BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010855
(499 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1
Length = 274
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 54/309 (17%)
Query: 204 DFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQ 263
DFD T T +D+ +LAE + P++ W V+S KY +EY
Sbjct: 6 DFDETITTYDTIHLLAEAV------NKPEE----------------WSVISDKYWQEYLA 43
Query: 264 CIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIF 323
E++ S + + L Y E+ R+ +S GL+ + Q +
Sbjct: 44 WREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIVQLITL 98
Query: 324 QDGCRRFFQNTIKSTNF-KTDVHVLSYCWCGDLI-RSAFASGDLNA--FRVHSNELVYEE 379
+ G F + KT HVLS W +I ++ DL A VH+N+ ++
Sbjct: 99 RAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHANDFDFDT 158
Query: 380 SIST--GEIVNKLESPL-----EKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD 432
S +T G I+ + S L +K++ F I++ + VYIG SP D CL +
Sbjct: 159 STNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGCLQISP 218
Query: 433 IGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYK-WKRLPG--TLYTVSSW 489
I I++ S+ + F +LVD S + K +PG +YT S W
Sbjct: 219 ISILMRSNQKYYDILSRF-------------EDVQLVDISEFPVQKAVPGKKIIYTCSDW 265
Query: 490 AEIHAFILG 498
I L
Sbjct: 266 CAIQKAFLA 274
>sp|P44659|Y358_HAEIN Uncharacterized protein HI_0358 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0358 PE=3 SV=1
Length = 215
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 20 RKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKC---TDFLLSTASGKVEGEKVLG 76
RK + + Q+++ + REWG +EI T + C T +LL + G
Sbjct: 70 RKTLEILCQEIQLHLNYCREWGIS-EQEIFTTQESAACIAYTRYLLDCG--------MTG 120
Query: 77 KIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQE 136
+ A +A++PC + +A+ I P ++ Y+ WID Y S+ FQ+
Sbjct: 121 SL----------AELYAAVTPCALGYAQVARYITQHY-PRLPNNPYQTWIDTYASEEFQQ 169
Query: 137 SALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+A +T + L L L +L I++++ A ++ + F+
Sbjct: 170 AAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFW 208
>sp|Q4L7X6|TENA_STAHJ Putative thiaminase-2 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=tenA PE=3 SV=1
Length = 229
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 40/193 (20%)
Query: 24 KRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA----SGKVEGEKVLGK-I 78
+ V+Q L+ S ++E+ L +I ++K FL+ G+VE ++L I
Sbjct: 35 QAVRQYLRADASYLKEFT-NLYALLIPKAPSMKDVKFLVEQIEFMLDGEVEAHEILADYI 93
Query: 79 ETPFEKI---KV---------------------AAYTLSAISPCMRLFEVIAKEIQAL-- 112
P+E+I KV AAYT++A++PC ++EV+AK AL
Sbjct: 94 NEPYEEIVKEKVWPPSGDHYIKHMYYHAYAHENAAYTIAAMAPCPYVYEVVAK--MALDD 151
Query: 113 --LNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKL 170
LN D + KW D+Y ++ + + LLD+L+ T +E + IK+ + ++
Sbjct: 152 QNLNRDSVT---SKWFDFYSTE-MRPLIEVFDNLLDELTANCTEQEKKDIKESFLQSTIH 207
Query: 171 HVNFFAAQPVKQQ 183
NFF + +Q
Sbjct: 208 ERNFFNMAYINEQ 220
>sp|Q49Z42|TENA_STAS1 Putative thiaminase-2 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=tenA
PE=3 SV=1
Length = 229
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEI--QALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
AAYT++A++PC +++ IA+E LN D + KW ++Y S E + + L+
Sbjct: 127 AAYTIAAMAPCPYVYQFIAQEALRDKELNKDS---ILAKWFEFY-STEMDELVIVFDNLM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
DKL+ + +E IK+ + ++ NFF
Sbjct: 183 DKLTKHCSEKEKNEIKQCFLQSTVHERNFF 212
>sp|P25616|YCQ5_YEAST UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YCR015C PE=3 SV=2
Length = 317
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 20/251 (7%)
Query: 201 LFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEE 260
+ DFD T T D+ +A+L + + P+ T+M D + + T+
Sbjct: 5 IISDFDETITRVDTICTIAKLPYLLNPRLKPEWGHFTKTYM---DGYHKYKYNGTRSLPL 61
Query: 261 YEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS-- 318
+ +I+S + + L + E N + + + + K ++L+ +K +
Sbjct: 62 LSSGVPTIISQSNFNKLFADEL-KYQNHNRVVELNSVNEITKQQIFKSISLDQMKTFARD 120
Query: 319 ---QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNEL 375
+ + +DG + F + +K NF++D +VLS W + I L + N+L
Sbjct: 121 QNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHEVIGDRRLKNSHIFCNDL 178
Query: 376 --VYEESIST--GEIVNKLESPLEKLQAFNDIL---KDHSNDEQNLTV--YIGGSPGDLL 426
V ++ + GE +L + +K++ +IL N E N YIG S DLL
Sbjct: 179 KKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKEGNSCSYWYIGDSETDLL 238
Query: 427 CLLEADIGIVI 437
+L V+
Sbjct: 239 SILHPSTNGVL 249
>sp|Q08224|THI20_YEAST Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=THI20 PE=1 SV=1
Length = 551
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 92 LSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVL 151
+++++PC+ + +++ + +GS +Y +W + Y S ++E+ + E+LL+ +
Sbjct: 462 VASLTPCLMGYGEALTKMKGKVTAPEGS-VYHEWCETYASSWYREAMDEGEKLLNHILET 520
Query: 152 LTGEELEVIKKLYYKAIKLHVNFFAA 177
E+L+ + +Y + +L NF+ A
Sbjct: 521 YPPEQLDTLVTIYAEVCELETNFWTA 546
>sp|Q8CNK1|TENA_STAES Putative thiaminase-2 OS=Staphylococcus epidermidis (strain ATCC
12228) GN=tenA PE=1 SV=1
Length = 229
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 14 EDKLAIRKLRKRVKQKLKTLDSLVRE----WGFELPEEIITDDAT--VKCTDFLLSTASG 67
+D LA + + V+Q L+ S ++E + +P+ +D V+ +F+L G
Sbjct: 25 QDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLE---G 81
Query: 68 KVEGEKVLGK-IETPFEKI---KV---------------------AAYTLSAISPCMRLF 102
+VE +VL I P+E+I KV AA+T++A++PC ++
Sbjct: 82 EVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVY 141
Query: 103 EVIAKEIQALLNPD-DGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIK 161
VI K +A+ +P + + KW +Y ++ E ++L+D+L+ + E + IK
Sbjct: 142 AVIGK--RAMEDPKLNKESVTSKWFQFYSTE-MDELVDVFDQLMDRLTKHCSETEKKEIK 198
Query: 162 KLYYKAIKLHVNFF 175
+ + ++ +FF
Sbjct: 199 ENFLQSTIHERHFF 212
>sp|Q5HMC7|TENA_STAEQ Putative thiaminase-2 OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=tenA PE=3 SV=1
Length = 229
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 14 EDKLAIRKLRKRVKQKLKTLDSLVRE----WGFELPEEIITDDAT--VKCTDFLLSTASG 67
+D LA + + V+Q L+ S ++E + +P+ +D V+ +F+L G
Sbjct: 25 QDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLE---G 81
Query: 68 KVEGEKVLGK-IETPFEKI---KV---------------------AAYTLSAISPCMRLF 102
+VE +VL I P+E+I KV AA+T++A++PC ++
Sbjct: 82 EVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVY 141
Query: 103 EVIAKEIQALLNPD-DGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIK 161
VI K +A+ +P + + KW +Y ++ E ++L+D+L+ + E + IK
Sbjct: 142 AVIGK--RAMEDPKLNKESVTSKWFQFYSTE-MDELVDVFDQLMDRLTKHCSETEKKEIK 198
Query: 162 KLYYKAIKLHVNFF 175
+ + ++ +FF
Sbjct: 199 ENFLQSTIHERHFF 212
>sp|Q7A0C8|TENA_STAAW Putative thiaminase-2 OS=Staphylococcus aureus (strain MW2) GN=tenA
PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q6G7L6|TENA_STAAS Putative thiaminase-2 OS=Staphylococcus aureus (strain MSSA476)
GN=tenA PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q7A4F3|TENA_STAAN Putative thiaminase-2 OS=Staphylococcus aureus (strain N315)
GN=tenA PE=1 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q99SG3|TENA_STAAM Putative thiaminase-2 OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=tenA PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q5HEA5|TENA_STAAC Putative thiaminase-2 OS=Staphylococcus aureus (strain COL) GN=tenA
PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q2FF32|TENA_STAA3 Putative thiaminase-2 OS=Staphylococcus aureus (strain USA300)
GN=tenA PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q6GEY1|TENA_STAAR Putative thiaminase-2 OS=Staphylococcus aureus (strain MRSA252)
GN=tenA PE=1 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFESLM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q2YUL0|TENA_STAAB Putative thiaminase-2 OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=tenA PE=3 SV=1
Length = 229
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEALM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q2FWG0|TENA_STAA8 Putative thiaminase-2 OS=Staphylococcus aureus (strain NCTC 8325)
GN=tenA PE=3 SV=1
Length = 229
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 88 AAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELL 145
A YT++A++PC ++ +AK Q+ LN + + KW D+Y ++ + E ++
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT---AKWFDFYSTE-MDDIINVFEAIM 182
Query: 146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
+KL+ ++ +ELE +K+++ ++ FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|P25052|TENA_BACSU Thiaminase-2 OS=Bacillus subtilis (strain 168) GN=tenA PE=1 SV=1
Length = 236
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 92 LSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVL 151
L+A+ PC L+ + ++ LL+ D G +Y+KWI Y F++ Q EE +++ L
Sbjct: 129 LAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIGTYGGDWFRQ---QVEEQINRFDEL 182
Query: 152 LTGEELEVIKKL 163
EV K+
Sbjct: 183 AENSTEEVRAKM 194
>sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2138 PE=3 SV=1
Length = 344
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 305 VLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGD 364
+LKGL +E ++ + +G + + ++K +K V + + D ++ +
Sbjct: 183 LLKGLPVEVLERIYSRIKLTEGAKELVR-SLKEAGYKVAVVSGGFSYFTDRLKE-----E 236
Query: 365 LNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGD 424
L NEL E TG I ++ EK + +I + +N+ V +G D
Sbjct: 237 LGLDYAFGNELEIENGRLTGRIKGRIIDASEKARIVEEIARKEGISPENV-VAVGDGAND 295
Query: 425 LLCLLEADIGIVIGSSSSLRRLGD 448
L + A +GI + L+ + D
Sbjct: 296 RLMIERAGLGIAFNAKEVLKDVAD 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,249,371
Number of Sequences: 539616
Number of extensions: 7539225
Number of successful extensions: 22390
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 22371
Number of HSP's gapped (non-prelim): 30
length of query: 499
length of database: 191,569,459
effective HSP length: 122
effective length of query: 377
effective length of database: 125,736,307
effective search space: 47402587739
effective search space used: 47402587739
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)