAGQ--IGRLQVRGCSNFGG--YLKRPQLNGT--------DADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIP 453 (547)
T ss_pred CCCCCC--CCeEEEEcCccccc--ccCCcccccc--------CCCCCeecceEEEEcCCceEEEEeccCCeEEECCEEEC
Confidence 999998 499999 5444432 2222222111 13569999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t 475 (499)
|.+||++|. .+++|.+++|++++++..+ +.++++|++.++...+.+++.+++++ ..+++|+.|.+++++++||+|
T Consensus 454 p~~IE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~---~~l~~~~~P~~i~~v~~lP~t 528 (547)
T PRK13295 454 VVEIEALLY-RHPAIAQVAIVAYPDERLG-ERACAFVVPRPGQSLDFEEMVEFLKA---QKVAKQYIPERLVVRDALPRT 528 (547)
T ss_pred HHHHHHHHH-hCCCeeeEEEEeeecCCCC-cEEEEEEEeCCCCCCCHHHHHHHHHh---ccCccccCCcEEEEeccCCCC
Confidence 999999996 8999999999999988877 89999999887654454555554432 379999999999999999999
Q ss_pred CCcHHHHHHHHHHHHh
Q 010854 476 ASNKLLRRVLRDQIKH 491 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~ 491 (499)
++||++|++|++.+.+
T Consensus 529 ~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 529 PSGKIQKFRLREMLRG 544 (547)
T ss_pred CCccccHHHHHHHHhc
Confidence 9999999999987755
No 24
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-60 Score=499.81 Aligned_cols=436 Identities=19% Similarity=0.214 Sum_probs=352.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++++.+|++......+. .
T Consensus 52 ~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-------------~ 118 (705)
T PRK06060 52 LSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQ-------------P 118 (705)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhc-------------c
Confidence 689999999999999999999999999999999999999999999999999999999875321000 0
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.. .....++...... . .........++++++++|||||||.||||.++|+++...+....
T Consensus 119 ~~-----------------~~~~~~~~~~~~~--~-~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~ 178 (705)
T PRK06060 119 SR-----------------VAEAAELMSEAAR--V-APGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMC 178 (705)
T ss_pred cc-----------------cchhhhhhhhccc--c-CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHH
Confidence 00 0001111111000 0 00011123568999999999999999999999999988765543
Q ss_pred -eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 -AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 -~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+++.++|+++...|++|.+++.. ++.+++.|+++++.+...++..+...++++++|+++++|+++..+++... .
T Consensus 179 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~ 256 (705)
T PRK06060 179 RKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--P 256 (705)
T ss_pred HHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--c
Confidence 3567889999999999999988754 88899999999998766677888899999999999999999999887543 2
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
.+++++|.++++||++++++.+.+.+.+++.++++.||+||++..+..... .....+++|+|+++++++|+|++|++++
T Consensus 257 ~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~~~ 335 (705)
T PRK06060 257 DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRV-DEWRLGTLGRVLPPYEIRVVAPDGTTAG 335 (705)
T ss_pred ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccC-CCCCcCcccccCCCcEEEEECCCCCCCC
Confidence 346899999999999999999999888877899999999999865443322 2234578999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCC-CCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGM-PMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
.|+ .|||+| ++..+.+ |++.+ ....+++||+|||+|+++++|++++.||.||+||++|++|+|.
T Consensus 336 ~g~--~GEl~i~g~~v~~G------------Y~~~~~~~~~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~ 401 (705)
T PRK06060 336 PGV--EGDLWVRGPAIAKG------------YWNRPDSPVANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPR 401 (705)
T ss_pred CCC--ceEEEEccchhhhh------------hhCCCcccccCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHH
Confidence 998 599999 5443332 22111 1123568999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
+||+++. .|++|.+++|+++++...+ +.++++++...+...+.+ ..+.+++++.++|+.|+.|..|+++++||+|++
T Consensus 402 eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~~~a~vv~~~~~~~~~~-~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~ 478 (705)
T PRK06060 402 EVERLII-EDEAVAEAAVVAVRESTGA-STLQAFLVATSGATIDGS-VMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPN 478 (705)
T ss_pred HHHHHHH-hCCCeeEEEEEeecCccCC-eeEEEEEEeccccCcChH-HHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcc
Confidence 9999997 8999999999999988777 889999998765444433 334566667889999999999999999999999
Q ss_pred cHHHHHHHHHHHH
Q 010854 478 NKLLRRVLRDQIK 490 (499)
Q Consensus 478 GKv~r~~l~~~~~ 490 (499)
||++|++|++.+.
T Consensus 479 GKidr~~L~~~~~ 491 (705)
T PRK06060 479 GKLVRGALRKQSP 491 (705)
T ss_pred hhhHHHHHHhhcc
Confidence 9999999998653
No 25
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-61 Score=431.94 Aligned_cols=461 Identities=20% Similarity=0.239 Sum_probs=393.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|.+.+||..+|++++||++++|+++|.--|+....++.+..+.+.++.+|.+... ..++..+.+++....++.
T Consensus 75 i~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~~~~ar~~~a~~~t 153 (542)
T COG1021 75 IKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQH-SGFDYRPFARELVAKHPT 153 (542)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhh-cccCcHHHHHHHHhhCCc
Confidence 6899999999999999999999999999999999899999999999999999999998764 455666777777777777
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.+.++...+.. .....+..+.... .......+.+++++|++..+.||||.||.++.+|..+..++....
T Consensus 154 lr~v~v~ge~~-------~~~~~~~~~~~~a----~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSa 222 (542)
T COG1021 154 LRHVIVAGEAE-------HPSVLEAALCHPA----GLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASA 222 (542)
T ss_pred ceEEEEccCCC-------CcchhhhhhhCcc----ccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehh
Confidence 66666552221 1222233222221 122233456678999999999999999999999999999988888
Q ss_pred eeccCcCCcEEEeecCccccchhhh--hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI--LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
.-+++...++.++.+|..|.+-+.. .++.+++|+++++.+ +.+++..+.+|+++++|+...+|++...|++..+...
T Consensus 223 EiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~ 301 (542)
T COG1021 223 EICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWER 301 (542)
T ss_pred hhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhccc
Confidence 8899999999999999999999875 999999999999987 6788999999999999999999999999999999999
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccC-CCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~g~~~ 318 (499)
.++++||.+-+||..+++...+.+...+ +|.+.+.|||.|.-..++-.......-..+-|+|+ |.-+++|+|++|+++
T Consensus 302 ~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv 380 (542)
T COG1021 302 ADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPV 380 (542)
T ss_pred CCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCC
Confidence 9999999999999999999999998776 89999999999976655433332333446778886 788999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
++|+ +|++-+ +|..+.+ +++.++.+...| +.+|||+|||++++|++|||.+.||.||+|+.+|++|-.+
T Consensus 381 ~pGE--~G~LltRGPYTirG--Yyrap~HNa~aF------~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAe 450 (542)
T COG1021 381 APGE--VGELLTRGPYTIRG--YYRAPEHNARAF------DADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAE 450 (542)
T ss_pred CCCC--cceeeecCCeeeee--eccCchhhhhcc------CcCCceecCceeEecCCceEEEEeeehhhhccccchhhHH
Confidence 9999 599999 6666665 333444444444 5789999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
|||+.|+ .||.|.++++++.+|+-.| ++.|+||+.++.. .+..++++++++ ..++.|++|.+|.+++++|.|+-
T Consensus 451 EvEn~LL-~HP~V~~AAlVampDelLG-EksCAfiv~~~~~-~~~~qlr~~L~~---~GlAa~K~PDrie~v~~~P~T~V 524 (542)
T COG1021 451 EVENLLL-RHPAVHDAALVAMPDELLG-EKSCAFIVVKEPP-LRAAQLRRFLRE---RGLAAFKLPDRIEFVDSLPLTAV 524 (542)
T ss_pred HHHHHHh-hCchhhhhhhhcCchhhcC-cceeEEEEecCCC-CCHHHHHHHHHH---cchhhhcCCcceeecccCCCccc
Confidence 9999998 9999999999999999999 9999999998753 577888888876 58999999999999999999999
Q ss_pred cHHHHHHHHHHHHhh
Q 010854 478 NKLLRRVLRDQIKHE 492 (499)
Q Consensus 478 GKv~r~~l~~~~~~~ 492 (499)
|||+++.|++++...
T Consensus 525 GKIdKk~Lr~~l~~~ 539 (542)
T COG1021 525 GKIDKKALRRRLASR 539 (542)
T ss_pred ccccHHHHHHHhhhh
Confidence 999999999988654
No 26
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-59 Score=483.10 Aligned_cols=465 Identities=21% Similarity=0.249 Sum_probs=360.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++.+|+++.... .+.+.......
T Consensus 72 i~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 145 (562)
T PRK05677 72 LKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAH------LAEKVLPKTGV 145 (562)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhh------hHHHhhhccCc
Confidence 679999999999999999999999999999999999999999999999999999999764321 11111111111
Q ss_pred ceEEecccCCCC-------------------CCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010854 82 KAIVLPAIGNDV-------------------GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGE 142 (499)
Q Consensus 82 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 142 (499)
..+++....... .....+....+.+.+..... .........++++++++|||||||.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~ 221 (562)
T PRK05677 146 KHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGV 221 (562)
T ss_pred ceeEEecccccccchhhhhcccchhhccccccccCCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCC
Confidence 111111100000 00001122334444433221 1111233467999999999999999
Q ss_pred CceEEecchhhHHHhhhcceec--cCcC-CcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCC
Q 010854 143 PKAIPWTQLSSIRCTAEGWAHI--DLKV-GDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGV 218 (499)
Q Consensus 143 pk~v~~s~~~~~~~~~~~~~~~--~~~~-~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~ 218 (499)
||+|+++|+++...+......+ .+.. .+.+++.+|++|.+++.. ++.++..|++.++.+...++..+++.|+++++
T Consensus 222 PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 301 (562)
T PRK05677 222 AKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKF 301 (562)
T ss_pred CcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCc
Confidence 9999999999887665443332 2333 467889999999999864 77788889888877656678899999999999
Q ss_pred eEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccc
Q 010854 219 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGA 298 (499)
Q Consensus 219 t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~ 298 (499)
|++.++|+++..+.........+++++|.+++||+++++++.+.+...+ ++.+++.||+||++..+..... .....++
T Consensus 302 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~ 379 (562)
T PRK05677 302 SGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-QAIQVGT 379 (562)
T ss_pred eEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-cCCCCCc
Confidence 9999999999999876554555678999999999999999988887665 7899999999998876554433 2334578
Q ss_pred ccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceE
Q 010854 299 FSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYI 377 (499)
Q Consensus 299 ~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l 377 (499)
+|.|+++++++|+|+++++++.|+ .|||++ ++..+.+ ++.+++.+...| .+++||+|||+|+++++|++
T Consensus 380 vG~~~~~~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~------~~~g~~~TGDlg~~~~~G~l 449 (562)
T PRK05677 380 IGIPVPSTLCKVIDDDGNELPLGE--VGELCVKGPQVMKG--YWQRPEATDEIL------DSDGWLKTGDIALIQEDGYM 449 (562)
T ss_pred cCccCCCCEEEEECCCCCCCCCCC--CeEEEEecCccchh--hcCCchhhhhcc------CCCCcccccceEEECCCCcE
Confidence 999999999999999999999998 599999 5544432 233333333333 34679999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 010854 378 IVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 378 ~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l 457 (499)
++.||.+|+|+++|.+|+|.+||++|. .+++|.+++|++++++..+ +.++++++..++...+.+++.++ +++.|
T Consensus 450 ~i~GR~~d~i~~~G~~i~p~eiE~~l~-~~~~v~~~~v~g~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l 523 (562)
T PRK05677 450 RIVDRKKDMILVSGFNVYPNELEDVLA-ALPGVLQCAAIGVPDEKSG-EAIKVFVVVKPGETLTKEQVMEH----MRANL 523 (562)
T ss_pred EEEecCcCeEEeCCEEECHHHHHHHHH-hCCCccEEEEEeccCccCC-ceEEEEEEeCCCCCCCHHHHHHH----HHHhh
Confidence 999999999999999999999999996 9999999999999988777 88899998876655666666665 45678
Q ss_pred CCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhh
Q 010854 458 NPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 458 ~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
++|+.|..++++++||+|++||++|++|++++.++..
T Consensus 524 ~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~~~ 560 (562)
T PRK05677 524 TGYKVPKAVEFRDELPTTNVGKILRRELRDEELKKAG 560 (562)
T ss_pred hhccCCcEEEEeccCCCCCcccccHHHHHHHHHHhcc
Confidence 8999999999999999999999999999998877654
No 27
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.8e-60 Score=494.20 Aligned_cols=465 Identities=15% Similarity=0.117 Sum_probs=343.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC-C
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~ 80 (499)
+++||+|+|+++|+++|++++|||+++|+++||+++.++++++.+++++++++++|++.+... .+....... .
T Consensus 101 v~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~------~~~~~~~~~~~ 174 (666)
T PLN02614 101 VKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKIS------ELFKTCPNSTE 174 (666)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHH------HHHHhcccccc
Confidence 689999999999999999999999999999999999999999999999999999999874321 111111111 1
Q ss_pred CceEEecccCCCCCC-----CCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 81 LKAIVLPAIGNDVGI-----PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
....++......... .......++++++...... ........++|+++|+|||||||.||||++||+++..
T Consensus 175 ~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~ 250 (666)
T PLN02614 175 YMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGK----QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVT 250 (666)
T ss_pred cceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccC----CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHH
Confidence 111122111110000 0011124566665543210 0111224579999999999999999999999999988
Q ss_pred Hhhhccee-----ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 156 CTAEGWAH-----IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 156 ~~~~~~~~-----~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
.+...... .++.++|++++++|++|.++....+.+++.|+++++.+ .++..+++.|++++||+++++|++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~ 328 (666)
T PLN02614 251 LIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDR 328 (666)
T ss_pred HHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHH
Confidence 76654433 25788999999999999998866666788999998875 367899999999999999999999998
Q ss_pred HHccCCC---------------------------------Cc-----------ccc-cceeEEEeecCCCChhhHHHHHh
Q 010854 231 WRNTNCL---------------------------------EG-----------LDW-TKIRSFASTGETSNVDDDLWLSS 265 (499)
Q Consensus 231 l~~~~~~---------------------------------~~-----------~~l-~~l~~i~~~G~~l~~~~~~~~~~ 265 (499)
+.+.... .. ..+ +++|.+++||+++++.+. .+..
T Consensus 329 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~-~~~~ 407 (666)
T PLN02614 329 VYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVE-SFLR 407 (666)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHH-HHHH
Confidence 7642100 00 011 589999999999998764 4445
Q ss_pred hcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CC--CCCCCCCCCcceeeEe-ccccccccccc
Q 010854 266 KAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-EC--GVPYPDDQPCVGEVGL-FPLYLGASDRL 341 (499)
Q Consensus 266 ~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~--g~~~~~g~~~~Gei~v-~~~~~~~~~~~ 341 (499)
.+.++.+++.||+||+++..+..........+++|+|+|+++++|+| ++ +.+++.|+ .|||+| ++..+.+ ++
T Consensus 408 ~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~--~GEl~vrGp~v~~G--Y~ 483 (666)
T PLN02614 408 VVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTP--RGEICIRGKTLFSG--YY 483 (666)
T ss_pred HhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCC--CceEEEcCCccccc--cc
Confidence 55568899999999987644433332223468999999999999997 33 46788888 499999 6665543 34
Q ss_pred ccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEeCC
Q 010854 342 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSP 420 (499)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~ 420 (499)
.+++.+...|. ++||+|||+|++|+||+|+|+||.||+||. +|++|+|.+||++|. .||+|.+++|++...
T Consensus 484 ~~pe~T~~~f~-------dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~~~V~g~~~ 555 (666)
T PLN02614 484 KREDLTKEVLI-------DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG-EVQAVDSVWVYGNSF 555 (666)
T ss_pred CCHHHhhhhhc-------cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHh-cCCCeeEEEEEecCC
Confidence 44444444342 479999999999999999999999999995 799999999999996 999999999998753
Q ss_pred CCCCceEEEEEEEecCCC----------CCC------HHHHHHHHHHHH-----HhhcCCceeeeEEEEcCC-C-----C
Q 010854 421 AGGGPEVLVIFVVLKKGF----------TSQ------PDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPE-F-----P 473 (499)
Q Consensus 421 ~~~~~~~~~~~v~~~~~~----------~~~------~~~l~~~~~~~~-----~~~l~~~~~p~~~~~~~~-i-----P 473 (499)
. ..++|+|++.... ..+ ..++++.+.+.+ +++|+.|.++++|.++++ + -
T Consensus 556 ~----~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~ 631 (666)
T PLN02614 556 E----SFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDL 631 (666)
T ss_pred c----ceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCc
Confidence 2 5688999876421 101 122333333333 467999999999998863 3 3
Q ss_pred CCCCcHHHHHHHHHHHHhhhhh
Q 010854 474 RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 474 ~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
+|+++|+.|..+.+.|++++++
T Consensus 632 lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 632 LTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred CCHhhhhhHHHHHHHHHHHHHH
Confidence 7999999999999999998875
No 28
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-59 Score=481.72 Aligned_cols=444 Identities=18% Similarity=0.163 Sum_probs=355.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++.+|++.... ..+.........
T Consensus 90 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~ 163 (537)
T PRK13382 90 IGEPRVVGIMCRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQ 163 (537)
T ss_pred CCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccc
Confidence 67999999999999999999999999999999999999999999999999999999987532 111221111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++..... .....++++...... . .....+++.++++|||||||.||+|.++|.++........
T Consensus 164 ~~~~~~~~~~-------~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~ 229 (537)
T PRK13382 164 ATRIVAWTDE-------DHDLTVEVLIAAHAG-----Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAIL 229 (537)
T ss_pred cceEEEecCC-------cccccHHHHhhccCc-----C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHH
Confidence 1111111010 112344444432211 0 1112467899999999999999999999988887777766
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC--Cc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~ 239 (499)
..+.+..+++++...|++|.+++..++.++..|+++++.. .++++.+++.|+++++|++.++|++++.|++.... ..
T Consensus 230 ~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 308 (537)
T PRK13382 230 DRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNR 308 (537)
T ss_pred HhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhccc
Confidence 6677889999999999999999877889999999988875 66889999999999999999999999999876432 23
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
.+++++|.++++|+++++++...+.+.+ +..+++.||+||++..+..+........+++|+|++++.++|+|+++++++
T Consensus 309 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~ 387 (537)
T PRK13382 309 YSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVP 387 (537)
T ss_pred CCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCC
Confidence 4567899999999999999999888776 567999999999987655443333345679999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ .||+++ ++..+.++. ++.+.. ..++||+|||+++++++|++++.||.||+||++|++|+|.+
T Consensus 388 ~g~--~GEl~v~g~~~~~gY~----~~~~~~--------~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~e 453 (537)
T PRK13382 388 TGE--VGTIFVRNDTQFDGYT----SGSTKD--------FHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIE 453 (537)
T ss_pred CCC--eeEEEEEcCCcccCcc----ccchhh--------ccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHH
Confidence 998 599999 655554321 111111 12479999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||++|. .+|+|.+++|++.+++..+ +.++++|++.++...+.+++.+ ++++.|+.|+.|..+++++++|+|++|
T Consensus 454 IE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~vv~~~~~~~~~~~l~~----~l~~~l~~~~~P~~i~~v~~lP~t~~g 527 (537)
T PRK13382 454 VEKTLA-THPDVAEAAVIGVDDEQYG-QRLAAFVVLKPGASATPETLKQ----HVRDNLANYKVPRDIVVLDELPRGATG 527 (537)
T ss_pred HHHHHH-hCCCEeeEEEEccCccccC-CEEEEEEEECCCCCCCHHHHHH----HHHHhccCCCCCcEEEEeccCCCCCCC
Confidence 999996 8999999999999988777 8899999987765445444444 466789999999999999999999999
Q ss_pred HHHHHHHHH
Q 010854 479 KLLRRVLRD 487 (499)
Q Consensus 479 Kv~r~~l~~ 487 (499)
|++|++|++
T Consensus 528 K~~r~~L~~ 536 (537)
T PRK13382 528 KILRRELQA 536 (537)
T ss_pred CCcHHhhCC
Confidence 999999864
No 29
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=5e-59 Score=478.36 Aligned_cols=454 Identities=22% Similarity=0.251 Sum_probs=363.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++++|+++... ..+....... .
T Consensus 72 ~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~-~ 144 (537)
T PLN02246 72 IRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDD-G 144 (537)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcC-C
Confidence 68999999999999999999999999999999999999999999999999999999987532 1111111111 1
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
. .++..... ......+.++..... .........++++++++|||||||.||+|+++|+++...+....
T Consensus 145 ~-~~i~~~~~------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~ 212 (537)
T PLN02246 145 V-TVVTIDDP------PEGCLHFSELTQADE-----NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV 212 (537)
T ss_pred c-eEEEeCCC------CCCceeHHHHhcCCC-----CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHh
Confidence 1 11211111 122344555443221 11122335678999999999999999999999999987766543
Q ss_pred e----eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCC
Q 010854 162 A----HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 236 (499)
Q Consensus 162 ~----~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 236 (499)
. .+.++++|+++..+|++|.+++.. ++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|++...
T Consensus 213 ~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 291 (537)
T PLN02246 213 DGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP-KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPV 291 (537)
T ss_pred hccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC-CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcc
Confidence 2 467899999999999999999866 778899999999997 4678899999999999999999999999988766
Q ss_pred CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC----CCCCccccccccCCCceEEEEC
Q 010854 237 LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD 312 (499)
Q Consensus 237 ~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~i~d 312 (499)
....+++++|.++++|+.+++++.+.+.+.+++..+++.||+||++.++..+.. ......+++|+|+++++++|+|
T Consensus 292 ~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d 371 (537)
T PLN02246 292 VEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVD 371 (537)
T ss_pred ccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEec
Confidence 666678899999999999999999999988878889999999999865443211 1123456899999999999999
Q ss_pred -CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeC
Q 010854 313 -ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 390 (499)
Q Consensus 313 -~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~ 390 (499)
+++++++.|+. |||++ ++..+.+ ++.++..+...+ ..++||+|||+++++++|++++.||.+|+||.+
T Consensus 372 ~~~~~~~~~g~~--Gel~v~g~~~~~G--Y~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~ 441 (537)
T PLN02246 372 PETGASLPRNQP--GEICIRGPQIMKG--YLNDPEATANTI------DKDGWLHTGDIGYIDDDDELFIVDRLKELIKYK 441 (537)
T ss_pred CCCCCcCCCCCc--eEEEEECCchhcc--ccCCchhhhhcc------cCCCCeeecceEEEeCCCeEEEEecccceEEEC
Confidence 68999999984 99999 5554433 222222222222 346799999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
|++|+|.+||+++. .+|+|.+++|++.+++..+ +.++++++..++...+.+++.++ ++++|+.|+.|.++++++
T Consensus 442 G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----l~~~l~~~~~p~~i~~~~ 515 (537)
T PLN02246 442 GFQVAPAELEALLI-SHPSIADAAVVPMKDEVAG-EVPVAFVVRSNGSEITEDEIKQF----VAKQVVFYKRIHKVFFVD 515 (537)
T ss_pred CEEECcHHHHHHHH-hCCCeeEEEEEcccCccCC-ceeEEEEEeCCCCCCCHHHHHHH----HHhhCcCccccceEEEec
Confidence 99999999999996 8999999999999888777 88999999887655555555444 667899999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHh
Q 010854 471 EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 471 ~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++|+|++||++|++|+++++.
T Consensus 516 ~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 516 SIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred cCCCCCcchhhHHHHHHHHhc
Confidence 999999999999999988753
No 30
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.9e-59 Score=479.95 Aligned_cols=463 Identities=20% Similarity=0.223 Sum_probs=366.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+|+++.... .+.........
T Consensus 58 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 131 (546)
T PRK08314 58 VRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAP------KVAPAVGNLRL 131 (546)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhh------hHHHHhhccCc
Confidence 679999999999999999999999999999999999999999999999999999999875431 11111111111
Q ss_pred ceEEecccCCC------------------CCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010854 82 KAIVLPAIGND------------------VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEP 143 (499)
Q Consensus 82 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~p 143 (499)
..++....... .......+...|++...... ........++++++++|||||||.|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGtTG~P 205 (546)
T PRK08314 132 RHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGL------APPPHTAGPDDLAVLPYTSGTTGVP 205 (546)
T ss_pred ceEEEecchhhcccccccCcccccccccccccccccccccHHHHhcccC------CCCCCCCCCCCeEEEEeCCCCCCCC
Confidence 11111100000 00001123345665554321 1122345678999999999999999
Q ss_pred ceEEecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 144 KAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 144 k~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
|+|.++|+++...+......+++..+|++++.+|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|++.
T Consensus 206 K~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~ 284 (546)
T PRK08314 206 KGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWT 284 (546)
T ss_pred cEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceec
Confidence 9999999999998887777788899999999999999999865 889999999999997 45788899999999999999
Q ss_pred cchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccccccc
Q 010854 223 TVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA 302 (499)
Q Consensus 223 ~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~ 302 (499)
++|+++..++........+++++|.++++|+++++++.+++...+ +.++++.||+||++......... ....+++|.|
T Consensus 285 ~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~ 362 (546)
T PRK08314 285 NIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD-RPKLQCLGIP 362 (546)
T ss_pred ccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecccccccccceecCCCc-CCCCCccCcc
Confidence 999999999887665666788999999999999999999988776 68899999999998755443322 2345789999
Q ss_pred CCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEe
Q 010854 303 TMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQ 380 (499)
Q Consensus 303 ~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~ 380 (499)
+++++++|+| +++.+++.|+ .||+++ ++..+.+ ++.++..+...|.. ..+.+||+|||+|+++++|++++.
T Consensus 363 ~~g~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~f~~---~~~~~~~~TGDl~~~~~~g~l~~~ 435 (546)
T PRK08314 363 TFGVDARVIDPETLEELPPGE--VGEIVVHGPQVFKG--YWNRPEATAEAFIE---IDGKRFFRTGDLGRMDEEGYFFIT 435 (546)
T ss_pred cCCeEEEEEeCCCCcCCCCCC--ceEEEEECCchhcc--ccCChhHhhhhhhh---cCCCceEecCCEEEEcCCCcEEEE
Confidence 9999999999 6799999998 599999 5443332 22223322222221 235579999999999999999999
Q ss_pred cccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCC--CCHHHHHHHHHHHHHhhcC
Q 010854 381 GRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLN 458 (499)
Q Consensus 381 gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~~~l~ 458 (499)
||.||+++++|++|+|.+||+++. .+|+|.+++|++.++...+ +.+++++++.++.. .+.+ .+++++++.|+
T Consensus 436 GR~~d~i~~~G~~v~~~eIE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~----~l~~~~~~~l~ 509 (546)
T PRK08314 436 DRLKRMINASGFKVWPAEVENLLY-KHPAIQEACVIATPDPRRG-ETVKAVVVLRPEARGKTTEE----EIIAWAREHMA 509 (546)
T ss_pred ecchhhEEeCCEEECHHHHHHHHH-hCcchheEEEEeCCCcccC-ceeEEEEEECCCCCCCCCHH----HHHHHHHHhcc
Confidence 999999999999999999999996 8999999999999988777 88999999877543 2233 44555667899
Q ss_pred CceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 459 PLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 459 ~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+|+.|..++++++||+|.+||++|+.|++..+..
T Consensus 510 ~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 510 AYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred cCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 9999999999999999999999999998876654
No 31
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-59 Score=475.98 Aligned_cols=459 Identities=20% Similarity=0.202 Sum_probs=359.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+++++..+++.++++.+++++.+. +....+......
T Consensus 61 ~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 134 (539)
T PRK07008 61 VEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPN 134 (539)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCC
Confidence 68999999999999999999999999999999999999999999999999999999987542 222222222222
Q ss_pred c-eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHh--h
Q 010854 82 K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--A 158 (499)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~--~ 158 (499)
. .++........... .....+++++...... ........+++++.++|||||||.||+|+++|+++.... .
T Consensus 135 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~ 208 (539)
T PRK07008 135 VKGWVAMTDAAHLPAG-STPLLCYETLVGAQDG-----DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGA 208 (539)
T ss_pred ceEEEEEccCCccccC-CcccccHHHHhcccCC-----CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHh
Confidence 1 11111111111111 1234566776543221 111223457889999999999999999999999986432 2
Q ss_pred hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
.....++++++|+++...|++|.+++...+.++..|+++++.+..++++.+++.++++++|++.++|+++..|++.....
T Consensus 209 ~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~ 288 (539)
T PRK07008 209 ALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA 288 (539)
T ss_pred hcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc
Confidence 33346778899999999999998887667888999999999876678899999999999999999999999999877666
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----------CCccccccccCCCceE
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGL 308 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~ 308 (499)
..+++++|.++++|+++++.+.+.++..+ +..+++.||+||++.....+.... .....++|+|+|++++
T Consensus 289 ~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~ 367 (539)
T PRK07008 289 GLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDM 367 (539)
T ss_pred CCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEE
Confidence 67788999999999999999999988776 788999999999986543332110 0124678999999999
Q ss_pred EEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCee
Q 010854 309 VILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM 387 (499)
Q Consensus 309 ~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i 387 (499)
+|+|+++++++.+...+|||++ ++....+ +..++. .+.. ++||+|||++++++||++++.||.+|++
T Consensus 368 ~i~d~~~~~~~~~~~~~Gei~v~g~~~~~g--y~~~~~--------~~~~--~g~~~TGD~~~~~~dg~l~~~GR~~d~i 435 (539)
T PRK07008 368 KIVGDDGRELPWDGKAFGDLQVRGPWVIDR--YFRGDA--------SPLV--DGWFPTGDVATIDADGFMQITDRSKDVI 435 (539)
T ss_pred EEECCCCCccCCCCCcceEEEEeCCccchh--hcCChh--------hhhc--CCCcccCceEEEcCCCcEEEeecccCEE
Confidence 9999999888765323599999 4333221 111110 1111 4699999999999999999999999999
Q ss_pred eeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEE
Q 010854 388 NLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVK 467 (499)
Q Consensus 388 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~ 467 (499)
+.+|.+|+|.+||+++. .+|.|.++++++.++...+ +.++++|+..++...+.+++.++ ++++|++|+.|..++
T Consensus 436 ~~~G~~v~p~eIE~~l~-~~p~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~P~~i~ 509 (539)
T PRK07008 436 KSGGEWISSIDIENVAV-AHPAVAEAACIACAHPKWD-ERPLLVVVKRPGAEVTREELLAF----YEGKVAKWWIPDDVV 509 (539)
T ss_pred EeCCeEEcHHHHHHHHH-hCCceeEEEEEecCCchhc-cceEEEEEeCCCCccCHHHHHHH----HHhhcccccCCeEEE
Confidence 99999999999999996 8999999999999987777 78888888776655555555555 556889999999999
Q ss_pred EcCCCCCCCCcHHHHHHHHHHHHh
Q 010854 468 VVPEFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 468 ~~~~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++++||+|++||++|++|++++.+
T Consensus 510 ~v~~lP~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 510 FVDAIPHTATGKLQKLKLREQFRD 533 (539)
T ss_pred EecCCCCCCccceeHHHHHHHHHh
Confidence 999999999999999999998875
No 32
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-59 Score=473.65 Aligned_cols=435 Identities=20% Similarity=0.229 Sum_probs=349.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCc
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK 82 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (499)
.+||+|+|+++|++++++++|||+++|++++|+++.++++++.++++.++++.+|++...... +. . . .
T Consensus 48 ~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~------~~---~-~-~- 115 (487)
T PRK07638 48 SKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLND------LP---D-E-E- 115 (487)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccc------hh---h-c-c-
Confidence 479999999999999999999999999999999999999999999999999999998743211 10 0 0 0
Q ss_pred eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce
Q 010854 83 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA 162 (499)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~ 162 (499)
..++.. ..+.+....... .........+++++++|||||||.||+|+++|+++...+.....
T Consensus 116 ~~~~~~-------------~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~ 177 (487)
T PRK07638 116 GRVIEI-------------DEWKRMIEKYLP-----TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVH 177 (487)
T ss_pred ceEEEe-------------hhhhhhhhhccc-----cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH
Confidence 011110 011111111110 11111223577899999999999999999999999888887777
Q ss_pred eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcccc
Q 010854 163 HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDW 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l 242 (499)
.++++.+|+++...|++|..++..++.+++.|+++++.+ .+++..+++.++++++|++.++|+++..|.+... . .
T Consensus 178 ~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~ 252 (487)
T PRK07638 178 DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-I 252 (487)
T ss_pred hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-C
Confidence 788999999999999999988777889999999999886 5688999999999999999999999999988732 1 3
Q ss_pred cceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCCC
Q 010854 243 TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQ 322 (499)
Q Consensus 243 ~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~ 322 (499)
.+.+.++++|+.++.+...++...+++..+++.||+||++..+............++|.|++++.++|+|+.|.+++.|+
T Consensus 253 ~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~ 332 (487)
T PRK07638 253 ENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGE 332 (487)
T ss_pred CceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCC
Confidence 45566778888999999999998888899999999999997665554434445679999999999999999999999998
Q ss_pred CcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHH
Q 010854 323 PCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 401 (499)
Q Consensus 323 ~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~ 401 (499)
.|||+| ++..+.+ ++.++..+.. ...++||+|||++++|++|++++.||.+|+||++|.+|+|.+||+
T Consensus 333 --~Gel~v~~~~~~~g--y~~~~~~~~~-------~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~ 401 (487)
T PRK07638 333 --IGTVYVKSPQFFMG--YIIGGVLARE-------LNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIES 401 (487)
T ss_pred --CeEEEEecccceee--ecCCHHHHhh-------hccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHH
Confidence 599999 4443332 2222221111 134679999999999999999999999999999999999999999
Q ss_pred HHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHH
Q 010854 402 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLL 481 (499)
Q Consensus 402 ~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~ 481 (499)
++. .+|+|.+++|++.+++..+ +.++++++. ..+.+++.+ ++.++++.|+.|..++++++||+|++||++
T Consensus 402 ~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~----~~~~~~l~~----~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~ 471 (487)
T PRK07638 402 VLH-EHPAVDEIVVIGVPDSYWG-EKPVAIIKG----SATKQQLKS----FCLQRLSSFKIPKEWHFVDEIPYTNSGKIA 471 (487)
T ss_pred HHH-hCCCeeeEEEEecCchhcC-CeeEEEEEC----CCCHHHHHH----HHHHHhhcccCCcEEEEecccCCCCccccc
Confidence 997 8999999999999988777 788888764 234444444 456788899999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 010854 482 RRVLRDQIKHEL 493 (499)
Q Consensus 482 r~~l~~~~~~~~ 493 (499)
|++|++++.++.
T Consensus 472 r~~L~~~~~~~~ 483 (487)
T PRK07638 472 RMEAKSWIENQE 483 (487)
T ss_pred HHHHHHHHhccc
Confidence 999998887653
No 33
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=8.5e-59 Score=478.45 Aligned_cols=460 Identities=16% Similarity=0.151 Sum_probs=351.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc-CC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-AP 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~ 80 (499)
+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++... ........ ..
T Consensus 63 ~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-------~~~~~~~~~~~ 135 (552)
T PRK09274 63 IGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-------LARRLFGWGKP 135 (552)
T ss_pred CCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-------HHHHHhccCcc
Confidence 68999999999999999999999999999999999999999999999999999999865210 00000000 00
Q ss_pred CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 81 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
....++..... .......+.++...... .........++++++++|||||||.||+|+++|+++...+...
T Consensus 136 ~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 206 (552)
T PRK09274 136 SVRRLVTVGGR-----LLWGGTTLATLLRDGAA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEAL 206 (552)
T ss_pred chhheeccccc-----cccCCccHHHhcccCcc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHH
Confidence 11111111100 01122345554422111 1122233567899999999999999999999999999888877
Q ss_pred ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC------CCChhHHHHHHHHhCCeEEecchHHHHHHHcc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 234 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~------~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 234 (499)
...+++.++++.+..+|++|.+++ ..|+++++.+. ..+++.+++.|+++++|+++++|++++.|.+.
T Consensus 207 ~~~~~~~~~~~~~~~~pl~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 279 (552)
T PRK09274 207 REDYGIEPGEIDLPTFPLFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRY 279 (552)
T ss_pred HHHhCCCCCceeeeccCHHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHH
Confidence 777889999999999998876443 45777776542 34678999999999999999999999999987
Q ss_pred CCCCcccccceeEEEeecCCCChhhHHHHHhhcc-cCceeccccccceeeeeecCCCC---------CCCccccccccCC
Q 010854 235 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATM 304 (499)
Q Consensus 235 ~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~~~~~---------~~~~~~~~g~~~~ 304 (499)
....+.+++++|.++++|+++++++.+.+.+.++ ++++++.||+||++.+....... ......++|+|+|
T Consensus 280 ~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~ 359 (552)
T PRK09274 280 GEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVD 359 (552)
T ss_pred hhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCC
Confidence 6666678899999999999999999999998876 37899999999998755433211 1112347899999
Q ss_pred CceEEEECC---------CCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecC
Q 010854 305 TAGLVILDE---------CGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 305 ~~~~~i~d~---------~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 374 (499)
+++++|+|. ++++++.|+ +|||+| ++..+.+ ++.+++.+...+... ..+..||+|||+|++|++
T Consensus 360 ~~~~~ivd~~~~~~~~~~~~~~~~~g~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~~~~--~~g~~w~~TGDlg~~d~d 433 (552)
T PRK09274 360 GVEVRIIAISDAPIPEWDDALRLATGE--IGEIVVAGPMVTRS--YYNRPEATRLAKIPD--GQGDVWHRMGDLGYLDAQ 433 (552)
T ss_pred CceEEEEeccccccccccccccCCCCC--eeEEEEecCccccc--ccCChHHhhhhhccc--CCCCcEEEcCCEEEEccC
Confidence 999999983 567888888 599999 5544432 222333222221100 012249999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ 454 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 454 (499)
|+++++||.||+|+++|++|+|.+||++|. .||+|.+++|++++++. + +.++++|++.++...+.+++.+.+++.+.
T Consensus 434 G~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 510 (552)
T PRK09274 434 GRLWFCGRKAHRVETAGGTLYTIPCERIFN-THPGVKRSALVGVGVPG-A-QRPVLCVELEPGVACSKSALYQELRALAA 510 (552)
T ss_pred CcEEEEeccCCeEEECCEEECcHHHHHHHH-hCcccceeEEEEeCCCC-C-ceEEEEEEccCccccchHHHhhhhHHHHH
Confidence 999999999999999999999999999996 89999999999998753 4 78889999888766666678888877664
Q ss_pred hhcCCceeeeEEEEcCCCCCC--CCcHHHHHHHHHHHHhhhh
Q 010854 455 SKLNPLFKVSLVKVVPEFPRT--ASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 455 ~~l~~~~~p~~~~~~~~iP~t--~~GKv~r~~l~~~~~~~~~ 494 (499)
....++.|..++++++||+| ++|||+|++|++++++++.
T Consensus 511 -~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~~~ 551 (552)
T PRK09274 511 -AHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQLK 551 (552)
T ss_pred -hcCCCcceeEEeccCCCCccccccccccHHHHHHHHHHhhc
Confidence 34556788899999999999 7999999999999887653
No 34
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8.2e-59 Score=484.67 Aligned_cols=464 Identities=19% Similarity=0.133 Sum_probs=341.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCC-
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP- 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~- 80 (499)
+++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+.......+
T Consensus 99 v~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~ 172 (660)
T PLN02861 99 VNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSS 172 (660)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCC
Confidence 78999999999999999999999999999999999999999999999999999999976432 11111112111
Q ss_pred CceEEecccCCCCC-----CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 81 LKAIVLPAIGNDVG-----IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 81 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
....++........ ........++.++...... ........++|+++|+|||||||.||||++||++++.
T Consensus 173 ~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~ 247 (660)
T PLN02861 173 NLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSL-----DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIA 247 (660)
T ss_pred CCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcc-----cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHH
Confidence 11222221111000 0001123456666543321 0111234679999999999999999999999999988
Q ss_pred Hhhhcceecc-----CcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 156 CTAEGWAHID-----LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 156 ~~~~~~~~~~-----~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
.+......++ +.++|++++++|++|.++....+.+++.|+++++.. .++..+++.|++++||+++++|++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~ 325 (660)
T PLN02861 248 EVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDR 325 (660)
T ss_pred HHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHH
Confidence 7765544332 467899999999999999876566899999998874 467899999999999999999999998
Q ss_pred HHccC-------------------------------------CCCcc-------cc-cceeEEEeecCCCChhhHHHHHh
Q 010854 231 WRNTN-------------------------------------CLEGL-------DW-TKIRSFASTGETSNVDDDLWLSS 265 (499)
Q Consensus 231 l~~~~-------------------------------------~~~~~-------~l-~~l~~i~~~G~~l~~~~~~~~~~ 265 (499)
+.+.. ..... .+ +++|.+++||+++++++.+++ .
T Consensus 326 l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~-~ 404 (660)
T PLN02861 326 IYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFL-R 404 (660)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHH-H
Confidence 86410 00000 11 579999999999999976544 4
Q ss_pred hcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC--CCC-CCCCCCCCcceeeEe-ccccccccccc
Q 010854 266 KAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-FPLYLGASDRL 341 (499)
Q Consensus 266 ~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d--~~g-~~~~~g~~~~Gei~v-~~~~~~~~~~~ 341 (499)
.+....+++.||+||+++..+..........+++|+|+|+++++|+| +.| .....+. .|||+| ++..+.+ ++
T Consensus 405 ~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~--~GEi~vrGp~v~~G--Y~ 480 (660)
T PLN02861 405 VTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVP--RGEICLRGNTLFSG--YH 480 (660)
T ss_pred HHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCC--ceeEEEcCCccccc--cc
Confidence 55345799999999987654433322223468999999999999997 444 2333444 499999 6655553 34
Q ss_pred ccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEeCC
Q 010854 342 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSP 420 (499)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~ 420 (499)
.+++.+...|. ++||+|||+|++|+||+|+|+||.||+||. +|++|+|.+||+++. .||.|.+++|++.+
T Consensus 481 ~~pe~T~~~f~-------dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~p~V~~a~V~G~~- 551 (660)
T PLN02861 481 KRQDLTEEVLI-------DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RCPLIASIWVYGNS- 551 (660)
T ss_pred CCHHHHHhhhh-------ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cCCCeeEEEEEecC-
Confidence 44554444442 579999999999999999999999999996 899999999999996 89999999999876
Q ss_pred CCCCceEEEEEEEecCCC----------CCCHH------HHHHHHHHHHHh-----hcCCceeeeEEEEcC-CC-----C
Q 010854 421 AGGGPEVLVIFVVLKKGF----------TSQPD------KLKMIFSKAIQS-----KLNPLFKVSLVKVVP-EF-----P 473 (499)
Q Consensus 421 ~~~~~~~~~~~v~~~~~~----------~~~~~------~l~~~~~~~~~~-----~l~~~~~p~~~~~~~-~i-----P 473 (499)
.+ +.++|+|++.... ..+.. ++...+.+.+++ .+..|.+++++.+++ ++ .
T Consensus 552 --~~-~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~ 628 (660)
T PLN02861 552 --FE-SFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDL 628 (660)
T ss_pred --Cc-ceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCc
Confidence 23 7789999876320 01111 122333333432 589999999998865 55 7
Q ss_pred CCCCcHHHHHHHHHHHHhhhhh
Q 010854 474 RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 474 ~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
+|+++|+.|+.+.+.|++++++
T Consensus 629 lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 629 ITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred CCHHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999998875
No 35
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.7e-59 Score=489.91 Aligned_cols=457 Identities=19% Similarity=0.199 Sum_probs=344.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++++++.+++++++++++|++.+......... .......
T Consensus 252 ~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~ 327 (718)
T PRK08043 252 SVEGERIGLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQ 327 (718)
T ss_pred cCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhcc
Confidence 478999999999999999999999999999999999999999999999999999999876432110000 0001111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHH--hcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDF--LSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
...+...... ....+.+. ...... .. ........++|+++++|||||||.||||+++|.++...+..
T Consensus 328 ~~~i~~~~~~--------~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~ 396 (718)
T PRK08043 328 VRWVYLEDLK--------DDVTTADKLWIFAHLL--MP-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQ 396 (718)
T ss_pred ccEEEhhhhh--------hhcchhHHHHHHHHHh--CC-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHH
Confidence 1111111000 00011110 000000 00 00112345799999999999999999999999999988877
Q ss_pred cceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
....++++++|++++.+|++|.+++.. ++.+++.|+++++.+.......+.+.++++++|++.++|+++..+.+.. .
T Consensus 397 ~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~ 474 (718)
T PRK08043 397 IKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--N 474 (718)
T ss_pred HHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--C
Confidence 777778899999999999999999865 8899999999998875456677889999999999999999998886642 2
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCC
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
..+++++|.++++|+++++++.+.+...+ ++.+++.||+||++........ .....+++|+|+|+++++++|+++.
T Consensus 475 ~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~-- 550 (718)
T PRK08043 475 PYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI-- 550 (718)
T ss_pred cccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC--
Confidence 45678999999999999999999888766 7889999999999865544332 2345689999999999999997653
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchh-hcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeech
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVY-FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 396 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~ 396 (499)
++ .||+++ ++..+.++....+++..... .........++||+|||+|++|+||++++.||.||+||++|++|+|
T Consensus 551 --~~--~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p 626 (718)
T PRK08043 551 --EQ--GGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSL 626 (718)
T ss_pred --CC--ceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCH
Confidence 33 399999 55544432211111110000 0001111235899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhh-cCCceeeeEEEEcCCCCCC
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK-LNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~p~~~~~~~~iP~t 475 (499)
.|||+++. .++.+.++++++.+++..+ +.+++++. +...+.+++.++ ++++ |+.|+.|..+++++++|+|
T Consensus 627 ~eIE~~l~-~~~~~~~~avv~~~~~~~g-e~~v~~~~---~~~~~~~~l~~~----~~~~~l~~~~vP~~i~~v~~lP~t 697 (718)
T PRK08043 627 EMVEQLAL-GVSPDKQHATAIKSDASKG-EALVLFTT---DSELTREKLQQY----AREHGVPELAVPRDIRYLKQLPLL 697 (718)
T ss_pred HHHHHHHH-hCCccceEEEEEccCCCCC-ceEEEEEc---CcccCHHHHHHH----HHhcCCCcccCCceEEEecccCcC
Confidence 99999996 7887888888998888777 77777764 223455555555 4444 9999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhh
Q 010854 476 ASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~~ 492 (499)
++||++|++|++++.+.
T Consensus 698 ~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 698 GSGKPDFVTLKSMVDEP 714 (718)
T ss_pred CCCCcCHHHHHHHHhcc
Confidence 99999999999988664
No 36
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=6e-58 Score=468.87 Aligned_cols=460 Identities=21% Similarity=0.224 Sum_probs=363.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++++++++... ..+.........
T Consensus 47 ~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~ 120 (515)
T TIGR03098 47 LARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHD 120 (515)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccc
Confidence 57899999999999999999999999999999999999999999999999999999987432 111222222111
Q ss_pred --ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 82 --KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
..+.+...... .........|+++...... ........+++++++|||||||.||+|.++|.++...+..
T Consensus 121 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~ 192 (515)
T TIGR03098 121 LRTLILVGEPAHA--SEGGGESPSWPKLLALGDA------DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQS 192 (515)
T ss_pred cceEEEecCcccc--cCCccccccHHHhhccccc------cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHH
Confidence 12222211110 0112233456665443221 1222345689999999999999999999999999988877
Q ss_pred cceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
....+.++.+|++++.+|++|.+++..++.++..|+++++.+ ..+++.+++.++++++|++.++|+++..|.+.... .
T Consensus 193 ~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~ 270 (515)
T TIGR03098 193 VATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-E 270 (515)
T ss_pred HHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-C
Confidence 777778899999999999999999988999999999999886 56789999999999999999999999999875322 2
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
.+++++|.++++|+++++.+.+.++..+++..+++.||+||++..............+++|+|+++++++|+|+++++++
T Consensus 271 ~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~ 350 (515)
T TIGR03098 271 SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECA 350 (515)
T ss_pred CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCC
Confidence 45679999999999999999999998887788999999999876544333223345689999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCC-----CCCCccccccCceeEeecCceEEEecccCCeeeeCcee
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMP-----MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIK 393 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~ 393 (499)
.|+ .||+++ ++..+.+ +..++..+...+...+ ...+.+||+|||+|+++++|++++.||.+|+|+.+|.+
T Consensus 351 ~~~--~Gel~v~g~~~~~g--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 426 (515)
T TIGR03098 351 PGE--EGELVHRGALVAMG--YWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYR 426 (515)
T ss_pred CCC--ceEEEEcCchhhcc--ccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEE
Confidence 988 599999 5443332 1222222222332211 12345689999999999999999999999999999999
Q ss_pred echHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCC
Q 010854 394 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFP 473 (499)
Q Consensus 394 v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP 473 (499)
|+|.+||+++. .+|.|.+++|++.+++..+ +.++++++...+...+.+++.++ +.++|++++.|..++++++||
T Consensus 427 v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~~----l~~~l~~~~~p~~i~~v~~iP 500 (515)
T TIGR03098 427 VSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG-QAIVLVVTPPGGEELDRAALLAE----CRARLPNYMVPALIHVRQALP 500 (515)
T ss_pred eCHHHHHHHHh-cCCCeeEEEEEeccCcccC-ceEEEEEEeCCCCCCCHHHHHHH----HHhhCccccCCCEEEEeccCC
Confidence 99999999997 8999999999999988877 88888888766555555555554 556899999999999999999
Q ss_pred CCCCcHHHHHHHHH
Q 010854 474 RTASNKLLRRVLRD 487 (499)
Q Consensus 474 ~t~~GKv~r~~l~~ 487 (499)
+|.+||++|++|++
T Consensus 501 ~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 501 RNANGKIDRKALAA 514 (515)
T ss_pred CCCCCCCcHHHhcc
Confidence 99999999999864
No 37
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.4e-58 Score=462.10 Aligned_cols=407 Identities=16% Similarity=0.141 Sum_probs=326.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCc
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK 82 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (499)
++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++..... ..
T Consensus 43 ~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~---------- 106 (452)
T PRK07445 43 RTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLDQLKL------SH---------- 106 (452)
T ss_pred CCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecCcccc------cc----------
Confidence 57999999999999999999999999999999999999999999999999999998764210 00
Q ss_pred eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce
Q 010854 83 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA 162 (499)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~ 162 (499)
. .. .. . ......++++++++|||||||.||+|++||+++...+.....
T Consensus 107 ---~-------------~~----------~~--~----~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~ 154 (452)
T PRK07445 107 ---P-------------PP----------LP--S----QGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQR 154 (452)
T ss_pred ---C-------------CC----------CC--c----cccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHH
Confidence 0 00 00 0 001134689999999999999999999999999887776666
Q ss_pred eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcccc
Q 010854 163 HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDW 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l 242 (499)
.+++.+ ++.++++|++|.+|+..++.+++.|+++++.+.. ..........++++|++.++|++++.+++.. ..++
T Consensus 155 ~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l 229 (452)
T PRK07445 155 YFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWL 229 (452)
T ss_pred HhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhh
Confidence 566655 3567889999999998888999999999988632 1222233445788999999999999988632 3347
Q ss_pred cceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCCCCCCCCC
Q 010854 243 TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDD 321 (499)
Q Consensus 243 ~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~g~~~~~g 321 (499)
+++|.+++||+++++++.+.+.. . +.++++.||+||++..+....... .....++|+|.|+++++|+ .+
T Consensus 230 ~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~--------~g 299 (452)
T PRK07445 230 AQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP--------AN 299 (452)
T ss_pred hcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc--------CC
Confidence 89999999999999998887754 3 788999999999875443322211 2235689999999999998 23
Q ss_pred CCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHH
Q 010854 322 QPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 400 (499)
Q Consensus 322 ~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE 400 (499)
+ .||++| ++..+.+ |+. . ....++||+|||++++|+||++++.||.||+||++|++|+|.+||
T Consensus 300 ~--~Gel~v~g~~~~~g------------Y~~-~-~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE 363 (452)
T PRK07445 300 Q--TGNITIQAQSLALG------------YYP-Q-ILDSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVE 363 (452)
T ss_pred C--cceEEEeCCccchh------------hcC-C-ccCCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHH
Confidence 4 499999 5544433 232 1 123467999999999999999999999999999999999999999
Q ss_pred HHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHH
Q 010854 401 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 480 (499)
Q Consensus 401 ~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv 480 (499)
++|. .||+|.+++|++.+++..| +.++++++..++ ..+.+++.+ +++++|+.|+.|..++++++||+|++||+
T Consensus 364 ~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~~-~~~~~~l~~----~~~~~L~~~~~P~~i~~v~~lP~t~~GKi 436 (452)
T PRK07445 364 AAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKDP-SISLEELKT----AIKDQLSPFKQPKHWIPVPQLPRNPQGKI 436 (452)
T ss_pred HHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCCC-CCCHHHHHH----HHHHhCCcccCCeEEEEecCCCCCCCccc
Confidence 9996 8999999999999998888 889999988755 234444444 46678999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 010854 481 LRRVLRDQIKHELSV 495 (499)
Q Consensus 481 ~r~~l~~~~~~~~~~ 495 (499)
+|++|++++.++++.
T Consensus 437 ~r~~L~~~~~~~~~~ 451 (452)
T PRK07445 437 NRQQLQQIAVQRLGL 451 (452)
T ss_pred CHHHHHHHHHHhhCC
Confidence 999999999998864
No 38
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=6.2e-58 Score=470.34 Aligned_cols=457 Identities=19% Similarity=0.207 Sum_probs=357.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+|+++.+. ...............+.
T Consensus 75 ~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~-~~~~~~~~~~~~~~~~~ 153 (538)
T TIGR03208 75 VGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFR-GFDHAAMARELQSKLPA 153 (538)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccc-cccHHHHHHHHhccCCc
Confidence 67899999999999999999999999999999999999999999999999999999987531 00111111111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
...++..... ....+.+++.......... ........++++++++|||||||.||+|+++|+++...+.
T Consensus 154 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~ 225 (538)
T TIGR03208 154 LRQVVVIDGD--------GDDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIH 225 (538)
T ss_pred ceEEEEecCC--------CCcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHH
Confidence 1111111110 1123444333211100000 0112235679999999999999999999999999998888
Q ss_pred hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL 237 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 237 (499)
.....++++.+|++++.+|++|..++.. ++.+++.|+++++.+ .+++..+++.++++++|++.++|+++..+......
T Consensus 226 ~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~ 304 (538)
T TIGR03208 226 PYAERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKE 304 (538)
T ss_pred HHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc
Confidence 8777788899999999999999988765 889999999998875 56789999999999999999999999998876554
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCCCC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
.+.+++++|.++++|+++++.+.+++.+.+ ++.+++.||+||++.......... .....++|+|+++++++|+|++++
T Consensus 305 ~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~ 383 (538)
T TIGR03208 305 SGAPVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGA 383 (538)
T ss_pred cCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCC
Confidence 456678999999999999999998887766 688999999999886554333221 122457899999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeec
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 395 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~ 395 (499)
+++.|+ .|||++ ++..+.+ ++.+++.+. ..+++||+|||+|++|++|++++.||.+|+++++|++|+
T Consensus 384 ~~~~g~--~Gel~v~g~~~~~g--y~~~~~~~~--------~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 451 (538)
T TIGR03208 384 KLSQGE--TGRLLVRGCSNFGG--YLKRPHLNS--------TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIP 451 (538)
T ss_pred CCcCCC--CcEEEEecCccccc--ccCCccccc--------ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEEC
Confidence 999998 499999 5443332 222222211 135689999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t 475 (499)
|.+||+++. .+++|.+++|++.++...+ +.+++++++..+...+.+++.+++++ .+++.|+.|..+++++++|+|
T Consensus 452 p~eIE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~v~~~~~~~~~~~~l~~~~~~---~~l~~~~~P~~i~~v~~iP~t 526 (538)
T TIGR03208 452 VVEIENLLY-QHPAVAQVAIVAYPDERLG-ERACAVVVPKPGCTLDFAAMVAFLKA---QKVALQYIPERLEVVDALPAT 526 (538)
T ss_pred HHHHHHHHh-cCcceeeEEEEeccCCCCC-ceEEEEEEECCCCCCCHHHHHHHHHh---cchhhccCCcEEEEeccCCCC
Confidence 999999996 8999999999999988777 88999999887655566666555432 368899999999999999999
Q ss_pred CCcHHHHHHHH
Q 010854 476 ASNKLLRRVLR 486 (499)
Q Consensus 476 ~~GKv~r~~l~ 486 (499)
++||++|++|+
T Consensus 527 ~~gKv~r~~L~ 537 (538)
T TIGR03208 527 PAGKIQKFRLR 537 (538)
T ss_pred CccccchHhhc
Confidence 99999999986
No 39
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-58 Score=467.04 Aligned_cols=442 Identities=19% Similarity=0.198 Sum_probs=357.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+++++..++++++++.+++++.... .+.........
T Consensus 50 ~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~~ 123 (496)
T PRK06839 50 VKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQN------MALSMQKVSYV 123 (496)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHH------HHHHhhhccCc
Confidence 579999999999999999999999999999999999999999999999999999999875421 11111111110
Q ss_pred -ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 -KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
..+.+ .++.++...... ......++++++++|||||||.||+|.++|.++.......
T Consensus 124 ~~~~~~---------------~~~~~~~~~~~~-------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 181 (496)
T PRK06839 124 QRVISI---------------TSLKEIEDRKID-------NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNN 181 (496)
T ss_pred ceEEEe---------------cchHhhhccCCC-------CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHH
Confidence 11111 122222221111 1112446899999999999999999999999987766655
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
...++++.+|++++.+|++|.+++.. ++.++..|+++++.+ ..+++.+++.++++++|++.++|++++.+++......
T Consensus 182 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 260 (496)
T PRK06839 182 TFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFET 260 (496)
T ss_pred HHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCccccc
Confidence 56678889999999999999999876 688899999988765 5688999999999999999999999999998876666
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC-CCCCccccccccCCCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
.+++++|.++++|+.+++++...+... +.++.+.||+||++...+.... ......+++|+|+++++++|+|+++.++
T Consensus 261 ~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~ 338 (496)
T PRK06839 261 TNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKV 338 (496)
T ss_pred CCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCC
Confidence 778899999999999999998888764 7889999999999865443322 2234567899999999999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
+.|+ .|||+| ++..+. .+..+++.+...+ .++||+|||+++++++|++++.||.+|+|+++|.+|+|.
T Consensus 339 ~~g~--~Gel~v~~~~~~~--gy~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 407 (496)
T PRK06839 339 EVGE--VGELLIRGPNVMK--EYWNRPDATEETI-------QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPL 407 (496)
T ss_pred CCCC--ceEEEEECCCcch--hhcCChHHHHHHH-------cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHH
Confidence 9998 599999 444332 1222222222222 257999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
+||+++. .+|+|.+++|++++++..+ +.++++|+++++...+.++++++ +.+.|+.|++|..+++++++|+|.+
T Consensus 408 ~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~P~~~~~v~~~P~t~~ 481 (496)
T PRK06839 408 EVEQVIN-KLSDVYEVAVVGRQHVKWG-EIPIAFIVKKSSSVLIEKDVIEH----CRLFLAKYKIPKEIVFLKELPKNAT 481 (496)
T ss_pred HHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEEEECCCCCCCHHHHHHH----HHhhCcCCCCCcEEEEeccCCCCcc
Confidence 9999996 8999999999999998888 89999999987666666555554 5568999999999999999999999
Q ss_pred cHHHHHHHHHHHHh
Q 010854 478 NKLLRRVLRDQIKH 491 (499)
Q Consensus 478 GKv~r~~l~~~~~~ 491 (499)
||++|++|+++.++
T Consensus 482 GKi~r~~l~~~~~~ 495 (496)
T PRK06839 482 GKIQKAQLVNQLKS 495 (496)
T ss_pred ccccHHHHHHHhhc
Confidence 99999999987654
No 40
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-58 Score=468.73 Aligned_cols=456 Identities=24% Similarity=0.274 Sum_probs=366.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++..++++++++++++++.... .........+.
T Consensus 52 v~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 125 (513)
T PRK07656 52 IGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLG------VDYSATTRLPA 125 (513)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHH------HHHHHHhccCC
Confidence 688999999999999999999999999999999999999999999999999999999875421 11111111111
Q ss_pred c-eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
. .++........ .......+|.++...... .........+++++++|||||||.||+|.++|.++...+...
T Consensus 126 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~ 198 (513)
T PRK07656 126 LEHVVICETEEDD--PHTEKMKTFTDFLAAGDP-----AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADW 198 (513)
T ss_pred ccEEEEEcCcccc--cCccccccHHHHHhcCCC-----CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHH
Confidence 1 12111111111 011133567776543221 112334567999999999999999999999999999888887
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
...+++++++++++.+|++|.+++.. ++.+++.|+++++.+ ..+++.+++.|+++++|++.++|+++..|.+......
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 277 (513)
T PRK07656 199 AEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSA 277 (513)
T ss_pred HHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCC
Confidence 77888999999999999999999876 889999999998875 5678999999999999999999999999999877777
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCc--cccccccCCCceEEEECCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA--FGAFSTATMTAGLVILDECGVP 317 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~i~d~~g~~ 317 (499)
.+++++|.++++|+++++.+.+.+...+....+++.||+||++++...+....... ..++|.|+++++++|+|+.+++
T Consensus 278 ~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~ 357 (513)
T PRK07656 278 EDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEE 357 (513)
T ss_pred CCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCC
Confidence 77899999999999999999999987774338999999999987666555433322 6789999999999999999999
Q ss_pred CCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeech
Q 010854 318 YPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 396 (499)
Q Consensus 318 ~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~ 396 (499)
++.|+. ||+++ ++....+ ++.++..+. +..++++||+|||+|+++++|++++.||.+|+++++|.+++|
T Consensus 358 ~~~g~~--Gel~v~~~~~~~g--y~~~~~~~~------~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~ 427 (513)
T PRK07656 358 VPVGEV--GELLVRGPNVMKG--YYDDPEATA------AAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYP 427 (513)
T ss_pred CCCCCc--eEEEEEcchhhhh--hcCCHHHHh------hhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCH
Confidence 999984 99999 4433322 111111111 122446799999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCC
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
.+||++|. .+++|.+++|++.++...+ +.++++|+..++...+.+++.++ +.+.|++++.|..++++++||+|+
T Consensus 428 ~~iE~~l~-~~~~i~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~p~~i~~v~~iP~t~ 501 (513)
T PRK07656 428 AEVEEVLY-EHPAVAEAAVIGVPDERLG-EVGKAYVVLKPGAELTEEELIAY----CREHLAKYKVPRSIEFLDELPKNA 501 (513)
T ss_pred HHHHHHHH-hCCCeeEEEEEecCCcccC-ceEEEEEEECCCCCCCHHHHHHH----HHhhcccccCCCEEEEecCCCCCC
Confidence 99999996 8999999999999988777 88899999876555565555554 557899999999999999999999
Q ss_pred CcHHHHHHHHH
Q 010854 477 SNKLLRRVLRD 487 (499)
Q Consensus 477 ~GKv~r~~l~~ 487 (499)
+||++|++|++
T Consensus 502 ~gK~~r~~l~~ 512 (513)
T PRK07656 502 TGKVLKRALRE 512 (513)
T ss_pred ccceeHHHHhc
Confidence 99999999874
No 41
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.3e-58 Score=473.43 Aligned_cols=467 Identities=21% Similarity=0.241 Sum_probs=362.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++.+|+++.... ...........
T Consensus 79 i~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 152 (573)
T PRK05605 79 VRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAP------TVERLRRTTPL 152 (573)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHH------HHHhhhhcccc
Confidence 689999999999999999999999999999999999999999999999999999999775321 11111111111
Q ss_pred ceEEecccCCC---------------------CCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCC
Q 010854 82 KAIVLPAIGND---------------------VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 140 (499)
Q Consensus 82 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtT 140 (499)
..++....... .......+..+|.++......... ..........+++++++||||||
T Consensus 153 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTT 231 (573)
T PRK05605 153 ETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDG-SDVSHPRPTPDDVALILYTSGTT 231 (573)
T ss_pred ceeEeeecccccccccccccccccccccccccccccCCCcceeHHHHhhccccccc-cccCCCCCCCCCEEEEEcCCCCC
Confidence 11111100000 000011233456665543221000 11122235678999999999999
Q ss_pred CCCceEEecchhhHHHhhhcceecc-C-cCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhC
Q 010854 141 GEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAG 217 (499)
Q Consensus 141 G~pk~v~~s~~~~~~~~~~~~~~~~-~-~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~ 217 (499)
|.||+|.++|+++...+......+. + ..+++++..+|++|.+++.. ++.+++.|+++++.+ ..+++.+++.+++++
T Consensus 232 G~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~ 310 (573)
T PRK05605 232 GKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHP 310 (573)
T ss_pred CCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhC
Confidence 9999999999998877654333222 2 34789999999999999865 777889999999886 457899999999999
Q ss_pred CeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccc
Q 010854 218 VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFG 297 (499)
Q Consensus 218 ~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~ 297 (499)
+|++.++|++++.|.+.......+++++|.++++|+.+++++.+.+...+ +..+++.||+||++..+...........+
T Consensus 311 ~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~ 389 (573)
T PRK05605 311 PTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSDDRRPG 389 (573)
T ss_pred CEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcccCCcCC
Confidence 99999999999999988777777789999999999999999988887655 68899999999998766655444444567
Q ss_pred cccccCCCceEEEECCC--CCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecC
Q 010854 298 AFSTATMTAGLVILDEC--GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 298 ~~g~~~~~~~~~i~d~~--g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 374 (499)
++|+|.+++.++|+|++ +.+++.|+ .|||++ ++..+.+ ++.++..+...|. .+||+|||+++++++
T Consensus 390 ~~G~~~~~~~~~i~d~~~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~~-------~g~~~TGD~~~~~~~ 458 (573)
T PRK05605 390 YVGVPFPDTEVRIVDPEDPDETMPDGE--EGELLVRGPQVFKG--YWNRPEETAKSFL-------DGWFRTGDVVVMEED 458 (573)
T ss_pred ccccCCCCCEEEEEcCCCCCccCCCCC--eeEEEEecCchhhh--hcCChhHhhhccc-------CCCcccCCEEEEcCC
Confidence 89999999999999954 58888888 599999 4433332 2222222222221 249999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ 454 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 454 (499)
|++++.||.||+++++|++|+|.+||+++. .++.|.++++++.++...+ +.+++++++.++...+.+++.++ ++
T Consensus 459 g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~-~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~l~~~----~~ 532 (573)
T PRK05605 459 GFIRIVDRIKELIITGGFNVYPAEVEEVLR-EHPGVEDAAVVGLPREDGS-EEVVAAVVLEPGAALDPEGLRAY----CR 532 (573)
T ss_pred CcEEEEeccccceeeCCEEECHHHHHHHHH-hCcccceEEEEeeecccCC-eEEEEEEEECCCCCCCHHHHHHH----HH
Confidence 999999999999999999999999999997 8999999999999988777 89999999887655565555444 56
Q ss_pred hhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhh
Q 010854 455 SKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 455 ~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
+.|+.++.|..++++++||+|.+||++|++|++++.++++
T Consensus 533 ~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~~ 572 (573)
T PRK05605 533 EHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLEKLG 572 (573)
T ss_pred HhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHHHhc
Confidence 7888999999999999999999999999999999988765
No 42
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-57 Score=471.35 Aligned_cols=472 Identities=18% Similarity=0.212 Sum_probs=369.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc---
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--- 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--- 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..++++++++.+|+++..... .....+......
T Consensus 67 i~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~ 145 (558)
T PRK12583 67 VQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAE 145 (558)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhcc
Confidence 6899999999999999999999999999999999999999999999999999999997643110 000111111000
Q ss_pred ----------CCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCC-CCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010854 79 ----------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIP 147 (499)
Q Consensus 79 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~ 147 (499)
.+....++..... .......|.++........ ...........++++++++|||||||.||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~ 220 (558)
T PRK12583 146 GQPGALACERLPELRGVVSLAPA-----PPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGAT 220 (558)
T ss_pred ccccccccccCCcceEEEEecCC-----CCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEE
Confidence 0001111111111 1123344555443322100 00011122345789999999999999999999
Q ss_pred ecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH
Q 010854 148 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
++|+++...+......++++++|++++..|++|.++... ++.++..|+++++.....++..+++.++++++|++.++|+
T Consensus 221 ~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 221 LSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred eeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHH
Confidence 999999888887777788999999999999999999876 8888999999987765667889999999999999999999
Q ss_pred HHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC--CCccccccccCC
Q 010854 227 LVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATM 304 (499)
Q Consensus 227 ~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~--~~~~~~~g~~~~ 304 (499)
++..++........+++++|.++++|+.+++++.+++.+.+....+++.||+||++.+........ .....++|.|.+
T Consensus 301 ~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~ 380 (558)
T PRK12583 301 MFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQP 380 (558)
T ss_pred HHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCC
Confidence 999888776656677899999999999999999999988886678999999999997665443221 234578999999
Q ss_pred CceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEeccc
Q 010854 305 TAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA 383 (499)
Q Consensus 305 ~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~ 383 (499)
++.++|+|+++.+++.|+ .|||++ ++..+.+ ++.++......+ ..++||+|||+++++++|++++.||.
T Consensus 381 ~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~~------~~~~~~~TGDl~~~~~dg~l~i~GR~ 450 (558)
T PRK12583 381 HLEVKVVDPDGATVPRGE--IGELCTRGYSVMKG--YWNNPEATAESI------DEDGWMHTGDLATMDEQGYVRIVGRS 450 (558)
T ss_pred CCeEEEECCCCCCCCCCC--eeEEEEEeCccchh--hcCChHHHHhhc------CCCCCeeccceEEECCCccEEEEecc
Confidence 999999998899999998 599999 4433332 222222222112 24579999999999999999999999
Q ss_pred CCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceee
Q 010854 384 DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV 463 (499)
Q Consensus 384 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 463 (499)
+|+++++|.+|+|.+||+++. .+++|.+++|++.++...+ +.++++++..++.+.+.+++.++ ++++|+.|+.|
T Consensus 451 ~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~i~~~----~~~~L~~~~~P 524 (558)
T PRK12583 451 KDMIIRGGENIYPREIEEFLF-THPAVADVQVFGVPDEKYG-EEIVAWVRLHPGHAASEEELREF----CKARIAHFKVP 524 (558)
T ss_pred cceeEECCEEeCHHHHHHHHH-hCCCeeEEEEEeeecCCCC-cEEEEEEEECCCCCCCHHHHHHH----HHhhcccCcCC
Confidence 999999999999999999997 8999999999999987777 88999999876655555554444 56789999999
Q ss_pred eEEEEcCCCCCCCCcHHHHHHHHHHHHhhhhh
Q 010854 464 SLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 464 ~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
.+++++++||+|++||++|+.|+++..+++..
T Consensus 525 ~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~~~ 556 (558)
T PRK12583 525 RYFRFVDEFPMTVTGKVQKFRMREISIEELAL 556 (558)
T ss_pred cEEEEeccCCCCCCCCccHHHHHHHHHhhcCC
Confidence 99999999999999999999999998876654
No 43
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-58 Score=468.74 Aligned_cols=462 Identities=20% Similarity=0.188 Sum_probs=371.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++.+++++... ..+....+....
T Consensus 58 i~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 131 (523)
T PRK08316 58 LKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA------PTAEAALALLPV 131 (523)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchH------HHHHHHhhhcCc
Confidence 67999999999999999999999999999999999999999999999999999999987542 122222211111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.......... ..........+.++...... .........+++++++|||||||.||+|.++|.++........
T Consensus 132 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~ 204 (523)
T PRK08316 132 DTLILSLVLG--GREAPGGWLDFADWAEAGSV-----AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCI 204 (523)
T ss_pred cceeeeeccc--ccccccchhhHHHHHhcCCC-----ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 1111111000 11112233455555443221 1123345678999999999999999999999999998887777
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++++++++..+|++|.+++.. ++.++..|+++++.+ ..+++.+++.++++++|++.++|+++..+.+.......
T Consensus 205 ~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 283 (523)
T PRK08316 205 VAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTR 283 (523)
T ss_pred HHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccC
Confidence 7788999999999999999999865 667788999999986 45789999999999999999999999999988776677
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC-CCCccccccccCCCceEEEECCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
+++++|.+++||+.++.++...+++.+++..+++.||+||++.+....... .....+++|+|+++++++|+|++|++++
T Consensus 284 ~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~ 363 (523)
T PRK08316 284 DLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVA 363 (523)
T ss_pred CcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCC
Confidence 789999999999999999999999888788999999999998765544332 2344578999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ .||+++ ++....+ ++.+++.+...+ .++||+|||+|+++++|++++.||.+|+++++|.+|+|.+
T Consensus 364 ~g~--~Gei~v~~~~~~~~--y~~~~~~~~~~~-------~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~ 432 (523)
T PRK08316 364 PGE--VGEIVHRSPQLMLG--YWDDPEKTAEAF-------RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASRE 432 (523)
T ss_pred CCC--cceEEEECCchhhh--hcCCHHHHHHHh-------hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHH
Confidence 998 599999 4443332 222222222222 2579999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||+.+. .+++|.+++|++.+++..+ +.+++++++.++...+.+++.++ ++++|+.|+.|..+++++++|+|++|
T Consensus 433 iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~p~~i~~v~~~p~t~~g 506 (523)
T PRK08316 433 VEEALY-THPAVAEVAVIGLPDPKWI-EAVTAVVVPKAGATVTEDELIAH----CRARLAGFKVPKRVIFVDELPRNPSG 506 (523)
T ss_pred HHHHHH-hCCChheEeEecccCcccC-CeEEEEEEECCCCCCCHHHHHHH----HHHhcccCCCCcEEEEecCCCCCCcc
Confidence 999996 8999999999999988777 88999999887655455554444 56688999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 010854 479 KLLRRVLRDQIKHELS 494 (499)
Q Consensus 479 Kv~r~~l~~~~~~~~~ 494 (499)
|++|++|++.|++.+.
T Consensus 507 Ki~r~~l~~~~~~~~~ 522 (523)
T PRK08316 507 KILKRELRERYAGAFT 522 (523)
T ss_pred ceeHHHHHHHHHhhcc
Confidence 9999999999987653
No 44
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.7e-58 Score=478.02 Aligned_cols=453 Identities=19% Similarity=0.177 Sum_probs=341.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEc-CCCCC--HHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|+++.... ........
T Consensus 76 ~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~------~~~~~~~~ 149 (631)
T PRK07769 76 TKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE------GVRKFFRA 149 (631)
T ss_pred cCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHH------HHHHHHhh
Confidence 5899999999999999999999999999999999 45543 688999999999999999875321 11111111
Q ss_pred CC--CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 79 AP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 79 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
.+ ....++...... + ... .........++++++++|||||||.||||+++|+++...
T Consensus 150 ~~~~~~~~~~~~~~~~-------------~---~~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~ 208 (631)
T PRK07769 150 RPAKERPRVIAVDAVP-------------D---EVG-----ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTN 208 (631)
T ss_pred ccccccceEEEccccc-------------c---ccc-----cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHH
Confidence 11 001111110000 0 000 001111345789999999999999999999999999888
Q ss_pred hhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CC--ChhHHHHHHHHhCC---eEEecchHHHHH
Q 010854 157 TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKA 230 (499)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~--~~~~~~~~i~~~~~---t~l~~~P~~l~~ 230 (499)
+......+++.++|+++.++|++|.+++...+.+++.|+++++.++ .+ ++..+++.++++++ +.+.++|+++..
T Consensus 209 ~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~ 288 (631)
T PRK07769 209 VLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFE 288 (631)
T ss_pred HHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHH
Confidence 7777777788999999999999999999887777888999988854 23 67888999999886 789999998877
Q ss_pred HHccC---C--CCcccccceeEEEeecCCCChhhHHHHHhhcc-----cCceeccccccceeeeeecCCCCCC-------
Q 010854 231 WRNTN---C--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------- 293 (499)
Q Consensus 231 l~~~~---~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yg~tE~~~~~~~~~~~~~------- 293 (499)
+.... . ....+++++|.+++||+++++++.+++.+.+. ...+++.||+||++..+........
T Consensus 289 l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~ 368 (631)
T PRK07769 289 HAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVD 368 (631)
T ss_pred HHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEc
Confidence 66431 1 12457889999999999999999998887762 2459999999998765543321110
Q ss_pred -------------------CccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhc
Q 010854 294 -------------------QAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFR 352 (499)
Q Consensus 294 -------------------~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~ 352 (499)
....++|+|.++..++|+| ++|++++.|+ +|||++ ++..+.+ ++.+++.+...|.
T Consensus 369 ~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge--~GEl~v~gp~v~~G--Y~~~~~~t~~~f~ 444 (631)
T PRK07769 369 RDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQ--IGEIWLHGNNIGTG--YWGKPEETAATFQ 444 (631)
T ss_pred HHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCC--EEEEEecCCCcccc--ccCChhHHHHHHh
Confidence 0125789999999999999 6899999998 599999 6655543 3344444444443
Q ss_pred CCC-----------CCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCcccee--eeEEEeC
Q 010854 353 GMP-----------MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVS 419 (499)
Q Consensus 353 ~~~-----------~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~--~~v~~~~ 419 (499)
..+ ...+++||+|||+|+++ +|+|+++||.||+||++|++|+|.|||++|.+.||.|.+ ++|++++
T Consensus 445 ~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~ 523 (631)
T PRK07769 445 NILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVP 523 (631)
T ss_pred hhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEec
Confidence 210 11345899999999995 999999999999999999999999999999634899998 8999888
Q ss_pred C-------------------CCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhhcCC-ce-eeeEEEEcC--CCCCC
Q 010854 420 P-------------------AGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQSKLNP-LF-KVSLVKVVP--EFPRT 475 (499)
Q Consensus 420 ~-------------------~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~~~~~~~l~~-~~-~p~~~~~~~--~iP~t 475 (499)
+ +..+ +.++++|++.++. ..+.++|.+++++ .|+. |. .|+.+++++ +||+|
T Consensus 524 d~~~~~~~~~~~~~~~~~~~~~~g-e~~~a~v~~~~~~~~~~~~~l~~~~~~----~l~~~~~~~p~~~~~v~~~~lP~t 598 (631)
T PRK07769 524 ANQLPQVVFDDSHAGLKFDPEDTS-EQLVIVAERAPGAHKLDPQPIADDIRA----AIAVRHGVTVRDVLLVPAGSIPRT 598 (631)
T ss_pred ccccccccccccccccccccCCCC-ccEEEEEEecCccccccHHHHHHHHHH----HHHHHcCCCccEEEEECCCccccC
Confidence 8 4466 8899999988763 3456666666655 4443 34 367788886 79999
Q ss_pred CCcHHHHHHHHHHHHh
Q 010854 476 ASNKLLRRVLRDQIKH 491 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~ 491 (499)
++|||+|++|++.+.+
T Consensus 599 ~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 599 SSGKIARRACRAAYLD 614 (631)
T ss_pred CCcHHHHHHHHHHHHc
Confidence 9999999999998753
No 45
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.3e-57 Score=468.54 Aligned_cols=456 Identities=18% Similarity=0.195 Sum_probs=357.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+|+++...... . ....
T Consensus 77 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~------~----~~~~ 146 (546)
T PLN02330 77 LRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKV------K----GLGL 146 (546)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhH------h----hcCC
Confidence 67999999999999999999999999999999999999999999999999999999988543211 1 1111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+++.. .. ......|.+++..... ............+++++++|||||||.||+|+++|.++...+....
T Consensus 147 ~~i~~~~--~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~ 217 (546)
T PLN02330 147 PVIVLGE--EK-----IEGAVNWKELLEAADR--AGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSL 217 (546)
T ss_pred cEEEecC--CC-----CCCcccHHHHHhhccc--cCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHh
Confidence 1222211 11 1234567776654322 1111112234568999999999999999999999999887654332
Q ss_pred eec--cCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 162 AHI--DLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 162 ~~~--~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
... .....+..+.++|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++.++|+++..+++.....
T Consensus 218 ~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 296 (546)
T PLN02330 218 FSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVE 296 (546)
T ss_pred hccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcccc
Confidence 211 1223467889999999999875 788899999999886 567889999999999999999999999998865544
Q ss_pred ccccc--ceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----CCccccccccCCCceEEEEC
Q 010854 239 GLDWT--KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILD 312 (499)
Q Consensus 239 ~~~l~--~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~i~d 312 (499)
..++. .+|.++++|+++++++.+++.+.+++..+++.||+||++.......... .....++|.|+|+++++++|
T Consensus 297 ~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d 376 (546)
T PLN02330 297 EFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFID 376 (546)
T ss_pred ccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEe
Confidence 44444 4789999999999999999998887899999999999876544322111 12346899999999999999
Q ss_pred -CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeC
Q 010854 313 -ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 390 (499)
Q Consensus 313 -~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~ 390 (499)
+++++++.|+ .|||++ ++..+.+ ++.++..+... .+.++||+|||+++++++|++++.||.+|+++++
T Consensus 377 ~~~~~~~p~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~------~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 446 (546)
T PLN02330 377 PDTGRSLPKNT--PGELCVRSQCVMQG--YYNNKEETDRT------IDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYK 446 (546)
T ss_pred CCCCccCCCCC--ceEEEEecchhhhh--hccCccchhhh------ccCCCceecccEEEEeCCCcEEEEechHHhhhcC
Confidence 7889999998 599999 5443332 11122222211 2356899999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
|++|+|.+||+++. .+++|.+++|++++++..+ +.++++|++.++...+.+++.+ +++..|+.|+.|..+++++
T Consensus 447 G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~v~~~~~~~~~~~~l~~----~~~~~l~~~~~p~~~~~v~ 520 (546)
T PLN02330 447 GFQVAPAELEAILL-THPSVEDAAVVPLPDEEAG-EIPAACVVINPKAKESEEDILN----FVAANVAHYKKVRVVQFVD 520 (546)
T ss_pred CEEECHHHHHHHHH-hCCchheEEEEeccccccC-ceeEEEEEECCCCCCCHHHHHH----HHHHhcccccCceEEEEec
Confidence 99999999999996 8999999999999988887 8889999988765555554444 4566899999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhh
Q 010854 471 EFPRTASNKLLRRVLRDQIKHEL 493 (499)
Q Consensus 471 ~iP~t~~GKv~r~~l~~~~~~~~ 493 (499)
++|+|++||++|++|++++....
T Consensus 521 ~iP~t~~GK~~r~~L~~~~~~~~ 543 (546)
T PLN02330 521 SIPKSLSGKIMRRLLKEKMLSIN 543 (546)
T ss_pred cCCCCCCcceeHHHHHHHHHhhh
Confidence 99999999999999999997653
No 46
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=467.11 Aligned_cols=457 Identities=20% Similarity=0.221 Sum_probs=349.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++.+|++........ ........
T Consensus 65 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~~~~~~~~ 138 (534)
T PRK05852 65 LLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA------EPTTRWWP 138 (534)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc------cccccccc
Confidence 689999999999999999999999999999999999999999999999999999998764211000 00000001
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+...... ..+.... ....... +. ..........+++++++|||||||.||+|+++|+++...+....
T Consensus 139 ~~~~~~~~~~~-----~~~~~~~-~~~~~~~--~~-~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~ 209 (534)
T PRK05852 139 LTVNVGGDSGP-----SGGTLSV-HLDAATE--PT-PATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAII 209 (534)
T ss_pred eeeeecccccc-----ccccccc-ccccccC--CC-ccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHH
Confidence 11111100000 0000000 0000000 00 00111112247889999999999999999999999998888887
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecC-CCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC-
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE- 238 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~- 238 (499)
..++++.+|++++.+|++|.+++.. ++.+++.|+++++.+ ..+++..+++.|+++++|.++++|+++..|.+.....
T Consensus 210 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 289 (534)
T PRK05852 210 TGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP 289 (534)
T ss_pred HHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc
Confidence 7888999999999999999999876 888888999888754 2456788999999999999999999999998865432
Q ss_pred -cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC----CCCcccccccc--CCCceEEEE
Q 010854 239 -GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTA--TMTAGLVIL 311 (499)
Q Consensus 239 -~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~----~~~~~~~~g~~--~~~~~~~i~ 311 (499)
..+++++|.+.++|+++++.+.+++.+.+ +..+++.||+||++......... ......+.|.+ .++++++++
T Consensus 290 ~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~ 368 (534)
T PRK05852 290 SGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIV 368 (534)
T ss_pred ccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEE
Confidence 34567999999999999999999988776 68899999999998655433221 11111233443 699999999
Q ss_pred CCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeC
Q 010854 312 DECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 390 (499)
Q Consensus 312 d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~ 390 (499)
|++|++++.|+ .|||++ ++..+.+ ++.+++.+...+ .++||+|||++++|++|++++.||.+|+|+++
T Consensus 369 d~~g~~~~~g~--~Gel~v~g~~v~~g--Y~~~~~~t~~~~-------~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~ 437 (534)
T PRK05852 369 GSDGLPLPAGA--VGEVWLRGTTVVRG--YLGDPTITAANF-------TDGWLRTGDLGSLSAAGDLSIRGRIKELINRG 437 (534)
T ss_pred CCCCCCCCCCC--ceEEEEecCcccch--hcCCcccchhhh-------cCCCcccCceEEEeCCCcEEEEecchhhEEEC
Confidence 99999999998 599999 5544432 222333332222 24699999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
|.+|+|.+||+++. .+|+|.+++|++.+++..+ +.++++|+..+....+.+++.++ ++++|+.|++|..+++++
T Consensus 438 G~~v~~~~iE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~vv~~~~~~~~~~~i~~~----~~~~l~~~~~P~~i~~v~ 511 (534)
T PRK05852 438 GEKISPERVEGVLA-SHPNVMEAAVFGVPDQLYG-EAVAAVIVPRESAPPTAEELVQF----CRERLAAFEIPASFQEAS 511 (534)
T ss_pred CEEECHHHHHHHHH-hCCCeeeEEEEecCCcCcC-ceEEEEEEECCCCCCCHHHHHHH----HHHhcccccCCeEEEEhh
Confidence 99999999999996 8999999999999988777 88899998766544555555555 556889999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHh
Q 010854 471 EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 471 ~iP~t~~GKv~r~~l~~~~~~ 491 (499)
+||+|++||++|++|++.|..
T Consensus 512 ~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 512 GLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred hcCCCCCccccHHHHHHHhcc
Confidence 999999999999999998864
No 47
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-57 Score=467.15 Aligned_cols=454 Identities=16% Similarity=0.198 Sum_probs=344.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+|+++...... ..+...... .
T Consensus 63 ~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~---~~~~~~~~~--~ 137 (540)
T PRK05857 63 VSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS---SAVPEALHS--I 137 (540)
T ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc---ccccccccc--c
Confidence 68999999999999999999999999999999999999999999999999999999987532110 011110000 0
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.+... .. ... +.+.... ...........+++++++|||||||.||||.++|+++.++.....
T Consensus 138 ~~~~~~~~-~~----~~~----~~~~~~~------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~ 202 (540)
T PRK05857 138 PVIAVDIA-AV----TRE----SEHSLDA------ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQ 202 (540)
T ss_pred ceeEeecc-cc----ccc----ccccccc------cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhh
Confidence 01111100 00 000 0000000 000112234678999999999999999999999999876654322
Q ss_pred ----eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC
Q 010854 162 ----AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL 237 (499)
Q Consensus 162 ----~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 237 (499)
..+....+++.+..+|++|.+++...+.+++.|+++++. ..++..+++.|+++++|+++++|+++..|++....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~--~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~ 280 (540)
T PRK05857 203 KEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVTG--GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKS 280 (540)
T ss_pred hccccccccccCceeeecCCccccchHHHHHHHhhcceeEEec--CCChhHHHHHHHhcCcceEEeChHHHHHHHhcccc
Confidence 223556788999999999999998888899999998764 34678899999999999999999999999887766
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----CCccccccccCCCceEEEECC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDE 313 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~i~d~ 313 (499)
...+++++|.++++|++++....+++ ..+ +.++++.||+||++.......... ....+++|+|++|++++|+|+
T Consensus 281 ~~~~~~~lr~~~~gG~~~~~~~~~~~-~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~ 358 (540)
T PRK05857 281 ANATVPSLRLVGYGGSRAIAADVRFI-EAT-GVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAAT 358 (540)
T ss_pred CCCcCccceEEEEcCccCCchhHHHH-HHh-CCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECc
Confidence 66778999999999999887776544 344 788999999999885433222111 123578999999999999997
Q ss_pred CCCC-C-----CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCe
Q 010854 314 CGVP-Y-----PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDT 386 (499)
Q Consensus 314 ~g~~-~-----~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~ 386 (499)
++.. + +.++ +|||+| ++..+.+ ++.+++.+...| .++||+|||+|++|++|++++.||.+|+
T Consensus 359 ~~~~~~~~~~~~~~~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~-------~~g~~~TGDlg~~d~~g~l~~~GR~~~~ 427 (540)
T PRK05857 359 DGIGPTAPGAGPSAS--FGTLWIKSPANMLG--YWNNPERTAEVL-------IDGWVNTGDLLERREDGFFYIKGRSSEM 427 (540)
T ss_pred cccCccccccCCCCC--cceEEEeCcchhhh--hhCCccchhhhc-------CCCceeccceEEEcCCceEEEecccccc
Confidence 7652 2 3355 599999 5443332 222222222222 2469999999999999999999999999
Q ss_pred eeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhhcCCceeeeE
Q 010854 387 MNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVSL 465 (499)
Q Consensus 387 i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~p~~ 465 (499)
||++|.+|+|.+||++|. .||+|.+++|++.++...+ +.+.++++..+... ...+++.+.+.+.+++.+++|+.|..
T Consensus 428 ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~ 505 (540)
T PRK05857 428 IICGGVNIAPDEVDRIAE-GVSGVREAACYEIPDEEFG-ALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPST 505 (540)
T ss_pred EecCCEEECHHHHHHHHH-hCCCeeEEEEEecCccccc-cceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeE
Confidence 999999999999999997 8999999999999987776 77888887665322 12356777888888889999999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 466 VKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 466 ~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++++++||+|++||++|+.|++.+.+.
T Consensus 506 v~~~~~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 506 IVIVTDIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred EEEhhcCCCCCCcceeHHHHHHhhhhc
Confidence 999999999999999999999888753
No 48
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-57 Score=467.06 Aligned_cols=455 Identities=20% Similarity=0.183 Sum_probs=355.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++.++||+++|++++|+++..+.+++.+++++++++.+++++...+ ...........
T Consensus 54 ~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~ 127 (528)
T PRK07470 54 VRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPE------HAAAVRAASPD 127 (528)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHH------HHHHHHhhCCc
Confidence 679999999999999999999999999999999999999999999999999999999875321 11111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++..... ....++.++...... .........++++++++|||||||.||+|+++|.++...+....
T Consensus 128 ~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 196 (528)
T PRK07470 128 LTHVVAIGGA-------RAGLDYEALVARHLG----ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHL 196 (528)
T ss_pred CceEEEeCCC-------cccccHHHHHhcCCC----CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHH
Confidence 1111111111 123456666543211 11122345678999999999999999999999999876544332
Q ss_pred eec--cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecC-CCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 162 AHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 162 ~~~--~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
..+ +...+|+++..+|++|.+++..++ .++.|+++++.+ ..++++.+++.|+++++|++.++|++++.+.+.....
T Consensus 197 ~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 275 (528)
T PRK07470 197 ADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVD 275 (528)
T ss_pred HHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcC
Confidence 221 467889999999999999987655 566777777664 3457889999999999999999999999998877666
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC-------CCCccccccccCCCceEEEE
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVIL 311 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~i~ 311 (499)
..+++++|.++++|+++++...+++...+ +..+++.||+||++..+...... .....+++|.|++++.++++
T Consensus 276 ~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~ 354 (528)
T PRK07470 276 RYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQ 354 (528)
T ss_pred CCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEE
Confidence 67788999999999999999888887665 67899999999988655433211 12345788999999999999
Q ss_pred CCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeC
Q 010854 312 DECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 390 (499)
Q Consensus 312 d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~ 390 (499)
|++|++++.|+ .|||++ ++..+.+ ++.++..+...+ .++||+|||+++++++|++++.||.||++|++
T Consensus 355 d~~~~~~~~g~--~Gel~i~~~~~~~g--y~~~~~~~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~ 423 (528)
T PRK07470 355 DDEGRELPPGE--TGEICVIGPAVFAG--YYNNPEANAKAF-------RDGWFRTGDLGHLDARGFLYITGRASDMYISG 423 (528)
T ss_pred CCCCCCCCCCC--ceEEEEeCCccchh--hcCCHHHHHhhh-------cCCcEecceeEEEccCCeEEEeCCccceEEeC
Confidence 99999999998 599999 4443332 222222222222 24699999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
|++|+|.+||+++. .+++|.+++|++.+++..+ +.++++++..++...+.+++.++ +.+.|++|+.|..+++++
T Consensus 424 G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----l~~~l~~~~~P~~~~~~~ 497 (528)
T PRK07470 424 GSNVYPREIEEKLL-THPAVSEVAVLGVPDPVWG-EVGVAVCVARDGAPVDEAELLAW----LDGKVARYKLPKRFFFWD 497 (528)
T ss_pred CEEECHHHHHHHHH-hCCCceEEEEEeccCcccC-ceeEEEEEECCCCCCCHHHHHHH----HHHhhhcCCCCcEEEEec
Confidence 99999999999997 8999999999999988777 88888888877655565555554 556888999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhh
Q 010854 471 EFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 471 ~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+||+|++||++|+.|+++++++
T Consensus 498 ~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 498 ALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred cCCCCCcccccHHHHHHHHHhc
Confidence 9999999999999999988764
No 49
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-58 Score=475.65 Aligned_cols=467 Identities=13% Similarity=0.074 Sum_probs=338.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCceEE
Q 010854 6 DAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV 85 (499)
Q Consensus 6 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (499)
|+|+|+++|+++|++++|||+++|++.||+++.++++++.++|+++++++++++.+.. +.+.......+....+
T Consensus 131 d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~i 204 (746)
T PTZ00342 131 KLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKL 204 (746)
T ss_pred cEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999976432 2222222233322222
Q ss_pred ecccCCCCC--CC--------------CC-----------------------------cCCCCHHHHhcccCCC------
Q 010854 86 LPAIGNDVG--IP--------------LR-----------------------------EQDLSWKDFLSSVDYH------ 114 (499)
Q Consensus 86 ~~~~~~~~~--~~--------------~~-----------------------------~~~~~~~~~~~~~~~~------ 114 (499)
+........ .. .. ....++.++.......
T Consensus 205 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 284 (746)
T PTZ00342 205 IILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIIL 284 (746)
T ss_pred EEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEE
Confidence 211110000 00 00 0001112221110000
Q ss_pred ------CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhccee--ccCcCCcEEEeecCccccchhhh
Q 010854 115 ------PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVI 186 (499)
Q Consensus 115 ------~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~~~~~ 186 (499)
............++|+|.|+|||||||.||||++||+++...+...... ....+.+++++++|++|.++...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~ 364 (746)
T PTZ00342 285 FDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI 364 (746)
T ss_pred HHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH
Confidence 0001111233567999999999999999999999999998887654322 12335689999999999999887
Q ss_pred hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHcc--------CCCCc-------------------
Q 010854 187 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------- 239 (499)
Q Consensus 187 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~--------~~~~~------------------- 239 (499)
.+.+++.|+++++.+. ++..+++.|++++||+++++|.+++.+.+. ...+.
T Consensus 365 ~~~~l~~G~~i~~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 442 (746)
T PTZ00342 365 AYLSFMLGGTINIWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFS 442 (746)
T ss_pred HHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcc
Confidence 7788999999998863 678899999999999999999999988652 10000
Q ss_pred ---------------ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccC-
Q 010854 240 ---------------LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT- 303 (499)
Q Consensus 240 ---------------~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~- 303 (499)
.-.+++|.+++||+++++++.++++..+ ++.+++.||+||+++..+.... .....+++|.|+
T Consensus 443 ~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~ 520 (746)
T PTZ00342 443 KFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPIS 520 (746)
T ss_pred hHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccC-CCCCcccccCcCC
Confidence 0026899999999999999999998765 7889999999999765554433 334568999998
Q ss_pred CCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEec
Q 010854 304 MTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQG 381 (499)
Q Consensus 304 ~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~g 381 (499)
|+++++|+| +++.....+. .|||++ ++..+.+ ++.+++.+...| +.++||+|||+|++|++|+|+++|
T Consensus 521 pg~e~ki~d~~~~~~~~~~~--~GEl~vrGp~v~~G--Y~~~pe~T~~~f------~~dGW~~TGDig~~d~dG~l~i~g 590 (746)
T PTZ00342 521 PNTKYKVRTWETYKATDTLP--KGELLIKSDSIFSG--YFLEKEQTKNAF------TEDGYFKTGDIVQINKNGSLTFLD 590 (746)
T ss_pred CcEEEEEecccccccCCCCC--ceEEEEecCccccc--ccCChhhhhhhc------CcCCcccCCcEEEECCCCeEEEEc
Confidence 999999998 4444333333 499999 6665543 344444444444 346899999999999999999999
Q ss_pred ccCCeee-eCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCC----------------CC-CCH-
Q 010854 382 RADDTMN-LGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG----------------FT-SQP- 442 (499)
Q Consensus 382 R~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~----------------~~-~~~- 442 (499)
|.||+|| .+|++|+|.+||+++. .||.|.+++|++.+. . ..++|+|++... .. .+.
T Consensus 591 R~kdlIkls~Ge~I~p~eIE~~l~-~~p~V~~~~VvG~~~---~-~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~ 665 (746)
T PTZ00342 591 RSKGLVKLSQGEYIETDMLNNLYS-QISFINFCVVYGDDS---M-DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYL 665 (746)
T ss_pred cCCCeEEeCCCEEEchHHHHHHHh-cCCCccEEEEEccCC---c-cccEEEEECCHHHHHHHHHhcCCccccccCcccHH
Confidence 9999999 5899999999999996 899999999998532 2 578999987741 00 011
Q ss_pred ----------HHHHHHHHHHH-----HhhcCCceeeeEEEEcC-CC----CCCCCcHHHHHHHHHHHHhhhhhcc
Q 010854 443 ----------DKLKMIFSKAI-----QSKLNPLFKVSLVKVVP-EF----PRTASNKLLRRVLRDQIKHELSVRS 497 (499)
Q Consensus 443 ----------~~l~~~~~~~~-----~~~l~~~~~p~~~~~~~-~i----P~t~~GKv~r~~l~~~~~~~~~~~~ 497 (499)
.++.+.+.+.+ +..|+.|..+++|.+++ ++ -+|++.|+.|+.+.+.|+..++.-.
T Consensus 666 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~~i~ 740 (746)
T PTZ00342 666 EKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFIDQVK 740 (746)
T ss_pred HHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHHHHH
Confidence 11233333222 34799999999988885 33 2799999999999999997776543
No 50
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-57 Score=465.61 Aligned_cols=459 Identities=20% Similarity=0.220 Sum_probs=372.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++.++++.... ..+.+.....+.
T Consensus 53 ~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~ 126 (521)
T PRK06187 53 VKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPT 126 (521)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCC
Confidence 68999999999999999999999999999999999999999999999999999999987543 222333333322
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++........ ........+.+++..... .........+++++++|||||||.||++.++|.++........
T Consensus 127 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~ 200 (521)
T PRK06187 127 VRTVIVEGDGPAA-PLAPEVGEYEELLAAASD-----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVC 200 (521)
T ss_pred ccEEEEecCcccc-ccccccccHHHHhhcCCc-----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHH
Confidence 1112211111110 122445666666554322 1122345678999999999999999999999999998888877
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..++++.+|++++.+|++|.+++...+.+++.|+++++.+.. ++..+++.++++++|.++++|++++.|.+.......+
T Consensus 201 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 279 (521)
T PRK06187 201 AWLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVD 279 (521)
T ss_pred HhhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccC
Confidence 788999999999999999999988766699999999998754 8889999999999999999999999999988776777
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCC-----CccccccccCCCceEEEECCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
++++|.++++|+.++.++.+++.+.+ ++.+++.||+||++..+........ ....++|.|++++.++|+|+++.
T Consensus 280 ~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~ 358 (521)
T PRK06187 280 FSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGD 358 (521)
T ss_pred cchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCC
Confidence 89999999999999999999998877 8899999999999876555443322 25678999999999999999999
Q ss_pred CCCC--CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCcee
Q 010854 317 PYPD--DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIK 393 (499)
Q Consensus 317 ~~~~--g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~ 393 (499)
+++. |+ .|||++ ++....+ +..+++.+...+. ++||+|||+++++++|++++.||.+|+++.+|.+
T Consensus 359 ~~~~~~g~--~Gel~v~~~~~~~~--y~~~~~~~~~~~~-------~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~ 427 (521)
T PRK06187 359 ELPPDGGE--VGEIIVRGPWLMQG--YWNRPEATAETID-------GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGEN 427 (521)
T ss_pred CCCCCCCC--eeEEEEECcchhhh--hcCCHHHHHHHhh-------CCceeccceEEEcCCCCEEEeecccceEEcCCeE
Confidence 9988 77 599999 4433322 2222222222222 2499999999999999999999999999999999
Q ss_pred echHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCC
Q 010854 394 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFP 473 (499)
Q Consensus 394 v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP 473 (499)
++|.+||+++. .+++|.++++++.+++..+ +.+++++++.++...+.+++.++ +.+.|+.++.|..++++++||
T Consensus 428 v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----l~~~l~~~~~p~~i~~v~~~P 501 (521)
T PRK06187 428 IYPRELEDALY-GHPAVAEVAVIGVPDEKWG-ERPVAVVVLKPGATLDAKELRAF----LRGRLAKFKLPKRIAFVDELP 501 (521)
T ss_pred ECHHHHHHHHH-hCCCceEEEEEeccCCCcC-ceEEEEEEECCCCCCCHHHHHHH----HHHhccCCCCceEEEEccCCC
Confidence 99999999996 8999999999999887777 88999999887666566555555 556889999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHh
Q 010854 474 RTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 474 ~t~~GKv~r~~l~~~~~~ 491 (499)
+|++||++|+.|+++|++
T Consensus 502 ~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 502 RTSVGKILKRVLREQYAE 519 (521)
T ss_pred CCCCCCeeHHHHHHHHhc
Confidence 999999999999999875
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.5e-57 Score=466.99 Aligned_cols=468 Identities=21% Similarity=0.240 Sum_probs=366.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++++.... ....+.+.........
T Consensus 71 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~ 149 (547)
T PRK06087 71 IEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQ-TRPVDLILPLQNQLPQ 149 (547)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEeccccc-ccHHHHHHHHHhhCCC
Confidence 689999999999999999999999999999999999999999999999999999999764311 0111112222222221
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++...... ......++.++...... . ........+++++++|||||||.||+|.++|.++........
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~---~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~ 220 (547)
T PRK06087 150 LQQIVGVDKLA----PATSSLSLSQIIADYEP--L---TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYC 220 (547)
T ss_pred CcEEEEeCCcC----CCcCccCHHHHhccCCc--c---cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 11121111111 01122355555543221 1 112235678999999999999999999999999988887777
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..+++.++|++++.+|++|.++++. ++.+++.|+++++.+ ..++..+++.++++++|+++++|+++..+++.......
T Consensus 221 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~ 299 (547)
T PRK06087 221 ARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPA 299 (547)
T ss_pred HhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCC
Confidence 7778899999999999999999875 888899999999986 56788999999999999999999888888877665666
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-CCccccccccCCCceEEEECCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
+++++|.+++||+++++++.+.+.. . ++++++.||+||++.......... .....++|.|++++.++++|+++.+++
T Consensus 300 ~~~~lr~i~~gG~~~~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 377 (547)
T PRK06087 300 DLSALRFFLCGGTTIPKKVARECQQ-R-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLP 377 (547)
T ss_pred CCCCeEEEEEcCCCCCHHHHHHHHH-c-CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCc
Confidence 7889999999999999998887764 3 789999999999987655433221 223457899999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ .||+++ ++..+.+ ++.+++.....+ ..++||+|||+++++++|++++.||.+|+|+.+|.+|+|.+
T Consensus 378 ~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~ 447 (547)
T PRK06087 378 PGC--EGEEASRGPNVFMG--YLDEPELTARAL------DEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSRE 447 (547)
T ss_pred CCC--cceEEEeccccccc--ccCCHHHHHHHh------CCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHH
Confidence 998 499999 5443332 222222222222 24579999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecC-CCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK-GFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
||+++. .+++|.++++++.+++..+ +++++++++.+ +...+.+++.++++ .+.++.|+.|..|.++++||+|++
T Consensus 448 iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~l~~~~~P~~i~~v~~iP~t~s 522 (547)
T PRK06087 448 VEDILL-QHPKIHDACVVAMPDERLG-ERSCAYVVLKAPHHSLTLEEVVAFFS---RKRVAKYKYPEHIVVIDKLPRTAS 522 (547)
T ss_pred HHHHHH-hCCCeeEEEEEecCCCCcC-ceEEEEEEECCCCCCCCHHHHHHHHH---hccccccCCCeEEEEeccCCCCCC
Confidence 999996 8999999999999988777 89999999875 33344455555433 357999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhhhcc
Q 010854 478 NKLLRRVLRDQIKHELSVRS 497 (499)
Q Consensus 478 GKv~r~~l~~~~~~~~~~~~ 497 (499)
||++|++|++.+.+++...+
T Consensus 523 GK~~r~~l~~~~~~~~~~~~ 542 (547)
T PRK06087 523 GKIQKFLLRKDIMRRLTQDV 542 (547)
T ss_pred CcCcHHHHHHHHHHHhhhhh
Confidence 99999999999999876553
No 52
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.5e-57 Score=468.57 Aligned_cols=474 Identities=19% Similarity=0.200 Sum_probs=370.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC--
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-- 79 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++.+|+++.... ......+.+.....
T Consensus 65 i~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~ 143 (559)
T PRK08315 65 IEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKD-SDYVAMLYELAPELAT 143 (559)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccc-cchHHHHHHhhhhhhc
Confidence 689999999999999999999999999999999999999999999999999999999875311 00000011100000
Q ss_pred -----------CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCC-CCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010854 80 -----------PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIP 147 (499)
Q Consensus 80 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~ 147 (499)
.....++..... ...+...+.++........ ............+++++++|||||||.||+|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 218 (559)
T PRK08315 144 CEPGQLQSARLPELRRVIFLGDE-----KHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGAT 218 (559)
T ss_pred ccccccccccCCCceeEEeeccc-----CCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEE
Confidence 001111111111 1123355666654332100 00111122355789999999999999999999
Q ss_pred ecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH
Q 010854 148 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
++|+++...+......++++++|+++..+|++|.+++.. ++.++..|+++++.....++..+++.++++++|++.++|+
T Consensus 219 ~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 219 LTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred eeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchH
Confidence 999999988888777788999999999999999999876 8899999999997666678899999999999999999999
Q ss_pred HHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC--CCccccccccCC
Q 010854 227 LVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATM 304 (499)
Q Consensus 227 ~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~--~~~~~~~g~~~~ 304 (499)
++..++........+++++|.++++|+.++.++.+.+.+.++..++++.||+||++..++...... .....++|.|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~ 378 (559)
T PRK08315 299 MFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALP 378 (559)
T ss_pred HHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCC
Confidence 999988876666667899999999999999999998888876667999999999987655443322 234678999999
Q ss_pred CceEEEECCC-CCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecc
Q 010854 305 TAGLVILDEC-GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGR 382 (499)
Q Consensus 305 ~~~~~i~d~~-g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR 382 (499)
+++++|+|+. +++++.|+ .|||+| ++..+.+ ++.++..+...+ ..++||+|||+++++++|++++.||
T Consensus 379 ~~~v~i~d~~~~~~~~~g~--~GEl~v~g~~~~~g--y~~~~~~~~~~~------~~~~~~~TGD~~~~~~dg~~~~~GR 448 (559)
T PRK08315 379 HLEVKIVDPETGETVPRGE--QGELCTRGYSVMKG--YWNDPEKTAEAI------DADGWMHTGDLAVMDEEGYVNIVGR 448 (559)
T ss_pred CcEEEEEcCccCCcCCCCC--ceEEEEECchhhhh--hcCChhHHhhcC------CCCCCEEccceEEEcCCceEEEEee
Confidence 9999999966 99999999 499999 5443332 122222221111 2467999999999999999999999
Q ss_pred cCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcee
Q 010854 383 ADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFK 462 (499)
Q Consensus 383 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 462 (499)
.+|+++++|.+|+|.+||+++. .+++|.+++|+++.++..+ +.++++|+...+...+.+++.++ +.+.++.|+.
T Consensus 449 ~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----l~~~l~~~~~ 522 (559)
T PRK08315 449 IKDMIIRGGENIYPREIEEFLY-THPKIQDVQVVGVPDEKYG-EEVCAWIILRPGATLTEEDVRDF----CRGKIAHYKI 522 (559)
T ss_pred ccceEEECCEEEcHHHHHHHHH-hCCCceEEEEEecCCCCCC-eEEEEEEEeCCCCCCCHHHHHHH----HHhhcccccC
Confidence 9999999999999999999997 8999999999999988766 88889998876555455555554 5568899999
Q ss_pred eeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhhhcc
Q 010854 463 VSLVKVVPEFPRTASNKLLRRVLRDQIKHELSVRS 497 (499)
Q Consensus 463 p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~~~~ 497 (499)
|.+++++++||+|++||++|.+|++++......++
T Consensus 523 P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~~~~~ 557 (559)
T PRK08315 523 PRYIRFVDEFPMTVTGKIQKFKMREMMIEELGLQA 557 (559)
T ss_pred CcEEEEcccCCCCCCCceeHHHHHHHHHhhhchhh
Confidence 99999999999999999999999999887766554
No 53
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.5e-57 Score=462.72 Aligned_cols=447 Identities=19% Similarity=0.188 Sum_probs=358.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+.++++++|||+++|++++|+++.++.+++.++++..+++.++++....... . ..
T Consensus 47 ~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------~------~~ 114 (502)
T TIGR01734 47 LPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDA------V------GT 114 (502)
T ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccc------c------CC
Confidence 67899999999999999999999999999999999999999999999999999999987431100 0 00
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.+. ...++..... .........++++++++|||||||.||+|+++|.++...+.+..
T Consensus 115 ~~~~~~---------------~~~~~~~~~~-----~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~ 174 (502)
T TIGR01734 115 QIITLS---------------ALEQAETSGG-----PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWML 174 (502)
T ss_pred ceEEch---------------HhhhhhhhcC-----CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHH
Confidence 001000 0111111110 01112234578999999999999999999999999998888777
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC--CChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+++..+++++...|++|..++..++.+++.|+++++.+.. .++..+++.++++++|.+.++|++++.++.......
T Consensus 175 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~ 254 (502)
T TIGR01734 175 ADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQ 254 (502)
T ss_pred HhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccccc
Confidence 778889999999999999999998899999999999988753 356889999999999999999999988776554455
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC----CCCccccccccCCCceEEEECCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~i~d~~g 315 (499)
..+++++.++++|++++.++.+.+.+.++++.+++.||+||++..+...... ......++|.+.++++++|+|+++
T Consensus 255 ~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~ 334 (502)
T TIGR01734 255 ENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEG 334 (502)
T ss_pred ccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCC
Confidence 5678999999999999999999999888889999999999987644432211 222345799999999999999999
Q ss_pred CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 316 VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
.+++.|+ .||+++ ++..+.++ ..+++.+...+. ...+.+||+|||+|++|++ +++++||.+|+|+++|++|
T Consensus 335 ~~~~~g~--~Gel~v~g~~~~~gy--~~~~~~~~~~~~---~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v 406 (502)
T TIGR01734 335 EPLPEGE--KGEIVIVGPSVSKGY--LNNPEKTAEAFF---SHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRI 406 (502)
T ss_pred CCCCCCC--eeEEEEccccccccc--cCCcccchHhhe---eCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEe
Confidence 9999998 599999 55444332 222332222221 1245679999999999976 9999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeC-CCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVS-PAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFP 473 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP 473 (499)
+|.+||+++. .+|+|.+++++++. +.... +.++++|++......+..++.+.+++.++++|+.|+.|..++++++||
T Consensus 407 ~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP 484 (502)
T TIGR01734 407 ELEDIEFNLR-QSSYIESAVVVPKYNKDHKV-EYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLP 484 (502)
T ss_pred CHHHHHHHHH-cCCCccEEEEEEEEcCCCCc-eEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccC
Confidence 9999999997 89999999999976 33334 788899988765444445666778888999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHH
Q 010854 474 RTASNKLLRRVLRDQIK 490 (499)
Q Consensus 474 ~t~~GKv~r~~l~~~~~ 490 (499)
+|++||++|++|++.+.
T Consensus 485 ~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 485 LTANGKIDRKALAEEVN 501 (502)
T ss_pred CCCCCcccHHHHHHhhc
Confidence 99999999999998764
No 54
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-57 Score=469.08 Aligned_cols=471 Identities=16% Similarity=0.156 Sum_probs=361.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.+|+++... ..+.......+.
T Consensus 61 ~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~ 134 (576)
T PRK05620 61 ITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPC 134 (576)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCcc
Confidence 67899999999999999999999999999999999999999999999999999999987532 222222222222
Q ss_pred ce-EEecccCCC----CCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 82 KA-IVLPAIGND----VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 82 ~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
.. +++...... ..........+|.++...... ........++++++++|||||||.||+|+++|+++...
T Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~ 209 (576)
T PRK05620 135 VRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGRST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQ 209 (576)
T ss_pred ccEEEEecCcccccchhccccccccccHHHHhhcCCC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHH
Confidence 21 222111110 011112234567777653221 11222356789999999999999999999999988654
Q ss_pred hhhc--ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHcc
Q 010854 157 TAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 234 (499)
Q Consensus 157 ~~~~--~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 234 (499)
.... ...+++..++++++.+|++|.+++...+.++..|+++++.+..+++..+++.++++++|+++++|+++..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 289 (576)
T PRK05620 210 SLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVH 289 (576)
T ss_pred HHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHH
Confidence 4332 23467889999999999999999888888999999999887667889999999999999999999999988765
Q ss_pred CCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-------CCccccccccCCCce
Q 010854 235 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-------PQAFGAFSTATMTAG 307 (499)
Q Consensus 235 ~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-------~~~~~~~g~~~~~~~ 307 (499)
......+..++|.++++|+.+++.+.+.+...+ +.++++.||+||++.......... .....++|++.++++
T Consensus 290 ~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 368 (576)
T PRK05620 290 YLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLE 368 (576)
T ss_pred hhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCcee
Confidence 433333456899999999999999998887665 688999999999986544332211 012347899999999
Q ss_pred EEEECCCCCCCCC--CCCcceeeEe-ccccccccccccccccc----chhhcCCC------CCCCccccccCceeEeecC
Q 010854 308 LVILDECGVPYPD--DQPCVGEVGL-FPLYLGASDRLLNADHE----EVYFRGMP------MYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 308 ~~i~d~~g~~~~~--g~~~~Gei~v-~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~TGD~~~~~~~ 374 (499)
++++|+ |.+++. +. .||+++ ++..+.+ ++.+++.+ ...|...+ ....++||+|||+++++++
T Consensus 369 ~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~d 443 (576)
T PRK05620 369 YRIVND-GQVMESTDRN--EGEIQVRGNWVTAS--YYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRD 443 (576)
T ss_pred EEEecC-CccccCCCCC--ceEEEEEcCccccc--ccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCC
Confidence 999997 776643 44 599999 5444432 22222222 12222111 1234689999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ 454 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 454 (499)
|++++.||.+|+|+++|.+|+|.+||++|. .||.|.+++|++.+++..+ +.++++++..++...+. ...+.++++++
T Consensus 444 g~l~~~GR~~d~i~~~G~~i~~~eIE~~l~-~~p~v~~~~vv~~~~~~~g-~~~~a~v~~~~~~~~~~-~~~~~l~~~l~ 520 (576)
T PRK05620 444 GFLTIHDRARDVIRSGGEWIYSAQLENYIM-AAPEVVECAVIGYPDDKWG-ERPLAVTVLAPGIEPTR-ETAERLRDQLR 520 (576)
T ss_pred ceEEEEechhhhhhcCCEEEcHHHHHHHHh-cCCCceEEEEEeccCCCcC-ceeEEEEEecCCCCccc-ccHHHHHHHHH
Confidence 999999999999999999999999999997 8999999999999998887 88888888876543221 12345666677
Q ss_pred hhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 455 SKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 455 ~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++|+.|+.|..++++++||+|++||++|++|++++++.
T Consensus 521 ~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 521 DRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred hhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcC
Confidence 89999999999999999999999999999999998864
No 55
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.9e-57 Score=466.90 Aligned_cols=467 Identities=21% Similarity=0.216 Sum_probs=343.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC--
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-- 79 (499)
+++||+|+|+++|++++++++|||+++|++++|+++..+.+++.++|+.++++++|++++.. +....+....
T Consensus 61 l~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 134 (579)
T PLN03102 61 ITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSS 134 (579)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccc
Confidence 68999999999999999999999999999999999999999999999999999999987532 1222221111
Q ss_pred -----CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 80 -----PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 80 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
....+++..... .........++.++.......+...........++++++++|||||||.||+|+++|.++.
T Consensus 135 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~ 212 (579)
T PLN03102 135 EDSNLNLPVIFIHEIDF--PKRPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAY 212 (579)
T ss_pred cccccCceEEEeccccc--ccCCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHH
Confidence 112222211110 0011123456666655432211110011112356899999999999999999999999865
Q ss_pred HHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHcc
Q 010854 155 RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 234 (499)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 234 (499)
...........+...+++++.+|++|..++...+.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 291 (579)
T PLN03102 213 LSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMR-HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKG 291 (579)
T ss_pred HHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeec-cCChHHHHHHHHHcCCeEEEeChHHHHHHHhC
Confidence 54443333445677788999999999999887778889999999886 45678899999999999999999999999887
Q ss_pred CCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC-------------CCccccccc
Q 010854 235 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-------------PQAFGAFST 301 (499)
Q Consensus 235 ~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~-------------~~~~~~~g~ 301 (499)
........++++.++++|+.+++.+..++.. + +..+++.||+||+++.+....... ....+..+.
T Consensus 292 ~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 369 (579)
T PLN03102 292 NSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSIL 369 (579)
T ss_pred cccccCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCccccccccccccccCCcccccccccCCCcccc
Confidence 5444444567888999999999888888754 4 788999999999886433221100 001122223
Q ss_pred cCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEE
Q 010854 302 ATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIV 379 (499)
Q Consensus 302 ~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~ 379 (499)
+.+ .+++.| +.+++++.+....|||+| ++..+.+ ++.+++.+...| .++||+|||+|++|++|++++
T Consensus 370 ~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~G--Y~~~~~~t~~~f-------~~gw~~TGDlg~~d~dG~l~i 438 (579)
T PLN03102 370 GLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKG--YLKNPKATSEAF-------KHGWLNTGDVGVIHPDGHVEI 438 (579)
T ss_pred ccc--ceEEeccccccccCCCCCCceEEEEECcchhhh--hcCChhhhHhhh-------ccCceecCceEEEcCCCeEEE
Confidence 333 456666 556666642111599999 5444432 222333333333 246999999999999999999
Q ss_pred ecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHH------HHHHHHHHH
Q 010854 380 QGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDK------LKMIFSKAI 453 (499)
Q Consensus 380 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------l~~~~~~~~ 453 (499)
.||.+|+|+++|++|+|.+||+++. .||.|.+++|++++++..+ +.++++|++.++...+... -...+++.+
T Consensus 439 ~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~a~vv~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 516 (579)
T PLN03102 439 KDRSKDIIISGGENISSVEVENVLY-KYPKVLETAVVAMPHPTWG-ETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYC 516 (579)
T ss_pred EeccCcEEEECCEEECHHHHHHHHH-hCCCcceeEEEeccCcccc-ceeEEEEEecCcccccccccccccccHHHHHHHH
Confidence 9999999999999999999999997 8999999999999998887 8999999987654332111 123466667
Q ss_pred HhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 454 QSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 454 ~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+++|+.|+.|..+++++++|+|++||++|++|++++.+.
T Consensus 517 ~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 517 RENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred HhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHHh
Confidence 788999999999999999999999999999999988663
No 56
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-57 Score=464.55 Aligned_cols=461 Identities=21% Similarity=0.215 Sum_probs=364.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++..++++++++.+++++... ..........+.
T Consensus 64 ~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 137 (542)
T PRK07786 64 VGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPL 137 (542)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCc
Confidence 67899999999999999999999999999999999999999999999999999999987532 111111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++..... ......+++++...... .........+++++++|||||||.||+|.++|+++...+....
T Consensus 138 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 207 (542)
T PRK07786 138 LSTVVVAGGS-----SDDSVLGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCL 207 (542)
T ss_pred cceEEEecCC-----CcccccCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHH
Confidence 1111111110 01133566666543322 1112234567899999999999999999999999988877666
Q ss_pred eeccC-cCCcEEEeecCccccchhhhhhhhhccCcEEEecC-CCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~-~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+++ ..++++++..|++|.+++..++.++..|+++++.+ ...++..+++.++++++|.+.++|+++..+........
T Consensus 208 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~ 287 (542)
T PRK07786 208 RTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP 287 (542)
T ss_pred HhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc
Confidence 66666 67889999999999999888999999999999865 24578899999999999999999999999988765444
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC-CCCccccccccCCCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
.+ .++|.+++||+++++++.+.+.+.+++..+++.||+||++.+.+..... .....+++|+|++++.++|+|+++.++
T Consensus 288 ~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~ 366 (542)
T PRK07786 288 RD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDV 366 (542)
T ss_pred cC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCC
Confidence 33 3799999999999999999999888889999999999998654433222 223457899999999999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
+.|+ +|||++ ++..+.+ ++.+++.+...|. ++||+|||+++++++|++++.||.+|+|+++|.+|+|.
T Consensus 367 ~~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~f~-------~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~ 435 (542)
T PRK07786 367 PVGE--VGEIVYRAPTLMSG--YWNNPEATAEAFA-------GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCA 435 (542)
T ss_pred cCCC--ceEEEEEChhhhhh--hcCCHHHHHHHhh-------CCcccccceEEEcCCceEEEEecccceEEeCCEEECHH
Confidence 9998 599999 5544432 2223333332331 46999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
+||+++. .+++|.+++|++..+...+ +.++++++..++.. ... +.+.+.++++++.|+.|..++++++||+|+
T Consensus 436 eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~ 509 (542)
T PRK07786 436 EVENVLA-SHPDIVEVAVIGRADEKWG-EVPVAVAAVRNDDAALTL----EDLAEFLTDRLARYKHPKALEIVDALPRNP 509 (542)
T ss_pred HHHHHHH-hCCCccEEEEEeccCcccC-ceEEEEEEECCCCCCCCH----HHHHHHHHhhccCCCCCCEEEEeccCCCCC
Confidence 9999996 8999999999998877776 88888888765432 233 345555777899999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhhhhc
Q 010854 477 SNKLLRRVLRDQIKHELSVR 496 (499)
Q Consensus 477 ~GKv~r~~l~~~~~~~~~~~ 496 (499)
+||++|++|++.+.+....+
T Consensus 510 ~GKv~r~~L~~~~~~~~~~~ 529 (542)
T PRK07786 510 AGKVLKTELRERYGACVNVE 529 (542)
T ss_pred cccccHHHHHHHHHhhhchh
Confidence 99999999999998876554
No 57
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=6.5e-57 Score=462.16 Aligned_cols=451 Identities=19% Similarity=0.199 Sum_probs=353.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC-C
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~ 80 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++..++++++++.++++..... .+....... .
T Consensus 68 i~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~ 141 (542)
T PRK06155 68 VKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLP 141 (542)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccC
Confidence 689999999999999999999999999999999999999999999999999999999875421 111111111 1
Q ss_pred CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 81 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
....+.. ..... . .....+..... ... ..........++++++++|||||||.||+|+++|+++.......
T Consensus 142 ~~~~~~~-~~~~~-~---~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~ 212 (542)
T PRK06155 142 LPAVWLL-DAPAS-V---SVPAGWSTAPL-PPL---DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNS 212 (542)
T ss_pred cceEEEe-cCccc-c---ccccccchhhh-ccc---CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHH
Confidence 1111111 11100 0 00011111100 000 01111223467899999999999999999999999998887777
Q ss_pred ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
...+++++++++++.+|++|..++..++.+++.|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......
T Consensus 213 ~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 291 (542)
T PRK06155 213 AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESD 291 (542)
T ss_pred HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcccc
Confidence 77788999999999999999999988899999999999876 46789999999999999999999999999888766666
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
..++++.++.+| +++.+...+.+.+ +..+++.||+||++..+.... .....+++|.+.++++++|+|+++++++.
T Consensus 292 ~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~ 366 (542)
T PRK06155 292 RAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPD 366 (542)
T ss_pred ccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCC
Confidence 677898877666 4577777777665 788999999999987654432 23456789999999999999999999999
Q ss_pred CCCcceeeEe-ccc---ccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeech
Q 010854 321 DQPCVGEVGL-FPL---YLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 396 (499)
Q Consensus 321 g~~~~Gei~v-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~ 396 (499)
|+ .|||++ ++. .+.+ +..+++.+...+ .++||+|||+|+++++|++++.||.+|+|+++|.+|+|
T Consensus 367 g~--~Gei~v~~~~~~~~~~G--Y~~~~~~~~~~~-------~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p 435 (542)
T PRK06155 367 GE--PGELLLRADEPFAFATG--YFGMPEKTVEAW-------RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISS 435 (542)
T ss_pred CC--ceEEEEecCCccccchh--hcCCHHHHHHhh-------cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECH
Confidence 98 599999 431 2222 222222222222 25799999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCC
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
.+||+++. .+|+|.+++|++++++..+ +.+.++++...+...+..++.++ +.++|+.|+.|..|++++++|+|+
T Consensus 436 ~eIE~~l~-~~~~V~~~~v~~v~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~----~~~~l~~~~~P~~i~~~~~iP~t~ 509 (542)
T PRK06155 436 FEVEQVLL-SHPAVAAAAVFPVPSELGE-DEVMAAVVLRDGTALEPVALVRH----CEPRLAYFAVPRYVEFVAALPKTE 509 (542)
T ss_pred HHHHHHHH-hCCCeeEEEEEeecccccC-ceEEEEEEECCCCCCCHHHHHHH----HHhhCcCccCCcEEEEeccCCCCc
Confidence 99999996 8999999999999987777 78888888877666666555555 556889999999999999999999
Q ss_pred CcHHHHHHHHHHHH
Q 010854 477 SNKLLRRVLRDQIK 490 (499)
Q Consensus 477 ~GKv~r~~l~~~~~ 490 (499)
+||++|++|++++-
T Consensus 510 ~GKi~r~~l~~~~~ 523 (542)
T PRK06155 510 NGKVQKFVLREQGV 523 (542)
T ss_pred ccceeHHHHHhhcc
Confidence 99999999998764
No 58
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-57 Score=457.29 Aligned_cols=437 Identities=20% Similarity=0.241 Sum_probs=347.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+++++.+++++++++.+|+++.....
T Consensus 44 ~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~---------------- 107 (488)
T PRK09088 44 CVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAG---------------- 107 (488)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhcc----------------
Confidence 5789999999999999999999999999999999999999999999999999999998743210
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
......++++...... . ..........+++++++|||||||.||++.++|+++...+....
T Consensus 108 ----------------~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~ 168 (488)
T PRK09088 108 ----------------RTDVEDLAAFIASADA--L-EPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFG 168 (488)
T ss_pred ----------------cccccchhhhhhhccc--c-ccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 0001122222211111 0 01111234568899999999999999999999999987776666
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHH--HhCCeEEecchHHHHHHHccCCCC
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~--~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
....+..+|++++.+|++|.+++.. ++.++..|+++++.+ .+.+..++..+. ++++|+++++|++++.+.+.....
T Consensus 169 ~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~ 247 (488)
T PRK09088 169 VLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFD 247 (488)
T ss_pred HhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcC
Confidence 5567889999999999999999876 778888899988875 456777777775 489999999999999998775545
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC--CCCccccccccCCCceEEEECCCCC
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
...+++++.+++||++++......+... ++.+++.||+||++.+....... .....+++|.|.|+++++|+|+++.
T Consensus 248 ~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~ 325 (488)
T PRK09088 248 AAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGN 325 (488)
T ss_pred ccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCC
Confidence 5567899999999999988877666543 78899999999998654322111 1234578999999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeec
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 395 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~ 395 (499)
+++.|+ .|||++ ++..+.+ +..+++.+...+ .+++||+|||+|+++++|++++.||.+|+|+.+|.+|+
T Consensus 326 ~~~~g~--~Gel~v~~~~~~~g--Y~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~ 395 (488)
T PRK09088 326 DCPAGV--PGELLLRGPNLSPG--YWRRPQATARAF------TGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVY 395 (488)
T ss_pred CCcCCC--ceEEEEECCccchh--hcCChhhhhhhh------cCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEEC
Confidence 999998 499999 5544332 111222222112 34689999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t 475 (499)
|.+||++|. .+++|.++++++++++..+ +..++++++.++...+.+++.+ .+++.++.|+.|..++++++||+|
T Consensus 396 ~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~p~~i~~~~~iP~t 469 (488)
T PRK09088 396 PAEIEAVLA-DHPGIRECAVVGMADAQWG-EVGYLAIVPADGAPLDLERIRS----HLSTRLAKYKVPKHLRLVDALPRT 469 (488)
T ss_pred HHHHHHHHH-hCCCcceEEEEeCCCccCC-ceeEEEEEECCCCCCCHHHHHH----HHHhhCcCCCCCCEEEEcccCCCC
Confidence 999999996 8999999999999987777 7888888887654444444444 466788999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhh
Q 010854 476 ASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~~ 492 (499)
++||++|++|++++.+.
T Consensus 470 ~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 470 ASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCceeHHHHHHHHHhc
Confidence 99999999999988754
No 59
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.1e-57 Score=515.47 Aligned_cols=469 Identities=16% Similarity=0.130 Sum_probs=354.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC--
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-- 79 (499)
+++||+|+|+++|++++++++|||+++|++++|++|.++++++.+++++++++.+|++.... .............
T Consensus 292 v~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~---~~~~~~~~~~~~~~~ 368 (1389)
T TIGR03443 292 IKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAG---TLDQLVRDYIDKELE 368 (1389)
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEecccc---ccchhhhhhhhcccc
Confidence 68999999999999999999999999999999999999999999999999999999876320 0001111110000
Q ss_pred --CCc-eEEecccCCCCCCCCCcCCCC--HHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 80 --PLK-AIVLPAIGNDVGIPLREQDLS--WKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 80 --~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
... .+.+...... ...... ..++...... ...........++++++++|||||||.||||+++|+++.
T Consensus 369 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~ 441 (1389)
T TIGR03443 369 LRTEIPALALQDDGSL-----VGGSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLA 441 (1389)
T ss_pred cccccceEEecccccc-----cccccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHH
Confidence 000 0111000000 000000 0011110000 000111123457899999999999999999999999999
Q ss_pred HHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCC--ChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 155 RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~--~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
+.+.+....+++.++|+++...|++|..++..++.+++.|+++++.+... ++..+++.|+++++|++.++|++++.|.
T Consensus 442 ~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~ 521 (1389)
T TIGR03443 442 YYFPWMAKRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLS 521 (1389)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 99888888888999999999999999999888999999999999986432 4678999999999999999999999887
Q ss_pred ccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----------CCcccccccc
Q 010854 233 NTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTA 302 (499)
Q Consensus 233 ~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----------~~~~~~~g~~ 302 (499)
... ...++++|.++++|+++++.....+....++.++++.||+||++.......... .....++|.|
T Consensus 522 ~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 598 (1389)
T TIGR03443 522 AQA---TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKG 598 (1389)
T ss_pred hcc---cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCc
Confidence 543 234789999999999999998888877777889999999999876544322110 1124578999
Q ss_pred CCCceEEEECC--CCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCC----------------------C
Q 010854 303 TMTAGLVILDE--CGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPM----------------------Y 357 (499)
Q Consensus 303 ~~~~~~~i~d~--~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 357 (499)
+++++++|+|+ .+++++.|+ +|||+| ++..+.+ ++.+++.+...|...+. .
T Consensus 599 ~~~~~~~ivd~~~~~~~~~~G~--~GEL~i~G~~v~~G--Y~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1389)
T TIGR03443 599 MKNVQLLVVNRNDRTQTCGVGE--VGEIYVRAGGLAEG--YLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLG 674 (1389)
T ss_pred cCCCEEEEECCccCCCcCCCCC--ceEEEecccccchh--cCCChhHhhhhccCCcccCcccccccccccccccccccCC
Confidence 99999999994 457899998 599999 6554443 33345555444432221 1
Q ss_pred CCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCC
Q 010854 358 KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG 437 (499)
Q Consensus 358 ~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~ 437 (499)
.+++||+|||+|++++||+|+++||.||+||++|++|+|.|||++|. .||.|.+++|++..+...+ +.+++++++..+
T Consensus 675 ~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~-~~lva~vv~~~~ 752 (1389)
T TIGR03443 675 PRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE-PTLVSYIVPQDK 752 (1389)
T ss_pred CccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC-eEEEEEEeccCc
Confidence 24689999999999999999999999999999999999999999996 8999999999988877666 889999987632
Q ss_pred CC-CC---------------------HHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHH
Q 010854 438 FT-SQ---------------------PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 489 (499)
Q Consensus 438 ~~-~~---------------------~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~ 489 (499)
.. .. ..+..+.++++++++|+.|++|..++++++||+|++|||+|++|+..+
T Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 753 SDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred cccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 11 00 012345677778899999999999999999999999999999997543
No 60
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5e-58 Score=550.42 Aligned_cols=445 Identities=16% Similarity=0.158 Sum_probs=365.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++........ .....
T Consensus 3142 v~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~---------~~~~~ 3212 (3956)
T PRK12467 3142 VGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLP---------APAGD 3212 (3956)
T ss_pred CCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcc---------cccCC
Confidence 789999999999999999999999999999999999999999999999999999999875321100 00000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.+. +..... ...........++++|+++|||||||.||||+++|+++.+.+.+..
T Consensus 3213 ~~~~~~------------------~~~~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 3270 (3956)
T PRK12467 3213 TALTLD------------------RLDLNG----YSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIA 3270 (3956)
T ss_pred ceeeec------------------chhhcc----cCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHH
Confidence 111110 000000 0111122345689999999999999999999999999999999888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++++|+++.+.|++|..+...++.+++.|+++++.+. ..+++.+++.|+++++|++.++|+++..+++... ..
T Consensus 3271 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~ 3348 (3956)
T PRK12467 3271 EAYELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GA 3348 (3956)
T ss_pred HhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--cc
Confidence 88999999999999999999998889999999999999873 1578899999999999999999999999987543 34
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----CCccccccccCCCceEEEECCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
+++++|.+++|||++++++.+.+...++++.+++.||+||++..++...... .....++|+|+++++++|+|+.++
T Consensus 3349 ~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 3428 (3956)
T PRK12467 3349 DCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLN 3428 (3956)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCC
Confidence 5788999999999999999999887777788999999999987655332211 123468999999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCC-CCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
+++.|+ +|||+| +++...+ ++.+++.+...|...++ ..+.+||+|||+|++++||+|+++||.||+||++|++|
T Consensus 3429 ~vp~G~--~GEL~i~G~~v~~G--Y~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rI 3504 (3956)
T PRK12467 3429 PVPVGV--AGELYIGGVGLARG--YHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRI 3504 (3956)
T ss_pred CCCCCC--CceEEEcchhhhhh--ccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEee
Confidence 999999 599999 6655543 44456666666665555 46788999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.|||++|. ++|+|.+++|+...+ ..+ +++++||+......... +.++++++++|+.|+.|..++++++||+
T Consensus 3505 e~~EIE~~l~-~~p~V~~a~v~~~~~-~~~-~~lva~v~~~~~~~~~~----~~l~~~l~~~Lp~y~vP~~~~~l~~lP~ 3577 (3956)
T PRK12467 3505 ELGEIEARLL-QHPSVREAVVLARDG-AGG-KQLVAYVVPADPQGDWR----ETLRDHLAASLPDYMVPAQLLVLAAMPL 3577 (3956)
T ss_pred cHHHHHHHHh-hCcccceEEEEEecC-CCC-cEEEEEEeCCCCCcccH----HHHHHHHhccCChhhCCCeeeeeccCCC
Confidence 9999999996 899999999998754 345 88999999876433333 3455557789999999999999999999
Q ss_pred CCCcHHHHHHHHHHHH
Q 010854 475 TASNKLLRRVLRDQIK 490 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~ 490 (499)
|++||++|++|++...
T Consensus 3578 t~~GKidR~~L~~~~~ 3593 (3956)
T PRK12467 3578 GPNGKVDRKALPDPDA 3593 (3956)
T ss_pred CCCCccchhhcCCCCc
Confidence 9999999999987543
No 61
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-56 Score=456.92 Aligned_cols=445 Identities=20% Similarity=0.178 Sum_probs=356.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+++++..... . ....
T Consensus 49 ~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~-~~~~ 117 (497)
T PRK06145 49 IGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAI----------V-ALET 117 (497)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhh----------h-hccc
Confidence 6789999999999999999999999999999999999999999999999999999998753210 0 0001
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+... .. ..+..+..... .........++++++++|||||||.||+|+++|+++...+....
T Consensus 118 ~~~~~~~~-~~---------~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 182 (497)
T PRK06145 118 PKIVIDAA-AQ---------ADSRRLAQGGL-----EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHV 182 (497)
T ss_pred ceEEecCc-cc---------chhHHHhccCC-----CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 11111100 00 01111111100 01112234678999999999999999999999999887666665
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..+++..+++++...|++|.+++.. .+.+++.|+++++.+ .+++..+++.++++++|++.++|+++..++........
T Consensus 183 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~ 261 (497)
T PRK06145 183 IALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRF 261 (497)
T ss_pred HhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcccc
Confidence 6678899999999999999998865 677889999998876 56889999999999999999999999999987766667
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC-CCCccccccccCCCceEEEECCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
+++++|.+++||++++..+.+++...+.+..+++.||+||++......... .....+++|+|+++++++++|+++++++
T Consensus 262 ~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~ 341 (497)
T PRK06145 262 DLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLP 341 (497)
T ss_pred ccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCC
Confidence 788999999999999999999998888778899999999998754433222 2234578999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ .||+++ ++..+.+ ++.+++.+...+. ++||+|||+++++++|++++.||.+|+||++|.+++|.+
T Consensus 342 ~~~--~Gel~v~g~~~~~G--y~~~~~~~~~~~~-------~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ 410 (497)
T PRK06145 342 PNM--KGEICMRGPKVTKG--YWKDPEKTAEAFY-------GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSE 410 (497)
T ss_pred CCC--ceEEEEECcchhhh--hcCChHHHHHHHh-------CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHH
Confidence 998 599999 5443332 2222222222221 469999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||++|. .+++|.+++|++.+++..+ +.+++++++.++...+.+++.++ ++++|++|+.|..++++++||+|++|
T Consensus 411 IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~p~~i~~v~~iP~t~~G 484 (497)
T PRK06145 411 VERVIY-ELPEVAEAAVIGVHDDRWG-ERITAVVVLNPGATLTLEALDRH----CRQRLASFKVPRQLKVRDELPRNPSG 484 (497)
T ss_pred HHHHHH-hCCCeeEEEEEecCCCccC-ceEEEEEEECCCCCCCHHHHHHH----HHHhhhcCCCCCEEEEeccCCCCCcc
Confidence 999996 8999999999999988777 88999999876555555555554 55678899999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 010854 479 KLLRRVLRDQIK 490 (499)
Q Consensus 479 Kv~r~~l~~~~~ 490 (499)
|++|++|++++.
T Consensus 485 Ki~r~~l~~~~~ 496 (497)
T PRK06145 485 KVLKRVLRDELN 496 (497)
T ss_pred cccHHHHHHHhc
Confidence 999999998764
No 62
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=8.4e-57 Score=460.77 Aligned_cols=454 Identities=19% Similarity=0.194 Sum_probs=352.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++++++..+.+++.++++.++++.++++..... ..............+.
T Consensus 70 ~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~ 148 (527)
T TIGR02275 70 IGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSL-FDYDAFARQLQSKLPT 148 (527)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccc-cchHHHHHHHHhhCCc
Confidence 679999999999999999999999999999999999999999999999999999999864210 0000001111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++...... ........+..... ........++++++++|||||||.||+|.++|.++..++....
T Consensus 149 ~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 216 (527)
T TIGR02275 149 LRNIIVAGQTR-------VEAELFLWLESPAE-----PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV 216 (527)
T ss_pred ceEEEEecCCC-------CcchhhHHhhCcCc-----cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH
Confidence 11111111000 00111111111111 1112244678999999999999999999999999998888777
Q ss_pred eeccCcCCcEEEeecCccccchhhh--hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI--LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+.++.+|+++..+|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++.++|+++..|.+......
T Consensus 217 ~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 295 (527)
T TIGR02275 217 EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSR 295 (527)
T ss_pred hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccC
Confidence 7788899999999999999998763 788899999998865 5678899999999999999999999999988776666
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccC-CCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~g~~~ 318 (499)
.+++++|.+++||+.++.++...+.+.+ +.++++.||+||++..+............++|+|+ ++..++|+|++|+++
T Consensus 296 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~ 374 (527)
T TIGR02275 296 YDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPV 374 (527)
T ss_pred CCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCC
Confidence 7788999999999999999999988776 78899999999965433222211223446889999 589999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
+.|+ .|||++ ++..+.+ ++.+++.+...+ ..++||+|||+++++++|++++.||.+|+|+++|++|+|.
T Consensus 375 ~~g~--~Gei~v~g~~~~~g--Y~~~~~~~~~~~------~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ 444 (527)
T TIGR02275 375 APGE--TGMLLTRGPYTFRG--YYKAPEHNAAAF------DAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAE 444 (527)
T ss_pred CCCC--ceEEEecCCccchh--hcCChhHhHhhc------CcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHH
Confidence 9998 499999 5554432 222222222222 3467999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
+||++|. .+|+|.+++|++.++...+ +.++++|+..++ ..+..++.+++++ .+++.|+.|..++++++||+|++
T Consensus 445 eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~vv~~~~-~~~~~~l~~~l~~---~~l~~~~~P~~i~~v~~iP~t~s 518 (527)
T TIGR02275 445 EIENLLL-AHPAVHDAALVSMPDELLG-EKSCAFIVVRDP-ALKAAQLRRFLRE---RGLAEYKLPDRVEFIDSLPLTAV 518 (527)
T ss_pred HHHHHHH-hCCCceEEEEEecCCcccc-cEEEEEEEECCC-CCCHHHHHHHHHh---CCCccccCCCEEEEeccCCCCCc
Confidence 9999997 9999999999999998877 889999988765 3455555555432 25999999999999999999999
Q ss_pred cHHHHHHHH
Q 010854 478 NKLLRRVLR 486 (499)
Q Consensus 478 GKv~r~~l~ 486 (499)
||++|+.|+
T Consensus 519 GKv~r~~L~ 527 (527)
T TIGR02275 519 GKIDKKALR 527 (527)
T ss_pred cceeHHhcC
Confidence 999999874
No 63
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-57 Score=469.93 Aligned_cols=450 Identities=21% Similarity=0.204 Sum_probs=336.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEc-CCCCC--HHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 78 (499)
+++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|+++.... ........
T Consensus 89 ~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~------~~~~~~~~ 162 (612)
T PRK12476 89 AGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAE------AVEGFLRN 162 (612)
T ss_pred cCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHH------HHHHHHhh
Confidence 5899999999999999999999999999999999 56665 789999999999999999875321 11111111
Q ss_pred CC----CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 79 AP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 79 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
.. ...+.+. . . .... ..........++++++++|||||||.||||+++|+++.
T Consensus 163 ~~~~~~~~~i~~~--~-~---------------~~~~-----~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~ 219 (612)
T PRK12476 163 LPRLRRPRVIAID--A-I---------------PDSA-----GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVG 219 (612)
T ss_pred cccccCceEEEec--c-c---------------cccc-----cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHH
Confidence 11 1111111 0 0 0000 00111123456899999999999999999999999998
Q ss_pred HHhhhcceecc-CcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CC--ChhHHHHHHH--HhCCeEEecchHHH
Q 010854 155 RCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLV 228 (499)
Q Consensus 155 ~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~--~~~~~~~~i~--~~~~t~l~~~P~~l 228 (499)
..+......++ +.+++++++++|++|.+++...+.+++.|++++++.+ .+ ++..+++.++ +++++.+..+|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~ 299 (612)
T PRK12476 220 TNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFA 299 (612)
T ss_pred HHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHH
Confidence 77766655566 7888999999999999999876656566666666643 22 6788999995 58999999999998
Q ss_pred HHHHccCC----CCcccccceeEEEeecCCCChhhHHHHHhhcc-----cCceeccccccceeeeeecCCCCC-------
Q 010854 229 KAWRNTNC----LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQ------- 292 (499)
Q Consensus 229 ~~l~~~~~----~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yg~tE~~~~~~~~~~~~------- 292 (499)
..++.... ....+++++| +++||+++++++.+.+.+.+. ...+++.||+||++..+.......
T Consensus 300 ~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 378 (612)
T PRK12476 300 YEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYL 378 (612)
T ss_pred HHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEE
Confidence 88776421 1345688999 999999999999998887652 245999999999876543322110
Q ss_pred -------------------CCccccccccCCCceEEEECCC-CCCCCCCCCcceeeEe-cccccccccccccccccchhh
Q 010854 293 -------------------PQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYF 351 (499)
Q Consensus 293 -------------------~~~~~~~g~~~~~~~~~i~d~~-g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~ 351 (499)
....+++|+|+++++++|+|++ |++++.|+ .|||++ ++..+. +++.+++.+...|
T Consensus 379 ~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~--~GEl~v~g~~v~~--GY~~~~~~t~~~f 454 (612)
T PRK12476 379 DREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGE--VGEIWLHGDNIGR--GYWGRPEETERTF 454 (612)
T ss_pred cHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCC--EEEEEEcCCcccc--cccCChHHHHHHH
Confidence 0123578999999999999966 99999998 599999 554443 2444455554445
Q ss_pred cCCC------------CCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCcccee--eeEEE
Q 010854 352 RGMP------------MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAIS 417 (499)
Q Consensus 352 ~~~~------------~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~--~~v~~ 417 (499)
...+ ...+++||+|||+|+++ +|+|+++||.||+||++|++|+|.+||++|.+.||.|.+ +++++
T Consensus 455 ~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~ 533 (612)
T PRK12476 455 GAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFT 533 (612)
T ss_pred hhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEE
Confidence 3100 01234699999999985 999999999999999999999999999999645899999 67777
Q ss_pred eCCCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhhcCCcee-eeEEEEcC--CCCCCCCcHHHHHHHHHHHHh
Q 010854 418 VSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFK-VSLVKVVP--EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 418 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~-p~~~~~~~--~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++++. + +++++++++.++.. .+.+++.+++++++... |+. |..+++++ +||+|++||++|++|++++.+
T Consensus 534 ~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~---~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 534 VPAED-N-ERLVIVAERAAGTSRADPAPAIDAIRAAVSRR---HGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred ecCCC-c-ceEEEEEEecCCcccccHHHHHHHHHHHHHHh---hCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 77766 5 88899999877643 46677777777766543 455 57788876 699999999999999998754
No 64
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.8e-56 Score=456.67 Aligned_cols=450 Identities=20% Similarity=0.236 Sum_probs=358.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+..++..+++.++++++|+++... ..+..+......
T Consensus 50 ~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 123 (504)
T PRK07514 50 VKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGA 123 (504)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCC
Confidence 68999999999999999999999999999999999999999999999999999999987532 111111111111
Q ss_pred c-eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
. ...+.. . ....+.+..... +..........+++++++|||||||.||++.++|+++...+...
T Consensus 124 ~~~~~~~~--~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~ 188 (504)
T PRK07514 124 PHVETLDA--D--------GTGSLLEAAAAA-----PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTL 188 (504)
T ss_pred ceEEEecC--C--------CcccHHHhhhhc-----CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHH
Confidence 1 111110 0 111222222111 11122334567999999999999999999999999999888777
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
...++++.+|++++.+|++|..++.. ++.+++.|+++++.+ ..+++.+++.+ .++|++.++|+++..++.......
T Consensus 189 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~ 265 (504)
T PRK07514 189 VDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLP-KFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTR 265 (504)
T ss_pred HHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECC-CCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCc
Confidence 77778899999999999999999865 888999999999886 45788888888 479999999999999988766666
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~ 318 (499)
..++++|.+++||+++++++.+.+...+ +..+++.||+||++..... .........++|.|+++++++|+| ++++++
T Consensus 266 ~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~ 343 (504)
T PRK07514 266 EAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAEL 343 (504)
T ss_pred ccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCC
Confidence 6788999999999999999999988776 6789999999998864432 222233457899999999999999 999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
+.|+ .||+++ ++....+ ++.++..+...+ .+++||+|||+++++++|++++.||.+|+||++|.+|+|.
T Consensus 344 ~~g~--~Gel~i~~~~~~~g--y~~~~~~~~~~~------~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~ 413 (504)
T PRK07514 344 PPGE--IGMIEVKGPNVFKG--YWRMPEKTAEEF------RADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPK 413 (504)
T ss_pred CCCC--ceEEEEecCCcccc--ccCCchhhhhhc------ccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHH
Confidence 9998 499999 5544432 222222222222 2356999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
+||+++. .+++|.+++|++.+++..+ +.++++++...+...+.+++.+ .++++|+.++.|..+++++++|+|++
T Consensus 414 ~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~----~~~~~l~~~~~p~~i~~v~~~p~t~~ 487 (504)
T PRK07514 414 EVEGEID-ELPGVVESAVIGVPHPDFG-EGVTAVVVPKPGAALDEAAILA----ALKGRLARFKQPKRVFFVDELPRNTM 487 (504)
T ss_pred HHHHHHH-hCCCeeEEEEEeCCCCCcC-ceEEEEEEECCCCCCCHHHHHH----HHHhhcccCCCCcEEEEeccCCCCCC
Confidence 9999996 8999999999999887777 8889999987765555555544 45567899999999999999999999
Q ss_pred cHHHHHHHHHHHHhhh
Q 010854 478 NKLLRRVLRDQIKHEL 493 (499)
Q Consensus 478 GKv~r~~l~~~~~~~~ 493 (499)
||++|++|++.+++.+
T Consensus 488 gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 488 GKVQKNLLREQYADLF 503 (504)
T ss_pred cceeHHHHHHHHHhhc
Confidence 9999999999887653
No 65
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.9e-57 Score=474.91 Aligned_cols=471 Identities=17% Similarity=0.137 Sum_probs=343.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|+++|++++|||+++|++++|+++.++++++.++|++++++++|++.... ..+.......+.
T Consensus 128 ~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~ 201 (696)
T PLN02387 128 HNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLET 201 (696)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCC
Confidence 68999999999999999999999999999999999999999999999999999999987532 222222222222
Q ss_pred ceEEecccCCCCC------CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 82 KAIVLPAIGNDVG------IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 82 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
...++..+..... ........++.++...+...+ .......++|+++|+|||||||.||||++||+++..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~ 277 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENP----VDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVA 277 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCC----CCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHH
Confidence 2223322211100 001112345677665443211 112234679999999999999999999999999988
Q ss_pred Hhhhcceec-cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCC-------hhHHHHHHHHhCCeEEecchHH
Q 010854 156 CTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-------~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
.+......+ .+.++|++++++|++|.+++...+.++..|+++.+...... ...++..+++++||++.++|.+
T Consensus 278 ~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~ 357 (696)
T PLN02387 278 TVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAI 357 (696)
T ss_pred HHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHH
Confidence 877665443 57889999999999999998765556677777665432111 1345678999999999999999
Q ss_pred HHHHHccCCCC-------------------------------c---------------ccc-cceeEEEeecCCCChhhH
Q 010854 228 VKAWRNTNCLE-------------------------------G---------------LDW-TKIRSFASTGETSNVDDD 260 (499)
Q Consensus 228 l~~l~~~~~~~-------------------------------~---------------~~l-~~l~~i~~~G~~l~~~~~ 260 (499)
++.+.+..... . ..+ +++|.+++||+++++++.
T Consensus 358 l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~ 437 (696)
T PLN02387 358 LDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQ 437 (696)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHH
Confidence 99886531100 0 001 589999999999999998
Q ss_pred HHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCC---CCCCCcceeeEe-ccccc
Q 010854 261 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY---PDDQPCVGEVGL-FPLYL 335 (499)
Q Consensus 261 ~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~---~~g~~~~Gei~v-~~~~~ 335 (499)
+++...+ ++.+++.||+||+++..+.... .....+++|.|+|+++++|+| +++... .++. .|||+| ++..+
T Consensus 438 ~~~~~~~-g~~v~~~YG~TEt~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~ 513 (696)
T PLN02387 438 RFINICL-GAPIGQGYGLTETCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVT 513 (696)
T ss_pred HHHHHHc-CCCeeEeechhhcccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCccc
Confidence 8777655 7899999999999865554433 233568999999999999998 444322 1222 499999 66655
Q ss_pred ccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeee
Q 010854 336 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETA 414 (499)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~ 414 (499)
.+ ++.+++.+...|... .+|.+||+|||+|++|++|+|++.||.||+||. +|++|+|.+||++|. .||.|.+++
T Consensus 514 ~G--Y~~~pe~T~~~f~~d--~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~-~~p~V~~~~ 588 (696)
T PLN02387 514 LG--YFKNQEKTDEVYKVD--ERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS-VSPYVDNIM 588 (696)
T ss_pred ch--hcCCHHHHhhhhccc--cCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh-cCCCeeEEE
Confidence 53 444555555554211 124469999999999999999999999999997 699999999999996 899999999
Q ss_pred EEEeCCCCCCceEEEEEEEecCCC----------C-CC------HHHHHHHHHHHH-----HhhcCCceeeeEEEEcCCC
Q 010854 415 AISVSPAGGGPEVLVIFVVLKKGF----------T-SQ------PDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPEF 472 (499)
Q Consensus 415 v~~~~~~~~~~~~~~~~v~~~~~~----------~-~~------~~~l~~~~~~~~-----~~~l~~~~~p~~~~~~~~i 472 (499)
|++.+. . ..++|+|++.... . .+ ..++.+.+.+.+ +.+|..|++|++|.++++-
T Consensus 589 V~g~~~---~-~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~ 664 (696)
T PLN02387 589 VHADPF---H-SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEP 664 (696)
T ss_pred EEecCC---c-ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCC
Confidence 998652 2 6678888876421 0 01 122233333323 3479999999999998753
Q ss_pred C------CCCCcHHHHHHHHHHHHhhhhh
Q 010854 473 P------RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 473 P------~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
. +|++.|+.|+.+++.|++++++
T Consensus 665 ~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ 693 (696)
T PLN02387 665 WTPESGLVTAALKLKREQIRKKFKDDLKK 693 (696)
T ss_pred CCCCCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 2 5888999999999999999875
No 66
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-56 Score=460.33 Aligned_cols=459 Identities=20% Similarity=0.229 Sum_probs=351.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+++++..... ..........
T Consensus 72 i~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~ 145 (562)
T PRK12492 72 LVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGI 145 (562)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCc
Confidence 6899999999999999999999999999999999999999999999999999999997643210 1111000000
Q ss_pred ceEEecc-------------cC--C----CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010854 82 KAIVLPA-------------IG--N----DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGE 142 (499)
Q Consensus 82 ~~~~~~~-------------~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 142 (499)
....... .. . ............|+++...... ....+.....+++++++|||||||.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~ 221 (562)
T PRK12492 146 EYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGL 221 (562)
T ss_pred eEEEeechhhccccccchhcccccccccccccccCCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCC
Confidence 0000000 00 0 0000001123455555443221 1112234567899999999999999
Q ss_pred CceEEecchhhHHHhhhcceecc---------CcCC-cEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHH
Q 010854 143 PKAIPWTQLSSIRCTAEGWAHID---------LKVG-DVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGK 211 (499)
Q Consensus 143 pk~v~~s~~~~~~~~~~~~~~~~---------~~~~-~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~ 211 (499)
||+|.++|+++...+......+. +..+ ++++..+|++|.+++.. ++..+..|+.+++.....++..+++
T Consensus 222 PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (562)
T PRK12492 222 AKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIK 301 (562)
T ss_pred CceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHH
Confidence 99999999998766554433221 2333 56788999999999865 7777888988877765567789999
Q ss_pred HHHHhCCeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC
Q 010854 212 FVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL 291 (499)
Q Consensus 212 ~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~ 291 (499)
.++++++|++.++|+++..+.+.......+++++|.++++|+++++.+.+.+...+ ++++++.||+||++..+..+...
T Consensus 302 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~ 380 (562)
T PRK12492 302 ELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYG 380 (562)
T ss_pred HHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCc
Confidence 99999999999999999999887766667788999999999999999988887655 78999999999998766554443
Q ss_pred CCCccccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeE
Q 010854 292 QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIK 370 (499)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~ 370 (499)
.....+++|.|+++++++|+|+++.+++.|+ .|||+| ++..+.+ ++.+++.+...+ +.++||+|||+|+
T Consensus 381 ~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~------~~~g~~~TGD~g~ 450 (562)
T PRK12492 381 ELARLGTVGIPVPGTALKVIDDDGNELPLGE--RGELCIKGPQVMKG--YWQQPEATAEAL------DAEGWFKTGDIAV 450 (562)
T ss_pred ccccCCccceecCCCEEEEECCCCCCCCCCC--ceEEEEeCCccccc--cccCchhhhhcc------cCCCceecCcEEE
Confidence 3345578999999999999999999999998 599999 5443332 222333322222 2457999999999
Q ss_pred eecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHH
Q 010854 371 RTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFS 450 (499)
Q Consensus 371 ~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 450 (499)
++++|++++.||.+|+++++|++|+|.+||+++. .||.|.++++++.++...+ +.++++++..+. ..+.+++.
T Consensus 451 ~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~-~~~~~~i~---- 523 (562)
T PRK12492 451 IDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARDP-GLSVEELK---- 523 (562)
T ss_pred ECCCCeEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC-CCCHHHHH----
Confidence 9999999999999999999999999999999997 8999999999999887777 888888876543 23444444
Q ss_pred HHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHH
Q 010854 451 KAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 488 (499)
Q Consensus 451 ~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~ 488 (499)
+.+.++|+.|+.|.++.++++||+|++||++|++|++.
T Consensus 524 ~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 524 AYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred HHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 44667889999999999999999999999999999875
No 67
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-56 Score=458.15 Aligned_cols=459 Identities=19% Similarity=0.232 Sum_probs=359.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++.++++..+. +.+.+..+..+.
T Consensus 61 ~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~ 134 (542)
T PRK06018 61 IKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPS 134 (542)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCC
Confidence 68999999999999999999999999999999999999999999999999999999987532 222222222221
Q ss_pred -ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH-HH-hh
Q 010854 82 -KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RC-TA 158 (499)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~-~~-~~ 158 (499)
..++.............+....+.++...... .........+++++++|||||||.||+|.++|+++. .. ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~ 209 (542)
T PRK06018 135 VERYVVLTDAAHMPQTTLKNAVAYEEWIAEADG-----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMA 209 (542)
T ss_pred ccEEEEecccccccccCccccccHHHHhccCCc-----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHH
Confidence 11211111111111112234466666554321 112234566889999999999999999999998743 22 23
Q ss_pred hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
.....++++.+|+++...|++|.+++...+.++..|+++++.....+++.+++.++++++|++.++|+++..|.+.....
T Consensus 210 ~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~ 289 (542)
T PRK06018 210 NNGDALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE 289 (542)
T ss_pred hhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhccccc
Confidence 33445678899999999999999988777788899999988765667889999999999999999999999998876666
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCC----------CccccccccCCCceE
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP----------QAFGAFSTATMTAGL 308 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~ 308 (499)
..+++++|.++++|+++++++.+++++ .+..+++.||+||++.++..+..... ....++|+|.+++++
T Consensus 290 ~~~~~~lr~~~~~G~~l~~~~~~~~~~--~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i 367 (542)
T PRK06018 290 GLKLPHLKMVVCGGSAMPRSMIKAFED--MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEM 367 (542)
T ss_pred CCCcccceEEEEcCCCCCHHHHHHHHH--hCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEE
Confidence 667889999999999999999999987 48899999999999876543321110 123578999999999
Q ss_pred EEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcC-CCCCCCccccccCceeEeecCceEEEecccCCe
Q 010854 309 VILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRG-MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDT 386 (499)
Q Consensus 309 ~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~ 386 (499)
+|+|+++++++.+....||+++ ++..+.+ |++. ....+.++||+|||+++++++|++++.||.+|+
T Consensus 368 ~v~d~~~~~~~~~~~~~Gel~i~g~~~~~g------------y~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~ 435 (542)
T PRK06018 368 KITDDAGKELPWDGKTFGRLKVRGPAVAAA------------YYRVDGEILDDDGFFDTGDVATIDAYGYMRITDRSKDV 435 (542)
T ss_pred EEECCCCCCCCCCCCceeEEEEecCCcchh------------hhcCcccEecCCcEEEcCCEEEEcCCccEEEEecCCCe
Confidence 9999999988764222699999 5444332 1110 111245689999999999999999999999999
Q ss_pred eeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEE
Q 010854 387 MNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLV 466 (499)
Q Consensus 387 i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~ 466 (499)
++++|.+|+|.+||+++. .+|+|.+++|++.+++..+ +.+.++|++.++...+.+++.+. +..+++.|+.|..+
T Consensus 436 i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~P~~i 509 (542)
T PRK06018 436 IKSGGEWISSIDLENLAV-GHPKVAEAAVIGVYHPKWD-ERPLLIVQLKPGETATREEILKY----MDGKIAKWWMPDDV 509 (542)
T ss_pred EEECCEEECHHHHHHHHH-hCCcceeEEEEeccCCCcC-ceeEEEEEeCCCCCCCHHHHHHH----HHhhCccccCCcEE
Confidence 999999999999999996 8999999999999998777 88888988887766565555555 55688999999999
Q ss_pred EEcCCCCCCCCcHHHHHHHHHHHHh
Q 010854 467 KVVPEFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 467 ~~~~~iP~t~~GKv~r~~l~~~~~~ 491 (499)
+++++||+|++||++|++|++.|.+
T Consensus 510 ~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 510 AFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred EEeccCCCCCcchhhHHHHHHHHhc
Confidence 9999999999999999999999876
No 68
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-57 Score=467.17 Aligned_cols=464 Identities=18% Similarity=0.145 Sum_probs=345.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.+++++++++.+|+++... ..+.........
T Consensus 84 ~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~ 157 (600)
T PRK08279 84 VGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLAR 157 (600)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcc
Confidence 67999999999999999999999999999999999999999999999999999999987532 122222222111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++....... .....+.++.......+............+++++++|||||||.||+|+++|+++...+....
T Consensus 158 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~ 232 (600)
T PRK08279 158 PPRLWVAGGDTL-----DDPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFG 232 (600)
T ss_pred cceEEEecCccc-----cccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHH
Confidence 111221111110 012334444432222111111222335678999999999999999999999999999988887
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++++|+++..+|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++.++|++++.++........
T Consensus 233 ~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~ 311 (600)
T PRK08279 233 GLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTD 311 (600)
T ss_pred HhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccc
Confidence 7789999999999999999999886 666777788777765 56788899999999999999999999999887554444
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCC----CceE--------
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATM----TAGL-------- 308 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~----~~~~-------- 308 (499)
...+++.+ +|+.+++++.+.+...++...+++.||+||++..+... ....+++|.+.+ +..+
T Consensus 312 ~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 385 (600)
T PRK08279 312 RDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV----FNFDGTVGRVPLWLAHPYAIVKYDVDTG 385 (600)
T ss_pred cCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc----CCCCcccccccccccccceeeeeccCcC
Confidence 45677764 47779999999998887656799999999988643321 123456666555 3322
Q ss_pred -EEECCCC--CCCCCCCCcceeeEe---cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecc
Q 010854 309 -VILDECG--VPYPDDQPCVGEVGL---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGR 382 (499)
Q Consensus 309 -~i~d~~g--~~~~~g~~~~Gei~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR 382 (499)
.+.+.++ .+++.|+ .||+++ ++..+.+ +.++..+...+.......+++||+|||+|+++++|++++.||
T Consensus 386 ~~i~~~~~~~~~~~~g~--~Gel~~~i~~~~~~~G---Y~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR 460 (600)
T PRK08279 386 EPVRDADGRCIKVKPGE--VGLLIGRITDRGPFDG---YTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDR 460 (600)
T ss_pred ceeeCCCCccccCCCCC--ceeEEEEecCcccccc---cCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecc
Confidence 2333222 3567777 599984 3444332 234444444333223345678999999999999999999999
Q ss_pred cCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCcee
Q 010854 383 ADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFK 462 (499)
Q Consensus 383 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 462 (499)
.||+||++|++|+|.|||+++. .+|+|.+++|++++++..+....+++++..++...+.+++.++ ++++|+.|+.
T Consensus 461 ~~d~ik~~G~~i~p~eIE~~l~-~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~----l~~~L~~~~~ 535 (600)
T PRK08279 461 LGDTFRWKGENVATTEVENALS-GFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAH----LYERLPAYAV 535 (600)
T ss_pred cCCeEEECCcccCHHHHHHHHh-cCCCcceEEEEEeecCCCCCccceeEEEecCCccCCHHHHHHH----HHhhCccccC
Confidence 9999999999999999999997 8999999999999876533245566666654444555555555 5568999999
Q ss_pred eeEEEEcCCCCCCCCcHHHHHHHHHHHHhhh
Q 010854 463 VSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 493 (499)
Q Consensus 463 p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~ 493 (499)
|..++++++||+|.+||++|+.|++++.++-
T Consensus 536 P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 566 (600)
T PRK08279 536 PLFVRLVPELETTGTFKYRKVDLRKEGFDPS 566 (600)
T ss_pred CeEEEeecCCCCCcchhhhHHHHhhcCCCcc
Confidence 9999999999999999999999999887763
No 69
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.4e-57 Score=503.57 Aligned_cols=467 Identities=18% Similarity=0.171 Sum_probs=363.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+++++.+++++++++.+++++...+......... .....
T Consensus 662 ~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~ 738 (1146)
T PRK08633 662 LKDEENVGILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDL---ELPEN 738 (1146)
T ss_pred CCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCch---hcccC
Confidence 579999999999999999999999999999999999999999999999999999999876432211000000 00011
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCC--CCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP--NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
..++...+... . ......+.+....... +.. .........++|+++++|||||||.||+|.++|+++...+..
T Consensus 739 ~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~ 813 (1146)
T PRK08633 739 VKVIYLEDLKA-K---ISKVDKLTALLAARLL-PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQ 813 (1146)
T ss_pred ceEEEeehhcc-c---cchhHHHHHHHHhccC-CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHH
Confidence 11111111000 0 0011112222111100 000 000013456799999999999999999999999999988887
Q ss_pred cceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
....++.+++|+++..+|++|.+++.. ++.+++.|+++++.+...+++.+++.++++++|++.++|++++.+.+.....
T Consensus 814 ~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 893 (1146)
T PRK08633 814 ISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLH 893 (1146)
T ss_pred HHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccC
Confidence 777788899999999999999999876 8899999999999876678899999999999999999999999998876666
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC---------CCccccccccCCCceEE
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ---------PQAFGAFSTATMTAGLV 309 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~ 309 (499)
+.+++++|.+++||+++++++.+.+++.+ +.++++.||+||++.......... ....+++|+|+|+++++
T Consensus 894 ~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 972 (1146)
T PRK08633 894 PLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVR 972 (1146)
T ss_pred cccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEE
Confidence 67789999999999999999999998776 789999999999986554332211 12457899999999999
Q ss_pred EEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCee
Q 010854 310 ILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM 387 (499)
Q Consensus 310 i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i 387 (499)
|+| +++++++.|+ .||+++ ++..+.+ ++.+++.+...+.+ .++++||+|||++++|+||++++.||.||++
T Consensus 973 i~d~~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~~~---~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i 1045 (1146)
T PRK08633 973 IVDPETFEELPPGE--DGLILIGGPQVMKG--YLGDPEKTAEVIKD---IDGIGWYVTGDKGHLDEDGFLTITDRYSRFA 1045 (1146)
T ss_pred EEcCCCCccCCCCC--ceEEEEcCCCcccc--ccCCccchHHHhhc---CCCCCeEECCCEEEEcCCceEEEEecccchh
Confidence 999 6799999999 499999 5544433 33344444444432 2456899999999999999999999999999
Q ss_pred eeCceeechHHHHHHHhhcCc--cceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeE
Q 010854 388 NLGGIKTSSVEIERVCDQADE--SILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSL 465 (499)
Q Consensus 388 ~~~G~~v~~~~iE~~l~~~~~--~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 465 (499)
|++|++|+|.|||+++. +|| .+.+++|++++++..+ +.++++++.. ..+.+++.+++++ ..++.|+.|..
T Consensus 1046 ~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v~~~~~~~~g-~~~~~~v~~~---~~~~~~l~~~~~~---~~l~~~~~P~~ 1117 (1146)
T PRK08633 1046 KIGGEMVPLGAVEEELA-KALGGEEVVFAVTAVPDEKKG-EKLVVLHTCG---AEDVEELKRAIKE---SGLPNLWKPSR 1117 (1146)
T ss_pred hhCcEEECHHHHHHHHH-hccCCCCceEEEEeccCCCCC-cEEEEEEecC---ccCHHHHHHHHHh---cCCCcccCCcE
Confidence 99999999999999997 888 4667999999998888 8888888762 2345555555432 46999999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 466 VKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 466 ~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+++++++|+|++||++|++|++.+++.
T Consensus 1118 i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1118 YFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred EEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 999999999999999999999886654
No 70
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5e-57 Score=461.50 Aligned_cols=435 Identities=18% Similarity=0.137 Sum_probs=325.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC--------CCHHHHHHHhhcCCeeEEEecccccccCccccchhh
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSK 74 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 74 (499)
++||+|+++++|++++++++|||+++|++++ +++. ...+++.+++++++++++|++..... .+..
T Consensus 52 ~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~------~~~~ 124 (525)
T PRK05851 52 DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLE------RLRA 124 (525)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHH------HHHH
Confidence 6899999999999999999999999999865 4432 22355567789999999999874321 1100
Q ss_pred hhhcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 75 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
. .. . +.+. .+........ .... ....++++++++|||||||.||||+++|.++.
T Consensus 125 ~---~~-~-~~~~---------------~~~~~~~~~~----~~~~--~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~ 178 (525)
T PRK05851 125 V---DS-S-VTVH---------------DLATAAHTNR----SASL--TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVL 178 (525)
T ss_pred h---hc-c-cccc---------------cccccccccc----cccC--CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHH
Confidence 0 00 0 0000 0000000000 0000 12357899999999999999999999999999
Q ss_pred HHhhhcceeccCc-CCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CC--ChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 155 RCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SP--LERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 155 ~~~~~~~~~~~~~-~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~--~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
..+......+++. ++|+++.++|++|.+++..++.+++.|+++++.+. .+ ++..+++.++++++|++...|.++..
T Consensus 179 ~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~ 258 (525)
T PRK05851 179 SNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNL 258 (525)
T ss_pred HHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHH
Confidence 9888777778888 89999999999999999888899999999998763 12 46789999999999988665555555
Q ss_pred HHccCC-CCcccccceeEEEeecCCCChhhHHHHHhhc-----ccCceeccccccceeeeeecCCCC-------------
Q 010854 231 WRNTNC-LEGLDWTKIRSFASTGETSNVDDDLWLSSKA-----WYNAIIESCGGTELSSAYIQGSLL------------- 291 (499)
Q Consensus 231 l~~~~~-~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~-----~~~~i~~~yg~tE~~~~~~~~~~~------------- 291 (499)
+.+... ....+++++|.++++|+++++++.+++...+ +...+++.||+||++..+......
T Consensus 259 l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 338 (525)
T PRK05851 259 IGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDG 338 (525)
T ss_pred HHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccC
Confidence 443322 2345678999999999999999888877542 123599999999997655432211
Q ss_pred -CCCccccccccCCCceEEEECCCC-CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCce
Q 010854 292 -QPQAFGAFSTATMTAGLVILDECG-VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDI 368 (499)
Q Consensus 292 -~~~~~~~~g~~~~~~~~~i~d~~g-~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~ 368 (499)
.....+++|+|+|+++++|+|+++ .+++.|+ .|||++ ++..+.+ |+++ +..+.++||+|||+
T Consensus 339 ~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~--~GEl~v~g~~~~~G------------Y~~~-~~~~~~~~~~TGDl 403 (525)
T PRK05851 339 SGARRHAVLGNPIPGMEVRISPGDGAAGVAGRE--IGEIEIRGASMMSG------------YLGQ-APIDPDDWFPTGDL 403 (525)
T ss_pred cccceeeeecCCCCCcEEEEECCCCCccCCCCC--eEEEEEecCchhhc------------cccC-CccCCCCceeccce
Confidence 112346899999999999999665 4688888 599999 5544432 3332 22334679999999
Q ss_pred eEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHH
Q 010854 369 IKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMI 448 (499)
Q Consensus 369 ~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 448 (499)
|+++ +|+|+++||.||+||++|++|+|.+||++|. .||+|.+++|++++++..+ +.+.++|+.... ..+.+++.++
T Consensus 404 ~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~~~-~~~~~~~~~~ 479 (525)
T PRK05851 404 GYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAEFR-GPDEAGARSE 479 (525)
T ss_pred EEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEEec-CcchHHHHHH
Confidence 9997 7999999999999999999999999999996 8999999999999887776 666766665421 2345566677
Q ss_pred HHHHHHhhcCCceeeeEEEEcC--CCCCCCCcHHHHHHHHHHHHh
Q 010854 449 FSKAIQSKLNPLFKVSLVKVVP--EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 449 ~~~~~~~~l~~~~~p~~~~~~~--~iP~t~~GKv~r~~l~~~~~~ 491 (499)
+++++...+ ++.|..+++++ +||+|++||++|+.|++.+++
T Consensus 480 ~~~~l~~~l--~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 480 VVQRVASEC--GVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred HHHHHHHHh--CCCccEEEEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 766665544 27889999998 899999999999999998865
No 71
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.4e-56 Score=455.93 Aligned_cols=460 Identities=18% Similarity=0.206 Sum_probs=357.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++++.+.....++..+++.++++.+++++.... .........+....+.
T Consensus 70 ~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~ 148 (536)
T PRK10946 70 IKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSS 148 (536)
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCC
Confidence 689999999999999999999999999998887777777888999999999999999764210 0000001111111222
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++... . .+...+.+++..... ........++++++++|||||||.||+|+++|+++...+....
T Consensus 149 ~~~~~~~~-~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~ 215 (536)
T PRK10946 149 LRVVLLLN-D-------DGEHSLDDAINHPAE-----DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV 215 (536)
T ss_pred ceEEEEec-C-------CCCccHHHHhhCccc-----ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 22222111 1 123344454433221 1112334678999999999999999999999999999888877
Q ss_pred eeccCcCCcEEEeecCccccchhh--hhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccC--CC
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN--CL 237 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~--~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~--~~ 237 (499)
..++++.+|++++.+|++|.+++. .++.++..|+++++.+ ..++..+++.++++++|++.++|+++..|++.. ..
T Consensus 216 ~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 294 (536)
T PRK10946 216 EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGG 294 (536)
T ss_pred HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccC
Confidence 778899999999999999998875 3788899999998875 457788999999999999999999999998763 22
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccC-CCceEEEECCCCC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGV 316 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~g~ 316 (499)
....+++++.++++|+.+++.+.+.+...+ ++++++.||+||+...+............++|.|+ |++.++|+|++|+
T Consensus 295 ~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~ 373 (536)
T PRK10946 295 SRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGN 373 (536)
T ss_pred ccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCC
Confidence 334568999999999999999999887666 78999999999976443322222233457899998 7999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeec
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 395 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~ 395 (499)
+++.|+ +||+++ ++..+.+ ++.+++.+...+ +.++||+|||+|++|++|++++.||.+|+++++|++|+
T Consensus 374 ~~~~g~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~------~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~ 443 (536)
T PRK10946 374 PLPQGE--VGRLMTRGPYTFRG--YYKSPQHNASAF------DANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIA 443 (536)
T ss_pred CCCCCC--ccEEEEecCccchh--hcCCcccchhhc------ccCCceecCceEEECCCCcEEEeccccceeecCCEEEc
Confidence 999999 599999 5554433 222222222222 34679999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t 475 (499)
|.+||++|. .+++|.++++++.++...+ +.+++++++.++ .+.+++.+.+++ ..++.|+.|..+.+++++|+|
T Consensus 444 ~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~vv~~~~--~~~~~l~~~~~~---~~l~~~~~P~~~~~~~~iP~t 516 (536)
T PRK10946 444 AEEIENLLL-RHPAVIHAALVSMEDELMG-EKSCAFLVVKEP--LKAVQLRRFLRE---QGIAEFKLPDRVECVDSLPLT 516 (536)
T ss_pred HHHHHHHHH-hCCCcceEEEEcCCCcccC-ceEEEEEEeCCC--CCHHHHHHHHHh---CCccccccCcEEEEeccCCCC
Confidence 999999996 8999999999999988777 888999987754 455555555432 249999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhhhh
Q 010854 476 ASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~~~~ 494 (499)
++||++|++|++++++...
T Consensus 517 ~~GKv~r~~L~~~~~~~~~ 535 (536)
T PRK10946 517 AVGKVDKKQLRQWLASRAS 535 (536)
T ss_pred CCCcccHHHHHHHHHhhcc
Confidence 9999999999999877653
No 72
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-56 Score=451.46 Aligned_cols=425 Identities=21% Similarity=0.200 Sum_probs=341.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
++++|+|+++++|++++++++|||+++|++++|+++..+.+++..++++++++.++++.... .. ..+.
T Consensus 42 L~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~-----~~-------~~~~ 109 (471)
T PRK07787 42 VAGARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDD-----PA-------GLPH 109 (471)
T ss_pred hccCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCcc-----cc-------cccc
Confidence 46799999999999999999999999999999999999999999999999999999976310 00 0000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.. ....+ . ......++++++++|||||||.||+|.++|+++...+....
T Consensus 110 ~~~~~-------------~~~~~-------~--------~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~ 161 (471)
T PRK07787 110 VPVRL-------------HARSW-------H--------RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALA 161 (471)
T ss_pred eeeec-------------ccccc-------c--------cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHH
Confidence 00000 00000 0 00113568999999999999999999999999998887777
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++.+++++..+|++|.++++. ++.+++.|+++++.+ ..++..+++.++ +++|++.++|+++..|.+.... ..
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~ 238 (471)
T PRK07787 162 EAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-AR 238 (471)
T ss_pred HhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cc
Confidence 7788899999999999999999886 899999999999886 467889999999 9999999999999999875322 34
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
.++++|.+++||+++++++.+++...+ +..+++.||+||++...... .......+++|+|+++++++|+|+++.+++.
T Consensus 239 ~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~ 316 (471)
T PRK07787 239 ALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR-ADGERRPGWVGLPLAGVETRLVDEDGGPVPH 316 (471)
T ss_pred cccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC-CCCcccCCcccccCCCcEEEEECCCCCCCCC
Confidence 578899999999999999999888766 67899999999998644333 2233456789999999999999988988873
Q ss_pred -CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEeccc-CCeeeeCceeechH
Q 010854 321 -DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA-DDTMNLGGIKTSSV 397 (499)
Q Consensus 321 -g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~-~d~i~~~G~~v~~~ 397 (499)
++ .+|||++ ++..+.+ ++.+++.+...+ ..++||+|||+|+++++|++++.||. +|+++++|.+|+|.
T Consensus 317 ~~~-~~Gei~v~g~~~~~g--y~~~~~~t~~~~------~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~ 387 (471)
T PRK07787 317 DGE-TVGELQVRGPTLFDG--YLNRPDATAAAF------TADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAG 387 (471)
T ss_pred CCC-CceEEEEECcccchh--hcCChhhchhcc------cCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHH
Confidence 43 1599999 5443332 222333222222 23579999999999999999999996 89999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
+||++|. .++.|.+++|++.++...+ +.++++++... ..+.+++.+ ++++.|++|+.|..++++++||+|.+
T Consensus 388 eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~--~~~~~~l~~----~l~~~l~~~~~P~~i~~~~~iP~~~~ 459 (471)
T PRK07787 388 EIETALL-GHPGVREAAVVGVPDDDLG-QRIVAYVVGAD--DVAADELID----FVAQQLSVHKRPREVRFVDALPRNAM 459 (471)
T ss_pred HHHHHHH-hCCCcceEEEEcccccccC-eEEEEEEEeCC--CCCHHHHHH----HHHhhcccccCCcEEEEeccCCCCCC
Confidence 9999997 8999999999999887777 89999998732 334444444 46678899999999999999999999
Q ss_pred cHHHHHHHHHH
Q 010854 478 NKLLRRVLRDQ 488 (499)
Q Consensus 478 GKv~r~~l~~~ 488 (499)
||++|+.|+++
T Consensus 460 GKi~r~~L~~~ 470 (471)
T PRK07787 460 GKVLKKQLLSE 470 (471)
T ss_pred ccccHHHhccC
Confidence 99999999753
No 73
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-56 Score=456.01 Aligned_cols=453 Identities=18% Similarity=0.168 Sum_probs=355.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++.+++++... .............
T Consensus 59 v~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 133 (524)
T PRK06188 59 LGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPS 133 (524)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCC
Confidence 68999999999999999999999999999999999999999999999999999999987410 0111111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++...... . ..++...... ...........++++++++|||||||.||+|.++|.++...+....
T Consensus 134 ~~~~~~~~~~~-------~---~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~ 201 (524)
T PRK06188 134 LKHVLTLGPVP-------D---GVDLLAAAAK--FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQL 201 (524)
T ss_pred ceEEEEeCCcc-------c---hhhHHHhhhc--cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHH
Confidence 11122111100 0 1111111110 0001111123356799999999999999999999999999888888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..+++..+++++..+|++|.+++. ++.+++.|+++++.+ ..++..+++.++++++|++.++|+++..+++.......+
T Consensus 202 ~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~ 279 (524)
T PRK06188 202 AEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD 279 (524)
T ss_pred hhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC
Confidence 888899999999999999988864 677899999999987 467899999999999999999999999999887766778
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC-----CCCccccccccCCCceEEEECCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
++++|.+++||+.++++....+.+.+ +..+++.||+||++..+...... ......++|+|+|++.++|+|++++
T Consensus 280 l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~ 358 (524)
T PRK06188 280 LSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGR 358 (524)
T ss_pred CcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCC
Confidence 89999999999999999877777665 67799999999997555433221 1235578999999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeec
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 395 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~ 395 (499)
+++.|+ .||+++ ++..+.+ ++.++..+...+ .++||+|||+++++++|++++.||.+|+++++|.+|+
T Consensus 359 ~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~ 427 (524)
T PRK06188 359 EVAQGE--VGEICVRGPLVMDG--YWNRPEETAEAF-------RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVF 427 (524)
T ss_pred CCCCCC--eeEEEEECcchhhh--hcCChHHhhhhh-------cCCceeecceEEEcCCccEEEEeccccceecCCEEEC
Confidence 999998 499999 4433322 111222111111 2479999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT 475 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t 475 (499)
|.+||++|. .+++|.+++|++.+++..+ +.+++++++.++...+.+++.+ ++.+.++.++.|.+++++++||+|
T Consensus 428 ~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~p~~i~~v~~~P~t 501 (524)
T PRK06188 428 PREVEDVLA-EHPAVAQVAVIGVPDEKWG-EAVTAVVVLRPGAAVDAAELQA----HVKERKGSVHAPKQVDFVDSLPLT 501 (524)
T ss_pred HHHHHHHHH-hCCCeeEEEEEeccCCCcC-ceEEEEEEECCCCCCCHHHHHH----HHHHhcccCCCCcEEEEecCCCCC
Confidence 999999996 8999999999999888777 8899999988765555555554 456688999999999999999999
Q ss_pred CCcHHHHHHHHHHHHh
Q 010854 476 ASNKLLRRVLRDQIKH 491 (499)
Q Consensus 476 ~~GKv~r~~l~~~~~~ 491 (499)
++||++|++|++.|.+
T Consensus 502 ~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 502 ALGKPDKKALRARYWE 517 (524)
T ss_pred ccccccHHHHHHHHHh
Confidence 9999999999998844
No 74
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.4e-56 Score=454.92 Aligned_cols=452 Identities=18% Similarity=0.221 Sum_probs=352.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC--
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-- 79 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.++++.+++++... +.+.++....
T Consensus 59 ~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~ 132 (517)
T PRK08008 59 IRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDAT 132 (517)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccc
Confidence 68999999999999999999999999999999999999999999999999999999987532 2233332221
Q ss_pred CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 80 PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
....+..... .. ....+..+++++...... .........++++++++|||||||.||+|+++|.++......
T Consensus 133 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~ 204 (517)
T PRK08008 133 PLRHICLTRV-AL---PADDGVSSFTQLKAQQPA----TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYY 204 (517)
T ss_pred cCcEEEEecC-CC---cccccccCHHHHhccCCc----cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHH
Confidence 1112222111 11 112234555555443221 001122345689999999999999999999999999866544
Q ss_pred cceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
......++.++++++.+|++|..+... ++.++..|+++++.+ .+++..+++.++++++|++.++|++++.++......
T Consensus 205 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 283 (517)
T PRK08008 205 SAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA 283 (517)
T ss_pred HhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc
Confidence 444446788999999999999877665 888999999999986 567889999999999999999999999998765444
Q ss_pred cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCC
Q 010854 239 GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
....+.++.+..++ .++++....+...+ +.++++.||+||++..+............++|.|+++++++|+|++++++
T Consensus 284 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~ 361 (517)
T PRK08008 284 NDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPL 361 (517)
T ss_pred ccccccceeeEEec-CCCHHHHHHHHHHh-CCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCC
Confidence 34456778777654 67777777777655 78999999999998655544444444567899999999999999999999
Q ss_pred CCCCCcceeeEecc----cccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 319 PDDQPCVGEVGLFP----LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 319 ~~g~~~~Gei~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
+.|+ .|||++.. ..+.+ ++.+++.+...+ +.++||+|||++++|++|++++.||.+|+||++|++|
T Consensus 362 ~~g~--~Gel~v~g~~~~~~~~g--y~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i 431 (517)
T PRK08008 362 PAGE--IGEICIKGVPGKTIFKE--YYLDPKATAKVL------EADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENV 431 (517)
T ss_pred CCCC--cceEEEeCCCCcchhhh--HhCChHHHhhcc------cCCCCeeccceEEECCCCcEEEeecccceEEeCCEEE
Confidence 9998 59999942 22221 222333322222 2457999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.+||+++. .+++|.+++|++.+++..+ +++.++|+++.+...+.+++.++ +.+++++|+.|..++++++||+
T Consensus 432 ~p~~iE~~l~-~~~~v~~~~v~g~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~P~~~~~v~~iP~ 505 (517)
T PRK08008 432 SCVELENIIA-THPKIQDIVVVGIKDSIRD-EAIKAFVVLNEGETLSEEEFFAF----CEQNMAKFKVPSYLEIRKDLPR 505 (517)
T ss_pred CHHHHHHHHH-hCCceeeEEEEccCCCCCC-ceEEEEEEECCCCCCCHHHHHHH----HHhhcccccCCcEEEEeccCCC
Confidence 9999999996 8999999999999988777 88999999887655555555555 5568899999999999999999
Q ss_pred CCCcHHHHHHHH
Q 010854 475 TASNKLLRRVLR 486 (499)
Q Consensus 475 t~~GKv~r~~l~ 486 (499)
|++||++|+.|+
T Consensus 506 t~~gK~~r~~l~ 517 (517)
T PRK08008 506 NCSGKIIKKNLK 517 (517)
T ss_pred CCccceehhhcC
Confidence 999999999874
No 75
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.1e-56 Score=505.79 Aligned_cols=444 Identities=21% Similarity=0.242 Sum_probs=357.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++++++++++++|||+++|++++|++|..+.+.+.+++++++++.+|++........ . ...
T Consensus 505 ~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~------~----~~~ 574 (1296)
T PRK10252 505 VKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFA------D----VPD 574 (1296)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcc------c----CCC
Confidence 689999999999999999999999999999999999999999999999999999999875321110 0 000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.. +. .+....... .........++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 575 ~~-~~----------------~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~ 631 (1296)
T PRK10252 575 LT-SL----------------CYNAPLAPQ------GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ 631 (1296)
T ss_pred ce-ee----------------ecccccccc------cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH
Confidence 00 00 000000000 00011123578999999999999999999999999999999888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC--CChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..++++++|+++...|++|..++..++.+++.|+++++.+.. .++..+.+.++++++|++.++|+++..+++......
T Consensus 632 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~ 711 (1296)
T PRK10252 632 NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEG 711 (1296)
T ss_pred HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccc
Confidence 889999999999999999999988899999999999998643 367889999999999999999999999887643322
Q ss_pred --ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC------CCccccccccCCCceEEEE
Q 010854 240 --LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVIL 311 (499)
Q Consensus 240 --~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~i~ 311 (499)
..++++|.+++|||.+++++.+.+...+ ++++++.||+||++..++...... .....++|.|++++.++|+
T Consensus 712 ~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 790 (1296)
T PRK10252 712 ARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRIL 790 (1296)
T ss_pred ccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEE
Confidence 3467899999999999999998887654 788999999999986554332221 2234679999999999999
Q ss_pred CCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeC
Q 010854 312 DECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 390 (499)
Q Consensus 312 d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~ 390 (499)
|+.+++++.|+ .|||+| ++....+ ++.+++.+...|...+...+.+||+|||+|+++++|+++++||.||+||++
T Consensus 791 d~~~~~~~~g~--~Gel~i~g~~~~~G--Y~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~ 866 (1296)
T PRK10252 791 DARMRPVPPGV--AGDLYLTGIQLAQG--YLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIR 866 (1296)
T ss_pred CCCCCCCCCCC--ceEEEecccccchh--hCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEe
Confidence 99999999999 599999 5554443 344555566666666666678899999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeC----CCCCC-ceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeE
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVS----PAGGG-PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSL 465 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~----~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 465 (499)
|++|+|.|||++|. .+|+|.+++|+... +...+ ...++++++...+...+.+++++ ++.++|+.|+.|..
T Consensus 867 G~ri~~~eIE~~l~-~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~----~l~~~Lp~~~~P~~ 941 (1296)
T PRK10252 867 GQRIELGEIDRAMQ-ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQA----QLRERLPPHMVPVV 941 (1296)
T ss_pred eEEecHHHHHHHHH-hCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHH----HHHhhCchhcCCcE
Confidence 99999999999997 89999999877552 11122 24799999987665445555554 46678999999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHHH
Q 010854 466 VKVVPEFPRTASNKLLRRVLRDQ 488 (499)
Q Consensus 466 ~~~~~~iP~t~~GKv~r~~l~~~ 488 (499)
++.+++||+|++||++|++|++.
T Consensus 942 ~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 942 LLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEecCCCCCCCcChhHHhcCCC
Confidence 99999999999999999999753
No 76
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-55 Score=453.81 Aligned_cols=470 Identities=19% Similarity=0.193 Sum_probs=354.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc-C-
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-A- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~- 79 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.+++++++++.+|++++... ......+...... .
T Consensus 57 ~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~ 135 (540)
T PRK06164 57 VRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG-IDFAAILAAVPPDALP 135 (540)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc-ccHHHHhhcccccccC
Confidence 689999999999999999999999999999999999999999999999999999999875311 0011111111110 0
Q ss_pred CC-ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 80 PL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
.. ..+++........ ......+.++...... .............+++++++|||||||.||+|+++|+++...+.
T Consensus 136 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~ 211 (540)
T PRK06164 136 PLRAIAVVDDAADATP---APAPGARVQLFALPDP-APPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHAR 211 (540)
T ss_pred CcceEEEeccCcccCC---CCCccccccccccccc-CCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHH
Confidence 11 1122211111000 0001111111111100 00011112234568999999999999999999999999998888
Q ss_pred hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 238 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 238 (499)
.....+++..++++++.+|++|.+++..++.++..|+++++.+ .+++..+++.|+++++|+++++|+++..|.+. ...
T Consensus 212 ~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~-~~~ 289 (540)
T PRK06164 212 AIARAYGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDT-AGE 289 (540)
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh-hcc
Confidence 8777788899999999999999999988999999999999886 56788999999999999999999999999887 234
Q ss_pred cccccceeEEEeecC-CCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC--CCccccccccC-CCceEEEEC-C
Q 010854 239 GLDWTKIRSFASTGE-TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-E 313 (499)
Q Consensus 239 ~~~l~~l~~i~~~G~-~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~--~~~~~~~g~~~-~~~~~~i~d-~ 313 (499)
..++++++.+..+|. ....+...++... ++.+++.||+||++..+....... .......|.+. +++.++|+| +
T Consensus 290 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~ 367 (540)
T PRK06164 290 RADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQ 367 (540)
T ss_pred cCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCC
Confidence 556788988877663 4444555565544 788999999999987655443322 12234567775 899999999 7
Q ss_pred CCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCce
Q 010854 314 CGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGI 392 (499)
Q Consensus 314 ~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~ 392 (499)
++.+++.|+ .|||+| ++..+.+ ++.+++.+...+ ..++||+|||+|+++++|++++.||.+|+++++|.
T Consensus 368 ~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~------~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~ 437 (540)
T PRK06164 368 DGALLPDGE--SGEIEIRAPSLMRG--YLDNPDATARAL------TDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGF 437 (540)
T ss_pred CCcCCCCCC--eeEEEEeccccccc--ccCCchhhhhcc------cCCCceecCCeEEEcCCceEEEEeecCCeEEECCE
Confidence 889999998 599999 6555543 223333332222 34679999999999999999999999999999999
Q ss_pred eechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCC
Q 010854 393 KTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEF 472 (499)
Q Consensus 393 ~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~i 472 (499)
+|+|.+||+++. .+++|.+++|++++. ..+ +.+++++++.++...+.+++.++ +.+.|++|+.|..+++++++
T Consensus 438 ~i~p~eIE~~l~-~~~~v~~~~v~~~~~-~~~-~~~~~~vv~~~~~~~~~~~l~~~----~~~~l~~~~~P~~i~~~~~~ 510 (540)
T PRK06164 438 LVNPAEIEHALE-ALPGVAAAQVVGATR-DGK-TVPVAFVIPTDGASPDEAGLMAA----CREALAGFKVPARVQVVEAF 510 (540)
T ss_pred EcCHHHHHHHHH-hCCCceeEEEEecCC-CCc-eeEEEEEEeCCCCCCCHHHHHHH----HHhhcccCcCCcEEEEecCC
Confidence 999999999996 899999999999883 334 78899999877655566555555 55688899999999999999
Q ss_pred CCCCCc---HHHHHHHHHHHHhhhhhcc
Q 010854 473 PRTASN---KLLRRVLRDQIKHELSVRS 497 (499)
Q Consensus 473 P~t~~G---Kv~r~~l~~~~~~~~~~~~ 497 (499)
|+|++| |++|++|++++++.+.++.
T Consensus 511 P~t~~g~~~Ki~r~~L~~~~~~~~~~~~ 538 (540)
T PRK06164 511 PVTESANGAKIQKHRLREMAQARLAAER 538 (540)
T ss_pred CCCCCCccccccHHHHHHHHHHhhhhhc
Confidence 999999 9999999999998887764
No 77
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-56 Score=451.97 Aligned_cols=443 Identities=20% Similarity=0.195 Sum_probs=345.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++|++|+++++|+++++++++||+++|++++|+++..+++++.+++++++++.+|+++.... .+..+. .
T Consensus 51 ~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~------~~~~~~----~ 120 (529)
T PRK07867 51 PTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE------LLDGLD----P 120 (529)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH------HHHhhc----c
Confidence 468999999999999999999999999999999999999999999999999999999875421 111111 1
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++... ...+.+++..... .........++++++++|||||||.||+|+++|+++...+....
T Consensus 121 ~~~~~~~~-----------~~~~~~~l~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~ 185 (529)
T PRK07867 121 GVRVINVD-----------SPAWADELAAHRD----AEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLA 185 (529)
T ss_pred CceEEEec-----------cccHHHHhcccCC----CCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHH
Confidence 11122111 1124444432211 11122335679999999999999999999999999988888877
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++.+|+++..+|++|.+++.. ++.++..|+++++.+ .++++.+++.++++++|++.++|+.+..++........
T Consensus 186 ~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~ 264 (529)
T PRK07867 186 QRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDD 264 (529)
T ss_pred HhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccc
Confidence 7788999999999999999999876 777889999988875 56788999999999999999999999988876543333
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYP 319 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~ 319 (499)
..+++|. +.||+.+++.. ..+.+.+ ++++++.||+||++......+ ....+++|.|+++ ++++| +++.+++
T Consensus 265 ~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~~---~~~~~~~g~~~~~--~~i~~~~~~~~~~ 336 (529)
T PRK07867 265 ADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRTP---DTPPGALGPLPPG--VAIVDPDTGTECP 336 (529)
T ss_pred cccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccCC---CCCCCCcCCCCCC--EEEEECCCCCCCC
Confidence 3457774 55788776654 4555555 788999999999886543222 2234678999998 67777 6788888
Q ss_pred CCC----------CcceeeEe-c-ccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCee
Q 010854 320 DDQ----------PCVGEVGL-F-PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM 387 (499)
Q Consensus 320 ~g~----------~~~Gei~v-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i 387 (499)
.|+ ..+||+++ . +..+.+ ++.+++.+...+ .++||+|||+++++++|++++.||.||++
T Consensus 337 ~g~~~~~~~~~~~~~~Gel~i~~g~~~~~g--y~~~~~~~~~~~-------~~g~~~TGD~~~~~~~g~l~~~GR~~d~i 407 (529)
T PRK07867 337 PAEDADGRLLNADEAIGELVNTAGPGGFEG--YYNDPEADAERM-------RGGVYWSGDLAYRDADGYAYFAGRLGDWM 407 (529)
T ss_pred CCccccccccccCCcceEEEEecCCccccc--ccCChHhhhhhh-------cCCeEeeccEEEEeCCCcEEEeccccCeE
Confidence 776 01399987 3 333322 222222222222 24799999999999999999999999999
Q ss_pred eeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEE
Q 010854 388 NLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVK 467 (499)
Q Consensus 388 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~ 467 (499)
+++|++|+|.+||++|. .+|+|.+++|++.+++..+ ++++++++..++...+.+++.+.+++ ...|+.|+.|..++
T Consensus 408 ~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~~~~g-~~~~a~vv~~~~~~~~~~~l~~~~~~--~~~l~~~~~P~~i~ 483 (529)
T PRK07867 408 RVDGENLGTAPIERILL-RYPDATEVAVYAVPDPVVG-DQVMAALVLAPGAKFDPDAFAEFLAA--QPDLGPKQWPSYVR 483 (529)
T ss_pred EECCEEeCHHHHHHHHH-hCCCeeEEEEEeccCCCCC-eeEEEEEEECCCCCCCHHHHHHHHHh--hccCCcccCCeEEE
Confidence 99999999999999997 8999999999999998888 89999999887766777777777653 23599999999999
Q ss_pred EcCCCCCCCCcHHHHHHHHHHHHh
Q 010854 468 VVPEFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 468 ~~~~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++++||+|++||++|+.|++++..
T Consensus 484 ~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 484 VCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred EeeccCCCCCcceeHHHHHHhcCC
Confidence 999999999999999999987754
No 78
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-56 Score=451.18 Aligned_cols=432 Identities=22% Similarity=0.232 Sum_probs=348.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..++++++++.+|+++.... .....
T Consensus 49 ~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~------~~~~~------ 116 (483)
T PRK03640 49 VKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEA------KLIPG------ 116 (483)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhH------HHhhh------
Confidence 578999999999999999999999999999999999999999999999999999999874321 00000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+.++...... ..........+++++++|||||||.||+|.++|.++...+....
T Consensus 117 ------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~ 174 (483)
T PRK03640 117 ------------------ISVKFAELMNGPKE----EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSA 174 (483)
T ss_pred ------------------ccccHHHHhhcccc----cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHH
Confidence 00123443332211 11122234578999999999999999999999999888776666
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..++++++|+++..+|++|.+++..++.++..|+++++.+ ..++..+++.++++++|++.++|+++..|.+..... ..
T Consensus 175 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~ 252 (483)
T PRK03640 175 LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TY 252 (483)
T ss_pred HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-cc
Confidence 6678999999999999999999888899999999999887 467899999999999999999999999998764332 23
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC-CCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
..++|.++++|+.+++.+.+.++.. ++++++.||+||++..+..... ......+++|.|++++++++.|+ +++++.
T Consensus 253 ~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~ 329 (483)
T PRK03640 253 PSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD-GVVVPP 329 (483)
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC-CCcCCC
Confidence 4689999999999999988877653 7889999999998754433322 23445689999999999999986 478999
Q ss_pred CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHH
Q 010854 321 DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 399 (499)
Q Consensus 321 g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~i 399 (499)
|+. ||++| ++..+.+ +..+++.+...+ .++||+|||+++++++|++++.||.+|++|.+|.+|+|.+|
T Consensus 330 g~~--Gel~v~g~~~~~g--y~~~~~~~~~~~-------~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~i 398 (483)
T PRK03640 330 FEE--GEIVVKGPNVTKG--YLNREDATRETF-------QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEI 398 (483)
T ss_pred CCc--eEEEEECcchhhh--hcCCHHHHHHHH-------hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHH
Confidence 984 99999 5544432 112222222222 24699999999999999999999999999999999999999
Q ss_pred HHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcH
Q 010854 400 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 479 (499)
Q Consensus 400 E~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GK 479 (499)
|+.+. .+++|.++++++.+++..+ +.++++++... ..+.+++.++ +++.|+.|+.|..+++++++|+|++||
T Consensus 399 e~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~----~~~~l~~~~~p~~i~~~~~iP~t~~gK 470 (483)
T PRK03640 399 EEVLL-SHPGVAEAGVVGVPDDKWG-QVPVAFVVKSG--EVTEEELRHF----CEEKLAKYKVPKRFYFVEELPRNASGK 470 (483)
T ss_pred HHHHH-hCCCeeEEEEEeCCCcccC-CceEEEEEeCC--CCCHHHHHHH----HHHhccCCCCCcEEEEeCCCCCCCccc
Confidence 99996 8999999999999887776 77888787543 3455555544 567899999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 010854 480 LLRRVLRDQIKH 491 (499)
Q Consensus 480 v~r~~l~~~~~~ 491 (499)
++|++|++.+++
T Consensus 471 ~~r~~l~~~~~~ 482 (483)
T PRK03640 471 LLRHELKQLVEE 482 (483)
T ss_pred eeHHHHHHHHhh
Confidence 999999998874
No 79
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.3e-57 Score=548.95 Aligned_cols=443 Identities=21% Similarity=0.206 Sum_probs=364.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++......... ....
T Consensus 558 v~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~---------~~~~ 628 (5163)
T PRK12316 558 VGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL---------AAGV 628 (5163)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc---------ccCc
Confidence 6899999999999999999999999999999999999999999999999999999998753211000 0000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
..+.+.. ........ ..........++++|+++|||||||.||||+++|+++.+.+.+..
T Consensus 629 ~~~~~~~---------------~~~~~~~~-----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 688 (5163)
T PRK12316 629 QVLDLDR---------------PAAWLEGY-----SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQ 688 (5163)
T ss_pred eEEEecC---------------cchhhccC-----CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHH
Confidence 1111100 00000100 011112234678999999999999999999999999999999888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC--CCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..++++++|+++...|++|..++..++.+++.|+++++.+. ..+++.+++.++++++|++.++|++++.|++... .
T Consensus 689 ~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~ 766 (5163)
T PRK12316 689 QAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--V 766 (5163)
T ss_pred HhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--c
Confidence 88999999999999999999999899999999999999864 3467899999999999999999999999987543 2
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCC-CCCCCccccccccCCCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
.+++++|.+++|||++++++.+.+...++++++++.||+||++..+.... ........++|+|+++++++|+|++++++
T Consensus 767 ~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~ 846 (5163)
T PRK12316 767 ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPV 846 (5163)
T ss_pred ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCC
Confidence 35789999999999999999998887777889999999999985433222 12233456899999999999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechH
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 397 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~ 397 (499)
+.|+ +|||+| ++..+.+ ++.+++.+...|...+...+++||+|||+|++++||+|+++||.||+||++|++|+|.
T Consensus 847 p~G~--~GEl~i~G~~v~~G--Yl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~ 922 (5163)
T PRK12316 847 PVGV--LGELYLAGRGLARG--YHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELG 922 (5163)
T ss_pred CCCC--ceEEEecccccChh--hCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChH
Confidence 9999 599999 6655543 4456666666676666667889999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTAS 477 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~ 477 (499)
|||++|. .||+|.+++|++.+ + +.++++|++.++.....++++ +++.++|+.|+.|..++++++||+|++
T Consensus 923 EIE~~l~-~~p~V~~a~V~~~~----~-~~lva~vv~~~~~~~~~~~l~----~~l~~~Lp~y~vP~~i~~v~~lP~t~~ 992 (5163)
T PRK12316 923 EIEARLL-EHPWVREAAVLAVD----G-KQLVGYVVLESEGGDWREALK----AHLAASLPEYMVPAQWLALERLPLTPN 992 (5163)
T ss_pred HHHHHHH-hCCCcceEEEEEcC----C-CeEEEEEEccCCCCCCHHHHH----HHHHhhCCCccCCCeEEEHhhCCCCCC
Confidence 9999996 89999999999886 4 889999998775544544444 446678999999999999999999999
Q ss_pred cHHHHHHHHHHH
Q 010854 478 NKLLRRVLRDQI 489 (499)
Q Consensus 478 GKv~r~~l~~~~ 489 (499)
||++|++|++..
T Consensus 993 GKidr~~L~~~~ 1004 (5163)
T PRK12316 993 GKLDRKALPAPE 1004 (5163)
T ss_pred CChhHHhhcCcc
Confidence 999999998654
No 80
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=8e-56 Score=457.14 Aligned_cols=460 Identities=20% Similarity=0.251 Sum_probs=352.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++.+|+++.... .+.......+.
T Consensus 73 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~------~~~~~~~~~~~ 146 (560)
T PRK08751 73 LKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGT------TVQQVIADTPV 146 (560)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHH------HHHHHhhCCCc
Confidence 689999999999999999999999999999999999999999999999999999999875321 11111111111
Q ss_pred ceEEecccCC-------------------CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010854 82 KAIVLPAIGN-------------------DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGE 142 (499)
Q Consensus 82 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 142 (499)
..++...... .......+....+.+....... ..........+++++++|||||||.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~ 222 (560)
T PRK08751 147 KQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGV 222 (560)
T ss_pred cEEEEechhhhcccccchhhhhhhhhhhccccccCCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCC
Confidence 1111100000 0000001122344444433221 1112233567899999999999999
Q ss_pred CceEEecchhhHHHhhhcceecc----CcCC-cEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHh
Q 010854 143 PKAIPWTQLSSIRCTAEGWAHID----LKVG-DVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDA 216 (499)
Q Consensus 143 pk~v~~s~~~~~~~~~~~~~~~~----~~~~-~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~ 216 (499)
||+|.++|.++...+......+. +..+ +.++...|++|.+++.. .+.++..|++.++.....++..+++.++++
T Consensus 223 PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 302 (560)
T PRK08751 223 AKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKT 302 (560)
T ss_pred CCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhc
Confidence 99999999999877665544332 3344 56778899999998765 666777888887776566788999999999
Q ss_pred CCeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcc
Q 010854 217 GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 296 (499)
Q Consensus 217 ~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~ 296 (499)
++|++.++|+++..+.+.....+.+++++|.+++||+++++.+...+...+ +..+++.||+||++..+..+........
T Consensus 303 ~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 381 (560)
T PRK08751 303 RFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYN 381 (560)
T ss_pred ceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccC
Confidence 999999999999999987666667788999999999999999988887655 7889999999999876654443333456
Q ss_pred ccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCc
Q 010854 297 GAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGG 375 (499)
Q Consensus 297 ~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G 375 (499)
+++|.|++++.++++|+++.+++.|+ .||+++ ++..+.+ ++.+++.+...+ ++++||+|||+|+++++|
T Consensus 382 ~~vG~~~~~~~v~i~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~------~~~g~~~TGD~~~~~~~g 451 (560)
T PRK08751 382 GSIGLPIPSTDACIKDDAGTVLAIGE--IGELCIKGPQVMKG--YWKRPEETAKVM------DADGWLHTGDIARMDEQG 451 (560)
T ss_pred CCcCccCCCceEEEECCCCCCCCCCC--ceEEEEecCccchh--hcCChhhhhhcc------ccCCCccccceEEEcCCc
Confidence 78999999999999999999999998 599999 5443322 222333333233 345799999999999999
Q ss_pred eEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHh
Q 010854 376 YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 455 (499)
Q Consensus 376 ~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~ 455 (499)
++++.||.+|+++++|.+|+|.+||+++. .+++|.+++|+++++...+ +.+.++++... ...+.+++.++ +.+
T Consensus 452 ~l~i~GR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~~-~~~~~~~l~~~----~~~ 524 (560)
T PRK08751 452 FVYIVDRKKDMILVSGFNVYPNEIEDVIA-MMPGVLEVAAVGVPDEKSG-EIVKVVIVKKD-PALTAEDVKAH----ARA 524 (560)
T ss_pred eEEEEeechhheeECCEEEcHHHHHHHHH-hCcCeeeeEEEecCCCCCC-ceEEEEEEcCC-CCCCHHHHHHH----HHH
Confidence 99999999999999999999999999996 8999999999999988777 77787777543 33344444444 556
Q ss_pred hcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHH
Q 010854 456 KLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 489 (499)
Q Consensus 456 ~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~ 489 (499)
+++.|+.|..++++++||+|++||++|++|++..
T Consensus 525 ~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 525 NLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred hhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 8899999999999999999999999999998763
No 81
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-56 Score=454.80 Aligned_cols=429 Identities=18% Similarity=0.165 Sum_probs=338.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++.+++++.+.+. + .....
T Consensus 82 i~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~------~----~~~~~ 151 (516)
T PRK13383 82 VAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAER------I----AGADD 151 (516)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHH------H----Hhhhc
Confidence 6799999999999999999999999999999999999999999999999999999998754211 1 11111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH--HHhhh
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI--RCTAE 159 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~--~~~~~ 159 (499)
....+.. . . .. ..... . .....++.++++|||||||.||+|+++|.... .....
T Consensus 152 ~~~~~~~--~---------~---~~--~~~~~------~--~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~ 207 (516)
T PRK13383 152 AVAVIDP--A---------T---AG--AEESG------G--RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVT 207 (516)
T ss_pred ceEEecc--c---------h---hh--hhcCC------C--CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHh
Confidence 1111110 0 0 00 00000 0 01123566789999999999999999987322 11222
Q ss_pred cceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCC--
Q 010854 160 GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-- 237 (499)
Q Consensus 160 ~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~-- 237 (499)
....++++++|+++..+|++|.+++..++.++..|++++..+ .++++.+++.++++++|.+.++|+++..+.+....
T Consensus 208 ~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 286 (516)
T PRK13383 208 ILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR 286 (516)
T ss_pred HHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc
Confidence 233457889999999999999999988888899999998875 56788999999999999999999999999876432
Q ss_pred CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCC
Q 010854 238 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVP 317 (499)
Q Consensus 238 ~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~ 317 (499)
...+++++|.++++|+++++++.+++.+.+ +..+++.||+||++..+...........+++|+|+|+++++|+|+++++
T Consensus 287 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 365 (516)
T PRK13383 287 ARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRP 365 (516)
T ss_pred ccCCCCceEEEEECCCCCCHHHHHHHHHHc-CchhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCC
Confidence 233568999999999999999999998776 6789999999999865544433333456789999999999999999999
Q ss_pred CCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeech
Q 010854 318 YPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 396 (499)
Q Consensus 318 ~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~ 396 (499)
++.|+ .|||++ ++..+.+ |+........++||+|||++++|++|++++.||.+|++|++|.+|+|
T Consensus 366 ~~~g~--~Gel~v~g~~~~~~------------Y~~~~~~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~ 431 (516)
T PRK13383 366 VGPRV--TGRIFVGGELAGTR------------YTDGGGKAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYP 431 (516)
T ss_pred CCCCC--ceEEEEecCccccc------------ccCCchhheecCceecceeEEEcCCccEEEeccccceEEECCEEECH
Confidence 99998 599999 4433332 11111111235799999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCC
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
.+||++|. .+|+|.+++++++++...+ +.+.++|+..++...+.+++.++ +.++++.|+.|..++++++||+|+
T Consensus 432 ~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~~~~~p~~i~~v~~iP~t~ 505 (516)
T PRK13383 432 RAVENALA-AHPAVADNAVIGVPDERFG-HRLAAFVVLHPGSGVDAAQLRDY----LKDRVSRFEQPRDINIVSSIPRNP 505 (516)
T ss_pred HHHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEEEECCCCCCCHHHHHHH----HHHhcccCCCCcEEEEeCCCCCCC
Confidence 99999996 8999999999999988777 88999999876655455554444 556788999999999999999999
Q ss_pred CcHHHHHHHH
Q 010854 477 SNKLLRRVLR 486 (499)
Q Consensus 477 ~GKv~r~~l~ 486 (499)
+||++|+.|+
T Consensus 506 ~gKi~r~~L~ 515 (516)
T PRK13383 506 TGKVLRKELP 515 (516)
T ss_pred CCcCcHHHhC
Confidence 9999999874
No 82
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.2e-55 Score=450.57 Aligned_cols=447 Identities=18% Similarity=0.177 Sum_probs=359.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+.++++++|||+++|++++|+++..+.+++.++++..+++.++++..... . ...
T Consensus 49 ~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~ 115 (503)
T PRK04813 49 LPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL------E-------ILG 115 (503)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc------c-------ccC
Confidence 578999999999999999999999999999999999999999999999999999999874210 0 000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.....++++...... ...........++++++++|||||||.||+|.++|+++...+.+..
T Consensus 116 -----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~ 176 (503)
T PRK04813 116 -----------------IPVITLDELKDIFAT--GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWML 176 (503)
T ss_pred -----------------CcEEehHHhhhhhhc--cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHH
Confidence 001111121111100 0011112234678899999999999999999999999998887777
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC--CChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+.+..+++++...|++|..++..++.++..|+++++.+.. .++..+++.++++++|.+..+|++++.+........
T Consensus 177 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~ 256 (503)
T PRK04813 177 EDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNE 256 (503)
T ss_pred HHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCc
Confidence 778889999999999999999988888999999999988753 357889999999999999999999988776655455
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC----CCCccccccccCCCceEEEECCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~i~d~~g 315 (499)
.++++++.++++|+++++.+.+++.+.+++..+++.||+||++..+...... ......++|++.++++++|+|++|
T Consensus 257 ~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~ 336 (503)
T PRK04813 257 EHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEG 336 (503)
T ss_pred ccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCC
Confidence 6688999999999999999999999988788899999999987654432211 123445799999999999999999
Q ss_pred CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 316 VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
.+++.|+ .||+++ ++..+.+ ++.++..+...|. ...+.+||+|||++++ ++|++++.||.+|+++++|++|
T Consensus 337 ~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~~---~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v 408 (503)
T PRK04813 337 TKLPDGE--QGEIVISGPSVSKG--YLNNPEKTAEAFF---TFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRI 408 (503)
T ss_pred CCCCCCC--ceEEEEeccccccc--cCCChhHhHHhhc---cCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEe
Confidence 9999998 599999 4433322 1222222222221 1145679999999999 9999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.+||+++. .+|+|.++++++.++...+ +.+++++++.++......++.+.+++++.++++.|+.|.+++++++||+
T Consensus 409 ~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~ 486 (503)
T PRK04813 409 ELEEIEQNLR-QSSYVESAVVVPYNKDHKV-QYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPL 486 (503)
T ss_pred CHHHHHHHHH-hCCCcceEEEEEeeCCCCc-cEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCC
Confidence 9999999996 8999999999997776555 8888998877653333446777888889899999999999999999999
Q ss_pred CCCcHHHHHHHHHHHH
Q 010854 475 TASNKLLRRVLRDQIK 490 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~ 490 (499)
|++||++|++|++.++
T Consensus 487 t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 487 TPNGKIDRKALIEEVN 502 (503)
T ss_pred CCCCCCcHHHHHHHhc
Confidence 9999999999998875
No 83
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5e-55 Score=446.09 Aligned_cols=456 Identities=20% Similarity=0.205 Sum_probs=353.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.++++...... +......
T Consensus 33 ~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~---------~~~~~~~ 103 (509)
T PRK12406 33 VRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLHG---------LASALPA 103 (509)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhhh---------hhhhhhc
Confidence 6899999999999999999999999999999999999999999999999999999998754321 1111100
Q ss_pred ceEEecccCC---------CCC-CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecch
Q 010854 82 KAIVLPAIGN---------DVG-IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQL 151 (499)
Q Consensus 82 ~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~ 151 (499)
...++..... ... .........++++...... ......+++++++|||||||.||+|.++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~ 175 (509)
T PRK12406 104 GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP--------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAP 175 (509)
T ss_pred ccceeecccccccccccccccccccCCCCccCHHHHhcccCc--------cCCCCCCCceEEEECCCCCCCCceEEEech
Confidence 0111000000 000 0112234455554432111 112346899999999999999999998765
Q ss_pred hh---HHHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHH
Q 010854 152 SS---IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLV 228 (499)
Q Consensus 152 ~~---~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l 228 (499)
.. ..........+++.++++++..+|++|..+....+.++..|+++++.+ ..+++.+++.++++++|.+.++|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~ 254 (509)
T PRK12406 176 TPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMF 254 (509)
T ss_pred hHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHH
Confidence 43 333333445677899999999999999988777666788999998876 46789999999999999999999999
Q ss_pred HHHHccCC--CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCc
Q 010854 229 KAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA 306 (499)
Q Consensus 229 ~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~ 306 (499)
..|++... ....++++++.++.+|+++++++..++.+.+ +..+++.||+||++.+............+++|.|++++
T Consensus 255 ~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~ 333 (509)
T PRK12406 255 IRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGA 333 (509)
T ss_pred HHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecCcccccccCCCcCccCCCc
Confidence 99987543 2345678999999999999999999988765 67899999999999766544333334557899999999
Q ss_pred eEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCC
Q 010854 307 GLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 385 (499)
Q Consensus 307 ~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d 385 (499)
.++++|+++++++.|+ .||+++ ++..... .+..+++.+.. ...++||+|||+++++++|++++.||.+|
T Consensus 334 ~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~~-~y~~~~~~~~~-------~~~~~~~~TGD~~~~~~~g~~~~~GR~~d 403 (509)
T PRK12406 334 ELRFVDEDGRPLPQGE--IGEIYSRIAGNPDF-TYHNKPEKRAE-------IDRGGFITSGDVGYLDADGYLFLCDRKRD 403 (509)
T ss_pred EEEEECCCCCCCCCCC--ceEEEEECCccccc-cccCCchhccc-------ccCCCCeEEccEEEEcCCceEEEeecccc
Confidence 9999999999999998 599999 4433221 12112221111 12467999999999999999999999999
Q ss_pred eeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeE
Q 010854 386 TMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSL 465 (499)
Q Consensus 386 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 465 (499)
++|++|.+|+|.+||++|. .+++|.++++++.++...+ +.+++++++.++...+.+++.+. +.+.+++|+.|..
T Consensus 404 ~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----l~~~l~~~~~P~~ 477 (509)
T PRK12406 404 MVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAEFG-EALMAVVEPQPGATLDEADIRAQ----LKARLAGYKVPKH 477 (509)
T ss_pred eEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccccC-ceeEEEEEECCCCCCCHHHHHHH----HHHhcccCCCCcE
Confidence 9999999999999999996 8999999999999887767 78888998876554455555554 5568889999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 466 VKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 466 ~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+++++++|+|++||++|++|++.+...
T Consensus 478 i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 478 IEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred EEEeccCCCCCccchhHHHHHHHHHhh
Confidence 999999999999999999999877653
No 84
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.5e-56 Score=462.52 Aligned_cols=466 Identities=18% Similarity=0.164 Sum_probs=340.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|+++|++++|||+++|++++|+++.++++++.+++++++++++|+++.... ..+.......+.
T Consensus 98 v~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~ 172 (660)
T PLN02430 98 AEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIK-----ELLEPDCKSAKR 172 (660)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHH-----HHHhhhcccCCC
Confidence 689999999999999999999999999999999999999999999999999999999864210 011111111111
Q ss_pred ceEEecccCCCCC-----CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 82 KAIVLPAIGNDVG-----IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 82 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
...++........ ........+|+++...+...+ .......++|+++++|||||||.||||++||+++...
T Consensus 173 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~ 248 (660)
T PLN02430 173 LKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENP----SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATF 248 (660)
T ss_pred ceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCC----CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHH
Confidence 2222221111000 000112346777765443211 1122345799999999999999999999999999887
Q ss_pred hhhcce---e--ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 157 TAEGWA---H--IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 157 ~~~~~~---~--~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
+..... . ..++++|++++++|++|.++....+.++..|+++++... ++..+.+.+++.+||++.++|.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l 326 (660)
T PLN02430 249 VRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERI 326 (660)
T ss_pred HHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHH
Confidence 655422 1 246789999999999999998776667889999988753 467899999999999999999999877
Q ss_pred HccCC-------------------------------C--Cc-cc----------c-cceeEEEeecCCCChhhHHHHHhh
Q 010854 232 RNTNC-------------------------------L--EG-LD----------W-TKIRSFASTGETSNVDDDLWLSSK 266 (499)
Q Consensus 232 ~~~~~-------------------------------~--~~-~~----------l-~~l~~i~~~G~~l~~~~~~~~~~~ 266 (499)
.+... . .. .+ + +++|.+++||+++++++.++++ .
T Consensus 327 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~ 405 (660)
T PLN02430 327 HEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-V 405 (660)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-H
Confidence 64210 0 00 00 1 5899999999999999876665 4
Q ss_pred cccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC--CCC-CCCCCCCCcceeeEe-cccccccccccc
Q 010854 267 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-FPLYLGASDRLL 342 (499)
Q Consensus 267 ~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d--~~g-~~~~~g~~~~Gei~v-~~~~~~~~~~~~ 342 (499)
+.++.+++.||+||+++.............+++|.|.+++++++.| +.| .+++.+. .|||+| ++..+.+ ++.
T Consensus 406 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~--~GEi~vrg~~v~~G--Y~~ 481 (660)
T PLN02430 406 TSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPP--RGEICVRGKCLFSG--YYK 481 (660)
T ss_pred hcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCC--cceEEecCCCcccc--ccC
Confidence 4356799999999998765544433334568999999999999986 333 3444444 499999 6655543 333
Q ss_pred cccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEeCCC
Q 010854 343 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPA 421 (499)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~ 421 (499)
+++.+...+ .++||+|||+|++|++|+|++.||.||+||. +|++|+|.+||+++. .||.|.+++|++..
T Consensus 482 ~~e~t~~~~-------~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~-~~p~V~~~~V~G~~-- 551 (660)
T PLN02430 482 NPELTEEVM-------KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYG-QNPIVEDIWVYGDS-- 551 (660)
T ss_pred ChHHhhhhh-------hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHh-cCCCeeEEEEEecC--
Confidence 444433333 2689999999999999999999999999995 799999999999996 99999999999832
Q ss_pred CCCceEEEEEEEecCCC----------CC------CHHHHHH----HHHHHH-HhhcCCceeeeEEEEcCC-C-----CC
Q 010854 422 GGGPEVLVIFVVLKKGF----------TS------QPDKLKM----IFSKAI-QSKLNPLFKVSLVKVVPE-F-----PR 474 (499)
Q Consensus 422 ~~~~~~~~~~v~~~~~~----------~~------~~~~l~~----~~~~~~-~~~l~~~~~p~~~~~~~~-i-----P~ 474 (499)
.+ +.++|+|++.... .. +..++++ .+.+.. +++|+.|.++++|++.++ + .+
T Consensus 552 -~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~l 629 (660)
T PLN02430 552 -FK-SMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLV 629 (660)
T ss_pred -Cc-ceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcC
Confidence 23 7889999876421 00 1122333 333322 346999999999998763 3 37
Q ss_pred CCCcHHHHHHHHHHHHhhhhh
Q 010854 475 TASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~~~~~~ 495 (499)
|+++|+.|+.+.+.|++++++
T Consensus 630 T~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 630 TATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred ChhhhhhhHHHHHHHHHHHHH
Confidence 999999999999999998865
No 85
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.4e-55 Score=449.98 Aligned_cols=453 Identities=22% Similarity=0.263 Sum_probs=357.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.+|+++... +.+.+.....+.
T Consensus 52 ~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~ 125 (508)
T TIGR02262 52 VKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPH 125 (508)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999987532 222222222211
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh-c
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-G 160 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~-~ 160 (499)
...++..... ......+.++...... ...+....++++++++|||||||.||+|+++|+++...+.. .
T Consensus 126 ~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 194 (508)
T TIGR02262 126 LEHRVVVGRP------EAGEVQLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA 194 (508)
T ss_pred ccEEEEeCCC------CcccccHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh
Confidence 1111111111 0122344444332211 12223445789999999999999999999999999877655 3
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
...++++++|+++..+|++|.+++.. ++.++..|+++++.+...++..+++.|+++++|.+.++|+++..+++......
T Consensus 195 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~ 274 (508)
T TIGR02262 195 RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPA 274 (508)
T ss_pred HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccc
Confidence 34568899999999999999999865 77889999999998766778999999999999999999999998877654444
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 319 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~ 319 (499)
...+++|.++++|+.+++++.+.+.+.+ ++++++.||+||++.+...+.. .....+++|.|++++.++++|+++.+++
T Consensus 275 ~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~v~i~d~~~~~~~ 352 (508)
T TIGR02262 275 EDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGYRLRLVGDGGQDVA 352 (508)
T ss_pred cccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCCc-cCCCCCCcCCCCCCcEEEEECCCCCCCC
Confidence 4567899999999999999999888776 7889999999999876554332 2334578999999999999999999999
Q ss_pred CCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHH
Q 010854 320 DDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 398 (499)
Q Consensus 320 ~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~ 398 (499)
.|+ +||+++ ++..+.+ ++.+++.+...+ .++||+|||+++++++|.+++.||.+|+++++|.+|+|.+
T Consensus 353 ~g~--~Gel~i~~~~~~~g--Y~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ 421 (508)
T TIGR02262 353 AGE--PGELLISGPSSATM--YWNNRAKTRDTF-------QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFE 421 (508)
T ss_pred CCC--eeEEEEecCccccc--cCCCHHHhHhhh-------hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHH
Confidence 998 599999 4333322 222222222222 2469999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCc
Q 010854 399 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 478 (499)
Q Consensus 399 iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~G 478 (499)
||+++. .+++|.++++++.++...+ +++.++++..++... .+.+.+.+++.++++|+.|+.|..++++++||+|++|
T Consensus 422 ie~~l~-~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~g 498 (508)
T TIGR02262 422 IESALI-QHPAVLEAAVVGVEDEDGL-IKPKAFIVLRPGQDI-DTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATG 498 (508)
T ss_pred HHHHHH-hCCCeeEEEEEeccccCCC-ceeEEEEEeCCCCcc-ccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCC
Confidence 999996 8999999999998877666 888899988765432 2344556777788899999999999999999999999
Q ss_pred HHHHHHHHH
Q 010854 479 KLLRRVLRD 487 (499)
Q Consensus 479 Kv~r~~l~~ 487 (499)
|++|+.|++
T Consensus 499 Ki~r~~l~~ 507 (508)
T TIGR02262 499 KIQRFKLRE 507 (508)
T ss_pred cEehhhccC
Confidence 999999875
No 86
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-56 Score=545.10 Aligned_cols=446 Identities=19% Similarity=0.180 Sum_probs=361.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++++++++++++|||+++|++++|++|.++.+++.++++++++++++++....... .....
T Consensus 2050 v~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~----------~~~~~ 2119 (5163)
T PRK12316 2050 VGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERL----------PLPAG 2119 (5163)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhc----------ccccc
Confidence 68999999999999999999999999999999999999999999999999999999987532110 00000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
.. .+... ....+... ..........++++|+++|||||||.||||+++|+++.+.+.+..
T Consensus 2120 ~~-~~~~~-------------~~~~~~~~------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 2179 (5163)
T PRK12316 2120 VA-RLPLD-------------RDAEWADY------PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAG 2179 (5163)
T ss_pred cc-eEecc-------------chhhhhcc------CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHH
Confidence 00 00000 00000000 011112345689999999999999999999999999999998888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++++|+++.+.|++|..++..++.+++.|+++++.+. ..+++.+++.|+++++|++.++|++++.|.+.......
T Consensus 2180 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 2259 (5163)
T PRK12316 2180 ERYELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGR 2259 (5163)
T ss_pred HhcCCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccC
Confidence 88899999999999999999888889999999999977653 34678999999999999999999999999876543322
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCC----CccccccccCCCceEEEECCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP----QAFGAFSTATMTAGLVILDECGV 316 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~i~d~~g~ 316 (499)
..++|.+++|||++++++.+.+.+.+++..+++.||+||++...+....... ....++|+|+++++++|+|++++
T Consensus 2260 -~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~ 2338 (5163)
T PRK12316 2260 -PPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILDADLN 2338 (5163)
T ss_pred -CcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEECCCCC
Confidence 3489999999999999999998887778889999999999865543322211 12257999999999999999999
Q ss_pred CCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCC-CccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 317 PYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYK-GMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 317 ~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
+++.|. +|||+| +++...+ ++.+++.+...|...+... +.+||+|||+|++++||+|+++||.||+||++|++|
T Consensus 2339 ~vp~g~--~GEl~i~G~~v~~G--Y~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~ri 2414 (5163)
T PRK12316 2339 LLAPGM--AGELYLGGEGLARG--YLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRI 2414 (5163)
T ss_pred CCCCCC--eeEEEecchhhccc--ccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccC
Confidence 999998 699999 6554443 3445555666665555433 678999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.|||++|. .+|+|.+++|++.++. .+ +.++++|++.++...+.+++++ ++.+.|+.|+.|..++++++||+
T Consensus 2415 e~~eIE~~l~-~~~~v~~a~v~~~~~~-~~-~~l~a~v~~~~~~~~~~~~l~~----~l~~~Lp~~~vP~~~~~l~~lP~ 2487 (5163)
T PRK12316 2415 ELGEIEARLQ-AHPAVREAVVVAQDGA-SG-KQLVAYVVPDDAAEDLLAELRA----WLAARLPAYMVPAHWVVLERLPL 2487 (5163)
T ss_pred ChHHHHHHHh-hCcccceEEEEEEecC-CC-eEEEEEEEecCCCccCHHHHHH----HHHhhCchhcCcceEeeecccCC
Confidence 9999999996 8999999999988765 45 8999999988765545554444 46678999999999999999999
Q ss_pred CCCcHHHHHHHHHHH
Q 010854 475 TASNKLLRRVLRDQI 489 (499)
Q Consensus 475 t~~GKv~r~~l~~~~ 489 (499)
|++|||+|++|++..
T Consensus 2488 t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2488 NPNGKLDRKALPKPD 2502 (5163)
T ss_pred CCCCccCHhhcCCCc
Confidence 999999999997654
No 87
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7e-57 Score=540.57 Aligned_cols=452 Identities=19% Similarity=0.201 Sum_probs=364.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++++++++++++|||+++|++++|++|.++.+.+.+++++++++++|++........ .....
T Consensus 1621 v~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~---------~~~~~ 1691 (3956)
T PRK12467 1621 VGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLP---------LPDGL 1691 (3956)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCc---------cccCC
Confidence 689999999999999999999999999999999999999999999999999999999875321100 00001
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+.. . .++.... ..........++++|+++|||||||.||||+++|+++.+.+.+..
T Consensus 1692 ~~~~~~~-~--------------~~~~~~~-----~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~ 1751 (3956)
T PRK12467 1692 RSLVLDQ-E--------------DDWLEGY-----SDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQ 1751 (3956)
T ss_pred cEEEecc-c--------------cchhccC-----CCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHH
Confidence 1111110 0 0010100 011112235678999999999999999999999999999998888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC--CChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..++++++|+++...|++|..+++.++.+++.|+++++.+.. .+++.+++.|+++++|++.++|++++.|.+... ..
T Consensus 1752 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~ 1830 (3956)
T PRK12467 1752 EAYQLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QV 1830 (3956)
T ss_pred HhcCCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-cc
Confidence 888999999999999999999998899999999999998743 357899999999999999999999999987522 23
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC----CCCccccccccCCCceEEEECCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~i~d~~g 315 (499)
.+++++|.+++|||++++++.+.+.+.+++..++|.||+||++..++..... ......++|+|++++.++|+|+.+
T Consensus 1831 ~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~ 1910 (3956)
T PRK12467 1831 EHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASL 1910 (3956)
T ss_pred ccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCC
Confidence 4578999999999999999999888887778899999999998655432221 112346899999999999999999
Q ss_pred CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCC-CCccccccCceeEeecCceEEEecccCCeeeeCcee
Q 010854 316 VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIK 393 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~ 393 (499)
++++.|. +|||++ +++...+ ++.+++.+...|...|.. .+.+||+|||+|++++||+|+++||.||+||++|++
T Consensus 1911 ~~vp~G~--~GEl~i~G~~v~~G--Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~r 1986 (3956)
T PRK12467 1911 NPVPIGV--AGELYLGGVGLARG--YLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFR 1986 (3956)
T ss_pred CCCCCCC--ceEEEecccccccc--ccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEE
Confidence 9999998 599999 5554443 344556666666655554 367899999999999999999999999999999999
Q ss_pred echHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCC----HHHHHHHHHHHHHhhcCCceeeeEEEEc
Q 010854 394 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ----PDKLKMIFSKAIQSKLNPLFKVSLVKVV 469 (499)
Q Consensus 394 v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~~~~~~~~l~~~~~p~~~~~~ 469 (499)
|+|.|||++|. .+|+|.+++|++.+ ...+ +.++++|+...+...+ .....+.+++++++.|+.|++|..++++
T Consensus 1987 Iel~eIE~~l~-~~p~V~~a~vv~~~-~~~~-~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l 2063 (3956)
T PRK12467 1987 IELGEIEARLR-EQGGVREAVVIAQD-GANG-KQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFL 2063 (3956)
T ss_pred echHHHHHHHH-hCCCcceEEEEEec-CCCC-cEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhh
Confidence 99999999996 89999999999886 3344 8899999976543221 1123456777788899999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHH
Q 010854 470 PEFPRTASNKLLRRVLRDQIK 490 (499)
Q Consensus 470 ~~iP~t~~GKv~r~~l~~~~~ 490 (499)
++||+|++||++|++|++...
T Consensus 2064 ~~lP~t~~GKidr~~L~~~~~ 2084 (3956)
T PRK12467 2064 ARMPLTPNGKLDRKALPAPDA 2084 (3956)
T ss_pred hcCCCCCCCCcchhhCCCCcc
Confidence 999999999999999976543
No 88
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-55 Score=453.09 Aligned_cols=459 Identities=22% Similarity=0.263 Sum_probs=350.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++.+|+++.+.. ...........
T Consensus 70 i~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~------~~~~~~~~~~~ 143 (557)
T PRK07059 70 LAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFAT------TVQQVLAKTAV 143 (557)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHH------HHHHhhcccCC
Confidence 689999999999999999999999999999999999999999999999999999999875421 11111111111
Q ss_pred ceEEecccCCC------------------CCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010854 82 KAIVLPAIGND------------------VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEP 143 (499)
Q Consensus 82 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~p 143 (499)
........... ......++...+++++..... .........++++++++|||||||.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~P 219 (557)
T PRK07059 144 KHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVS 219 (557)
T ss_pred ceeEEecccccccccccccccccccccccccccCCCCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCC
Confidence 11111100000 000011233455555443321 11223345678999999999999999
Q ss_pred ceEEecchhhHHHhhhcce----eccCc---CCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHH
Q 010854 144 KAIPWTQLSSIRCTAEGWA----HIDLK---VGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQD 215 (499)
Q Consensus 144 k~v~~s~~~~~~~~~~~~~----~~~~~---~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~ 215 (499)
|+|+++|.++...+..... .+... ....++..+|++|.+++.. .+.++..|++.++.+...++..+++.+++
T Consensus 220 K~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 299 (557)
T PRK07059 220 KGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKK 299 (557)
T ss_pred cEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHH
Confidence 9999999998765433221 11111 2346778899999988754 77788889988887755577889999999
Q ss_pred hCCeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCc
Q 010854 216 AGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 295 (499)
Q Consensus 216 ~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~ 295 (499)
+++|.+.++|+++..+.+.....+.++++++.++.+|+.+++.+.+.+...+ ++.+++.||+||++..+..........
T Consensus 300 ~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~ 378 (557)
T PRK07059 300 YQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDATEF 378 (557)
T ss_pred hCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCCCCc
Confidence 9999999999999999988766667788999999999999999888887665 789999999999987655444333344
Q ss_pred cccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecC
Q 010854 296 FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 296 ~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 374 (499)
..++|.|+++++++++|++|++++.|+ .|||++ ++..+.+ ++.+++.+... ...++||+|||+++++++
T Consensus 379 ~~~vG~p~~g~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~~~~~------~~~~g~~~TGDl~~~~~~ 448 (557)
T PRK07059 379 SGTIGLPLPSTEVSIRDDDGNDLPLGE--PGEICIRGPQVMAG--YWNRPDETAKV------MTADGFFRTGDVGVMDER 448 (557)
T ss_pred CCcccCccCCcEEEEECCCCCCCCCCC--ceEEEEeCCccchh--hhcCHHHHhhh------cccCCceecCcEEEEcCC
Confidence 678999999999999999999999998 599999 5443332 22222222111 234679999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ 454 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~ 454 (499)
|++++.||.+|+++++|++|+|.+||+++. .+++|.+++|++.++...+ +.++++++.... ..+.+++.+ .+.
T Consensus 449 g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~-~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~~-~~~~~~l~~----~~~ 521 (557)
T PRK07059 449 GYTKIVDRKKDMILVSGFNVYPNEIEEVVA-SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKDP-ALTEEDVKA----FCK 521 (557)
T ss_pred CcEEEecccccceEECCEEEcHHHHHHHHH-hCCceeEEEEEecccCCCC-eeEEEEEEeCCC-CCCHHHHHH----HHH
Confidence 999999999999999999999999999996 8999999999999888777 888888886542 334444444 455
Q ss_pred hhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHH
Q 010854 455 SKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 488 (499)
Q Consensus 455 ~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~ 488 (499)
+.|+.+..|..+++++++|+|++||++|+.|+++
T Consensus 522 ~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 522 ERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred HhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 6889999999999999999999999999999864
No 89
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-55 Score=450.16 Aligned_cols=443 Identities=19% Similarity=0.185 Sum_probs=338.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCc
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK 82 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (499)
++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++.+|+++.... .+... . .+..
T Consensus 50 ~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~------~~~~~-~-~~~~ 121 (540)
T PRK13388 50 DRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRP------LLDGL-D-LPGV 121 (540)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhH------HHHhh-c-ccCc
Confidence 68999999999999999999999999999999999999999999999999999999875321 11111 0 1111
Q ss_pred eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce
Q 010854 83 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA 162 (499)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~ 162 (499)
..+... ...+.+++..... ........++++++++|||||||.||+|.++|+++...+.....
T Consensus 122 ~~i~~~------------~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~ 184 (540)
T PRK13388 122 RVLDVD------------TPAYAELVAAAGA-----LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE 184 (540)
T ss_pred eEEEcc------------chhhhhhhccccC-----cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH
Confidence 111110 0123333321111 01112356799999999999999999999999999888877777
Q ss_pred eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 163 HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 163 ~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
.++++.+|+++..+|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++..+|+.+..++.........
T Consensus 185 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~ 263 (540)
T PRK13388 185 RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDA 263 (540)
T ss_pred HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccc
Confidence 788999999999999999999876 566889999998875 567889999999999999999999999988764432222
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEE-----------E
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------I 310 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------i 310 (499)
...++.+ . |+.+.+.....+.+.+ +..+++.||+||++.++.... ....+++|.|++++++. +
T Consensus 264 ~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~ 337 (540)
T PRK13388 264 DNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVAR 337 (540)
T ss_pred ccceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCcccccee
Confidence 3456643 3 5556777777777665 688999999999987654332 22457899999997652 4
Q ss_pred ECCCCCCCCC-CCCcceeeEec--ccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCee
Q 010854 311 LDECGVPYPD-DQPCVGEVGLF--PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM 387 (499)
Q Consensus 311 ~d~~g~~~~~-g~~~~Gei~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i 387 (499)
+|++|+++.. +. +||+++. +..+.+ ++.+++.+...+ .++||+|||+|++|++|++++.||.+|+|
T Consensus 338 ~d~~g~~~~~~~~--~GEl~v~~g~~~~~g--Y~~~~~~t~~~~-------~~g~~~TGD~~~~~~dg~l~i~GR~~d~i 406 (540)
T PRK13388 338 FDAHGALLNADEA--IGELVNTAGAGFFEG--YYNNPEATAERM-------RHGMYWSGDLAYRDADGWIYFAGRTADWM 406 (540)
T ss_pred ccCccccccCCCc--ceEEEEecCCccccc--ccCChHHHHHHh-------hcCceeccceEEEcCCCcEEEeccCCceE
Confidence 5566665533 33 6999984 333322 222233222222 14699999999999999999999999999
Q ss_pred eeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEE
Q 010854 388 NLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVK 467 (499)
Q Consensus 388 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~ 467 (499)
|++|++|+|.+||+++. .+|+|.+++|++++++..| +.+++++++.++...+.+++.+++++ ...|+.|+.|..++
T Consensus 407 ~~~G~~v~p~eIE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~l~~--~~~l~~~~~P~~~~ 482 (540)
T PRK13388 407 RVDGENLSAAPIERILL-RHPAINRVAVYAVPDERVG-DQVMAALVLRDGATFDPDAFAAFLAA--QPDLGTKAWPRYVR 482 (540)
T ss_pred EECCEEeCHHHHHHHHH-hCCCceEEEEEEccCCCCC-ceeEEEEEECCCCcCCHHHHHHHHHh--hccCCcccCCcEEE
Confidence 99999999999999996 8999999999999988777 77888888877766666677766543 13699999999999
Q ss_pred EcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 468 VVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 468 ~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++++||+|++||++|++|+++....
T Consensus 483 ~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 483 IAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred EeccCCCCCcceeeHHhHHHhccCC
Confidence 9999999999999999999876543
No 90
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-55 Score=454.34 Aligned_cols=464 Identities=19% Similarity=0.214 Sum_probs=350.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|++|..+..++.+++++++++++++++... +.+.+.......
T Consensus 80 ~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~ 153 (567)
T PRK06178 80 VGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSL 153 (567)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCc
Confidence 67999999999999999999999999999999999999999999999999999999987532 122222222212
Q ss_pred ceEEecccCCCCCC----CCC-------cCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecc
Q 010854 82 KAIVLPAIGNDVGI----PLR-------EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ 150 (499)
Q Consensus 82 ~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~ 150 (499)
..++.......... ... .....+.++...... ...........++++++++|||||||.||+|+++|
T Consensus 154 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~ 231 (567)
T PRK06178 154 RHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQ 231 (567)
T ss_pred ceEEEeccccccccccccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEecc
Confidence 22221110000000 000 001122223222111 01111223356799999999999999999999999
Q ss_pred hhhHHHhhhcce-eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHH
Q 010854 151 LSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLV 228 (499)
Q Consensus 151 ~~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l 228 (499)
.++......... ...++.+|+++.++|++|.+|+.. ++.+++.|+++++.+ .+++..+++.++++++|.+.++|..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~ 310 (567)
T PRK06178 232 RDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNA 310 (567)
T ss_pred HHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHH
Confidence 998876554432 256788999999999999999864 888999999999987 56789999999999999999999999
Q ss_pred HHHHccCCCCcccccceeEEEee--cCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC------CCcccccc
Q 010854 229 KAWRNTNCLEGLDWTKIRSFAST--GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFS 300 (499)
Q Consensus 229 ~~l~~~~~~~~~~l~~l~~i~~~--G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~------~~~~~~~g 300 (499)
..+.........++++++.+..+ ++.++++..+.+...+....+.+.||+||++.......... .....++|
T Consensus 311 ~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG 390 (567)
T PRK06178 311 VELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVG 390 (567)
T ss_pred HHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccc
Confidence 99987765556667788876544 58889998888887764333445899999875433222111 12346789
Q ss_pred ccCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEE
Q 010854 301 TATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYII 378 (499)
Q Consensus 301 ~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~ 378 (499)
.|+||++++++| +++.+++.|+ +||+++ ++..+.+ ++.+++.+...+ .++||+|||+++++++|+++
T Consensus 391 ~p~~g~~v~v~d~~~~~~~~~g~--~Gel~v~g~~v~~g--Y~~~~~~~~~~~-------~dg~~~TGDl~~~~~~g~l~ 459 (567)
T PRK06178 391 LPVPGTEFKICDFETGELLPLGA--EGEIVVRTPSLLKG--YWNKPEATAEAL-------RDGWLHTGDIGKIDEQGFLH 459 (567)
T ss_pred cccCCcEEEEEcCCCCCcCCCCC--ceEEEEECCccccc--ccCChhhhhhcc-------cCCceeecceEEEecCCeEE
Confidence 999999999999 7899999998 599999 5544432 222222222222 14699999999999999999
Q ss_pred EecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcC
Q 010854 379 VQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLN 458 (499)
Q Consensus 379 ~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~ 458 (499)
++||.+|+|+++|.+|+|.+||+++. .+++|.++++++.+++..+ +.++++|++.++...+.+++.+. +++.++
T Consensus 460 i~GR~~d~i~~~G~~i~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~l~ 533 (567)
T PRK06178 460 YLGRRKEMLKVNGMSVFPSEVEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKPGADLTAAALQAW----CRENMA 533 (567)
T ss_pred EEecccccEEECCEEECHHHHHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCCCCcCCHHHHHHH----HHhcCc
Confidence 99999999999999999999999996 8999999999999887777 88899999887665566555554 556889
Q ss_pred CceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 459 PLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 459 ~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
.|+.|. +++++++|+|++||++|++|++++++.
T Consensus 534 ~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 534 VYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred ccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 999996 888999999999999999999988653
No 91
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-55 Score=448.28 Aligned_cols=447 Identities=20% Similarity=0.177 Sum_probs=340.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++++++.+++++++++.+++++.... ..... .....
T Consensus 46 v~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~-~~~~~ 118 (501)
T PRK13390 46 LRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDG------LAAKV-GADLP 118 (501)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhh------HHHHh-hhccc
Confidence 689999999999999999999999999999999999999999999999999999999764210 00000 00000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec--chhhHHHh--
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSIRCT-- 157 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s--~~~~~~~~-- 157 (499)
..+.+. .. .....++++....... .....++.++++|||||||.||+|+++ |.++....
T Consensus 119 ~~~~~~--~~------~~~~~~~~~~~~~~~~---------~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~ 181 (501)
T PRK13390 119 LRLSFG--GE------IDGFGSFEAALAGAGP---------RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDP 181 (501)
T ss_pred eEEEec--Cc------ccccccHHHHhcccCC---------CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhh
Confidence 111111 00 0112233333221100 011223579999999999999999964 44443321
Q ss_pred --hhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccC
Q 010854 158 --AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN 235 (499)
Q Consensus 158 --~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 235 (499)
......+.+..+++++..+|++|.+++...+..+..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 260 (501)
T PRK13390 182 IVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLD 260 (501)
T ss_pred hHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhcc
Confidence 11123457888999999999999998765445567899998876 467899999999999999999999999998754
Q ss_pred CC--CcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECC
Q 010854 236 CL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE 313 (499)
Q Consensus 236 ~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~ 313 (499)
.. ...+++++|.++.+|+++++++.+.+.+.+ +..+++.||+||++.++...........+++|.|.++ .++|+|+
T Consensus 261 ~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~ 338 (501)
T PRK13390 261 ADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDD 338 (501)
T ss_pred chhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECC
Confidence 32 345678999999999999999988887765 6789999999999865443332223345789999999 7999999
Q ss_pred CCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCce
Q 010854 314 CGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGI 392 (499)
Q Consensus 314 ~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~ 392 (499)
++++++.|+ .|||++ ++..+.+ ++.+++.+...+.. .+++|++|||++++|++|++++.||.||+++++|+
T Consensus 339 ~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~t~~~~~~----~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~ 410 (501)
T PRK13390 339 DGNELPAGR--IGTVYFERDRLPFR--YLNDPEKTAAAQHP----AHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGV 410 (501)
T ss_pred CCCCCCCCC--ceEEEEecCCcccc--ccCChhhhHHhhcc----CCCceEEcCceEEECCCCeEEEeeccccceeECCe
Confidence 999999999 599999 4443332 22233333322211 23579999999999999999999999999999999
Q ss_pred eechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCC
Q 010854 393 KTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEF 472 (499)
Q Consensus 393 ~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~i 472 (499)
+|+|.+||+++. .+|+|.++++++++++..+ +.+++++++..+...+ +++.+.+.+++..+|+.|+.|..++++++|
T Consensus 411 ~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~~-e~~~~~v~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~~~~~~~i 487 (501)
T PRK13390 411 NIYPQETENALT-MHPAVHDVAVIGVPDPEMG-EQVKAVIQLVEGIRGS-DELARELIDYTRSRIAHYKAPRSVEFVDEL 487 (501)
T ss_pred eeCHHHHHHHHH-hCCCeeEEEEEeccCcccC-ceeEEEEEecCCCCcc-hhhHHHHHHHHHHhcccCCCCcEEEEeccC
Confidence 999999999996 8999999999999998877 8899999887654333 234456777788899999999999999999
Q ss_pred CCCCCcHHHHHHHH
Q 010854 473 PRTASNKLLRRVLR 486 (499)
Q Consensus 473 P~t~~GKv~r~~l~ 486 (499)
|+|++||++|++|+
T Consensus 488 P~t~~GKi~r~~L~ 501 (501)
T PRK13390 488 PRTPTGKLVKGLLR 501 (501)
T ss_pred CCCCccceehhhcC
Confidence 99999999999874
No 92
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-55 Score=451.83 Aligned_cols=464 Identities=23% Similarity=0.278 Sum_probs=352.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.++++.++++.+++++....... ........
T Consensus 71 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~~~~~~~~ 144 (563)
T PRK06710 71 VEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVT------NVQSATKI 144 (563)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhh------ccchhhcc
Confidence 679999999999999999999999999999999999999999999999999999999875422111 11110011
Q ss_pred ceEEecccCCCCCCC--------------------CCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010854 82 KAIVLPAIGNDVGIP--------------------LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 141 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG 141 (499)
..+++.........+ .......|..+.... ...........+++++++|||||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGTTG 219 (563)
T PRK06710 145 EHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEV-----NTGVEVPCDPENDLALLQYTGGTTG 219 (563)
T ss_pred ceeEEeccccccccccccccchhhcccccccccccccchhhhhhhhhhcc-----ccccccccCCCCCEEEEEcCCCCCC
Confidence 111111000000000 000000111111100 0011111133579999999999999
Q ss_pred CCceEEecchhhHHHhhhcce-eccCc-CCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCC
Q 010854 142 EPKAIPWTQLSSIRCTAEGWA-HIDLK-VGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGV 218 (499)
Q Consensus 142 ~pk~v~~s~~~~~~~~~~~~~-~~~~~-~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~ 218 (499)
.||+|.++|+++...+..... .++.. .++++++++|++|.+++.. ++.+++.|+++++.+ .+++..+++.|+++++
T Consensus 220 ~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~ 298 (563)
T PRK06710 220 FPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKV 298 (563)
T ss_pred CCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCC
Confidence 999999999998755432222 23333 3457889999999998865 667889999999876 4678899999999999
Q ss_pred eEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccc
Q 010854 219 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGA 298 (499)
Q Consensus 219 t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~ 298 (499)
|++.++|+++..+++.......+++++|.++++|+++++++..++...+ +..+++.||+||++..............++
T Consensus 299 t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 377 (563)
T PRK06710 299 TLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGS 377 (563)
T ss_pred eEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCc
Confidence 9999999999999887665566778999999999999999998887665 788999999999987554333323334578
Q ss_pred ccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCce
Q 010854 299 FSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGY 376 (499)
Q Consensus 299 ~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~ 376 (499)
+|+|.+++.++++| +++.+++.|+ .|||++ ++..+.+ ++.+++.+...+ .++||+|||+++++++|+
T Consensus 378 ~G~~~~~~~~~i~~~~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~~~~~~-------~~g~~~TGD~~~~~~~g~ 446 (563)
T PRK06710 378 IGVPWPDTEAMIMSLETGEALPPGE--IGEIVVKGPQIMKG--YWNKPEETAAVL-------QDGWLHTGDVGYMDEDGF 446 (563)
T ss_pred cCCCCCCCeEEEEECCCCccCCCCC--ceEEEEecCccchh--hhCChHHHhhhc-------ccCcccccceEEEcCCCc
Confidence 99999999999998 7889999998 499999 5544432 222333322222 257999999999999999
Q ss_pred EEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhh
Q 010854 377 IIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK 456 (499)
Q Consensus 377 l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~ 456 (499)
+++.||.+|+|+++|.+|+|.+||+++. .+++|.+++|++.++...+ +.++++++..++...+.+++.++ +.+.
T Consensus 447 ~~~~GR~dd~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~----~~~~ 520 (563)
T PRK06710 447 FYVKDRKKDMIVASGFNVYPREVEEVLY-EHEKVQEVVTIGVPDPYRG-ETVKAFVVLKEGTECSEEELNQF----ARKY 520 (563)
T ss_pred EEEeeccccEEEECCEEECHHHHHHHHH-hCcceeeEEEEccccCCcC-ceeEEEEEECCCCCCCHHHHHHH----HHHh
Confidence 9999999999999999999999999996 8999999999999988777 88899999887665566555555 5567
Q ss_pred cCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhhh
Q 010854 457 LNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 457 l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
|+.|+.|..+.++++||+|++||++|+.|+++++.+-+.
T Consensus 521 l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 521 LAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred cccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 899999999999999999999999999999988765443
No 93
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-54 Score=446.05 Aligned_cols=464 Identities=19% Similarity=0.163 Sum_probs=350.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++.+++++... ..+..+....+.
T Consensus 50 ~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 123 (533)
T PRK07798 50 LGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPK 123 (533)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCC
Confidence 68899999999999999999999999999999999999999999999999999999987432 222222222222
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++...... ......+..++++++..... ...... ..++.++++|||||||.||+|+++|+++........
T Consensus 124 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~ 196 (533)
T PRK07798 124 LRTLVVVEDGS-GNDLLPGAVDYEDALAAGSP-----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGR 196 (533)
T ss_pred ccEEEEecCCc-ccccCCccccHHHHHhccCC-----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhh
Confidence 22222221111 11112245567777654332 111111 223457899999999999999999999876544321
Q ss_pred e---------eccC------cCCcEEEeecCccccchhhhhhhhhccCcEEEecCC-CCChhHHHHHHHHhCCeEEecch
Q 010854 162 A---------HIDL------KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 162 ~---------~~~~------~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
. ...+ ..+++++..+|++|.+++..++.+++.|+++++.+. ..++..+++.++++++|.+.++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~ 276 (533)
T PRK07798 197 DFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVG 276 (533)
T ss_pred hhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEech
Confidence 1 1111 567889999999999999889999999999999873 45678999999999999999998
Q ss_pred HHHHH-HHccCC-CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccccc--c
Q 010854 226 SLVKA-WRNTNC-LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--T 301 (499)
Q Consensus 226 ~~l~~-l~~~~~-~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g--~ 301 (499)
+.+.. +..... ....++++++.++++|+.+++++..++...+++..+++.||+||++........... ...| .
T Consensus 277 ~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~g~~~ 353 (533)
T PRK07798 277 DAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKGA---VHTGGPR 353 (533)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCCC---ccCCCCc
Confidence 75533 333322 334567899999999999999999999888777889999999998754443322111 2233 6
Q ss_pred cCCCceEEEECCCCCCCCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEec
Q 010854 302 ATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQG 381 (499)
Q Consensus 302 ~~~~~~~~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~g 381 (499)
+.++..++++|+++++++.|+.+.|+++.++..+.+ ++.++..+...|. ...+.+||+|||++++|++|++++.|
T Consensus 354 ~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~~~g--y~~~~~~t~~~f~---~~~~~~~~~TGD~~~~~~~g~l~~~G 428 (533)
T PRK07798 354 FTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHIPLG--YYKDPEKTAETFP---TIDGVRYAIPGDRARVEADGTITLLG 428 (533)
T ss_pred cCCCceEEEECCCCCCCCCCCCCeeEEEeecCcccc--ccCChhhhHHhhc---cCCCCceEEcCcEEEEcCCCcEEEEc
Confidence 788999999999999999888534777765433322 2223333322222 13456799999999999999999999
Q ss_pred ccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCce
Q 010854 382 RADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLF 461 (499)
Q Consensus 382 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 461 (499)
|.+|+++.+|.+|+|.+||+++. .+++|.++++++.++...+ +.+.+++++.++...+.+++.++ +++.|+.|+
T Consensus 429 R~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~----l~~~l~~~~ 502 (533)
T PRK07798 429 RGSVCINTGGEKVFPEEVEEALK-AHPDVADALVVGVPDERWG-QEVVAVVQLREGARPDLAELRAH----CRSSLAGYK 502 (533)
T ss_pred cccceEecCCEEeCHHHHHHHHH-hCccceeEEEEeccCcccC-ceEEEEEEECCCCCCCHHHHHHH----HhhhcccCC
Confidence 99999999999999999999996 8999999999999887777 88888998887665566555555 556788999
Q ss_pred eeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 462 KVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 462 ~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+|..++++++||+|++||++|+.|+++++++
T Consensus 503 ~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~~ 533 (533)
T PRK07798 503 VPRAIWFVDEVQRSPAGKADYRWAKEQAAER 533 (533)
T ss_pred CCeEEEEcccCCCCCcchhhHHHHhhhhccC
Confidence 9999999999999999999999999988764
No 94
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.6e-55 Score=458.02 Aligned_cols=457 Identities=14% Similarity=0.081 Sum_probs=334.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCC-----HHHHHHHhhcCCeeEEEecccccccCccccchhhhh
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL 76 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 76 (499)
+++||+|+++++|+++|++++|||+++|++++|+++.++ .+++.+++++++++++|+++... ....+...
T Consensus 91 v~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~- 165 (614)
T PRK08180 91 LSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA----FARALAAV- 165 (614)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH----HHHHHhhh-
Confidence 689999999999999999999999999999999999988 79999999999999999975310 00000000
Q ss_pred hcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 77 GAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
... ....+... ... ......++.++...... ...........++|+++|+|||||||.||||++||+++...
T Consensus 166 ~~~-~~~~i~~~-~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~ 237 (614)
T PRK08180 166 VPA-DVEVVAVR-GAV----PGRAATPFAALLATPPT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCAN 237 (614)
T ss_pred ccC-CceEEEec-CCC----CCcccccHHHHhccccc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHH
Confidence 011 11111111 100 01123567776653221 00011112345799999999999999999999999999888
Q ss_pred hhhcceeccCc--CCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCCh---hHHHHHHHHhCCeEEecchHHHHH
Q 010854 157 TAEGWAHIDLK--VGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 157 ~~~~~~~~~~~--~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~---~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
+......++.. .++++++++|++|.+++.. ++.+++.|+++++.+..+++ ..+++.++++++|+++++|+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~ 317 (614)
T PRK08180 238 QQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEM 317 (614)
T ss_pred HHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHH
Confidence 77665555553 5689999999999999765 88899999999987643333 467889999999999999999999
Q ss_pred HHccCCC----CcccccceeEEEeecCCCChhhHHHHHhh----cc-cCceeccccccceeeeeecCCCCCCCccccccc
Q 010854 231 WRNTNCL----EGLDWTKIRSFASTGETSNVDDDLWLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 301 (499)
Q Consensus 231 l~~~~~~----~~~~l~~l~~i~~~G~~l~~~~~~~~~~~----~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~ 301 (499)
|++.... ...+++++|.+++||+++++++.+.+.+. +. +..+++.||+||++........ .....+++|.
T Consensus 318 l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~ 396 (614)
T PRK08180 318 LVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGL 396 (614)
T ss_pred HHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccC
Confidence 8764322 23457899999999999999998888754 21 2679999999999865543332 2345689999
Q ss_pred cCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEe----ecCce
Q 010854 302 ATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR----TVGGY 376 (499)
Q Consensus 302 ~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~----~~~G~ 376 (499)
|+||++++|+|+.+ .|||+| ++..+.+ ++.+++.+...| +.++||+|||+|++ |++|+
T Consensus 397 p~pg~~v~i~d~~~---------~GEi~vrg~~v~~G--Y~~~p~~t~~~~------~~dgw~~TGDlg~~~~~~d~~g~ 459 (614)
T PRK08180 397 PAPGCEVKLVPVGG---------KLEVRVKGPNVTPG--YWRAPELTAEAF------DEEGYYRSGDAVRFVDPADPERG 459 (614)
T ss_pred ccCCcEEEEecCCC---------CcEEEEecCccchh--hcCChhHhHhhc------ccCCceeccceEEecCCcCCCCc
Confidence 99999999998522 399999 5544432 222333333222 34689999999999 46899
Q ss_pred EEEecccCCeee-eCceeec--hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCC---------------
Q 010854 377 IIVQGRADDTMN-LGGIKTS--SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------------- 438 (499)
Q Consensus 377 l~~~gR~~d~i~-~~G~~v~--~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~--------------- 438 (499)
++++||.||+++ .+|++|+ |.|+|.++. .||.|.+++|++.++ +.+.++|++.++.
T Consensus 460 l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~-~~p~V~~a~V~g~~~-----~~~~a~V~~~~~~~~~~~~~~~~~~~~~ 533 (614)
T PRK08180 460 LMFDGRIAEDFKLSSGTWVSVGPLRARAVSA-GAPLVQDVVITGHDR-----DEIGLLVFPNLDACRRLAGLLADASLAE 533 (614)
T ss_pred eEEecchhhhEEcCCCcEecchhhhHHHHhh-cCchhheEEEEcCCC-----CceEEEEEcCHHHHHHHHhhcccCCHHH
Confidence 999999999888 5798766 788889886 899999999999876 4567888876541
Q ss_pred CCCHHHHHHHHHHHHHhh----cCCceeeeEEEEcCCCCCC------CCcHHHHHHHHHHHHhhhhh
Q 010854 439 TSQPDKLKMIFSKAIQSK----LNPLFKVSLVKVVPEFPRT------ASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 439 ~~~~~~l~~~~~~~~~~~----l~~~~~p~~~~~~~~iP~t------~~GKv~r~~l~~~~~~~~~~ 495 (499)
..+.+++++++++.+.+. ...+.+|+++++++++|++ ++||+.|+++.+.|++++++
T Consensus 534 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 534 VLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred HhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHH
Confidence 123345666665554321 1223389999999999975 56689999999999998875
No 95
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-55 Score=472.13 Aligned_cols=449 Identities=16% Similarity=0.115 Sum_probs=329.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|++++++++|||+++|++++|++|. +++.+++++++++++|++..... .... ...
T Consensus 494 v~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~---------~~~~-~~~ 560 (994)
T PRK07868 494 VRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLE---------AARQ-LPG 560 (994)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHH---------HHHh-cCc
Confidence 6899999999999999999999999999999999985 68899999999999999864321 1111 112
Q ss_pred ceEEecccCC-CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 KAIVLPAIGN-DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
..+++..... ............++++..... ..+....+....++++++++|| ||||.||++.++|.++.......
T Consensus 561 ~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~ 637 (994)
T PRK07868 561 RVLVLGGGESRDLDLPDDADVIDMEKIDPDAV--ELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGT 637 (994)
T ss_pred eEEEecCCccccccCCcchhhhhhhhcCcccc--cCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhh
Confidence 2222221100 000000001111111111000 0000011112236899999998 58888888888887765554444
Q ss_pred ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
...+++..+|++++.+|++|.+++...+.+++.|++.+++...++++.+++.|+++++|++.++|++++.|++.......
T Consensus 638 ~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~ 717 (994)
T PRK07868 638 ASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLH 717 (994)
T ss_pred hhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccC
Confidence 45567889999999999999999987444444555544444467899999999999999999999999999886544445
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCc-eEEEE--------
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVIL-------- 311 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~i~-------- 311 (499)
+++++|.++. +.+++++.+.+.+.+++..+++.||+||++.... .. .....+++|+|+|++ +++|.
T Consensus 718 ~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~ 792 (994)
T PRK07868 718 GNHPVRLFIG--SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDL 792 (994)
T ss_pred CCCceEEEec--CCCCHHHHHHHHHHhCchheeeeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCc
Confidence 6778998763 3488999999988886688999999999875432 11 224567999999998 66653
Q ss_pred ---CCCC--CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCC
Q 010854 312 ---DECG--VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 385 (499)
Q Consensus 312 ---d~~g--~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d 385 (499)
|++| ++++.|+ .|||++ ++.+++ +.. .....+| ..+++||+|||+|++|+||+|+++||.||
T Consensus 793 li~d~~G~~~~~~~ge--~Gel~~~~~~~~~-p~~----t~~~~~~-----~~~dgw~~TGDlg~~d~dG~l~~~GR~dd 860 (994)
T PRK07868 793 ILEDDRGFVRRAEVNE--VGVLLARARGPID-PTA----SVKRGVF-----APADTWISTEYLFRRDDDGDYWLVDRRGS 860 (994)
T ss_pred eeecCCceEEEcCCCC--ceEEEEecCCCCC-hhh----hhHhccc-----ccCCEEEeccceEEEcCCCCEEEeccCCC
Confidence 4556 5677888 499999 444331 100 0001122 13679999999999999999999999999
Q ss_pred eeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeE
Q 010854 386 TMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSL 465 (499)
Q Consensus 386 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 465 (499)
+||++|.+|+|.|||++|. .||+|.+++|++++++. + +.++++|+++++...+.++|+++++ .++.|++|..
T Consensus 861 ~Ik~~G~~I~p~EIE~~L~-~hp~V~~aaVvg~~d~~-~-~~~~a~Vv~~~~~~~~~~~L~~~l~-----~l~~y~vP~~ 932 (994)
T PRK07868 861 VIRTARGPVYTEPVTDALG-RIGGVDLAVTYGVEVGG-R-QLAVAAVTLRPGAAITAADLTEALA-----SLPVGLGPDI 932 (994)
T ss_pred EEEeCCceEcHHHHHHHHh-cCCCeeEEEEEeecCCC-C-ceEEEEEEeCCCCcCCHHHHHHHHH-----hCCCCcCCeE
Confidence 9999999999999999996 99999999999998765 4 7889999988776667766666653 3899999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHHHHHh
Q 010854 466 VKVVPEFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 466 ~~~~~~iP~t~~GKv~r~~l~~~~~~ 491 (499)
|+++++||+|++||++|++|++....
T Consensus 933 i~~v~~lP~T~sGKi~r~~L~~~~lp 958 (994)
T PRK07868 933 VHVVPEIPLSATYRPTVSALRAAGIP 958 (994)
T ss_pred EEEeCCCCCCccccEehHHHHhcCCC
Confidence 99999999999999999999876544
No 96
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-54 Score=439.62 Aligned_cols=457 Identities=20% Similarity=0.146 Sum_probs=356.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCC-
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP- 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~- 80 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..++++++++.+|+++.... ..........
T Consensus 33 ~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~------~~~~~~~~~~~ 106 (502)
T PRK08276 33 LREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALAD------TAAELAAELPA 106 (502)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhh------HHHHHhhhccc
Confidence 689999999999999999999999999999999999999999999999999999999875431 1111111111
Q ss_pred CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHh---
Q 010854 81 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--- 157 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~--- 157 (499)
....+...... ......+.+....... ......++.++++|||||||.||+|.++|.++....
T Consensus 107 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~ 172 (502)
T PRK08276 107 GVPLLLVVAGP------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPG 172 (502)
T ss_pred cccEEEEeCCC------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECCCCCCCCceEEEccCCcchhhhhH
Confidence 11111111110 1223345544332111 111245778999999999999999999987654322
Q ss_pred ---hhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHcc
Q 010854 158 ---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 234 (499)
Q Consensus 158 ---~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 234 (499)
...........+++++++.|++|.+++...+.++..|+++++.+ ..++..+++.++++++|++.++|+++..+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 251 (502)
T PRK08276 173 MMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALALIERYRVTHSQLVPTMFVRMLKL 251 (502)
T ss_pred HhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhC
Confidence 22222223356788999999999999887778999999998876 46789999999999999999999999999876
Q ss_pred CC--CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC
Q 010854 235 NC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 312 (499)
Q Consensus 235 ~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d 312 (499)
.. ....+++++|.++++|++++.++.+++.+.+ +..+++.||+||++.++...........+++|.|+ ++.++++|
T Consensus 252 ~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d 329 (502)
T PRK08276 252 PEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD 329 (502)
T ss_pred ccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC
Confidence 54 2345788999999999999999999988766 67799999999998755444333334557899999 88999999
Q ss_pred CCCCCCCCCCCcceeeEec-ccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCc
Q 010854 313 ECGVPYPDDQPCVGEVGLF-PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGG 391 (499)
Q Consensus 313 ~~g~~~~~g~~~~Gei~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G 391 (499)
+++.+++.|+ .||+++. +.... .++.++..+...+ ..++||+|||+++++++|.+++.||.||+++++|
T Consensus 330 ~~~~~~~~g~--~Gel~v~~~~~~~--gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G 399 (502)
T PRK08276 330 EDGNELPPGE--IGTVYFEMDGYPF--EYHNDPEKTAAAR------NPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGG 399 (502)
T ss_pred CCCCCCcCCC--ceEEEEECCCccc--hhcCCHHHHHHHh------cCCCceeecceEEEcCCcCEEEeccCcceEEeCC
Confidence 9999999998 5999994 44432 2333333333222 2347999999999999999999999999999999
Q ss_pred eeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCC
Q 010854 392 IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 471 (499)
Q Consensus 392 ~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~ 471 (499)
.+|+|.+||.++. .+|+|.++++++..++..+ +.++++|++.++...+ +++.+.+.+.++++|+.++.|..++++++
T Consensus 400 ~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~~~~ 476 (502)
T PRK08276 400 VNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPADGADAG-DALAAELIAWLRGRLAHYKCPRSIDFEDE 476 (502)
T ss_pred EEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECCCCCCC-hhhHHHHHHHHHhhccCCCCCcEEEEecC
Confidence 9999999999997 8999999999999988777 8999999988754433 34455677778889999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhhh
Q 010854 472 FPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 472 iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
+|+|++||++|+.|++.+.+..+
T Consensus 477 lP~t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 477 LPRTPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred CCCCcccchhHHHHHHHHHhhhh
Confidence 99999999999999998766543
No 97
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-55 Score=426.52 Aligned_cols=466 Identities=18% Similarity=0.164 Sum_probs=356.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc--C
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--A 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--~ 79 (499)
+++++.|+|+.-|++||+++.+||...|++.|||+..++++.+.++++++.+++++++++ .+...+.+.... .
T Consensus 130 ~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~-----~k~~~ll~~~~~~~~ 204 (691)
T KOG1256|consen 130 VKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNA-----KKAEKLLEIKENDSL 204 (691)
T ss_pred CCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCH-----HHHHHHHhhcccccC
Confidence 568999999999999999999999999999999999999999999999999999999964 222333333332 3
Q ss_pred C-CceEEecccCCC----CCCCCCcCCCCHHHHhcccCCCCCCCCCCC-CCCCCCCeEEEEecCCCCCCCceEEecchhh
Q 010854 80 P-LKAIVLPAIGND----VGIPLREQDLSWKDFLSSVDYHPRPNYYSP-VYNPVDAVVNILFSSGTTGEPKAIPWTQLSS 153 (499)
Q Consensus 80 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~ 153 (499)
+ .+.++....... ..........+|++++..+.. ....+ ....+||+|.|+|||||||.||||++||+|+
T Consensus 205 ~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~----~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Ni 280 (691)
T KOG1256|consen 205 PSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGKK----NQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNI 280 (691)
T ss_pred ccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhccc----ccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccce
Confidence 3 344444333221 111223447899999998864 22222 4778999999999999999999999999999
Q ss_pred HHHhhhcce------eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHH
Q 010854 154 IRCTAEGWA------HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 154 ~~~~~~~~~------~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
...++.... .......|++++++|+.|++.-+.-...++.|+.+.+..+ ++..+.+.++..+||.+.++|..
T Consensus 281 v~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRV 358 (691)
T KOG1256|consen 281 VSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRV 358 (691)
T ss_pred eehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhH
Confidence 886543221 1123346999999999999998875556699999999974 56778888999999999999999
Q ss_pred HHHHHcc-----------------------C---CCCccc-------------------ccceeEEEeecCCCChhhHHH
Q 010854 228 VKAWRNT-----------------------N---CLEGLD-------------------WTKIRSFASTGETSNVDDDLW 262 (499)
Q Consensus 228 l~~l~~~-----------------------~---~~~~~~-------------------l~~l~~i~~~G~~l~~~~~~~ 262 (499)
|+++-+. . ...+.. ..++|.+++|++++++++..+
T Consensus 359 l~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F 438 (691)
T KOG1256|consen 359 LERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTF 438 (691)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHH
Confidence 9877443 0 000000 246899999999999999999
Q ss_pred HHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccc
Q 010854 263 LSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDR 340 (499)
Q Consensus 263 ~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~ 340 (499)
++..+ ++.+++.||+||+++..+...+... ..+++|.|+|+++++++| ++......+.. ||||| ++..+.+ +
T Consensus 439 ~r~~~-g~~v~eGYGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~G--Y 512 (691)
T KOG1256|consen 439 FRAAL-GCRVLEGYGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMG--Y 512 (691)
T ss_pred HHHhc-CceeeecccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhcee--c
Confidence 99775 7999999999999966666655555 789999999999999998 55555555553 99999 7877764 5
Q ss_pred cccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEeC
Q 010854 341 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVS 419 (499)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~ 419 (499)
+++++.+...+ +.+||+||||+|+|+++|.|.+.||.|+++|. .|++|.|+.||++.. ..+-|...+|.+-+
T Consensus 513 yK~p~~T~e~i------deDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~~V~qi~V~g~s 585 (691)
T KOG1256|consen 513 YKDPEKTAEAI------DEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSLPVQQIFVLGDS 585 (691)
T ss_pred cCChHHHhhhh------ccccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHh-cCCceEEEEEECCc
Confidence 56666665555 57899999999999999999999999999995 899999999999996 77778888877654
Q ss_pred CCCCCceEEEEEEEecCCCCC----------CHHH----------HHHHHHHHH-HhhcCCceeeeEEEEcC---CCC--
Q 010854 420 PAGGGPEVLVIFVVLKKGFTS----------QPDK----------LKMIFSKAI-QSKLNPLFKVSLVKVVP---EFP-- 473 (499)
Q Consensus 420 ~~~~~~~~~~~~v~~~~~~~~----------~~~~----------l~~~~~~~~-~~~l~~~~~p~~~~~~~---~iP-- 473 (499)
.. ..++++|++++.... +-++ +...+.+.. .++|..++....|.+.+ ++.
T Consensus 586 ~~----~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~Fsieng 661 (691)
T KOG1256|consen 586 LR----SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENG 661 (691)
T ss_pred ch----hcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCC
Confidence 32 678999998753211 0011 111222211 34677778787777754 222
Q ss_pred -CCCCcHHHHHHHHHHHHhhhhh
Q 010854 474 -RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 474 -~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
+||+-|+.|..+.+.|++++++
T Consensus 662 lltPTlK~KR~~l~~~yk~~Id~ 684 (691)
T KOG1256|consen 662 LLTPTLKIKRPQLLKYYKKQIDE 684 (691)
T ss_pred ccchhhhhhhHHHHHHHHHHHHH
Confidence 5999999999999999999986
No 98
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.9e-55 Score=435.99 Aligned_cols=450 Identities=21% Similarity=0.193 Sum_probs=336.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|++.|+++|+++.+||+.+|++.||+++..+++++.++|+++++++++++...+ .+.........+.
T Consensus 67 ~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~-----~~~~~~~~~~~~~ 141 (613)
T COG1022 67 IPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQEL-----LDLVLPVLEDCPK 141 (613)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHH-----HHHHHhhhccccc
Confidence 34599999999999999999999999999999999999999999999999999999998532 1111212221111
Q ss_pred ceEEecccC---C-------CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecch
Q 010854 82 KAIVLPAIG---N-------DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQL 151 (499)
Q Consensus 82 ~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~ 151 (499)
......... . ........+...+ . ..... .........+||+|.|+|||||||.||||++||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~ 214 (613)
T COG1022 142 VVDLIVIIDLVREAVEAKALVLEVFPDEGISLF-L-IDSAG-----LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHR 214 (613)
T ss_pred hhhhhhhhhhhhhccchhhccccccccccchhh-h-hcccc-----cccccCCCCccceEEEEEcCCCCCCCceEEEehH
Confidence 000000000 0 0000000111111 0 11110 1111245778999999999999999999999999
Q ss_pred hhHHHhhhcceecc-CcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHH
Q 010854 152 SSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVK 229 (499)
Q Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~ 229 (499)
|+++++......+. .+++|++++++|+.|++.... ....++.|+++... .+++.++..++.++||++.++|..|+
T Consensus 215 N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~---~~~~~~~~dl~~~rPt~m~~VPRvwE 291 (613)
T COG1022 215 NLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK---EDPRTLLEDLKEVRPTVMIGVPRVWE 291 (613)
T ss_pred HHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec---CCHHHHHHHHHHhCCeEEeechHHHH
Confidence 99999999999986 999999999999999999876 55555555555554 36789999999999999999999998
Q ss_pred HHHcc--------CCC-----------------------C----------------cccc-cceeEEEeecCCCChhhHH
Q 010854 230 AWRNT--------NCL-----------------------E----------------GLDW-TKIRSFASTGETSNVDDDL 261 (499)
Q Consensus 230 ~l~~~--------~~~-----------------------~----------------~~~l-~~l~~i~~~G~~l~~~~~~ 261 (499)
.+.+. ... . ...+ .++|.+++||+++++++..
T Consensus 292 ~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~ 371 (613)
T COG1022 292 KVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLH 371 (613)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHH
Confidence 76443 000 0 0011 4899999999999999999
Q ss_pred HHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccc
Q 010854 262 WLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDR 340 (499)
Q Consensus 262 ~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~ 340 (499)
+++.. ++++++.||+||+++..+.+++. ....+++|.|+|+++++|.|+ |||+| ++..+.+ +
T Consensus 372 f~~~l--Gi~i~eGYGlTEts~~~~v~~~~-~~~~gtvG~p~p~~evKI~d~------------GEilVRG~~Vm~G--Y 434 (613)
T COG1022 372 FFRSL--GIPILEGYGLTETSAVVSVNPPD-RFVLGTVGKPLPGIEVKIADD------------GEILVRGPNVMKG--Y 434 (613)
T ss_pred HHHHc--CCCeEEEecccccccceEEcccc-CcccCCcCCcCCCceEEEccC------------ceEEEecchhcch--h
Confidence 99865 79999999999999887776654 446689999999999999993 99999 8888875 5
Q ss_pred cccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeee-eCceeechHHHHHHHhhcCccceeeeEEEeC
Q 010854 341 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILETAAISVS 419 (499)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~ 419 (499)
+++++.+...| +.+|||+|||+|.+|++|+|.++||.||+|+ .+|++|.|+.||+.+. .+|.|..++|++ +
T Consensus 435 yk~pe~Taeaf------~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~-~~~~I~qi~vvg-~ 506 (613)
T COG1022 435 YKNPEATAEAF------TEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLA-KSPLIEQICVVG-D 506 (613)
T ss_pred cCChHHHhhhc------cccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHh-cCCCeeEEEEEe-c
Confidence 66677666666 4589999999999999999999999999999 5999999999999995 999999999998 3
Q ss_pred CCCCCceEEEEEEEecCCCC------------CCH------HHHHHHHHHHH---HhhcCCceeeeEEEEcC-CCC----
Q 010854 420 PAGGGPEVLVIFVVLKKGFT------------SQP------DKLKMIFSKAI---QSKLNPLFKVSLVKVVP-EFP---- 473 (499)
Q Consensus 420 ~~~~~~~~~~~~v~~~~~~~------------~~~------~~l~~~~~~~~---~~~l~~~~~p~~~~~~~-~iP---- 473 (499)
+. ..+.|.|++..+.- .+. .++.+.+...+ +..+..+..+..+.+.+ ++.
T Consensus 507 ~k----~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~ 582 (613)
T COG1022 507 DK----KFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENG 582 (613)
T ss_pred CC----cceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccC
Confidence 22 67888888875211 112 22333333333 33445556666666653 333
Q ss_pred -CCCCcHHHHHHHHHHHHhhhhh
Q 010854 474 -RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 474 -~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
.|++-|+.|..+.+.++++++.
T Consensus 583 ~~t~t~klkR~~i~~~~~~~i~~ 605 (613)
T COG1022 583 ELTPTLKLKRHVILDRYKDEIEA 605 (613)
T ss_pred ccccchhhhHHHHHHhhhhHHHH
Confidence 5899999999999999887764
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-54 Score=443.86 Aligned_cols=464 Identities=21% Similarity=0.231 Sum_probs=352.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|++|..+.+++.+++++++++.+++++... ..+..+......
T Consensus 71 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 144 (560)
T PRK08974 71 LKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPV 144 (560)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCc
Confidence 67899999999999999999999999999999999999999999999999999999976432 111221111111
Q ss_pred ceEEecccCCCCC-------------------CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010854 82 KAIVLPAIGNDVG-------------------IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGE 142 (499)
Q Consensus 82 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 142 (499)
..++......... ....+...++.+....... ..........+++++++|||||||.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~ 220 (560)
T PRK08974 145 KHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGV 220 (560)
T ss_pred ceEEEecccccccccccccccchhhhcccccccccCCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCC
Confidence 1111110000000 0000111222222222111 1111223467899999999999999
Q ss_pred CceEEecchhhHHHhhhcceec---cCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCC
Q 010854 143 PKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGV 218 (499)
Q Consensus 143 pk~v~~s~~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~ 218 (499)
||+|.++|.++..++......+ ....++.++..+|++|.+++.. ++.++..|+++++.....+...+++.++++++
T Consensus 221 PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~ 300 (560)
T PRK08974 221 AKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPF 300 (560)
T ss_pred CcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCc
Confidence 9999999999887654432222 2345667888999999988754 77788899998877655567889999999999
Q ss_pred eEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccc
Q 010854 219 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGA 298 (499)
Q Consensus 219 t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~ 298 (499)
|.+.++|++++.|.........+++++|.++++|+++++.+...++..+ +..+++.||+||++..+..+........++
T Consensus 301 t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 379 (560)
T PRK08974 301 TAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGS 379 (560)
T ss_pred ceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCc
Confidence 9999999999999887655566678999999999999999888887654 788999999999987666554444445678
Q ss_pred ccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceE
Q 010854 299 FSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYI 377 (499)
Q Consensus 299 ~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l 377 (499)
+|.|+|++.++|+|+++++++.|+ +|||++ ++....+ ++.+++.+...+ .++||+|||+++++++|++
T Consensus 380 ~G~~~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~l 448 (560)
T PRK08974 380 IGLPVPSTEIKLVDDDGNEVPPGE--PGELWVKGPQVMLG--YWQRPEATDEVI-------KDGWLATGDIAVMDEEGFL 448 (560)
T ss_pred cccCcCCCEEEEECCCCCCCCCCC--ceEEEEecCCcchh--hcCChhhhhhhh-------hcCCcccCCEEEEcCCceE
Confidence 999999999999999999999998 599999 4443332 222222222222 2479999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 010854 378 IVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 378 ~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l 457 (499)
++.||.+|+++++|.+++|.+||+++. .+++|.+++|++.+++..+ +.++++++... ...+.+++.+ ++.+.|
T Consensus 449 ~i~GR~~d~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~-~~~~~~~l~~----~l~~~l 521 (560)
T PRK08974 449 RIVDRKKDMILVSGFNVYPNEIEDVVM-LHPKVLEVAAVGVPSEVSG-EAVKIFVVKKD-PSLTEEELIT----HCRRHL 521 (560)
T ss_pred EEEecccceEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeeecCCcc-eEEEEEEECCC-CCCCHHHHHH----HHHhhc
Confidence 999999999999999999999999996 8999999999999988777 77777776543 2334444444 456688
Q ss_pred CCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhh
Q 010854 458 NPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 458 ~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
+.|+.|..++++++||+|++||++|+.|++.+..+..
T Consensus 522 ~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 558 (560)
T PRK08974 522 TGYKVPKLVEFRDELPKSNVGKILRRELRDEARAKVD 558 (560)
T ss_pred ccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhhhc
Confidence 8999999999999999999999999999998877654
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.1e-54 Score=483.09 Aligned_cols=458 Identities=16% Similarity=0.143 Sum_probs=350.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+|+..+++++.+++++++++.+|+++....... .....+..+.
T Consensus 679 ~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~ 754 (1140)
T PRK06814 679 TPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKAR----LGPLIEALEF 754 (1140)
T ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhc----chhHHHHhcc
Confidence 689999999999999999999999999999999999999999999999999999999875432111 0111111111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
...++..++.. .....++.+...... ..+. .......++|+++++|||||||.||+|+++|+++........
T Consensus 755 ~~~~i~~~~~~------~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~ 826 (1140)
T PRK06814 755 GIRIIYLEDVR------AQIGLADKIKGLLAG-RFPL-VYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVA 826 (1140)
T ss_pred CceEEEehHhh------ccCChHHHHHHHhhc-cCCc-cccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHH
Confidence 11111111100 001111111110000 0000 001134679999999999999999999999999998888877
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..++++++|++++.+|++|.+++.. ++.++..|+++++.+.....+.+.+.++++++|++.++|++++.+.+.. ...
T Consensus 827 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~ 904 (1140)
T PRK06814 827 ARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPY 904 (1140)
T ss_pred HhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccc
Confidence 7888999999999999999999854 8889999999999875556677889999999999999999999987753 345
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++........ .....+++|+|.|++++++.+..+ .
T Consensus 905 ~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~~----~ 978 (1140)
T PRK06814 905 DFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVPG----I 978 (1140)
T ss_pred cccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecCC----C
Confidence 678999999999999999998888776 7889999999999876544332 234567899999999999987543 2
Q ss_pred CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHH
Q 010854 321 DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 399 (499)
Q Consensus 321 g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~i 399 (499)
++ .||+++ ++..+.++. .+.+ .. .+ ....++||+|||++++|+||++++.||.||+||++|++|+|.||
T Consensus 979 ~~--~Gel~v~g~~~~~gY~--~~~~-~~-~~----~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eI 1048 (1140)
T PRK06814 979 DE--GGRLFVRGPNVMLGYL--RAEN-PG-VL----EPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAV 1048 (1140)
T ss_pred CC--ceEEEEeCCCcchhhc--CCCC-CC-cc----ccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHH
Confidence 44 499999 555443321 1110 00 01 01246899999999999999999999999999999999999999
Q ss_pred HHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcH
Q 010854 400 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 479 (499)
Q Consensus 400 E~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GK 479 (499)
|+++. .|+.+.+++|++++++..+ +.+++++.. ...+.+++.+++++ ..++.|+.|..+++++++|+|++||
T Consensus 1049 E~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~~~~---~~~~~~~l~~~~~~---~~l~~~~~P~~i~~v~~lP~t~~GK 1120 (1140)
T PRK06814 1049 EELAA-ELWPDALHAAVSIPDARKG-ERIILLTTA---SDATRAAFLAHAKA---AGASELMVPAEIITIDEIPLLGTGK 1120 (1140)
T ss_pred HHHHH-hcCCcccEEEEEcccCCCC-ceEEEEEcC---CCcCHHHHHHHHHH---cCCCcccCCcEEEEecCcCCCCCCC
Confidence 99996 8999999999999988887 777766542 23345555555432 3599999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcc
Q 010854 480 LLRRVLRDQIKHELSVRS 497 (499)
Q Consensus 480 v~r~~l~~~~~~~~~~~~ 497 (499)
++|++|++++.+....+.
T Consensus 1121 i~r~~L~~~~~~~~~~~~ 1138 (1140)
T PRK06814 1121 IDYVAVTKLAEEAAAKPE 1138 (1140)
T ss_pred CcHHHHHHHHHHhhcccc
Confidence 999999999988776553
No 101
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-55 Score=459.02 Aligned_cols=465 Identities=15% Similarity=0.148 Sum_probs=333.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc--C
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--A 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--~ 79 (499)
+++||+|+|+++|+++|++++|||+++|++++|+++.++++++.+++++++++++|++.... ..+...... .
T Consensus 143 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~ 216 (700)
T PTZ00216 143 LTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGM 216 (700)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccC
Confidence 68999999999999999999999999999999999999999999999999999999987432 111111111 1
Q ss_pred CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh
Q 010854 80 PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 159 (499)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~ 159 (499)
+...++.................+|+++...+... ...........++|+++++|||||||.||||+++|+++.+.+..
T Consensus 217 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~ 295 (700)
T PTZ00216 217 PNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSA-GSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILA 295 (700)
T ss_pred CceEEEEECCCccccccCCceEEEHHHHHHhCCcc-ccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHH
Confidence 11222221110000001122345778777654210 01111123346899999999999999999999999999887766
Q ss_pred cceec-----cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHH-------HHHHhCCeEEecchHH
Q 010854 160 GWAHI-----DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSL 227 (499)
Q Consensus 160 ~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~P~~ 227 (499)
....+ .+.++|++++++|++|.++.......+..|+.+++.+ +..+.+ .+++++||++.++|.+
T Consensus 296 ~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l~~~~pT~~~~vP~~ 371 (700)
T PTZ00216 296 LEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDLTEFRPVFLIGVPRI 371 (700)
T ss_pred HHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchHHHcCCcEEEechHH
Confidence 54332 2467899999999999998766555677888776632 333333 6899999999999999
Q ss_pred HHHHHccCCC-------------------------Ccc----------------cccceeEEEeecCCCChhhHHHHHhh
Q 010854 228 VKAWRNTNCL-------------------------EGL----------------DWTKIRSFASTGETSNVDDDLWLSSK 266 (499)
Q Consensus 228 l~~l~~~~~~-------------------------~~~----------------~l~~l~~i~~~G~~l~~~~~~~~~~~ 266 (499)
++.+.+.... .+. ..+++|.+++||+++++++.++++..
T Consensus 372 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~ 451 (700)
T PTZ00216 372 FDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVV 451 (700)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHH
Confidence 9887642100 000 01579999999999999998887765
Q ss_pred cccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCC--CCCCCCCcceeeEe-ccccccccccccc
Q 010854 267 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGV--PYPDDQPCVGEVGL-FPLYLGASDRLLN 343 (499)
Q Consensus 267 ~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~--~~~~g~~~~Gei~v-~~~~~~~~~~~~~ 343 (499)
+ + .+++.||+||+++....... .....+++|.|+|+++++|+|+.+. ..+++. .|||+| ++..+.+ ++.+
T Consensus 452 ~-~-~l~~~YG~TEt~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~vrG~~v~~G--Y~~~ 524 (700)
T PTZ00216 452 F-G-MVIQGWGLTETVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILLRGPFLFKG--YYKQ 524 (700)
T ss_pred h-h-hHhhccCcccccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEEcCCcccch--hcCC
Confidence 5 5 89999999999765443332 2335689999999999999996542 233344 499999 6665543 3444
Q ss_pred ccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeee-eCceeechHHHHHHHhhcCccceee--eEEEeCC
Q 010854 344 ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILET--AAISVSP 420 (499)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~--~v~~~~~ 420 (499)
++.+...| ..++||+|||+|++|+||+|+++||.||+|| ++|++|+|.+||+++. .||.|.++ +|+..++
T Consensus 525 pe~T~~~f------~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p~V~~~~~~v~~~~~ 597 (700)
T PTZ00216 525 EELTREVL------DEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNELVVPNGVCVLVHPA 597 (700)
T ss_pred hhHhhhhc------cccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCcCcccceEEEEEecC
Confidence 55444444 2357999999999999999999999999999 8999999999999996 99999873 4444332
Q ss_pred CCCCceEEEEEEEecCCC----------CC------CHHHHHHHHHHHH-----HhhcCCceeeeEEEEcCC-C-----C
Q 010854 421 AGGGPEVLVIFVVLKKGF----------TS------QPDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPE-F-----P 473 (499)
Q Consensus 421 ~~~~~~~~~~~v~~~~~~----------~~------~~~~l~~~~~~~~-----~~~l~~~~~p~~~~~~~~-i-----P 473 (499)
. ..++++|++.... .. +..++.+.+.+.+ +.++..|..+++|+++++ + -
T Consensus 598 ---~-~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~ 673 (700)
T PTZ00216 598 ---R-SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGV 673 (700)
T ss_pred ---C-ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCC
Confidence 2 6788888875311 00 1122333333333 347889999999988753 2 3
Q ss_pred CCCCcHHHHHHHHHHHHhhhhh
Q 010854 474 RTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 474 ~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
+|+++|+.|+.+++.|++++++
T Consensus 674 lT~t~K~~R~~i~~~y~~~i~~ 695 (700)
T PTZ00216 674 LTAAMKLKRRVIDERYADLIKE 695 (700)
T ss_pred CChhhccchHHHHHHHHHHHHH
Confidence 6999999999999999998875
No 102
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=4.9e-54 Score=443.56 Aligned_cols=472 Identities=21% Similarity=0.246 Sum_probs=349.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc---
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--- 78 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--- 78 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++.+++++++++.+|+++... +........
T Consensus 67 ~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~ 140 (567)
T PLN02479 67 IGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF------TLAEEALKILAE 140 (567)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhh------hHHHHHHHHHhh
Confidence 68999999999999999999999999999999999999999999999999999999987532 111111110
Q ss_pred ------CCCceEEecccC-C--CCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010854 79 ------APLKAIVLPAIG-N--DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT 149 (499)
Q Consensus 79 ------~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s 149 (499)
.....+++.... . ........+...+.+++..... . .........++.++++|||||||.||+|.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~s 216 (567)
T PLN02479 141 KKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFLETGDP--E--FAWKPPADEWQSIALGYTSGTTASPKGVVLH 216 (567)
T ss_pred cccccCCCceEEEecCCcCCccccccccccCcccHHHHHhcccc--c--cccCCCCCcccceEEEECCCCCCCCcEEEec
Confidence 111222222110 0 0000112234456666553221 0 0111122345677899999999999999999
Q ss_pred chhhHHHhhhcceeccCcCCcEEEeecCccccchhhhhh-hhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHH
Q 010854 150 QLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILF-SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLV 228 (499)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~-~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l 228 (499)
|+++..........++++.++++++.+|++|.+++...+ ..++.|.++++ . .++++.+++.++++++|++.++|+++
T Consensus 217 h~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~ 294 (567)
T PLN02479 217 HRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVL 294 (567)
T ss_pred cHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHH
Confidence 999876655555566788899999999999999976644 34555555444 3 46789999999999999999999999
Q ss_pred HHHHccCCCCc-ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC----------CCCccc
Q 010854 229 KAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----------QPQAFG 297 (499)
Q Consensus 229 ~~l~~~~~~~~-~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~----------~~~~~~ 297 (499)
..|.+...... .++++++.++++|+.+++.+.+.+... +.++++.||+||+++.+...... ......
T Consensus 295 ~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (567)
T PLN02479 295 NTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNA 372 (567)
T ss_pred HHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceeccccccccCccccccccc
Confidence 99987654333 256889999999999999988887654 68899999999986433221100 001123
Q ss_pred cccccCCCce-EEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecC
Q 010854 298 AFSTATMTAG-LVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG 374 (499)
Q Consensus 298 ~~g~~~~~~~-~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 374 (499)
..|.+.+++. ++|+| +++.+++.+...+|||++ ++..+.+ ++.+++.+...| .++||+|||+++++++
T Consensus 373 ~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~G--Y~~~~~~t~~~~-------~~g~~~TGDl~~~~~~ 443 (567)
T PLN02479 373 RQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKG--YLKNPKANEEAF-------ANGWFHSGDLGVKHPD 443 (567)
T ss_pred ccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhh--hhcCcccccchh-------cCCceecceeEEEcCC
Confidence 5677888875 88998 678888764212699999 5443322 233333333333 2469999999999999
Q ss_pred ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHH
Q 010854 375 GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ-PDKLKMIFSKAI 453 (499)
Q Consensus 375 G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~~~~ 453 (499)
|++++.||.+|+|+++|++|+|.+||.+|. .||.|.+++|++.++...+ +.+++++++..+...+ .+.+.+.+.+++
T Consensus 444 g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 521 (567)
T PLN02479 444 GYIEIKDRSKDIIISGGENISSLEVENVVY-THPAVLEASVVARPDERWG-ESPCAFVTLKPGVDKSDEAALAEDIMKFC 521 (567)
T ss_pred ccEEEeccccceEEeCCEEEcHHHHHHHHH-hCcccceeeEEeccchhcC-ceeEEEEEecCcccccchhhhHHHHHHHH
Confidence 999999999999999999999999999996 8999999999999887776 8899999987654322 234455677778
Q ss_pred HhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHh-hhhhccCC
Q 010854 454 QSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH-ELSVRSRI 499 (499)
Q Consensus 454 ~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~-~~~~~~~~ 499 (499)
+++|+.|+.|..+++ ++||+|++||++|+.|++.+.. +...+|||
T Consensus 522 ~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~~~~~~ 567 (567)
T PLN02479 522 RERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPVKKSRL 567 (567)
T ss_pred HhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCcccccC
Confidence 889999999988776 6799999999999999888776 77777776
No 103
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.3e-55 Score=528.83 Aligned_cols=449 Identities=17% Similarity=0.189 Sum_probs=364.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC--
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-- 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-- 79 (499)
+++|++|++++++++++++++||++++|++++|++|.++.+.+.+++++++++++|++..+.. .........
T Consensus 3767 v~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~------~~~~~~~~~~~ 3840 (4334)
T PRK05691 3767 VGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACRE------QARALLDELGC 3840 (4334)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccc------hhhhhhccccc
Confidence 789999999999999999999999999999999999999999999999999999999885421 111111100
Q ss_pred -CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 80 -PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
.....++ +++..... ...........++++|+++|||||||.||||+++|+++.+.+.
T Consensus 3841 ~~~~~~~~-----------------~~~~~~~~----~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~ 3899 (4334)
T PRK05691 3841 ANRPRLLV-----------------WEEVQAGE----VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQL 3899 (4334)
T ss_pred ccccceee-----------------eccccccc----ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHH
Confidence 0000100 01110100 0111122345679999999999999999999999999999999
Q ss_pred hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCC--ChhHHHHHHHHhCCeEEecchHHHHHHHccCC
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 236 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~--~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 236 (499)
+....++++++|+++...+++|..+.+.++.+++.|+++++++... ++..+.+.++++++|++.++|+++..++...
T Consensus 3900 ~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~- 3978 (4334)
T PRK05691 3900 SKVPYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED- 3978 (4334)
T ss_pred HHHHhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc-
Confidence 8888899999999999999999999999999999999999987533 5778999999999999999999999887543
Q ss_pred CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCC---CCCccccccccCCCceEEEECC
Q 010854 237 LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDE 313 (499)
Q Consensus 237 ~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~i~d~ 313 (499)
...+++||.+++|||++++++.+.+.+..+++++++.||+||++..+...... ......++|.|++++.++|+|+
T Consensus 3979 --~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~ 4056 (4334)
T PRK05691 3979 --RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDE 4056 (4334)
T ss_pred --cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECC
Confidence 23467899999999999999999888888889999999999998755433222 1223457999999999999999
Q ss_pred CCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCC-CCCccccccCceeEeecCceEEEecccCCeeeeCc
Q 010854 314 CGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGG 391 (499)
Q Consensus 314 ~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G 391 (499)
.++++|.|. +|||+| ++....+ ++.+++.+...|...|. ..+++||||||++++++||+|+++||.|++||++|
T Consensus 4057 ~~~~~p~g~--~GEL~i~G~~v~~G--Y~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G 4132 (4334)
T PRK05691 4057 ALELVPLGA--VGELCVAGTGVGRG--YVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRG 4132 (4334)
T ss_pred CCCCCCCCC--ceEEEEeccccccc--ccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEece
Confidence 999999998 599999 5555443 44556666666655554 35789999999999999999999999999999999
Q ss_pred eeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCC
Q 010854 392 IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 471 (499)
Q Consensus 392 ~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~ 471 (499)
++|.+.|||++|. .+|+|.+++|+...+ ..+ +.++++++...+.. ...+..+.++++++++|+.|+.|..++++++
T Consensus 4133 ~riel~eIE~~l~-~~~~v~~a~v~~~~~-~~~-~~l~a~~~~~~~~~-~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~ 4208 (4334)
T PRK05691 4133 YRIELGEIEARLH-EQAEVREAAVAVQEG-VNG-KHLVGYLVPHQTVL-AQGALLERIKQRLRAELPDYMVPLHWLWLDR 4208 (4334)
T ss_pred EEecHHHHHHHHH-hCCCccEEEEEEecC-CCC-cEEEEEEeCCcccc-cchHHHHHHHHHHHhhCChhhcCcceeeccc
Confidence 9999999999996 999999988765543 344 78999998765433 3334556788888899999999999999999
Q ss_pred CCCCCCcHHHHHHHHHH
Q 010854 472 FPRTASNKLLRRVLRDQ 488 (499)
Q Consensus 472 iP~t~~GKv~r~~l~~~ 488 (499)
||+|++|||||++|++.
T Consensus 4209 lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4209 LPLNANGKLDRKALPAL 4225 (4334)
T ss_pred CCCCCCCcccHhhcCCC
Confidence 99999999999999865
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-53 Score=436.57 Aligned_cols=457 Identities=19% Similarity=0.143 Sum_probs=350.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++.++.+.+.+++++++++.++++.... ............
T Consensus 46 ~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~ 119 (511)
T PRK13391 46 LKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPG 119 (511)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999987532 111112121111
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec--chhhHH---H
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSIR---C 156 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s--~~~~~~---~ 156 (499)
....+...... .......+.+....... ....+.++.++++|||||||.||+|.++ |.+... .
T Consensus 120 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~ 187 (511)
T PRK13391 120 VRHRLVLDGDG----ELEGFVGYAEAVAGLPA--------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPL 187 (511)
T ss_pred ceEEEEecCCC----CCcccccHHHHhcCCCC--------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHH
Confidence 11111111100 01122233433321111 0112345678999999999999999965 544322 2
Q ss_pred hhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCC
Q 010854 157 TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 236 (499)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 236 (499)
.......+++..+++++...|++|.+++...+.++..|+++++.+ ..+++.+++.++++++|++.++|+++..+.+...
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 266 (511)
T PRK13391 188 TAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPE 266 (511)
T ss_pred HHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCch
Confidence 233344566788999999999999998887888999999999986 5678999999999999999999999998876543
Q ss_pred --CCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCC
Q 010854 237 --LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC 314 (499)
Q Consensus 237 --~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~ 314 (499)
....++++++.++++|+++++++.+.+.+.+ +..+++.||+||++.+............+++|.|.++ .++++|++
T Consensus 267 ~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~ 344 (511)
T PRK13391 267 EVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDD 344 (511)
T ss_pred hhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCC
Confidence 2244678999999999999999999888765 6789999999999875543333233456789999999 69999999
Q ss_pred CCCCCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 315 GVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 315 g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
|.+++.|+ .|||++....+- .++.+++.+...+. .+++||+|||+|+++++|++++.||.+|+++++|.+|
T Consensus 345 ~~~~~~g~--~Gel~~~g~~~~--gy~~~~~~~~~~~~-----~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v 415 (511)
T PRK13391 345 GAELPPGE--PGTIWFEGGRPF--EYLNDPAKTAEARH-----PDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNI 415 (511)
T ss_pred CCCCCCCC--ceEEEEecCcce--EEcCChhHhHHhhc-----cCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEE
Confidence 99999998 499999333332 23333333332221 1248999999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCC
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPR 474 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~ 474 (499)
+|.+||+++. .||.|.+++|++.+++..+ +.+++++++..+...+ +++.+.+++++++.|+.|+.|..+.+++++|+
T Consensus 416 ~~~eie~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~ 492 (511)
T PRK13391 416 YPQEAENLLI-THPKVADAAVFGVPNEDLG-EEVKAVVQPVDGVDPG-PALAAELIAFCRQRLSRQKCPRSIDFEDELPR 492 (511)
T ss_pred CHHHHHHHHH-hCCCcceEEEEecCCcccC-ceeEEEEEECCCCCcc-cchHHHHHHHHHhhcccCcCCcEEEEeecCCC
Confidence 9999999997 8999999999999888777 7888888877643322 33455677778889999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHh
Q 010854 475 TASNKLLRRVLRDQIKH 491 (499)
Q Consensus 475 t~~GKv~r~~l~~~~~~ 491 (499)
|++||++|+.|++.+.+
T Consensus 493 t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 493 LPTGKLYKRLLRDRYWG 509 (511)
T ss_pred CCccceeHHHHHHHhhc
Confidence 99999999999998765
No 105
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.4e-53 Score=438.28 Aligned_cols=457 Identities=22% Similarity=0.197 Sum_probs=346.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhc-CC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-AP 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~ 80 (499)
+++||+|+++++|+++++++++||+++|++++|++|..+.+++.+++++++++.+|+++.. .......+.... ..
T Consensus 68 i~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~----~~~~~~~~~~~~~~~ 143 (541)
T TIGR03205 68 YGKDASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLA----ALLPMALKFLEKGLL 143 (541)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCch----hhhHHHHHhhhcccc
Confidence 6799999999999999999999999999999999999999999999999999999987531 000111111111 11
Q ss_pred CceEEecccCC-CC-----CCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 81 LKAIVLPAIGN-DV-----GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 81 ~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
...++...... .. .........++++++..... ........++++++++|||||||.||+|+++|+++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~ 218 (541)
T TIGR03205 144 DRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKGAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLT 218 (541)
T ss_pred eEEEEecccccccccccccccCCCcccccHHHHHhcCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHH
Confidence 11222211100 00 00112234556666543211 111123457899999999999999999999999987
Q ss_pred HHhhhcce-----eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHH
Q 010854 155 RCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLV 228 (499)
Q Consensus 155 ~~~~~~~~-----~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l 228 (499)
........ .......+++++.+|++|.+++.. ++.++..|+++++.. ..+++.+++.|+++++|++.++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 297 (541)
T TIGR03205 219 SAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMW 297 (541)
T ss_pred HHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHH
Confidence 65432111 112234578899999999988766 788899999888775 56789999999999999999999999
Q ss_pred HHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceE
Q 010854 229 KAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 308 (499)
Q Consensus 229 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 308 (499)
..+.+.......++++++.++.+|+++++++.+++...+ +..+++.||+||++..............+++|.|++++.+
T Consensus 298 ~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 376 (541)
T TIGR03205 298 IALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIEL 376 (541)
T ss_pred HHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCCCCCCCCcceeccCcee
Confidence 999876544455678999999999999999988887655 6889999999999876655444334456789999999998
Q ss_pred EEE--CCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCC
Q 010854 309 VIL--DECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 385 (499)
Q Consensus 309 ~i~--d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d 385 (499)
+++ |+.+++++.|+ .|||++ ++..+.+ ++.++..+...|. .+||+|||+++++++|++++.||.+|
T Consensus 377 ~v~~~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~i~GR~~~ 445 (541)
T TIGR03205 377 DVVSLDDPTKVLPPGE--VGELRIRGPNVTRG--YWNRPEESAEAFV-------GDRFLTGDIGYMDTDGYFFLVDRKKD 445 (541)
T ss_pred EEEecCCCCccCCCCC--eeEEEEecCCcccc--ccCChhhhHhhhc-------cCCcccCceEEEcCCceEEEEccccC
Confidence 875 57888999888 599999 4443332 2222222222221 35789999999999999999999999
Q ss_pred eeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhhcCCceeee
Q 010854 386 TMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVS 464 (499)
Q Consensus 386 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~p~ 464 (499)
++|++|++|+|.+||+++. .+++|.+++|++++++..+ +.+++++++.++.. .+.++ ++++++++|+.|+.|.
T Consensus 446 ~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~----l~~~~~~~l~~~~~P~ 519 (541)
T TIGR03205 446 MIISGGFNVYPQMIEQAIY-EHPGVQEVIVIGIPDQYRG-EAAKAFVKLRPGAKPFSLDE----LRAFLAGKLGKHELPV 519 (541)
T ss_pred eEEECCEEECHHHHHHHHH-hCCCeeeEEEEecCCcccC-ceEEEEEEECCCCCcCCHHH----HHHHHHhhcccccCCc
Confidence 9999999999999999997 8999999999999987777 88899998876532 34444 4445667899999999
Q ss_pred EEEEcCCCCCCCCcHHHHHHHH
Q 010854 465 LVKVVPEFPRTASNKLLRRVLR 486 (499)
Q Consensus 465 ~~~~~~~iP~t~~GKv~r~~l~ 486 (499)
+++++++||+|++||++|++|+
T Consensus 520 ~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 520 AVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EEEEeccCCCCcccceeHhhcC
Confidence 9999999999999999999874
No 106
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-54 Score=425.17 Aligned_cols=378 Identities=15% Similarity=0.142 Sum_probs=319.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++|++|+++++|++++++++||++++|++++|+++..+.+.+..++++++++.+++++... .
T Consensus 29 ~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~----------- 91 (414)
T PRK08308 29 EAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGESDF------T----------- 91 (414)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecCccc------c-----------
Confidence 57899999999999999999999999999999999999999999999999999999865210 0
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
. . . .....++++++++|||||||.||+|.++|+++...+....
T Consensus 92 ----~-------------~--------~------------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~ 134 (414)
T PRK08308 92 ----K-------------L--------E------------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYN 134 (414)
T ss_pred ----c-------------c--------c------------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHH
Confidence 0 0 0 0012457899999999999999999999999998888777
Q ss_pred eeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..+.+..+|+++..+|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+.....
T Consensus 135 ~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-- 211 (414)
T PRK08308 135 EALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGT-- 211 (414)
T ss_pred HhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCcc--
Confidence 7788889999999999999999865 889999999999886 467889999999999999999999999998764321
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCC
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 320 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~ 320 (499)
.+++.++++|+.+++++...++.. ..++++.||+||++....... .....++|+|+|++++++.++.
T Consensus 212 --~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~---~~~~~~~G~p~~~~~~~~~~~~------ 278 (414)
T PRK08308 212 --FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICPD---MKSHLDLGNPLPHVSVSAGSDE------ 278 (414)
T ss_pred --ccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecCC---CCCCCccCccCCCeEEEEecCC------
Confidence 368889999999999998888765 468999999999986443221 2245689999999999998643
Q ss_pred CCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHH
Q 010854 321 DQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 400 (499)
Q Consensus 321 g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE 400 (499)
++ .||+++.. +++||+|||+++++++|++++.||.+|++|++|++|+|.+||
T Consensus 279 ~~--~gel~v~~--------------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE 330 (414)
T PRK08308 279 NA--PEEIVVKM--------------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVE 330 (414)
T ss_pred CC--CceEEEEc--------------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHH
Confidence 33 39998731 235899999999999999999999999999999999999999
Q ss_pred HHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHH
Q 010854 401 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 480 (499)
Q Consensus 401 ~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv 480 (499)
+++. .+|+|.+++|++.+++..+ +.++++++... ..+.+++.++ ++++|+.|+.|..++++++||+|++||+
T Consensus 331 ~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~--~~~~~~l~~~----l~~~l~~~~~P~~i~~v~~iP~t~~GKi 402 (414)
T PRK08308 331 DVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHE--EIDPVQLREW----CIQHLAPYQVPHEIESVTEIPKNANGKV 402 (414)
T ss_pred HHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC--CCCHHHHHHH----HHHhCccccCCcEEEEeccCCCCCCcCe
Confidence 9996 8999999999999988777 88888888654 3455555544 5678899999999999999999999999
Q ss_pred HHHHH
Q 010854 481 LRRVL 485 (499)
Q Consensus 481 ~r~~l 485 (499)
+|+.|
T Consensus 403 ~r~~~ 407 (414)
T PRK08308 403 SRKLL 407 (414)
T ss_pred ehhhh
Confidence 99954
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2e-54 Score=523.80 Aligned_cols=443 Identities=20% Similarity=0.189 Sum_probs=359.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|++++++++++++++||++++|++++|++|.++.+++.+++++++++++|+++...... .....
T Consensus 1178 v~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~----------~~~~~ 1247 (4334)
T PRK05691 1178 VGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERL----------PQAEG 1247 (4334)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhc----------ccccC
Confidence 68999999999999999999999999999999999999999999999999999999987532110 00000
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
. ..+.. +++.... ...........++++++++|||||||.||||+++|+++.+.+.+..
T Consensus 1248 ~-~~~~~----------------~~~~~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~ 1306 (4334)
T PRK05691 1248 V-SAIAL----------------DSLHLDS----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQ 1306 (4334)
T ss_pred c-eEEee----------------ccccccc----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHH
Confidence 0 00100 0000000 0001111234578999999999999999999999999999998888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC--CCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+++.++|+++...|++|..++..++.+++.|+++++.+. ..++..+++.++++++|++.++|++++.|.+... .
T Consensus 1307 ~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~ 1384 (4334)
T PRK05691 1307 ATYALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--A 1384 (4334)
T ss_pred HhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--c
Confidence 88899999999999999999999889999999999999864 3467899999999999999999999999986533 2
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC-CCCCccccccccCCCceEEEECCCCCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPY 318 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d~~g~~~ 318 (499)
.+++++|.+++|||++++++.+.+...+++..+++.||+||++..+..... .......++|+|++++.++|+|+.++++
T Consensus 1385 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~v 1464 (4334)
T PRK05691 1385 AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLL 1464 (4334)
T ss_pred ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCC
Confidence 357899999999999999999999888878899999999999865543221 2223456899999999999999999999
Q ss_pred CCCCCcceeeEe-cccccccccccccccccchhhcCCCCC-CCccccccCceeEeecCceEEEecccCCeeeeCceeech
Q 010854 319 PDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 396 (499)
Q Consensus 319 ~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~ 396 (499)
+.|. +|||+| ++....+ ++.+++.+...|...|.. .+.+||+|||+|++++||+++++||.|++||++|++|+|
T Consensus 1465 p~G~--~GEL~i~G~~v~~G--Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~ 1540 (4334)
T PRK05691 1465 PPGV--AGELCIGGAGLARG--YLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEP 1540 (4334)
T ss_pred CCCC--ceEEEecCcccchh--hcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCH
Confidence 9998 599999 5554443 344555566566554443 367899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCC
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
.|||++|. .+|+|.+++|+...+. .+ ..++++++...+...+.++ +++.+.++|+.|++|..++++++||+|+
T Consensus 1541 ~eIE~~l~-~~~~V~~a~v~~~~~~-~~-~~lva~~~~~~~~~~~~~~----l~~~l~~~Lp~y~vP~~~~~~~~lP~t~ 1613 (4334)
T PRK05691 1541 EEIQARLL-AQPGVAQAAVLVREGA-AG-AQLVGYYTGEAGQEAEAER----LKAALAAELPEYMVPAQLIRLDQMPLGP 1613 (4334)
T ss_pred HHHHHHHH-hCCCcceEEEEEeeCC-CC-CEEEEEEEeCCCCCCCHHH----HHHHHHHhCccccCCcEEEEccccCCCC
Confidence 99999997 8999999999866544 44 7889999877655445444 4445667999999999999999999999
Q ss_pred CcHHHHHHHHHH
Q 010854 477 SNKLLRRVLRDQ 488 (499)
Q Consensus 477 ~GKv~r~~l~~~ 488 (499)
+||++|++|++.
T Consensus 1614 ~GKidr~~L~~~ 1625 (4334)
T PRK05691 1614 SGKLDRRALPEP 1625 (4334)
T ss_pred CCCcChhhcCcc
Confidence 999999999754
No 108
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-53 Score=428.91 Aligned_cols=407 Identities=17% Similarity=0.163 Sum_probs=328.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+++++..++++++++.++++..... ... ..
T Consensus 50 ~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~----~~- 117 (458)
T PRK09029 50 VVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-------FSA----LT- 117 (458)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-------hhh----cc-
Confidence 678999999999999999999999999999999999999999999999999999998764210 000 00
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
. ..+. .. ....+....++++++++|||||||.||+|.++|+++...+....
T Consensus 118 ----------~---------~~~~-----~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~ 168 (458)
T PRK09029 118 ----------S---------LHLQ-----LV-----EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVL 168 (458)
T ss_pred ----------c---------cccc-----cc-----cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHh
Confidence 0 0000 00 00112234578999999999999999999999999999988888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..++...+|+++..+|++|.+++..++.++..|+++++.+. ..+.+.+ .++|.+..+|+++..+......
T Consensus 169 ~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~---- 238 (458)
T PRK09029 169 SLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE---- 238 (458)
T ss_pred hcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----
Confidence 88889999999999999999998778888999999998763 4566666 3799999999999999876443
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDD 321 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g 321 (499)
..++|.+++||+.+++.+.+.+.. . +.++++.||+||++...+.... ....++|+|++++.+++++
T Consensus 239 ~~~l~~i~~gG~~~~~~~~~~~~~-~-g~~~~~~YG~tE~~~~~~~~~~---~~~~~~G~~~~~~~~~i~~--------- 304 (458)
T PRK09029 239 PLSLKAVLLGGAAIPVELTEQAEQ-Q-GIRCWCGYGLTEMASTVCAKRA---DGLAGVGSPLPGREVKLVD--------- 304 (458)
T ss_pred CCcceEEEECCCCCCHHHHHHHHH-c-CCcEeccccccccCcceeccCC---CCCCCCCCCCCCCEEEEeC---------
Confidence 347999999999999998888764 3 7889999999999865443322 2235689999999999986
Q ss_pred CCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHH
Q 010854 322 QPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 400 (499)
Q Consensus 322 ~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE 400 (499)
||+++ ++..+.++ +.+++.+ ....+++||+|||+|++| +|++++.||.+|+|+++|.+|+|.+||
T Consensus 305 ----gel~v~g~~~~~gY--~~~~~~~-------~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE 370 (458)
T PRK09029 305 ----GEIWLRGASLALGY--WRQGQLV-------PLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIE 370 (458)
T ss_pred ----CEEEEecCceeeee--ecCcccc-------ccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHH
Confidence 78888 44433321 1111111 112356899999999999 999999999999999999999999999
Q ss_pred HHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHH
Q 010854 401 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 480 (499)
Q Consensus 401 ~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv 480 (499)
+++. .+|+|.+++|++.+++..+ +.++++|+... ..+.++ ++++++++|++|+.|.++++++++|+|.+||+
T Consensus 371 ~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~--~~~~~~----l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi 442 (458)
T PRK09029 371 RVIN-QHPLVQQVFVVPVADAEFG-QRPVAVVESDS--EAAVVN----LAEWLQDKLARFQQPVAYYLLPPELKNGGIKI 442 (458)
T ss_pred HHHh-cCCCcceEEEEccCCcccC-ceEEEEEEcCc--ccCHHH----HHHHHHhhchhccCCeEEEEecccccCcCCCc
Confidence 9996 8999999999999998887 88999988663 234444 44456678999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 010854 481 LRRVLRDQIKHELSV 495 (499)
Q Consensus 481 ~r~~l~~~~~~~~~~ 495 (499)
+|+.|++++.+..++
T Consensus 443 ~r~~L~~~~~~~~~~ 457 (458)
T PRK09029 443 SRQALKEWVAQQLGN 457 (458)
T ss_pred CHHHHHHHHHhccCC
Confidence 999999999987654
No 109
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-52 Score=429.52 Aligned_cols=462 Identities=20% Similarity=0.218 Sum_probs=339.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++.++++.... ..+.+.....+.
T Consensus 65 ~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~ 138 (545)
T PRK08162 65 IGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPG 138 (545)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCC
Confidence 68999999999999999999999999999999999999999999999999999999987542 222222111111
Q ss_pred -ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 82 -KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
...++.............+..++..+...... ........+.+++++++|||||||.||+|+++|+++...+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~ 214 (545)
T PRK08162 139 PKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP----DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSN 214 (545)
T ss_pred CceEEEecCccccccCCCcccccHHHHhccCCc----cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 12222211111000011223455555543211 1111122345689999999999999999999999876666555
Q ss_pred ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
...+.+..++++++.+|++|.+++...+...+.|++.++.. ..+++.+++.++++++|++.++|++++.|++.......
T Consensus 215 ~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~ 293 (545)
T PRK08162 215 ILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGTNVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRA 293 (545)
T ss_pred HHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccEEEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccccc
Confidence 55567788899999999999999876444445666666654 46789999999999999999999999999876544333
Q ss_pred cccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCC----------CCccccccccCC-CceEE
Q 010854 241 DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATM-TAGLV 309 (499)
Q Consensus 241 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~----------~~~~~~~g~~~~-~~~~~ 309 (499)
.+.+.+.++++|+.++....+.+.. . +..+++.||+||+++.+..+.... .....+.|.+.+ +..++
T Consensus 294 ~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 371 (545)
T PRK08162 294 GIDHPVHAMVAGAAPPAAVIAKMEE-I-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVT 371 (545)
T ss_pred CCccceEEEECCCCCCHHHHHHHHH-h-CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEE
Confidence 4556677788999998888887764 3 788999999999864433321110 011244566554 34578
Q ss_pred EEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCee
Q 010854 310 ILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM 387 (499)
Q Consensus 310 i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i 387 (499)
++| +.+.+++.+...+|||++ ++..+.+ ++.+++.+...|. ++||+|||++++|++|++++.||.+|++
T Consensus 372 i~d~~~~~~~~~~g~~~Gel~v~g~~~~~g--Y~~~~~~~~~~~~-------~g~~~TGDl~~~d~dg~l~~~GR~~~~i 442 (545)
T PRK08162 372 VLDPDTMQPVPADGETIGEIMFRGNIVMKG--YLKNPKATEEAFA-------GGWFHTGDLAVLHPDGYIKIKDRSKDII 442 (545)
T ss_pred EEcCCCCcccCCCCCceeEEEEecCcchhh--hcCChhhhHHHhh-------CCCcccCceEEEcCCccEEEEecccceE
Confidence 888 578888763212599999 4443332 2333333333332 4699999999999999999999999999
Q ss_pred eeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEE
Q 010854 388 NLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVK 467 (499)
Q Consensus 388 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~ 467 (499)
+++|.+|+|.+||++|. .+|+|.+++|++.+++..+ +.+++++++.++...+.+++.+ .+++.|+.|+.|..++
T Consensus 443 ~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~~~ 516 (545)
T PRK08162 443 ISGGENISSIEVEDVLY-RHPAVLVAAVVAKPDPKWG-EVPCAFVELKDGASATEEEIIA----HCREHLAGFKVPKAVV 516 (545)
T ss_pred EeCCEEECHHHHHHHHH-hCCcccEEEEEeeeccccC-ceEEEEEEeCCCCCCCHHHHHH----HHHHhcccccCCcEEE
Confidence 99999999999999996 8999999999999887777 8899999988765555554444 4667899999998887
Q ss_pred EcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 468 VVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 468 ~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
+ ++||+|++||++|+.|++.+.+-
T Consensus 517 ~-~~iP~t~~gK~~r~~l~~~~~~l 540 (545)
T PRK08162 517 F-GELPKTSTGKIQKFVLREQAKSL 540 (545)
T ss_pred e-cccCCCCCcCCcHHHHHHHHhhh
Confidence 5 68999999999999999886543
No 110
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.1e-53 Score=423.27 Aligned_cols=414 Identities=21% Similarity=0.224 Sum_probs=329.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+.+.+..++++++++.+++++.... . ..
T Consensus 21 ~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~---~~----- 86 (436)
T TIGR01923 21 IRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSLLEE------K---DF----- 86 (436)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCcccc------c---ce-----
Confidence 679999999999999999999999999999999999999999999999999999999874210 0 00
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+.++...... ..........+++++++|||||||.||+|+++|+++...+....
T Consensus 87 ------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~ 144 (436)
T TIGR01923 87 ------------------QADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSK 144 (436)
T ss_pred ------------------eecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 00111111111110 01112234568999999999999999999999999998888888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 241 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 241 (499)
..++++++|+++..+|++|.+++..++.++..|+++++.+.. +.+++.++++++|++.++|+++..|++.....
T Consensus 145 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~--- 218 (436)
T TIGR01923 145 ENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN--- 218 (436)
T ss_pred hhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC---
Confidence 888999999999999999999987789999999999998643 48899999999999999999999998875422
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEE-CCCCCCCCC
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL-DECGVPYPD 320 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~-d~~g~~~~~ 320 (499)
+++|.++++|+++++++.+++.. . +..+++.||+||++...............++|.|++++++++. ++.+
T Consensus 219 -~~l~~~~~~G~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~----- 290 (436)
T TIGR01923 219 -ENLRKILLGGSAIPAPLIEEAQQ-Y-GLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNKE----- 290 (436)
T ss_pred -CceEEEEECCCCCCHHHHHHHHH-h-CCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCCC-----
Confidence 68999999999999998888764 3 7889999999999876554443322222358999999999994 4332
Q ss_pred CCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHH
Q 010854 321 DQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 399 (499)
Q Consensus 321 g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~i 399 (499)
+ .||+++ ++..+.+ ++.+..... ....++||+|||+++++++|++++.||.+|++|++|.+|+|.+|
T Consensus 291 -~--~Gel~v~~~~~~~g--y~~~~~~~~-------~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~i 358 (436)
T TIGR01923 291 -G--HGEIMVKGANLMKG--YLYQGELTP-------AFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEI 358 (436)
T ss_pred -C--ceEEEEECCccchh--hCCChhhhh-------hhhcCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHH
Confidence 3 499999 4443332 111111111 11245799999999999999999999999999999999999999
Q ss_pred HHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcH
Q 010854 400 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 479 (499)
Q Consensus 400 E~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GK 479 (499)
|+++. .++.|.++++++.++...+ ..+.+++++.++ .+.+++.++ +.+.|+.|+.|..++++++||+|++||
T Consensus 359 E~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~--~~~~~l~~~----l~~~l~~~~~p~~i~~~~~iP~t~~GK 430 (436)
T TIGR01923 359 ETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSESD--ISQAKLIAY----LTEKLAKYKVPIAFEKLDELPYNASGK 430 (436)
T ss_pred HHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECCC--CCHHHHHHH----HHHhhhCCCCCeEEEEecCCCCCCCCc
Confidence 99996 8999999999988876666 788888887653 344445544 556888999999999999999999999
Q ss_pred HHHHHH
Q 010854 480 LLRRVL 485 (499)
Q Consensus 480 v~r~~l 485 (499)
++|++|
T Consensus 431 ~~r~~L 436 (436)
T TIGR01923 431 ILRNQL 436 (436)
T ss_pred eecccC
Confidence 999864
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-53 Score=442.49 Aligned_cols=457 Identities=16% Similarity=0.128 Sum_probs=329.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCH-----HHHHHHhhcCCeeEEEecccccccCccccchhhhh
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL 76 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 76 (499)
+++||+|+++++|+++|++++|||+++|++++|++|.++. +++.+++++++++++|+++... ........
T Consensus 102 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~ 176 (624)
T PRK12582 102 LDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP-----FARALAAL 176 (624)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH-----HHHHHHhh
Confidence 6899999999999999999999999999999999999875 8999999999999999976310 00000111
Q ss_pred hcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHH
Q 010854 77 GAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 156 (499)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~ 156 (499)
.......+++.. .. .......+.++...... ...........++++++++|||||||.||||+++|+++...
T Consensus 177 ~~~~~~~i~~~~--~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~ 248 (624)
T PRK12582 177 DLLDVTVVHVTG--PG----EGIASIAFADLAATPPT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCAN 248 (624)
T ss_pred hhcCceEEEEcC--CC----cccccccHHHHhhcCCc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHH
Confidence 111112222211 10 01123456665543211 00001112345789999999999999999999999999877
Q ss_pred hhhcceeccCcC---CcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCCh---hHHHHHHHHhCCeEEecchHHHH
Q 010854 157 TAEGWAHIDLKV---GDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVK 229 (499)
Q Consensus 157 ~~~~~~~~~~~~---~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~---~~~~~~i~~~~~t~l~~~P~~l~ 229 (499)
.......+.... +++++.++|++|.+++.. ++.+++.|+++++.+..+.+ ..+++.++++++|++.++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~ 328 (624)
T PRK12582 249 IAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYA 328 (624)
T ss_pred HHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHH
Confidence 665543333333 578999999999999865 77889999999987644433 34677788999999999999999
Q ss_pred HHHccCCCC----cccccceeEEEeecCCCChhhHHHHHhhc----c-cCceeccccccceeeeeecCCCCCCCcccccc
Q 010854 230 AWRNTNCLE----GLDWTKIRSFASTGETSNVDDDLWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFS 300 (499)
Q Consensus 230 ~l~~~~~~~----~~~l~~l~~i~~~G~~l~~~~~~~~~~~~----~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g 300 (499)
.|++..... ..+++++|.+++||+++++++.+++.... . +..+++.||+||++.+...... .....+++|
T Consensus 329 ~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG 407 (624)
T PRK12582 329 MLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW-DTERVGLIG 407 (624)
T ss_pred HHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccC-CCCCCCCCC
Confidence 887643222 23468999999999999999999887642 1 2579999999999875543222 234568999
Q ss_pred ccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEe-e---cCc
Q 010854 301 TATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR-T---VGG 375 (499)
Q Consensus 301 ~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~-~---~~G 375 (499)
+|+||+++++++ .|+ .|||+| ++..+.+ ++.+++.+...| +.++||+|||+|++ | ++|
T Consensus 408 ~p~pg~~v~i~~-------~G~--~GEl~vrg~~v~~G--Y~~~p~~t~~~f------~~dgw~~TGDlg~~~d~~~~~g 470 (624)
T PRK12582 408 LPLPGVELKLAP-------VGD--KYEVRVKGPNVTPG--YHKDPELTAAAF------DEEGFYRLGDAARFVDPDDPEK 470 (624)
T ss_pred cCCCCcEEEEcc-------CCC--ceEEEEECCccccc--ccCCccchhhhc------CccCCccccceEEecCCcCCCC
Confidence 999999999963 455 499999 5554443 333333333333 35789999999998 4 569
Q ss_pred eEEEecccCCeeee-CceeechHHHH--HHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecC----------CC----
Q 010854 376 YIIVQGRADDTMNL-GGIKTSSVEIE--RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK----------GF---- 438 (499)
Q Consensus 376 ~l~~~gR~~d~i~~-~G~~v~~~~iE--~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~----------~~---- 438 (499)
+|+++||.||+|+. +|++|+|.+|| .++. .||.|.+++|++.+++..+ +.|++.. +.
T Consensus 471 ~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~-~~p~V~~a~VvG~~~~~~g-----~lv~p~~~~~~~~~~~~~~~~~~ 544 (624)
T PRK12582 471 GLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAA-CSPVIHDAVVAGQDRAFIG-----LLAWPNPAACRQLAGDPDAAPED 544 (624)
T ss_pred ceEEeccchhhEecCCCcEechHHHHHHHHHh-cCcchheEEEEcCCCCcEE-----EEEecCHHHHHHHHhcCCCCHHH
Confidence 99999999999995 89999999885 5665 8999999999998765443 3333221 11
Q ss_pred CCCHHHHHHHHHHHH---HhhcCCce-eeeEEEEcCCCCC------CCCcHHHHHHHHHHHHhhhhh
Q 010854 439 TSQPDKLKMIFSKAI---QSKLNPLF-KVSLVKVVPEFPR------TASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 439 ~~~~~~l~~~~~~~~---~~~l~~~~-~p~~~~~~~~iP~------t~~GKv~r~~l~~~~~~~~~~ 495 (499)
..+.+++.+++++.+ ++.++.+. +|+++.+++++|+ |++||+.|+.+.+.|++++++
T Consensus 545 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 545 VVKHPAVLAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred HhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 013345666655544 45677777 9999999998774 778899999999999998875
No 112
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=397.42 Aligned_cols=471 Identities=18% Similarity=0.175 Sum_probs=365.5
Q ss_pred CCCCCE-EEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCC
Q 010854 2 FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP 80 (499)
Q Consensus 2 v~~gd~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 80 (499)
++|+++ ++|+.+.+.+|+++.+||++.+..+|.++..+..+.+.+.|++++++.+|++.+++ +.+....+..+
T Consensus 111 ~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL------~kl~~~l~~~~ 184 (678)
T KOG1180|consen 111 LKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELL------PKLKAPLKQAK 184 (678)
T ss_pred CCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHH------HHHHHHHhccC
Confidence 455555 99999999999999999999999999999999999999999999999999999754 34444445555
Q ss_pred CceEEecccCCC-------CC--CCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecch
Q 010854 81 LKAIVLPAIGND-------VG--IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQL 151 (499)
Q Consensus 81 ~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~ 151 (499)
....++..+..+ .+ ........+++++++.+.... ..+.+..++|+|+|||||||||.||||+++|.
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~ 260 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPPKPSDIACIMYTSGSTGLPKGVMLTHS 260 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCCCCCceEEEEEcCCCCCCCceEEEecc
Confidence 555555544311 11 112345678999999887622 33444578999999999999999999999999
Q ss_pred hhHHHhhhcceec-cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCCh-------hHHHHHHHHhCCeEEec
Q 010854 152 SSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE-------RSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~-------~~~~~~i~~~~~t~l~~ 223 (499)
|+++.+....... .+.+.|+++.++|+.|.+-+..=+.+++.|+.+-..++.... ...-..+...|||.+.+
T Consensus 261 NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~ 340 (678)
T KOG1180|consen 261 NIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAA 340 (678)
T ss_pred cHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhh
Confidence 9999988777654 789999999999999999999888888999988876543211 12234567899999999
Q ss_pred chHHHHHHHcc--------------------------CCCCc----------------ccccceeEEEeecCCCChhhHH
Q 010854 224 VPSLVKAWRNT--------------------------NCLEG----------------LDWTKIRSFASTGETSNVDDDL 261 (499)
Q Consensus 224 ~P~~l~~l~~~--------------------------~~~~~----------------~~l~~l~~i~~~G~~l~~~~~~ 261 (499)
+|..++++.+. ..... .--.+||.+++||++++++.++
T Consensus 341 VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQr 420 (678)
T KOG1180|consen 341 VPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQR 420 (678)
T ss_pred hHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHH
Confidence 99999877654 00000 0124799999999999999999
Q ss_pred HHHhhcccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-ccccccccc
Q 010854 262 WLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASD 339 (499)
Q Consensus 262 ~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~ 339 (499)
++-..+ .+++.++||.||+++..+..+..+. ..+.+|.|++.++++++| ++|-=.+.+.|..|||++ ++.... +
T Consensus 421 F~nic~-C~Pv~qGYGLTEtca~~tv~e~~d~-~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~--g 496 (678)
T KOG1180|consen 421 FMNICF-CCPVLQGYGLTETCAAATVLEPEDF-STGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTM--G 496 (678)
T ss_pred HHHHhc-cccccccccccchhcccEecChhhc-ccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccCh--h
Confidence 987665 5699999999999987776665443 446999999999999999 555444444434699999 555444 3
Q ss_pred ccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeee-CceeechHHHHHHHhhcCccceeeeEEEe
Q 010854 340 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISV 418 (499)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v~~~ 418 (499)
++++++.+...|.. .+|.+||+|||+|++.+||.|.+.+|++|++|. +|+.|+++-+|+++. ..|.|...+|++-
T Consensus 497 Y~kn~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~-s~p~V~NICvyAd 572 (678)
T KOG1180|consen 497 YYKNEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALR-SSPYVDNICVYAD 572 (678)
T ss_pred hhCChhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHh-cCcchhheEEecc
Confidence 66677777776652 467779999999999999999999999999995 999999999999996 9999999999876
Q ss_pred CCCCCCceEEEEEEEecCCC----------CC-C------H----HHHHHHHHHHH-HhhcCCceeeeEEEEcCCCCCCC
Q 010854 419 SPAGGGPEVLVIFVVLKKGF----------TS-Q------P----DKLKMIFSKAI-QSKLNPLFKVSLVKVVPEFPRTA 476 (499)
Q Consensus 419 ~~~~~~~~~~~~~v~~~~~~----------~~-~------~----~~l~~~~~~~~-~~~l~~~~~p~~~~~~~~iP~t~ 476 (499)
... ..++++||++++. .. + + +++.+.+.+.- .++|..+.+|..|++.++ |+||
T Consensus 573 ~~~----s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e-~WTP 647 (678)
T KOG1180|consen 573 SNK----SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPE-PWTP 647 (678)
T ss_pred ccc----ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCC-CcCC
Confidence 543 6789999998632 11 1 0 11222222222 568999999999999876 7655
Q ss_pred -Cc------HHHHHHHHHHHHhhhhh
Q 010854 477 -SN------KLLRRVLRDQIKHELSV 495 (499)
Q Consensus 477 -~G------Kv~r~~l~~~~~~~~~~ 495 (499)
+| |+.|+.++..|+++++.
T Consensus 648 enGlvT~A~KLKRk~I~~~~k~ei~~ 673 (678)
T KOG1180|consen 648 ENGLVTAALKLKRKEILAAYKKEIDR 673 (678)
T ss_pred CccccHHHHHhhHHHHHHHHHHHHHH
Confidence 44 99999999999998875
No 113
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-52 Score=433.94 Aligned_cols=444 Identities=19% Similarity=0.198 Sum_probs=333.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCC-------HHHHHHHhhcCCeeEEEecccccccCccccchhh
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA-------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSK 74 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 74 (499)
+++||+|+++++|++++++++|||+++|++++|+++..+ .+++.++++.++++++|+++... +.+..
T Consensus 71 i~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~------~~~~~ 144 (579)
T PRK09192 71 LKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELL------PWVNE 144 (579)
T ss_pred CCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHH------HHHHH
Confidence 689999999999999999999999999999999986432 68999999999999999987532 11111
Q ss_pred hhhcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 75 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
...... .. ...++.++...... ........++++++++|||||||.||+|.++|+++.
T Consensus 145 ~~~~~~-~~----------------~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~ 202 (579)
T PRK09192 145 ATHGNP-LL----------------HVLSHAWFKALPEA-----DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALM 202 (579)
T ss_pred hhcccc-cc----------------ceeehhhhcccCCC-----ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHH
Confidence 110000 00 11123333221111 111123456899999999999999999999999999
Q ss_pred HHhhhcce-eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEecchHHHH
Q 010854 155 RCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVK 229 (499)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~ 229 (499)
..+..... .++++++|+++.++|++|.+++.. ++.++..|+++++.+.. ..+..+++.+.+++++.++..|.++.
T Consensus 203 ~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~ 282 (579)
T PRK09192 203 ANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYE 282 (579)
T ss_pred HHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHH
Confidence 88877766 788999999999999999999886 77788899998776521 14678999999999998777665555
Q ss_pred HHHccC---CCCcccccceeEEEeecCCCChhhHHHHHhhccc-----CceeccccccceeeeeecCCCCCC--------
Q 010854 230 AWRNTN---CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY-----NAIIESCGGTELSSAYIQGSLLQP-------- 293 (499)
Q Consensus 230 ~l~~~~---~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~-----~~i~~~yg~tE~~~~~~~~~~~~~-------- 293 (499)
.+.... .....+++++|.++++|+.+++.+.+.+...+.. ..+++.||+||++..+........
T Consensus 283 l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~ 362 (579)
T PRK09192 283 LCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDR 362 (579)
T ss_pred HHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcH
Confidence 444322 1233568899999999999999998888766531 358999999999765543322110
Q ss_pred -------------------CccccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcC
Q 010854 294 -------------------QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRG 353 (499)
Q Consensus 294 -------------------~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~ 353 (499)
....++|.|+|+++++|+|+++.+++.++ +|||++ ++..+.+ ++.+ ..+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~--~Gel~i~g~~~~~g--Y~~~-~~~~~~--- 434 (579)
T PRK09192 363 DRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERV--VGHICVRGPSLMSG--YFRD-EESQDV--- 434 (579)
T ss_pred HHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCC--EEEEEecCCchhhh--hcCC-cccccc---
Confidence 11357899999999999999999999988 699999 5544432 2222 221111
Q ss_pred CCCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccce--eeeEEEeCCCCCCceEEEEE
Q 010854 354 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL--ETAAISVSPAGGGPEVLVIF 431 (499)
Q Consensus 354 ~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~--~~~v~~~~~~~~~~~~~~~~ 431 (499)
...++||+|||+|++ ++|+++++||.+|+||++|++|+|.+||++|. .||+|. ++++++++++. + +.++++
T Consensus 435 ---~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~p~V~~~~~~v~~~~~~~-~-~~~~~~ 507 (579)
T PRK09192 435 ---LAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAE-QEPELRSGDAAAFSIAQEN-G-EKIVLL 507 (579)
T ss_pred ---ccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHH-hcCCccCCcEEEEEeccCC-C-eeEEEE
Confidence 234679999999999 99999999999999999999999999999996 899998 88999988874 4 578888
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC--CCCCCCCcHHHHHHHHHHHHh
Q 010854 432 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP--EFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 432 v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~--~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++...+...+.+++.+++++.+. ..+..|..+++++ +||+|++||++|++|++++..
T Consensus 508 v~~~~~~~~~~~~l~~~~~~~l~---~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~ 566 (579)
T PRK09192 508 VQCRISDEERRGQLIHALAALVR---SEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLS 566 (579)
T ss_pred EEecCCChHHHHHHHHHHHHHHH---HHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHc
Confidence 87765544455566666655442 2356776677774 899999999999999998865
No 114
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-51 Score=426.06 Aligned_cols=452 Identities=18% Similarity=0.181 Sum_probs=319.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCC---CCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA 79 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 79 (499)
++||+|+++++|++++++++|||+++|++++|+++ ..+.+++.+++++++++++++++.... .+.......
T Consensus 57 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~ 130 (578)
T PRK05850 57 STGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQ 130 (578)
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhc
Confidence 47999999999999999999999999999999997 457899999999999999999875431 111111100
Q ss_pred C--CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHh
Q 010854 80 P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT 157 (499)
Q Consensus 80 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~ 157 (499)
. ....++..... ++ ... ..........+++++++|||||||.||||.++|+++...+
T Consensus 131 ~~~~~~~~~~~~~~--------------~~---~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~ 189 (578)
T PRK05850 131 PGQSAPPVIEVDLL--------------DL---DSP----RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANF 189 (578)
T ss_pred ccccccceEeeccc--------------cc---ccC----CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHH
Confidence 0 00001100000 00 000 0001123456899999999999999999999999998776
Q ss_pred hhccee-cc-----CcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEecchHH
Q 010854 158 AEGWAH-ID-----LKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 158 ~~~~~~-~~-----~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
...... +. ...++++++++|++|.++++. ++.+++.|+++++.++. .++..+++.+++++++++ .+|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~ 268 (578)
T PRK05850 190 EQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNF 268 (578)
T ss_pred HHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcH
Confidence 544322 11 356789999999999999876 89999999999988642 257889999999999865 45655
Q ss_pred HH-HHHccC---CCCcccccceeEEEeecCCCChhhHHHHHhhcc-----cCceeccccccceeeeeecCCCCCC-----
Q 010854 228 VK-AWRNTN---CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP----- 293 (499)
Q Consensus 228 l~-~l~~~~---~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yg~tE~~~~~~~~~~~~~----- 293 (499)
+. .+.... .....+++++|.+++||+++++++.+++...+. +..+++.||+||++..+........
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 348 (578)
T PRK05850 269 AFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVR 348 (578)
T ss_pred HHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEE
Confidence 43 333221 112346789999999999999999888877653 2468999999998754332211100
Q ss_pred -------------------CccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-cccccccccccccccccchhhc
Q 010854 294 -------------------QAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFR 352 (499)
Q Consensus 294 -------------------~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~ 352 (499)
....++|.|. +.+++++| +++.+++.|+ .|||+| ++..+.+ ++.+++.+...|.
T Consensus 349 ~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~f~ 423 (578)
T PRK05850 349 FDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGT--VGEIWVHGDNVAAG--YWQKPEETERTFG 423 (578)
T ss_pred ECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCC--EEEEEEecCccccc--ccCChhhhHHHhh
Confidence 0011334443 57899999 6688999998 599999 6555443 3445555554553
Q ss_pred CC---C--CCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceE
Q 010854 353 GM---P--MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 427 (499)
Q Consensus 353 ~~---~--~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~ 427 (499)
.. + ....++||+|||+|+++ +|+++++||.||+||++|++|+|.+||++|. .|+.+ ++++++++++ .+ +.
T Consensus 424 ~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~v~~v~~~-~~-~~ 498 (578)
T PRK05850 424 ATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVAAISVPDD-GT-EK 498 (578)
T ss_pred cccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEEEEEecCC-Cc-eE
Confidence 10 0 01134799999999998 9999999999999999999999999999997 88885 5788888876 55 88
Q ss_pred EEEEEEecCCCCCCHHH--HHHHHHHHHHhhcCCc--eeeeEEEEcC--CCCCCCCcHHHHHHHHHHHHhh
Q 010854 428 LVIFVVLKKGFTSQPDK--LKMIFSKAIQSKLNPL--FKVSLVKVVP--EFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 428 ~~~~v~~~~~~~~~~~~--l~~~~~~~~~~~l~~~--~~p~~~~~~~--~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
++++|+.+++...+.++ ....+++.+...+..+ ..|..+++++ +||+|++||++|++|++.|.+.
T Consensus 499 ~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 499 LVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred EEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 99999988765433332 2334444444444322 2455666664 8999999999999999998764
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-50 Score=415.74 Aligned_cols=440 Identities=19% Similarity=0.154 Sum_probs=324.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHH-------HHHHhhcCCeeEEEecccccccCccccchhh
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE-------IATRLRVSKAKGIFTQDFILRGGRKFPLYSK 74 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 74 (499)
+++||+|+++++|+++++++++||+++|++++|+++..+.++ ...+++.++++.+++++..... ..
T Consensus 51 ~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~- 123 (545)
T PRK07768 51 VGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAA------AP- 123 (545)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhh------hh-
Confidence 689999999999999999999999999999999998877544 4556888899999997743210 00
Q ss_pred hhhcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 75 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
..... ......++++...... ......++++++++|||||||.||+|+++|+++.
T Consensus 124 ~~~~~------------------~~~~~~~~~l~~~~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~ 178 (545)
T PRK07768 124 VLEEK------------------GIRVLTVADLLAADPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLY 178 (545)
T ss_pred hhccc------------------CCceeehhhhcccCCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHH
Confidence 00000 0112344444432111 1223457999999999999999999999999999
Q ss_pred HHhhhcceeccCcCC-cEEEeecCccccchhhh-hhhhhccCcEEEecCCC---CChhHHHHHHHHhCCeEEecchHHHH
Q 010854 155 RCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVK 229 (499)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~ 229 (499)
..+......+++..+ |++++.+|++|.+++.. ++.++..|+++++.++. .++..+.+.+++++++.+.+.|.++.
T Consensus 179 ~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 258 (545)
T PRK07768 179 ANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYA 258 (545)
T ss_pred HHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHH
Confidence 888777777777776 89999999999999876 77889999999887642 14667889999999999988887776
Q ss_pred HHHccC----CCCcccccceeEEEeecCCCChhhHHHHHhh---cc--cCceeccccccceeeeeecCCCCC--------
Q 010854 230 AWRNTN----CLEGLDWTKIRSFASTGETSNVDDDLWLSSK---AW--YNAIIESCGGTELSSAYIQGSLLQ-------- 292 (499)
Q Consensus 230 ~l~~~~----~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~---~~--~~~i~~~yg~tE~~~~~~~~~~~~-------- 292 (499)
.+.+.. .....+++++|.++++|+++++...+++.+. +. ...+++.||+||++..+.......
T Consensus 259 ~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 338 (545)
T PRK07768 259 LLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVD 338 (545)
T ss_pred HHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeec
Confidence 655432 1224667899999999999999998887653 21 235999999999987554322110
Q ss_pred -----------------CCccccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCC
Q 010854 293 -----------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGM 354 (499)
Q Consensus 293 -----------------~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~ 354 (499)
....+++|.|+++++++++|+++++++.|+ .||+++ ++..+.++. +.... .
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~--~Gel~v~~~~~~~gy~---~~~~~------~ 407 (545)
T PRK07768 339 ADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVDEDGQVLPPRG--VGVIELRGESVTPGYL---TMDGF------I 407 (545)
T ss_pred hhHhhccCceeccCCCCcceEEeccCCCCCCEEEEECCCCCCCCCCC--EEEEEEccCccccccc---CCCCC------c
Confidence 113468899999999999999999999998 599999 443333211 11100 1
Q ss_pred CCCCCccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCC--CCCCceEEEEEE
Q 010854 355 PMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP--AGGGPEVLVIFV 432 (499)
Q Consensus 355 ~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~--~~~~~~~~~~~v 432 (499)
+....++||+|||+++++++|+++++||.+|+++.+|.+|+|.+||+++. .+|+|.+++|+++.. ...+ +...+++
T Consensus 408 ~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~~~~-~~~~~~v 485 (545)
T PRK07768 408 PAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLDAGHSR-EGFAVAV 485 (545)
T ss_pred ccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHH-hCcccccceEEEEEecCCCCc-eEEEEEE
Confidence 11234579999999999999999999999999999999999999999996 899999988776653 3333 4555555
Q ss_pred EecCCCCCCHH---HHHHHHHHHHHhhcCCceeeeEEEEcC--CCCCCCCcHHHHHHHHHHHH
Q 010854 433 VLKKGFTSQPD---KLKMIFSKAIQSKLNPLFKVSLVKVVP--EFPRTASNKLLRRVLRDQIK 490 (499)
Q Consensus 433 ~~~~~~~~~~~---~l~~~~~~~~~~~l~~~~~p~~~~~~~--~iP~t~~GKv~r~~l~~~~~ 490 (499)
...... +.. ++.+++++.+...+. ..|..+.+++ +||+|++||++|+.++++|.
T Consensus 486 ~~~~~~--~~~~~~~l~~~~~~~l~~~~~--~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 486 ESNAFE--DPAEVRRIRHQVAHEVVAEVG--VRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred Eecccc--cHHHHHHHHHHHHHHHHHHhC--CCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 443321 222 344444443333222 5677787776 89999999999999999875
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-50 Score=375.73 Aligned_cols=462 Identities=20% Similarity=0.173 Sum_probs=354.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCC-
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP- 80 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~- 80 (499)
++.||+|+++|+|+++|+...|+++++|++...||+.+.-+.+.|.++.++++++|++++++. ...++.+...
T Consensus 126 l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~ 199 (649)
T KOG1179|consen 126 LKAGDVVALLMENRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIK 199 (649)
T ss_pred cccCCEEEEecCCChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhh
Confidence 688999999999999999999999999999999999999999999999999999999997642 2223322221
Q ss_pred CceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc
Q 010854 81 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 160 (499)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~ 160 (499)
....++..+... ...+..++...++.....+.+ .......+-.++++.+|||||||.||+.+++|..+...+...
T Consensus 200 ~~i~~~~~~~~~----~~~g~~~L~~~l~~~~~~~vp-~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~ 274 (649)
T KOG1179|consen 200 NGIHVFSLGPTS----VPDGIESLLAKLSAAPKHPVP-VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGF 274 (649)
T ss_pred ccceEEecCCCC----CCchHHHHHHhhcccccCCCC-cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 223333222111 122333333333333331211 122344667789999999999999999999999988888877
Q ss_pred ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 161 WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 161 ~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
...++++++|+++.++|++|+++.+. +..++..|+++++-. .++...+++.+.+++||+..-+..+.+.|++.+..+.
T Consensus 275 ~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~ 353 (649)
T KOG1179|consen 275 YYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPE 353 (649)
T ss_pred HHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChh
Confidence 78899999999999999999999876 999999999999986 7889999999999999999999999999999987766
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCCCcccccccc-------CCCceEEEEC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA-------TMTAGLVILD 312 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~-------~~~~~~~i~d 312 (499)
..-..+|..+-.| +.+++++.|..++...++.+.||+||...... +. ....+.+|.. .|..-++.-.
T Consensus 354 er~HkVRla~GNG--LR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~-N~---d~~vGA~G~~~~~~~~l~p~~LIk~D~ 427 (649)
T KOG1179|consen 354 ERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIGEFYGATEGNSNLV-NY---DGRVGACGFMSRLLKLLYPFRLIKVDP 427 (649)
T ss_pred hcCceEEEEecCC--CCchHHHHHHHHcCCCeEEEEeccccCcceee-ee---cCccccccchhhhhhhccceEEEEecC
Confidence 6567888886666 77999999999997778999999999776433 22 2334444431 1222223222
Q ss_pred CCCCC----------CCCCCCcceeeEecccccccc----ccccc-ccccchhhcCCCCCCCccccccCceeEeecCceE
Q 010854 313 ECGVP----------YPDDQPCVGEVGLFPLYLGAS----DRLLN-ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYI 377 (499)
Q Consensus 313 ~~g~~----------~~~g~~~~Gei~v~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l 377 (499)
++|++ |++|++ |.+. +.-....| ..+.+ ...++.....+-+.+||.||+|||+..+|+.|++
T Consensus 428 ~t~E~iRd~~G~Ci~~~~GEp--GlLv-~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~Gyl 504 (649)
T KOG1179|consen 428 ETGEPIRDSQGLCIPCPPGEP--GLLV-GKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYL 504 (649)
T ss_pred CCCceeecCCceEEECCCCCC--ceEE-EEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcE
Confidence 55554 455554 5322 21111111 22222 3444444444566789999999999999999999
Q ss_pred EEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 010854 378 IVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 457 (499)
Q Consensus 378 ~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l 457 (499)
||.+|..|++..+|+||++.|||++|. ...++.|+.|+++.-+..+...-+|.|+..++...+.+.+.++ +.+.|
T Consensus 505 YF~DRtGDTFRWKGENVsTtEVe~~l~-~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~----l~~~L 579 (649)
T KOG1179|consen 505 YFKDRTGDTFRWKGENVSTTEVEDVLS-ALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQH----LRENL 579 (649)
T ss_pred EEeccCCCceeecCCcccHHHHHHHHh-hhccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHH----HHhhC
Confidence 999999999999999999999999995 8999999999999877665466788888888777777666666 55689
Q ss_pred CCceeeeEEEEcCCCCCCCCcHHHHHHHHHHH
Q 010854 458 NPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 489 (499)
Q Consensus 458 ~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~ 489 (499)
++|-+|.-+.++++|++|.+-|..+..|.+..
T Consensus 580 P~YA~P~FlRl~~~i~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 580 PSYARPRFLRLQDEIEKTGTFKLQKTELQKEG 611 (649)
T ss_pred ccccchHHHHHHhhhhcccchhhHHHHHHHcc
Confidence 99999999999999999999999999887643
No 117
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=7.4e-48 Score=382.65 Aligned_cols=378 Identities=20% Similarity=0.188 Sum_probs=301.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++.+++++......... ..
T Consensus 22 ~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~----------~~ 91 (408)
T TIGR01733 22 VGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRLAGL----------VL 91 (408)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhcccc----------CC
Confidence 68899999999999999999999999999999999999999999999999999999988643211111 00
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+.. .+......... ..........+++++++|||||||.||+|.++|+++...+....
T Consensus 92 ~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~ 153 (408)
T TIGR01733 92 PIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLA 153 (408)
T ss_pred ceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHH
Confidence 1111100 00000000000 00111114578999999999999999999999999999888888
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCC--hhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+.++++|+++...|++|.+++..++.++..|+++++.+.... +..+.+.++++++|.+.++|++++.|.+...
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~--- 230 (408)
T TIGR01733 154 RRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP--- 230 (408)
T ss_pred HhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---
Confidence 88888999999999999999998889999999999999876554 6789999999999999999999999988754
Q ss_pred ccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCC--CCCC--ccccccccCCCceEEEECCCC
Q 010854 240 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQPQ--AFGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 240 ~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~--~~~~--~~~~~g~~~~~~~~~i~d~~g 315 (499)
.+++++|.++++|+++++++.+.+.+.+.+..+++.||+||++..+..... .... ...++|+|+++++++|+|+++
T Consensus 231 ~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~ 310 (408)
T TIGR01733 231 PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDL 310 (408)
T ss_pred hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCCC
Confidence 557899999999999999999999988866889999999999876642211 1111 267899999999999999889
Q ss_pred CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCcc--ccccCceeEeecCceEEEecccCCeeeeCce
Q 010854 316 VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMC--LRRHGDIIKRTVGGYIIVQGRADDTMNLGGI 392 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~ 392 (499)
++++.|+ .||+++ ++..+.+ ++.+++.+...+...+....++ ||+|||++++|++|++++.||.+|+++.+|+
T Consensus 311 ~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~ 386 (408)
T TIGR01733 311 RPVPVGV--VGELYIGGPGVARG--YLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGY 386 (408)
T ss_pred CCCCCCC--ceEEEecCcccccc--ccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeE
Confidence 9999998 599999 5444432 2233333443444333333333 9999999999999999999999999999999
Q ss_pred eechHHHHHHHhhcCccceeeeE
Q 010854 393 KTSSVEIERVCDQADESILETAA 415 (499)
Q Consensus 393 ~v~~~~iE~~l~~~~~~v~~~~v 415 (499)
+|+|.+||+++. .+++|.+++|
T Consensus 387 ~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 387 RIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred EechHHHHHHHh-cCcchhhhcC
Confidence 999999999996 8999988764
No 118
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.4e-45 Score=356.35 Aligned_cols=322 Identities=18% Similarity=0.168 Sum_probs=259.9
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEe--cCC
Q 010854 125 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLAL--YQG 202 (499)
Q Consensus 125 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~--~~~ 202 (499)
..++++++++|||||||.||+|+++|+++...+...... +...++.+..+|++|.+++..++.+++.|+++++ .+.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 346899999999999999999999999998877655443 3355678889999999998888889999999888 344
Q ss_pred CCChhHHHHHHHHhC--CeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccc
Q 010854 203 SPLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 280 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~--~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE 280 (499)
.+++..+++.+++++ .++...+|..+..++.... ...++++++.++++|+.+++++.+++.. . +.++++.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEecccCCc
Confidence 567889999999998 5667778888887766543 2345789999999999999999888764 3 788999999999
Q ss_pred eeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCC
Q 010854 281 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKG 359 (499)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (499)
++..+ ...|.|++++++++.| ||+++ ++..+.++ +.+.. .. ....
T Consensus 187 ~~~~~-----------~~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY--~~~~~-~~-------~~~~ 232 (358)
T PRK07824 187 TSGGC-----------VYDGVPLDGVRVRVED-------------GRIALGGPTLAKGY--RNPVD-PD-------PFAE 232 (358)
T ss_pred cCCCc-----------CcCceeCCCCEEEecC-------------CEEEEecCcccccc--CCCcc-cc-------cccC
Confidence 87532 1357899999999843 77777 44333321 11111 11 1123
Q ss_pred ccccccCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCC
Q 010854 360 MCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT 439 (499)
Q Consensus 360 ~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~ 439 (499)
++||+|||++++ .+|++++.||.||+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++++...+..
T Consensus 233 ~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~~~~~ 309 (358)
T PRK07824 233 PGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGDGGPA 309 (358)
T ss_pred CCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeCCCCC
Confidence 469999999999 89999999999999999999999999999996 8999999999999988888 88999998776555
Q ss_pred CCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhh
Q 010854 440 SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 492 (499)
Q Consensus 440 ~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~ 492 (499)
.+.+++.++ +++.|+.|+.|..++++++||+|++||++|++|+++|.++
T Consensus 310 ~~~~~i~~~----~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 358 (358)
T PRK07824 310 PTLEALRAH----VARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAGE 358 (358)
T ss_pred cCHHHHHHH----HHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhcC
Confidence 555555544 6678899999999999999999999999999999998753
No 119
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5e-46 Score=370.51 Aligned_cols=360 Identities=24% Similarity=0.256 Sum_probs=265.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCcccc--chhhhhhcC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFP--LYSKVLGAA 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~ 79 (499)
+++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++|+ .+.. +... .+.......
T Consensus 43 ~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~~~~~~~~~~~~~~ 118 (417)
T PF00501_consen 43 VKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT-SEAV---DSEPLKKLKSIFKQE 118 (417)
T ss_dssp SSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE-CHHH---SCHHHHHHHHHHTTS
T ss_pred CCccccccccCCccceeeeeecccccccccccccccccccccccccccccceeEEEE-eccc---cccccccchhhhccc
Confidence 689999999999999999999999999999999999999999999999999999997 1000 0111 111122211
Q ss_pred CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCC-CCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 80 PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
.....++..... .....+.+....... ... .. ..++++++++|||||||.||+|.++|+++.+.+.
T Consensus 119 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 185 (417)
T PF00501_consen 119 DPSSSIIILDRD--------DLPKKEALKSASLSD-EPQ----SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQAR 185 (417)
T ss_dssp TTTEEEEEESHS--------SCTTCHHHHHHHHCH-CSH----STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHH
T ss_pred cccccccccccc--------ccccccccccccccc-ccc----cCCCCccceeEeecccccccccccccccccccccccc
Confidence 122222211111 111111111110000 000 00 0569999999999999999999999999998877
Q ss_pred hcc--eeccCcCCcEEEeecCccccchh-hhhhhhhccCcEEEecCCCCC--hhHHHHHHHHhCCeEEecchHHHHHHHc
Q 010854 159 EGW--AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRN 233 (499)
Q Consensus 159 ~~~--~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 233 (499)
... ..++++ |++++.+|++|.+++ ..++.+++.|+++++.+.... ++.+++.++++++|++.++|++++.+++
T Consensus 186 ~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~ 263 (417)
T PF00501_consen 186 ALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQ 263 (417)
T ss_dssp HHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHH
T ss_pred ccccccccccC--ceEEeeccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccccc
Confidence 754 112223 699999999999999 569999999999999985432 4678999999999999999999999988
Q ss_pred cCCCC----cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCC-CCCCCccccccccCCCceE
Q 010854 234 TNCLE----GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGL 308 (499)
Q Consensus 234 ~~~~~----~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~-~~~~~~~~~~g~~~~~~~~ 308 (499)
..+.. ..+++++|.++++|+++++++.+.+++.++...+++.||+||++.+++... .......+++|.|+|++++
T Consensus 264 ~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 343 (417)
T PF00501_consen 264 SPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEV 343 (417)
T ss_dssp HHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEE
T ss_pred cccccccccccccccccccccccccCChhhccccccccccccceecccccccceeeeccccccccccccccccccccccc
Confidence 43222 357889999999999999999999998875558999999999998876443 2233466789999999999
Q ss_pred EEECCC-CCCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCe
Q 010854 309 VILDEC-GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDT 386 (499)
Q Consensus 309 ~i~d~~-g~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~ 386 (499)
+|+|++ +++++.|+ .|||++ ++..+.+ ++.+++.+...|. .++||+|||+|++|++|+++++||.||+
T Consensus 344 ~ivd~~~~~~~~~g~--~Gei~i~~~~~~~g--y~~~~~~~~~~~~------~~~~~~TGD~g~~d~~G~~~~~GR~~~~ 413 (417)
T PF00501_consen 344 KIVDPNTGEPLPPGE--PGEIVIRGPNVFSG--YYNDPELTAEAFI------DDGWYRTGDLGRLDEDGYLYILGRSDDM 413 (417)
T ss_dssp EEECTTTSSBESTTS--EEEEEEESTTSBSE--ETTBHHHHHHHEE------TTSEEEEEEEEEEETTSEEEEEEEGSCE
T ss_pred ccccccccccccccc--cccccccCCcccee--eeccccccccccc------cccceecceEEEECCCCeEEEEEeeCCE
Confidence 999966 99999999 499999 5544432 2223334444443 1469999999999999999999999999
Q ss_pred eeeC
Q 010854 387 MNLG 390 (499)
Q Consensus 387 i~~~ 390 (499)
||++
T Consensus 414 i~~~ 417 (417)
T PF00501_consen 414 IKVR 417 (417)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9974
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1e-40 Score=360.79 Aligned_cols=430 Identities=14% Similarity=0.077 Sum_probs=298.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
|++||+|+|+++|+++|+++.+||+++|++.+|+++ +.+++.+++++++++++|++.... ..+..+... ..
T Consensus 479 V~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~-~L 549 (1452)
T PTZ00297 479 VRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSR-KL 549 (1452)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhccc-CC
Confidence 789999999999999999999999999999999975 467999999999999999987533 222222211 22
Q ss_pred ceEEecccCCCCC---C--CCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEe---cCCCCCCCceEEecchhh
Q 010854 82 KAIVLPAIGNDVG---I--PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSS 153 (499)
Q Consensus 82 ~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~---TSGtTG~pk~v~~s~~~~ 153 (499)
..++......+.. . .......+|++++..+...+ .......+++|++.|+| ||||||.||||++||+++
T Consensus 550 r~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~~~---~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nl 626 (1452)
T PTZ00297 550 ETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRLCP---VPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADV 626 (1452)
T ss_pred cEEEEECCCcccccccccccCCcceeeHHHHHhcCcccC---ccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHH
Confidence 2222222110000 0 00112467889887653211 11123346889999996 999999999999999999
Q ss_pred HHHhhhcceec---cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 154 IRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 154 ~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
+..+....... ...++|+++.++|++|.++....+.+++.|+++.. ++++.+++.|++++||++.++|.+++.
T Consensus 627 la~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ek 702 (1452)
T PTZ00297 627 LRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFST 702 (1452)
T ss_pred HHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHH
Confidence 98887765322 35678999999999999997677788999999864 357899999999999999999999987
Q ss_pred HHccCCCC--------------------------ccc----------------ccceeEEEeecC--CCChhhHHHHHhh
Q 010854 231 WRNTNCLE--------------------------GLD----------------WTKIRSFASTGE--TSNVDDDLWLSSK 266 (499)
Q Consensus 231 l~~~~~~~--------------------------~~~----------------l~~l~~i~~~G~--~l~~~~~~~~~~~ 266 (499)
+.+....+ +.. -.++|.+++||. .++.. ...
T Consensus 703 I~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~-----l~~ 777 (1452)
T PTZ00297 703 SRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFS-----LLE 777 (1452)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChH-----HhC
Confidence 75431000 000 146888888873 33322 212
Q ss_pred cccCceeccccccceeeeeecCCCCCCCccccccccCCCceEEEECCCCCCCCCCCCcceeeEecccccccccccccccc
Q 010854 267 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADH 346 (499)
Q Consensus 267 ~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~ 346 (499)
+..++..||.||+.. .+.... ....|.|+|+++++|.+....-..+. .||++++ +.+ +++
T Consensus 778 --~i~i~~g~glTE~~~---~~~~~~---~~~~G~PlpgvEvKI~~~~E~~~~~~---~GEIlvr--~~k------dpe- 837 (1452)
T PTZ00297 778 --HISVCYVPCLREVFF---LPSEGV---FCVDGTPAPSLQVDLEPFDEPSDGAG---IGQLVLA--KKG------EPR- 837 (1452)
T ss_pred --CceEEEecceEEeee---ecCCCC---cccCCeecCceEEEEcccccccCCCC---CCeEEEE--ECC------ChH-
Confidence 466888999999542 222221 22349999999999987321111222 4999983 112 222
Q ss_pred cchhhcCCCCCCCccccccCce-eEeecCceEEEecccCCeee-eCceeechHHHHHHHhhcCccceeeeEEEeCCCCCC
Q 010854 347 EEVYFRGMPMYKGMCLRRHGDI-IKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 424 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~TGD~-~~~~~~G~l~~~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~ 424 (499)
.|++. +.|++||+|+|.||+||+|| .+|++|+|+.||+.+. .+|.|..++|++-..
T Consensus 838 -----------------~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~-~sp~I~qi~V~Gd~~---- 895 (1452)
T PTZ00297 838 -----------------RTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFS-QSRYVNDIFLYADPS---- 895 (1452)
T ss_pred -----------------HHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHh-cCCCccEEEEEecCC----
Confidence 22222 24557999999999999999 5999999999999996 899999999997653
Q ss_pred ceEEEEEEEecCCCC-------------------CCHHHHHH----HHHHH---H--HhhcCCceeeeEEEEcC-CC---
Q 010854 425 PEVLVIFVVLKKGFT-------------------SQPDKLKM----IFSKA---I--QSKLNPLFKVSLVKVVP-EF--- 472 (499)
Q Consensus 425 ~~~~~~~v~~~~~~~-------------------~~~~~l~~----~~~~~---~--~~~l~~~~~p~~~~~~~-~i--- 472 (499)
..++|+|+++...- .+..++.+ .+.+. + .+.+..+++++.+++++ ++
T Consensus 896 -k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~e 974 (1452)
T PTZ00297 896 -RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDH 974 (1452)
T ss_pred -CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCC
Confidence 44888888764111 02233322 12221 2 12356677887777764 44
Q ss_pred --CCCCCcHHHHHHHHHHHHhhhhh
Q 010854 473 --PRTASNKLLRRVLRDQIKHELSV 495 (499)
Q Consensus 473 --P~t~~GKv~r~~l~~~~~~~~~~ 495 (499)
-+|++.|+.|+.+.+.|++++++
T Consensus 975 nGlLTPTlKlKR~~I~~kY~~~Ie~ 999 (1452)
T PTZ00297 975 STFLTPYGKIRRDAVHSYFSSVIER 999 (1452)
T ss_pred CCcCChhhhhhHHHHHHHHHHHHHH
Confidence 36999999999999999998875
No 121
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=3.5e-40 Score=319.07 Aligned_cols=289 Identities=14% Similarity=0.130 Sum_probs=226.3
Q ss_pred CCeEEEEecCCCCCCCceEEecchhhHHHhhhcceeccCcC--CcEEEeecCccccchhhh-hhhhhccCcEEEecCCCC
Q 010854 128 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSP 204 (499)
Q Consensus 128 ~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~~~~~~--~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~ 204 (499)
+..++++|||||||.||+|+++|+++...+......++++. .++++..+|++|.+++.. ++.++..|+++++.+ .+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 56889999999999999999999999888877766666643 468999999999999765 788899999999886 45
Q ss_pred ChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeee
Q 010854 205 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 284 (499)
Q Consensus 205 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~ 284 (499)
++..+++.++.+ |++.++|++++.+.+.. .++++++. +++|+++++++.+.+... ....+++.||+||++++
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 667777777643 89999999999997752 34667775 678999999999888764 22469999999999875
Q ss_pred eecCCCCCCCccccccccCCCceEEEECCCCCCCCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccc
Q 010854 285 YIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRR 364 (499)
Q Consensus 285 ~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (499)
..... .+..+.+.|+.++.+ + ++. +. + ...|++
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~~----------~~------------------------g-----~~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TLS----------SA------------------------G-----LARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Ccc----------CC------------------------C-----ccceee
Confidence 43221 123456666655432 1 110 00 0 012579
Q ss_pred cCceeEeecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHH
Q 010854 365 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDK 444 (499)
Q Consensus 365 TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 444 (499)
|||++++|++|+++++||.||+||++|++|+|.+||+++. .||+|.+++|+. .+ +++.++|++.++. +.+.
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~~~--~~~~ 349 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAEDA--DEAE 349 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECCCC--ChHH
Confidence 9999999999999999999999999999999999999997 899999998852 24 7889999987543 2334
Q ss_pred HHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHH
Q 010854 445 LKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLL 481 (499)
Q Consensus 445 l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~ 481 (499)
+.+.+++++.++|+.|+.|..+.++++||+|++||++
T Consensus 350 ~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 350 LEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 5566777788899999999999999999999999974
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=3.6e-36 Score=298.64 Aligned_cols=327 Identities=19% Similarity=0.176 Sum_probs=237.2
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHhhh---cceeccCcCCcEEEeecCccccchhh-hhhhhhccCcEEEec
Q 010854 125 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATLALY 200 (499)
Q Consensus 125 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~ 200 (499)
.+.++++.+++||||||.||++.++|.++...... ....++++++|++++..+..+..+.. ..+.+...|++++.+
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 35578899999999999999999999987654332 23346788999988766655433333 356678889999877
Q ss_pred CCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCccc--ccceeEEEeecCCCChhhHHHHHhhcccCceeccccc
Q 010854 201 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD--WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 278 (499)
Q Consensus 201 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~ 278 (499)
+. ..++.+++.|++++||++.++|+++..|++.....+.+ ..++|.++++||++++++.+.+.+.+ ++++++.||+
T Consensus 152 ~~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~ 229 (422)
T TIGR02155 152 SG-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGL 229 (422)
T ss_pred CC-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccc
Confidence 64 35688999999999999999999999988754433332 35899999999999999998887766 7899999999
Q ss_pred cceee--eeecCCCCCCCccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEecccccccccccccccccchhhcCCC
Q 010854 279 TELSS--AYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 355 (499)
Q Consensus 279 tE~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (499)
||+++ +...+... ..+ ...+.++..++|+| ++|+++++|+. |||+++..... . .|
T Consensus 230 tE~~~~~~~~~~~~~---~~g-~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt~~~~~-------------~---~p 287 (422)
T TIGR02155 230 SEVIGPGVAMECVET---QDG-LHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFTTLTKE-------------A---LP 287 (422)
T ss_pred hhhcCCceeeccccc---CCC-ceEecCeeEEEEECCCCCCCCCCCCe--eEEEEecCCcc-------------c---cc
Confidence 99852 22222111 111 11223467788999 68999999994 99999532111 1 11
Q ss_pred CCCCccccccCceeEeecC-c-----eEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEE
Q 010854 356 MYKGMCLRRHGDIIKRTVG-G-----YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 429 (499)
Q Consensus 356 ~~~~~~~~~TGD~~~~~~~-G-----~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~ 429 (499)
..||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||+++. .+|+|...+.+........ +.+.
T Consensus 288 ----~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~~ 361 (422)
T TIGR02155 288 ----VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DELT 361 (422)
T ss_pred ----eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEEE
Confidence 247999999999876 4 46899999999999999999999999996 8999985555555544333 5677
Q ss_pred EEEEecCCCC-----CCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHH
Q 010854 430 IFVVLKKGFT-----SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRR 483 (499)
Q Consensus 430 ~~v~~~~~~~-----~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~ 483 (499)
+.|+...+.. .+.+.+.+.+++.+++.+..+.. ..++.+++||+|+ ||++|.
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 7777664332 12234456677777777766431 3344457999988 998763
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-32 Score=287.05 Aligned_cols=362 Identities=22% Similarity=0.236 Sum_probs=282.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
++++++|+++++.+++++++++|++++|+.++|+++.++.+.+..++++++++.+++...........+ .
T Consensus 274 ~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~ 343 (642)
T COG1020 274 VGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLP----------G 343 (642)
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCC----------c
Confidence 468999999999999999999999999999999999999999999999999999999843210000000 0
Q ss_pred ceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc
Q 010854 82 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 161 (499)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~ 161 (499)
....+...... ... .......+++.++++|||||||.||||..+|+++.+.+.+..
T Consensus 344 --------------------~~~~~~~~~~~---~~~-~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~ 399 (642)
T COG1020 344 --------------------LALDDALSEIP---DTD-PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAG 399 (642)
T ss_pred --------------------cccccccccCC---ccC-cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHH
Confidence 00000000000 000 002234568999999999999999999999999999888877
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCC--ChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 239 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~--~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 239 (499)
..+.+...|+++...++.+..+...++.++..|+++++.+... ++..+.+.++++++|++..+|.++..++.......
T Consensus 400 ~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~ 479 (642)
T COG1020 400 ARFGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPD 479 (642)
T ss_pred HhcCCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhcc
Confidence 7799999999999999999999999999999999999997533 57789999999999999999999999887622221
Q ss_pred --ccccceeEEEeecCCCChhhHHHHHhhcc-cCceeccccccceeeeeecCCCCCCCc-cccccccCCCceEEEECCCC
Q 010854 240 --LDWTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECG 315 (499)
Q Consensus 240 --~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~d~~g 315 (499)
...+.++.++++||.++..+...+..... ...+.+.||.||+.............. ..++|.|+++..++|+|+.+
T Consensus 480 ~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~ 559 (642)
T COG1020 480 LISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGL 559 (642)
T ss_pred ccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCC
Confidence 22335999999999999998887765544 467999999999554332222111111 46899999999999999999
Q ss_pred CCCCCCCCcceeeEe-cccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEecccCCeeeeCceee
Q 010854 316 VPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKT 394 (499)
Q Consensus 316 ~~~~~g~~~~Gei~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~~d~i~~~G~~v 394 (499)
++++.|.. ||+++ +.+...+ +...++.+...|... .+|+|||++++..+|.+.++||.|+++|++|.+|
T Consensus 560 ~~~p~gv~--gel~i~g~~~a~g--y~~~p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Ri 629 (642)
T COG1020 560 RPLPLGVP--GELYIAGLGLALG--YLNRPDLTAERFIAL------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRI 629 (642)
T ss_pred CcCCCCCC--eeeEECCcchhhh--hcCChhhhHHHhhhc------cCccCCCeeeECCCCeEEEeccccceeEeceEec
Confidence 99999995 99999 4333332 445555555555432 3899999999999999999999999999999999
Q ss_pred chHHHHHHHhhcCc
Q 010854 395 SSVEIERVCDQADE 408 (499)
Q Consensus 395 ~~~~iE~~l~~~~~ 408 (499)
.+.|||..+. .+|
T Consensus 630 el~eie~~l~-~~~ 642 (642)
T COG1020 630 ELGEIEAALA-EQP 642 (642)
T ss_pred CcHHHHHHHh-cCC
Confidence 9999999996 654
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=3.7e-30 Score=255.67 Aligned_cols=330 Identities=15% Similarity=0.080 Sum_probs=223.8
Q ss_pred CCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEe
Q 010854 124 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLAL 199 (499)
Q Consensus 124 ~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~ 199 (499)
..+.++++.+.+||||||.||++.+||.++......... ..+++++|+++...+..+..+... .+++...|++++.
T Consensus 82 ~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 82 SADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred cCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 345678999999999999999999999987765544332 347899999998888887666544 5666788888764
Q ss_pred cCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc--cccceeEEEeecCCCChhhHHHHHhhcccCceecccc
Q 010854 200 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 277 (499)
Q Consensus 200 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~--~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg 277 (499)
.. . ....++.|+.+++|.+.++|+.+..|++.....+. ...++|.++++||+++++..+.+.+.+ ++++++.||
T Consensus 162 ~~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG 237 (445)
T TIGR03335 162 EG-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYG 237 (445)
T ss_pred CC-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCC
Confidence 43 2 24568999999999999999988887765433332 236899999999999999888887655 799999999
Q ss_pred ccceeeeeecCCCCCCCccccccccCCCceEEEECC-CCCCCCCCCCcceeeEecccccccccccccccccchhhcCCCC
Q 010854 278 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPM 356 (499)
Q Consensus 278 ~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~-~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (499)
+||++.. ..+.. . .....+.+.+.++|+|+ ++.++++|+ .|||+++..+... .-.++|+
T Consensus 238 ~TE~~~~-~~c~~-~----~g~h~~~d~~~vEIvDp~~~~~vp~Ge--~GELvvT~L~~~~------------~r~~~Pl 297 (445)
T TIGR03335 238 STEGTMC-GECQA-V----AGLHVPEDLVHLDVYDPRHQRFLPDGE--CGRIVLTTLLKPG------------ERCGSLL 297 (445)
T ss_pred hhhhhhe-EEecC-C----CCccccCCceEEEEEcCCCCCCCcCCC--ceEEEEEecCCCC------------ccCCceE
Confidence 9998632 22211 1 11233446688999995 567799999 5999996543210 0013566
Q ss_pred CCCccccccCceeEee--cC---c----eEEEecccCCeeeeCceeechHHHHHHHhhc---CccceeeeEEEeCCCCCC
Q 010854 357 YKGMCLRRHGDIIKRT--VG---G----YIIVQGRADDTMNLGGIKTSSVEIERVCDQA---DESILETAAISVSPAGGG 424 (499)
Q Consensus 357 ~~~~~~~~TGD~~~~~--~~---G----~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~---~~~v~~~~v~~~~~~~~~ 424 (499)
++ |+|||++++. +. | ++...||.||+++++|.+|+|.+||++|. . .+++...+-+.+.....+
T Consensus 298 iR----YrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
T TIGR03335 298 IN----YDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEEEG 372 (445)
T ss_pred EE----eecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCCCC
Confidence 66 8999999973 22 2 24456999999999999999999999997 6 355543343333332222
Q ss_pred ceEEEEEEEecCCCCCCHHHHHHHHHHH----H---HhhcCCceeeeEEEEc--CCCCCCC-CcHHHH
Q 010854 425 PEVLVIFVVLKKGFTSQPDKLKMIFSKA----I---QSKLNPLFKVSLVKVV--PEFPRTA-SNKLLR 482 (499)
Q Consensus 425 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~----~---~~~l~~~~~p~~~~~~--~~iP~t~-~GKv~r 482 (499)
...+...|...+....+.+++.+.+.+. + ...+........+.++ .++||++ .||..|
T Consensus 373 ~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2455555666554333344544444443 1 1112222222344455 4799984 688765
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=4.2e-30 Score=264.76 Aligned_cols=453 Identities=17% Similarity=0.112 Sum_probs=285.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCCc
Q 010854 3 SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK 82 (499)
Q Consensus 3 ~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (499)
.+|+.|++++..+.+++++.+++|++|..+++++|.++.-+....+.... ....+.. .+-....+.......
T Consensus 92 ~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia--~~~~s~~-~~i~~~l~i~~~~~~----- 163 (1032)
T KOG1178|consen 92 LRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIA--HFLTSVE-LEIVRRLNIIDILLN----- 163 (1032)
T ss_pred ccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhh--hhheecc-ceehhhhhhHHHHhh-----
Confidence 47899999999999999999999999999999999999111111111000 0000000 000000011110000
Q ss_pred eEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce
Q 010854 83 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA 162 (499)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~ 162 (499)
+...+.......-.+..+.... ........-+|..+.+.||||+||.||+|..+|..+++...|...
T Consensus 164 -------~~~~~~sv~~~~~~f~~~~~~~------~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~ 230 (1032)
T KOG1178|consen 164 -------SLFPKLSVETIADSFQMVLHNE------DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFT 230 (1032)
T ss_pred -------ccccccchhhccchhhhhhccC------CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccc
Confidence 0000000001111111111111 111112344577899999999999999999999999999999999
Q ss_pred eccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCC--hhHHHHHHHHhCCeEEecchHHHHHHHccCCCC-
Q 010854 163 HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE- 238 (499)
Q Consensus 163 ~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~- 238 (499)
.+....++++......+.....-. ....++.|+.+..+.+... +..+.+.+++++++.++.+|++.+.++......
T Consensus 231 ~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~ 310 (1032)
T KOG1178|consen 231 TFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSL 310 (1032)
T ss_pred cCCcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcch
Confidence 998888888744444433333333 4445555555555543332 678999999999999999999988776654331
Q ss_pred ------------cccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeeeecCCCCCC---CccccccccC
Q 010854 239 ------------GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP---QAFGAFSTAT 303 (499)
Q Consensus 239 ------------~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~---~~~~~~g~~~ 303 (499)
...-+.|+....+||+....+...+...+.-.-+..-|+.++.........-... .....+..+.
T Consensus 311 ~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p 390 (1032)
T KOG1178|consen 311 PLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVP 390 (1032)
T ss_pred hhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEecc
Confidence 0112368999999999877776644333322222234777775543321111000 0001111111
Q ss_pred -------CCceEEEECCCCCCCCCCCCcceeeEecccccccccc---cccccc--cchhhcCCCCCCCccccccCceeEe
Q 010854 304 -------MTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDR---LLNADH--EEVYFRGMPMYKGMCLRRHGDIIKR 371 (499)
Q Consensus 304 -------~~~~~~i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~TGD~~~~ 371 (499)
+....++....|.+.+.++ |..+++...+..... +..++. +..++. ....+++|+|||+|+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~---d~~~~r~y~tgD~gr~ 464 (1032)
T KOG1178|consen 391 KFDSIIGSLTVLESLYRAGGEGEGGV---GKGCLGAEQNLSSWVVDGYSTPENFLPNFLTV---DGVKARIYRTGDNGRS 464 (1032)
T ss_pred chhhccCCCcceeeeeccCcccCCcc---cceeecccccccceeeccccchhhcCCccccc---ccchhhccccccccee
Confidence 1223344444444544444 333432222221111 111111 111111 0123568999999999
Q ss_pred ecCceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHH
Q 010854 372 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSK 451 (499)
Q Consensus 372 ~~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~ 451 (499)
.++|.+.+.||.|++||.+|.++...+|+.++. .||.|.++++....+...+ +.+++||+...+.. ......|+.
T Consensus 465 l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~~~~---~~~~~~i~~ 539 (1032)
T KOG1178|consen 465 LKNGGLEISGRADRQIKDRGVRIELGELNTVVE-VHPDVKEAITLARENSTVG-QTLLAFVVERGGSK---SVLIRDIRN 539 (1032)
T ss_pred ecCCCEEEEEeccceEEEccEEEehhhhchhhc-cCcchhhhheeeeeccccC-ceEEEEEeccCCCC---chhHHHHHH
Confidence 999999999999999999999999999999996 7899999999999988777 89999999886543 333667888
Q ss_pred HHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHH
Q 010854 452 AIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 487 (499)
Q Consensus 452 ~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~ 487 (499)
+++++|+.|+.|..+++++++|+|++||||+++|.+
T Consensus 540 ~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 540 YLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLE 575 (1032)
T ss_pred hhcccccceecceEEEEhhhCCcCCCCCcChhhhhh
Confidence 899999999999999999999999999999999998
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=2.8e-27 Score=236.66 Aligned_cols=467 Identities=15% Similarity=0.134 Sum_probs=311.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCC------CHHHHHHHhhcCCeeEEEecccccccCccccchhhh
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF------AAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 75 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~ 75 (499)
+++||+|+++.++++|++++++||+.+|.+++|+.|.. ....+..+++.+++++|+++......++..+.....
T Consensus 824 lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~ 903 (1363)
T KOG3628|consen 824 LKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHV 903 (1363)
T ss_pred CCCCCeEEEEcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHh
Confidence 78999999999999999999999999999999999854 346788999999999999998654333333322222
Q ss_pred hhcCCCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhHH
Q 010854 76 LGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 155 (499)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~ 155 (499)
.++.-+...+++. -..++..-.+.... ......+...+++.+|++-+.--++|.-.++.++|.++++
T Consensus 904 ~~s~~p~i~~~~~-----------~~~t~~k~~~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla 970 (1363)
T KOG3628|consen 904 DQSAIPLILVLPK-----------LPETIRKRKKNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLA 970 (1363)
T ss_pred hhhcchhhhcccc-----------cchhhhhhhhhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHH
Confidence 2222222222211 01112111111111 1222334446678999999999999999999999999999
Q ss_pred HhhhcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCC---ChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 156 CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~---~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
.+......+.+.+...++...+.+...|+.. ++..++.|.+.+++++.. ++..|++.|+++++.-++.+-..++.+
T Consensus 971 ~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c 1050 (1363)
T KOG3628|consen 971 FCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLC 1050 (1363)
T ss_pred HHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHH
Confidence 9999999999999999999999999889887 899999999988887532 578899999999999999999999988
Q ss_pred HccCCCCccccccee-----EEEe-ecCCCChhhHHHHHhhcc--c---Cceecc-------------ccccceeeeeec
Q 010854 232 RNTNCLEGLDWTKIR-----SFAS-TGETSNVDDDLWLSSKAW--Y---NAIIES-------------CGGTELSSAYIQ 287 (499)
Q Consensus 232 ~~~~~~~~~~l~~l~-----~i~~-~G~~l~~~~~~~~~~~~~--~---~~i~~~-------------yg~tE~~~~~~~ 287 (499)
.+....+..+++... .+++ .-++....+..-+.+.+. + ..+... |...|-...+..
T Consensus 1051 ~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D 1130 (1363)
T KOG3628|consen 1051 QKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLD 1130 (1363)
T ss_pred HhccccccchhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeec
Confidence 876554433332111 2222 233322333332322221 1 112223 333332222221
Q ss_pred CCCCCCCccc-------------cccccCCCceEEEEC-CCCCCCCCCCCcceeeEecccccccccccccccccchhhc-
Q 010854 288 GSLLQPQAFG-------------AFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFR- 352 (499)
Q Consensus 288 ~~~~~~~~~~-------------~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~- 352 (499)
.......... --|...+++++.|++ ++..||..|+ .||||+....-.....+...+.....|.
T Consensus 1131 ~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~~d~~~~~~fn~ 1208 (1363)
T KOG3628|consen 1131 ARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTIGDELRSNHFNA 1208 (1363)
T ss_pred hhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCC--cceEEeccccccccccccCchhhhhhhhh
Confidence 1111111111 226778899999999 8888999998 6999993221111111111111111111
Q ss_pred --CCCCCCCccccccCceeEee------cC----ceEEEecccCCeeeeCceeechHHHHHHHhhcCccceeeeEEEeCC
Q 010854 353 --GMPMYKGMCLRRHGDIIKRT------VG----GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 420 (499)
Q Consensus 353 --~~~~~~~~~~~~TGD~~~~~------~~----G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~ 420 (499)
......+..|-||||+|+.. .+ ..||++|-.++.+-++|.+.+|.+||..+...||.|.+|+|+...
T Consensus 1209 rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~- 1287 (1363)
T KOG3628|consen 1209 RLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT- 1287 (1363)
T ss_pred hccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC-
Confidence 11223366799999999973 22 358999999999999999999999999998889999999998754
Q ss_pred CCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceee-eEEEEcC--CCCCCCCcHHHHHHHHHHH-Hhhhh
Q 010854 421 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV-SLVKVVP--EFPRTASNKLLRRVLRDQI-KHELS 494 (499)
Q Consensus 421 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p-~~~~~~~--~iP~t~~GKv~r~~l~~~~-~~~~~ 494 (499)
..++.++.... +....+|.-.+ ++..|..|..+ ..+.||+ -+|+++.|..+|..+++.+ .++++
T Consensus 1288 -----glvVvviE~~g--q~~~~~LvPlI---v~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~ 1355 (1363)
T KOG3628|consen 1288 -----GLVVVVIECHG--QQELADLVPLI---VNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLD 1355 (1363)
T ss_pred -----CeEEEEEEecC--chhHhhhhHHH---HHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccc
Confidence 55565555543 22333333332 45677888888 6677786 6999999999999987754 44443
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.95 E-value=5.2e-26 Score=214.19 Aligned_cols=324 Identities=23% Similarity=0.228 Sum_probs=234.9
Q ss_pred CCCCCCCeEEEEecCCCCCCCceEEecchhhH---HHhhhcceeccCcCCcEEEeecCcc-ccchhhhhhhhhccCcEEE
Q 010854 123 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLG-WVMGPVILFSSFLNGATLA 198 (499)
Q Consensus 123 ~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~---~~~~~~~~~~~~~~~~~~l~~~p~~-~~~~~~~~~~~l~~G~~~~ 198 (499)
...+.+++..+--||||||.|+.+.+++..+. ..++......+...+|++..+.... +..|+..-+++-..|++++
T Consensus 85 ~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 85 FAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred ccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 34556778889999999999999999987644 4444444556889999987666543 3334444556666888887
Q ss_pred ecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCc--ccccceeEEEeecCCCChhhHHHHHhhcccCceeccc
Q 010854 199 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 276 (499)
Q Consensus 199 ~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~y 276 (499)
-..+ -..+..+++++.+++|++.++|+.+..|++...+.+ ..-.++|.+++|+|+++++.++.+..++ +++.++.|
T Consensus 165 p~~~-g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diY 242 (438)
T COG1541 165 PISG-GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIY 242 (438)
T ss_pred ccCC-ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecc
Confidence 6653 355889999999999999999999999998877665 2235899999999999999999998776 89999999
Q ss_pred cccceeeee-ecCCCCCCCccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEecccccccccccccccccchhhcCC
Q 010854 277 GGTELSSAY-IQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGM 354 (499)
Q Consensus 277 g~tE~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~ 354 (499)
|+||..+.. ..|.... ......+..-++|+| ++|+++++|+. ||++++..... ++
T Consensus 243 GltE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~T~L~~~----------------~~ 299 (438)
T COG1541 243 GLTEGFGPGAGECTERN-----GLHIWEDHFIFEIVDPETGEQLPDGER--GELVITTLTKE----------------GM 299 (438)
T ss_pred ccccccCCccccccccc-----CCCcchhhceeeeecCCcCccCCCCCe--eEEEEEecccc----------------Cc
Confidence 999987652 2222211 122345778899999 99999999995 99999644321 35
Q ss_pred CCCCCccccccCceeEeecC----ce-----EEEecccCCeeeeCceeechHHHHHHHhhcCccce-eeeEEEeCCCCCC
Q 010854 355 PMYKGMCLRRHGDIIKRTVG----GY-----IIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL-ETAAISVSPAGGG 424 (499)
Q Consensus 355 ~~~~~~~~~~TGD~~~~~~~----G~-----l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~-~~~v~~~~~~~~~ 424 (499)
|+++ |+|||+..+.++ |. ..+.||.+|++++.|.+|+|..||++|. +.+++. +..++... ....
T Consensus 300 PlIR----YrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~-~~~~ 373 (438)
T COG1541 300 PLIR----YRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR-NGGL 373 (438)
T ss_pred ceEE----EEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec-CCCC
Confidence 6666 999999998763 33 3489999999999999999999999997 889888 55555555 3333
Q ss_pred ceEEEEEEEecCCCCCCHH--HHHHHHHHHHHhhcCCceee-eEEEEcCCCCCCCCcHHH
Q 010854 425 PEVLVIFVVLKKGFTSQPD--KLKMIFSKAIQSKLNPLFKV-SLVKVVPEFPRTASNKLL 481 (499)
Q Consensus 425 ~~~~~~~v~~~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p-~~~~~~~~iP~t~~GKv~ 481 (499)
..+.+-|++.+....... .+.+.+.+.+...+. ..+ ..++.+.++||+.. |..
T Consensus 374 -d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 374 -DELTVRVELENEAEELEDERRLAKKLIKNIKSELG--VRVEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred -ceEEEEEEecCcccchHHHHHHHHHHHHHHHhhcC--CceEEEEEeccceecccC-cee
Confidence 777888888765221222 222344444443333 222 34444569999965 543
No 128
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.2e-21 Score=185.53 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=105.7
Q ss_pred CccccccCceeEe-ecCceEEEecccCCeeeeCc---eeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEe
Q 010854 359 GMCLRRHGDIIKR-TVGGYIIVQGRADDTMNLGG---IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVL 434 (499)
Q Consensus 359 ~~~~~~TGD~~~~-~~~G~l~~~gR~~d~i~~~G---~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~ 434 (499)
.++||+|||+|++ |++|+|++.||.+ +| ++|+|. ||++|. +||+|.+++|++++++.+| +.++|+|++
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv~ 278 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVEA 278 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEEE
Confidence 5689999999998 7999999999998 78 799999 999996 9999999999999999998 999999997
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCCCCCCCCcHHHHHHHHHHHHhhhh
Q 010854 435 KKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 494 (499)
Q Consensus 435 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~iP~t~~GKv~r~~l~~~~~~~~~ 494 (499)
.. ..+.+++.++ ++.+|+. +.|.+++++++||+|++||++|+.|++++.+..+
T Consensus 279 ~~--~~~~~el~~~----l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~ 331 (365)
T PRK09188 279 EL--PADEKSLRAR----LAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQID 331 (365)
T ss_pred CC--CCCHHHHHHH----HHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcccc
Confidence 63 3345555555 5567888 9999999999999999999999999998765543
No 129
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.81 E-value=1.4e-18 Score=155.95 Aligned_cols=174 Identities=17% Similarity=0.131 Sum_probs=125.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcCCC
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 81 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (499)
+++||+|+|+++|++++++++|||+++|++++|+| ++++++++++++...... .+.
T Consensus 50 v~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~-----------~~~ 105 (227)
T TIGR03089 50 AEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAA-----------GSG 105 (227)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcc-----------cCC
Confidence 68999999999999999999999999999999995 789999999886542211 111
Q ss_pred ceEEeccc--CCCCCCCCCcCCCCHHHHhcccCCCCCCCCCCCC-CCCCCCeEEEEecCCCCCCCceEEecchhhHHHhh
Q 010854 82 KAIVLPAI--GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV-YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 158 (499)
Q Consensus 82 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~ 158 (499)
....+... ..........+..++.+.+..... ...+. ...++|++.++||||+ +|+++....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~- 170 (227)
T TIGR03089 106 EVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD-----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA- 170 (227)
T ss_pred ceEEEeccccccCCCCCCCCcccchhhhhhccCC-----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH-
Confidence 22222110 000000112232455554442111 11111 3456899999999986 566655544
Q ss_pred hcceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCe
Q 010854 159 EGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVT 219 (499)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t 219 (499)
..++++++|+++ .+|++|.+|+.. ++.+++.|+++++.+ .++++.+++.|+++|+|
T Consensus 171 ---~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 ---RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred ---hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 456789999999 999999999975 999999999999996 78999999999999987
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.80 E-value=2e-17 Score=160.65 Aligned_cols=246 Identities=17% Similarity=0.080 Sum_probs=161.4
Q ss_pred eEEEEecCCCCCCCceEEecchhhHHHhhhc---ceeccCcCCcEEEeecCccccchhhhhhhhhccCcE-EEecCCCCC
Q 010854 130 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 205 (499)
Q Consensus 130 ~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~-~~~~~~~~~ 205 (499)
-..+..||||||.|-.+..+........+.. +...++..++++...+. ..+ .+...+..... +-..+-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~---~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLR---ADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEc---cCh--hHHHHHHhccceeeecCCCcC
Confidence 4567789999999999999987543332222 12235566666554421 111 11111211111 222222234
Q ss_pred hhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcccccceeEEEeecCCCChhhHHHHHhhcccCceeccccccceeeee
Q 010854 206 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAY 285 (499)
Q Consensus 206 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 285 (499)
.+.+++.|++++|+++.++|+.+..|++.....+.+ ..++.++++||.++++..+.+++.+ ++++++.||+|| |.++
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 688999999999999999999999999876554444 3789999999999998888887666 799999999999 5555
Q ss_pred ecCCCCCCCccccccccCCCceEE--EECCCCCCCCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCcccc
Q 010854 286 IQGSLLQPQAFGAFSTATMTAGLV--ILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 363 (499)
Q Consensus 286 ~~~~~~~~~~~~~~g~~~~~~~~~--i~d~~g~~~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (499)
..+... ....-.+.+-++ ++|+.++ +..+|+..+. ..+|.++ |
T Consensus 253 ~eC~~g------~lHl~ed~~~vE~~ivD~~~~---------~~~ViT~L~n----------------~~~PlIR----Y 297 (430)
T TIGR02304 253 STCRCG------TLHLNEDLVHIEKQYLDEHKR---------FVPIITDFTR----------------TTQPIVR----Y 297 (430)
T ss_pred EecCCC------CEEEccccEEEEeeEECCCCc---------eEEEEecCCC----------------ccceEEe----e
Confidence 444321 122223344455 7886653 2334432211 2366666 9
Q ss_pred ccCceeEeecC----ce----E-EEecccCCeeee---Cc--eeechHHHHHHHhhcCccceeeeEEEe
Q 010854 364 RHGDIIKRTVG----GY----I-IVQGRADDTMNL---GG--IKTSSVEIERVCDQADESILETAAISV 418 (499)
Q Consensus 364 ~TGD~~~~~~~----G~----l-~~~gR~~d~i~~---~G--~~v~~~~iE~~l~~~~~~v~~~~v~~~ 418 (499)
+|||++.+.++ |. + .+.||.+|+++. +| .+++|..+++++....++|.+..++..
T Consensus 298 rtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 298 RLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred eCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 99999987543 32 3 388999999985 34 456999999886546789988887753
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.66 E-value=1.3e-14 Score=146.85 Aligned_cols=445 Identities=13% Similarity=0.091 Sum_probs=278.9
Q ss_pred CCCCCEEEEEcCCc--HHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccccccCccccchhhhhhcC
Q 010854 2 FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA 79 (499)
Q Consensus 2 v~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 79 (499)
+.++|+|.++...+ ++++++.++|...|.+.+|+.+..+.+++...++....+++++.....+ +..+.
T Consensus 147 l~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r----------~~~~~ 216 (1363)
T KOG3628|consen 147 LKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGER----------AFIND 216 (1363)
T ss_pred CCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHH----------Hhhhc
Confidence 57899999999887 8999999999999999999999999999999999999999998775321 11100
Q ss_pred CCceEEecccCCCCCCCCCcCCCCHHHHhcccCCCC-----CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecchhhH
Q 010854 80 PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP-----RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI 154 (499)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~ 154 (499)
- ...++...++...... ...........-. ..+|-||.+++|.--|++.+|. +.
T Consensus 217 ~-------------------~~~s~~k~v~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~ 275 (1363)
T KOG3628|consen 217 N-------------------SPVSLAKAVAWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FL 275 (1363)
T ss_pred c-------------------CcccHHHHHHhhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cc
Confidence 0 0111111111000000 0011111122223 8899999999999999999997 43
Q ss_pred HHhh---------------hc-----ceeccCcCCcEEEeecCccccchhhh-hhhhhccCcEEEecCCCC--ChhHHHH
Q 010854 155 RCTA---------------EG-----WAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGSP--LERSFGK 211 (499)
Q Consensus 155 ~~~~---------------~~-----~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~--~~~~~~~ 211 (499)
.+++ ++ ...++....+.++....+.-..|++. ++.++++|.+.+.++... .+..+.+
T Consensus 276 ~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~ 355 (1363)
T KOG3628|consen 276 PQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIAN 355 (1363)
T ss_pred cchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhh
Confidence 3321 11 11234455677777777777778776 999999999999998643 4678999
Q ss_pred HHHHhCCeEEecchHHHHHHHccCC-----------CCcccccceeEEEeecCCCChhhHHHHHhhcc---cC-------
Q 010854 212 FVQDAGVTVLGTVPSLVKAWRNTNC-----------LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW---YN------- 270 (499)
Q Consensus 212 ~i~~~~~t~l~~~P~~l~~l~~~~~-----------~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~---~~------- 270 (499)
.+.+++++++..--..+++...... .+-.+++++|.+++..+.+..+..+....+.- ++
T Consensus 356 l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~ 435 (1363)
T KOG3628|consen 356 LITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVD 435 (1363)
T ss_pred hhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceee
Confidence 9999999998877655554433211 12256899999999999888776554332211 11
Q ss_pred -----------ceeccccccceeeeeecCCCCC-----------------------------CCccccccccCCC-ceEE
Q 010854 271 -----------AIIESCGGTELSSAYIQGSLLQ-----------------------------PQAFGAFSTATMT-AGLV 309 (499)
Q Consensus 271 -----------~i~~~yg~tE~~~~~~~~~~~~-----------------------------~~~~~~~g~~~~~-~~~~ 309 (499)
-....-+++|.+....-.+... ......+|...|| ..+.
T Consensus 436 ~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~ 515 (1363)
T KOG3628|consen 436 FPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLA 515 (1363)
T ss_pred chhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEE
Confidence 0111112233332221111100 0011223333444 3445
Q ss_pred EEC-CCCCCCCCCCCcceeeEec-----ccccccccccccccccchhhcCCCCCCCccccccCceeEeecCceEEEeccc
Q 010854 310 ILD-ECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA 383 (499)
Q Consensus 310 i~d-~~g~~~~~g~~~~Gei~v~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~l~~~gR~ 383 (499)
+++ ++.+.|.+++ +|||||. ..+++....+.+.+....++..++...+..|.|||=+|++. +|.++++|-.
T Consensus 516 vv~~~t~~LC~~~e--VGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k 592 (1363)
T KOG3628|consen 516 VVNPDTNQLCKTDE--VGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLK 592 (1363)
T ss_pred EeCCCcccccccCc--ceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEec
Confidence 666 7778888998 7999992 34555555666666667777777777778899999999995 5556666666
Q ss_pred CCeee-eCceeechHHHH----------HHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHH
Q 010854 384 DDTMN-LGGIKTSSVEIE----------RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA 452 (499)
Q Consensus 384 ~d~i~-~~G~~v~~~~iE----------~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 452 (499)
+|.+. ..|...+..+|- -+. +..+.|-++.++- . ++++..++-++.. .+++-.++..+-
T Consensus 593 ~d~llq~~~~~h~~d~iv~thya~~~iktV~-R~v~~VF~~saf~------~-E~~~Vv~~esP~a--~e~~~~q~~~~v 662 (1363)
T KOG3628|consen 593 EDGLLQVSGWRHNADDIVATHYAVELIKTVM-RGVIAVFDVSAFE------D-EHIVVVVLESPDA--TEENSFQWMSRV 662 (1363)
T ss_pred hhhhhhhhhhhhhhhhhHhhHHHHHHHHHHH-hccceEEEEeeee------c-ceEEEEEEeCcch--hhhhhhhHHHHH
Confidence 66665 567665544333 333 3566676776663 1 6655555444433 344444444443
Q ss_pred HHhhcCCceeeeE----EEEcCCCCCCCCcHHHHHHHHHHHHh
Q 010854 453 IQSKLNPLFKVSL----VKVVPEFPRTASNKLLRRVLRDQIKH 491 (499)
Q Consensus 453 ~~~~l~~~~~p~~----~~~~~~iP~t~~GKv~r~~l~~~~~~ 491 (499)
++ .+...+.... ++.-+.+|||+.|.|.-..++++|.+
T Consensus 663 ~q-~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 663 FQ-ALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLE 704 (1363)
T ss_pred HH-HHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHc
Confidence 32 2333333322 22236899999999999999999875
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.26 E-value=1.3e-11 Score=89.30 Aligned_cols=70 Identities=34% Similarity=0.428 Sum_probs=57.4
Q ss_pred HHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceee--eEEEEcCC-CCC
Q 010854 398 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV--SLVKVVPE-FPR 474 (499)
Q Consensus 398 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p--~~~~~~~~-iP~ 474 (499)
|||+++. +||+|.+++|++.+++.+| +.+++++++ +. +.++++++++|+.|+.| ..++.+++ ||+
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~------~~----~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~ 68 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL------DE----EEIRDHLRDKLPPYMVPRRIRFVRLDEELPR 68 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE------HH----HHHHHHHHHHS-GGGS-SEEEEEEESSSEEB
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe------ee----cccccchhhhCCCcceeeEEEEccccCcCCC
Confidence 7999996 9999999999999998888 999999998 22 44555567789999999 56666677 999
Q ss_pred CCCcH
Q 010854 475 TASNK 479 (499)
Q Consensus 475 t~~GK 479 (499)
|++||
T Consensus 69 t~~GK 73 (73)
T PF13193_consen 69 TPSGK 73 (73)
T ss_dssp ETTSS
T ss_pred CCCCC
Confidence 99998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.04 E-value=9.3e-09 Score=98.12 Aligned_cols=228 Identities=17% Similarity=0.046 Sum_probs=130.1
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCc--EEEeecCccc---cch--hhhhhhhhccC
Q 010854 125 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGD--VYCWPTNLGW---VMG--PVILFSSFLNG 194 (499)
Q Consensus 125 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~--~~l~~~p~~~---~~~--~~~~~~~l~~G 194 (499)
...+++...+.||||||.|.-+.+.+..+..+...... .+...... .++...|-.. .++ ....+..+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34567888999999999986666665544444322222 12111111 2222223221 111 12233444555
Q ss_pred cEEEecCCCCChhHHHHHH----HHhCCeEEecchHHHHHHHccCCCCcc--ccc-ceeEEEeecC------CCChh-hH
Q 010854 195 ATLALYQGSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCLEGL--DWT-KIRSFASTGE------TSNVD-DD 260 (499)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~i----~~~~~t~l~~~P~~l~~l~~~~~~~~~--~l~-~l~~i~~~G~------~l~~~-~~ 260 (499)
....+-....+.+.+...+ .+.++..++++|.++..++...++.+. .++ ..+.+-.||- .++.+ ..
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5544433334555555444 456788999999987776655443433 333 4555666653 35444 44
Q ss_pred HHHHhhccc---CceeccccccceeeeeecCCCCCCCccccccccCCCceEEEEC-CCCCCCCCCCCcceeeEe-ccccc
Q 010854 261 LWLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYL 335 (499)
Q Consensus 261 ~~~~~~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~g~~~~~g~~~~Gei~v-~~~~~ 335 (499)
+.+.+.+.. ..+++.||+||....++.+..... ...|. +.|.| .+.++++.|+. |-|.+ .+...
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~-------~~p~w--V~iRDp~tl~~~~~Ge~--Gli~vidl~~~ 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGHF-------HVPPW--VIIRDPETLEPLPPGET--GLIQVIDLANT 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCCcc-------cCCCe--EEEECCCCCcCCCCCCe--eEEEEEccccc
Confidence 455555522 369999999998876665533222 12234 55667 77899999984 88888 33222
Q ss_pred ccccccccccccchhhcCCCCCCCccccccCceeEeecC--------ceEEEecccCC
Q 010854 336 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG--------GYIIVQGRADD 385 (499)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~--------G~l~~~gR~~d 385 (499)
+.+ +...|.|+|.+..+ .++.++||.+.
T Consensus 315 s~p----------------------~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 315 SYP----------------------GFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred CCC----------------------cEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 211 11469999987654 27899999873
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.56 E-value=4.6e-07 Score=91.73 Aligned_cols=165 Identities=17% Similarity=0.129 Sum_probs=85.7
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCc-eeccccccceeeeeecCCCCCCCccccccccCC-CceEEEECCCC----
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNA-IIESCGGTELSSAYIQGSLLQPQAFGAFSTATM-TAGLVILDECG---- 315 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~-i~~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~i~d~~g---- 315 (499)
|++|+.+.+.+..-...-...+++.+++.. +...|++||+...+... ...... .=.|-. ..+..-+++.+
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~-~~~~~~---~l~~~~~ffEFip~~~~~~~~~ 341 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD-PEDPGY---VLAPDSGFFEFIPVDEDEQNPS 341 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES--CCC--E---EE-TTSSEEEEEE-STT-----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC-CCCCce---EeecCCeEEEEEeccCCccccc
Confidence 688996665554444566677777776755 44699999965433322 111111 111111 22333344322
Q ss_pred ---CC-----CCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEeec--Cc--eEEEeccc
Q 010854 316 ---VP-----YPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTV--GG--YIIVQGRA 383 (499)
Q Consensus 316 ---~~-----~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~--~G--~l~~~gR~ 383 (499)
+. +..|+ .-|++++.. .| .|+ |+.||+++... ++ .+.|+||.
T Consensus 342 ~~~~~l~~~ele~G~--~YelviTt~-~G-------------LyR----------Y~iGDvVrv~gf~~~~P~i~F~~R~ 395 (528)
T PF03321_consen 342 EQPKTLLLHELEVGE--EYELVITTN-SG-------------LYR----------YRIGDVVRVTGFYNQTPRIEFVGRR 395 (528)
T ss_dssp --SSSEEGGG--TT---EEEEEEEST-TS--------------SS----------EEECEEEEEEEEETTEEEEEEEEET
T ss_pred CCCceecHHHhcCCC--eEEEEEecc-cc-------------eee----------eecCCEEEEeeccCCCcEEEEeccC
Confidence 22 22333 144555221 11 333 89999999853 33 78999999
Q ss_pred CCeeeeCceeechHHHHHHHhhc----CccceeeeEEEeCCCCCCceEEEEEEEecCC
Q 010854 384 DDTMNLGGIKTSSVEIERVCDQA----DESILETAAISVSPAGGGPEVLVIFVVLKKG 437 (499)
Q Consensus 384 ~d~i~~~G~~v~~~~iE~~l~~~----~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~ 437 (499)
+.++.+.|++++-.+|++++.+. .-.+.+..+......... ..-+.++.+...
T Consensus 396 ~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 396 GQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWELEGE 452 (528)
T ss_dssp TEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEECS-
T ss_pred CceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEeCCC
Confidence 99999999999999999998744 233556666554222222 455666666643
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.22 E-value=0.00019 Score=73.19 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=37.9
Q ss_pred cccCceeEeec----CceEEEecccCCeeeeCceeechHHHHHHHhh
Q 010854 363 RRHGDIIKRTV----GGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 405 (499)
Q Consensus 363 ~~TGD~~~~~~----~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 405 (499)
|+.||.+++.. --.+.|+||.+.++.+.|++++-++++.++.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 89999999853 34689999999999999999999999998864
No 136
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=98.11 E-value=1.1e-05 Score=61.46 Aligned_cols=87 Identities=22% Similarity=0.318 Sum_probs=55.5
Q ss_pred ceeechHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCC---CHHHHHHHHHHHHHhhcCCceee-eEE
Q 010854 391 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLNPLFKV-SLV 466 (499)
Q Consensus 391 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~~~~~~~l~~~~~p-~~~ 466 (499)
|.||||..||+++. .+|++...+.+.+...... +.+...|...++... +.+++.+.+.+.+++.+. ..| ..+
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~v~~~~~~-D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg--v~~~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIVVTREGGL-DELTVRVELRPGFSDDAEDLEALAERIAERLKERLG--VRPEVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEEEEEETTE-EEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS--S-EEEEE
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEEEEcCCCC-cEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC--ceEEEEE
Confidence 78999999999996 8999995555555544444 778888888875532 345677778888877776 334 333
Q ss_pred EEcCCCCCCCCcHHHH
Q 010854 467 KVVPEFPRTASNKLLR 482 (499)
Q Consensus 467 ~~~~~iP~t~~GKv~r 482 (499)
+-..+|||+ .||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 444589998 678654
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.98 E-value=0.0022 Score=65.10 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=37.2
Q ss_pred cccCceeEee----cCceEEEecccCCeeeeCceeechHHHHHHHhh
Q 010854 363 RRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 405 (499)
Q Consensus 363 ~~TGD~~~~~----~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 405 (499)
||.||+.+.. ....+.|++|.+.+..+.|++.+-.++-.++.+
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHH
Confidence 8999999874 446799999999999999999999999888763
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.95 E-value=0.00095 Score=67.49 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=79.5
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhcccCcee-ccccccceeeeeecCCCCCCCccccccccCCCc---eEEEECC-CC-
Q 010854 242 WTKIRSFASTGETSNVDDDLWLSSKAWYNAII-ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA---GLVILDE-CG- 315 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~-~~yg~tE~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~i~d~-~g- 315 (499)
|++++.|.+.-..-..+-...++...++..++ ..|++||+...+-..+...+.... ....|+. |.--+++ ++
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~~s--y~L~p~~~yFEFip~~~~~~~ 380 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVS--YTLIPTMAYFEFLPVHRNNGV 380 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCCcccce--eeecCCcEEEEEeeccCcccc
Confidence 67777766654433355556666666677655 599999976554333322222111 1112222 2222221 11
Q ss_pred ----------------CC-----CCCCCCcceeeEecccccccccccccccccchhhcCCCCCCCccccccCceeEee--
Q 010854 316 ----------------VP-----YPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT-- 372 (499)
Q Consensus 316 ----------------~~-----~~~g~~~~Gei~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~-- 372 (499)
++ +..|+ .-|++|+. +.| .|+ ||.||+.+..
T Consensus 381 ~~~~~~~~~~~~~~~~~~v~l~ev~~G~--~YelvvTt-~~G-------------LyR----------YrlGDvv~V~Gf 434 (612)
T PLN02620 381 TNSISLPKSLNEKEQQELVDLVDVKLGQ--EYELVVTT-YAG-------------LYR----------YRVGDVLRVAGF 434 (612)
T ss_pred cccccccccccccccCccccHHHccCCC--eEEEEEEe-cCc-------------eEE----------EecCCEEEEeee
Confidence 11 22333 24455521 111 343 8999999974
Q ss_pred --cCceEEEecccCCeeeeCceeechHHHHHHHhh
Q 010854 373 --VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 405 (499)
Q Consensus 373 --~~G~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 405 (499)
....+.|++|.+-+..+.|++.+-.++-.++.+
T Consensus 435 ~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 435 KNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred cCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 346799999999999999999999999887753
No 139
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=81.53 E-value=6.4 Score=38.92 Aligned_cols=89 Identities=16% Similarity=0.035 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.+|.+|++. -....+|+..+...+..+. ...+++.++++....+-+. ..++..++++..|+..+.+++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc-eeeeeeccccccccccccccc
Confidence 467788766 1245567776655544433 3467889999888777653 334558899999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEec
Q 010854 203 SPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~ 223 (499)
....+.+...+++.++.++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 888899999999999999996
No 140
>PLN02736 long-chain acyl-CoA synthetase
Probab=79.29 E-value=18 Score=38.33 Aligned_cols=101 Identities=8% Similarity=-0.135 Sum_probs=72.6
Q ss_pred EEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|+..+...+..+. ...+++++|++...++-+.. ..+..++++..|+.++.+.+...++.+...++..++..++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 3467777666554444 35689999999877766543 2334788889999999888777889999999999999999
Q ss_pred cchHHHHHHHccCCCCcccccceeEEEee
Q 010854 223 TVPSLVKAWRNTNCLEGLDWTKIRSFAST 251 (499)
Q Consensus 223 ~~P~~l~~l~~~~~~~~~~l~~l~~i~~~ 251 (499)
+.+..+..+..... .++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 99888776655322 13445555543
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.45 E-value=23 Score=36.12 Aligned_cols=86 Identities=14% Similarity=-0.092 Sum_probs=65.6
Q ss_pred ecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecc
Q 010854 148 WTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 224 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 224 (499)
+|...+...+..+.. ..+++.++++....+-+. ..+..+++.+..|+..+.++.....+.+...++..++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSH-EYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 777766555443333 457889999988777655 2344589999999999999877788899999999999999998
Q ss_pred hHHHHHHHcc
Q 010854 225 PSLVKAWRNT 234 (499)
Q Consensus 225 P~~l~~l~~~ 234 (499)
......+.+.
T Consensus 111 ~~~~~~~~~~ 120 (521)
T PRK06187 111 SEFVPLLAAI 120 (521)
T ss_pred chHHHHHHHH
Confidence 8877665443
No 142
>PRK09274 peptide synthase; Provisional
Probab=74.18 E-value=18 Score=37.38 Aligned_cols=98 Identities=10% Similarity=-0.037 Sum_probs=67.0
Q ss_pred CCCeEEEEecCCCC-CCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 127 VDAVVNILFSSGTT-GEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 127 ~~~~a~i~~TSGtT-G~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
++.+|++....+++ +..+...+|...+...+..+.. ..+++++|++...++-+.. ....+++++..|+..+.+.+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcCC
Confidence 45666554332221 1222335777776655544443 4578999999887765432 33348889999999999887
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
....+.+...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 77788899999999999988754
No 143
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=72.21 E-value=16 Score=36.22 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=76.4
Q ss_pred eEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEE
Q 010854 145 AIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 221 (499)
Q Consensus 145 ~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l 221 (499)
++.+|.+.+...+...+ ..++++.||++..+.|-+.. .....+++...|..++.+.+......+.=.+++.++-.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 45567777666555444 45799999999988876532 334477788899999988777777778788999999999
Q ss_pred ecchHHHHH-----HHcc---------CCCCcccccceeEEEeecC
Q 010854 222 GTVPSLVKA-----WRNT---------NCLEGLDWTKIRSFASTGE 253 (499)
Q Consensus 222 ~~~P~~l~~-----l~~~---------~~~~~~~l~~l~~i~~~G~ 253 (499)
+..|.+... |.+. +..+-..++.++.++..+|
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 999987432 3222 1223345678888888774
No 144
>PLN03052 acetate--CoA ligase; Provisional
Probab=71.59 E-value=25 Score=37.94 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=71.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.-..+..+.+ ...+|...+...+..+. ...+++++|++...+|.+-. ..+..++++..|+..+.+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCC
Confidence 457777664332221222 24578777655554443 45689999999988886543 33448889999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
.+.++.+...++..++..++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 888999999999999999988664
No 145
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=70.86 E-value=28 Score=36.23 Aligned_cols=85 Identities=16% Similarity=0.058 Sum_probs=65.2
Q ss_pred EEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|...+...+..+. ...+++++|++...++-+.. ..+.+++.+..|+.++.+.+...++.+...++..+++.++
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPE-LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 3577777655544443 34678999999887775543 3344889999999999888788889999999999999999
Q ss_pred cchHHHHHH
Q 010854 223 TVPSLVKAW 231 (499)
Q Consensus 223 ~~P~~l~~l 231 (499)
..+..+...
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 988876554
No 146
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.86 E-value=29 Score=35.33 Aligned_cols=86 Identities=8% Similarity=-0.078 Sum_probs=64.2
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+. ...+++.++++....+-.. ..++.+++.+..|+..+.+++....+.+.+.+++.++..++.
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 108 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSP-HWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFV 108 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEE
Confidence 467776655443333 3457889999988776553 234458889999999999987778889999999999999999
Q ss_pred chHHHHHHHc
Q 010854 224 VPSLVKAWRN 233 (499)
Q Consensus 224 ~P~~l~~l~~ 233 (499)
.+.....+..
T Consensus 109 ~~~~~~~~~~ 118 (513)
T PRK07656 109 LGLFLGVDYS 118 (513)
T ss_pred chhhHHHHHH
Confidence 8877665433
No 147
>PRK06839 acyl-CoA synthetase; Validated
Probab=69.84 E-value=27 Score=35.41 Aligned_cols=97 Identities=15% Similarity=-0.001 Sum_probs=70.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhccee----ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 201 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~ 201 (499)
.++.+|++. + ...+|+..+......+... +++++++++...++-+.. ..+.+++.+..|+..+.++
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecC
Confidence 356676663 1 3457887776655554433 468899998887766633 3444889999999999988
Q ss_pred CCCChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 202 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 202 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
.....+.+...+++.+++.++..+.....+.
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHHH
Confidence 7777888889999999999998887765543
No 148
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=69.78 E-value=17 Score=38.62 Aligned_cols=95 Identities=14% Similarity=-0.045 Sum_probs=69.0
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++.-..+ .+ ....+|...+...+..+. ..++++++|++...+|..-. ..+.+++++..|+..+.+.+.
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCC
Confidence 466776543221 11 135678877755554444 45689999999988887644 233488899999999999888
Q ss_pred CChhHHHHHHHHhCCeEEecch
Q 010854 204 PLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P 225 (499)
+..+.+...++..++..+++..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 8899999999999999998764
No 149
>PRK08316 acyl-CoA synthetase; Validated
Probab=69.73 E-value=21 Score=36.42 Aligned_cols=86 Identities=13% Similarity=0.046 Sum_probs=64.5
Q ss_pred EEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|+..+...+..+. ...++.+++++....+-+.. .+..+++++..|+..+.+......+.+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 4467766655443333 34578899999887766553 4445889999999999988777888899999999999999
Q ss_pred cchHHHHHHH
Q 010854 223 TVPSLVKAWR 232 (499)
Q Consensus 223 ~~P~~l~~l~ 232 (499)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8887766554
No 150
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=69.30 E-value=38 Score=36.65 Aligned_cols=117 Identities=10% Similarity=0.010 Sum_probs=78.6
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhccee------ccCcCC-----------cEEEeecCccccchhhhhhh
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH------IDLKVG-----------DVYCWPTNLGWVMGPVILFS 189 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~------~~~~~~-----------~~~l~~~p~~~~~~~~~~~~ 189 (499)
++.+|++....| .+ ...+|...+...+..+... .+++++ |++...++-+ .-.++..++
T Consensus 75 p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADLA 149 (746)
T ss_pred CCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHHH
Confidence 466776533222 11 2356777666555444432 367777 7777666543 334455888
Q ss_pred hhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcccccceeEEEeec
Q 010854 190 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 252 (499)
Q Consensus 190 ~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G 252 (499)
++..|+..+.+.....++.+...++..++.++++.+..+..+.+... .++.++.+++-+
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 99999999999888889999999999999999998888877765422 245566655543
No 151
>PLN03102 acyl-activating enzyme; Provisional
Probab=69.05 E-value=20 Score=37.47 Aligned_cols=84 Identities=14% Similarity=-0.014 Sum_probs=63.3
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..+++.+|++...+|-.-. ....+++.+..|+.++.+.+....+.+...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 4677776655544443 4588999999888875432 23348899999999999988888899999999999999998
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.+.....+
T Consensus 118 ~~~~~~~~ 125 (579)
T PLN03102 118 DRSFEPLA 125 (579)
T ss_pred ChhhHHHH
Confidence 77655433
No 152
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=69.04 E-value=23 Score=28.80 Aligned_cols=46 Identities=9% Similarity=-0.052 Sum_probs=37.1
Q ss_pred ccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecch
Q 010854 180 WVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 180 ~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
|..|... ....-..|..++.+....+++.+.+.+.++++.++...-
T Consensus 16 H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 16 HAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 7777654 444557899999998888899999999999999976553
No 153
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=68.43 E-value=24 Score=37.86 Aligned_cols=102 Identities=9% Similarity=-0.062 Sum_probs=74.2
Q ss_pred EEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|...+...+..+.. ..+++++|++...++-... .++..++++..|+..+.+.....++.+...++..++..++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45677776665544443 5688999998877765433 3344788899999999888788889999999999999999
Q ss_pred cchHHHHHHHccCCCCcccccceeEEEeec
Q 010854 223 TVPSLVKAWRNTNCLEGLDWTKIRSFASTG 252 (499)
Q Consensus 223 ~~P~~l~~l~~~~~~~~~~l~~l~~i~~~G 252 (499)
+....+..+.+... .++.++.++.-+
T Consensus 184 ~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 98888877765432 234555555544
No 154
>PLN02246 4-coumarate--CoA ligase
Probab=68.39 E-value=26 Score=36.06 Aligned_cols=97 Identities=14% Similarity=-0.012 Sum_probs=68.7
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++... + +..+|+..+...+..+.. ..+++++|++...++-+. ..+..+++++..|+..+.+++.
T Consensus 37 ~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~ 108 (537)
T PLN02246 37 SDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPF 108 (537)
T ss_pred CCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCC
Confidence 5667755321 1 235788777655444433 457899999888776553 2334488899999999999888
Q ss_pred CChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
...+.+...++..++..++........+
T Consensus 109 ~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 109 YTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 7888999999999999988876655443
No 155
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=67.75 E-value=26 Score=36.21 Aligned_cols=83 Identities=12% Similarity=-0.012 Sum_probs=64.9
Q ss_pred ecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHH
Q 010854 148 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
+|+..+..........+.-.++|++...+|-+.. ....+++++..|+..+.+......+.+...++..++..++....+
T Consensus 46 ~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~ 124 (539)
T PRK06334 46 LSYNQVRKAVIALATKVSKYPDQHIGIMMPASAG-AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQL 124 (539)
T ss_pred ccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchH-HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHH
Confidence 6888877777666666555689999887876544 333478999999999998877778899999999999999988776
Q ss_pred HHHH
Q 010854 228 VKAW 231 (499)
Q Consensus 228 l~~l 231 (499)
+..+
T Consensus 125 ~~~~ 128 (539)
T PRK06334 125 MQHL 128 (539)
T ss_pred HHHH
Confidence 6554
No 156
>PLN02654 acetate-CoA ligase
Probab=67.53 E-value=20 Score=38.13 Aligned_cols=97 Identities=13% Similarity=0.041 Sum_probs=69.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.... ..+ ....+|...+...+..+. ...+++++|++...+|.... ..+.+++++..|+..+.+.+
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCC
Confidence 356777653221 111 234578887766554444 35689999999988877542 23348889999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
.+..+.+...++..++..+++...
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 888899999999999999987654
No 157
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=67.47 E-value=32 Score=36.58 Aligned_cols=96 Identities=14% Similarity=-0.101 Sum_probs=69.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.... .|. ...+|...+...+..+. ...+++++|++...+|.+.. ..+.+++++..|+..+.+.+
T Consensus 97 ~~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 97 RDDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE-TVVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEeeCC
Confidence 357777664322 221 34578777665554443 34588999999988876533 34448899999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
....+.+...++..++..+++...
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccc
Confidence 888889999999999999887653
No 158
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=67.35 E-value=21 Score=37.72 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=68.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.. +..+|. .-.+|...+...+..+. ...+++++|++...+|..-. ..+.+++++..|+..+.+.+
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEecCC
Confidence 3567776543 222232 23567777655544443 45689999999988877532 33448899999999998888
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
....+.+...++..++..+++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 88888999999999999988754
No 159
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=67.34 E-value=29 Score=36.69 Aligned_cols=97 Identities=16% Similarity=0.039 Sum_probs=69.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.... . ......+|++.+...+..+.. ..+++++|++...++-... .++.+++++..|+..+.+.+
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCC
Confidence 367787764321 1 112456788877666554443 4588999999887766543 23348889999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
....+.+...++..++..++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 888899999999999999987654
No 160
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=66.42 E-value=25 Score=36.07 Aligned_cols=89 Identities=11% Similarity=-0.015 Sum_probs=70.0
Q ss_pred eEEecchhhHHHhhhcceec-----cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCe
Q 010854 145 AIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVT 219 (499)
Q Consensus 145 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t 219 (499)
+..+|+..+...+..++..+ +++.+|++....|-+..+.. ..+++.+.|+.+.-+.+..+...+...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~-~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE-LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 77888887766665555433 37889999988887654333 3678888999999998888899999999999999
Q ss_pred EEecchHHHHHHHcc
Q 010854 220 VLGTVPSLVKAWRNT 234 (499)
Q Consensus 220 ~l~~~P~~l~~l~~~ 234 (499)
+++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999988888777444
No 161
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=65.80 E-value=22 Score=37.45 Aligned_cols=97 Identities=18% Similarity=0.086 Sum_probs=69.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.... .+|. ...+|...+...+..+. ...+++++|++...+|.+.. .++.+++++..|+..+.+.+
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEeccCC
Confidence 457777764322 1222 34578777655544443 34689999999988876543 34448889999999999888
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...++.+...++..++..+++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 888899999999999999987654
No 162
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=65.53 E-value=22 Score=36.68 Aligned_cols=96 Identities=18% Similarity=0.102 Sum_probs=68.2
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++..-.+ .++...+|...+...+..+. ...++++++++...++-+..+ .+.+++.+..|+..+.+.+.
T Consensus 38 p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~ 113 (547)
T PRK13295 38 PDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPI 113 (547)
T ss_pred CCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccc
Confidence 466766543222 23334678777655544443 345889999998877765533 44588999999999988877
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+.+...++..++..+++...
T Consensus 114 ~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 114 FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cCHHHHHHHHHhcCceEEEEecc
Confidence 78889999999999999887653
No 163
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=64.34 E-value=44 Score=34.08 Aligned_cols=101 Identities=14% Similarity=0.044 Sum_probs=70.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.-.. .+.. -.+|...+......+.. ..++.++|++....+-+..+ ...+++++..|+.++.+.+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCc
Confidence 356677654321 1111 23576666555444433 46889999998876665432 2347889999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
....+.+...++..+++.++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 88889999999999999999888765443
No 164
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=63.94 E-value=39 Score=35.86 Aligned_cols=95 Identities=18% Similarity=-0.025 Sum_probs=68.5
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++++|++.... +|. ...+|...+...+..+.. ..+++++|++...+|.... ..+.+++++..|+..+.+.+.
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCCC
Confidence 35666655422 222 345788776665544443 4589999999988887643 334488899999999999888
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
+..+.+...+++.++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEccc
Confidence 88899999999999999987543
No 165
>PRK05857 acyl-CoA synthetase; Validated
Probab=63.78 E-value=29 Score=35.80 Aligned_cols=94 Identities=12% Similarity=-0.004 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++... | ...+|...+...+..+.. ..++++++++...++-+.. .++.+++++..|+..+.++.
T Consensus 27 ~p~~~a~~~~~-~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRCD-G------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeecC-C------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCc
Confidence 35667665432 2 134788777655554444 4578899999887765543 33448899999999999987
Q ss_pred CCChhHHHHHHHHhCCeEEecchHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
....+.+...++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 7788899999999999998887754
No 166
>PRK07788 acyl-CoA synthetase; Validated
Probab=63.41 E-value=25 Score=36.34 Aligned_cols=85 Identities=12% Similarity=-0.011 Sum_probs=64.2
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+. ...+++++|++...++-.- .....+++++..|+.++.+++....+.+...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 477777655544443 3457889999887765432 233448899999999999988888899999999999999999
Q ss_pred chHHHHHHH
Q 010854 224 VPSLVKAWR 232 (499)
Q Consensus 224 ~P~~l~~l~ 232 (499)
.+.+...+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887766553
No 167
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=63.09 E-value=20 Score=35.22 Aligned_cols=68 Identities=16% Similarity=0.081 Sum_probs=55.8
Q ss_pred ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 164 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 164 ~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
.+++.+|++...+|-.. ..++.+++++..|+.++.+++....+.+...+++.+++.++..+.....+.
T Consensus 20 ~g~~~gd~v~l~~~n~~-~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 87 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSA-ELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRLA 87 (408)
T ss_pred hCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhcc
Confidence 56889999988877763 234458899999999999987778889999999999999999888766553
No 168
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=63.07 E-value=74 Score=27.83 Aligned_cols=86 Identities=16% Similarity=0.044 Sum_probs=51.9
Q ss_pred EEEeecCc--cccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH---HH---HHHHccCCCCccc
Q 010854 171 VYCWPTNL--GWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS---LV---KAWRNTNCLEGLD 241 (499)
Q Consensus 171 ~~l~~~p~--~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~---~l---~~l~~~~~~~~~~ 241 (499)
+++...+. .|..|... ....-..|..++.+....+++.+.+.+++.+|+++...-+ .+ ..+.+..+..+.
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~- 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL- 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-
Confidence 44444443 38877765 3344468999998887778899999999999998754432 22 222222222211
Q ss_pred ccceeEEEeecCCCChh
Q 010854 242 WTKIRSFASTGETSNVD 258 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~ 258 (499)
...+ .+++||..++.+
T Consensus 163 ~~~~-~i~vGG~~~~~~ 178 (201)
T cd02070 163 RDKV-KVMVGGAPVNQE 178 (201)
T ss_pred CcCC-eEEEECCcCCHH
Confidence 0122 367788777654
No 169
>PRK13388 acyl-CoA synthetase; Provisional
Probab=62.84 E-value=42 Score=34.60 Aligned_cols=84 Identities=13% Similarity=-0.074 Sum_probs=62.4
Q ss_pred EecchhhHHHhhhcce---eccC-cCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWA---HIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~-~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|+..+......+.. ..++ .+++++...++-+.. ..+..++++..|+.++.+++....+.+...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 5677776655554443 4467 688888877775543 3335889999999999998777888999999999999999
Q ss_pred cchHHHHHH
Q 010854 223 TVPSLVKAW 231 (499)
Q Consensus 223 ~~P~~l~~l 231 (499)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877655433
No 170
>PRK08315 AMP-binding domain protein; Validated
Probab=62.37 E-value=31 Score=35.72 Aligned_cols=92 Identities=13% Similarity=-0.001 Sum_probs=66.1
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++....+ ..+|+..+......+. ...++.+++++....+-... .+..+++.+..|+..+.+++.
T Consensus 30 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~ 101 (559)
T PRK08315 30 PDREALVYRDQG-------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPE-WVLTQFATAKIGAILVTINPA 101 (559)
T ss_pred CCCeEEEEcCCC-------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHHhCeEEEecCcc
Confidence 456666543221 3468877655444333 34578999998887666532 344589999999999999888
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+.+...+++.+++.++....
T Consensus 102 ~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 102 YRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred CCHHHHHHHHHhcCCCEEEEecc
Confidence 78889999999999999887654
No 171
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=62.18 E-value=91 Score=27.19 Aligned_cols=86 Identities=14% Similarity=0.014 Sum_probs=54.4
Q ss_pred EEEeecCc--cccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHH------HHHHHccCCCCccc
Q 010854 171 VYCWPTNL--GWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL------VKAWRNTNCLEGLD 241 (499)
Q Consensus 171 ~~l~~~p~--~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~------l~~l~~~~~~~~~~ 241 (499)
+++..++. .|..|... ....-..|..++.+..+.+++.+.+.+++++|+++...-++ +..+.+..+..+.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 44444544 48778655 44445689999999888888999999999999997655332 2233322222211
Q ss_pred ccceeEEEeecCCCChh
Q 010854 242 WTKIRSFASTGETSNVD 258 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~ 258 (499)
.+.+ .+++||.+++++
T Consensus 165 ~~~v-~i~vGG~~~~~~ 180 (197)
T TIGR02370 165 RDSV-KFMVGGAPVTQD 180 (197)
T ss_pred CCCC-EEEEEChhcCHH
Confidence 0122 378888887654
No 172
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=62.13 E-value=35 Score=35.37 Aligned_cols=82 Identities=18% Similarity=0.117 Sum_probs=62.2
Q ss_pred EecchhhHHHhhhccee----ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWAH----IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|+..+......+... .++.++|++...++-+.. ....+++.+..|+.++.+++....+.+...++..++..++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~-~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii 127 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ-YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEE
Confidence 57887776655555432 478899999887776543 3334888999999999998777888999999999999998
Q ss_pred cchHHHH
Q 010854 223 TVPSLVK 229 (499)
Q Consensus 223 ~~P~~l~ 229 (499)
....+..
T Consensus 128 ~~~~~~~ 134 (562)
T PRK05677 128 CLANMAH 134 (562)
T ss_pred Eecchhh
Confidence 7665544
No 173
>PLN02614 long-chain acyl-CoA synthetase
Probab=62.05 E-value=57 Score=34.79 Aligned_cols=86 Identities=5% Similarity=-0.181 Sum_probs=65.0
Q ss_pred EEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|+..+...+..+. ...+++++|++...++-+.. .++..++++..|+..+-+.+...++.+...++..++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 3467776655544443 34688999999887776543 3344888999999999998888889999999999999999
Q ss_pred cchHHHHHHH
Q 010854 223 TVPSLVKAWR 232 (499)
Q Consensus 223 ~~P~~l~~l~ 232 (499)
.....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 8877665553
No 174
>PRK07798 acyl-CoA synthetase; Validated
Probab=61.95 E-value=42 Score=34.31 Aligned_cols=85 Identities=11% Similarity=-0.090 Sum_probs=62.1
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+. ...+++.+|++...++-.. -.+...++.+..|+..+.++.....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 467776655444333 3457888999887664432 233448888999999999988878889999999999999988
Q ss_pred chHHHHHHH
Q 010854 224 VPSLVKAWR 232 (499)
Q Consensus 224 ~P~~l~~l~ 232 (499)
.......+.
T Consensus 107 ~~~~~~~~~ 115 (533)
T PRK07798 107 EREFAPRVA 115 (533)
T ss_pred chhhHHHHH
Confidence 877655543
No 175
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=61.18 E-value=36 Score=34.64 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=64.1
Q ss_pred EecchhhHHHhhh---cceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|++.+...+.. .....++.+++++...++-+.. .++.+++++..|+..+.++.....+.+...+++.+++.++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLE-TVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 4677766544333 3334578889999887766443 34448889999999999988888899999999999999998
Q ss_pred chHHHHHHHc
Q 010854 224 VPSLVKAWRN 233 (499)
Q Consensus 224 ~P~~l~~l~~ 233 (499)
.+..+..+..
T Consensus 104 ~~~~~~~~~~ 113 (515)
T TIGR03098 104 SSERLDLLHP 113 (515)
T ss_pred ccchhhhhHh
Confidence 8877665543
No 176
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=60.47 E-value=33 Score=36.17 Aligned_cols=96 Identities=14% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++. .+..+|. ...+|...+...+..+. ...+++++|++...+|.... ..+.+++++..|+..+.+.+
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCC
Confidence 357777654 3322222 34567777665544433 34689999999988876543 33348889999999998888
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
....+.+...++..++..+++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 88888999999999999998754
No 177
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.37 E-value=27 Score=35.97 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=64.2
Q ss_pred EecchhhHHHhhhcce---ec-cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWA---HI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|+..+...+..+.. .. +++.++++...++-+. ..+..+++++..|+..+.+++....+.+...++..+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 3677766555444433 33 8889999988777543 34445889999999999998877888999999999999999
Q ss_pred cchHHHHHHH
Q 010854 223 TVPSLVKAWR 232 (499)
Q Consensus 223 ~~P~~l~~l~ 232 (499)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8887665553
No 178
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=58.89 E-value=33 Score=35.41 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=66.3
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..++++++++....+-...+ +...++.+..|+..+.+.+....+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 4677766555544443 45788999998877765543 4458899999999999988888899999999999999999
Q ss_pred chHHHHHHHc
Q 010854 224 VPSLVKAWRN 233 (499)
Q Consensus 224 ~P~~l~~l~~ 233 (499)
.......+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 179
>PRK07514 malonyl-CoA synthase; Validated
Probab=58.43 E-value=33 Score=34.86 Aligned_cols=85 Identities=13% Similarity=0.060 Sum_probs=63.7
Q ss_pred EEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|...+...+.... ...++.++|++...++... -..+.+++.+..|+..+.+++....+.+...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 3567766654443333 3467899999988777653 33445889999999999998877888999999999999998
Q ss_pred cchHHHHHH
Q 010854 223 TVPSLVKAW 231 (499)
Q Consensus 223 ~~P~~l~~l 231 (499)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887766544
No 180
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=58.07 E-value=36 Score=35.16 Aligned_cols=97 Identities=16% Similarity=0.069 Sum_probs=68.1
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++.... | ..+|+..+...+..+.. ..++.+++++...++-...+ ...+++++..|+..+.++..
T Consensus 42 p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~ 113 (546)
T PLN02330 42 ADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPT 113 (546)
T ss_pred CCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCcc
Confidence 56666653221 1 35788777665544443 45788999998877665533 23478899999999888777
Q ss_pred CChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
...+.+...+++.++..++..+..+..+
T Consensus 114 ~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 114 ALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred CCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 7778899999999999998876655443
No 181
>PLN02574 4-coumarate--CoA ligase-like
Probab=58.01 E-value=35 Score=35.40 Aligned_cols=98 Identities=19% Similarity=0.074 Sum_probs=68.8
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---ee-ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~-~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
++.++++.. .+|. .+|+..+...+..+. .. .+++++|++...++-.. ..+..+++++..|+..+.+++
T Consensus 53 ~~~~a~~~~---~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p 124 (560)
T PLN02574 53 NGDTALIDS---STGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNP 124 (560)
T ss_pred CCCCEEEEC---CCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCc
Confidence 466666542 2221 357766554443333 34 67899999988877543 334447899999999999987
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
....+.+...++..++..++..+..+..+.
T Consensus 125 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 125 SSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred ccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 778888999999999999988887766553
No 182
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.06 E-value=34 Score=35.54 Aligned_cols=84 Identities=11% Similarity=-0.044 Sum_probs=64.3
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+.... ...+++.+|++...++-... .+...++.+..|+..+.+.+....+.+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 367776655544443 34578899999888776554 33458899999999999988888899999999999999998
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 183
>PRK13391 acyl-CoA synthetase; Provisional
Probab=57.02 E-value=53 Score=33.48 Aligned_cols=98 Identities=15% Similarity=0.007 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.++++...++ -.+|...+...+..+. ...++.+++++....+-+.. .+..+++.+..|+..+.++.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecccc
Confidence 4566776654432 2367776655444333 34578889999877666543 33348889999999999987
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
....+.+...++..++..++..+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 77888999999999999998888765543
No 184
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=56.75 E-value=40 Score=34.68 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=65.4
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++..-.... ....+|+..+......+. ...++++++++...++-+.. .++.+++.+..|+.++.+.+.
T Consensus 36 p~~~a~~~~~~~~~---~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~ 111 (538)
T TIGR03208 36 PDKPALTAYRDGHG---AVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWE-FTALYLACARIGAVLNPLMPI 111 (538)
T ss_pred CCceEEEeecccCC---CcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeccCcc
Confidence 45666654311111 123567776655444333 34578899999887775442 344478899999999988777
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+.+...++..+++.++..+.
T Consensus 112 ~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 112 FRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred cCHHHHHHHHHhcCCeEEEEccc
Confidence 77889999999999999887654
No 185
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=56.63 E-value=41 Score=35.80 Aligned_cols=86 Identities=9% Similarity=-0.111 Sum_probs=65.9
Q ss_pred EEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|+..+...+..+.. ..+++++|++...++-+.. .++..++++..|+..+-+.+....+.+...+++.+++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45788777665554443 4578999999887776533 3344889999999999888888889999999999999999
Q ss_pred cchHHHHHHH
Q 010854 223 TVPSLVKAWR 232 (499)
Q Consensus 223 ~~P~~l~~l~ 232 (499)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8777666554
No 186
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=56.53 E-value=39 Score=35.06 Aligned_cols=81 Identities=17% Similarity=0.075 Sum_probs=60.3
Q ss_pred EecchhhHHHhhhccee----ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWAH----IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|...+......+... .+++++|++...++-+.. ....+++++..|+..+.+.+....+.+...+++.++..++
T Consensus 49 ~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i 127 (562)
T PRK12492 49 TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEE
Confidence 56777766555444432 378899999887666543 3344888999999999888777888999999999999988
Q ss_pred cchHHH
Q 010854 223 TVPSLV 228 (499)
Q Consensus 223 ~~P~~l 228 (499)
..+.+.
T Consensus 128 ~~~~~~ 133 (562)
T PRK12492 128 YLNMFG 133 (562)
T ss_pred eccccc
Confidence 766443
No 187
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=56.32 E-value=67 Score=32.38 Aligned_cols=95 Identities=16% Similarity=0.004 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.+|.+|++.. .-.+|+..+...+.... ...++.+++++...++-... .+..+++.+..|+..+.++.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGME-MILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhCCcEEEecCc
Confidence 3567776532 13477777655544443 34568899999887776654 34558899999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
....+.+...+++.++..++........
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 112 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEAK 112 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhHH
Confidence 7788889999999999988776554433
No 188
>PRK13383 acyl-CoA synthetase; Provisional
Probab=55.02 E-value=39 Score=34.59 Aligned_cols=85 Identities=9% Similarity=-0.052 Sum_probs=62.7
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..++.+++++...++-+-. ....+++.+..|+..+.+++....+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 3666666544444333 4578899999877765432 23347789999999999988888899999999999999998
Q ss_pred chHHHHHHH
Q 010854 224 VPSLVKAWR 232 (499)
Q Consensus 224 ~P~~l~~l~ 232 (499)
.+...+.+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887665543
No 189
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=54.76 E-value=41 Score=39.49 Aligned_cols=99 Identities=15% Similarity=0.005 Sum_probs=68.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++...+...+......+|+..+...+..+.. ..++++++++...++-+.. .++.+++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEeccCC
Confidence 4677776643221111112345788777666555544 3578999999887776643 23448899999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
...++.+...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 87888888999999998877643
No 190
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=54.29 E-value=77 Score=27.00 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=38.8
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC
Q 010854 396 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP 459 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~ 459 (499)
...|++.+. ..++|.++.|+...+ ...+++-+- .. .....++++.+.+.+.+..+.
T Consensus 77 a~~i~~~v~-~~~~V~~A~vvv~~~-----~a~Vav~~~-~~-~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 77 ADRIANRVK-KVPGVEDATVVVTDD-----NAYVAVDLD-FN-RFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHh-cCCCceEEEEEEECC-----EEEEEEEec-cc-ccchhHHHHHHHHHHHHhCCC
Confidence 467888886 899999999998763 555555443 22 345567888888777665553
No 191
>PRK05850 acyl-CoA synthetase; Validated
Probab=54.02 E-value=1e+02 Score=32.08 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=67.9
Q ss_pred CCCCeEEEEecC-C-CCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEec
Q 010854 126 PVDAVVNILFSS-G-TTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 200 (499)
Q Consensus 126 ~~~~~a~i~~TS-G-tTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 200 (499)
.++.+|++.... + ..|. ...+|+..+...+..+.. ..+ .++|++...++-+. -....+++++..|+.++.+
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEec
Confidence 356676654321 1 1122 245788776555444433 334 57899888777653 3344588899999999988
Q ss_pred CCC---CChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 201 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 201 ~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
+.. ...+.+...++..++..++..+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 642 24577888999999999999887766553
No 192
>PRK09088 acyl-CoA synthetase; Validated
Probab=53.58 E-value=66 Score=32.51 Aligned_cols=92 Identities=12% Similarity=-0.021 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+++.....| ..+|+..+...+.... ...++..++++...++-... .++.+++++..|+..+.+.+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCc
Confidence 3566665543232 2467777655544333 34578899998877766554 33448899999999999887
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
...++.+...+++.+++.++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 77888999999999999997755
No 193
>PRK07529 AMP-binding domain protein; Validated
Probab=53.58 E-value=62 Score=34.23 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=64.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhc---ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.+..+.. ..+...+|+..+...+..+ ....+++++|++...+|-+..+ ++.+++++..|. ++.+.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 356677765533211 1234567887765544443 3456889999999888865432 334777777884 455556
Q ss_pred CCChhHHHHHHHHhCCeEEecch
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
...++.+...++..++..++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEeC
Confidence 66788999999999999998853
No 194
>PRK12583 acyl-CoA synthetase; Provisional
Probab=52.48 E-value=67 Score=33.14 Aligned_cols=92 Identities=12% Similarity=-0.036 Sum_probs=66.3
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.+|++..-. +..+|...+...+..+. ...++.+++++....+-... ..+..++.+..|+..+.+.+.
T Consensus 32 p~~~a~~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~v~l~~~ 103 (558)
T PRK12583 32 PDREALVVRHQ-------ALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAE-WLLTQFATARIGAILVNINPA 103 (558)
T ss_pred CCCeEEEecCC-------CcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHhhCCEEEecCCC
Confidence 46666654211 23468877755544433 34578899998887665543 344588999999999999888
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+.+...+++.+++.++..+.
T Consensus 104 ~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 104 YRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred CCHHHHHHHHHhcCCcEEEEecc
Confidence 88899999999999999887664
No 195
>PRK13382 acyl-CoA synthetase; Provisional
Probab=52.32 E-value=50 Score=34.04 Aligned_cols=82 Identities=12% Similarity=-0.082 Sum_probs=61.6
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+. ...++++++++...++-+.. .+..+++.+..|+.++.+.+....+.+...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 467766655444433 34578899999888875543 34458899999999999987777889999999999999987
Q ss_pred chHHHH
Q 010854 224 VPSLVK 229 (499)
Q Consensus 224 ~P~~l~ 229 (499)
...+..
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 665543
No 196
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=51.50 E-value=47 Score=34.38 Aligned_cols=95 Identities=19% Similarity=0.124 Sum_probs=68.3
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce----eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
++.+|++.. | ..+|+..+......+.. ..++++++++...++-... .+..+++++..|+..+.+++
T Consensus 39 ~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p 108 (560)
T PRK08751 39 ADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNP 108 (560)
T ss_pred CCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCc
Confidence 566776532 2 24677776655544443 3578999999887766543 23448889999999999887
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
....+.+...+++.+++.++........+
T Consensus 109 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 109 LYTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred cCCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 77888899999999999999877665443
No 197
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=51.20 E-value=53 Score=34.38 Aligned_cols=84 Identities=14% Similarity=-0.050 Sum_probs=63.1
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+......+. ...++++++++...++-+.. .+..+++++..|+..+.++.....+.+...++..++..++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~-~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPE-YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 467776655544433 34578899999887766543 24458899999999999987778888999999999999998
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 87665544
No 198
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=50.89 E-value=54 Score=30.31 Aligned_cols=61 Identities=20% Similarity=0.237 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCcH-HHHHHHHHHHHhCcEE-EEcCCCCCHHHHHHHhhcCCeeEEEeccccc
Q 010854 2 FSKGDAIAIDMPMTV-RAVIIYLAIILAGYVV-VSIADSFAAREIATRLRVSKAKGIFTQDFIL 63 (499)
Q Consensus 2 v~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 63 (499)
+.+||.|.-...||. --.+..+|- ..|.-. --+..+...+++...|+..++..+|+++++.
T Consensus 158 L~~GD~vIQNganS~VG~~ViQlak-a~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 158 LNKGDSVIQNGANSGVGQAVIQLAK-ALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred cCCCCeeeecCcccHHHHHHHHHHH-HhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 678999999999984 444444444 344433 3455677889999999999999999998753
No 199
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.32 E-value=84 Score=32.70 Aligned_cols=85 Identities=12% Similarity=-0.053 Sum_probs=63.8
Q ss_pred EEecchhhHHHhhhcce----eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEE
Q 010854 146 IPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 221 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l 221 (499)
-.+|...+...+..... ..+++++|++...++-+... +..+++.+..|+..+.+++....+.+...++..++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH-LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVI 115 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEE
Confidence 45677766555444443 25788999988877765432 34488899999999999888788999999999999999
Q ss_pred ecchHHHHHH
Q 010854 222 GTVPSLVKAW 231 (499)
Q Consensus 222 ~~~P~~l~~l 231 (499)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (576)
T PRK05620 116 VADPRLAEQL 125 (576)
T ss_pred EEChhhHHHH
Confidence 9888766554
No 200
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=48.07 E-value=1.3e+02 Score=32.06 Aligned_cols=84 Identities=7% Similarity=-0.202 Sum_probs=62.7
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..++.++|++...++-... ..+..++++..|+..+-+.+...++.+...++..+++.++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 4577766665544443 4588999998877766543 33347888999999998887888899999999999999998
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
....+..+
T Consensus 155 ~~~~~~~~ 162 (660)
T PLN02430 155 QDKKIKEL 162 (660)
T ss_pred CHHHHHHH
Confidence 77654443
No 201
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=48.05 E-value=47 Score=32.88 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=52.5
Q ss_pred eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH
Q 010854 162 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 162 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+++.+|++...++-+. ..+..+++.+..|+..+.+++....+.+...+++.++..++..+.
T Consensus 17 ~~~g~~~gd~v~i~~~~~~-~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 17 KAQGIRSGSRVALVGQNSI-EMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHhCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 4467899999988777764 344458899999999999988888889999999999999887665
No 202
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=47.69 E-value=1.5e+02 Score=31.19 Aligned_cols=102 Identities=17% Similarity=0.025 Sum_probs=66.6
Q ss_pred CCCeEEEEec--CCCCCCCceEEecchhhHHHhhhcceec--cCcCCcEEEeecCccccchhhhhhhhhccCcEEEec-C
Q 010854 127 VDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY-Q 201 (499)
Q Consensus 127 ~~~~a~i~~T--SGtTG~pk~v~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~ 201 (499)
++.+|++... .+++|. ...+|+..+...+..+...+ .++++|++...++-... .++.+++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecCC
Confidence 5667765432 112232 33578877665554443322 27899999888877643 334488899999988866 3
Q ss_pred CCCC--hhHHHHHHHHhCCeEEecchHHHHHH
Q 010854 202 GSPL--ERSFGKFVQDAGVTVLGTVPSLVKAW 231 (499)
Q Consensus 202 ~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~l 231 (499)
+... .+.+...++..++..++..+.....+
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 3333 57788999999999999887765543
No 203
>PRK06178 acyl-CoA synthetase; Validated
Probab=47.19 E-value=65 Score=33.41 Aligned_cols=86 Identities=16% Similarity=-0.015 Sum_probs=65.3
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+.. ..++++++++...++-... ....+++.+..|+..+.+++......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4677776555444433 4578899998877776654 33458889999999998887778889999999999999999
Q ss_pred chHHHHHHHc
Q 010854 224 VPSLVKAWRN 233 (499)
Q Consensus 224 ~P~~l~~l~~ 233 (499)
.+.....+.+
T Consensus 137 ~~~~~~~l~~ 146 (567)
T PRK06178 137 LDQLAPVVEQ 146 (567)
T ss_pred ccchHHHHHH
Confidence 8887766543
No 204
>PLN02479 acetate-CoA ligase
Probab=46.99 E-value=64 Score=33.48 Aligned_cols=82 Identities=7% Similarity=-0.083 Sum_probs=61.8
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+......+.. ..+++++|++...++-+.. .+...++++..|+..+.+.+....+.+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 4677666555444443 4578999999887775432 33347889999999999988878889999999999999998
Q ss_pred chHHHH
Q 010854 224 VPSLVK 229 (499)
Q Consensus 224 ~P~~l~ 229 (499)
.+.++.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 877643
No 205
>PRK07470 acyl-CoA synthetase; Validated
Probab=46.93 E-value=67 Score=32.87 Aligned_cols=82 Identities=12% Similarity=0.006 Sum_probs=60.5
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|++.+...+.... ...++++++++....+-... ....+++++..|+..+.++.....+.+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 110 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQ-MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMIC 110 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEE
Confidence 467776654443333 34578899998877665442 23347899999999999988888889999999999999988
Q ss_pred chHHHH
Q 010854 224 VPSLVK 229 (499)
Q Consensus 224 ~P~~l~ 229 (499)
.+.+.+
T Consensus 111 ~~~~~~ 116 (528)
T PRK07470 111 HADFPE 116 (528)
T ss_pred cchhHH
Confidence 876543
No 206
>PRK13390 acyl-CoA synthetase; Provisional
Probab=46.82 E-value=1.1e+02 Score=31.03 Aligned_cols=93 Identities=18% Similarity=0.120 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.++++... +| ..+|...+......+.. ..++.++|++...++-+.. .+..+++.+..|+..+.+.+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEecccc
Confidence 35666665422 12 34788777555544443 4578899998887666543 33448889999999998887
Q ss_pred CCChhHHHHHHHHhCCeEEecchH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...++.+...++..++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 778888989999999888876554
No 207
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.60 E-value=1e+02 Score=31.81 Aligned_cols=92 Identities=20% Similarity=0.100 Sum_probs=65.5
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhccee---ccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++..+.+...-+. .+|+..+...+...... .+++++|++...++-+.. .+..+++++..|+..+.+.+.
T Consensus 25 ~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e-~~~~~~a~~~~Gav~vpln~~ 96 (534)
T COG0318 25 PDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPE-FLIAFLAALRAGAVAVPLNPR 96 (534)
T ss_pred CCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeecCcc
Confidence 4666665543332 67888776666555443 357789998877766532 233478888899999999877
Q ss_pred CChhHHHHHHHHhCCeEEecchH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
...+.+...++..++..++....
T Consensus 97 ~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 97 LTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred cCHHHHHHHHHhcCCeEEEEccc
Confidence 77788888888888888888765
No 208
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=46.04 E-value=91 Score=28.54 Aligned_cols=60 Identities=12% Similarity=0.168 Sum_probs=44.4
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHh--------CcEEEEcCCC---CCHHHHHHHhhcCCeeEEEecc
Q 010854 1 MFSKGDAIAIDMPMTVRAVIIYLAIILA--------GYVVVSIADS---FAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 1 ~v~~gd~V~i~~~~~~~~~~~~lA~~~~--------G~~~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
|+.+||+|++.+.-+.|+++.+..+... ...++.++.. ...+.+..+.+..+....+.+.
T Consensus 25 li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~~ 95 (258)
T PRK10696 25 MIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEEQ 95 (258)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEEe
Confidence 5789999999999999999887777443 2466667654 3445567778888888777653
No 209
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=46.02 E-value=1e+02 Score=24.30 Aligned_cols=46 Identities=11% Similarity=-0.023 Sum_probs=35.9
Q ss_pred ccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecch
Q 010854 180 WVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 180 ~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
|..|... ....-..|..++.+....+++.+.+.+.+.+++++...-
T Consensus 12 H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 12 HDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 6667654 444556788888888777889999999999999976653
No 210
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=45.57 E-value=61 Score=33.00 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=62.6
Q ss_pred EecchhhHHHhh---hcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+. ......++.+++++...++-... .....++.+..|+..+.+.+....+.+...++..+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 356665544433 33344678999999877766543 33448888999999999988888889999999999999998
Q ss_pred chHHHHHHH
Q 010854 224 VPSLVKAWR 232 (499)
Q Consensus 224 ~P~~l~~l~ 232 (499)
.....+.+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 777666543
No 211
>PRK08162 acyl-CoA synthetase; Validated
Probab=45.48 E-value=60 Score=33.44 Aligned_cols=84 Identities=12% Similarity=-0.074 Sum_probs=64.4
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+......+.. ..+++.+|++...++-... .+..+++.+..|+..+.+.+....+.+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 4777776655544443 3578999999887776542 23348889999999999988888899999999999999999
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.+.+...+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88776554
No 212
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.29 E-value=61 Score=32.92 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=62.0
Q ss_pred ecchhhHHHhhh---cceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecc
Q 010854 148 WTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 224 (499)
Q Consensus 148 ~s~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 224 (499)
+|...+...+.. .....++++++++....+-+.. .+..+++++..|+..+.+++....+.+...+++.+++.++..
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 566655444333 3334578999999887766532 344588999999999999877788899999999999999888
Q ss_pred hHHHHHH
Q 010854 225 PSLVKAW 231 (499)
Q Consensus 225 P~~l~~l 231 (499)
+.....+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7766554
No 213
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=44.38 E-value=57 Score=33.83 Aligned_cols=79 Identities=14% Similarity=-0.090 Sum_probs=59.5
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..+++++|++...++-+.. .+..+++.+..|+.++.+++....+.+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~-~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDL-YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 4677766555544443 4589999999887776543 22337888999999999988888899999999999999887
Q ss_pred chH
Q 010854 224 VPS 226 (499)
Q Consensus 224 ~P~ 226 (499)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 214
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=44.10 E-value=1.3e+02 Score=26.75 Aligned_cols=88 Identities=10% Similarity=-0.009 Sum_probs=54.8
Q ss_pred cEEEeecC-ccccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHH---H---HHHHccCCCCccc
Q 010854 170 DVYCWPTN-LGWVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL---V---KAWRNTNCLEGLD 241 (499)
Q Consensus 170 ~~~l~~~p-~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~---l---~~l~~~~~~~~~~ 241 (499)
.+++.+.+ =.|..|... ...--..|..++.+..+.+++.+.+.+.+.+|+++...-.+ . +.+++.....+.
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~- 168 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI- 168 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC-
Confidence 33443333 337777654 44444689999999888889999999999999997554332 2 222222222221
Q ss_pred ccceeEEEeecCCCChhhHH
Q 010854 242 WTKIRSFASTGETSNVDDDL 261 (499)
Q Consensus 242 l~~l~~i~~~G~~l~~~~~~ 261 (499)
.++ +++||.+++.+..+
T Consensus 169 --~~~-i~vGG~~~~~~~~~ 185 (213)
T cd02069 169 --KIP-LLIGGAATSRKHTA 185 (213)
T ss_pred --CCe-EEEEChhcCHHHHh
Confidence 232 67788777766443
No 215
>PRK12582 acyl-CoA synthetase; Provisional
Probab=42.89 E-value=56 Score=34.48 Aligned_cols=79 Identities=9% Similarity=-0.039 Sum_probs=57.0
Q ss_pred EEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCCh-----hHHHHHHHHhC
Q 010854 146 IPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE-----RSFGKFVQDAG 217 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~-----~~~~~~i~~~~ 217 (499)
-.+|+..+...+..+.. ..+++++|++...++-. .-.++..++++..|+..+.+.+.... +.+...++..+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46788777665554443 45789999998887744 33344588899999999988755442 67888899999
Q ss_pred CeEEecch
Q 010854 218 VTVLGTVP 225 (499)
Q Consensus 218 ~t~l~~~P 225 (499)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887654
No 216
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=42.76 E-value=73 Score=32.92 Aligned_cols=83 Identities=12% Similarity=-0.008 Sum_probs=62.2
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+.. ..++.++|++...++-+.. .....++.+..|+..+.+++....+.+...+++.+++.++.
T Consensus 48 ~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~ 126 (557)
T PRK07059 48 AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVV 126 (557)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEE
Confidence 5788777655544443 4578899998877666543 23347889999999998887777889999999999999988
Q ss_pred chHHHHH
Q 010854 224 VPSLVKA 230 (499)
Q Consensus 224 ~P~~l~~ 230 (499)
...+...
T Consensus 127 ~~~~~~~ 133 (557)
T PRK07059 127 LENFATT 133 (557)
T ss_pred chhhHHH
Confidence 7765443
No 217
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.79 E-value=72 Score=32.86 Aligned_cols=83 Identities=12% Similarity=-0.014 Sum_probs=61.1
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+......+. ...++.++|++...++.... ....+++.+..|+.++.+.+...++.+...++..++..++.
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 117 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYR-HLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLF 117 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEE
Confidence 367776655444333 34678999999888776542 23347888899999998887777888999999999999888
Q ss_pred chHHHHH
Q 010854 224 VPSLVKA 230 (499)
Q Consensus 224 ~P~~l~~ 230 (499)
.+.+...
T Consensus 118 ~~~~~~~ 124 (539)
T PRK07008 118 DLTFLPL 124 (539)
T ss_pred cchhHHH
Confidence 7766543
No 218
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=40.86 E-value=65 Score=33.20 Aligned_cols=77 Identities=10% Similarity=-0.049 Sum_probs=57.5
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+. ...+++++|++...++-+. -.+..+++++..|+.++.+++....+.+...++..++..++.
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 127 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFA 127 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEE
Confidence 467776655443333 3468899999987765543 234458899999999998887778888999999999998876
Q ss_pred c
Q 010854 224 V 224 (499)
Q Consensus 224 ~ 224 (499)
.
T Consensus 128 ~ 128 (547)
T PRK06087 128 P 128 (547)
T ss_pred e
Confidence 4
No 219
>PRK07867 acyl-CoA synthetase; Validated
Probab=40.70 E-value=97 Score=31.85 Aligned_cols=84 Identities=12% Similarity=-0.065 Sum_probs=61.6
Q ss_pred EecchhhHHHhhhcceec----cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWAHI----DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~~~----~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|...+...+..+...+ +.++++++...++-.. .....+++++..|+.++.+++....+.+...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 467777666655554433 4567788776666433 23344889999999999998788889999999999999999
Q ss_pred cchHHHHHH
Q 010854 223 TVPSLVKAW 231 (499)
Q Consensus 223 ~~P~~l~~l 231 (499)
........+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 988766533
No 220
>PRK06164 acyl-CoA synthetase; Validated
Probab=40.54 E-value=63 Score=33.21 Aligned_cols=80 Identities=13% Similarity=0.006 Sum_probs=59.8
Q ss_pred EecchhhHHHhhhc---ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+ ....++++++++...++-+.. .+...++.+..|+..+.+++....+.+...+++.+++.++.
T Consensus 35 ~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~ 113 (540)
T PRK06164 35 PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIE-WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVV 113 (540)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHH-HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEE
Confidence 46777665444333 334678899999887776642 33448889999999999987778889999999999999987
Q ss_pred chHH
Q 010854 224 VPSL 227 (499)
Q Consensus 224 ~P~~ 227 (499)
.+.+
T Consensus 114 ~~~~ 117 (540)
T PRK06164 114 WPGF 117 (540)
T ss_pred cccc
Confidence 6653
No 221
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=40.45 E-value=1.6e+02 Score=24.71 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHHHHHhhcCccceeeeEEEeCCCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHh
Q 010854 397 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQS 455 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~~~~~~ 455 (499)
+.|.+.+. ..|+|.++.++...+ ..++++- +..+. ....+++++.+.+.+++
T Consensus 57 ~~Ia~~v~-~v~~V~dA~vvVtg~-----~A~Vgv~-~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 57 DEIASEAA-KVKGVKDATVVITGN-----YAYVGVD-LTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHh-cCCCCceEEEEEECC-----EEEEEEE-cCCCcchhhHHHHHHHHHHHHHh
Confidence 45677775 899999999998763 4555443 33222 22235666666666654
No 222
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.42 E-value=1.3e+02 Score=30.92 Aligned_cols=83 Identities=14% Similarity=-0.079 Sum_probs=60.9
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+......+. ...++++++++...++-... .+..+++.+..|+..+.+.+......+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 467776655444333 34578899998877765443 24458889999999998887777888999999999999988
Q ss_pred chHHHHH
Q 010854 224 VPSLVKA 230 (499)
Q Consensus 224 ~P~~l~~ 230 (499)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7765543
No 223
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.02 E-value=69 Score=33.12 Aligned_cols=82 Identities=17% Similarity=0.086 Sum_probs=59.9
Q ss_pred EecchhhHHHhhhcce----eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 147 PWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
.+|...+......+.. ..++++++++....+-.. -.++.+++++..|+..+.+++....+.+.+.+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL-QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 4677666555444433 247889999887765542 23344789999999999998777888999999999999998
Q ss_pred cchHHHH
Q 010854 223 TVPSLVK 229 (499)
Q Consensus 223 ~~P~~l~ 229 (499)
..+....
T Consensus 127 ~~~~~~~ 133 (560)
T PRK08974 127 IVSNFAH 133 (560)
T ss_pred EeccccH
Confidence 7765433
No 224
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=39.64 E-value=68 Score=31.82 Aligned_cols=61 Identities=15% Similarity=0.095 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcCCc--HHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEeccccc
Q 010854 2 FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 63 (499)
Q Consensus 2 v~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 63 (499)
+.+||+|..+..-+ ..-+-..+|+.++|+.++|+.+. .-+....++++.++.+|.+.+++.
T Consensus 131 ~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~~tps~~ 193 (438)
T COG1541 131 VRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIAATPSYL 193 (438)
T ss_pred CCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEEEChHHH
Confidence 57899998887722 12266788999999999999884 345667889999999999988753
No 225
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=39.23 E-value=1.2e+02 Score=34.70 Aligned_cols=99 Identities=9% Similarity=0.002 Sum_probs=71.1
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcceec--cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 125 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 125 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
..++.+|++.. .| -.+|...+..........+ .+.++|++...+|-+.. .....++.+..|+..+.+.+
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVA-GALANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchH-HHHHHHHHHHcCCEEEEeCC
Confidence 45777777532 11 1467776665554444332 35789999887776643 23448899999999998887
Q ss_pred CCChhHHHHHHHHhCCeEEecchHHHHHHH
Q 010854 203 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 232 (499)
...++.+...+++.+++.++..+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 778899999999999999999888777664
No 226
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=38.85 E-value=1.1e+02 Score=31.07 Aligned_cols=84 Identities=8% Similarity=-0.029 Sum_probs=60.4
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+.... ...++++++++...++-.. ..+...++++..|+..+.+++....+.+...+++.+++.++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~ 108 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGV-DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFV 108 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEE
Confidence 456666654443332 3457889999887655442 223348889999999999987778889999999999999988
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.......+
T Consensus 109 ~~~~~~~~ 116 (508)
T TIGR02262 109 SGELLPVI 116 (508)
T ss_pred chhhHHHH
Confidence 77655443
No 227
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=38.78 E-value=1.1e+02 Score=32.96 Aligned_cols=88 Identities=8% Similarity=-0.047 Sum_probs=65.2
Q ss_pred eEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEE
Q 010854 145 AIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 221 (499)
Q Consensus 145 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l 221 (499)
...+|+..+...+..+.. ..+++++|++...++-... ..+..++++..|+..+-+.....++.+...++..++..+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWE-WLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 467788777666555443 4588999999877775432 233478888999998888777778889999999999999
Q ss_pred ecchHHHHHHHc
Q 010854 222 GTVPSLVKAWRN 233 (499)
Q Consensus 222 ~~~P~~l~~l~~ 233 (499)
++....+..+.+
T Consensus 198 v~~~~~~~~l~~ 209 (700)
T PTZ00216 198 VCNGKNVPNLLR 209 (700)
T ss_pred EECHHHHHHHHH
Confidence 988776655543
No 228
>PRK05934 type III secretion system protein; Validated
Probab=38.49 E-value=1.7e+02 Score=27.36 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=47.5
Q ss_pred HHHHHHHhhcCccceeeeEEEeC-CCCCCceEEEEEEEe--cCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcCC
Q 010854 397 VEIERVCDQADESILETAAISVS-PAGGGPEVLVIFVVL--KKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 471 (499)
Q Consensus 397 ~~iE~~l~~~~~~v~~~~v~~~~-~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~~ 471 (499)
.|+++.|. ..++|..+.|-..- .+...+..+.|-|++ .++...+.+++. .|...+...++. ..|..|.++|.
T Consensus 74 GELaRTIe-sld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~-gIvnLVAsSVpG-LtpEnVTVVDq 148 (341)
T PRK05934 74 EQLEKDLT-MFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLH-SITDYLTSSVPG-LTKEHITLSDN 148 (341)
T ss_pred HHHHHHHH-cccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHH-HHHHHHHhcCCC-CCccCeEEECC
Confidence 47888885 89999999885553 333222345555555 555566655544 466667777765 77888999985
No 229
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=38.21 E-value=1.1e+02 Score=29.55 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=43.9
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC-----CC---HHHHHHHhhcCCeeEEEecc
Q 010854 1 MFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FA---AREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 1 ~v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~---~~~l~~~l~~~~~~~ii~~~ 60 (499)
|++++++|++.+.-++|+.++..-+.+.|.-++.+.-. .+ .+..+.+.+..+.+..+.+-
T Consensus 1 ~~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 78999999999999999999999888888654443221 12 23346777777877776643
No 230
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=37.97 E-value=1.2e+02 Score=31.21 Aligned_cols=97 Identities=16% Similarity=-0.005 Sum_probs=67.0
Q ss_pred CCeEEEEecCCCCCCCceEEecchhhHHHhhhcce----eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 128 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 128 ~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.| ++|-+-.++. -.+|.+.+......+.. ..+. .+|+++.++|..... .+.++++...|+....+-+.
T Consensus 25 ~~~a-ii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTA-IIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceE-EEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccC
Confidence 4444 4454433333 45666665544433333 2456 999999999987643 23478888999998888778
Q ss_pred CChhHHHHHHHHhCCeEEecchHHHHH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
+.++.+..-+..-.+.++++....++.
T Consensus 99 f~~~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 99 LSAEAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred CCHHHHHHHHHccCCCEEEEecccccc
Confidence 889999999999999998876666553
No 231
>PRK06188 acyl-CoA synthetase; Validated
Probab=37.69 E-value=1.1e+02 Score=31.39 Aligned_cols=79 Identities=14% Similarity=0.003 Sum_probs=59.4
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..... ..++.+++++...++-... .+..+++.+..|+..+.+.+....+.+...++..+++.+..
T Consensus 37 ~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~ 115 (524)
T PRK06188 37 RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPE-VLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIV 115 (524)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEE
Confidence 4677766554444333 4578899998877665442 33448889999999999987778888999999999999988
Q ss_pred chH
Q 010854 224 VPS 226 (499)
Q Consensus 224 ~P~ 226 (499)
.+.
T Consensus 116 ~~~ 118 (524)
T PRK06188 116 DPA 118 (524)
T ss_pred ecc
Confidence 876
No 232
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=37.21 E-value=87 Score=32.23 Aligned_cols=85 Identities=13% Similarity=-0.012 Sum_probs=62.1
Q ss_pred EEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEe
Q 010854 146 IPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 222 (499)
Q Consensus 146 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~ 222 (499)
..+|...+......+.. ..+++++|++...++-...+ ...+++.+..|+..+.+++....+.+...++..++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 34677776555444443 45789999988776665432 234778888999999988777889999999999999998
Q ss_pred cchHHHHHH
Q 010854 223 TVPSLVKAW 231 (499)
Q Consensus 223 ~~P~~l~~l 231 (499)
....+...+
T Consensus 117 ~~~~~~~~~ 125 (542)
T PRK06018 117 TDLTFVPIL 125 (542)
T ss_pred EccccHHHH
Confidence 876554433
No 233
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=37.11 E-value=97 Score=24.09 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=34.3
Q ss_pred ccccchhhhhhhhhcc-CcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 178 LGWVMGPVILFSSFLN-GATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 178 ~~~~~~~~~~~~~l~~-G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
..|..|+..+...+-. |..+.+.+.....+.+.+.+++.+++.+..
T Consensus 11 ~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~i 57 (121)
T PF02310_consen 11 EVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGI 57 (121)
T ss_dssp SSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEE
T ss_pred cchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 3466677766666655 888988876666789999999999998755
No 234
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=35.11 E-value=1e+02 Score=31.70 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=57.6
Q ss_pred EecchhhHHHhhhc---ceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+......+ ....++.+++++...++-... ..+..++.+..|+.++.+.+....+.+...++..++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD-HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 46776665444333 344578999999887775432 33347888899999998887777889999999999999886
Q ss_pred ch
Q 010854 224 VP 225 (499)
Q Consensus 224 ~P 225 (499)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 54
No 235
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.16 E-value=2.9e+02 Score=29.08 Aligned_cols=101 Identities=12% Similarity=0.013 Sum_probs=62.9
Q ss_pred CCCeEEEEec--CCCCCCCceEEecchhhHHHhhhcceec--cCcCCcEEEeecCccccchhhhhhhhhccCcEEEec-C
Q 010854 127 VDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY-Q 201 (499)
Q Consensus 127 ~~~~a~i~~T--SGtTG~pk~v~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~ 201 (499)
++.++++... .+..|. ...+|+..+...+..+...+ .++++|++...++-+.. .++.+++++..|+.++-+ +
T Consensus 35 ~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 35 GDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLD-YLIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred CCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChH-HHHHHHHHHHcCCEEEeeCC
Confidence 4566655432 112222 34568777666554444332 26889998887766542 333478888999987755 3
Q ss_pred CCCC--hhHHHHHHHHhCCeEEecchHHHHH
Q 010854 202 GSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 230 (499)
Q Consensus 202 ~~~~--~~~~~~~i~~~~~t~l~~~P~~l~~ 230 (499)
+... .+.+...++..++..++........
T Consensus 112 ~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 142 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCTPSAILTTTDSAEG 142 (631)
T ss_pred CCccchHHHHHHHHHhCCCCEEEEChHHHHH
Confidence 2221 4568888999999999988766543
No 236
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=33.64 E-value=99 Score=31.33 Aligned_cols=80 Identities=14% Similarity=-0.019 Sum_probs=59.5
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+.. ..++..++++....+.+..+ ++..++++..|+.++.++.....+.+...+++.++..++.
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHM-LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 5777777655544443 34678888887766665332 3458899999999998887777888999999999999988
Q ss_pred chHH
Q 010854 224 VPSL 227 (499)
Q Consensus 224 ~P~~ 227 (499)
....
T Consensus 104 ~~~~ 107 (502)
T TIGR01734 104 TAEL 107 (502)
T ss_pred cccc
Confidence 7643
No 237
>PRK05852 acyl-CoA synthetase; Validated
Probab=33.56 E-value=1.1e+02 Score=31.43 Aligned_cols=90 Identities=13% Similarity=-0.048 Sum_probs=63.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC
Q 010854 126 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 202 (499)
Q Consensus 126 ~~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 202 (499)
.++.+|++.... ...+|...+......+. ...++.++|++...++-+. ..+...++.+..|+..+.+++
T Consensus 29 ~p~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 100 (534)
T PRK05852 29 LPEAPALVVTAD-------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDP 100 (534)
T ss_pred CCCCcEEEecCC-------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCC
Confidence 356666554211 12467666655444333 3457899999887765543 344458899999999999988
Q ss_pred CCChhHHHHHHHHhCCeEEec
Q 010854 203 SPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 203 ~~~~~~~~~~i~~~~~t~l~~ 223 (499)
....+.+...++..++..++.
T Consensus 101 ~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 101 ALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCcHHHHHHHHhCCCCEEEE
Confidence 888888999999999999874
No 238
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.52 E-value=1e+02 Score=31.98 Aligned_cols=82 Identities=12% Similarity=0.007 Sum_probs=60.9
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+..+.. ..+++.+|++...++-+..+ +...++.+..|+..+.+.+....+.+...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 4677776555544443 34788899998877765442 3448889999999998887777889999999999999988
Q ss_pred chHHHH
Q 010854 224 VPSLVK 229 (499)
Q Consensus 224 ~P~~l~ 229 (499)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 775443
No 239
>PRK06060 acyl-CoA synthetase; Validated
Probab=33.38 E-value=1.2e+02 Score=32.48 Aligned_cols=81 Identities=12% Similarity=-0.068 Sum_probs=59.4
Q ss_pred ecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecc
Q 010854 148 WTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 224 (499)
Q Consensus 148 ~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 224 (499)
+|+..+...+..+. ...++.+++++...++-+.. .++.+++.+..|+..+.+++....+.+...++..++..++..
T Consensus 31 ~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~ 109 (705)
T PRK06060 31 VTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPD-LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTS 109 (705)
T ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEc
Confidence 67777655544433 34578999999887776543 233488889999999988877777888888999999988876
Q ss_pred hHHHH
Q 010854 225 PSLVK 229 (499)
Q Consensus 225 P~~l~ 229 (499)
..+..
T Consensus 110 ~~~~~ 114 (705)
T PRK06060 110 DALRD 114 (705)
T ss_pred hHHhh
Confidence 55443
No 240
>PRK07787 acyl-CoA synthetase; Validated
Probab=32.89 E-value=1.2e+02 Score=30.57 Aligned_cols=76 Identities=4% Similarity=-0.057 Sum_probs=57.1
Q ss_pred EecchhhHHHhhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecch
Q 010854 147 PWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
.+|...+...+..+...+ .+++++...++-.- ..++.+++.+..|+..+.+++....+.+...+++.+++.++..+
T Consensus 25 ~~Ty~el~~~~~~~a~~L--~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~ 100 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV--AGARRVAVLATPTL-ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPA 100 (471)
T ss_pred EEEHHHHHHHHHHHHHHh--ccCCEEEEECCCCH-HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecC
Confidence 467777777666665543 46788776655542 23344889999999999998877888999999999999998865
No 241
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=32.12 E-value=1.1e+02 Score=32.32 Aligned_cols=94 Identities=9% Similarity=-0.072 Sum_probs=64.0
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
++.++++.. +..| ....+|...+...+..+.. ..+++++|++...++-+.. .++..++++..|+.++.+++.
T Consensus 53 p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~ 127 (614)
T PRK08180 53 PDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIE-HALLALAAMYAGVPYAPVSPA 127 (614)
T ss_pred CCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeeccc
Confidence 456665542 1112 1345788777665555444 4578999999887766543 234488899999999988765
Q ss_pred CC-----hhHHHHHHHHhCCeEEecch
Q 010854 204 PL-----ERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 204 ~~-----~~~~~~~i~~~~~t~l~~~P 225 (499)
.. .+.+...++..++..++...
T Consensus 128 ~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 128 YSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred cccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 54 57788889999998888754
No 242
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=31.85 E-value=1.2e+02 Score=30.92 Aligned_cols=86 Identities=8% Similarity=-0.008 Sum_probs=62.0
Q ss_pred eeccCcCCcE-EEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchHHHHHHHccCCCCcc
Q 010854 162 AHIDLKVGDV-YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL 240 (499)
Q Consensus 162 ~~~~~~~~~~-~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 240 (499)
..+++++++. +..+.+- ..-++...++++..+.+++.+-...-.+.+...+.+.+++.+++.+.++..|.... .
T Consensus 107 ~~lG~k~~e~k~~iFa~T-raeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l----~ 181 (678)
T KOG1180|consen 107 VKLGLKPKETKIAIFAET-RAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPL----K 181 (678)
T ss_pred HHhCCCCCCCeEEEEecc-hHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHH----h
Confidence 3567887666 5444433 33355668889999999998755555578999999999999999999999776552 2
Q ss_pred cccceeEEEeec
Q 010854 241 DWTKIRSFASTG 252 (499)
Q Consensus 241 ~l~~l~~i~~~G 252 (499)
..++++.|+.--
T Consensus 182 ~~~~vk~II~~d 193 (678)
T KOG1180|consen 182 QAKTVKHIIYFD 193 (678)
T ss_pred ccCceeEEEEec
Confidence 245777776655
No 243
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=31.51 E-value=1.2e+02 Score=30.12 Aligned_cols=60 Identities=15% Similarity=0.027 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCCcH--HHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccc
Q 010854 2 FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFI 62 (499)
Q Consensus 2 v~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 62 (499)
+++||++....+.+. ......++.++.|+..++++... .+.+...+++.++.+++..+..
T Consensus 116 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~~Ps~ 177 (422)
T TIGR02155 116 GRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMVTPSY 177 (422)
T ss_pred CCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEEcHHH
Confidence 578999887665442 22334577889999999887654 5788899999999999987753
No 244
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=30.78 E-value=2.7e+02 Score=22.52 Aligned_cols=78 Identities=14% Similarity=0.007 Sum_probs=47.6
Q ss_pred ccchhhh-hhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH------HHHHHHccCCCCcccccceeEEEeec
Q 010854 180 WVMGPVI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS------LVKAWRNTNCLEGLDWTKIRSFASTG 252 (499)
Q Consensus 180 ~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~------~l~~l~~~~~~~~~~l~~l~~i~~~G 252 (499)
|..|... ....-..|..++.+....+++.+++...++++..+..+.- .+..+.+...+.+ +... .+++||
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g--l~~~-~vivGG 90 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG--LEGI-LLYVGG 90 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC--CCCC-EEEecC
Confidence 6666543 2333457889999887788999999999999988654331 2344433333223 2333 366777
Q ss_pred CC-CChhhH
Q 010854 253 ET-SNVDDD 260 (499)
Q Consensus 253 ~~-l~~~~~ 260 (499)
.. ++++..
T Consensus 91 ~~vi~~~d~ 99 (134)
T TIGR01501 91 NLVVGKQDF 99 (134)
T ss_pred CcCcChhhh
Confidence 64 444443
No 245
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=29.95 E-value=2.3e+02 Score=27.02 Aligned_cols=61 Identities=18% Similarity=0.154 Sum_probs=48.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecccc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFI 62 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 62 (499)
+.||..+.|=-..+=--+-.-+.|..-|.-++.+=|..-+.|-..+|+..++.++.++.+.
T Consensus 100 i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~ 160 (362)
T KOG1252|consen 100 ITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPAA 160 (362)
T ss_pred ccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChHH
Confidence 6777777666655555566667777788888887787777888999999999999999864
No 246
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=29.81 E-value=1.2e+02 Score=30.61 Aligned_cols=79 Identities=6% Similarity=-0.120 Sum_probs=58.3
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+. ...++.+++++....+-... .+..+++.+..|+..+.++.....+.+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 467777765554443 34567889998887764433 34458899999999998887777788889999999999887
Q ss_pred chH
Q 010854 224 VPS 226 (499)
Q Consensus 224 ~P~ 226 (499)
...
T Consensus 106 ~~~ 108 (503)
T PRK04813 106 TEE 108 (503)
T ss_pred ccc
Confidence 643
No 247
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=29.16 E-value=2.1e+02 Score=28.56 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=16.2
Q ss_pred HHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEe
Q 010854 26 ILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 58 (499)
Q Consensus 26 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 58 (499)
.+.|+.+..++....++.++..++. +.++|+.
T Consensus 122 ~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 122 RKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred HHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 4555555555554455555555543 3444443
No 248
>PRK09192 acyl-CoA synthetase; Validated
Probab=28.66 E-value=2e+02 Score=29.91 Aligned_cols=87 Identities=11% Similarity=-0.061 Sum_probs=60.6
Q ss_pred eEEecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCC-------hhHHHHHHH
Q 010854 145 AIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQ 214 (499)
Q Consensus 145 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-------~~~~~~~i~ 214 (499)
.-.+|...+...+..+.. ..+++++|++...++-+.. ..+.+++++..|+..+.++.... .+.+...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD-FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh-HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 355777776554444433 4578999999887776432 33448889999999998853221 467888999
Q ss_pred HhCCeEEecchHHHHHHH
Q 010854 215 DAGVTVLGTVPSLVKAWR 232 (499)
Q Consensus 215 ~~~~t~l~~~P~~l~~l~ 232 (499)
..++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999988876654443
No 249
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=28.48 E-value=1.2e+02 Score=30.54 Aligned_cols=60 Identities=17% Similarity=0.304 Sum_probs=42.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCC-CCCHHHHHHHhhcCCeeEEEecccc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD-SFAAREIATRLRVSKAKGIFTQDFI 62 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ii~~~~~ 62 (499)
+.|||+|++=-| +...+...|-..-+..+.||++. ...++.+...++..++|.+++.+.+
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 578999988654 33444444444444455555543 5689999999999999999998864
No 250
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=28.40 E-value=1.6e+02 Score=29.42 Aligned_cols=79 Identities=6% Similarity=-0.105 Sum_probs=58.7
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+......+.. ..++.+++++....+-... .+..+++.+..|+..+.+.+....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPE-TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 4677776655544443 3578899998877665542 34448889999999999987778888889999999988876
Q ss_pred chH
Q 010854 224 VPS 226 (499)
Q Consensus 224 ~P~ 226 (499)
...
T Consensus 107 ~~~ 109 (458)
T PRK09029 107 LEG 109 (458)
T ss_pred cCc
Confidence 543
No 251
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=28.20 E-value=3.8e+02 Score=23.29 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=43.0
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCCC----CceEEEEEEE--ecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEE
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAGG----GPEVLVIFVV--LKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKV 468 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~----~~~~~~~~v~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~ 468 (499)
--.|+++.|. ..++|.++-|...-++.. ....+.|-|+ ++++... ....+.|+..+...++. ..|..|-+
T Consensus 108 le~EL~rtI~-~i~~V~~ArVhl~~P~~~~f~~~~~~~sASV~l~~~~g~~l--~~qv~~I~~LVa~SV~~-L~~enVtV 183 (193)
T TIGR02544 108 IEQRLEQTLS-QIDGVISARVHVVLPENDNNGRPKKPSSASVFIKYRPGLNL--DALIPKIKRLVANSIPG-LDYDNVSV 183 (193)
T ss_pred HHHHHHHHHH-hcCCeeeeEEEEECCCCCcccccCCCCcEEEEEEeCCCCCc--HHHHHHHHHHHHHhcCC-CCccceEE
Confidence 3468999996 899999998866544321 1123444444 4444332 23556677777777765 55655555
Q ss_pred cC
Q 010854 469 VP 470 (499)
Q Consensus 469 ~~ 470 (499)
++
T Consensus 184 v~ 185 (193)
T TIGR02544 184 VL 185 (193)
T ss_pred EE
Confidence 53
No 252
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=26.06 E-value=2.5e+02 Score=27.24 Aligned_cols=60 Identities=10% Similarity=0.144 Sum_probs=43.4
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCC---CHHHHHHHhhcCCeeEEEecc
Q 010854 1 MFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF---AAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 1 ~v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~ii~~~ 60 (499)
|.+++++|++.+.-++|+.++.+-+...|.-++.+.... ..+..+.+.+..++...+.+-
T Consensus 1 ~~~~~~kVlVa~SGGvDSsv~a~lL~~~G~eV~av~~~~~~~e~~~a~~va~~LGI~~~vvd~ 63 (362)
T PRK14664 1 MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEPQDARELAARMGIEHYVADE 63 (362)
T ss_pred CCCCCCEEEEEEeCCHHHHHHHHHHHHcCCcEEEEEecCcchhHHHHHHHHHHhCCCEEEEeC
Confidence 678899999999999999998887778776444443322 234566777777777766653
No 253
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.95 E-value=3.1e+02 Score=21.20 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=33.1
Q ss_pred HHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEeccc
Q 010854 23 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 61 (499)
Q Consensus 23 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 61 (499)
..+-..|.-++-+.+..+++++...+.+.+++++..+..
T Consensus 21 ~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 21 RALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 334458888889999999999999999999999988765
No 254
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=25.70 E-value=2.9e+02 Score=29.09 Aligned_cols=97 Identities=16% Similarity=0.047 Sum_probs=66.8
Q ss_pred CCCeEEEEecCCCCCCCceEEecchhhHHH---hhhcceeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCC
Q 010854 127 VDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 203 (499)
Q Consensus 127 ~~~~a~i~~TSGtTG~pk~v~~s~~~~~~~---~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 203 (499)
.+.++.+.-.-++.+.+. ++...+... ++......+++.+|++...+|+.-..- +..+.....|+........
T Consensus 79 ~~~~a~~~~~~~~~~~~~---~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~-ia~lA~~r~Gai~~~v~~~ 154 (626)
T KOG1175|consen 79 GDKVAIIFEGNEGGDTEV---WTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAV-IAMLACARIGAIHSSVFAG 154 (626)
T ss_pred CCCcEEEEEecCCCceEE---EEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHH-HHHHHHhhcCeEEEEeecc
Confidence 466666665455554443 555544433 333333678999999999999875433 3366777788888888778
Q ss_pred CChhHHHHHHHHhCCeEEecchHH
Q 010854 204 PLERSFGKFVQDAGVTVLGTVPSL 227 (499)
Q Consensus 204 ~~~~~~~~~i~~~~~t~l~~~P~~ 227 (499)
+.+..+...++..++..++..-..
T Consensus 155 fs~~~l~~Rl~~~~~k~i~t~d~~ 178 (626)
T KOG1175|consen 155 FSAKELLDRLQDSKAKVIITQDVV 178 (626)
T ss_pred CCHHHHHHHHHhcCCCEEEEEeee
Confidence 889999999999888887665444
No 255
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=25.58 E-value=1.5e+02 Score=31.90 Aligned_cols=82 Identities=10% Similarity=0.003 Sum_probs=59.0
Q ss_pred EecchhhHHHhhhcceec--cCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecc
Q 010854 147 PWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 224 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 224 (499)
.+|...+...+..+...+ ...++|++...++-+.. .....++++..|+..+.+.....++.+...++..++..++..
T Consensus 231 ~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~ 309 (718)
T PRK08043 231 PDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATI-SAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTS 309 (718)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHH-HHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEc
Confidence 367776665544444322 14789999887776643 333478888899988888777777899999999999999887
Q ss_pred hHHHH
Q 010854 225 PSLVK 229 (499)
Q Consensus 225 P~~l~ 229 (499)
...++
T Consensus 310 ~~~~~ 314 (718)
T PRK08043 310 RQFLD 314 (718)
T ss_pred HHHHh
Confidence 76544
No 256
>PRK08308 acyl-CoA synthetase; Validated
Probab=25.53 E-value=2e+02 Score=28.26 Aligned_cols=77 Identities=9% Similarity=-0.051 Sum_probs=52.9
Q ss_pred ecchhhHHHhhhcce--eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecch
Q 010854 148 WTQLSSIRCTAEGWA--HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 148 ~s~~~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
+|...+......... ..+.++++++...++-... ....+++.+..|+..+.+++....+.+...+++.++..++...
T Consensus 9 ~ty~el~~~~~~~a~~l~~~~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (414)
T PRK08308 9 YSKSDFDLRLQRYEEMEQFQEAAGNRFAVCLKDPFD-IITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGE 87 (414)
T ss_pred ecHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecC
Confidence 555555443332222 2467888988776655432 2334778888999999988777778888889999998888654
No 257
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=25.39 E-value=2.4e+02 Score=30.24 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCC---------C-----HHHHHHHhhcC-Cee----EEEecccc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF---------A-----AREIATRLRVS-KAK----GIFTQDFI 62 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~~ 62 (499)
+++||.|.+ -.|+=-.+.. |+...|+.++-|.|.. + ++.++..++.. +++ ++|+.+.+
T Consensus 232 ~~~Gd~VLv-dRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVLI-DRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEEe-ecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 689998875 4455555444 9999999999988753 3 68888888765 334 77888876
Q ss_pred ccc
Q 010854 63 LRG 65 (499)
Q Consensus 63 ~~~ 65 (499)
...
T Consensus 309 dG~ 311 (714)
T PRK15400 309 DGL 311 (714)
T ss_pred ccE
Confidence 543
No 258
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=25.04 E-value=1.8e+02 Score=29.13 Aligned_cols=74 Identities=3% Similarity=-0.064 Sum_probs=51.7
Q ss_pred hhhHHHhhhcce---eccC-cCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEecch
Q 010854 151 LSSIRCTAEGWA---HIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 225 (499)
Q Consensus 151 ~~~~~~~~~~~~---~~~~-~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P 225 (499)
+.+...+..... ..+. ..+++++..++-+ .-.+..+++.+..|+.++.+++....+.+...+++.+++.++...
T Consensus 23 ~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~-~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (452)
T PRK07445 23 QRFYQLAQQLYLQLQQLATPRTPPKILLAESDP-LQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLD 100 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCC-HHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecC
Confidence 445444444433 3345 4688887665543 223344888889999999998888888999999999999988644
No 259
>PLN02565 cysteine synthase
Probab=24.74 E-value=2.8e+02 Score=26.40 Aligned_cols=59 Identities=14% Similarity=0.132 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
+.+|....+....+=.-+..-+++..+|.-++.+-|...+......++..+++++++++
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 35664433333344444444557777999888888888888899999999999999876
No 260
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=24.37 E-value=2e+02 Score=22.40 Aligned_cols=48 Identities=10% Similarity=0.067 Sum_probs=35.9
Q ss_pred cccchhhhhhhhh-ccCcEEEecCCCCChhHHHHHHHHhCCeEEecchH
Q 010854 179 GWVMGPVILFSSF-LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 226 (499)
Q Consensus 179 ~~~~~~~~~~~~l-~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 226 (499)
.|..|+..+...+ ..|..++.+....+++.+.+.+.+.+++++...-+
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3777776533333 58888888877778899999999999998765543
No 261
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=24.29 E-value=1.9e+02 Score=29.64 Aligned_cols=79 Identities=10% Similarity=-0.013 Sum_probs=56.5
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+. ...++++++++...++-... ....+++.+..|+..+.+......+.+...+++.++..+..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~ 126 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAE-FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYII 126 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEE
Confidence 577777655544443 34578899998877654432 22348888899998887766667788999999999999887
Q ss_pred chH
Q 010854 224 VPS 226 (499)
Q Consensus 224 ~P~ 226 (499)
.+.
T Consensus 127 ~~~ 129 (527)
T TIGR02275 127 DRA 129 (527)
T ss_pred cCc
Confidence 643
No 262
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=24.26 E-value=3.2e+02 Score=25.45 Aligned_cols=55 Identities=22% Similarity=0.248 Sum_probs=35.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCC----------CCCHHHHHHHhhc-CCeeEEEec
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD----------SFAAREIATRLRV-SKAKGIFTQ 59 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 59 (499)
+++||.|.+.-+..... +-++...|+.++.+.+ ..+++.+...++. .+++.++..
T Consensus 96 ~~~gd~Vlv~~~~h~s~---~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKSV---INGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHHH---HHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 57899888876544333 3445567877766644 3467888888865 456665543
No 263
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=24.26 E-value=2.1e+02 Score=27.88 Aligned_cols=54 Identities=19% Similarity=0.217 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC-----CCHHHHHHHhhcCCeeEEEec
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 59 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 59 (499)
++|||-|.+ .+.-|+.+.=+++..|+.+|-++-. .+++.++..+... .|+||.-
T Consensus 71 ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 71 IGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred CCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 689996654 5677899999999999999988753 5788999988876 6666653
No 264
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=23.98 E-value=1.7e+02 Score=28.63 Aligned_cols=53 Identities=19% Similarity=0.215 Sum_probs=32.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC-----CCHHHHHHHhhcCCeeEEEe
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFT 58 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 58 (499)
++|||.|.+-.+. |.....++...|+.++.++.. ...+.+...+.. +.++++.
T Consensus 68 ~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 68 IQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred CCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 5788888775544 334445556778777766532 355667766653 5566553
No 265
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=23.77 E-value=2.7e+02 Score=24.51 Aligned_cols=73 Identities=21% Similarity=0.132 Sum_probs=40.9
Q ss_pred chHHHHHHHhhcCccceeeeEEEeCCCC--C--CceEEEEEEE--ecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEE
Q 010854 395 SSVEIERVCDQADESILETAAISVSPAG--G--GPEVLVIFVV--LKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKV 468 (499)
Q Consensus 395 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~--~--~~~~~~~~v~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~ 468 (499)
--.++|+.|. ..++|..+.|...-++. . ....+.|-|+ +.++...+ +..+.|+..+...++. ..|..|.+
T Consensus 116 le~eL~~tI~-~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~--~qv~~I~~LVa~sV~g-L~~enVtV 191 (206)
T PF01514_consen 116 LEGELERTIE-SIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS--EQVQGIQNLVASSVPG-LKPENVTV 191 (206)
T ss_dssp HHHHHHHHHT-TSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G--GGHHHHHHHHHHHSTT---GGGEEE
T ss_pred HHHHHHHHHH-cCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH--HHHHHHHHHHHHhcCC-CCcccEEE
Confidence 3468999996 89999999887665432 1 1123454444 44555444 4455577767776764 66666766
Q ss_pred cCC
Q 010854 469 VPE 471 (499)
Q Consensus 469 ~~~ 471 (499)
++.
T Consensus 192 vD~ 194 (206)
T PF01514_consen 192 VDQ 194 (206)
T ss_dssp EEE
T ss_pred EeC
Confidence 653
No 266
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=23.68 E-value=3.1e+02 Score=25.77 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=41.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
++||+.|.=-..-+.-.-++ +.|...|.-++.+=|...+.+.+.+|+..++.+++++.
T Consensus 59 l~pG~tIVE~TSGNTGI~LA-~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALA-MVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChHHHHHH-HHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 78888554444333444444 45556677777777777778889999999999999987
No 267
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=23.48 E-value=2.8e+02 Score=27.42 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEc--CCCCCHHHHHHHhhcCCeeEEEecc
Q 010854 4 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI--ADSFAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 4 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
+|-+|+.++.=.++..+.+..+..+|+-+.-. ||..+.++....|...++.+.-...
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~ 89 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRG 89 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecC
Confidence 48899999999999999999999999976544 7888899999999999999765443
No 268
>PRK07868 acyl-CoA synthetase; Validated
Probab=23.39 E-value=3.7e+02 Score=30.37 Aligned_cols=81 Identities=19% Similarity=0.035 Sum_probs=58.9
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+.. ..++.++|++...++-... .++.+++++..|+..+.+++. ..+...++..+++.++.
T Consensus 472 ~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e-~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~ 547 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPS-ALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIIT 547 (994)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEE
Confidence 4688777665554443 4588999999877765542 233488899999999988753 46777888889999998
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.+..+..+
T Consensus 548 ~~~~~~~~ 555 (994)
T PRK07868 548 DPTNLEAA 555 (994)
T ss_pred ChHHHHHH
Confidence 87776654
No 269
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=23.28 E-value=2.9e+02 Score=27.01 Aligned_cols=13 Identities=15% Similarity=0.279 Sum_probs=6.0
Q ss_pred CHHHHHHHHHHHH
Q 010854 441 QPDKLKMIFSKAI 453 (499)
Q Consensus 441 ~~~~l~~~~~~~~ 453 (499)
+.++|++.+.+++
T Consensus 367 ~~~dl~~dl~~al 379 (382)
T TIGR02080 367 DADDLIADLEQGL 379 (382)
T ss_pred CHHHHHHHHHHHH
Confidence 3445555544433
No 270
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=23.24 E-value=5.4e+02 Score=23.49 Aligned_cols=73 Identities=11% Similarity=0.163 Sum_probs=43.8
Q ss_pred hHHHHHHHhhcCccceeeeEEEeCCC-CC--CceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCceeeeEEEEcC
Q 010854 396 SVEIERVCDQADESILETAAISVSPA-GG--GPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 470 (499)
Q Consensus 396 ~~~iE~~l~~~~~~v~~~~v~~~~~~-~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~~~ 470 (499)
-.|+|+.|. ..++|.++-|..+-++ .. .+..+.|-|+.......+.+.....++..+...++. ..|..|-+++
T Consensus 109 egELarTI~-~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~~~~~~~~v~I~~LVA~SV~g-L~~enVTVvd 184 (249)
T PRK15348 109 EQRIEGMLS-QMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPG-LQYSKISILM 184 (249)
T ss_pred HHHHHHHHH-hCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCCCChHHHHHHHHHHHHHhcCC-CCccceEEEe
Confidence 478999996 9999999988665332 11 123345555544433334443332577777777765 6666666554
No 271
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=23.00 E-value=2.2e+02 Score=28.59 Aligned_cols=57 Identities=19% Similarity=0.252 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCCcHH--HHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEeccc
Q 010854 2 FSKGDAIAIDMPMTVR--AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 61 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 61 (499)
+++||++.++.+-+.. .....+|+.++|+..+|... .+....++++.++.+++..+.
T Consensus 127 ~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~~ps 185 (445)
T TIGR03335 127 FTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVASVF 185 (445)
T ss_pred CCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEECHH
Confidence 5789999998876643 23445788899998887643 234567888999998877554
No 272
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=22.90 E-value=1.4e+02 Score=30.09 Aligned_cols=59 Identities=10% Similarity=-0.084 Sum_probs=42.1
Q ss_pred CcCCcEEEeecCccccchhhhhhhhhccCcEEEecCC---CCChhHHHHHHHHhCCeEEecchHHH
Q 010854 166 LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLV 228 (499)
Q Consensus 166 ~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~l 228 (499)
.++||.++.--|-++..--+. -..|..++-++- ..+++.+.+.++++++..++++|++-
T Consensus 176 ~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 568999988777776433322 235777776653 33678888899999999999999763
No 273
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=22.90 E-value=3.1e+02 Score=26.85 Aligned_cols=10 Identities=20% Similarity=0.325 Sum_probs=4.4
Q ss_pred CCCCEEEEEc
Q 010854 3 SKGDAIAIDM 12 (499)
Q Consensus 3 ~~gd~V~i~~ 12 (499)
++||+|.+..
T Consensus 89 ~~GD~Vl~~~ 98 (386)
T PRK08045 89 KPGDLLVAPH 98 (386)
T ss_pred CCCCEEEEcC
Confidence 4444444443
No 274
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=22.47 E-value=1.8e+02 Score=33.89 Aligned_cols=84 Identities=12% Similarity=0.027 Sum_probs=63.2
Q ss_pred EecchhhHHHhhhcce---eccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|+..+...+..+.. ..++++++++...++-+.. ..+.+++.+..|+..+.+++....+.+...++..++..++.
T Consensus 483 ~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~-~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~ 561 (1296)
T PRK10252 483 QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVF-LTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLIT 561 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEE
Confidence 3677766555444433 4578899999888776544 23458899999999999987777788999999999999988
Q ss_pred chHHHHHH
Q 010854 224 VPSLVKAW 231 (499)
Q Consensus 224 ~P~~l~~l 231 (499)
.......+
T Consensus 562 ~~~~~~~~ 569 (1296)
T PRK10252 562 TADQLPRF 569 (1296)
T ss_pred Ccchhhhc
Confidence 87665544
No 275
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=22.11 E-value=2.7e+02 Score=20.34 Aligned_cols=20 Identities=20% Similarity=0.032 Sum_probs=16.2
Q ss_pred cccccCCCceEEEECCCCCC
Q 010854 298 AFSTATMTAGLVILDECGVP 317 (499)
Q Consensus 298 ~~g~~~~~~~~~i~d~~g~~ 317 (499)
..|.|+++-.++++|.+|+-
T Consensus 16 ~~G~Pv~gAyVRLLD~sgEF 35 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSSGEF 35 (85)
T ss_pred cCCcCCCCeEEEEEcCCCCe
Confidence 45789999999999987665
No 276
>PRK06145 acyl-CoA synthetase; Validated
Probab=21.85 E-value=2.5e+02 Score=28.39 Aligned_cols=81 Identities=12% Similarity=-0.014 Sum_probs=57.4
Q ss_pred EecchhhHHHhhhcc---eeccCcCCcEEEeecCccccchhhhhhhhhccCcEEEecCCCCChhHHHHHHHHhCCeEEec
Q 010854 147 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 223 (499)
Q Consensus 147 ~~s~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 223 (499)
.+|...+...+.... ...++.+++++...++-.-. .+..+++.+..|+..+.+++....+.+...++..++..+..
T Consensus 27 ~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 105 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAA-FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLV 105 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEE
Confidence 356666655444433 33478889988877655432 34448899999999998887777888888999999988876
Q ss_pred chHHH
Q 010854 224 VPSLV 228 (499)
Q Consensus 224 ~P~~l 228 (499)
.+...
T Consensus 106 ~~~~~ 110 (497)
T PRK06145 106 DEEFD 110 (497)
T ss_pred ccchh
Confidence 65443
No 277
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=21.85 E-value=4.1e+02 Score=24.44 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=43.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCcEEE--EcCCCCCHHHHHHHhhcCCeeEEEec
Q 010854 4 KGDAIAIDMPMTVRAVIIYLAIILAGYVVV--SIADSFAAREIATRLRVSKAKGIFTQ 59 (499)
Q Consensus 4 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~l~~~l~~~~~~~ii~~ 59 (499)
+|-+|+.++.-.++..+.+..+..+|+-+. .-||..+.++....|...++.+.--.
T Consensus 42 ~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~ 99 (268)
T PF05221_consen 42 KGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWK 99 (268)
T ss_dssp TTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-T
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeC
Confidence 488999999999999999999999998654 56788899999999999998776543
No 278
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=21.81 E-value=2.8e+02 Score=27.00 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC-----CCHHHHHHHhhcCCeeEEEe
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFT 58 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 58 (499)
+++||.|.+-.+..+. ...++...|+.++.++.. .+++++...+.. +.++++.
T Consensus 68 ~~~Gd~Viv~~~t~~~---~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 68 IQPGDEVIMPSYTFVS---TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred CCCCCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 4677777765554433 344556667776665432 346667666644 4555553
No 279
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=21.31 E-value=3.4e+02 Score=26.03 Aligned_cols=11 Identities=18% Similarity=0.377 Sum_probs=4.9
Q ss_pred CCCCEEEEEcC
Q 010854 3 SKGDAIAIDMP 13 (499)
Q Consensus 3 ~~gd~V~i~~~ 13 (499)
++||.|++-.|
T Consensus 103 ~~gd~vlv~~P 113 (356)
T PRK04870 103 KPGATVLAPEP 113 (356)
T ss_pred CCCCEEEECCC
Confidence 34444444433
No 280
>PRK11761 cysM cysteine synthase B; Provisional
Probab=21.17 E-value=3.3e+02 Score=25.54 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=42.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
+++|++|.-.. .+=.-...-++|.+.|.-+..+-|...+......++..++++++++.
T Consensus 60 ~~~g~~vv~aS-sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIEAT-SGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEEeC-CChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 35667765544 44444555567778898888777777777888999999999999985
No 281
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=21.06 E-value=1.6e+02 Score=16.05 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=13.7
Q ss_pred eecCceEEEecccCCeee
Q 010854 371 RTVGGYIIVQGRADDTMN 388 (499)
Q Consensus 371 ~~~~G~l~~~gR~~d~i~ 388 (499)
.+++|.+++.++....|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 348899999988776654
No 282
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=20.74 E-value=3.1e+02 Score=26.69 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCCCCHHHHHHHhhcCCeeEEEecc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 60 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 60 (499)
++||....+....+-.-+..-++|...|.-+..+-|...+.+...+++..+++++++++
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 46774434445555556666667788899888887877777888999999999999874
No 283
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.40 E-value=2.1e+02 Score=28.44 Aligned_cols=60 Identities=25% Similarity=0.334 Sum_probs=39.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEEcCCC---------CCH-----HHHHHHhhcCC-ee----EEEecccc
Q 010854 2 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS---------FAA-----REIATRLRVSK-AK----GIFTQDFI 62 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~ii~~~~~ 62 (499)
+++||.|.+-- |+=..++. |+...|+.++-+.|. .++ +.++..++... ++ ++|+++.+
T Consensus 103 ~~~gd~VLv~R-N~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKVLVDR-NCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEEEEET-T--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEEEEcC-CcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 68999976654 44444444 999999999977773 233 88888888653 33 57788876
Q ss_pred cc
Q 010854 63 LR 64 (499)
Q Consensus 63 ~~ 64 (499)
..
T Consensus 180 ~G 181 (417)
T PF01276_consen 180 YG 181 (417)
T ss_dssp TS
T ss_pred Ce
Confidence 53
No 284
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=20.38 E-value=3.1e+02 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=7.8
Q ss_pred HHHHHHhCcEEEEcCCCC
Q 010854 22 YLAIILAGYVVVSIADSF 39 (499)
Q Consensus 22 ~lA~~~~G~~~v~l~~~~ 39 (499)
+.+++..|-.++...+.+
T Consensus 85 l~~ll~~GD~Vlv~~~~y 102 (385)
T PRK08574 85 FFSLLKAGDRVVLPMEAY 102 (385)
T ss_pred HHHHhCCCCEEEEcCCCc
Confidence 334455554444334433
No 285
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.13 E-value=1.7e+02 Score=25.94 Aligned_cols=30 Identities=27% Similarity=0.103 Sum_probs=22.5
Q ss_pred HHHHHhCcEEEEcCCCCCHHHHHHHhhcCC
Q 010854 23 LAIILAGYVVVSIADSFAAREIATRLRVSK 52 (499)
Q Consensus 23 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 52 (499)
=++.++|+.+++|++..+.+.+..+++.+.
T Consensus 31 ~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 367889999999999999999999998764
No 286
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=20.07 E-value=3.3e+02 Score=27.11 Aligned_cols=60 Identities=22% Similarity=0.248 Sum_probs=41.7
Q ss_pred CCCCCEEEEEcCCcHHHH----HHHH--HHHHhCcEE---EEcCCCCCHHHHHHHhhcCCeeEEE-eccc
Q 010854 2 FSKGDAIAIDMPMTVRAV----IIYL--AIILAGYVV---VSIADSFAAREIATRLRVSKAKGIF-TQDF 61 (499)
Q Consensus 2 v~~gd~V~i~~~~~~~~~----~~~l--A~~~~G~~~---v~l~~~~~~~~l~~~l~~~~~~~ii-~~~~ 61 (499)
+++||.|.+..+..+-.- ..++ .+.+.|+.. +..+-..+.+++..+++..+|+.+| ++.+
T Consensus 316 l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHge 385 (422)
T TIGR00649 316 IRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHGE 385 (422)
T ss_pred eCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCCc
Confidence 568999999985554222 2223 366788854 3445567899999999999999887 3443
Done!