Query 010856
Match_columns 499
No_of_seqs 732 out of 4304
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:43:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.7E-39 5.9E-44 350.2 25.1 289 4-297 393-752 (768)
2 3v47_A TOLL-like receptor 5B a 100.0 1.5E-37 5.2E-42 315.7 21.4 138 150-287 275-413 (455)
3 2id5_A Lingo-1, leucine rich r 100.0 9.9E-37 3.4E-41 311.6 22.9 281 5-287 32-338 (477)
4 1ogq_A PGIP-2, polygalacturona 100.0 3E-37 1E-41 297.2 17.3 254 32-287 51-309 (313)
5 3rgz_A Protein brassinosteroid 100.0 1.6E-35 5.5E-40 319.3 22.5 251 32-282 395-717 (768)
6 2id5_A Lingo-1, leucine rich r 100.0 1.9E-35 6.5E-40 302.1 21.1 284 1-286 52-360 (477)
7 3t6q_A CD180 antigen; protein- 100.0 7.7E-35 2.6E-39 306.6 23.1 283 1-287 274-565 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 3.1E-34 1.1E-38 302.0 25.3 141 148-288 422-564 (606)
9 3v47_A TOLL-like receptor 5B a 100.0 1E-34 3.5E-39 294.9 19.8 264 1-265 50-414 (455)
10 3o6n_A APL1; leucine-rich repe 100.0 1.9E-34 6.3E-39 286.9 21.1 274 4-285 44-355 (390)
11 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-35 9.2E-40 283.6 14.2 250 5-259 50-304 (313)
12 1ziw_A TOLL-like receptor 3; i 100.0 6.9E-34 2.4E-38 303.4 24.4 289 2-292 326-633 (680)
13 3j0a_A TOLL-like receptor 5; m 100.0 6.5E-34 2.2E-38 309.8 23.0 272 5-287 266-565 (844)
14 3oja_B Anopheles plasmodium-re 100.0 6.1E-34 2.1E-38 298.5 20.8 271 5-285 51-361 (597)
15 4g8a_A TOLL-like receptor 4; l 100.0 3.8E-33 1.3E-37 295.1 26.1 118 170-287 465-585 (635)
16 1xku_A Decorin; proteoglycan, 100.0 7E-33 2.4E-37 269.1 25.5 268 6-285 32-309 (330)
17 2z63_A TOLL-like receptor 4, v 100.0 1.9E-33 6.4E-38 293.9 22.8 142 146-287 392-536 (570)
18 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.7E-33 1.6E-37 290.1 24.4 139 147-285 350-513 (562)
19 2ft3_A Biglycan; proteoglycan, 100.0 8.7E-33 3E-37 268.6 24.0 266 6-284 34-309 (332)
20 2z7x_B TOLL-like receptor 1, v 100.0 5.3E-33 1.8E-37 287.1 23.0 132 147-280 321-455 (520)
21 1xku_A Decorin; proteoglycan, 100.0 3.1E-32 1.1E-36 264.5 25.9 267 5-279 52-329 (330)
22 4eco_A Uncharacterized protein 100.0 8.6E-34 2.9E-38 299.1 16.1 276 1-282 202-526 (636)
23 3t6q_A CD180 antigen; protein- 100.0 2.3E-32 7.7E-37 287.8 25.1 278 1-281 53-412 (606)
24 4eco_A Uncharacterized protein 100.0 6.2E-33 2.1E-37 292.6 19.6 273 3-281 247-548 (636)
25 2ft3_A Biglycan; proteoglycan, 100.0 6.2E-32 2.1E-36 262.6 24.8 267 5-280 54-331 (332)
26 3o6n_A APL1; leucine-rich repe 100.0 1.4E-32 4.7E-37 273.4 20.0 246 29-280 44-306 (390)
27 2z80_A TOLL-like receptor 2, v 100.0 1.3E-32 4.5E-37 269.7 16.4 278 4-286 30-318 (353)
28 2z81_A CD282 antigen, TOLL-lik 100.0 3.4E-32 1.2E-36 283.0 20.4 120 2-123 47-168 (549)
29 3zyi_A Leucine-rich repeat-con 100.0 1.9E-31 6.3E-36 270.4 25.2 249 7-262 56-306 (452)
30 3zyj_A Leucine-rich repeat-con 100.0 2.5E-31 8.7E-36 268.4 25.0 246 8-260 46-293 (440)
31 2z66_A Variable lymphocyte rec 100.0 1.7E-32 5.9E-37 263.5 15.3 250 8-263 10-265 (306)
32 4fmz_A Internalin; leucine ric 100.0 3.3E-31 1.1E-35 259.2 24.6 260 2-281 63-323 (347)
33 3zyj_A Leucine-rich repeat-con 100.0 2.7E-31 9.2E-36 268.3 24.0 251 32-287 44-297 (440)
34 3j0a_A TOLL-like receptor 5; m 100.0 2.1E-31 7E-36 290.2 24.8 274 2-280 45-392 (844)
35 3zyi_A Leucine-rich repeat-con 100.0 2.9E-31 1E-35 268.9 23.9 251 32-287 55-308 (452)
36 1ziw_A TOLL-like receptor 3; i 100.0 6.3E-31 2.2E-35 280.5 27.1 253 5-259 25-309 (680)
37 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-31 7.6E-36 275.0 22.3 269 5-282 21-434 (520)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.6E-31 1.9E-35 274.4 25.2 269 5-282 52-463 (562)
39 4ecn_A Leucine-rich repeat pro 100.0 1.8E-31 6E-36 286.7 21.8 271 3-280 489-787 (876)
40 3vq2_A TLR4, TOLL-like recepto 100.0 3.5E-31 1.2E-35 278.7 23.7 119 1-121 52-171 (606)
41 4ecn_A Leucine-rich repeat pro 100.0 8.1E-32 2.8E-36 289.3 18.6 275 1-282 444-766 (876)
42 3oja_B Anopheles plasmodium-re 100.0 5.4E-31 1.8E-35 276.1 23.7 248 29-280 50-335 (597)
43 1ozn_A Reticulon 4 receptor; N 100.0 2.3E-31 7.7E-36 252.9 17.7 250 8-285 14-264 (285)
44 1ozn_A Reticulon 4 receptor; N 100.0 2.2E-31 7.4E-36 253.0 17.4 227 58-287 14-243 (285)
45 2z80_A TOLL-like receptor 2, v 100.0 7.3E-32 2.5E-36 264.4 14.2 257 5-263 52-318 (353)
46 2z66_A Variable lymphocyte rec 100.0 5.1E-31 1.7E-35 253.2 18.9 251 32-286 8-265 (306)
47 4fmz_A Internalin; leucine ric 100.0 1.9E-30 6.5E-35 253.8 23.2 258 3-281 42-299 (347)
48 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-31 8.4E-36 276.5 16.6 273 5-280 26-421 (549)
49 4fcg_A Uncharacterized protein 100.0 2.7E-30 9.4E-35 250.1 22.1 224 32-259 82-314 (328)
50 2z63_A TOLL-like receptor 4, v 100.0 2.8E-30 9.4E-35 269.9 23.5 116 1-118 48-164 (570)
51 4fcg_A Uncharacterized protein 100.0 2.3E-30 8E-35 250.6 21.2 226 4-235 80-314 (328)
52 1o6v_A Internalin A; bacterial 100.0 5.4E-30 1.8E-34 260.7 23.3 259 2-280 87-364 (466)
53 1o6v_A Internalin A; bacterial 100.0 9.1E-30 3.1E-34 259.0 24.0 255 3-280 66-320 (466)
54 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-29 1.1E-33 265.0 24.7 114 150-263 469-584 (635)
55 1wwl_A Monocyte differentiatio 100.0 3.8E-31 1.3E-35 254.6 6.2 244 5-260 43-310 (312)
56 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-28 4.6E-33 248.7 24.1 251 3-281 40-298 (457)
57 3bz5_A Internalin-J, INLJ; leu 100.0 2.4E-28 8.1E-33 246.9 23.9 237 2-264 61-304 (457)
58 3o53_A Protein LRIM1, AGAP0063 100.0 3E-30 1E-34 248.9 7.5 258 7-280 12-273 (317)
59 3o53_A Protein LRIM1, AGAP0063 100.0 1.7E-29 5.9E-34 243.5 10.8 242 32-285 11-253 (317)
60 2z62_A TOLL-like receptor 4, v 100.0 5.9E-28 2E-32 228.2 20.0 208 56-264 29-242 (276)
61 3oja_A Leucine-rich immune mol 100.0 3.3E-29 1.1E-33 255.4 11.2 241 32-286 35-286 (487)
62 2z62_A TOLL-like receptor 4, v 100.0 7.8E-28 2.7E-32 227.4 19.8 223 9-237 11-239 (276)
63 3oja_A Leucine-rich immune mol 100.0 3.5E-29 1.2E-33 255.2 11.2 222 53-286 32-254 (487)
64 1wwl_A Monocyte differentiatio 100.0 1.1E-29 3.7E-34 244.4 6.2 247 26-282 39-309 (312)
65 1p9a_G Platelet glycoprotein I 100.0 4.3E-27 1.5E-31 223.4 20.0 203 51-259 6-208 (290)
66 2o6q_A Variable lymphocyte rec 99.9 2.9E-26 9.9E-31 215.8 23.5 183 80-262 38-221 (270)
67 2o6q_A Variable lymphocyte rec 99.9 2.4E-26 8.2E-31 216.3 22.6 202 32-236 17-219 (270)
68 1p9a_G Platelet glycoprotein I 99.9 1.6E-26 5.6E-31 219.4 21.2 206 75-285 6-211 (290)
69 1jl5_A Outer protein YOPM; leu 99.9 1.1E-25 3.7E-30 227.2 23.1 248 5-283 131-410 (454)
70 1jl5_A Outer protein YOPM; leu 99.9 5E-25 1.7E-29 222.4 27.6 182 5-212 91-291 (454)
71 3g06_A SSPH2 (leucine-rich rep 99.9 4.8E-25 1.6E-29 229.4 26.7 240 6-282 41-297 (622)
72 2xwt_C Thyrotropin receptor; s 99.9 4.8E-26 1.6E-30 210.3 16.1 196 56-256 32-236 (239)
73 3rfs_A Internalin B, repeat mo 99.9 1.7E-26 5.8E-31 217.5 12.4 221 32-265 20-241 (272)
74 3rfs_A Internalin B, repeat mo 99.9 2.2E-25 7.6E-30 209.9 17.5 225 8-247 22-247 (272)
75 1z7x_W Ribonuclease inhibitor; 99.9 1E-28 3.6E-33 251.0 -7.1 276 3-280 26-352 (461)
76 3g06_A SSPH2 (leucine-rich rep 99.9 1.9E-24 6.5E-29 224.9 24.8 226 5-264 61-302 (622)
77 3goz_A Leucine-rich repeat-con 99.9 2E-27 6.7E-32 233.6 2.0 251 9-261 2-299 (362)
78 2xwt_C Thyrotropin receptor; s 99.9 3.7E-25 1.3E-29 204.3 16.7 199 29-233 29-237 (239)
79 1z7x_W Ribonuclease inhibitor; 99.9 5.2E-28 1.8E-32 245.9 -3.1 275 6-282 86-411 (461)
80 4glp_A Monocyte differentiatio 99.9 1E-25 3.5E-30 216.5 12.4 222 33-259 66-307 (310)
81 4glp_A Monocyte differentiatio 99.9 3E-25 1E-29 213.2 14.2 225 6-236 65-308 (310)
82 1h6u_A Internalin H; cell adhe 99.9 8.1E-25 2.8E-29 209.7 16.7 194 52-260 38-231 (308)
83 1h6u_A Internalin H; cell adhe 99.9 2.5E-24 8.5E-29 206.3 18.1 208 11-237 25-232 (308)
84 2ast_B S-phase kinase-associat 99.9 4.9E-26 1.7E-30 221.4 3.8 249 7-264 49-311 (336)
85 3m19_A Variable lymphocyte rec 99.9 1.2E-23 4E-28 195.7 19.4 177 33-212 16-193 (251)
86 2ca6_A RAN GTPase-activating p 99.9 1E-26 3.4E-31 230.7 -1.7 237 25-262 27-319 (386)
87 3m19_A Variable lymphocyte rec 99.9 1.7E-23 5.9E-28 194.5 19.8 180 56-261 15-194 (251)
88 2ca6_A RAN GTPase-activating p 99.9 2.9E-26 1E-30 227.4 -1.8 236 3-239 30-320 (386)
89 4ay9_X Follicle-stimulating ho 99.9 5.7E-23 1.9E-27 200.7 20.4 199 8-212 12-216 (350)
90 3goz_A Leucine-rich repeat-con 99.9 2.6E-25 9E-30 218.4 3.2 247 35-281 2-296 (362)
91 4asz_A BDNF/NT-3 growth factor 99.9 4.6E-25 1.6E-29 208.9 3.5 135 361-497 13-177 (299)
92 4aoj_A High affinity nerve gro 99.9 8.4E-25 2.9E-29 210.0 4.9 136 361-498 41-208 (329)
93 4ay9_X Follicle-stimulating ho 99.9 5.3E-23 1.8E-27 200.9 16.7 223 5-233 30-257 (350)
94 3hyh_A Carbon catabolite-derep 99.9 1.7E-24 5.8E-29 201.7 5.1 137 360-498 12-162 (275)
95 4fih_A Serine/threonine-protei 99.9 1.8E-24 6.1E-29 207.5 5.2 136 361-498 74-220 (346)
96 4b9d_A Serine/threonine-protei 99.9 1.8E-24 6.3E-29 207.8 4.8 137 360-498 23-175 (350)
97 4gt4_A Tyrosine-protein kinase 99.9 2E-24 6.7E-29 205.5 4.7 136 361-498 26-195 (308)
98 2ast_B S-phase kinase-associat 99.9 9.3E-25 3.2E-29 212.3 1.9 233 5-244 70-315 (336)
99 4aw0_A HPDK1, 3-phosphoinositi 99.9 2.6E-24 9E-29 203.3 4.6 137 360-498 31-182 (311)
100 4fie_A Serine/threonine-protei 99.9 5.6E-24 1.9E-28 209.2 5.8 136 361-498 151-297 (423)
101 4g31_A Eukaryotic translation 99.9 1.1E-23 3.9E-28 199.7 6.3 139 360-498 4-168 (299)
102 2o6s_A Variable lymphocyte rec 99.9 4E-22 1.4E-26 179.8 15.9 162 32-223 29-190 (208)
103 2o6s_A Variable lymphocyte rec 99.9 7E-22 2.4E-26 178.2 16.4 179 59-247 11-190 (208)
104 3omv_A RAF proto-oncogene seri 99.9 1.3E-23 4.3E-28 199.1 3.3 134 360-498 35-182 (307)
105 1h6t_A Internalin B; cell adhe 99.9 1.1E-21 3.8E-26 186.3 13.8 170 78-260 45-214 (291)
106 3fpq_A Serine/threonine-protei 99.9 6.3E-23 2.1E-27 192.9 5.0 135 364-498 29-182 (290)
107 3cvr_A Invasion plasmid antige 99.9 2.5E-21 8.4E-26 199.1 17.1 180 56-262 60-246 (571)
108 3ubd_A Ribosomal protein S6 ki 99.9 3.5E-23 1.2E-27 195.6 3.0 135 361-497 24-175 (304)
109 2v9t_B SLIT homolog 2 protein 99.9 3.6E-21 1.2E-25 174.9 15.4 150 107-259 15-165 (220)
110 2xot_A Amphoterin-induced prot 99.9 1.8E-21 6.1E-26 190.9 14.0 155 57-211 41-202 (361)
111 3cvr_A Invasion plasmid antige 99.9 6.2E-21 2.1E-25 196.1 18.4 189 32-247 60-255 (571)
112 4b99_A Mitogen-activated prote 99.9 8.5E-23 2.9E-27 201.1 3.9 138 361-498 54-208 (398)
113 2v70_A SLIT-2, SLIT homolog 2 99.9 1.3E-21 4.3E-26 177.9 11.1 154 107-263 15-170 (220)
114 1m9s_A Internalin B; cell inva 99.9 1.2E-21 4.2E-26 203.5 12.5 193 32-239 22-214 (605)
115 4ase_A Vascular endothelial gr 99.9 5.2E-23 1.8E-27 199.2 1.8 147 351-498 54-235 (353)
116 1h6t_A Internalin B; cell adhe 99.9 5E-21 1.7E-25 181.7 15.1 187 10-213 29-215 (291)
117 3hmm_A TGF-beta receptor type- 99.9 2E-22 7E-27 191.9 5.1 135 361-497 3-157 (303)
118 4g3f_A NF-kappa-beta-inducing 99.9 1.8E-22 6.1E-27 193.1 4.6 132 360-498 57-201 (336)
119 2v9t_B SLIT homolog 2 protein 99.8 2.6E-21 9E-26 175.8 11.3 153 131-285 15-168 (220)
120 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-20 5.5E-25 170.5 14.8 157 129-287 13-171 (220)
121 2xot_A Amphoterin-induced prot 99.8 8.2E-21 2.8E-25 186.2 13.7 177 58-260 21-203 (361)
122 1m9s_A Internalin B; cell inva 99.8 3.7E-20 1.3E-24 192.4 18.3 188 9-213 25-212 (605)
123 3e6j_A Variable lymphocyte rec 99.8 7E-20 2.4E-24 167.5 16.9 154 32-188 20-173 (229)
124 3e6j_A Variable lymphocyte rec 99.8 7.8E-20 2.7E-24 167.2 17.0 154 105-262 21-175 (229)
125 3ogk_B Coronatine-insensitive 99.8 4.7E-23 1.6E-27 216.1 -6.5 274 3-280 162-524 (592)
126 1xeu_A Internalin C; cellular 99.8 7E-21 2.4E-25 177.9 6.9 149 75-235 37-185 (263)
127 4ezg_A Putative uncharacterize 99.8 9.2E-20 3.1E-24 162.7 12.6 154 51-212 40-195 (197)
128 1xeu_A Internalin C; cellular 99.8 3.6E-20 1.2E-24 173.0 10.2 171 77-261 17-187 (263)
129 1dce_A Protein (RAB geranylger 99.8 1.1E-22 3.6E-27 210.3 -7.9 190 52-263 346-550 (567)
130 4ezg_A Putative uncharacterize 99.8 1.3E-19 4.3E-24 161.7 13.1 154 100-260 41-195 (197)
131 1w8a_A SLIT protein; signaling 99.8 7E-20 2.4E-24 162.6 9.8 155 130-286 11-166 (192)
132 1dce_A Protein (RAB geranylger 99.8 4E-22 1.4E-26 205.9 -6.3 203 28-253 347-567 (567)
133 3uto_A Twitchin; kinase, muscl 99.8 2.3E-20 7.8E-25 192.9 6.2 137 360-498 156-307 (573)
134 4f9c_A Cell division cycle 7-r 99.8 1.5E-20 5.1E-25 183.1 4.3 137 357-497 17-167 (361)
135 4b8c_D Glucose-repressible alc 99.8 3.7E-20 1.3E-24 197.1 7.1 218 32-260 174-405 (727)
136 3v5w_A G-protein coupled recep 99.8 3.4E-20 1.2E-24 190.8 5.8 137 360-498 188-342 (689)
137 3ogk_B Coronatine-insensitive 99.8 3E-21 1E-25 202.3 -2.1 257 3-261 190-528 (592)
138 3sb4_A Hypothetical leucine ri 99.8 2.2E-19 7.6E-24 173.7 10.7 102 149-252 225-327 (329)
139 4fdw_A Leucine rich hypothetic 99.8 1.8E-17 6E-22 163.9 19.2 244 4-261 112-360 (401)
140 1w8a_A SLIT protein; signaling 99.8 2.7E-18 9.3E-23 152.3 11.6 173 106-285 11-186 (192)
141 2c30_A Serine/threonine-protei 99.8 1.1E-18 3.8E-23 168.1 8.8 149 347-497 21-190 (321)
142 2qkw_B Protein kinase; three-h 99.7 2.1E-19 7.2E-24 173.3 3.0 145 351-497 29-188 (321)
143 3qd2_B Eukaryotic translation 99.7 1E-18 3.5E-23 169.1 7.5 140 359-498 4-214 (332)
144 2wfh_A SLIT homolog 2 protein 99.7 3.2E-18 1.1E-22 151.8 9.8 130 130-262 13-142 (193)
145 2p1m_B Transport inhibitor res 99.7 4.2E-20 1.4E-24 193.7 -2.9 179 101-281 287-493 (594)
146 3fxz_A Serine/threonine-protei 99.7 9.6E-19 3.3E-23 166.7 5.9 136 360-497 19-165 (297)
147 4fdw_A Leucine rich hypothetic 99.7 1.4E-16 4.6E-21 157.5 21.1 237 32-280 114-356 (401)
148 2ell_A Acidic leucine-rich nuc 99.7 8.6E-18 3E-22 145.8 11.1 132 31-164 24-161 (168)
149 3niz_A Rhodanese family protei 99.7 5.8E-19 2E-23 169.4 4.0 137 359-497 19-168 (311)
150 4aw2_A Serine/threonine-protei 99.7 2.4E-19 8.2E-24 179.3 1.3 144 352-497 65-224 (437)
151 2zv2_A Calcium/calmodulin-depe 99.7 1.9E-18 6.4E-23 164.8 7.4 138 360-497 12-186 (298)
152 2p1m_B Transport inhibitor res 99.7 6.2E-20 2.1E-24 192.4 -3.6 275 3-281 103-468 (594)
153 3o0g_A Cell division protein k 99.7 1.1E-18 3.7E-23 166.0 5.2 135 361-497 2-150 (292)
154 2pmi_A Negative RE, cyclin-dep 99.7 1.1E-18 3.7E-23 168.0 5.2 137 359-497 3-157 (317)
155 3uim_A Brassinosteroid insensi 99.7 7E-19 2.4E-23 170.0 3.9 150 347-498 16-184 (326)
156 3ugc_A Tyrosine-protein kinase 99.7 6.9E-19 2.4E-23 167.5 3.8 138 360-497 9-163 (295)
157 3fe3_A MAP/microtubule affinit 99.7 6.1E-19 2.1E-23 170.2 3.3 138 358-497 12-163 (328)
158 3rp9_A Mitogen-activated prote 99.7 8.4E-19 2.9E-23 177.7 3.8 139 360-498 52-206 (458)
159 2ell_A Acidic leucine-rich nuc 99.7 1.4E-17 4.8E-22 144.4 11.0 133 55-211 24-160 (168)
160 3h4j_B AMPK kdaid, SNF1-like p 99.7 1E-18 3.6E-23 169.0 4.2 136 360-497 8-157 (336)
161 4b8c_D Glucose-repressible alc 99.7 9.4E-19 3.2E-23 186.3 4.1 220 5-235 173-404 (727)
162 3zgw_A Maternal embryonic leuc 99.7 1.6E-18 5.4E-23 168.4 5.2 137 359-497 8-157 (347)
163 2o6r_A Variable lymphocyte rec 99.7 4.5E-17 1.5E-21 142.5 14.0 133 129-263 9-141 (177)
164 3sb4_A Hypothetical leucine ri 99.7 4E-18 1.4E-22 164.8 7.9 223 32-264 50-315 (329)
165 3s95_A LIMK-1, LIM domain kina 99.7 2.7E-18 9.2E-23 164.6 6.3 136 360-497 9-157 (310)
166 3ttj_A Mitogen-activated prote 99.7 1.3E-18 4.6E-23 175.8 4.1 138 360-497 61-213 (464)
167 3v8s_A RHO-associated protein 99.7 1.1E-18 3.9E-23 173.1 3.4 143 353-497 61-217 (410)
168 1ob3_A PFPK5, cell division co 99.7 1E-18 3.5E-23 165.7 2.6 135 361-497 2-149 (288)
169 2qol_A Ephrin receptor; recept 99.7 2E-18 6.9E-23 169.8 3.7 136 361-498 45-197 (373)
170 4fr4_A YANK1, serine/threonine 99.7 3.3E-18 1.1E-22 168.2 5.1 137 360-498 14-165 (384)
171 3kul_A Ephrin type-A receptor 99.7 4E-18 1.4E-22 164.6 5.5 137 360-498 48-201 (325)
172 3oz6_A Mitogen-activated prote 99.7 2.3E-18 8E-23 170.5 3.9 140 358-497 6-158 (388)
173 1o6l_A RAC-beta serine/threoni 99.7 3.9E-18 1.3E-22 165.1 5.3 136 360-497 4-154 (337)
174 3tki_A Serine/threonine-protei 99.7 3.6E-18 1.2E-22 164.7 5.0 136 360-497 6-154 (323)
175 2yab_A Death-associated protei 99.7 8.4E-18 2.9E-22 164.3 7.6 136 360-497 11-168 (361)
176 2vd5_A DMPK protein; serine/th 99.7 1.7E-18 5.8E-23 171.9 2.7 144 352-497 52-211 (412)
177 4euu_A Serine/threonine-protei 99.7 2.9E-18 1E-22 165.1 4.1 138 361-498 9-166 (319)
178 1fot_A TPK1 delta, CAMP-depend 99.7 5.6E-18 1.9E-22 162.8 6.0 136 360-497 5-155 (318)
179 2psq_A Fibroblast growth facto 99.7 3.1E-18 1.1E-22 168.3 4.2 136 360-497 80-252 (370)
180 3n9x_A Phosphotransferase; mal 99.7 2.6E-18 8.8E-23 172.5 3.5 139 360-498 25-179 (432)
181 2wfh_A SLIT homolog 2 protein 99.7 1.2E-16 4.2E-21 141.6 13.8 127 106-235 13-139 (193)
182 4hcu_A Tyrosine-protein kinase 99.7 4.7E-18 1.6E-22 159.4 4.9 135 360-497 9-155 (269)
183 3pg1_A Mitogen-activated prote 99.7 4.4E-18 1.5E-22 166.9 4.8 146 352-497 13-183 (362)
184 3cbl_A C-FES, proto-oncogene t 99.7 2.5E-18 8.4E-23 169.6 2.7 138 358-497 111-262 (377)
185 3p86_A Serine/threonine-protei 99.7 5.4E-18 1.9E-22 162.4 5.0 140 355-497 31-188 (309)
186 2nru_A Interleukin-1 receptor- 99.7 9.4E-18 3.2E-22 160.6 6.2 148 347-497 11-182 (307)
187 1rdq_E PKA C-alpha, CAMP-depen 99.7 6.6E-18 2.3E-22 164.5 5.0 136 360-497 40-190 (350)
188 3c0i_A Peripheral plasma membr 99.7 5.5E-18 1.9E-22 165.4 4.2 137 360-498 23-183 (351)
189 1k9a_A Carboxyl-terminal SRC k 99.7 7.8E-18 2.7E-22 169.9 5.4 136 358-497 190-338 (450)
190 1u5q_A Serine/threonine protei 99.7 5.2E-18 1.8E-22 165.2 3.9 135 361-497 54-203 (348)
191 2je0_A Acidic leucine-rich nuc 99.7 4.1E-17 1.4E-21 138.4 8.8 125 128-254 18-148 (149)
192 1qcf_A Haematopoetic cell kina 99.7 7.8E-18 2.7E-22 170.2 5.0 138 357-498 184-334 (454)
193 4e5w_A Tyrosine-protein kinase 99.7 1E-17 3.5E-22 159.9 5.5 137 361-497 21-175 (302)
194 2je0_A Acidic leucine-rich nuc 99.7 4.6E-17 1.6E-21 138.1 9.0 130 101-231 15-149 (149)
195 3vhe_A Vascular endothelial gr 99.7 1.9E-18 6.7E-23 169.2 0.5 147 350-497 11-242 (359)
196 3rgf_A Cyclin-dependent kinase 99.7 5.1E-18 1.7E-22 169.1 3.5 135 361-497 20-181 (405)
197 2eue_A Carbon catabolite derep 99.7 1E-17 3.5E-22 157.7 5.3 136 360-497 12-161 (275)
198 4eqm_A Protein kinase; transfe 99.7 8.5E-18 2.9E-22 159.8 4.7 135 361-497 11-160 (294)
199 3txo_A PKC-L, NPKC-ETA, protei 99.7 5.9E-18 2E-22 165.0 3.6 138 358-497 20-173 (353)
200 2y0a_A Death-associated protei 99.7 1.5E-17 5.1E-22 160.6 6.4 137 360-498 10-168 (326)
201 2y94_A 5'-AMP-activated protei 99.7 1.5E-17 5E-22 168.1 6.4 137 360-498 15-166 (476)
202 3lxl_A Tyrosine-protein kinase 99.7 8.4E-18 2.9E-22 162.5 4.5 138 360-497 22-176 (327)
203 3mi9_A Cell division protein k 99.7 9.1E-18 3.1E-22 163.9 4.6 138 360-497 16-173 (351)
204 4eut_A Serine/threonine-protei 99.7 7E-18 2.4E-22 167.4 3.7 138 361-498 9-166 (396)
205 2vuw_A Serine/threonine-protei 99.7 8.7E-18 3E-22 163.0 4.3 138 360-498 19-232 (336)
206 3hko_A Calcium/calmodulin-depe 99.7 1.4E-17 4.7E-22 162.2 5.6 140 356-497 21-219 (345)
207 2fst_X Mitogen-activated prote 99.7 9.9E-18 3.4E-22 164.4 4.5 138 360-497 28-181 (367)
208 4dc2_A Protein kinase C IOTA t 99.7 7.7E-18 2.6E-22 166.2 3.7 137 359-497 50-202 (396)
209 3sxs_A Cytoplasmic tyrosine-pr 99.7 1.4E-17 4.8E-22 156.1 5.3 136 359-497 6-153 (268)
210 2acx_A G protein-coupled recep 99.7 1.1E-17 3.8E-22 171.6 4.9 138 359-498 182-336 (576)
211 3soc_A Activin receptor type-2 99.7 1.5E-17 5.1E-22 160.3 5.5 137 359-497 22-180 (322)
212 3eb0_A Putative uncharacterize 99.7 1.1E-17 3.8E-22 165.3 4.6 138 357-498 3-192 (383)
213 3a8x_A Protein kinase C IOTA t 99.7 1.2E-17 4E-22 162.5 4.6 136 360-497 8-159 (345)
214 2bdw_A Hypothetical protein K1 99.7 1.7E-17 5.8E-22 162.5 5.9 138 358-497 26-180 (362)
215 3is5_A Calcium-dependent prote 99.7 2.3E-17 7.7E-22 156.2 6.5 135 361-497 22-176 (285)
216 2o6r_A Variable lymphocyte rec 99.7 4.1E-16 1.4E-20 136.3 14.1 129 33-164 9-138 (177)
217 1opk_A P150, C-ABL, proto-onco 99.7 9.6E-18 3.3E-22 171.2 4.1 137 359-498 218-368 (495)
218 3uc3_A Serine/threonine-protei 99.7 1.8E-17 6.1E-22 162.3 5.8 135 359-496 18-166 (361)
219 3mtl_A Cell division protein k 99.7 3.3E-18 1.1E-22 165.1 0.5 135 361-497 2-149 (324)
220 3ork_A Serine/threonine protei 99.7 1E-17 3.4E-22 160.8 3.9 138 360-497 11-165 (311)
221 3byv_A Rhoptry kinase; malaria 99.7 4.7E-18 1.6E-22 167.7 1.3 138 360-497 72-255 (377)
222 1xjd_A Protein kinase C, theta 99.7 9.8E-18 3.4E-22 162.8 3.5 139 357-497 13-167 (345)
223 1cm8_A Phosphorylated MAP kina 99.7 6.8E-18 2.3E-22 165.7 2.4 138 360-497 24-177 (367)
224 3gen_A Tyrosine-protein kinase 99.7 1.8E-17 6E-22 156.7 5.2 137 358-497 21-169 (283)
225 2xrw_A Mitogen-activated prote 99.7 1.1E-17 3.9E-22 164.5 4.0 138 360-497 24-176 (371)
226 3p1a_A MYT1 kinase, membrane-a 99.7 9.7E-18 3.3E-22 160.8 3.4 135 361-497 57-206 (311)
227 2x4f_A Myosin light chain kina 99.7 1.4E-17 4.9E-22 163.6 4.6 133 364-498 92-239 (373)
228 1tki_A Titin; serine kinase, m 99.7 1.7E-17 5.8E-22 159.8 5.1 136 360-498 4-154 (321)
229 3a62_A Ribosomal protein S6 ki 99.7 1.3E-17 4.5E-22 161.1 4.2 136 360-497 16-170 (327)
230 3gbz_A Kinase, CMGC CDK; ssgci 99.7 8.2E-18 2.8E-22 162.7 2.7 142 354-497 27-186 (329)
231 1kob_A Twitchin; kinase, intra 99.7 2.1E-17 7.2E-22 163.0 5.6 137 360-498 50-201 (387)
232 2w1i_A JAK2; chromosomal rearr 99.7 1.9E-17 6.5E-22 159.9 5.1 139 360-498 40-195 (326)
233 3soa_A Calcium/calmodulin-depe 99.7 2.1E-17 7E-22 165.9 5.4 138 358-497 8-162 (444)
234 3qup_A Tyrosine-protein kinase 99.7 1.6E-17 5.4E-22 160.2 4.4 140 358-497 20-186 (323)
235 1fmk_A C-SRC, P60-SRC, tyrosin 99.7 1.4E-17 4.7E-22 168.2 4.1 136 358-497 181-329 (452)
236 3qyz_A Mitogen-activated prote 99.7 1.2E-17 4.1E-22 163.9 3.5 140 359-498 25-178 (364)
237 4fvq_A Tyrosine-protein kinase 99.7 1.8E-17 6.3E-22 157.1 4.3 136 360-497 7-170 (289)
238 3l9p_A Anaplastic lymphoma kin 99.7 9.8E-18 3.4E-22 164.6 2.5 135 360-496 70-232 (367)
239 3tt0_A Basic fibroblast growth 99.7 1.3E-17 4.4E-22 164.8 3.3 136 360-497 68-240 (382)
240 1ua2_A CAK, cell division prot 99.7 1.2E-17 4.1E-22 162.7 2.9 138 358-497 7-161 (346)
241 3lxp_A Non-receptor tyrosine-p 99.7 3.8E-17 1.3E-21 157.2 6.4 135 363-497 33-183 (318)
242 3f3z_A Calcium/calmodulin-depe 99.7 3.3E-17 1.1E-21 154.3 5.9 136 360-497 8-158 (277)
243 3poz_A Epidermal growth factor 99.7 7.8E-18 2.7E-22 162.7 1.6 136 360-497 14-166 (327)
244 3gni_B Strad alpha; kinase fol 99.7 2.1E-17 7E-22 163.8 4.6 136 359-496 23-176 (389)
245 2ivs_A Proto-oncogene tyrosine 99.7 1.6E-17 5.6E-22 159.4 3.7 138 358-497 20-199 (314)
246 4agu_A Cyclin-dependent kinase 99.7 1.9E-17 6.5E-22 158.8 4.0 135 361-497 3-151 (311)
247 3c4z_A Rhodopsin kinase; Ser/T 99.7 2.6E-17 9E-22 168.3 5.2 137 360-498 184-339 (543)
248 3g33_A Cell division protein k 99.7 1.7E-17 5.9E-22 158.8 3.6 139 359-497 7-169 (308)
249 1luf_A Muscle-specific tyrosin 99.7 1.7E-17 5.7E-22 161.5 3.5 139 357-497 43-223 (343)
250 2h8h_A Proto-oncogene tyrosine 99.7 1.6E-17 5.4E-22 171.1 3.4 139 356-498 262-413 (535)
251 3fdn_A Serine/threonine-protei 99.7 3.2E-17 1.1E-21 154.6 5.2 138 358-497 6-158 (279)
252 2wtk_C Serine/threonine-protei 99.7 2.3E-17 8E-22 157.7 4.2 138 360-497 4-158 (305)
253 3c1x_A Hepatocyte growth facto 99.7 1.9E-17 6.6E-22 162.6 3.6 135 362-497 90-241 (373)
254 3dbq_A Dual specificity protei 99.7 2.6E-17 8.9E-22 160.1 4.3 135 360-497 8-156 (343)
255 1qpc_A LCK kinase; alpha beta 99.7 1.7E-17 5.8E-22 156.5 2.9 136 358-497 10-158 (279)
256 2r5t_A Serine/threonine-protei 99.7 2.4E-17 8.1E-22 161.7 4.0 137 359-497 36-188 (373)
257 1p4o_A Insulin-like growth fac 99.7 9.1E-18 3.1E-22 161.8 1.0 145 351-497 15-187 (322)
258 4ejn_A RAC-alpha serine/threon 99.7 1.7E-17 5.8E-22 167.4 3.0 137 359-497 146-298 (446)
259 2buj_A Serine/threonine-protei 99.7 3.1E-17 1.1E-21 157.7 4.7 139 359-497 27-183 (317)
260 1j1b_A Glycogen synthase kinas 99.7 1.6E-17 5.5E-22 166.0 2.7 134 361-498 54-207 (420)
261 3nsz_A CK II alpha, casein kin 99.7 4E-17 1.4E-21 157.9 5.4 135 360-497 35-180 (330)
262 2zmd_A Dual specificity protei 99.7 3.3E-17 1.1E-21 162.1 4.8 134 361-497 56-203 (390)
263 1mp8_A Focal adhesion kinase 1 99.7 3.4E-17 1.2E-21 154.6 4.4 136 359-497 13-165 (281)
264 1a9n_A U2A', U2A'; complex (nu 99.7 1.6E-16 5.6E-21 138.8 8.5 134 123-259 15-153 (176)
265 2ac3_A MAP kinase-interacting 99.7 6.5E-17 2.2E-21 155.4 6.3 135 361-497 12-163 (316)
266 3i6u_A CDS1, serine/threonine- 99.7 6.1E-17 2.1E-21 161.8 6.2 137 358-497 132-291 (419)
267 2i6l_A Mitogen-activated prote 99.7 2.8E-17 9.7E-22 158.1 3.7 137 361-497 11-170 (320)
268 2w4o_A Calcium/calmodulin-depe 99.7 3.6E-17 1.2E-21 159.4 4.4 135 359-497 51-200 (349)
269 3pls_A Macrophage-stimulating 99.7 3E-17 1E-21 156.3 3.8 135 362-497 22-173 (298)
270 4aaa_A Cyclin-dependent kinase 99.7 3.5E-17 1.2E-21 158.4 4.1 137 359-497 23-173 (331)
271 3kex_A Receptor tyrosine-prote 99.6 2.3E-17 7.8E-22 159.3 2.7 135 361-498 13-165 (325)
272 3brb_A Proto-oncogene tyrosine 99.6 3.8E-17 1.3E-21 156.8 4.2 142 356-497 29-196 (313)
273 3q4u_A Activin receptor type-1 99.6 8.8E-17 3E-21 153.3 6.7 134 360-497 7-162 (301)
274 2izr_A Casein kinase I isoform 99.6 1.9E-17 6.4E-22 160.2 1.9 133 361-497 9-159 (330)
275 3gxj_A TGF-beta receptor type- 99.6 6.6E-17 2.3E-21 154.3 5.6 133 361-497 3-157 (303)
276 2wqm_A Serine/threonine-protei 99.6 8.2E-17 2.8E-21 154.3 6.3 137 359-497 30-185 (310)
277 2b9h_A MAP kinase FUS3, mitoge 99.6 2.8E-17 9.7E-22 160.5 3.1 138 360-497 10-161 (353)
278 1a9n_A U2A', U2A'; complex (nu 99.6 1.3E-16 4.5E-21 139.4 7.0 109 51-163 15-126 (176)
279 2yex_A Serine/threonine-protei 99.6 1.6E-16 5.4E-21 149.5 8.0 137 359-497 5-154 (276)
280 2xir_A Vascular endothelial gr 99.6 1.8E-17 6.2E-22 159.2 1.5 147 350-497 16-197 (316)
281 2pvf_A Fibroblast growth facto 99.6 3.3E-17 1.1E-21 158.8 3.4 137 359-497 33-206 (334)
282 4exu_A Mitogen-activated prote 99.6 3E-17 1E-21 161.5 3.1 138 360-497 41-193 (371)
283 3cok_A Serine/threonine-protei 99.6 5.5E-17 1.9E-21 152.9 4.7 137 359-497 9-161 (278)
284 3lzb_A Epidermal growth factor 99.6 4.3E-17 1.5E-21 157.5 4.0 137 360-498 14-167 (327)
285 3kfa_A Tyrosine-protein kinase 99.6 1.6E-17 5.6E-22 157.4 1.0 137 358-497 10-160 (288)
286 2j7t_A Serine/threonine-protei 99.6 5.6E-17 1.9E-21 154.8 4.7 135 359-495 17-164 (302)
287 2ozo_A Tyrosine-protein kinase 99.6 4.6E-17 1.6E-21 170.2 4.4 134 362-498 336-486 (613)
288 2a2a_A Death-associated protei 99.6 8.8E-17 3E-21 154.9 6.1 136 360-497 11-168 (321)
289 3e7e_A HBUB1, BUB1A, mitotic c 99.6 4E-17 1.4E-21 160.2 3.6 135 358-497 62-232 (365)
290 3t9t_A Tyrosine-protein kinase 99.6 5.4E-17 1.8E-21 151.9 4.3 135 360-497 7-153 (267)
291 2w5a_A Serine/threonine-protei 99.6 6.7E-17 2.3E-21 152.4 4.9 139 359-497 4-165 (279)
292 2owb_A Serine/threonine-protei 99.6 6.4E-17 2.2E-21 156.8 4.8 136 360-497 40-190 (335)
293 3llt_A Serine/threonine kinase 99.6 2.2E-17 7.4E-22 161.8 1.5 147 348-497 22-211 (360)
294 3f66_A Hepatocyte growth facto 99.6 4.3E-17 1.5E-21 155.2 3.5 136 361-497 25-177 (298)
295 2rku_A Serine/threonine-protei 99.6 6.6E-17 2.3E-21 153.7 4.7 136 360-497 14-164 (294)
296 3ll6_A Cyclin G-associated kin 99.6 3.7E-17 1.3E-21 158.5 2.9 138 360-497 27-187 (337)
297 3dls_A PAS domain-containing s 99.6 4E-17 1.4E-21 158.1 3.1 138 359-498 22-180 (335)
298 1t46_A HOMO sapiens V-KIT hard 99.6 3E-17 1E-21 157.4 2.2 138 358-497 20-194 (313)
299 1rjb_A FL cytokine receptor; k 99.6 3.5E-17 1.2E-21 159.3 2.6 139 357-497 41-221 (344)
300 3kmu_A ILK, integrin-linked ki 99.6 4.4E-17 1.5E-21 152.8 3.2 136 360-496 9-161 (271)
301 3coi_A Mitogen-activated prote 99.6 5.4E-17 1.8E-21 158.6 3.8 138 360-497 23-175 (353)
302 3lb7_A RAF proto-oncogene seri 99.6 5E-17 1.7E-21 155.5 3.5 133 360-497 35-181 (307)
303 1byg_A CSK, protein (C-termina 99.6 5.8E-17 2E-21 152.7 3.8 135 359-497 19-166 (278)
304 3eqc_A Dual specificity mitoge 99.6 9.1E-17 3.1E-21 157.4 5.3 135 360-496 32-180 (360)
305 2clq_A Mitogen-activated prote 99.6 1.2E-16 4.1E-21 151.9 5.9 133 363-497 24-172 (295)
306 2r3i_A Cell division protein k 99.6 4.3E-17 1.5E-21 155.3 2.8 136 360-497 2-152 (299)
307 2i0e_A Protein kinase C-beta I 99.6 5.4E-17 1.9E-21 158.0 3.6 138 358-497 17-170 (353)
308 1u59_A Tyrosine-protein kinase 99.6 7.6E-17 2.6E-21 152.7 4.5 135 361-498 9-160 (287)
309 2y7j_A Phosphorylase B kinase 99.6 1.9E-16 6.4E-21 155.3 7.2 141 355-497 88-249 (365)
310 3nyv_A Calmodulin-domain prote 99.6 1E-16 3.6E-21 163.4 5.5 136 360-497 25-178 (484)
311 3lij_A Calcium/calmodulin depe 99.6 1.2E-16 4.3E-21 163.1 6.0 136 360-497 36-188 (494)
312 2pml_X PFPK7, Ser/Thr protein 99.6 1E-16 3.5E-21 156.2 5.1 135 360-497 30-201 (348)
313 3bhy_A Death-associated protei 99.6 1.7E-16 5.7E-21 149.9 6.2 135 361-497 5-161 (283)
314 3a7i_A MST3 kinase, serine/thr 99.6 1.8E-16 6.1E-21 151.4 6.5 135 361-497 22-168 (303)
315 2a19_B Interferon-induced, dou 99.6 1.1E-16 3.7E-21 151.3 4.9 135 359-497 9-171 (284)
316 3kk8_A Calcium/calmodulin depe 99.6 1E-16 3.5E-21 151.5 4.7 136 360-497 5-157 (284)
317 3mwu_A Calmodulin-domain prote 99.6 1E-16 3.5E-21 163.5 5.0 137 359-497 20-173 (486)
318 2h6d_A 5'-AMP-activated protei 99.6 1.5E-16 5.1E-21 149.7 5.7 136 360-497 10-160 (276)
319 4e7w_A Glycogen synthase kinas 99.6 6.4E-17 2.2E-21 160.3 3.3 135 360-498 39-192 (394)
320 3fme_A Dual specificity mitoge 99.6 8.7E-17 3E-21 152.4 4.0 137 359-497 5-159 (290)
321 2jam_A Calcium/calmodulin-depe 99.6 9.4E-17 3.2E-21 153.4 4.2 137 359-497 7-158 (304)
322 3an0_A Dual specificity mitoge 99.6 7.2E-17 2.5E-21 156.8 3.4 138 358-497 48-203 (340)
323 2vgo_A Serine/threonine-protei 99.6 1.4E-16 4.6E-21 150.7 4.9 136 360-497 13-163 (284)
324 3q5i_A Protein kinase; CDPK, m 99.6 1.8E-16 6.2E-21 162.4 6.2 137 359-497 34-198 (504)
325 1vzo_A Ribosomal protein S6 ki 99.6 5.9E-17 2E-21 158.3 2.5 136 360-497 53-208 (355)
326 1zy4_A Serine/threonine-protei 99.6 1.6E-16 5.5E-21 151.5 5.4 138 359-497 4-165 (303)
327 3op5_A Serine/threonine-protei 99.6 8.1E-17 2.8E-21 158.0 3.4 140 359-498 33-204 (364)
328 3kn6_A Ribosomal protein S6 ki 99.6 1.8E-16 6E-21 153.0 5.7 131 362-497 9-158 (325)
329 1x8b_A WEE1HU, WEE1-like prote 99.6 2.1E-16 7.2E-21 149.5 6.1 137 359-497 9-183 (289)
330 3e3p_A Protein kinase, putativ 99.6 1.1E-16 3.8E-21 156.8 4.2 144 354-498 16-182 (360)
331 1mqb_A Ephrin type-A receptor 99.6 1E-16 3.6E-21 155.1 4.0 135 361-497 44-196 (333)
332 4f0f_A Serine/threonine-protei 99.6 1.4E-16 4.9E-21 150.8 4.8 133 360-496 18-177 (287)
333 2eva_A TAK1 kinase - TAB1 chim 99.6 1.1E-16 3.9E-21 153.0 4.1 131 360-497 7-155 (307)
334 3uqc_A Probable conserved tran 99.6 2.3E-16 8E-21 149.1 6.1 132 361-494 31-175 (286)
335 2vwi_A Serine/threonine-protei 99.6 3.7E-17 1.3E-21 156.0 0.4 139 357-497 11-170 (303)
336 2h34_A Serine/threonine-protei 99.6 1.5E-16 5.2E-21 152.3 4.7 137 359-497 32-183 (309)
337 1xbb_A Tyrosine-protein kinase 99.6 7.7E-17 2.6E-21 153.0 2.3 138 358-498 13-167 (291)
338 1ds9_A Outer arm dynein; leuci 99.6 4.9E-18 1.7E-22 151.6 -5.9 112 74-189 43-155 (198)
339 2ycf_A Serine/threonine-protei 99.6 2.2E-16 7.4E-21 152.2 5.1 136 360-498 9-167 (322)
340 1blx_A Cyclin-dependent kinase 99.6 1.2E-16 4E-21 154.3 3.1 140 358-497 8-169 (326)
341 1fvr_A Tyrosine-protein kinase 99.6 1.9E-16 6.5E-21 152.9 4.6 134 361-496 25-190 (327)
342 3dtc_A Mitogen-activated prote 99.6 2.6E-16 8.8E-21 147.6 5.2 135 360-497 6-165 (271)
343 3cc6_A Protein tyrosine kinase 99.6 1.3E-16 4.4E-21 150.6 3.1 136 359-497 10-162 (281)
344 2x7f_A TRAF2 and NCK-interacti 99.6 6.1E-17 2.1E-21 156.3 0.8 146 351-497 14-178 (326)
345 2qr7_A Ribosomal protein S6 ki 99.6 1.2E-16 4.2E-21 155.0 2.7 133 359-497 20-169 (342)
346 3og7_A AKAP9-BRAF fusion prote 99.6 1.4E-16 4.9E-21 150.9 3.1 134 359-497 22-169 (289)
347 3kvw_A DYRK2, dual specificity 99.6 1.7E-16 5.8E-21 159.0 3.5 135 360-497 96-251 (429)
348 1phk_A Phosphorylase kinase; g 99.6 2.5E-16 8.6E-21 149.9 4.4 138 358-497 14-173 (298)
349 3q60_A ROP5B; pseudokinase, tr 99.6 2.1E-16 7.3E-21 155.4 3.9 137 360-497 61-243 (371)
350 1csn_A Casein kinase-1; phosph 99.6 2.1E-16 7.3E-21 150.4 3.7 134 360-497 9-160 (298)
351 3com_A Serine/threonine-protei 99.6 3.1E-16 1.1E-20 150.5 4.9 135 359-497 27-174 (314)
352 3pfq_A PKC-B, PKC-beta, protei 99.6 2.4E-16 8.3E-21 166.3 4.5 138 358-497 338-491 (674)
353 2i1m_A Macrophage colony-stimu 99.6 8.7E-17 3E-21 155.7 1.0 140 356-497 41-213 (333)
354 3lm5_A Serine/threonine-protei 99.6 3.5E-16 1.2E-20 151.0 5.0 145 351-497 18-183 (327)
355 4fl3_A Tyrosine-protein kinase 99.6 2.1E-16 7.3E-21 165.6 3.7 129 367-498 375-519 (635)
356 2wei_A Calmodulin-domain prote 99.6 5.4E-16 1.8E-20 146.8 5.4 137 359-497 20-173 (287)
357 3aln_A Dual specificity mitoge 99.6 3.3E-16 1.1E-20 151.3 3.9 136 360-497 21-175 (327)
358 2v62_A Serine/threonine-protei 99.6 4E-16 1.4E-20 151.8 4.6 138 361-498 37-203 (345)
359 1t4h_A Serine/threonine-protei 99.6 3.9E-16 1.3E-20 148.0 4.3 136 362-497 27-181 (290)
360 2pzi_A Probable serine/threoni 99.6 3.2E-16 1.1E-20 166.3 3.9 136 361-497 80-230 (681)
361 2yfx_A Tyrosine-protein kinase 99.6 2E-16 6.9E-21 152.8 2.0 136 359-496 28-191 (327)
362 1ds9_A Outer arm dynein; leuci 99.6 5.6E-18 1.9E-22 151.2 -8.3 132 122-259 43-185 (198)
363 3mdy_A Bone morphogenetic prot 99.6 1.2E-15 4.3E-20 147.7 7.4 138 356-497 32-191 (337)
364 3cek_A Dual specificity protei 99.6 1.2E-16 4.2E-21 153.3 0.1 145 350-497 17-175 (313)
365 1nxk_A MAP kinase-activated pr 99.6 5.4E-16 1.9E-20 153.8 4.6 133 360-497 60-213 (400)
366 2rio_A Serine/threonine-protei 99.6 5E-16 1.7E-20 155.9 4.3 131 363-498 17-178 (434)
367 1b6c_B TGF-B superfamily recep 99.6 1.4E-15 4.8E-20 147.8 7.3 138 356-497 37-196 (342)
368 3g2f_A Bone morphogenetic prot 99.6 1.2E-15 4.2E-20 147.8 6.4 135 359-497 11-169 (336)
369 1u46_A ACK-1, activated CDC42 99.6 3.7E-16 1.3E-20 148.1 2.6 135 360-497 17-170 (291)
370 2j0j_A Focal adhesion kinase 1 99.6 6E-16 2.1E-20 162.8 4.3 137 358-497 387-540 (656)
371 1wak_A Serine/threonine-protei 99.6 3.3E-16 1.1E-20 155.4 1.4 125 360-485 36-184 (397)
372 1zar_A RIO2 kinase; serine kin 99.6 1.4E-15 4.8E-20 143.1 5.5 138 352-498 81-242 (282)
373 3g39_A Variable lymphocyte rec 99.6 2.4E-14 8.3E-19 124.0 12.1 89 174-262 30-118 (170)
374 2iwi_A Serine/threonine-protei 99.6 2.5E-16 8.7E-21 151.0 -0.7 141 357-498 27-190 (312)
375 3m2w_A MAP kinase-activated pr 99.6 1.6E-15 5.6E-20 144.4 4.8 134 360-498 16-170 (299)
376 2jii_A Serine/threonine-protei 99.6 2.2E-16 7.6E-21 154.1 -1.3 131 361-497 42-210 (352)
377 3g39_A Variable lymphocyte rec 99.5 2.8E-14 9.7E-19 123.6 12.1 108 128-237 10-117 (170)
378 3p23_A Serine/threonine-protei 99.5 8.2E-16 2.8E-20 153.9 2.2 134 360-498 23-173 (432)
379 2dyl_A Dual specificity mitoge 99.5 1.7E-15 5.7E-20 145.6 4.2 137 358-497 22-174 (318)
380 3sv0_A Casein kinase I-like; t 99.5 2.1E-15 7.2E-20 152.6 5.0 135 360-497 6-155 (483)
381 4hgt_A Casein kinase I isoform 99.5 1.1E-15 3.6E-20 145.4 2.2 136 359-497 7-157 (296)
382 3uzp_A CKI-delta, CKID, casein 99.5 1.8E-15 6.1E-20 143.8 3.7 135 360-497 8-157 (296)
383 2r9u_A Variable lymphocyte rec 99.5 4.8E-14 1.6E-18 122.6 12.2 104 130-235 15-118 (174)
384 3qa8_A MGC80376 protein; kinas 99.5 5.7E-16 2E-20 160.6 -0.7 138 360-497 13-173 (676)
385 2y4i_B KSR2, HKSR2, kinase sup 99.5 4.6E-16 1.6E-20 149.6 -1.3 139 354-497 26-178 (319)
386 3a99_A Proto-oncogene serine/t 99.5 1.1E-15 3.9E-20 147.0 1.0 140 357-498 39-200 (320)
387 2r9u_A Variable lymphocyte rec 99.5 7.7E-14 2.6E-18 121.2 12.0 109 152-263 14-122 (174)
388 1z57_A Dual specificity protei 99.5 2.1E-15 7.2E-20 146.1 2.0 135 360-497 13-186 (339)
389 4azs_A Methyltransferase WBDD; 99.5 2.4E-15 8.3E-20 155.3 2.0 128 369-498 242-389 (569)
390 1q8y_A SR protein kinase; tran 99.5 2.3E-15 7.9E-20 148.1 0.8 137 360-497 18-187 (373)
391 2vx3_A Dual specificity tyrosi 99.5 4.2E-15 1.4E-19 146.7 2.3 137 358-497 51-210 (382)
392 3en9_A Glycoprotease, O-sialog 99.5 2E-14 6.7E-19 147.7 7.0 126 364-498 339-479 (540)
393 2eu9_A Dual specificity protei 99.5 4.1E-15 1.4E-19 145.1 1.8 135 360-497 18-191 (355)
394 3dzo_A Rhoptry kinase domain; 99.5 5.4E-15 1.8E-19 147.4 1.8 139 359-497 76-260 (413)
395 3fhr_A MAP kinase-activated pr 99.5 1.5E-14 5.2E-19 140.1 4.9 134 359-497 26-180 (336)
396 4fs7_A Uncharacterized protein 99.5 1.2E-12 4.2E-17 129.5 17.0 244 1-256 67-353 (394)
397 4fs7_A Uncharacterized protein 99.4 3.2E-12 1.1E-16 126.5 18.3 251 17-279 59-353 (394)
398 3un9_A NLR family member X1; l 99.4 1.5E-15 5.1E-20 148.6 -6.1 181 79-259 72-283 (372)
399 3un9_A NLR family member X1; l 99.4 5.5E-15 1.9E-19 144.6 -3.8 159 102-260 71-253 (372)
400 1zth_A RIO1 serine protein kin 99.4 4.6E-14 1.6E-18 131.1 2.3 131 362-498 48-219 (258)
401 2ifg_A High affinity nerve gro 99.4 8.5E-13 2.9E-17 128.3 10.0 103 131-235 12-116 (347)
402 4gt6_A Cell surface protein; l 99.4 3.6E-11 1.2E-15 118.9 20.9 247 1-257 59-368 (394)
403 2ifg_A High affinity nerve gro 99.4 9.8E-13 3.4E-17 127.9 8.8 131 153-286 11-145 (347)
404 4gt6_A Cell surface protein; l 99.3 9.1E-11 3.1E-15 116.0 20.6 131 25-159 58-191 (394)
405 4h09_A Hypothetical leucine ri 99.2 2E-09 6.8E-14 105.7 20.0 107 146-255 213-319 (379)
406 4gyi_A RIO2 kinase; protein ki 99.1 9E-12 3.1E-16 120.4 -0.4 142 354-496 88-263 (397)
407 2ra8_A Uncharacterized protein 99.1 2.2E-11 7.7E-16 118.0 2.2 154 99-257 168-341 (362)
408 2ra8_A Uncharacterized protein 99.0 9.2E-11 3.1E-15 113.7 3.2 159 100-260 136-321 (362)
409 4h09_A Hypothetical leucine ri 99.0 4.2E-08 1.4E-12 96.2 20.9 108 145-255 235-342 (379)
410 1io0_A Tropomodulin; LRR prote 98.6 4.2E-09 1.4E-13 92.1 0.8 87 173-259 64-164 (185)
411 1io0_A Tropomodulin; LRR prote 98.6 4E-09 1.4E-13 92.2 0.5 89 147-235 62-164 (185)
412 3rw6_A Nuclear RNA export fact 98.5 7.8E-09 2.7E-13 95.0 -1.5 79 76-156 167-257 (267)
413 3rw6_A Nuclear RNA export fact 98.4 3E-08 1E-12 91.1 0.7 57 194-252 192-257 (267)
414 3tm0_A Aminoglycoside 3'-phosp 98.3 3.6E-07 1.2E-11 84.6 4.4 88 356-446 9-97 (263)
415 3e4g_A ATP synthase subunit S, 98.3 2.7E-07 9.2E-12 78.6 2.1 85 149-233 60-150 (176)
416 3e4g_A ATP synthase subunit S, 98.2 2.7E-07 9.4E-12 78.6 1.6 84 174-257 61-150 (176)
417 1nd4_A Aminoglycoside 3'-phosp 98.1 1.3E-06 4.4E-11 80.5 3.3 83 360-447 19-103 (264)
418 1pgv_A TMD-1, tropomodulin TMD 97.7 8.9E-06 3E-10 70.6 1.8 88 171-258 67-169 (197)
419 1pgv_A TMD-1, tropomodulin TMD 97.6 9.1E-06 3.1E-10 70.5 0.7 62 173-234 97-169 (197)
420 3rfe_A Platelet glycoprotein I 97.3 0.00042 1.4E-08 56.1 6.3 38 30-67 30-67 (130)
421 3dxp_A Putative acyl-COA dehyd 97.3 0.00017 5.9E-09 69.7 4.5 80 366-446 43-128 (359)
422 3rfe_A Platelet glycoprotein I 97.2 0.00066 2.3E-08 54.9 6.9 56 202-259 12-68 (130)
423 3d1u_A Putative fructosamine-3 96.3 0.0024 8.3E-08 59.4 4.2 95 365-474 19-116 (288)
424 3r70_A Aminoglycoside phosphot 94.5 0.017 5.8E-07 54.5 2.9 73 362-446 38-114 (320)
425 3tdw_A Gentamicin resistance p 91.7 0.11 3.7E-06 48.5 3.7 74 366-446 24-100 (306)
426 3cxl_A N-chimerin; SH2, RHO-GA 91.0 0.027 9.2E-07 56.1 -1.4 60 365-427 146-214 (463)
427 3sg8_A APH(2'')-ID; antibiotic 89.9 0.05 1.7E-06 50.8 -0.5 75 366-446 25-103 (304)
428 2ks1_B Epidermal growth factor 89.6 0.29 9.9E-06 30.3 2.9 17 316-332 21-37 (44)
429 2l2t_A Receptor tyrosine-prote 86.9 0.47 1.6E-05 29.3 2.6 16 316-331 20-35 (44)
430 3f7w_A Putative fructosamine-3 85.8 1.4 4.8E-05 40.4 6.7 53 363-415 17-69 (288)
431 4gkh_A Aminoglycoside 3'-phosp 85.6 0.67 2.3E-05 42.0 4.3 71 369-444 32-105 (272)
432 3ovc_A Hygromycin-B 4-O-kinase 85.6 1 3.5E-05 42.9 5.8 99 365-472 45-145 (362)
433 2olc_A MTR kinase, methylthior 83.7 0.56 1.9E-05 45.4 3.0 74 366-443 35-119 (397)
434 3jr1_A Putative fructosamine-3 82.2 1.6 5.5E-05 40.6 5.4 95 366-475 41-138 (312)
435 2lz0_A Uncharacterized protein 81.4 4.2 0.00014 30.5 6.5 48 41-89 6-53 (100)
436 2jwa_A Receptor tyrosine-prote 80.9 0.93 3.2E-05 28.0 2.1 7 327-333 33-39 (44)
437 2lz0_A Uncharacterized protein 69.0 13 0.00044 27.7 6.2 48 65-113 6-53 (100)
438 3ats_A Putative uncharacterize 68.2 0.92 3.2E-05 43.0 -0.4 82 366-447 25-121 (357)
439 1nw1_A Choline kinase (49.2 KD 57.8 7.5 0.00026 37.9 3.9 96 367-473 79-183 (429)
440 2qg7_A Ethanolamine kinase PV0 57.2 8.7 0.0003 37.8 4.3 98 367-474 114-213 (458)
441 2k1k_A Ephrin type-A receptor 54.6 7 0.00024 23.3 1.9 8 310-317 14-21 (38)
442 2q83_A YTAA protein; 2635576, 53.3 6.5 0.00022 36.6 2.6 73 367-445 38-117 (346)
443 3feg_A Choline/ethanolamine ki 48.8 13 0.00046 35.4 4.0 97 367-473 56-161 (379)
444 2q83_A YTAA protein; 2635576, 47.6 4.9 0.00017 37.4 0.7 31 466-496 221-251 (346)
445 2ppq_A HSK, HK, homoserine kin 46.2 11 0.00038 34.7 3.0 62 351-415 7-73 (322)
446 2pyw_A Uncharacterized protein 43.4 7.5 0.00026 37.7 1.3 30 466-496 231-260 (420)
447 3csv_A Aminoglycoside phosphot 36.1 9.4 0.00032 35.5 0.7 30 467-496 183-216 (333)
448 2ppq_A HSK, HK, homoserine kin 35.9 9.1 0.00031 35.3 0.5 30 467-496 187-216 (322)
449 1nw1_A Choline kinase (49.2 KD 33.3 17 0.00059 35.3 2.1 31 465-495 247-305 (429)
450 3dxq_A Choline/ethanolamine ki 33.0 19 0.00066 32.7 2.3 29 466-495 172-200 (301)
451 2qg7_A Ethanolamine kinase PV0 30.6 21 0.00073 35.0 2.2 18 465-482 288-305 (458)
452 3ovc_A Hygromycin-B 4-O-kinase 30.1 13 0.00045 35.1 0.6 30 467-496 213-242 (362)
453 3i1a_A Spectinomycin phosphotr 30.1 17 0.00056 34.0 1.3 31 466-496 205-235 (339)
454 3c5i_A Choline kinase; choline 28.5 16 0.00054 34.5 0.9 71 367-444 39-119 (369)
455 3ats_A Putative uncharacterize 27.4 16 0.00053 34.3 0.6 31 466-496 221-251 (357)
456 3mes_A Choline kinase; malaria 27.2 37 0.0013 32.8 3.2 97 366-472 75-180 (424)
457 1zyl_A Hypothetical protein YI 26.7 25 0.00086 32.3 1.9 45 368-414 33-77 (328)
458 3f2s_A CK, chetk-alpha, cholin 26.0 30 0.001 33.2 2.3 31 465-495 242-278 (401)
459 2pyw_A Uncharacterized protein 25.3 29 0.00099 33.4 2.1 103 366-473 39-153 (420)
460 3c5i_A Choline kinase; choline 24.2 30 0.001 32.5 1.9 30 465-495 210-239 (369)
461 3feg_A Choline/ethanolamine ki 23.8 36 0.0012 32.3 2.4 31 465-495 218-252 (379)
462 3g15_A CK, chetk-alpha, cholin 23.0 35 0.0012 32.6 2.2 30 465-494 242-277 (401)
463 2knc_A Integrin alpha-IIB; tra 22.8 66 0.0022 20.8 2.6 14 306-319 12-25 (54)
464 1zyl_A Hypothetical protein YI 20.2 1.6E+02 0.0054 26.7 6.1 28 466-495 194-221 (328)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-39 Score=350.21 Aligned_cols=289 Identities=34% Similarity=0.584 Sum_probs=265.1
Q ss_pred CCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 4 CKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
+++|++|++++|.+++..|. .+..++ +|++|++++|.+++..|..|..+++|++|++++|.+++..|..+..+++|++
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~-~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPP-TLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp TCCCCEEECCSSEEEEECCG-GGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cCCccEEECCCCccccccCH-HHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 67899999999999888887 788888 8999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC-CCccccCCCCCcEEEcCCCcC
Q 010856 84 LGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS-VPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l 162 (499)
|++++|++++..|..+..+++|++|++++|++++..|..+..+++|++|++++|+++. +|..+..+++|+.|++++|.+
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 9999999998999999999999999999999999999999999999999999999985 888999999999999999988
Q ss_pred CCCCccc----------------------------------------------------------------------ccC
Q 010856 163 TSPLPLE----------------------------------------------------------------------IGN 172 (499)
Q Consensus 163 ~~~~~~~----------------------------------------------------------------------~~~ 172 (499)
++.+|.. +..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 7655533 344
Q ss_pred CCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEE
Q 010856 173 LKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLN 252 (499)
Q Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 252 (499)
+++|+.|++++|++++.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|||++|++++.+|..+..+++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccCCCCCCCCCccccccCCCcCCCCCCCCCCCCCCCCc
Q 010856 253 LSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNLQVPPCKTSI 297 (499)
Q Consensus 253 l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~~~~~~~~~~~~~ 297 (499)
+++|+++|.+|....+..+....+.|||.+||.|. ++|....
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCc
Confidence 99999999999998899999999999999999753 3776533
No 2
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-37 Score=315.74 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=121.6
Q ss_pred CCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeC
Q 010856 150 KDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNL 229 (499)
Q Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 229 (499)
++|++|++++|.+++..+..+..+++|+.|++++|++++..+..|.++++|++|++++|.+++..+..|..+++|+.|++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 46677777777777777788889999999999999999888889999999999999999999888899999999999999
Q ss_pred CCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCCC
Q 010856 230 SNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 230 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
++|++++..|..|..+++|++|++++|++++..+.. ..++.++.+++.+|++.|+|+.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999888999999999999999999999766544 4678899999999999998874
No 3
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-37 Score=311.60 Aligned_cols=281 Identities=23% Similarity=0.274 Sum_probs=219.8
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++++.|+|++|++++..+. .+..++ +|++|+|++|.++++.|.+|.++++|++|+|++|.++...+..|.++++|++|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~-~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 109 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQD-EFASFP-HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 109 (477)
T ss_dssp TTCSEEECCSSCCCEECTT-TTTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEE
T ss_pred CCCcEEECCCCccceECHh-HccCCC-CCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEE
Confidence 4677888888888777665 667777 78888888888877777778888888888888888776666667777888888
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcCCCcCC
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFSSNFLT 163 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~ 163 (499)
+|++|.+....+..|..+++|++|++++|.+++..+..|..+++|+.|++++|+++.++. .+..+++|+.|++++|.+.
T Consensus 110 ~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 189 (477)
T 2id5_A 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN 189 (477)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC
T ss_pred ECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc
Confidence 888888777777777777788888888887777777777777777777777777777654 4666777777777777766
Q ss_pred CCCcccccCCC------------------------CccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCcccc
Q 010856 164 SPLPLEIGNLK------------------------VLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFG 219 (499)
Q Consensus 164 ~~~~~~~~~l~------------------------~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~ 219 (499)
+..+..|..++ +|+.|++++|+++...+..+..+++|++|+|++|.+++..+..|.
T Consensus 190 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (477)
T 2id5_A 190 AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 269 (477)
T ss_dssp EECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCT
T ss_pred EeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcc
Confidence 65555555544 455555666667665556788899999999999999988888899
Q ss_pred CCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCCC
Q 010856 220 DLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 220 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
.+++|+.|++++|++++..+..|..+++|+.|++++|++++..+.. ..+++++.+++.+|||.|+|..
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 9999999999999999888999999999999999999999766543 4567889999999999998854
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3e-37 Score=297.22 Aligned_cols=254 Identities=32% Similarity=0.552 Sum_probs=240.5
Q ss_pred cccEEEcccCCCcc--cCCccccCCCCCCEEeccC-CcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEE
Q 010856 32 SLEDFRMYNCNISG--GIPEEISNLTNSTIVNLGG-NKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRL 108 (499)
Q Consensus 32 ~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 108 (499)
++++|+|++|.+++ .+|..|.++++|++|++++ |.+.+..|..|.++++|++|+|++|.+++..|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 79999999999998 8899999999999999995 99998999999999999999999999998999999999999999
Q ss_pred eeecCCCCCcCCccccCCccCCeeeccccCCC-CCCccccCCC-CCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcc
Q 010856 109 DLDGNKLSGSLPACFSNLTSLRIVSLGSNKLT-SVPLTFWNLK-DILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNF 186 (499)
Q Consensus 109 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 186 (499)
++++|.+++..|..+..+++|++|++++|+++ .+|..+..++ +|++|++++|.+++..|..+..++ |+.|++++|.+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 99999999999999999999999999999999 5899999998 999999999999988899999887 99999999999
Q ss_pred cccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCC
Q 010856 187 SGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGG 266 (499)
Q Consensus 187 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 266 (499)
++..|..|..+++|+.|++++|.+++..+. +..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999966655 8889999999999999999999999999999999999999999999988
Q ss_pred CCCCccccccCCCcCCCCCCC
Q 010856 267 SFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 267 ~~~~l~~~~l~~N~~~c~~~~ 287 (499)
.++.+..+++.+|+++|+.|.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cccccChHHhcCCCCccCCCC
Confidence 899999999999999998753
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-35 Score=319.26 Aligned_cols=251 Identities=35% Similarity=0.557 Sum_probs=215.2
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+|++|++++|.+++..|..|.++++|++|++++|.+++..|..+..+++|+.|++++|.+.+..|..+..+++|++|+++
T Consensus 395 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 474 (768)
T 3rgz_A 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474 (768)
T ss_dssp CCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEec
Confidence 67777888887777888888888888888888888888888888888888888888888888888888888889999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCC-CCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccC
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTS-VPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVI 190 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (499)
+|++++..|..+..+++|+.|++++|+++. +|..+..+++|++|++++|.+++..|..+..+++|+.|++++|++++.+
T Consensus 475 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~i 554 (768)
T 3rgz_A 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBC
T ss_pred CCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcC
Confidence 999888888888888899999999998885 7888888899999999999988888888888999999999998887655
Q ss_pred ccc----------------------------------------------------------------------ccCCcCC
Q 010856 191 PTE----------------------------------------------------------------------IGGLKNL 200 (499)
Q Consensus 191 ~~~----------------------------------------------------------------------l~~l~~L 200 (499)
|.. +..+++|
T Consensus 555 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L 634 (768)
T 3rgz_A 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634 (768)
T ss_dssp CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC
T ss_pred ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccc
Confidence 543 2335678
Q ss_pred ceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCC
Q 010856 201 EYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGN 279 (499)
Q Consensus 201 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N 279 (499)
+.|++++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|||++|+++|.+|.. ..++.++.+++++|
T Consensus 635 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 88999999999999999999999999999999999999999999999999999999999888875 45677888999988
Q ss_pred cCC
Q 010856 280 ELL 282 (499)
Q Consensus 280 ~~~ 282 (499)
+..
T Consensus 715 ~l~ 717 (768)
T 3rgz_A 715 NLS 717 (768)
T ss_dssp EEE
T ss_pred ccc
Confidence 854
No 6
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=302.09 Aligned_cols=284 Identities=21% Similarity=0.228 Sum_probs=231.3
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQK 80 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 80 (499)
|.++++|++|+|++|.+++..|. .+.+++ +|++|+|++|.++.+.+..|.++++|++|+|++|.+++..+..|.++++
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 129 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPG-AFNNLF-NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYN 129 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTT-TTTTCT-TCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCCCCEEECCCCccCEeChh-hhhCCc-cCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcccccc
Confidence 45788888888888888887776 777777 8888888888888777777888888888888888888777778888888
Q ss_pred CCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCC----------
Q 010856 81 LQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNL---------- 149 (499)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l---------- 149 (499)
|++|++++|.+++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+..++. .+..+
T Consensus 130 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 130 LKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209 (477)
T ss_dssp CCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEEC
T ss_pred CCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCC
Confidence 8888888888887777778888888888888888876666667777777777777776665332 33333
Q ss_pred --------------CCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCC
Q 010856 150 --------------KDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIP 215 (499)
Q Consensus 150 --------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 215 (499)
.+|++|++++|.++.+.+..+..+++|+.|++++|.+++..+..|..+++|++|+|++|++++..+
T Consensus 210 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (477)
T 2id5_A 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289 (477)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT
T ss_pred CccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH
Confidence 366677777777877666778999999999999999999888899999999999999999999999
Q ss_pred ccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCCC
Q 010856 216 DSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 216 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~~ 286 (499)
..|..+++|+.|++++|++++..+..|..+++|+.|++++|++.+..+..+.+.......+.++...|..|
T Consensus 290 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 290 YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp TTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred HHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 99999999999999999999988889999999999999999999765543333334446677788888664
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.7e-35 Score=306.62 Aligned_cols=283 Identities=22% Similarity=0.263 Sum_probs=249.3
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCC-ccccCCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIP-ITLSKLQ 79 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~ 79 (499)
|+++++|++|++++|.++.. |. .+..++ +|++|++++|.+++..|..+..+++|++|++++|.+.+..+ ..+..++
T Consensus 274 ~~~l~~L~~L~l~~n~l~~l-p~-~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLSEL-PS-GLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTCTTCSEEECTTSCCSCC-CS-SCCSCT-TCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred hccccCCCEEeccCCccCCC-Ch-hhcccc-cCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 45688999999999999844 44 567777 89999999999998888889999999999999998875444 4588999
Q ss_pred CCCeEecccccccccC--CccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCC-C-ccccCCCCCcEE
Q 010856 80 KLQGLGLEDNKLEGSI--PDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSV-P-LTFWNLKDILNL 155 (499)
Q Consensus 80 ~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~~l~~L~~L 155 (499)
+|++|++++|.+++.. +..+..+++|++|++++|++.+..+..|..+++|+.|++++|+++.. + ..+..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999998765 67889999999999999999988889999999999999999999874 3 348889999999
Q ss_pred EcCCCcCCCCCcccccCCCCccEEEccCCccccc---CcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCC
Q 010856 156 NFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGV---IPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNN 232 (499)
Q Consensus 156 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N 232 (499)
++++|.+++..+..+..+++|+.|++++|++++. .+..+..+++|++|++++|++++..|..|..+++|+.|++++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 9999999988888999999999999999999863 3356889999999999999999998999999999999999999
Q ss_pred cCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCCC
Q 010856 233 NLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 233 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
++++..|..+..+++| .|++++|++++.+|.. ..++.++.+++.+|||.|+|+.
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9999999999999999 9999999999877754 4467889999999999998853
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.1e-34 Score=302.01 Aligned_cols=141 Identities=23% Similarity=0.246 Sum_probs=98.5
Q ss_pred CCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccc-cCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCE
Q 010856 148 NLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSG-VIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKF 226 (499)
Q Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 226 (499)
.+++|++|++++|.+++..+..+..+++|+.|++++|.+++ ..|..+..+++|++|++++|++++..|..|..+++|+.
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 34444444444444444445555666666666666666665 35666777777778888888777777777888888888
Q ss_pred EeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCC-CccccccCCCcCCCCCCCC
Q 010856 227 LNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFG-NFSAESFEGNELLCGSPNL 288 (499)
Q Consensus 227 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~l~~~~l~~N~~~c~~~~~ 288 (499)
|++++|++++..|..+..+++|+.|++++|++++..+....++ +++.+++.+|||.|+|+..
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 8888888887777888888888888888888875444434454 4788888888888888643
No 9
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-34 Score=294.92 Aligned_cols=264 Identities=22% Similarity=0.267 Sum_probs=219.9
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCc--cccCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPI--TLSKL 78 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l 78 (499)
|+++++|++|+|++|.+.+..+...+..++ +|++|+|++|.+++..|..|.++++|++|++++|.+++..+. .|..+
T Consensus 50 ~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 128 (455)
T 3v47_A 50 FSRLQDLQFLKVEQQTPGLVIRNNTFRGLS-SLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL 128 (455)
T ss_dssp TSSCTTCCEEECCCCSTTCEECTTTTTTCT-TCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTC
T ss_pred hccCccccEEECcCCcccceECcccccccc-cCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCc
Confidence 467888888888888887554444677777 888888888888888888888888888888888888764443 37888
Q ss_pred CCCCeEecccccccccCCcc-ccCcccccEEeeecCCCCCcCCccccCC-------------------------------
Q 010856 79 QKLQGLGLEDNKLEGSIPDD-ICHLAELYRLDLDGNKLSGSLPACFSNL------------------------------- 126 (499)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l------------------------------- 126 (499)
++|++|+|++|.+++..|.. +..+++|++|++++|++++..+..+..+
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~ 208 (455)
T 3v47_A 129 TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208 (455)
T ss_dssp TTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCT
T ss_pred ccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccc
Confidence 88888888888888776665 7788888888888888876665544332
Q ss_pred ---ccCCee---------------------------------------------------------------eccccCCC
Q 010856 127 ---TSLRIV---------------------------------------------------------------SLGSNKLT 140 (499)
Q Consensus 127 ---~~L~~L---------------------------------------------------------------~L~~n~l~ 140 (499)
++|+.| ++++|+++
T Consensus 209 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 288 (455)
T 3v47_A 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF 288 (455)
T ss_dssp TTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCC
T ss_pred cccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccc
Confidence 344444 44444444
Q ss_pred C-CCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCcccc
Q 010856 141 S-VPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFG 219 (499)
Q Consensus 141 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~ 219 (499)
. .|..+..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..|..|.
T Consensus 289 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 289 ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 4 355688899999999999999998899999999999999999999998899999999999999999999998899999
Q ss_pred CCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC
Q 010856 220 DLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG 265 (499)
Q Consensus 220 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 265 (499)
.+++|++|++++|++++..+..+..+++|+.|++++|++++.+|..
T Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999999999999999888888999999999999999999988854
No 10
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-34 Score=286.92 Aligned_cols=274 Identities=21% Similarity=0.230 Sum_probs=173.7
Q ss_pred CCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 4 CKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
+++++.|++++|.++.+.+. .+..++ +|++|++++|.++++.+.+|..+++|++|+|++|.+++..|..|.++++|++
T Consensus 44 l~~l~~l~l~~~~l~~l~~~-~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAA-LLDSFR-QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GCCCSEEEEESCEESEECTH-HHHHCC-CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCceEEEecCCchhhCChh-Hhcccc-cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 35555666666655544333 444555 5666666666665555555566666666666666665555555555666666
Q ss_pred EecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCcc-c----------------
Q 010856 84 LGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT-F---------------- 146 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~---------------- 146 (499)
|++++|+++...+..|..+++|++|++++|++++..+..+..+++|+.|++++|+++.++.. +
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc
Confidence 66666665544434445556666666666666555555555555666666665555543210 0
Q ss_pred ---------------------cCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeC
Q 010856 147 ---------------------WNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFL 205 (499)
Q Consensus 147 ---------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 205 (499)
...++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|++|++
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 1124566666666666643 45677778888888888887777777888888888888
Q ss_pred cCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCC
Q 010856 206 GYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 206 ~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~ 285 (499)
++|++++ .+..+..+++|+.|++++|+++ ..|..+..+++|+.|++++|++++.. ...++.++.+++.+|++.|.+
T Consensus 280 ~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 280 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp CSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccchh
Confidence 8888874 3455567788888888888887 34555677788888888888887543 345677888888888887754
No 11
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-35 Score=283.55 Aligned_cols=250 Identities=30% Similarity=0.436 Sum_probs=234.5
Q ss_pred CCCCEEECcCCCCCc--cCChhccccccccccEEEccc-CCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCC
Q 010856 5 KSLTLIYLSNNPLDG--ILPKTSVGNLSHSLEDFRMYN-CNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKL 81 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~--~~~~~~~~~l~~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 81 (499)
.+++.|+|++|.+++ ..|. .+..++ +|++|++++ |.+.+.+|..|.++++|++|+|++|.+++..|..|.++++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~-~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPS-SLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG-GGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred ceEEEEECCCCCccCCcccCh-hHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 579999999999998 7787 888898 999999995 99999999999999999999999999998999999999999
Q ss_pred CeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCc-cCCeeeccccCCCC-CCccccCCCCCcEEEcCC
Q 010856 82 QGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLT-SLRIVSLGSNKLTS-VPLTFWNLKDILNLNFSS 159 (499)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~ 159 (499)
++|++++|.+++..|..+..+++|++|++++|++++..|..+..++ +|+.|++++|+++. +|..+..++ |++|++++
T Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 9999999999999999999999999999999999988999999998 99999999999995 888888887 99999999
Q ss_pred CcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCc
Q 010856 160 NFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIP 239 (499)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 239 (499)
|.+++..+..+..+++|+.|++++|.+++..+. +..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999998999999999999999999999976665 8889999999999999999999999999999999999999998888
Q ss_pred ccccCCCCCCEEEccCCcCc
Q 010856 240 ASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 240 ~~~~~l~~L~~L~l~~N~l~ 259 (499)
.. ..+++|+.+++++|+..
T Consensus 286 ~~-~~l~~L~~l~l~~N~~l 304 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNKCL 304 (313)
T ss_dssp CS-TTGGGSCGGGTCSSSEE
T ss_pred CC-ccccccChHHhcCCCCc
Confidence 76 88999999999999943
No 12
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.9e-34 Score=303.38 Aligned_cols=289 Identities=23% Similarity=0.242 Sum_probs=238.0
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCc--ccCCccccCC--CCCCEEeccCCcCCccCCccccC
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNIS--GGIPEEISNL--TNSTIVNLGGNKLNGSIPITLSK 77 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~--~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~ 77 (499)
+.+++|++|++++|.+++..+. .+..++ +|++|++++|.+. ...+..|..+ ++|+.|++++|++++..|..|..
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~-~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSN-MFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTT-TTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred ccCCCCCEEECCCCccCCCChh-Hhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 3466677777777777665554 566666 6777777776533 2223334332 46777777888888888888999
Q ss_pred CCCCCeEecccccccccCC-ccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCC---CCCccccCCCCCc
Q 010856 78 LQKLQGLGLEDNKLEGSIP-DDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLT---SVPLTFWNLKDIL 153 (499)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~l~~L~ 153 (499)
+++|+.|++++|.+.+.++ ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ .+|..+..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 9999999999999976554 67889999999999999999888889999999999999999886 3688899999999
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc--------ccccCCcCCceeeCcCCcCCCCCCccccCCCCCC
Q 010856 154 NLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP--------TEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLK 225 (499)
Q Consensus 154 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--------~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 225 (499)
.|++++|.++++.+..|.++++|+.|++++|++++..+ ..|.++++|++|++++|+++.+.+..|..+++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 99999999999888889999999999999999986532 2378899999999999999977777899999999
Q ss_pred EEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCC--CCCCccccccCCCcCCCCCCC-CCCCC
Q 010856 226 FLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGG--SFGNFSAESFEGNELLCGSPN-LQVPP 292 (499)
Q Consensus 226 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~l~~~~l~~N~~~c~~~~-~~~~~ 292 (499)
.|++++|++++..+..|..+++|+.|++++|++++..+... .+++++.+++.+|||.|+|+. .++..
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~ 633 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVN 633 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEEC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHH
Confidence 99999999998888889999999999999999998766532 467899999999999999974 44433
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=309.84 Aligned_cols=272 Identities=23% Similarity=0.235 Sum_probs=233.0
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|++++|.+.+..+. .+..++ +|+.|+|++|.+++..|.+|..+++|++|+|++|.+++..+..|..+++|+.|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~-~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSR-VFETLK-DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp SCCCEEECTTCCCCEECSC-CSSSCC-CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred CCccEEECCCCcccccChh-hhhcCC-CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 7899999999999988776 788888 89999999999999999999999999999999999998889999999999999
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCcc-------------------
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT------------------- 145 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------------------- 145 (499)
++++|.+....+..|..+++|++|++++|.+++.. .+++|+.|++++|+++.+|..
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~ 418 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDI 418 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTT
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcccccccccccceeecccCccccCch
Confidence 99999999888888999999999999999988532 255666666666666554432
Q ss_pred ---ccCCCCCcEEEcCCCcCCCCCcc-cccCCCCccEEEccCCccc-----ccCcccccCCcCCceeeCcCCcCCCCCCc
Q 010856 146 ---FWNLKDILNLNFSSNFLTSPLPL-EIGNLKVLIGIDFSMNNFS-----GVIPTEIGGLKNLEYLFLGYNRLQGSIPD 216 (499)
Q Consensus 146 ---~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~-----~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 216 (499)
+..+++|+.|++++|++++..+. .+..+++|+.|++++|.++ +..+..|.++++|+.|+|++|++++..+.
T Consensus 419 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 498 (844)
T 3j0a_A 419 LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG 498 (844)
T ss_dssp HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT
T ss_pred hhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh
Confidence 34788899999999988865433 4566788999999999987 34456688999999999999999999999
Q ss_pred cccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCCCC
Q 010856 217 SFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 217 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
.|..+++|+.|+|++|++++..+..+. ++|+.|++++|++++..|.. ++.+..+++.+|||.|+|+.
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 499 VFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred HccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 999999999999999999988777776 89999999999999988865 67899999999999998863
No 14
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.1e-34 Score=298.51 Aligned_cols=271 Identities=21% Similarity=0.230 Sum_probs=174.8
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++++.|++++|.+..+++. .+..++ +|++|+|++|.++++.|..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAA-LLDSFR-QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp CCCSEEEESSCEESEECTH-HHHHCC-CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCCCCCcCHH-HHccCC-CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 3444444444444443332 334444 44444444444444444444444444444444444444444444444444444
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCC---------------------
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP--------------------- 143 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--------------------- 143 (499)
+|++|.++...+..|..+++|++|+|++|.+++..|..|..+++|+.|++++|.++.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 44444444333333444444444444444444444444444444444444444444322
Q ss_pred -------------------ccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceee
Q 010856 144 -------------------LTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLF 204 (499)
Q Consensus 144 -------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (499)
..+ .++|+.|++++|.+++ +..+..+++|+.|++++|.+++..|..|..+++|+.|+
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 284 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 284 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEE
Confidence 111 2467777777777775 35678899999999999999998899999999999999
Q ss_pred CcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCC
Q 010856 205 LGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCG 284 (499)
Q Consensus 205 L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~ 284 (499)
|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++.. ...++.+..+++.+|+|.|.
T Consensus 285 Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 285 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 99999986 4666778999999999999999 56677888999999999999998653 44578899999999999997
Q ss_pred C
Q 010856 285 S 285 (499)
Q Consensus 285 ~ 285 (499)
+
T Consensus 361 ~ 361 (597)
T 3oja_B 361 S 361 (597)
T ss_dssp H
T ss_pred h
Confidence 6
No 15
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.8e-33 Score=295.14 Aligned_cols=118 Identities=25% Similarity=0.361 Sum_probs=101.7
Q ss_pred ccCCCCccEEEccCCcc-cccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCC
Q 010856 170 IGNLKVLIGIDFSMNNF-SGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYL 248 (499)
Q Consensus 170 ~~~l~~L~~L~l~~n~l-~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 248 (499)
+..++.|+.|++++|.+ ....|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|
T Consensus 465 ~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 34456677777777764 34567788899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEccCCcCcccCCCCC-CC-CCccccccCCCcCCCCCCC
Q 010856 249 ENLNLSFNKLEGEIPRGG-SF-GNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 249 ~~L~l~~N~l~~~~~~~~-~~-~~l~~~~l~~N~~~c~~~~ 287 (499)
+.|++++|+|++..|... .+ ++++.+++++|||.|+|..
T Consensus 545 ~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 999999999999888753 34 5789999999999999853
No 16
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7e-33 Score=269.10 Aligned_cols=268 Identities=23% Similarity=0.296 Sum_probs=234.0
Q ss_pred CCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEe
Q 010856 6 SLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLG 85 (499)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 85 (499)
+++.++++++.++.+... ++++|++|++++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 32 ~l~~l~~~~~~l~~lp~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKD-----LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp ETTEEECTTSCCCSCCCS-----CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCeEEEecCCCccccCcc-----CCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 789999999999865332 234899999999999988888999999999999999999988899999999999999
Q ss_pred cccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC---CCccccCCCCCcEEEcCCCcC
Q 010856 86 LEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS---VPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~~~~~l~~L~~L~l~~n~l 162 (499)
+++|.++. +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|.++. .+..+..+++|++|++++|.+
T Consensus 107 Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 99999984 444443 799999999999998888889999999999999999974 466788999999999999999
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
+.+ |..+. ++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|+++ ..|..+
T Consensus 184 ~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 TTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred ccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 864 33332 89999999999999988999999999999999999999888889999999999999999999 677789
Q ss_pred cCCCCCCEEEccCCcCcccCCCCC-------CCCCccccccCCCcCCCCC
Q 010856 243 EKLSYLENLNLSFNKLEGEIPRGG-------SFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 243 ~~l~~L~~L~l~~N~l~~~~~~~~-------~~~~l~~~~l~~N~~~c~~ 285 (499)
..+++|+.|++++|++++..+... ..+.+..+++.+||+.+..
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGG
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccc
Confidence 999999999999999997654432 2356778899999987643
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=293.89 Aligned_cols=142 Identities=27% Similarity=0.348 Sum_probs=104.7
Q ss_pred ccCCCCCcEEEcCCCcCCCCCc-ccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCC-CCCCccccCCCC
Q 010856 146 FWNLKDILNLNFSSNFLTSPLP-LEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQ-GSIPDSFGDLIS 223 (499)
Q Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~ 223 (499)
+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+.++++|++|++++|.++ +..|..+..+++
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 3344555555555555554433 35666777777777777777777777777888888888888876 456777888888
Q ss_pred CCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCCC
Q 010856 224 LKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 224 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
|+.|++++|++++..|..+..+++|+.|++++|++++..|.. ..++.++.+++.+|++.|.|+.
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 888888888888777888888888888888888888776653 4567788888888888888764
No 18
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.7e-33 Score=290.05 Aligned_cols=139 Identities=22% Similarity=0.246 Sum_probs=80.0
Q ss_pred cCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccC--cccccCCcCCceeeCcCCcCCC-CCCccccCCCC
Q 010856 147 WNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVI--PTEIGGLKNLEYLFLGYNRLQG-SIPDSFGDLIS 223 (499)
Q Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~ 223 (499)
..+++|++|++++|.+++..|..+..+++|+.|++++|++++.. |..+..+++|++|++++|++++ ..+..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 45567777777777777666666777777777777777776532 3456666777777777777665 33333555555
Q ss_pred CCEEeCCCCcCCccC---------------------cccccCCCCCCEEEccCCcCcccCCC-CCCCCCccccccCCCcC
Q 010856 224 LKFLNLSNNNLSGAI---------------------PASLEKLSYLENLNLSFNKLEGEIPR-GGSFGNFSAESFEGNEL 281 (499)
Q Consensus 224 L~~L~l~~N~l~~~~---------------------~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~~~l~~N~~ 281 (499)
|+.|++++|++++.. |..+..+++|+.|++++|++++..+. ...++.++.+++++|||
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCB
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCc
Confidence 555555555444333 33333555555555555555533332 23445555555666665
Q ss_pred CCCC
Q 010856 282 LCGS 285 (499)
Q Consensus 282 ~c~~ 285 (499)
.|+|
T Consensus 510 ~c~c 513 (562)
T 3a79_B 510 DCTC 513 (562)
T ss_dssp CCCH
T ss_pred CCCc
Confidence 5554
No 19
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8.7e-33 Score=268.64 Aligned_cols=266 Identities=24% Similarity=0.269 Sum_probs=231.7
Q ss_pred CCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEe
Q 010856 6 SLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLG 85 (499)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 85 (499)
+++.++++++.++.++.. + +++|++|++++|.+++..+.+|.++++|++|++++|.+++..|..|.++++|++|+
T Consensus 34 ~l~~l~~~~~~l~~ip~~--~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKE--I---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp ETTEEECCSSCCSSCCSC--C---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cCCEEECCCCCccccCCC--C---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 699999999999855432 2 34899999999999988888999999999999999999988899999999999999
Q ss_pred cccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC---CCccccCCCCCcEEEcCCCcC
Q 010856 86 LEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS---VPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~~~~~l~~L~~L~l~~n~l 162 (499)
+++|.++. +|..+. ++|++|++++|+++...+..|..+++|+.|++++|.++. .+..+..+ +|++|++++|.+
T Consensus 109 L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 99999984 444443 899999999999998888889999999999999999974 45566666 999999999999
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
+++ |..+. ++|+.|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|..+
T Consensus 185 ~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TGI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SSC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Ccc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 874 43333 78999999999999988889999999999999999999888889999999999999999999 677789
Q ss_pred cCCCCCCEEEccCCcCcccCCCCC-------CCCCccccccCCCcCCCC
Q 010856 243 EKLSYLENLNLSFNKLEGEIPRGG-------SFGNFSAESFEGNELLCG 284 (499)
Q Consensus 243 ~~l~~L~~L~l~~N~l~~~~~~~~-------~~~~l~~~~l~~N~~~c~ 284 (499)
..+++|+.|++++|++++..+... ..+.+..+++.+||+.+.
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 999999999999999997654431 145678899999998753
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.3e-33 Score=287.10 Aligned_cols=132 Identities=23% Similarity=0.235 Sum_probs=80.4
Q ss_pred cCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccc--cCcccccCCcCCceeeCcCCcCCCCCC-ccccCCCC
Q 010856 147 WNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSG--VIPTEIGGLKNLEYLFLGYNRLQGSIP-DSFGDLIS 223 (499)
Q Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~ 223 (499)
..+++|++|++++|.+++..|..+..+++|+.|++++|++++ ..|..+..+++|++|++++|.+++..| ..+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 456778888888888877777777778888888888888775 334567777777777777777776333 33556666
Q ss_pred CCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 224 LKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 224 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
|+.|++++|++++..+..+. ++|+.|++++|+++...+....++.++.+++++|.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~ 455 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQ 455 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCc
Confidence 66666666665544443332 34555555555554222222234444444444444
No 21
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.1e-32 Score=264.55 Aligned_cols=267 Identities=20% Similarity=0.247 Sum_probs=221.7
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|+.|+|++|++++..+. .+..++ +|++|++++|.++++.|.+|..+++|++|++++|.++.. |..+. ++|++|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~--~~L~~L 126 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDG-DFKNLK-NLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL-PEKMP--KTLQEL 126 (330)
T ss_dssp TTCCEEECCSSCCCCBCTT-TTTTCT-TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC-CSSCC--TTCCEE
T ss_pred CCCeEEECCCCcCCEeChh-hhccCC-CCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCcc-Chhhc--ccccEE
Confidence 5789999999999987765 678888 899999999999988888999999999999999999844 44333 789999
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCC--cCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcC
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSG--SLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l 162 (499)
++++|.+++..+..|..+++|++|++++|.+.. ..+..+..+++|+.|++++|+++.+|..+. ++|++|++++|.+
T Consensus 127 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 127 RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp ECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCC
T ss_pred ECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcC
Confidence 999999988777788999999999999999864 667788889999999999999998887654 8899999999999
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
++..+..+..+++|+.|++++|.+++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 9888888999999999999999999888888899999999999999998 667788899999999999999998777777
Q ss_pred cC------CCCCCEEEccCCcCccc--CCC-CCCCCCccccccCCC
Q 010856 243 EK------LSYLENLNLSFNKLEGE--IPR-GGSFGNFSAESFEGN 279 (499)
Q Consensus 243 ~~------l~~L~~L~l~~N~l~~~--~~~-~~~~~~l~~~~l~~N 279 (499)
.. .+.++.+++++|++... .|. ......++.+++++|
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 54 37888999999998742 222 123455667777766
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.6e-34 Score=299.09 Aligned_cols=276 Identities=24% Similarity=0.362 Sum_probs=224.9
Q ss_pred CCCCCCCCEEECcCCCCCcc-----------------CChhccc--cccccccEEEcccCCCcccCCccccCCCCCCEEe
Q 010856 1 MSNCKSLTLIYLSNNPLDGI-----------------LPKTSVG--NLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVN 61 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~-----------------~~~~~~~--~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 61 (499)
|+++++|++|+|++|.+++. .|. .+. +++ +|++|++++|.+.+.+|..|.++++|++|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 279 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLK-DLTDVEVYNCPNLTKLPTFLKALPEMQLIN 279 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCT-TCCEEEEECCTTCSSCCTTTTTCSSCCEEE
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccC-CCCEEEecCCcCCccChHHHhcCCCCCEEE
Confidence 35788999999999999984 565 666 888 899999999999999999999999999999
Q ss_pred ccCCc-CCc-cCCccccCC------CCCCeEecccccccccCCc--cccCcccccEEeeecCCCCCcCCccccCCccCCe
Q 010856 62 LGGNK-LNG-SIPITLSKL------QKLQGLGLEDNKLEGSIPD--DICHLAELYRLDLDGNKLSGSLPACFSNLTSLRI 131 (499)
Q Consensus 62 L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 131 (499)
+++|+ +++ ..|..+..+ ++|++|++++|+++ .+|. .+..+++|++|++++|++++.+| .+..+++|+.
T Consensus 280 Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~ 357 (636)
T 4eco_A 280 VACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLAS 357 (636)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESE
T ss_pred CcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCE
Confidence 99998 887 677777665 89999999999998 6777 88999999999999999997777 8888889999
Q ss_pred eeccccCCCCCCccccCCCC-CcEEEcCCCcCCCCCcccccCCC--CccEEEccCCcccccCccccc-------CCcCCc
Q 010856 132 VSLGSNKLTSVPLTFWNLKD-ILNLNFSSNFLTSPLPLEIGNLK--VLIGIDFSMNNFSGVIPTEIG-------GLKNLE 201 (499)
Q Consensus 132 L~L~~n~l~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~l~-------~l~~L~ 201 (499)
|++++|+++.+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|.+++..|..+. .+++|+
T Consensus 358 L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~ 436 (636)
T 4eco_A 358 LNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS 436 (636)
T ss_dssp EECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEE
T ss_pred EECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCC
Confidence 99999988888888888888 999999999888 4666666654 788888888888888887777 777888
Q ss_pred eeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCC-------CCCEEEccCCcCcccCCCC-C--CCCCc
Q 010856 202 YLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLS-------YLENLNLSFNKLEGEIPRG-G--SFGNF 271 (499)
Q Consensus 202 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~-------~L~~L~l~~N~l~~~~~~~-~--~~~~l 271 (499)
+|++++|.+++..+..+..+++|+.|++++|+++...+..+.... +|+.|++++|+++. +|.. . .++.+
T Consensus 437 ~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L 515 (636)
T 4eco_A 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYL 515 (636)
T ss_dssp EEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTC
T ss_pred EEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCc
Confidence 888888888866555667788888888888888855444444333 78888888888884 4433 3 56778
Q ss_pred cccccCCCcCC
Q 010856 272 SAESFEGNELL 282 (499)
Q Consensus 272 ~~~~l~~N~~~ 282 (499)
+.+++++|...
T Consensus 516 ~~L~Ls~N~l~ 526 (636)
T 4eco_A 516 VGIDLSYNSFS 526 (636)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCCCC
Confidence 88888888743
No 23
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-32 Score=287.78 Aligned_cols=278 Identities=18% Similarity=0.181 Sum_probs=190.2
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQK 80 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 80 (499)
|+++++|++|+|++|.++++.|. .+..++ +|++|++++|.+++..|.+|.++++|++|++++|.+++..+..|.++++
T Consensus 53 ~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~ 130 (606)
T 3t6q_A 53 FSRLINLTFLDLTRCQIYWIHED-TFQSQH-RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKT 130 (606)
T ss_dssp STTCTTCSEEECTTCCCCEECTT-TTTTCT-TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTT
T ss_pred hccCccceEEECCCCccceeChh-hccCcc-ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCc
Confidence 46788888888888888887776 777777 8888888888888888888888888888888888888766777788888
Q ss_pred CCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCC--eeeccccCC-------------------
Q 010856 81 LQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLR--IVSLGSNKL------------------- 139 (499)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l------------------- 139 (499)
|++|++++|.+++.....+..+++|++|++++|.+++..+..|..+++|+ .|++++|++
T Consensus 131 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 210 (606)
T 3t6q_A 131 LESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFG 210 (606)
T ss_dssp CCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECT
T ss_pred ccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccC
Confidence 88888888887765444445577777777777776655555454444444 444444433
Q ss_pred --------------------------------------------------------CCCCc-cccCCCCCcEEEcCCCcC
Q 010856 140 --------------------------------------------------------TSVPL-TFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 140 --------------------------------------------------------~~~~~-~~~~l~~L~~L~l~~n~l 162 (499)
+.++. .+..+++|++|++++|.+
T Consensus 211 ~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 290 (606)
T 3t6q_A 211 GTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL 290 (606)
T ss_dssp TCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCC
T ss_pred CchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCcc
Confidence 33222 255567777777777777
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCC-CccccCCCCCCEEeCCCCcCCccC--c
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSI-PDSFGDLISLKFLNLSNNNLSGAI--P 239 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~l~~N~l~~~~--~ 239 (499)
+. +|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.. +..+..+++|+.|++++|++++.. +
T Consensus 291 ~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 369 (606)
T 3t6q_A 291 SE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCN 369 (606)
T ss_dssp SC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEEST
T ss_pred CC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcc
Confidence 63 5556677777777777777777666666777777777777777666433 334666677777777777666544 5
Q ss_pred ccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcC
Q 010856 240 ASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNEL 281 (499)
Q Consensus 240 ~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~ 281 (499)
..+..+++|+.|++++|++++..|.. ...+.++.+++.+|..
T Consensus 370 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 370 LQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp TTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred hhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 56666666777777766666555443 3355666666666654
No 24
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.2e-33 Score=292.55 Aligned_cols=273 Identities=24% Similarity=0.273 Sum_probs=230.8
Q ss_pred CCCCCCEEECcCCCCCccCChhccccccccccEEEcccCC-Ccc-cCCccccCC------CCCCEEeccCCcCCccCCc-
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCN-ISG-GIPEEISNL------TNSTIVNLGGNKLNGSIPI- 73 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~-i~~-~~~~~~~~l------~~L~~L~L~~n~l~~~~~~- 73 (499)
++++|++|+|++|.+.+..|. .+.+++ +|++|++++|+ +++ .+|..+..+ ++|++|++++|+++ .+|.
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~-~l~~l~-~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~ 323 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPT-FLKALP-EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVE 323 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCT-TTTTCS-SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCH
T ss_pred ccCCCCEEEecCCcCCccChH-HHhcCC-CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCch
Confidence 799999999999999999887 888898 89999999998 988 788888776 99999999999999 6777
Q ss_pred -cccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCcc-CCeeeccccCCCCCCccccCCC-
Q 010856 74 -TLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTS-LRIVSLGSNKLTSVPLTFWNLK- 150 (499)
Q Consensus 74 -~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~l~- 150 (499)
.+.++++|++|++++|.+++.+| .+..+++|++|++++|+++ .+|..+..+++ |+.|++++|+++.+|..+..++
T Consensus 324 ~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l 401 (636)
T 4eco_A 324 TSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSV 401 (636)
T ss_dssp HHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCS
T ss_pred hhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhccc
Confidence 89999999999999999997888 8999999999999999999 67778999999 9999999999999998777654
Q ss_pred -CCcEEEcCCCcCCCCCccccc-------CCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCC
Q 010856 151 -DILNLNFSSNFLTSPLPLEIG-------NLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLI 222 (499)
Q Consensus 151 -~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 222 (499)
+|++|++++|.+++..|..+. .+++|+.|++++|+++...+..+..+++|++|++++|+++.+.+..+....
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~ 481 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN 481 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc
Confidence 899999999999988888887 778899999999999866555667788899999999988855444444433
Q ss_pred -------CCCEEeCCCCcCCccCccccc--CCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcC
Q 010856 223 -------SLKFLNLSNNNLSGAIPASLE--KLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNEL 281 (499)
Q Consensus 223 -------~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~ 281 (499)
+|+.|++++|+++ .+|..+. .+++|+.|++++|++++.......++.++.+++++|+.
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ 548 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRD 548 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBC
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcc
Confidence 8888999998888 5666665 88888999999998887333345677888888876653
No 25
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.2e-32 Score=262.63 Aligned_cols=267 Identities=21% Similarity=0.254 Sum_probs=201.9
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|++++|.+++..+. .+..++ +|++|++++|.+++..|.+|.++++|++|++++|.++.. |..+. ++|++|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~--~~L~~L 128 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKD-DFKGLQ-HLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI-PPNLP--SSLVEL 128 (332)
T ss_dssp TTCCEEECCSSCCCEECTT-TTTTCT-TCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSC-CSSCC--TTCCEE
T ss_pred CCCeEEECCCCcCCccCHh-HhhCCC-CCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCcc-Ccccc--ccCCEE
Confidence 5688888888888877665 677777 788888888888877788888888888888888888744 33333 678888
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCC--cCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcC
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSG--SLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l 162 (499)
++++|.++...+..|..+++|++|++++|.++. ..+..+..+ +|+.|++++|+++.+|..+. ++|++|++++|.+
T Consensus 129 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 129 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp ECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCC
T ss_pred ECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcC
Confidence 888888887766678888888888888888853 566677777 88888888888888776554 6788888888888
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 8777778888888888888888888777777888888888888888888 566678888888888888888887776666
Q ss_pred cC------CCCCCEEEccCCcCc--ccCCCC-CCCCCccccccCCCc
Q 010856 243 EK------LSYLENLNLSFNKLE--GEIPRG-GSFGNFSAESFEGNE 280 (499)
Q Consensus 243 ~~------l~~L~~L~l~~N~l~--~~~~~~-~~~~~l~~~~l~~N~ 280 (499)
.. .++|+.|++++|++. +..|.. ...+.++.+++++|.
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 54 356788888888886 333322 335566666766653
No 26
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-32 Score=273.38 Aligned_cols=246 Identities=22% Similarity=0.171 Sum_probs=177.9
Q ss_pred ccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEE
Q 010856 29 LSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRL 108 (499)
Q Consensus 29 l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 108 (499)
++ +++.|++++|.++.+.+..|..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|
T Consensus 44 l~-~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LN-NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GC-CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cC-CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 45 89999999999998877778999999999999999998888899999999999999999998888889999999999
Q ss_pred eeecCCCCCcCCccccCCccCCeeeccccCCCCCC-ccccCCCCCcEEEcCCCcCCCCCcccccCC--------------
Q 010856 109 DLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP-LTFWNLKDILNLNFSSNFLTSPLPLEIGNL-------------- 173 (499)
Q Consensus 109 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------- 173 (499)
++++|+++...+..|..+++|++|++++|+++.++ ..+..+++|++|++++|.+++.....+.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 99999999777777899999999999999999864 468899999999999999987543333222
Q ss_pred --CCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEE
Q 010856 174 --KVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENL 251 (499)
Q Consensus 174 --~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 251 (499)
+.|+.|++++|.++... . ...++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|
T Consensus 203 ~~~~L~~L~l~~n~l~~~~-~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVR-G--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp CCSSCSEEECCSSCCCEEE-C--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred CCCcceEEECCCCeeeecc-c--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEE
Confidence 22333333333333221 1 1123555555555555532 345555555555555555555555555555555555
Q ss_pred EccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 252 NLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 252 ~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
++++|++++..+....++.++.+++++|.
T Consensus 278 ~L~~n~l~~~~~~~~~l~~L~~L~L~~n~ 306 (390)
T 3o6n_A 278 YISNNRLVALNLYGQPIPTLKVLDLSHNH 306 (390)
T ss_dssp ECCSSCCCEEECSSSCCTTCCEEECCSSC
T ss_pred ECCCCcCcccCcccCCCCCCCEEECCCCc
Confidence 55555555443333344555555555554
No 27
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=269.72 Aligned_cols=278 Identities=20% Similarity=0.189 Sum_probs=238.2
Q ss_pred CCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 4 CKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
|+.....+++++.++.++.. ++++|++|++++|+++++.+..|.++++|++|++++|.+++..+..|.++++|++
T Consensus 30 C~~~~~c~~~~~~l~~iP~~-----~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 30 CDRNGICKGSSGSLNSIPSG-----LTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp ECTTSEEECCSTTCSSCCTT-----CCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCeEeeCCCCCccccccc-----ccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 45666789999999966442 2348999999999999888889999999999999999999888889999999999
Q ss_pred EecccccccccCCccccCcccccEEeeecCCCCCcCC-ccccCCccCCeeecccc-CCCCC-CccccCCCCCcEEEcCCC
Q 010856 84 LGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLP-ACFSNLTSLRIVSLGSN-KLTSV-PLTFWNLKDILNLNFSSN 160 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~l~~L~~L~l~~n 160 (499)
|++++|++++..+..|.++++|++|++++|+++...+ ..+..+++|++|++++| .++.+ +..+..+++|++|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999997666669999999999999999997655 58899999999999999 57775 457889999999999999
Q ss_pred cCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCcccc---CCCCCCEEeCCCCcCCc-
Q 010856 161 FLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFG---DLISLKFLNLSNNNLSG- 236 (499)
Q Consensus 161 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~l~~N~l~~- 236 (499)
.+++..+..+..+++|+.|++++|.++...+..+..+++|++|++++|.+++..+..+. ..+.++.++++++.+++
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 99998899999999999999999999866555566789999999999999976655443 46778999999998875
Q ss_pred ---cCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCC
Q 010856 237 ---AIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 237 ---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~ 286 (499)
..|..+..+++|+.|++++|+++...+.. ..+++++.+++.+|++.|+|+
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 35677889999999999999999544443 568899999999999999875
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.4e-32 Score=283.04 Aligned_cols=120 Identities=19% Similarity=0.263 Sum_probs=72.2
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCcc-CCccccCCCC
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGS-IPITLSKLQK 80 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~ 80 (499)
+++++|++|+|++|++++..+. .+..++ +|++|++++|.+++..+..|.++++|++|++++|.+++. .|..+.++++
T Consensus 47 ~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 124 (549)
T 2z81_A 47 RACANLQVLILKSSRINTIEGD-AFYSLG-SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTN 124 (549)
T ss_dssp SSCTTCCEEECTTSCCCEECTT-TTTTCT-TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTT
T ss_pred hcCCcccEEECCCCCcCccChh-hccccc-cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCC
Confidence 4566666666666666665554 555565 666666666666666555566666666666666666642 3445666666
Q ss_pred CCeEeccccc-ccccCCccccCcccccEEeeecCCCCCcCCccc
Q 010856 81 LQGLGLEDNK-LEGSIPDDICHLAELYRLDLDGNKLSGSLPACF 123 (499)
Q Consensus 81 L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 123 (499)
|++|++++|. +....+..|.++++|++|++++|.+++..|..+
T Consensus 125 L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 125 LQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp CCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred ccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 6666666665 333333455666666666666666655444444
No 29
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=100.00 E-value=1.9e-31 Score=270.39 Aligned_cols=249 Identities=23% Similarity=0.272 Sum_probs=177.4
Q ss_pred CCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEec
Q 010856 7 LTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGL 86 (499)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 86 (499)
...++.+++.++.++.. +++++++|+|++|+++++.+..|.++++|++|+|++|.++++.+..|.++++|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQG-----IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SCEEECCSSCCSSCCSC-----CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CcEEEECCCCcCccCCC-----CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 45677777777644321 2347777777777777777777777777777777777777777777777777777777
Q ss_pred ccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccc-cCCCCCCc-cccCCCCCcEEEcCCCcCCC
Q 010856 87 EDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGS-NKLTSVPL-TFWNLKDILNLNFSSNFLTS 164 (499)
Q Consensus 87 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~-~~~~l~~L~~L~l~~n~l~~ 164 (499)
++|+++...+..|..+++|++|+|++|+++...+..|..+++|+.|++++ |.+..++. .+..+++|++|++++|.+++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 77777766666677777777777777777766666777777777777777 34444544 46667777777777777765
Q ss_pred CCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccC
Q 010856 165 PLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEK 244 (499)
Q Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 244 (499)
. | .+..+++|+.|++++|.+++..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 4 2 4666777777777777777777777777777777777777777766777777777777777777777666666777
Q ss_pred CCCCCEEEccCCcCcccC
Q 010856 245 LSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 245 l~~L~~L~l~~N~l~~~~ 262 (499)
+++|+.|++++|++.+..
T Consensus 289 l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CTTCCEEECCSSCEECST
T ss_pred ccCCCEEEccCCCcCCCC
Confidence 777777777777766543
No 30
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=2.5e-31 Score=268.44 Aligned_cols=246 Identities=24% Similarity=0.264 Sum_probs=130.9
Q ss_pred CEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecc
Q 010856 8 TLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLE 87 (499)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 87 (499)
+.++.+++.++.++.. ++.+++.|+|++|+++.+.+..|.++++|++|+|++|.++.+.+..|.++++|++|+|+
T Consensus 46 ~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 46 SKVICVRKNLREVPDG-----ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp CEEECCSCCCSSCCSC-----CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CEEEeCCCCcCcCCCC-----CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4455555555533221 12355555555555555555555555555555555555555555555555555555555
Q ss_pred cccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecccc-CCCCCCc-cccCCCCCcEEEcCCCcCCCC
Q 010856 88 DNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSN-KLTSVPL-TFWNLKDILNLNFSSNFLTSP 165 (499)
Q Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~-~~~~l~~L~~L~l~~n~l~~~ 165 (499)
+|+++...+..|..+++|++|+|++|+++...+..|..+++|+.|++++| .+..++. .+..+++|++|++++|.++.+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 55555444445555555555555555555555555555555555555552 3333332 344555555555555555532
Q ss_pred CcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCC
Q 010856 166 LPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKL 245 (499)
Q Consensus 166 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 245 (499)
| .+..+++|+.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|..+
T Consensus 201 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 -P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp -C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred -c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 2 34455555555555555555555555555555555555555555555555555555555555555555554555555
Q ss_pred CCCCEEEccCCcCcc
Q 010856 246 SYLENLNLSFNKLEG 260 (499)
Q Consensus 246 ~~L~~L~l~~N~l~~ 260 (499)
++|+.|+|++|++.+
T Consensus 279 ~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 279 HHLERIHLHHNPWNC 293 (440)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEcCCCCccC
Confidence 555555555555543
No 31
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=1.7e-32 Score=263.47 Aligned_cols=250 Identities=20% Similarity=0.185 Sum_probs=198.2
Q ss_pred CEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccC--CccccCCCCCCeEe
Q 010856 8 TLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSI--PITLSKLQKLQGLG 85 (499)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~ 85 (499)
+.++++++.++.++.. ++++|++|++++|+++.+.+..|.++++|++|+|++|.++... +..+..+++|++|+
T Consensus 10 ~~l~c~~~~l~~ip~~-----~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTG-----IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TEEECCSSCCSSCCSC-----CCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CEEEcCCCCcccCCCC-----CCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 5788888888755432 2347889999999888766667888889999999998887432 45666788888899
Q ss_pred cccccccccCCccccCcccccEEeeecCCCCCcCC-ccccCCccCCeeeccccCCCC-CCccccCCCCCcEEEcCCCcCC
Q 010856 86 LEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLP-ACFSNLTSLRIVSLGSNKLTS-VPLTFWNLKDILNLNFSSNFLT 163 (499)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~ 163 (499)
+++|.++. ++..+..+++|++|++++|++++..+ ..+..+++|++|++++|.++. .+..+..+++|++|++++|.++
T Consensus 85 Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 98888874 55668888888888888888886655 577888888888888888876 4556777888888888888887
Q ss_pred C-CCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 164 S-PLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 164 ~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
+ ..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 5 467778888888888888888887777888888888888888888887777778888888888888888888888888
Q ss_pred cCCC-CCCEEEccCCcCcccCC
Q 010856 243 EKLS-YLENLNLSFNKLEGEIP 263 (499)
Q Consensus 243 ~~l~-~L~~L~l~~N~l~~~~~ 263 (499)
..++ +|+.|++++|++++..+
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGG
T ss_pred HhhhccCCEEEccCCCeecccC
Confidence 8774 88888888888876543
No 32
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=3.3e-31 Score=259.23 Aligned_cols=260 Identities=25% Similarity=0.377 Sum_probs=165.5
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCC
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKL 81 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 81 (499)
..+++|++|++++|.+++..+ +..++ +|++|++++|.+++. ++|..+++|++|++++|.+++..+ +..+++|
T Consensus 63 ~~~~~L~~L~l~~n~i~~~~~---~~~l~-~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L 134 (347)
T 4fmz_A 63 EYLTNLEYLNLNGNQITDISP---LSNLV-KLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKM 134 (347)
T ss_dssp GGCTTCCEEECCSSCCCCCGG---GTTCT-TCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTC
T ss_pred hhcCCccEEEccCCccccchh---hhcCC-cCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCce
Confidence 467889999999998886533 66677 899999999888854 368888899999999888885433 7788888
Q ss_pred CeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCc
Q 010856 82 QGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNF 161 (499)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~ 161 (499)
++|++++|...... ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|.
T Consensus 135 ~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 135 YSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp CEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSC
T ss_pred eEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCC
Confidence 88888888554333 347777777888887777775433 6667777777777777776654 5555666666666666
Q ss_pred CCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCccc
Q 010856 162 LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPAS 241 (499)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 241 (499)
+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..
T Consensus 211 l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~ 282 (347)
T 4fmz_A 211 ITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SV 282 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GG
T ss_pred CCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hh
Confidence 554332 4555556666666665554332 55555555555555555532 3455555555555555555543 23
Q ss_pred ccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcC
Q 010856 242 LEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNEL 281 (499)
Q Consensus 242 ~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~ 281 (499)
+..+++|+.|++++|++++..+.. ..+++++.+++++|++
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 283 LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp GGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred hcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 455555555555555555443321 2344555555555553
No 33
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=2.7e-31 Score=268.26 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=227.4
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
....++.+++.++ .+|..+. ++++.|+|++|+++.+.+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 5678999999998 4555554 689999999999999888999999999999999999998888999999999999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcCC-CcCCCCCcccccCCCCccEEEccCCccccc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFSS-NFLTSPLPLEIGNLKVLIGIDFSMNNFSGV 189 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (499)
+|+++...+..|..+++|++|++++|+++.++. .+..+++|++|++++ |.+..+.+..|.++++|+.|++++|.++..
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 999998888899999999999999999999765 688899999999999 456666667899999999999999999855
Q ss_pred CcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCC
Q 010856 190 IPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSF 268 (499)
Q Consensus 190 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~ 268 (499)
| .+..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+.. ..+
T Consensus 201 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 -P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp -C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred -c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 3 5889999999999999999999999999999999999999999999999999999999999999999766654 457
Q ss_pred CCccccccCCCcCCCCCCC
Q 010856 269 GNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 269 ~~l~~~~l~~N~~~c~~~~ 287 (499)
+.++.+++.+|||.|+|..
T Consensus 279 ~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTCCEEECCSSCEECSSTT
T ss_pred cCCCEEEcCCCCccCCCCc
Confidence 8899999999999999854
No 34
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.98 E-value=2.1e-31 Score=290.16 Aligned_cols=274 Identities=20% Similarity=0.222 Sum_probs=152.4
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCcc--ccCCC
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPIT--LSKLQ 79 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~ 79 (499)
+++++|++|+|++|...+..+...+.+++ +|++|+|++|.+++..|++|.++++|++|+|++|.+++..+.. |.+++
T Consensus 45 ~~l~~L~~LdLs~n~~~~~i~~~~f~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~ 123 (844)
T 3j0a_A 45 PFLEQLQLLELGSQYTPLTIDKEAFRNLP-NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123 (844)
T ss_dssp SSCCSCSEEEECTTCCCCEECTTTTSSCT-TCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCS
T ss_pred cccccCeEEeCCCCCCccccCHHHhcCCC-CCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccC
Confidence 34445555555554332222112444454 5555555555555555555555555555555555555433322 55555
Q ss_pred CCCeEecccccccccCC-ccccCcccccEEeeecCCCCCcCCccccCC--cc----------------------------
Q 010856 80 KLQGLGLEDNKLEGSIP-DDICHLAELYRLDLDGNKLSGSLPACFSNL--TS---------------------------- 128 (499)
Q Consensus 80 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~---------------------------- 128 (499)
+|++|+|++|.+++..+ ..|.++++|++|++++|.+++..+..+..+ ++
T Consensus 124 ~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 203 (844)
T 3j0a_A 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203 (844)
T ss_dssp SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTT
T ss_pred CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCcccc
Confidence 55555555555544332 345555555555555555544443333322 22
Q ss_pred --CCeeeccccCCCC-CCccc------------------------------------cC--CCCCcEEEcCCCcCCCCCc
Q 010856 129 --LRIVSLGSNKLTS-VPLTF------------------------------------WN--LKDILNLNFSSNFLTSPLP 167 (499)
Q Consensus 129 --L~~L~L~~n~l~~-~~~~~------------------------------------~~--l~~L~~L~l~~n~l~~~~~ 167 (499)
|+.|++++|.++. .+..+ .. .++|+.|++++|.+.+..+
T Consensus 204 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp CCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred CceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 3333333332221 11000 00 1456666666666666666
Q ss_pred ccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCC
Q 010856 168 LEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSY 247 (499)
Q Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 247 (499)
..|..+++|+.|++++|++++..+..|.++++|++|++++|.+++..+..|..+++|+.|++++|++....+..|..+++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 66777777777777777777776777777777777777777777666777777777777777777777666667777777
Q ss_pred CCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 248 LENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 248 L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
|+.|++++|.+++... ++.+..+.+.+|.
T Consensus 364 L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~ 392 (844)
T 3j0a_A 364 LQTLDLRDNALTTIHF----IPSIPDIFLSGNK 392 (844)
T ss_dssp CCEEEEETCCSCCCSS----CCSCSEEEEESCC
T ss_pred CCEEECCCCCCCcccC----CCCcchhccCCCC
Confidence 7777777777764321 3344444444443
No 35
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.98 E-value=2.9e-31 Score=268.94 Aligned_cols=251 Identities=24% Similarity=0.240 Sum_probs=227.6
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
....++.+++.++. +|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 46789999999984 555554 689999999999999989999999999999999999998888999999999999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcCC-CcCCCCCcccccCCCCccEEEccCCccccc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFSS-NFLTSPLPLEIGNLKVLIGIDFSMNNFSGV 189 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (499)
+|+++...+..|..+++|++|++++|+++.++. .+..+++|++|++++ |.+..+.+..|.++++|+.|++++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 999998888889999999999999999999765 688999999999999 566666667899999999999999999865
Q ss_pred CcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCC
Q 010856 190 IPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSF 268 (499)
Q Consensus 190 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~ 268 (499)
..+..+++|++|+|++|.+++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+.. ..+
T Consensus 212 --~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 --PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp --CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred --ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 35889999999999999999999999999999999999999999999999999999999999999999766654 457
Q ss_pred CCccccccCCCcCCCCCCC
Q 010856 269 GNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 269 ~~l~~~~l~~N~~~c~~~~ 287 (499)
+++..+++.+|||.|+|..
T Consensus 290 ~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCCEEECCSSCEECSTTT
T ss_pred cCCCEEEccCCCcCCCCCc
Confidence 8899999999999999864
No 36
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=6.3e-31 Score=280.49 Aligned_cols=253 Identities=25% Similarity=0.250 Sum_probs=204.4
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
+++++|+|++|.+++..+. .+.+++ +|++|++++|.+++..|.+|.++++|++|+|++|.++.+.+..|.++++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~-~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAA-NFTRYS-QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGG-GGGGGT-TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHH-HHhCCC-cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 5789999999999977665 788888 89999999999998889999999999999999999997777789999999999
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCcc---ccCCCCCcEEEcCCCc
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT---FWNLKDILNLNFSSNF 161 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~l~~L~~L~l~~n~ 161 (499)
++++|.+++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.++.++.. ...+++|++|++++|.
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999877778899999999999999999988888888999999999999999886543 3356889999999998
Q ss_pred CCCCCcccccCC---------------------------CCccEEEccCCcccccCcccccCCcC--CceeeCcCCcCCC
Q 010856 162 LTSPLPLEIGNL---------------------------KVLIGIDFSMNNFSGVIPTEIGGLKN--LEYLFLGYNRLQG 212 (499)
Q Consensus 162 l~~~~~~~~~~l---------------------------~~L~~L~l~~n~l~~~~~~~l~~l~~--L~~L~L~~n~l~~ 212 (499)
+++..+..+..+ ++|+.|++++|.+++..+..|.+++. |++|++++|.+++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 888777655543 45666777777777777777776654 8888888887777
Q ss_pred CCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCc
Q 010856 213 SIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 213 ~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|...
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~ 309 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhh
Confidence 77777777778888888888777766666666666666666655443
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.98 E-value=2.2e-31 Score=274.96 Aligned_cols=269 Identities=21% Similarity=0.212 Sum_probs=169.4
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|+|++|.+++..+. .+..++ +|++|++++|++++..|.+|.++++|++|+|++|+++. +|.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~-~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTS-DILSLS-KLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHH-HHTTCT-TCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChh-hccccc-cccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEE
Confidence 4677777777777766554 566666 67777777777777767777777777777777777774 3333 66777777
Q ss_pred eccccccccc-CCccccCcccccEEeeecCCCCCcCCccccCCccC--CeeeccccCC--CC-CCccccCC---------
Q 010856 85 GLEDNKLEGS-IPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSL--RIVSLGSNKL--TS-VPLTFWNL--------- 149 (499)
Q Consensus 85 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~-~~~~~~~l--------- 149 (499)
+|++|.+++. .|..|..+++|++|++++|.+++ ..+..+++| +.|++++|.+ .. .|..+..+
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 7777777652 45667777777777777666653 122333333 3333333333 11 11111110
Q ss_pred --------------------------------------------------------------------------CCCcEE
Q 010856 150 --------------------------------------------------------------------------KDILNL 155 (499)
Q Consensus 150 --------------------------------------------------------------------------~~L~~L 155 (499)
++|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 123333
Q ss_pred EcCCCcCCCCCccc-----------------------------------------------------ccCCCCccEEEcc
Q 010856 156 NFSSNFLTSPLPLE-----------------------------------------------------IGNLKVLIGIDFS 182 (499)
Q Consensus 156 ~l~~n~l~~~~~~~-----------------------------------------------------~~~l~~L~~L~l~ 182 (499)
++++|.+++..|.. +..+++|++|+++
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 33333322211111 1566778888888
Q ss_pred CCcccccCcccccCCcCCceeeCcCCcCCC--CCCccccCCCCCCEEeCCCCcCCc-cCcccccCCCCCCEEEccCCcCc
Q 010856 183 MNNFSGVIPTEIGGLKNLEYLFLGYNRLQG--SIPDSFGDLISLKFLNLSNNNLSG-AIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
+|++++..|..+..+++|++|++++|++++ ..|..+..+++|+.|++++|++++ ..+..+..+++|+.|++++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 888887777778888888888888888875 334667788888888888888876 33345777788888888888887
Q ss_pred ccCCCCCCCCCccccccCCCcCC
Q 010856 260 GEIPRGGSFGNFSAESFEGNELL 282 (499)
Q Consensus 260 ~~~~~~~~~~~l~~~~l~~N~~~ 282 (499)
+..|.... +.++.+++++|...
T Consensus 413 ~~~~~~l~-~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 413 DTIFRCLP-PRIKVLDLHSNKIK 434 (520)
T ss_dssp GGGGGSCC-TTCCEEECCSSCCC
T ss_pred cchhhhhc-ccCCEEECCCCccc
Confidence 66655422 57777888877654
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.98 E-value=5.6e-31 Score=274.41 Aligned_cols=269 Identities=19% Similarity=0.165 Sum_probs=199.7
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|+|++|.+++..+. .+..++ +|++|++++|.++++.|++|.++++|++|+|++|+++.+ |.. .+++|++|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~-~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~L 126 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMP-DISFLS-ELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNI-SCC--PMASLRHL 126 (562)
T ss_dssp TTCCEEECCSSCCCCCCGG-GTTTCT-TCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEE-CSC--CCTTCSEE
T ss_pred CCcCEEECCCCCccccChh-hhccCC-CccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCcc-Ccc--ccccCCEE
Confidence 5677888888888766655 677777 788888888888777777788888888888888887743 333 67778888
Q ss_pred eccccccccc-CCccccCcccccEEeeecCCCCCcCCccccCCccC--CeeeccccCC--CC-CCccccCC---------
Q 010856 85 GLEDNKLEGS-IPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSL--RIVSLGSNKL--TS-VPLTFWNL--------- 149 (499)
Q Consensus 85 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~-~~~~~~~l--------- 149 (499)
++++|++++. .|..|.++++|++|++++|++++. .+..+++| +.|++++|++ +. .|..+..+
T Consensus 127 ~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l 203 (562)
T 3a79_B 127 DLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203 (562)
T ss_dssp ECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEE
T ss_pred ECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEe
Confidence 8888887753 346777788888888888777642 33444444 6677766666 32 22222221
Q ss_pred ------------------------------------------------------------------------CCCcEEEc
Q 010856 150 ------------------------------------------------------------------------KDILNLNF 157 (499)
Q Consensus 150 ------------------------------------------------------------------------~~L~~L~l 157 (499)
++|++|++
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence 15666666
Q ss_pred CCCcCCCCCcccc-----------------------------------------------------cCCCCccEEEccCC
Q 010856 158 SSNFLTSPLPLEI-----------------------------------------------------GNLKVLIGIDFSMN 184 (499)
Q Consensus 158 ~~n~l~~~~~~~~-----------------------------------------------------~~l~~L~~L~l~~n 184 (499)
++|.+++.+|..+ ..+++|++|++++|
T Consensus 284 ~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred eccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCC
Confidence 6666665444433 67889999999999
Q ss_pred cccccCcccccCCcCCceeeCcCCcCCCCC--CccccCCCCCCEEeCCCCcCCc-cCcccccCCCCCCEEEccCCcCccc
Q 010856 185 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSI--PDSFGDLISLKFLNLSNNNLSG-AIPASLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 185 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~ 261 (499)
.+++..|..+..+++|++|++++|++++.. |..+..+++|+.|++++|++++ ..+..+..+++|+.|++++|++++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 999988999999999999999999999743 4678999999999999999998 5555688889999999999999877
Q ss_pred CCCCCCCCCccccccCCCcCC
Q 010856 262 IPRGGSFGNFSAESFEGNELL 282 (499)
Q Consensus 262 ~~~~~~~~~l~~~~l~~N~~~ 282 (499)
.|.... +.++.+++++|...
T Consensus 444 ~~~~l~-~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 444 VFRCLP-PKVKVLDLHNNRIM 463 (562)
T ss_dssp GGSSCC-TTCSEEECCSSCCC
T ss_pred hhhhhc-CcCCEEECCCCcCc
Confidence 665432 57888888888654
No 39
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.98 E-value=1.8e-31 Score=286.70 Aligned_cols=271 Identities=22% Similarity=0.246 Sum_probs=213.5
Q ss_pred CCCCCCEEECcCCCCCccCChhccccccccccEEEcccCC-Ccc-cCCccccCCC-------CCCEEeccCCcCCccCCc
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCN-ISG-GIPEEISNLT-------NSTIVNLGGNKLNGSIPI 73 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~-i~~-~~~~~~~~l~-------~L~~L~L~~n~l~~~~~~ 73 (499)
++++|++|+|++|.+.+..|. .+.+++ +|++|+|++|+ +++ .+|..+..++ +|++|+|++|.++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~-~l~~L~-~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPD-FLYDLP-ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCG-GGGGCS-SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred cCCCCCEEECcCCCCCccChH-HHhCCC-CCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 799999999999999999997 888998 99999999998 887 7777666554 9999999999999 6777
Q ss_pred --cccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCcc-CCeeeccccCCCCCCccccCCC
Q 010856 74 --TLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTS-LRIVSLGSNKLTSVPLTFWNLK 150 (499)
Q Consensus 74 --~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~l~ 150 (499)
.|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|+++.+|..+..++
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~ 642 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKS 642 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTC
T ss_pred hhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccc
Confidence 8999999999999999999 667 8999999999999999999 77888999998 9999999999999988776665
Q ss_pred C--CcEEEcCCCcCCCCCcccc---c--CCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCC--
Q 010856 151 D--ILNLNFSSNFLTSPLPLEI---G--NLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDL-- 221 (499)
Q Consensus 151 ~--L~~L~l~~n~l~~~~~~~~---~--~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-- 221 (499)
. |+.|++++|.+++.+|... . .+++|+.|++++|.++...+..+..+++|+.|+|++|+++.+.+..+...
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~ 722 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDG 722 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTS
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccc
Confidence 4 8889999988877544322 2 33478888888888875444444577788888888887774433333322
Q ss_pred -----CCCCEEeCCCCcCCccCccccc--CCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 222 -----ISLKFLNLSNNNLSGAIPASLE--KLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 222 -----~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++..+....+++++.+++++|+
T Consensus 723 ~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 723 NYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp CCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred cccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 27788888888777 4555665 7778888888888887643334456677777777765
No 40
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=3.5e-31 Score=278.66 Aligned_cols=119 Identities=22% Similarity=0.237 Sum_probs=91.9
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQK 80 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 80 (499)
|+++++|++|+|++|.++++.|. .+.+++ +|++|+|++|.+++..|.+|.++++|++|++++|.+++..+..+.++++
T Consensus 52 ~~~l~~L~~L~Ls~n~l~~i~~~-~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 129 (606)
T 3vq2_A 52 FSNFSELQWLDLSRCEIETIEDK-AWHGLH-HLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLIT 129 (606)
T ss_dssp TTTCTTCCEEECTTCCCCEECTT-TTTTCT-TCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTT
T ss_pred ccCCccCcEEeCCCCcccccCHH-Hhhchh-hcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCC
Confidence 45677888888888888877665 667777 7888888888888777788888888888888888887776677888888
Q ss_pred CCeEecccccccc-cCCccccCcccccEEeeecCCCCCcCCc
Q 010856 81 LQGLGLEDNKLEG-SIPDDICHLAELYRLDLDGNKLSGSLPA 121 (499)
Q Consensus 81 L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 121 (499)
|++|++++|.+.+ .+|..|.++++|++|++++|++++..+.
T Consensus 130 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 130 LKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 8888888888775 3577788888888888888877655443
No 41
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=8.1e-32 Score=289.28 Aligned_cols=275 Identities=24% Similarity=0.330 Sum_probs=234.1
Q ss_pred CCCCCCCCEEECcCCCCCc-----------------cCChhccc--cccccccEEEcccCCCcccCCccccCCCCCCEEe
Q 010856 1 MSNCKSLTLIYLSNNPLDG-----------------ILPKTSVG--NLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVN 61 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~--~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 61 (499)
|++|++|++|+|++|.+++ ..|. .++ +++ +|++|+|++|.+.+.+|..|.++++|++|+
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~-~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~ 521 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLK-DLTDVELYNCPNMTQLPDFLYDLPELQSLN 521 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCT-TCCEEEEESCTTCCSCCGGGGGCSSCCEEE
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCC-CCCEEECcCCCCCccChHHHhCCCCCCEEE
Confidence 3578999999999999998 2565 555 888 899999999999999999999999999999
Q ss_pred ccCCc-CCc-cCCccccC-------CCCCCeEecccccccccCCc--cccCcccccEEeeecCCCCCcCCccccCCccCC
Q 010856 62 LGGNK-LNG-SIPITLSK-------LQKLQGLGLEDNKLEGSIPD--DICHLAELYRLDLDGNKLSGSLPACFSNLTSLR 130 (499)
Q Consensus 62 L~~n~-l~~-~~~~~~~~-------l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 130 (499)
|++|+ +++ ..|..+.. +++|+.|+|++|.++ .+|. .+..+++|+.|+|++|+++ .+| .|..+++|+
T Consensus 522 Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~ 598 (876)
T 4ecn_A 522 IACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLT 598 (876)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEES
T ss_pred CcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcce
Confidence 99998 887 66765544 459999999999999 7777 8999999999999999999 666 899999999
Q ss_pred eeeccccCCCCCCccccCCCC-CcEEEcCCCcCCCCCcccccCCCC--ccEEEccCCcccccCcccc---c--CCcCCce
Q 010856 131 IVSLGSNKLTSVPLTFWNLKD-ILNLNFSSNFLTSPLPLEIGNLKV--LIGIDFSMNNFSGVIPTEI---G--GLKNLEY 202 (499)
Q Consensus 131 ~L~L~~n~l~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~l---~--~l~~L~~ 202 (499)
.|++++|+++.+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|++++|++++..|... . .+++|+.
T Consensus 599 ~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~ 677 (876)
T 4ecn_A 599 DLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAST 677 (876)
T ss_dssp EEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEE
T ss_pred EEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCE
Confidence 999999999999999999999 999999999999 56777777654 9999999999987665332 2 3458999
Q ss_pred eeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCC-------CCCCEEEccCCcCcccCCCC-C--CCCCcc
Q 010856 203 LFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKL-------SYLENLNLSFNKLEGEIPRG-G--SFGNFS 272 (499)
Q Consensus 203 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l-------~~L~~L~l~~N~l~~~~~~~-~--~~~~l~ 272 (499)
|++++|.++.+.+..+..+++|+.|+|++|+++...+..+... ++|+.|+|++|+++. +|.. . .+++++
T Consensus 678 L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~-lp~~l~~~~l~~L~ 756 (876)
T 4ecn_A 678 VTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLS 756 (876)
T ss_dssp EECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCC-CCGGGSTTTCTTCC
T ss_pred EEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCcc-chHHhhhccCCCcC
Confidence 9999999995554556689999999999999995544444433 399999999999994 5543 3 688999
Q ss_pred ccccCCCcCC
Q 010856 273 AESFEGNELL 282 (499)
Q Consensus 273 ~~~l~~N~~~ 282 (499)
.+++++|...
T Consensus 757 ~L~Ls~N~L~ 766 (876)
T 4ecn_A 757 NMDVSYNCFS 766 (876)
T ss_dssp EEECCSSCCS
T ss_pred EEEeCCCCCC
Confidence 9999999754
No 42
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=5.4e-31 Score=276.13 Aligned_cols=248 Identities=22% Similarity=0.200 Sum_probs=179.0
Q ss_pred ccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEE
Q 010856 29 LSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRL 108 (499)
Q Consensus 29 l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 108 (499)
++ +++.|++++|.+..+.+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 50 l~-~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LN-NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GC-CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CC-CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 44 89999999999998888889999999999999999999888899999999999999999999888889999999999
Q ss_pred eeecCCCCCcCCccccCCccCCeeeccccCCCCCC-ccccCCCCCcEEEcCCCcCCCCCcccccCC--------------
Q 010856 109 DLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP-LTFWNLKDILNLNFSSNFLTSPLPLEIGNL-------------- 173 (499)
Q Consensus 109 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------- 173 (499)
+|++|.+++.++..|..+++|++|++++|.++.++ ..+..+++|++|++++|.+++.....+.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 99999999888888899999999999999999965 468899999999999999987543333222
Q ss_pred --C---------------------CccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCC
Q 010856 174 --K---------------------VLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLS 230 (499)
Q Consensus 174 --~---------------------~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 230 (499)
+ +|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|+
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 286 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 286 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECT
T ss_pred CCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECC
Confidence 1 23333333333332 2334455555555555555555555555555555555555
Q ss_pred CCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 231 NNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 231 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
+|.+++ .|..+..+++|+.|+|++|++++..+....++.+..+++.+|+
T Consensus 287 ~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~ 335 (597)
T 3oja_B 287 NNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNS 335 (597)
T ss_dssp TSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSC
T ss_pred CCCCCC-CCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECCCCC
Confidence 555553 2333444555555555555555332222334455555555554
No 43
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.3e-31 Score=252.93 Aligned_cols=250 Identities=24% Similarity=0.221 Sum_probs=133.6
Q ss_pred CEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecc
Q 010856 8 TLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLE 87 (499)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 87 (499)
++++++++.++.++.. ++++|++|++++|.++++.+..|..+++|++|++++|.+++..+..|..+++|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~~-----~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-----IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCTT-----CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCcC-----CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 3455555555543221 12255556665555555555555555555555555555555555555555555555555
Q ss_pred ccc-ccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCC
Q 010856 88 DNK-LEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPL 166 (499)
Q Consensus 88 ~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (499)
+|. ++...+..|..+++|++|++++|++++..+..+..+++|++|++++|+++. ..
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~ 145 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-----------------------LP 145 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-----------------------CC
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc-----------------------cC
Confidence 554 444444455555555555555555554444444445555555555554444 44
Q ss_pred cccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCC
Q 010856 167 PLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLS 246 (499)
Q Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 246 (499)
+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 44455555555555555555544444555556666666666666555555566666666666666666655555566666
Q ss_pred CCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCC
Q 010856 247 YLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 247 ~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~ 285 (499)
+|+.|++++|++.+..+....+..+.......+...|..
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 666666666666554433222223333444445545543
No 44
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.2e-31 Score=253.05 Aligned_cols=227 Identities=23% Similarity=0.235 Sum_probs=180.5
Q ss_pred CEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecccc
Q 010856 58 TIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSN 137 (499)
Q Consensus 58 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 137 (499)
++++.+++.++.+ |..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 4555666555532 3222 345666666666666555556666666666666666666666666777777777777777
Q ss_pred C-CCCC-CccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCC
Q 010856 138 K-LTSV-PLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIP 215 (499)
Q Consensus 138 ~-l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 215 (499)
. ++.+ +..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 6665 5567777888888888888887778888999999999999999998888889999999999999999998888
Q ss_pred ccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCC-CCCCCCccccccCCCcCCCCCCC
Q 010856 216 DSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGSFGNFSAESFEGNELLCGSPN 287 (499)
Q Consensus 216 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~~~l~~N~~~c~~~~ 287 (499)
..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++..+. ...++.++.+++.+|++.|+|+.
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 8899999999999999999999899999999999999999999976654 35678899999999999998864
No 45
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=7.3e-32 Score=264.42 Aligned_cols=257 Identities=16% Similarity=0.164 Sum_probs=225.0
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|++++|.++++.+. .+..++ +|++|++++|.+++..+.+|.++++|++|++++|++++..+..|.++++|++|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 129 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNS-DLQRCV-NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFL 129 (353)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEE
T ss_pred ccCcEEECCCCcCcccCHH-HhccCC-CCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEE
Confidence 5899999999999987765 788888 99999999999999989999999999999999999997766679999999999
Q ss_pred ecccccccccCC-ccccCcccccEEeeecC-CCCCcCCccccCCccCCeeeccccCCCCC-CccccCCCCCcEEEcCCCc
Q 010856 85 GLEDNKLEGSIP-DDICHLAELYRLDLDGN-KLSGSLPACFSNLTSLRIVSLGSNKLTSV-PLTFWNLKDILNLNFSSNF 161 (499)
Q Consensus 85 ~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~ 161 (499)
++++|+++...+ ..+..+++|++|++++| .+....+..|..+++|+.|++++|+++.+ |..+..+++|++|++++|.
T Consensus 130 ~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 130 NLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp ECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred ECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 999999996555 57899999999999999 57777788999999999999999999984 7789999999999999999
Q ss_pred CCCCCcccccCCCCccEEEccCCcccccCccccc---CCcCCceeeCcCCcCCC----CCCccccCCCCCCEEeCCCCcC
Q 010856 162 LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIG---GLKNLEYLFLGYNRLQG----SIPDSFGDLISLKFLNLSNNNL 234 (499)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~l~~N~l 234 (499)
++......+..+++|+.|++++|.+++..+..+. ..+.++.++++++.+.+ .+|..+..+++|+.|++++|++
T Consensus 210 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l 289 (353)
T 2z80_A 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQL 289 (353)
T ss_dssp STTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCC
T ss_pred cccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCC
Confidence 9865555566789999999999999987655443 45678889999888875 3567789999999999999999
Q ss_pred CccCcccccCCCCCCEEEccCCcCcccCC
Q 010856 235 SGAIPASLEKLSYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 235 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 263 (499)
+...+..|..+++|++|++++|++++..|
T Consensus 290 ~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 290 KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 96666667999999999999999998765
No 46
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.1e-31 Score=253.19 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=223.1
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccC--CccccCcccccEEe
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSI--PDDICHLAELYRLD 109 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~ 109 (499)
.-+.++++++.++. +|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|.++... +..+..+++|++|+
T Consensus 8 ~~~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 8 SGTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp ETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCCEEEcCCCCccc-CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 35679999999984 454443 68999999999999777777899999999999999998442 56677899999999
Q ss_pred eecCCCCCcCCccccCCccCCeeeccccCCCCCCc--cccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCccc
Q 010856 110 LDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL--TFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFS 187 (499)
Q Consensus 110 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (499)
+++|.++. .+..+..+++|++|++++|+++.++. .+..+++|++|++++|.+++..+..+..+++|+.|++++|.++
T Consensus 85 Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 99999994 56668899999999999999999764 7889999999999999999888888999999999999999998
Q ss_pred c-cCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-
Q 010856 188 G-VIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG- 265 (499)
Q Consensus 188 ~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~- 265 (499)
+ ..|..+..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 7 57888999999999999999999888999999999999999999999888888999999999999999999887765
Q ss_pred CCC-CCccccccCCCcCCCCCC
Q 010856 266 GSF-GNFSAESFEGNELLCGSP 286 (499)
Q Consensus 266 ~~~-~~l~~~~l~~N~~~c~~~ 286 (499)
..+ +.+..+++.+|++.|+|.
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGG
T ss_pred HhhhccCCEEEccCCCeecccC
Confidence 345 489999999999999875
No 47
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1.9e-30 Score=253.79 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=195.8
Q ss_pred CCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCC
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQ 82 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 82 (499)
.+++|++|++++|.+... + .+..++ +|++|++++|.+++..+ |..+++|++|++++|.++.. ..+..+++|+
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~--~~~~~~-~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q--GIEYLT-NLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T--TGGGCT-TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred hcccccEEEEeCCccccc-h--hhhhcC-CccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 457788888888888754 2 355666 78888888888875543 78888888888888888753 3578888888
Q ss_pred eEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcC
Q 010856 83 GLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l 162 (499)
+|++++|.+++..+ +..+++|++|++++|......+ .+..+++|++|++++|.+..++. +..+++|++|++++|.+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcc
Confidence 88888888875433 7788888888888886554433 47788888888888888887665 77788888888888888
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~ 261 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAV 261 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhH
Confidence 76433 7778888888888888876544 7778888888888888875533 77888888888888888754 467
Q ss_pred cCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcC
Q 010856 243 EKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNEL 281 (499)
Q Consensus 243 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~ 281 (499)
..+++|+.|++++|++++. +....+++++.+++.+|+.
T Consensus 262 ~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred hcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcC
Confidence 7888888888888888754 4455667788888888864
No 48
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=2.5e-31 Score=276.52 Aligned_cols=273 Identities=19% Similarity=0.148 Sum_probs=194.6
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|+|++|++++..+. .+..++ +|++|++++|.+++..|++|.++++|++|++++|.+++..+..|.++++|++|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~-~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 103 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHG-DLRACA-NLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL 103 (549)
T ss_dssp TTCCEEECCSSCCCEECSS-TTSSCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEE
T ss_pred CCccEEECcCCccCccChh-hhhcCC-cccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEE
Confidence 5899999999999988776 788888 89999999999999999999999999999999999998888889999999999
Q ss_pred eccccccccc-CCccccCcccccEEeeecCC-CCCcCCccccCCccCCeeeccccCCCC-CCccccC-------------
Q 010856 85 GLEDNKLEGS-IPDDICHLAELYRLDLDGNK-LSGSLPACFSNLTSLRIVSLGSNKLTS-VPLTFWN------------- 148 (499)
Q Consensus 85 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~------------- 148 (499)
++++|.+++. .|..+.++++|++|++++|. +....+..|.++++|++|++++|+++. .|..+..
T Consensus 104 ~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 104 NLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp ECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred ECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 9999999864 46789999999999999998 554555789999999999999999987 5555544
Q ss_pred -----------CCCCcEEEcCCCcCCCCC--cc-cccCC-----------------------------------------
Q 010856 149 -----------LKDILNLNFSSNFLTSPL--PL-EIGNL----------------------------------------- 173 (499)
Q Consensus 149 -----------l~~L~~L~l~~n~l~~~~--~~-~~~~l----------------------------------------- 173 (499)
+++|++|++++|.+++.. +. ....+
T Consensus 184 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~ 263 (549)
T 2z81_A 184 SAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTL 263 (549)
T ss_dssp STTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEE
T ss_pred ccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccc
Confidence 456666666666665421 00 00011
Q ss_pred ----------------------------------------------CCccEEEccCCcccccCcccc-cCCcCCceeeCc
Q 010856 174 ----------------------------------------------KVLIGIDFSMNNFSGVIPTEI-GGLKNLEYLFLG 206 (499)
Q Consensus 174 ----------------------------------------------~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~L~ 206 (499)
.+|+.|++++|.++. .|..+ ..+++|++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls 342 (549)
T 2z81_A 264 NGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLS 342 (549)
T ss_dssp ECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECC
T ss_pred cccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcccc-CCHHHHhcCccccEEEcc
Confidence 123333333333331 22222 346666666666
Q ss_pred CCcCCCCCC---ccccCCCCCCEEeCCCCcCCccCc--ccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 207 YNRLQGSIP---DSFGDLISLKFLNLSNNNLSGAIP--ASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 207 ~n~l~~~~~---~~l~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
+|++++..+ ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++++..+.....+.++.+++++|.
T Consensus 343 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~ 421 (549)
T 2z81_A 343 ENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTG 421 (549)
T ss_dssp SSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSC
T ss_pred CCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCC
Confidence 666665432 235566667777777776664432 34666677777777777776433333445566666666665
No 49
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.7e-30 Score=250.07 Aligned_cols=224 Identities=20% Similarity=0.247 Sum_probs=195.6
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 7888888888888 55667777888888888888888 67777888888888888888888 667788888888888888
Q ss_pred cCCCCCcCCccccC---------CccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEcc
Q 010856 112 GNKLSGSLPACFSN---------LTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFS 182 (499)
Q Consensus 112 ~n~l~~~~~~~~~~---------l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 182 (499)
+|++.+..|..+.. +++|++|++++|+++.+|..+..+++|++|++++|.+++ .|..+..+++|+.|+++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLR 237 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECT
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECc
Confidence 88877777776654 899999999999999999889999999999999999986 45578899999999999
Q ss_pred CCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCc
Q 010856 183 MNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
+|.+.+..|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99998889999999999999999999988889999999999999999999999999999999999999999988765
No 50
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.8e-30 Score=269.86 Aligned_cols=116 Identities=20% Similarity=0.239 Sum_probs=90.5
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCC
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQK 80 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 80 (499)
|.++++|++|+|++|+++++.+. .+..++ +|++|++++|.+++..|.+|.++++|++|++++|.++...+..+.++++
T Consensus 48 ~~~l~~L~~L~Ls~n~i~~i~~~-~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 125 (570)
T 2z63_A 48 FFSFPELQVLDLSRCEIQTIEDG-AYQSLS-HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125 (570)
T ss_dssp TTTCSSCCEEECTTCCCCEECTT-TTTTCT-TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTT
T ss_pred hhCCCCceEEECCCCcCCccCcc-cccCch-hCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccccc
Confidence 45677888888888888776665 677777 7888888888888777778888888888888888887666666888888
Q ss_pred CCeEeccccccccc-CCccccCcccccEEeeecCCCCCc
Q 010856 81 LQGLGLEDNKLEGS-IPDDICHLAELYRLDLDGNKLSGS 118 (499)
Q Consensus 81 L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~ 118 (499)
|++|++++|.+++. .|..|.++++|++|++++|++++.
T Consensus 126 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred ccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 88888888888763 577788888888888888876644
No 51
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.3e-30 Score=250.55 Aligned_cols=226 Identities=19% Similarity=0.265 Sum_probs=182.7
Q ss_pred CCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 4 CKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
.++++.|+|++|.++.+ |. .+..++ +|++|+|++|.++ .+|..|..+++|++|+|++|.++ .+|..+.++++|++
T Consensus 80 ~~~l~~L~L~~n~l~~l-p~-~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQF-PD-QAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp STTCCEEEEESSCCSSC-CS-CGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred ccceeEEEccCCCchhc-Ch-hhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 46788888888888844 44 466677 7888888888888 67777888888888888888888 56777888888888
Q ss_pred EecccccccccCCccccC---------cccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcE
Q 010856 84 LGLEDNKLEGSIPDDICH---------LAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILN 154 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~---------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~ 154 (499)
|++++|++.+..|..+.. +++|++|++++|+++ .+|..+..+++|+.|++++|+++.+|..+..+++|++
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCE
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCE
Confidence 888887777777766543 888888888888888 5667788888888888888888888878888888888
Q ss_pred EEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcC
Q 010856 155 LNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNL 234 (499)
Q Consensus 155 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l 234 (499)
|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|++|++++|++.+.+|..+..+++|+.+++..+.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888877765
Q ss_pred C
Q 010856 235 S 235 (499)
Q Consensus 235 ~ 235 (499)
.
T Consensus 314 ~ 314 (328)
T 4fcg_A 314 A 314 (328)
T ss_dssp C
T ss_pred H
Confidence 5
No 52
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=5.4e-30 Score=260.67 Aligned_cols=259 Identities=28% Similarity=0.410 Sum_probs=155.1
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCC---------
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIP--------- 72 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--------- 72 (499)
.++++|++|++++|.+++..+ +..++ +|++|++++|.+++..+ +..+++|++|++++|.+++...
T Consensus 87 ~~l~~L~~L~l~~n~l~~~~~---~~~l~-~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~ 160 (466)
T 1o6v_A 87 KNLTKLVDILMNNNQIADITP---LANLT-NLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQ 160 (466)
T ss_dssp TTCTTCCEEECCSSCCCCCGG---GTTCT-TCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSE
T ss_pred hccccCCEEECCCCccccChh---hcCCC-CCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccE
Confidence 467777888888877775533 55666 77777777777775533 6777777777777776654211
Q ss_pred ----------ccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCC
Q 010856 73 ----------ITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSV 142 (499)
Q Consensus 73 ----------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 142 (499)
..+.++++|++|++++|.++.. ..+..+++|++|++++|.+++..+ +..+++|+.|++++|+++.+
T Consensus 161 L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 161 LSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp EEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred eecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 1255667777778887777643 346677777777777777775543 55566666666666666665
Q ss_pred CccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCC
Q 010856 143 PLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLI 222 (499)
Q Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 222 (499)
+ .+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..++
T Consensus 237 ~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~ 309 (466)
T 1o6v_A 237 G-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLK 309 (466)
T ss_dssp G-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCT
T ss_pred h-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCC
Confidence 3 35556666666666666655433 5555666666666666654432 5555555555555555554322 45555
Q ss_pred CCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 223 SLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 223 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
+|+.|++++|++++..+ +..+++|+.|++++|++++. +....++.++.+++.+|+
T Consensus 310 ~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 310 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp TCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred CCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCc
Confidence 55555555555554433 44555555555555555543 233334444555555544
No 53
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=9.1e-30 Score=258.99 Aligned_cols=255 Identities=30% Similarity=0.399 Sum_probs=149.8
Q ss_pred CCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCC
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQ 82 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 82 (499)
.+++|++|+|++|.+++..+ +..++ +|++|++++|.+++..+ +.++++|++|++++|.+++..+ +..+++|+
T Consensus 66 ~l~~L~~L~Ls~n~l~~~~~---~~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 137 (466)
T 1o6v_A 66 YLNNLTQINFSNNQLTDITP---LKNLT-KLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 137 (466)
T ss_dssp GCTTCCEEECCSSCCCCCGG---GTTCT-TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hhcCCCEEECCCCccCCchh---hhccc-cCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCC
Confidence 46677777777777765532 55555 67777777777765544 6777777777777777765433 66777777
Q ss_pred eEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcC
Q 010856 83 GLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFL 162 (499)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l 162 (499)
+|++++|.+.+. + .+..+++|++|+++ |.+.+. ..+..+++|+.|++++|.++.++ .+..+++|++|++++|.+
T Consensus 138 ~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 138 RLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQI 211 (466)
T ss_dssp EEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCC
T ss_pred EEECCCCccCCC-h-hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcCCCCh-hhccCCCCCEEEecCCcc
Confidence 777777776643 1 24444444444443 222222 12556666677777777666654 355666666666666666
Q ss_pred CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccc
Q 010856 163 TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASL 242 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 242 (499)
++..+ +..+++|+.|++++|.+++. ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +
T Consensus 212 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~ 283 (466)
T 1o6v_A 212 SDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 283 (466)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--G
T ss_pred ccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--c
Confidence 65433 45566666666666666543 345556666666666666654432 5555666666666666654333 5
Q ss_pred cCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCc
Q 010856 243 EKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNE 280 (499)
Q Consensus 243 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~ 280 (499)
..+++|+.|++++|++++..+ ...+++++.+++.+|.
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 284 AGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp TTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSC
T ss_pred cCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCc
Confidence 555666666666666554333 3344555555555554
No 54
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=3.2e-29 Score=265.04 Aligned_cols=114 Identities=24% Similarity=0.249 Sum_probs=99.9
Q ss_pred CCCcEEEcCCCcC-CCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEe
Q 010856 150 KDILNLNFSSNFL-TSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLN 228 (499)
Q Consensus 150 ~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 228 (499)
++|+.|++++|.+ ....|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 3455555555542 234567788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCccCcccccCC-CCCCEEEccCCcCcccCC
Q 010856 229 LSNNNLSGAIPASLEKL-SYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 229 l~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~ 263 (499)
|++|+|++..|..+..+ ++|+.|++++|++.+...
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999988 689999999999998654
No 55
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.8e-31 Score=254.59 Aligned_cols=244 Identities=17% Similarity=0.201 Sum_probs=143.6
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCc-ccCCcccc-------CCCCCCEEeccCCcCCccCCccc-
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNIS-GGIPEEIS-------NLTNSTIVNLGGNKLNGSIPITL- 75 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~-~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~- 75 (499)
++|++|++++|.+ ..|. .+. ..|+.|++++|.++ ...|..+. ++++|++|+|++|.+++..|..+
T Consensus 43 ~~L~~l~l~~n~l--~~p~-~~~---~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLG-QFT---DIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EECTTHHHHCCTT--CCCH-HHH---HHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred CCceeEeeccccc--ccHH-HHH---HHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 4566666666666 3333 221 23666666666663 23343333 56666666666666666555554
Q ss_pred -cCCCCCCeEecccccccccCCccccCc-----ccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC---CCccc
Q 010856 76 -SKLQKLQGLGLEDNKLEGSIPDDICHL-----AELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS---VPLTF 146 (499)
Q Consensus 76 -~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~~~ 146 (499)
..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..+..|..+++|++|++++|++.. ++..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 6666666666666666655 5555555 666666666666666666666666666666666666543 22222
Q ss_pred --cCCCCCcEEEcCCCcCCCC---CcccccCCCCccEEEccCCcccccCc-ccccCCcCCceeeCcCCcCCCCCCccccC
Q 010856 147 --WNLKDILNLNFSSNFLTSP---LPLEIGNLKVLIGIDFSMNNFSGVIP-TEIGGLKNLEYLFLGYNRLQGSIPDSFGD 220 (499)
Q Consensus 147 --~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~ 220 (499)
..+++|++|++++|.+++. ....+..+++|+.|++++|++++..| ..+..+++|++|++++|+++ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 5566666666666666531 11233455666666666666665443 33445566666666666666 3444443
Q ss_pred CCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcc
Q 010856 221 LISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEG 260 (499)
Q Consensus 221 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 260 (499)
++|+.|++++|++++. |. +..+++|++|++++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5666666666666654 33 6666666666666666653
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=1.4e-28 Score=248.71 Aligned_cols=251 Identities=22% Similarity=0.213 Sum_probs=210.1
Q ss_pred CCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCC
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQ 82 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 82 (499)
++++|++|++++|.+++. | .+..++ +|++|++++|+++++ | +..+++|++|++++|.+++. + +.++++|+
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~--~l~~l~-~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~ 109 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-T--GIEKLT-GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLT 109 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-T--TGGGCT-TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCC
T ss_pred HcCCCCEEEccCCCcccC-h--hhcccC-CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCC
Confidence 578999999999999976 4 467787 899999999999975 3 88999999999999999975 3 88999999
Q ss_pred eEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccC-CCCCCccccCCCCCcEEEcCCCc
Q 010856 83 GLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNK-LTSVPLTFWNLKDILNLNFSSNF 161 (499)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~l~~L~~L~l~~n~ 161 (499)
+|++++|++++. + +..+++|++|++++|++++. .+..+++|+.|++++|+ +..+ .+..+++|++|++++|.
T Consensus 110 ~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 110 YLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp EEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 999999999864 3 88999999999999999975 37889999999999994 5446 47789999999999999
Q ss_pred CCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCccc
Q 010856 162 LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPAS 241 (499)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 241 (499)
++++ + +..+++|+.|++++|++++. .+..+++|++|++++|+++++ | +..+++|+.|++++|++++..+..
T Consensus 182 l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 182 ITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp CCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred ccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 9974 3 78899999999999999876 488899999999999999974 4 888999999999999999876555
Q ss_pred ccCCC-------CCCEEEccCCcCcccCCCCCCCCCccccccCCCcC
Q 010856 242 LEKLS-------YLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNEL 281 (499)
Q Consensus 242 ~~~l~-------~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~ 281 (499)
+..+. +|+.|++++|++.+.+|. ..++.++.+++++|+.
T Consensus 253 l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls~n~~ 298 (457)
T 3bz5_A 253 LSKLTTLHCIQTDLLEIDLTHNTQLIYFQA-EGCRKIKELDVTHNTQ 298 (457)
T ss_dssp CTTCCEEECTTCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCCTTCTT
T ss_pred CCCCCEEeccCCCCCEEECCCCccCCcccc-cccccCCEEECCCCcc
Confidence 54443 455666666666666653 3567888888888864
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=2.4e-28 Score=246.93 Aligned_cols=237 Identities=21% Similarity=0.191 Sum_probs=188.4
Q ss_pred CCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCC
Q 010856 2 SNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKL 81 (499)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 81 (499)
+.+++|++|+|++|.++++ .+..++ +|++|++++|.+++. + +.++++|++|++++|++++. + +..+++|
T Consensus 61 ~~l~~L~~L~Ls~n~l~~~----~~~~l~-~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L 129 (457)
T 3bz5_A 61 EKLTGLTKLICTSNNITTL----DLSQNT-NLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLL 129 (457)
T ss_dssp GGCTTCSEEECCSSCCSCC----CCTTCT-TCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTC
T ss_pred cccCCCCEEEccCCcCCeE----ccccCC-CCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcC
Confidence 5688999999999999986 266777 899999999999975 3 88999999999999999864 3 8899999
Q ss_pred CeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCc
Q 010856 82 QGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNF 161 (499)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~ 161 (499)
++|++++|++++. .+..+++|++|++++|+..+.. .+..+++|+.|++++|+++.+| +..+++|+.|++++|.
T Consensus 130 ~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 130 TYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp CEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--CTTCTTCCEEECCSSC
T ss_pred CEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--cccCCCCCEEECcCCc
Confidence 9999999999875 3788899999999999655444 4778899999999999999887 7788999999999999
Q ss_pred CCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCC-------CCCEEeCCCCcC
Q 010856 162 LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLI-------SLKFLNLSNNNL 234 (499)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-------~L~~L~l~~N~l 234 (499)
+++. .+..+++|+.|++++|++++. | +..+++|+.|++++|++++..+..+..+. +|+.|++++|.+
T Consensus 203 l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~ 276 (457)
T 3bz5_A 203 ITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQ 276 (457)
T ss_dssp CSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTT
T ss_pred CCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCcc
Confidence 9875 478889999999999999874 4 78889999999999999876544444332 334444444444
Q ss_pred CccCcccccCCCCCCEEEccCCcCcccCCC
Q 010856 235 SGAIPASLEKLSYLENLNLSFNKLEGEIPR 264 (499)
Q Consensus 235 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 264 (499)
.+..| +..+++|+.|++++|+..+.+|.
T Consensus 277 ~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 277 LIYFQ--AEGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CCEEE--CTTCTTCCCCCCTTCTTCCEEEC
T ss_pred CCccc--ccccccCCEEECCCCcccceecc
Confidence 43333 35667777788887777665553
No 58
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=3e-30 Score=248.93 Aligned_cols=258 Identities=18% Similarity=0.170 Sum_probs=203.1
Q ss_pred CCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEec
Q 010856 7 LTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGL 86 (499)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 86 (499)
++.++++.+.+...... .+..++ +|++|++++|.+++..|..|..+++|++|+|++|.+++..+ +..+++|++|++
T Consensus 12 l~i~~ls~~~l~~~~~~-~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 12 YKIEKVTDSSLKQALAS-LRQSAW-NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEESCCTTTHHHHHHH-HHTTGG-GCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred eeEeeccccchhhhHHH-HhccCC-CCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 44556666666543332 344445 89999999999998888889999999999999999986554 889999999999
Q ss_pred ccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCC-ccccCCCCCcEEEcCCCcCCCC
Q 010856 87 EDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP-LTFWNLKDILNLNFSSNFLTSP 165 (499)
Q Consensus 87 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~ 165 (499)
++|.+++.. ..++|++|++++|++++..+.. +++|+.|++++|+++.++ ..+..+++|++|++++|.+++.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 999987442 3489999999999998765543 578999999999999864 4777889999999999999887
Q ss_pred Ccccc-cCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccC
Q 010856 166 LPLEI-GNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEK 244 (499)
Q Consensus 166 ~~~~~-~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 244 (499)
.+..+ ..+++|++|++++|.+++.. ....+++|++|++++|++++..+ .+..+++|+.|++++|+++. +|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhc
Confidence 66666 47899999999999998662 33458999999999999996544 58889999999999999994 5677888
Q ss_pred CCCCCEEEccCCcCc-ccCCCC-CCCCCccccccCCCc
Q 010856 245 LSYLENLNLSFNKLE-GEIPRG-GSFGNFSAESFEGNE 280 (499)
Q Consensus 245 l~~L~~L~l~~N~l~-~~~~~~-~~~~~l~~~~l~~N~ 280 (499)
+++|+.|++++|+++ +.+|.. ..++.++.+++.+++
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCch
Confidence 999999999999998 333322 235556666666443
No 59
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.7e-29 Score=243.55 Aligned_cols=242 Identities=22% Similarity=0.224 Sum_probs=210.6
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46677788888876666777788899999999999998888899999999999999999986654 8999999999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP 191 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (499)
+|++++.. ..++|+.|++++|+++.++.. .+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 99998543 348999999999999987643 46899999999999999888899999999999999999998877
Q ss_pred ccc-cCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCC
Q 010856 192 TEI-GGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGN 270 (499)
Q Consensus 192 ~~l-~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 270 (499)
..+ ..+++|++|++++|.+++. .....+++|+.|++++|++++..+ .+..+++|+.|++++|++++..+....++.
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~ 238 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQN 238 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTT
T ss_pred HHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccchhhHhhcCCC
Confidence 776 4789999999999999966 233458999999999999996555 488999999999999999976555567789
Q ss_pred ccccccCCCcCCCCC
Q 010856 271 FSAESFEGNELLCGS 285 (499)
Q Consensus 271 l~~~~l~~N~~~c~~ 285 (499)
++.+++.+|++.|++
T Consensus 239 L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 239 LEHFDLRGNGFHCGT 253 (317)
T ss_dssp CCEEECTTCCCBHHH
T ss_pred CCEEEccCCCccCcC
Confidence 999999999998864
No 60
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.96 E-value=5.9e-28 Score=228.17 Aligned_cols=208 Identities=26% Similarity=0.303 Sum_probs=126.7
Q ss_pred CCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecc
Q 010856 56 NSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLG 135 (499)
Q Consensus 56 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 135 (499)
+|++|++++|.+++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 44444554444444444444444455555555554444444444455555555555555554444455555555555555
Q ss_pred ccCCCCCCc-cccCCCCCcEEEcCCCcCCCC-CcccccCCCCccEEEccCCcccccCcccccCCcCCc----eeeCcCCc
Q 010856 136 SNKLTSVPL-TFWNLKDILNLNFSSNFLTSP-LPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLE----YLFLGYNR 209 (499)
Q Consensus 136 ~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----~L~L~~n~ 209 (499)
+|+++.++. .+..+++|++|++++|.+++. .|..+..+++|+.|++++|++++..+..+..+++|+ +|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 555555433 355555566666666655543 355666666666777777766666666666666666 78888888
Q ss_pred CCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCC
Q 010856 210 LQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR 264 (499)
Q Consensus 210 l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 264 (499)
+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|++++..+.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 87665555544 4788888888888877777778888888888888888876654
No 61
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.3e-29 Score=255.38 Aligned_cols=241 Identities=20% Similarity=0.196 Sum_probs=201.7
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 79999999999999888999999999999999999987655 899999999999999998543 33899999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCC-CccccCCCCCcEEEcCCCcCCCCCccccc-CCCCccEEEccCCccccc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSV-PLTFWNLKDILNLNFSSNFLTSPLPLEIG-NLKVLIGIDFSMNNFSGV 189 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~ 189 (499)
+|.+++..+. .+++|+.|++++|.++.+ |..+..+++|+.|++++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999977654 357899999999999985 55788899999999999999987777776 789999999999999876
Q ss_pred CcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcc-cCCC-CCC
Q 010856 190 IPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEG-EIPR-GGS 267 (499)
Q Consensus 190 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~-~~~ 267 (499)
. .+..+++|+.|+|++|.+++..+ .+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++.+ .+|. ...
T Consensus 185 ~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 K--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp E--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred c--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 3 34468999999999999997655 48899999999999999995 56678899999999999999983 3322 233
Q ss_pred CCCccccccC-------CCcCCCCCC
Q 010856 268 FGNFSAESFE-------GNELLCGSP 286 (499)
Q Consensus 268 ~~~l~~~~l~-------~N~~~c~~~ 286 (499)
++.+..+.+. +|++.|.++
T Consensus 261 l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 261 NQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp CHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred CCCCcEEeccccccccCCCcccccCC
Confidence 4555555554 778777664
No 62
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.96 E-value=7.8e-28 Score=227.37 Aligned_cols=223 Identities=19% Similarity=0.177 Sum_probs=198.9
Q ss_pred EEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEeccc
Q 010856 9 LIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLED 88 (499)
Q Consensus 9 ~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 88 (499)
..+..+..++.++.. ++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++
T Consensus 11 ~~~c~~~~l~~ip~~-----l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 11 TYQCMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp EEECTTSCCSSCCSS-----SCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred eEEecCCCccccCCC-----CCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 567777777754332 345899999999999988888999999999999999999988888999999999999999
Q ss_pred ccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC--CCccccCCCCCcEEEcCCCcCCCCC
Q 010856 89 NKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS--VPLTFWNLKDILNLNFSSNFLTSPL 166 (499)
Q Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (499)
|.+++..+..|.++++|++|++++|.+.+..+..+..+++|++|++++|+++. +|..+..+++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 99998888899999999999999999998888789999999999999999998 6889999999999999999999887
Q ss_pred cccccCCCCcc----EEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCcc
Q 010856 167 PLEIGNLKVLI----GIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGA 237 (499)
Q Consensus 167 ~~~~~~l~~L~----~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 237 (499)
+..+..+++|+ .|++++|.+++..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|+++..
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred HHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 77887777776 8999999999777666654 4899999999999988888889999999999999999843
No 63
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.5e-29 Score=255.23 Aligned_cols=222 Identities=24% Similarity=0.238 Sum_probs=191.6
Q ss_pred CCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCee
Q 010856 53 NLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIV 132 (499)
Q Consensus 53 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 132 (499)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34589999999999998888899999999999999999986654 8899999999999999985432 3899999
Q ss_pred eccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCccccc-CCcCCceeeCcCCcCC
Q 010856 133 SLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIG-GLKNLEYLFLGYNRLQ 211 (499)
Q Consensus 133 ~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~L~~n~l~ 211 (499)
++++|.++.++.. .+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+. .+++|++|+|++|.++
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 9999999987643 468899999999999998888899999999999999999988888776 7899999999999998
Q ss_pred CCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCCC
Q 010856 212 GSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 212 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~~ 286 (499)
+.. .+..+++|+.|+|++|.+++.++. +..+++|+.|++++|.+++.++....++.+..+++.+|++.|++.
T Consensus 183 ~~~--~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 183 DVK--GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp EEE--CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred ccc--ccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 763 344689999999999999976554 889999999999999999866665667889999999999998764
No 64
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-29 Score=244.41 Aligned_cols=247 Identities=21% Similarity=0.226 Sum_probs=207.1
Q ss_pred cccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCc-cCCcccc-------CCCCCCeEecccccccccCCc
Q 010856 26 VGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNG-SIPITLS-------KLQKLQGLGLEDNKLEGSIPD 97 (499)
Q Consensus 26 ~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~ 97 (499)
+.... +|++|++++|.+ .+|..+... |+.|+|++|.++. ..|..+. ++++|++|+|++|++++..|.
T Consensus 39 ~~~~~-~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGR-SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEE-ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCC-CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34445 799999999999 567666544 9999999999953 4455444 789999999999999988888
Q ss_pred cc--cCcccccEEeeecCCCCCcCCccccCC-----ccCCeeeccccCCCCCC-ccccCCCCCcEEEcCCCcCCCC--Cc
Q 010856 98 DI--CHLAELYRLDLDGNKLSGSLPACFSNL-----TSLRIVSLGSNKLTSVP-LTFWNLKDILNLNFSSNFLTSP--LP 167 (499)
Q Consensus 98 ~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~--~~ 167 (499)
.+ ..+++|++|++++|++++. |..+..+ ++|++|++++|+++.++ ..+..+++|++|++++|++.+. .+
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8999999999999999987 7777777 89999999999999976 7899999999999999998753 22
Q ss_pred ccc--cCCCCccEEEccCCccccc---CcccccCCcCCceeeCcCCcCCCCCC-ccccCCCCCCEEeCCCCcCCccCccc
Q 010856 168 LEI--GNLKVLIGIDFSMNNFSGV---IPTEIGGLKNLEYLFLGYNRLQGSIP-DSFGDLISLKFLNLSNNNLSGAIPAS 241 (499)
Q Consensus 168 ~~~--~~l~~L~~L~l~~n~l~~~---~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~N~l~~~~~~~ 241 (499)
..+ ..+++|++|++++|++++. ....+..+++|++|++++|++++..| ..+..+++|+.|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 333 8899999999999999842 22445678999999999999998764 56777899999999999999 55665
Q ss_pred ccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCC
Q 010856 242 LEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELL 282 (499)
Q Consensus 242 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~ 282 (499)
+. ++|+.|++++|++++. |....++.++.+++.+|++.
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred cc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 55 8999999999999977 66777889999999999864
No 65
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=4.3e-27 Score=223.45 Aligned_cols=203 Identities=25% Similarity=0.199 Sum_probs=134.1
Q ss_pred ccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCC
Q 010856 51 ISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLR 130 (499)
Q Consensus 51 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 130 (499)
+.++++++++++++|.++.+ |..+. ++++.|+|++|.+++..+..|..+++|++|++++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 56778888888888888744 33332 5788888888888777777788888888888888888754332 5677777
Q ss_pred eeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcC
Q 010856 131 IVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRL 210 (499)
Q Consensus 131 ~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 210 (499)
.|++++|+++.+|..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 77777777777776666777777777777777666556666666666666666666655555555666666666666666
Q ss_pred CCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCc
Q 010856 211 QGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 211 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
++..+..|..+++|+.|++++|+++ .+|..+..+++|+.+++++|++.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 6555555555666666666666665 33334444445555555544444
No 66
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.9e-26 Score=215.76 Aligned_cols=183 Identities=27% Similarity=0.326 Sum_probs=101.3
Q ss_pred CCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcC
Q 010856 80 KLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFS 158 (499)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~ 158 (499)
+|++|++++|+++...+..|..+++|++|++++|+++...+..|..+++|++|++++|+++.++. .+..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 34444444444443333344444444444444444444333444444445555555554444332 23444555555555
Q ss_pred CCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccC
Q 010856 159 SNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAI 238 (499)
Q Consensus 159 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 238 (499)
+|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 55555544555555666666666666666555555666666666666666666655556666667777777777666655
Q ss_pred cccccCCCCCCEEEccCCcCcccC
Q 010856 239 PASLEKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 239 ~~~~~~l~~L~~L~l~~N~l~~~~ 262 (499)
+..|..+++|+.|++++|++.+..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSS
T ss_pred HHHhccccCCCEEEecCCCeeCCC
Confidence 556666666666666666665443
No 67
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.4e-26 Score=216.32 Aligned_cols=202 Identities=26% Similarity=0.288 Sum_probs=140.2
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+.+.+++++++++. +|..+. ++|++|+|++|+++...+..|.++++|++|++++|.++...+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 45666666666663 333332 456666666666665555566666666666666666665555556666667777777
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccC
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVI 190 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (499)
+|++++..+..|..+++|++|++++|+++.++. .+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 777666666666667777777777777766543 3566777777777777777666666777778888888888877776
Q ss_pred cccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCc
Q 010856 191 PTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSG 236 (499)
Q Consensus 191 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 236 (499)
+..|..+++|++|++++|++++..+..|..+++|+.|++++|++..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 6677788888888888888887766677888888888888888763
No 68
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1.6e-26 Score=219.41 Aligned_cols=206 Identities=27% Similarity=0.267 Sum_probs=123.6
Q ss_pred ccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcE
Q 010856 75 LSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILN 154 (499)
Q Consensus 75 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~ 154 (499)
+.++++++++++++|.++. +|..+. ++++.|++++|.+++..+..|..+++|+.|++++|+++.++.. ..+++|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCE
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCE
Confidence 4455566666666666653 333332 4566666666666655555666666666666666666665433 45666666
Q ss_pred EEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcC
Q 010856 155 LNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNL 234 (499)
Q Consensus 155 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l 234 (499)
|++++|.++. +|..+..+++|+.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|+.|++++|++
T Consensus 82 L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 6666666653 444555666666666666666655555666666666666666666655555566666666666666666
Q ss_pred CccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCC
Q 010856 235 SGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 235 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~ 285 (499)
++..+..|..+++|+.|++++|+++...+.......++.+++.+|||.|+|
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 655555556666666666666666644433344445566666666666655
No 69
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1.1e-25 Score=227.23 Aligned_cols=248 Identities=29% Similarity=0.374 Sum_probs=156.6
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|++++|.+++ .| .+..++ +|++|++++|++++ +|..+ ++|++|++++|++++ .| .+.++++|++|
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~-~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L 200 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSS-FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAI 200 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCT-TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCC-CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEE
Confidence 578888888888876 34 366676 78888888888875 34332 477888888888775 34 47777888888
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCC
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTS 164 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (499)
++++|++++ +|.. .++|++|++++|.++ .+| .+..+++|+.|++++|+++.+|.. +++|+.|++++|.+++
T Consensus 201 ~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 201 YADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp ECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC
T ss_pred ECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc
Confidence 888877774 3322 246777777777777 344 366777777777777777766642 2566666666666665
Q ss_pred CCcccccCCCCccEEEccCCccccc--Cccc-------------ccCC-cCCceeeCcCCcCCCCCCccccCCCCCCEEe
Q 010856 165 PLPLEIGNLKVLIGIDFSMNNFSGV--IPTE-------------IGGL-KNLEYLFLGYNRLQGSIPDSFGDLISLKFLN 228 (499)
Q Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~-------------l~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 228 (499)
+ |.. .++|+.|++++|++++. .|.. +..+ ++|++|++++|++++ +|.. +++|+.|+
T Consensus 272 l-~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 272 L-PEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLI 343 (454)
T ss_dssp C-CCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred c-Ccc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEE
Confidence 2 221 24555555555555441 1111 1123 589999999999986 4443 58899999
Q ss_pred CCCCcCCccCcccccCCCCCCEEEccCCcCcc--cCCCCC-CC-------------CCccccccCCCcCCC
Q 010856 229 LSNNNLSGAIPASLEKLSYLENLNLSFNKLEG--EIPRGG-SF-------------GNFSAESFEGNELLC 283 (499)
Q Consensus 229 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~-~~-------------~~l~~~~l~~N~~~c 283 (499)
+++|++++ +|. .+++|+.|++++|++++ .+|... .+ ++++.+++++|+...
T Consensus 344 L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 344 ASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred CCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 99999995 444 47899999999999998 555442 22 678889999998654
No 70
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=5e-25 Score=222.41 Aligned_cols=182 Identities=23% Similarity=0.299 Sum_probs=84.0
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|++++|.++++ |. .. + +|++|++++|+++++. . + .++|++|++++|++++ .| .|.++++|++|
T Consensus 91 ~~L~~L~l~~n~l~~l-p~-~~---~-~L~~L~l~~n~l~~l~-~-~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 91 PHLESLVASCNSLTEL-PE-LP---Q-SLKSLLVDNNNLKALS-D-L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp TTCSEEECCSSCCSSC-CC-CC---T-TCCEEECCSSCCSCCC-S-C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred CCCCEEEccCCcCCcc-cc-cc---C-CCcEEECCCCccCccc-C-C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 4566666666666653 22 11 2 4555555555544321 1 0 1345555555555553 23 35555555555
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCc-------------------c
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-------------------T 145 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------------~ 145 (499)
++++|++++ +|.. ..+|++|++++|++++ .| .+..+++|+.|++++|+++.+|. .
T Consensus 159 ~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~~lp~ 232 (454)
T 1jl5_A 159 DVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPE 232 (454)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCC
T ss_pred ECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCCcccc
Confidence 555555543 2221 1244555555555543 22 34444444444444444444432 2
Q ss_pred ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCC
Q 010856 146 FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQG 212 (499)
Q Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 212 (499)
+..+++|++|++++|++++. |. .+++|+.|++++|++++. |.. .++|++|++++|++++
T Consensus 233 ~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~l-~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 233 LQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTDL-PEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSE
T ss_pred cCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCccccc-Ccc---cCcCCEEECcCCccCc
Confidence 44455555555555555432 11 124455555555555432 221 2455555555555553
No 71
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=4.8e-25 Score=229.35 Aligned_cols=240 Identities=23% Similarity=0.209 Sum_probs=120.5
Q ss_pred CCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEe
Q 010856 6 SLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLG 85 (499)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 85 (499)
+++.|++++|.++.+ |. .+. ++|++|++++|.++.+ |. .+++|++|+|++|+++.+ |. .+++|++|+
T Consensus 41 ~l~~L~ls~n~L~~l-p~-~l~---~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~ 107 (622)
T 3g06_A 41 GNAVLNVGESGLTTL-PD-CLP---AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTSL-PV---LPPGLLELS 107 (622)
T ss_dssp CCCEEECCSSCCSCC-CS-CCC---TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEE
T ss_pred CCcEEEecCCCcCcc-Ch-hhC---CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEE
Confidence 355566666666533 22 111 2566666666655532 22 345555566665555532 22 445555555
Q ss_pred cccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccc-----------------cC
Q 010856 86 LEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTF-----------------WN 148 (499)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-----------------~~ 148 (499)
+++|.+++. |. .+++|+.|++++|+++.. |.. +++|++|++++|+++.+|..+ ..
T Consensus 108 Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~ 179 (622)
T 3g06_A 108 IFSNPLTHL-PA---LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPML 179 (622)
T ss_dssp ECSCCCCCC-CC---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCC
T ss_pred CcCCcCCCC-CC---CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCccc
Confidence 555555532 21 334444555555544432 211 244444444444444433211 22
Q ss_pred CCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEe
Q 010856 149 LKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLN 228 (499)
Q Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 228 (499)
+++|+.|++++|.++++. . .+++|+.|++++|.++.. |. .+++|+.|++++|.++++ | ..+++|+.|+
T Consensus 180 ~~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~ 247 (622)
T 3g06_A 180 PSGLQELSVSDNQLASLP-T---LPSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSL-P---VLPSELKELM 247 (622)
T ss_dssp CTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCC-C---ccchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcC-C---CCCCcCcEEE
Confidence 355566666666655422 1 124455555555555432 21 235666666666666642 3 3446667777
Q ss_pred CCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCC
Q 010856 229 LSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELL 282 (499)
Q Consensus 229 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~ 282 (499)
+++|+|+... . .+++|+.|++++|+|+...+....++++..+++.+|++.
T Consensus 248 Ls~N~L~~lp-~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 248 VSGNRLTSLP-M---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp CCSSCCSCCC-C---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCCCCCcCC-c---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCC
Confidence 7777666432 2 456667777777777633323344566666667776643
No 72
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.94 E-value=4.8e-26 Score=210.26 Aligned_cols=196 Identities=17% Similarity=0.217 Sum_probs=126.9
Q ss_pred CCCEEeccCCcCCccCCccccCCCCCCeEeccccc-ccccCCccccCcccccEEeeec-CCCCCcCCccccCCccCCeee
Q 010856 56 NSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNK-LEGSIPDDICHLAELYRLDLDG-NKLSGSLPACFSNLTSLRIVS 133 (499)
Q Consensus 56 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 133 (499)
+|++|++++|+++++.+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |+++...+..|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666555566666666666666665 6655555666666666666666 666665556666666677777
Q ss_pred ccccCCCCCCccccCCCCCc---EEEcCCC-cCCCCCcccccCCCCcc-EEEccCCcccccCcccccCCcCCceeeCcCC
Q 010856 134 LGSNKLTSVPLTFWNLKDIL---NLNFSSN-FLTSPLPLEIGNLKVLI-GIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN 208 (499)
Q Consensus 134 L~~n~l~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 208 (499)
+++|+++.+|. +..+++|+ +|++++| .++++.+..|..+++|+ .|++++|+++.+.+..+.. ++|++|++++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 77776666664 55566665 6677666 66665555666677777 7777777766444444444 66777777777
Q ss_pred c-CCCCCCccccCC-CCCCEEeCCCCcCCccCcccccCCCCCCEEEccCC
Q 010856 209 R-LQGSIPDSFGDL-ISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN 256 (499)
Q Consensus 209 ~-l~~~~~~~l~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 256 (499)
+ ++++.+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4 666656666666 7777777777777644333 4556666766654
No 73
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=1.7e-26 Score=217.52 Aligned_cols=221 Identities=23% Similarity=0.257 Sum_probs=178.4
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
++..+++..+.+.+. ..+..+++|+.|++++|.++.. ..+..+++|++|++++|.+++. ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 456667777776644 2356678888888888887732 3477788888888888888753 467888888888888
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCcc-ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccC
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT-FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVI 190 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (499)
+|.+++..+..|..+++|++|++++|+++.++.. +..+++|++|++++|.+++..+..+..+++|+.|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 8888877777788888888888888888886554 677888888888888888877777888889999999999988877
Q ss_pred cccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC
Q 010856 191 PTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG 265 (499)
Q Consensus 191 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 265 (499)
+..+..+++|++|++++|++++..+..+..+++|+.|++++|++.+ .+++|+.++++.|.++|.+|..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCT
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCc
Confidence 7778888999999999999988888788889999999999998773 3567888899999999888765
No 74
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=2.2e-25 Score=209.87 Aligned_cols=225 Identities=25% Similarity=0.303 Sum_probs=192.2
Q ss_pred CEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecc
Q 010856 8 TLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLE 87 (499)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 87 (499)
..+++..+.+.+.. ....++ +|+.|++++|.++.. ..+..+++|++|++++|.+++. ..+..+++|++|+++
T Consensus 22 ~~l~l~~~~~~~~~---~~~~l~-~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 22 IKANLKKKSVTDAV---TQNELN-SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHTCSCTTSEE---CHHHHT-TCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHhcCccccccc---cccccc-ceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 34455666666543 344556 899999999998843 3588899999999999999853 478899999999999
Q ss_pred cccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCcc-ccCCCCCcEEEcCCCcCCCCC
Q 010856 88 DNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT-FWNLKDILNLNFSSNFLTSPL 166 (499)
Q Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~ 166 (499)
+|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|+++.++.. +..+++|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 9999988888889999999999999999988888899999999999999999987654 678999999999999999888
Q ss_pred cccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCC
Q 010856 167 PLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLS 246 (499)
Q Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 246 (499)
+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.+ .+++|+.|+++.|.+++.+|..++.++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccC
Confidence 8888999999999999999999888889999999999999998874 356799999999999999998887665
Q ss_pred C
Q 010856 247 Y 247 (499)
Q Consensus 247 ~ 247 (499)
.
T Consensus 247 ~ 247 (272)
T 3rfs_A 247 P 247 (272)
T ss_dssp G
T ss_pred C
Confidence 3
No 75
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=1e-28 Score=251.04 Aligned_cols=276 Identities=17% Similarity=0.140 Sum_probs=169.8
Q ss_pred CCCCCCEEECcCCCCCccC----ChhccccccccccEEEcccCCCcccCCccc-cCCC----CCCEEeccCCcCCc----
Q 010856 3 NCKSLTLIYLSNNPLDGIL----PKTSVGNLSHSLEDFRMYNCNISGGIPEEI-SNLT----NSTIVNLGGNKLNG---- 69 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~----~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~-~~l~----~L~~L~L~~n~l~~---- 69 (499)
.+++|++|+|++|.+++.. +. .+..++ +|++|++++|.+++..+..+ ..++ +|++|+|++|.++.
T Consensus 26 ~~~~L~~L~L~~~~l~~~~~~~l~~-~l~~~~-~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 26 LLQQCQVVRLDDCGLTEARCKDISS-ALRVNP-ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHTTCSEEEEESSCCCHHHHHHHHH-HHHTCT-TCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred hcCCccEEEccCCCCCHHHHHHHHH-HHHhCC-CcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 4577888888888776432 22 344455 78888888887765444333 2344 58888888887774
Q ss_pred cCCccccCCCCCCeEecccccccccCCcccc-----CcccccEEeeecCCCCCcC----CccccCCccCCeeeccccCCC
Q 010856 70 SIPITLSKLQKLQGLGLEDNKLEGSIPDDIC-----HLAELYRLDLDGNKLSGSL----PACFSNLTSLRIVSLGSNKLT 140 (499)
Q Consensus 70 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~ 140 (499)
..+..+..+++|++|++++|.++...+..+. ..++|++|++++|++++.. +..+..+++|+.|++++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 3366677777888888888877644333222 2456777888777777533 344555677777777777766
Q ss_pred CC-Ccccc-----CCCCCcEEEcCCCcCCCC----CcccccCCCCccEEEccCCcccccC-----cccccCCcCCceeeC
Q 010856 141 SV-PLTFW-----NLKDILNLNFSSNFLTSP----LPLEIGNLKVLIGIDFSMNNFSGVI-----PTEIGGLKNLEYLFL 205 (499)
Q Consensus 141 ~~-~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~l~~l~~L~~L~L 205 (499)
.. +..+. ..++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 52 11111 245777777777777653 2445566677777777777766432 222234677777777
Q ss_pred cCCcCCCC----CCccccCCCCCCEEeCCCCcCCccCcccccC-----CCCCCEEEccCCcCcccC----CCC-CCCCCc
Q 010856 206 GYNRLQGS----IPDSFGDLISLKFLNLSNNNLSGAIPASLEK-----LSYLENLNLSFNKLEGEI----PRG-GSFGNF 271 (499)
Q Consensus 206 ~~n~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~----~~~-~~~~~l 271 (499)
++|.+++. .+..+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+++.. +.. ...+++
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 77777643 3455566777777777777776443333322 257777777777766431 111 123566
Q ss_pred cccccCCCc
Q 010856 272 SAESFEGNE 280 (499)
Q Consensus 272 ~~~~l~~N~ 280 (499)
+.+++++|.
T Consensus 344 ~~L~Ls~n~ 352 (461)
T 1z7x_W 344 LELQISNNR 352 (461)
T ss_dssp CEEECCSSB
T ss_pred cEEEccCCc
Confidence 667776664
No 76
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.9e-24 Score=224.89 Aligned_cols=226 Identities=22% Similarity=0.178 Sum_probs=162.6
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeE
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGL 84 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 84 (499)
++|++|+|++|.++.+.+ .++ +|++|+|++|+++++ |. .+++|++|+|++|.+++..+ .+++|+.|
T Consensus 61 ~~L~~L~L~~N~l~~lp~-----~l~-~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L 126 (622)
T 3g06_A 61 AHITTLVIPDNNLTSLPA-----LPP-ELRTLEVSGNQLTSL-PV---LPPGLLELSIFSNPLTHLPA----LPSGLCKL 126 (622)
T ss_dssp TTCSEEEECSCCCSCCCC-----CCT-TCCEEEECSCCCSCC-CC---CCTTCCEEEECSCCCCCCCC----CCTTCCEE
T ss_pred CCCcEEEecCCCCCCCCC-----cCC-CCCEEEcCCCcCCcC-CC---CCCCCCEEECcCCcCCCCCC----CCCCcCEE
Confidence 467777777777775433 233 777777777777743 33 55677777777777764322 34556666
Q ss_pred ecccccccccCCccccCcccccEEeeecCCCCCcCC--ccc--------------cCCccCCeeeccccCCCCCCccccC
Q 010856 85 GLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLP--ACF--------------SNLTSLRIVSLGSNKLTSVPLTFWN 148 (499)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~--------------~~l~~L~~L~L~~n~l~~~~~~~~~ 148 (499)
++++|+++. +|.. +++|++|++++|++++... ..+ ..+++|+.|++++|+++.+|..
T Consensus 127 ~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~~--- 199 (622)
T 3g06_A 127 WIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTL--- 199 (622)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCC---
T ss_pred ECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCCc---
Confidence 666666553 2221 2555555555555553211 111 2237899999999999988754
Q ss_pred CCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEe
Q 010856 149 LKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLN 228 (499)
Q Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 228 (499)
+++|+.|++++|.++.+. . .+++|+.|++++|.++++ | ..+++|+.|++++|.++.+ |. .+++|+.|+
T Consensus 200 ~~~L~~L~L~~N~l~~l~-~---~~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~ 267 (622)
T 3g06_A 200 PSELYKLWAYNNRLTSLP-A---LPSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTSL-PM---LPSGLLSLS 267 (622)
T ss_dssp CTTCCEEECCSSCCSSCC-C---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEE
T ss_pred cchhhEEECcCCcccccC-C---CCCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCcC-Cc---ccccCcEEe
Confidence 488999999999998643 2 358899999999999964 3 5568999999999999954 44 678999999
Q ss_pred CCCCcCCccCcccccCCCCCCEEEccCCcCcccCCC
Q 010856 229 LSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR 264 (499)
Q Consensus 229 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 264 (499)
+++|+|+ .+|..+..+++|+.|++++|++++..|.
T Consensus 268 Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 268 VYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 9999999 5678899999999999999999976554
No 77
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=2e-27 Score=233.58 Aligned_cols=251 Identities=19% Similarity=0.178 Sum_probs=194.8
Q ss_pred EEECcCCCCCccCChhccccccccccEEEcccCCCcccCC----ccccCCC-CCCEEeccCCcCCccCCccccCC-----
Q 010856 9 LIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIP----EEISNLT-NSTIVNLGGNKLNGSIPITLSKL----- 78 (499)
Q Consensus 9 ~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l----- 78 (499)
.+++++|++++..|. ++. .+.+|++|+|++|.+++..+ .+|..++ +|++|+|++|.++...+..+..+
T Consensus 2 ~~~ls~n~~~~~~~~-~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 79 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIP 79 (362)
T ss_dssp EEECCCCTTCCHHHH-HHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccccccccchHHHHH-HHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccC
Confidence 468899999987775 444 45479999999999998777 7888898 89999999999998777766664
Q ss_pred CCCCeEecccccccccCCcccc----Cc-ccccEEeeecCCCCCcCCccc----cC-CccCCeeeccccCCCC-----CC
Q 010856 79 QKLQGLGLEDNKLEGSIPDDIC----HL-AELYRLDLDGNKLSGSLPACF----SN-LTSLRIVSLGSNKLTS-----VP 143 (499)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~L~~n~l~~~~~~~~----~~-l~~L~~L~L~~n~l~~-----~~ 143 (499)
++|++|+|++|.+++..+..+. .+ ++|++|++++|++++..+..+ .. .++|++|++++|++++ ++
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 8999999999999877666444 34 899999999999987665544 33 3699999999999984 34
Q ss_pred ccccCCC-CCcEEEcCCCcCCCCCcccc----cCC-CCccEEEccCCcccccC----cccccC-CcCCceeeCcCCcCCC
Q 010856 144 LTFWNLK-DILNLNFSSNFLTSPLPLEI----GNL-KVLIGIDFSMNNFSGVI----PTEIGG-LKNLEYLFLGYNRLQG 212 (499)
Q Consensus 144 ~~~~~l~-~L~~L~l~~n~l~~~~~~~~----~~l-~~L~~L~l~~n~l~~~~----~~~l~~-l~~L~~L~L~~n~l~~ 212 (499)
..+..++ +|++|++++|.+++..+..+ ..+ ++|+.|++++|.+++.. +..+.. .++|++|+|++|.+++
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 4455565 89999999999987665443 344 58999999999998643 334444 4589999999999987
Q ss_pred CCC----ccccCCCCCCEEeCCCCcCCccC-------cccccCCCCCCEEEccCCcCccc
Q 010856 213 SIP----DSFGDLISLKFLNLSNNNLSGAI-------PASLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 213 ~~~----~~l~~l~~L~~L~l~~N~l~~~~-------~~~~~~l~~L~~L~l~~N~l~~~ 261 (499)
..+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.||+++|++...
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 654 33567789999999999855433 33567788899999999998754
No 78
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=3.7e-25 Score=204.26 Aligned_cols=199 Identities=20% Similarity=0.214 Sum_probs=176.0
Q ss_pred ccccccEEEcccCCCcccCCccccCCCCCCEEeccCCc-CCccCCccccCCCCCCeEeccc-ccccccCCccccCccccc
Q 010856 29 LSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNK-LNGSIPITLSKLQKLQGLGLED-NKLEGSIPDDICHLAELY 106 (499)
Q Consensus 29 l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~ 106 (499)
++.+|++|++++|+++++.+.+|.++++|++|++++|+ ++.+.+..|.++++|++|++++ |+++...+..|.++++|+
T Consensus 29 ~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 29 LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred CCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 34589999999999998888899999999999999997 9888888899999999999998 999988888899999999
Q ss_pred EEeeecCCCCCcCCccccCCccCC---eeecccc-CCCCCCc-cccCCCCCc-EEEcCCCcCCCCCcccccCCCCccEEE
Q 010856 107 RLDLDGNKLSGSLPACFSNLTSLR---IVSLGSN-KLTSVPL-TFWNLKDIL-NLNFSSNFLTSPLPLEIGNLKVLIGID 180 (499)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~-~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~ 180 (499)
+|++++|++++ .|. |..+++|+ .|++++| +++.++. .+..+++|+ +|++++|.++.+.+..|.. ++|+.|+
T Consensus 109 ~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEE
T ss_pred EEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEE
Confidence 99999999997 454 88888898 9999999 9999775 488899999 9999999999766666666 8999999
Q ss_pred ccCCc-ccccCcccccCC-cCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCc
Q 010856 181 FSMNN-FSGVIPTEIGGL-KNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNN 233 (499)
Q Consensus 181 l~~n~-l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~ 233 (499)
+++|+ +++..+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 99995 998888889999 9999999999999965444 67789999998763
No 79
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=5.2e-28 Score=245.87 Aligned_cols=275 Identities=18% Similarity=0.153 Sum_probs=203.9
Q ss_pred CCCEEECcCCCCCcc----CChhccccccccccEEEcccCCCcccCCcccc-----CCCCCCEEeccCCcCCccC----C
Q 010856 6 SLTLIYLSNNPLDGI----LPKTSVGNLSHSLEDFRMYNCNISGGIPEEIS-----NLTNSTIVNLGGNKLNGSI----P 72 (499)
Q Consensus 6 ~L~~L~L~~n~l~~~----~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~----~ 72 (499)
+|++|+|++|.+++. .+. .+..++ +|++|++++|.+++..+..+. ..++|++|++++|+++... +
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~-~l~~~~-~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSS-TLRTLP-TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHH-HTTSCT-TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHH-HHccCC-ceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 799999999998853 244 677777 899999999998765444333 3568999999999988643 4
Q ss_pred ccccCCCCCCeEecccccccccCCcccc-----CcccccEEeeecCCCCCc----CCccccCCccCCeeeccccCCCCC-
Q 010856 73 ITLSKLQKLQGLGLEDNKLEGSIPDDIC-----HLAELYRLDLDGNKLSGS----LPACFSNLTSLRIVSLGSNKLTSV- 142 (499)
Q Consensus 73 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~- 142 (499)
..+..+++|++|++++|.++...+..+. ..++|++|++++|.++.. ++..+..+++|++|++++|+++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 5566778999999999998755444443 256899999999998864 356677788999999999988762
Q ss_pred -----CccccCCCCCcEEEcCCCcCCCC----CcccccCCCCccEEEccCCcccccCcccccC-----CcCCceeeCcCC
Q 010856 143 -----PLTFWNLKDILNLNFSSNFLTSP----LPLEIGNLKVLIGIDFSMNNFSGVIPTEIGG-----LKNLEYLFLGYN 208 (499)
Q Consensus 143 -----~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L~~L~L~~n 208 (499)
+..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++..+..+.. .++|++|++++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 22233578999999999988763 4556667889999999999887654444432 368999999999
Q ss_pred cCCCC----CCccccCCCCCCEEeCCCCcCCccCcccccC-----CCCCCEEEccCCcCcc----cCCCC-CCCCCcccc
Q 010856 209 RLQGS----IPDSFGDLISLKFLNLSNNNLSGAIPASLEK-----LSYLENLNLSFNKLEG----EIPRG-GSFGNFSAE 274 (499)
Q Consensus 209 ~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~----~~~~~-~~~~~l~~~ 274 (499)
.+++. .+..+..+++|+.|++++|++++..+..+.. .++|+.|++++|++++ .+|.. ...++++.+
T Consensus 324 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 324 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred CCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 88865 3455677789999999999887655544432 6789999999998884 33322 346778888
Q ss_pred ccCCCcCC
Q 010856 275 SFEGNELL 282 (499)
Q Consensus 275 ~l~~N~~~ 282 (499)
++++|+..
T Consensus 404 ~l~~N~i~ 411 (461)
T 1z7x_W 404 DLSNNCLG 411 (461)
T ss_dssp ECCSSSCC
T ss_pred ECCCCCCC
Confidence 88888753
No 80
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.93 E-value=1e-25 Score=216.50 Aligned_cols=222 Identities=17% Similarity=0.188 Sum_probs=122.7
Q ss_pred ccEEEcccCCCcccCCc---cccCCCCCCEEeccCCcCCccCCccc--cCCCCCCeEecccccccccCC----ccccCcc
Q 010856 33 LEDFRMYNCNISGGIPE---EISNLTNSTIVNLGGNKLNGSIPITL--SKLQKLQGLGLEDNKLEGSIP----DDICHLA 103 (499)
Q Consensus 33 L~~L~l~~n~i~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l~ 103 (499)
++.|.+.++.++..... .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 55666666555421100 11223456666666666666666555 666666666666666664333 2334566
Q ss_pred cccEEeeecCCCCCcCCccccCCccCCeeeccccCCCC---CC--ccccCCCCCcEEEcCCCcCCCCCcc---cccCCCC
Q 010856 104 ELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTS---VP--LTFWNLKDILNLNFSSNFLTSPLPL---EIGNLKV 175 (499)
Q Consensus 104 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~--~~~~~l~~L~~L~l~~n~l~~~~~~---~~~~l~~ 175 (499)
+|++|++++|++++..+..|..+++|++|++++|++.. ++ ..+..+++|++|++++|+++..... .+..+++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQ 225 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCC
Confidence 66666666666666666666666666666666666543 22 1224556666666666666532111 2345566
Q ss_pred ccEEEccCCcccccCcccccCC---cCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEE
Q 010856 176 LIGIDFSMNNFSGVIPTEIGGL---KNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLN 252 (499)
Q Consensus 176 L~~L~l~~n~l~~~~~~~l~~l---~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 252 (499)
|++|++++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|+.|++++|++++. |. +..+++|+.|+
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLT 300 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEE
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEE
Confidence 6666666666665555444444 46666666666666 3344332 5666666666666643 22 45556666666
Q ss_pred ccCCcCc
Q 010856 253 LSFNKLE 259 (499)
Q Consensus 253 l~~N~l~ 259 (499)
+++|+++
T Consensus 301 L~~N~l~ 307 (310)
T 4glp_A 301 LDGNPFL 307 (310)
T ss_dssp CSSTTTS
T ss_pred CcCCCCC
Confidence 6666655
No 81
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=3e-25 Score=213.20 Aligned_cols=225 Identities=16% Similarity=0.172 Sum_probs=185.6
Q ss_pred CCCEEECcCCCCCccCChh--ccccccccccEEEcccCCCcccCCccc--cCCCCCCEEeccCCcCCccCC----ccccC
Q 010856 6 SLTLIYLSNNPLDGILPKT--SVGNLSHSLEDFRMYNCNISGGIPEEI--SNLTNSTIVNLGGNKLNGSIP----ITLSK 77 (499)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~--~~~~l~~~L~~L~l~~n~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~ 77 (499)
.++.|.+.++.++...... ....++ +|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYS-RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHS-CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccC-ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4677888877775321110 112234 69999999999999999888 899999999999999997554 34567
Q ss_pred CCCCCeEecccccccccCCccccCcccccEEeeecCCCCCc---C-CccccCCccCCeeeccccCCCCCCcc----ccCC
Q 010856 78 LQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGS---L-PACFSNLTSLRIVSLGSNKLTSVPLT----FWNL 149 (499)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~---~-~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~l 149 (499)
+++|++|+|++|++.+..+..|..+++|++|+|++|++.+. . +..+..+++|++|++++|+++.++.. +..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988889999999999999999998642 2 23347889999999999999876652 5678
Q ss_pred CCCcEEEcCCCcCCCCCcccccCC---CCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCE
Q 010856 150 KDILNLNFSSNFLTSPLPLEIGNL---KVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKF 226 (499)
Q Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 226 (499)
++|++|++++|.+++..|..+..+ ++|++|++++|+++. +|..+. ++|++|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998877777766 699999999999994 566553 8999999999999965 33 788899999
Q ss_pred EeCCCCcCCc
Q 010856 227 LNLSNNNLSG 236 (499)
Q Consensus 227 L~l~~N~l~~ 236 (499)
|++++|++++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 82
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=8.1e-25 Score=209.75 Aligned_cols=194 Identities=24% Similarity=0.347 Sum_probs=107.2
Q ss_pred cCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCe
Q 010856 52 SNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRI 131 (499)
Q Consensus 52 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 131 (499)
..+++|++|++++|.++.. + .+..+++|++|++++|.+++..+ +..+++|++|++++|++++. ..+..+++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 3445555555555555432 2 34555555555555555553322 55555555555555555532 23555555555
Q ss_pred eeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCC
Q 010856 132 VSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQ 211 (499)
Q Consensus 132 L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 211 (499)
|++++|+++.++. +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.++
T Consensus 112 L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 112 LDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp EECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 5555555555543 5555566666666665554332 5555666666666666654332 556666666666666665
Q ss_pred CCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcc
Q 010856 212 GSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEG 260 (499)
Q Consensus 212 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 260 (499)
+..+ +..+++|+.|++++|++++.. .+..+++|+.|++++|++++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 4322 556666666666666666443 25666666666666666654
No 83
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=2.5e-24 Score=206.35 Aligned_cols=208 Identities=19% Similarity=0.330 Sum_probs=178.0
Q ss_pred ECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEeccccc
Q 010856 11 YLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNK 90 (499)
Q Consensus 11 ~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 90 (499)
.+..+.+++... ...++ +|++|++++|.++.. + .+..+++|++|++++|.+++..+ +..+++|++|++++|+
T Consensus 25 ~l~~~~~~~~~~---~~~l~-~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 25 AAGKSNVTDTVT---QADLD-GITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HTTCSSTTSEEC---HHHHH-TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HhCCCCcCceec---HHHcC-CcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 445555655433 33466 899999999999864 4 68899999999999999986555 8999999999999999
Q ss_pred ccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccc
Q 010856 91 LEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEI 170 (499)
Q Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 170 (499)
+++. ..+..+++|++|++++|++++.. .+..+++|+.|++++|+++.++. +..+++|++|++++|.+++..+ +
T Consensus 97 l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 97 LKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp CSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--h
Confidence 9864 46899999999999999999653 38899999999999999999875 8899999999999999997544 8
Q ss_pred cCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCcc
Q 010856 171 GNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGA 237 (499)
Q Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 237 (499)
..+++|+.|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|++++.
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 899999999999999987644 889999999999999999664 489999999999999999853
No 84
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=4.9e-26 Score=221.40 Aligned_cols=249 Identities=21% Similarity=0.215 Sum_probs=149.7
Q ss_pred CCEEECcCCCCCccCChhccccc--cccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCcc-CCccccCCCCCCe
Q 010856 7 LTLIYLSNNPLDGILPKTSVGNL--SHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGS-IPITLSKLQKLQG 83 (499)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~~l--~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~ 83 (499)
++.+++++|.+.. . .+..+ + +++.|++++|.+.+..+. +..+++|++|++++|.+++. .+..+..+++|++
T Consensus 49 ~~~l~l~~~~~~~---~-~~~~~~~~-~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 49 WQTLDLTGKNLHP---D-VTGRLLSQ-GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp SSEEECTTCBCCH---H-HHHHHHHT-TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred heeeccccccCCH---H-HHHhhhhc-cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 5667777766652 2 33333 3 677777777777655544 44567777777777776644 5555666777777
Q ss_pred EecccccccccCCccccCcccccEEeeecC-CCCCc-CCccccCCccCCeeecccc-CCCC--CCccccCCC-CCcEEEc
Q 010856 84 LGLEDNKLEGSIPDDICHLAELYRLDLDGN-KLSGS-LPACFSNLTSLRIVSLGSN-KLTS--VPLTFWNLK-DILNLNF 157 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~--~~~~~~~l~-~L~~L~l 157 (499)
|++++|.+++..+..+..+++|++|++++| .+++. .+..+..+++|++|++++| .++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 777777766656666666777777777777 45532 3444566677777777777 6664 455566666 7777777
Q ss_pred CCC--cCC-CCCcccccCCCCccEEEccCCc-ccccCcccccCCcCCceeeCcCCc-CCCCCCccccCCCCCCEEeCCCC
Q 010856 158 SSN--FLT-SPLPLEIGNLKVLIGIDFSMNN-FSGVIPTEIGGLKNLEYLFLGYNR-LQGSIPDSFGDLISLKFLNLSNN 232 (499)
Q Consensus 158 ~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~N 232 (499)
++| .++ ...+..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 776 343 2234445566677777777776 555555566666777777777664 22222224566667777777766
Q ss_pred cCCccCcccccCCCCCCEEEccCCcCcccCCC
Q 010856 233 NLSGAIPASLEKLSYLENLNLSFNKLEGEIPR 264 (499)
Q Consensus 233 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 264 (499)
++......+. .++..|++++|++++..|.
T Consensus 283 -i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 283 -VPDGTLQLLK--EALPHLQINCSHFTTIARP 311 (336)
T ss_dssp -SCTTCHHHHH--HHSTTSEESCCCSCCTTCS
T ss_pred -cCHHHHHHHH--hhCcceEEecccCccccCC
Confidence 3322212221 2244455666666665554
No 85
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.2e-23 Score=195.68 Aligned_cols=177 Identities=25% Similarity=0.285 Sum_probs=96.1
Q ss_pred ccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeec
Q 010856 33 LEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDG 112 (499)
Q Consensus 33 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 112 (499)
.++++++++.++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++
T Consensus 16 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 4445555555442 222222 3455555555555544444455555555555555555544444455555555555555
Q ss_pred CCCCCcCCccccCCccCCeeeccccCCCCCCcc-ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc
Q 010856 113 NKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT-FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP 191 (499)
Q Consensus 113 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (499)
|++++..+..|..+++|++|++++|+++.++.. +..+++|++|++++|.++++.+..|..+++|+.|++++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 555544445555555555555555555554433 3455556666666666655555556666666666666666665555
Q ss_pred ccccCCcCCceeeCcCCcCCC
Q 010856 192 TEIGGLKNLEYLFLGYNRLQG 212 (499)
Q Consensus 192 ~~l~~l~~L~~L~L~~n~l~~ 212 (499)
..|..+++|+.|++++|++..
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCT
T ss_pred HHHhCCCCCCEEEeeCCceeC
Confidence 566666666666666666654
No 86
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1e-26 Score=230.74 Aligned_cols=237 Identities=23% Similarity=0.253 Sum_probs=175.2
Q ss_pred ccccccccccEEEcccCCCcccCC----ccccCCCCCCEEeccCCcCC---ccCCccc-------cCCCCCCeEeccccc
Q 010856 25 SVGNLSHSLEDFRMYNCNISGGIP----EEISNLTNSTIVNLGGNKLN---GSIPITL-------SKLQKLQGLGLEDNK 90 (499)
Q Consensus 25 ~~~~l~~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~L~~n~l~---~~~~~~~-------~~l~~L~~L~L~~n~ 90 (499)
.+..++ +|++|+|++|.++...+ ..+..+++|++|+|++|.+. +..|..+ ..+++|++|+|++|.
T Consensus 27 ~l~~~~-~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 27 VLLEDD-SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHCS-CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCC-CccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 455566 79999999998886533 34678889999999886443 3344433 678889999999998
Q ss_pred ccc----cCCccccCcccccEEeeecCCCCCcCCcccc----CC---------ccCCeeeccccCCCC--CC---ccccC
Q 010856 91 LEG----SIPDDICHLAELYRLDLDGNKLSGSLPACFS----NL---------TSLRIVSLGSNKLTS--VP---LTFWN 148 (499)
Q Consensus 91 l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~~L~L~~n~l~~--~~---~~~~~ 148 (499)
++. .++..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+++. ++ ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 886 3566778888899999999988744333333 33 788899999988873 44 45667
Q ss_pred CCCCcEEEcCCCcCCC-----CCcccccCCCCccEEEccCCccc----ccCcccccCCcCCceeeCcCCcCCCC----CC
Q 010856 149 LKDILNLNFSSNFLTS-----PLPLEIGNLKVLIGIDFSMNNFS----GVIPTEIGGLKNLEYLFLGYNRLQGS----IP 215 (499)
Q Consensus 149 l~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~----~~ 215 (499)
+++|++|++++|.++. ..+..+..+++|+.|+|++|.++ ...|..+..+++|++|+|++|.+++. ++
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 8888899998888873 23336778888888888888885 45667778888888888888888764 34
Q ss_pred cccc--CCCCCCEEeCCCCcCCc----cCcccc-cCCCCCCEEEccCCcCcccC
Q 010856 216 DSFG--DLISLKFLNLSNNNLSG----AIPASL-EKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 216 ~~l~--~l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~ 262 (499)
..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 5553 37888888888888886 356555 56788888888888887543
No 87
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.7e-23 Score=194.50 Aligned_cols=180 Identities=24% Similarity=0.302 Sum_probs=104.1
Q ss_pred CCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecc
Q 010856 56 NSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLG 135 (499)
Q Consensus 56 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 135 (499)
..++++++++.++. +|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 34556666666653 232222 355555555555555555555555555555555555555444445555555555555
Q ss_pred ccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCC
Q 010856 136 SNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIP 215 (499)
Q Consensus 136 ~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 215 (499)
+|+++ +..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+
T Consensus 92 ~n~l~-----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 92 NNQLA-----------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp TSCCC-----------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccc-----------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 55444 4444445555555555555555555555555666666666666666665555
Q ss_pred ccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCccc
Q 010856 216 DSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 216 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 261 (499)
..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5666666667777777766666666666667777777777776654
No 88
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=2.9e-26 Score=227.37 Aligned_cols=236 Identities=21% Similarity=0.215 Sum_probs=191.6
Q ss_pred CCCCCCEEECcCCCCCccCChh---ccccccccccEEEcccCCC---cccCCccc-------cCCCCCCEEeccCCcCCc
Q 010856 3 NCKSLTLIYLSNNPLDGILPKT---SVGNLSHSLEDFRMYNCNI---SGGIPEEI-------SNLTNSTIVNLGGNKLNG 69 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~---~~~~l~~~L~~L~l~~n~i---~~~~~~~~-------~~l~~L~~L~L~~n~l~~ 69 (499)
.+++|++|+|++|.+++..+.. .+..++ +|++|+|++|.+ ++.+|..+ ..+++|++|+|++|.++.
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKK-DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCT-TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCC-CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 5789999999999998764431 355677 899999999644 44555554 789999999999999987
Q ss_pred ----cCCccccCCCCCCeEecccccccccCCccc----cCc---------ccccEEeeecCCCCC-cCC---ccccCCcc
Q 010856 70 ----SIPITLSKLQKLQGLGLEDNKLEGSIPDDI----CHL---------AELYRLDLDGNKLSG-SLP---ACFSNLTS 128 (499)
Q Consensus 70 ----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l---------~~L~~L~L~~n~l~~-~~~---~~~~~l~~ 128 (499)
.++..+..+++|++|+|++|.++...+..+ ..+ ++|++|++++|+++. ..+ ..+..+++
T Consensus 109 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 188 (386)
T 2ca6_A 109 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 188 (386)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCC
Confidence 356678899999999999999975444433 334 899999999999973 333 35677899
Q ss_pred CCeeeccccCCCC------CCccccCCCCCcEEEcCCCcCC----CCCcccccCCCCccEEEccCCccccc----Ccccc
Q 010856 129 LRIVSLGSNKLTS------VPLTFWNLKDILNLNFSSNFLT----SPLPLEIGNLKVLIGIDFSMNNFSGV----IPTEI 194 (499)
Q Consensus 129 L~~L~L~~n~l~~------~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l 194 (499)
|+.|++++|+++. ++..+..+++|+.|+|++|.++ ..++..+..+++|+.|+|++|.+++. ++..+
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l 268 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAF 268 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHH
T ss_pred cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHH
Confidence 9999999999983 3447889999999999999996 45677888999999999999999865 45556
Q ss_pred c--CCcCCceeeCcCCcCCC----CCCccc-cCCCCCCEEeCCCCcCCccCc
Q 010856 195 G--GLKNLEYLFLGYNRLQG----SIPDSF-GDLISLKFLNLSNNNLSGAIP 239 (499)
Q Consensus 195 ~--~l~~L~~L~L~~n~l~~----~~~~~l-~~l~~L~~L~l~~N~l~~~~~ 239 (499)
. .+++|++|+|++|.+++ .++..+ ..+++|+.|++++|++++..+
T Consensus 269 ~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 269 SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred hhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 3 38999999999999997 366666 668999999999999997663
No 89
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=5.7e-23 Score=200.71 Aligned_cols=199 Identities=14% Similarity=0.108 Sum_probs=106.4
Q ss_pred CEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCcc-CCccccCCCCCCe-Ee
Q 010856 8 TLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGS-IPITLSKLQKLQG-LG 85 (499)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~-L~ 85 (499)
++++.++++++.+ |. . ++.++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+.+|.++++|++ +.
T Consensus 12 ~~v~C~~~~Lt~i-P~-~---l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEI-PS-D---LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSC-CT-T---CCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCcc-Cc-C---cCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 4566666666644 32 1 233666677777766665556666666777777766665443 3345666666554 44
Q ss_pred cccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccc-cCCCCCCc-cccCC-CCCcEEEcCCCcC
Q 010856 86 LEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGS-NKLTSVPL-TFWNL-KDILNLNFSSNFL 162 (499)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~-~~~~l-~~L~~L~l~~n~l 162 (499)
+++|+++.+.+..|..+++|++|++++|+++...+..+....++..|++.+ +++..++. .+..+ ..++.|++++|+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 455666656566666666666666666666655555555555555566543 34554433 23332 2345555555555
Q ss_pred CCCCcccccCCCCccEEEccC-CcccccCcccccCCcCCceeeCcCCcCCC
Q 010856 163 TSPLPLEIGNLKVLIGIDFSM-NNFSGVIPTEIGGLKNLEYLFLGYNRLQG 212 (499)
Q Consensus 163 ~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 212 (499)
+.+.+..| ...+|+.|++++ |.++.+.+..|.++++|++|++++|+|+.
T Consensus 167 ~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 167 QEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp CEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC
T ss_pred cCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc
Confidence 54333222 223444444442 34443333444445555555555555543
No 90
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.6e-25 Score=218.39 Aligned_cols=247 Identities=20% Similarity=0.201 Sum_probs=196.8
Q ss_pred EEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCC----ccccCCC-CCCeEecccccccccCCccccCc-----cc
Q 010856 35 DFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIP----ITLSKLQ-KLQGLGLEDNKLEGSIPDDICHL-----AE 104 (499)
Q Consensus 35 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~ 104 (499)
.+++++|.+++.+|..+...++|++|+|++|.++...+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999888877777789999999999997776 6788888 99999999999998877777765 99
Q ss_pred ccEEeeecCCCCCcCCccc----cCC-ccCCeeeccccCCCCCCc-----cccC-CCCCcEEEcCCCcCCCCCccc----
Q 010856 105 LYRLDLDGNKLSGSLPACF----SNL-TSLRIVSLGSNKLTSVPL-----TFWN-LKDILNLNFSSNFLTSPLPLE---- 169 (499)
Q Consensus 105 L~~L~L~~n~l~~~~~~~~----~~l-~~L~~L~L~~n~l~~~~~-----~~~~-l~~L~~L~l~~n~l~~~~~~~---- 169 (499)
|++|+|++|++++..+..+ ..+ ++|+.|++++|+++..+. .+.. .++|++|++++|.+++.....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997766644 444 899999999999988553 2334 369999999999998644433
Q ss_pred ccCCC-CccEEEccCCcccccCccccc----CC-cCCceeeCcCCcCCCCC----CccccC-CCCCCEEeCCCCcCCccC
Q 010856 170 IGNLK-VLIGIDFSMNNFSGVIPTEIG----GL-KNLEYLFLGYNRLQGSI----PDSFGD-LISLKFLNLSNNNLSGAI 238 (499)
Q Consensus 170 ~~~l~-~L~~L~l~~n~l~~~~~~~l~----~l-~~L~~L~L~~n~l~~~~----~~~l~~-l~~L~~L~l~~N~l~~~~ 238 (499)
+..++ +|++|++++|++++..+..+. .+ ++|++|+|++|.+++.. +..+.. .++|+.|++++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34555 999999999999987765544 44 59999999999998643 344544 469999999999998765
Q ss_pred c----ccccCCCCCCEEEccCCcCcccCC--------CCCCCCCccccccCCCcC
Q 010856 239 P----ASLEKLSYLENLNLSFNKLEGEIP--------RGGSFGNFSAESFEGNEL 281 (499)
Q Consensus 239 ~----~~~~~l~~L~~L~l~~N~l~~~~~--------~~~~~~~l~~~~l~~N~~ 281 (499)
+ ..+..+++|+.|++++|.+.+..+ .....+.+..+++++|+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l 296 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcC
Confidence 5 445778999999999999553322 223456678889999874
No 91
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.90 E-value=4.6e-25 Score=208.93 Aligned_cols=135 Identities=18% Similarity=0.169 Sum_probs=107.2
Q ss_pred hhcccccccccCCcceEEEEEeC------CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG------DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+ ..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EE
Confidence 56888999999999999999853 47889999998765555678999999999999999999999998743 44
Q ss_pred eeeecccC-CCccccccc-----------------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEE
Q 010856 435 LCLFHHSS-ASASASLVS-----------------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVI 490 (499)
Q Consensus 435 ~~l~~~~~-~~~~~~l~~-----------------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~ 490 (499)
++++||+. |++.+.++. .+.....++.|||+||+|||+ |+||.|+|++.++.+|++
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~ 170 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG 170 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEEC
Confidence 56777775 455444432 223344567999999999876 899999999999999999
Q ss_pred EEEEeec
Q 010856 491 CFVFEIL 497 (499)
Q Consensus 491 ~f~~~~~ 497 (499)
|||+++.
T Consensus 171 DFGla~~ 177 (299)
T 4asz_A 171 DFGMSRD 177 (299)
T ss_dssp CCSCHHH
T ss_pred Cccccee
Confidence 9999864
No 92
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.90 E-value=8.4e-25 Score=210.00 Aligned_cols=136 Identities=19% Similarity=0.185 Sum_probs=104.8
Q ss_pred hhcccccccccCCcceEEEEEeC------CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG------DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.+|.+.+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|...+ ..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EE
Confidence 56788899999999999999853 47899999998765555788999999999999999999999997643 44
Q ss_pred eeeecccCCC-ccccccc-------------------cccccccccccccccceeecc------CCCcccEEEeeCCCeE
Q 010856 435 LCLFHHSSAS-ASASLVS-------------------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVE 488 (499)
Q Consensus 435 ~~l~~~~~~~-~~~~l~~-------------------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~ 488 (499)
++++||+.++ +.+.++. .+.....++.|||+||+|||+ |+||.|||++.++.+|
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEE
Confidence 5677777554 4333322 122234557899999999765 8999999999999999
Q ss_pred EEEEEEeecc
Q 010856 489 VICFVFEILL 498 (499)
Q Consensus 489 ~~~f~~~~~~ 498 (499)
++|||+++.+
T Consensus 199 i~DFGla~~~ 208 (329)
T 4aoj_A 199 IGDFGMSRDI 208 (329)
T ss_dssp ECCCC-----
T ss_pred Ecccccceec
Confidence 9999998754
No 93
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=5.3e-23 Score=200.92 Aligned_cols=223 Identities=17% Similarity=0.129 Sum_probs=183.9
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcc-cCCccccCCCCCCE-EeccCCcCCccCCccccCCCCCC
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISG-GIPEEISNLTNSTI-VNLGGNKLNGSIPITLSKLQKLQ 82 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~ 82 (499)
+++++|+|++|+|+.+.+. .|.+++ +|++|+|++|++.+ +.+.+|.++++|++ +.+++|+++.+.|..|..+++|+
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~-~f~~l~-~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~ 107 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKG-AFSGFG-DLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQ 107 (350)
T ss_dssp TTCSEEEEESCCCSEECTT-SSTTCT-TCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCC
T ss_pred CCCCEEEccCCcCCCcCHH-HHcCCC-CCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccc
Confidence 5799999999999977665 788898 99999999999865 44567999998876 66778999988899999999999
Q ss_pred eEecccccccccCCccccCcccccEEeeec-CCCCCcCCccccCCc-cCCeeeccccCCCCCCccccCCCCCcEEEcCC-
Q 010856 83 GLGLEDNKLEGSIPDDICHLAELYRLDLDG-NKLSGSLPACFSNLT-SLRIVSLGSNKLTSVPLTFWNLKDILNLNFSS- 159 (499)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~- 159 (499)
+|++++|++....+..+....++..|++.+ +++....+..|..+. .++.|++++|+|+.++...+...+|++|++++
T Consensus 108 ~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~ 187 (350)
T 4ay9_X 108 YLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDN 187 (350)
T ss_dssp EEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTC
T ss_pred cccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccC
Confidence 999999999977777777888899999976 678877777787775 68999999999999998888888999999975
Q ss_pred CcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCc
Q 010856 160 NFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNN 233 (499)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~ 233 (499)
|.++.+.+..|..+++|+.|++++|+|+.+.+..|.++++|+.+++ +.++ ..| .+..+++|+.++++++.
T Consensus 188 n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 188 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred CcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 7788777778999999999999999999776665555544444433 2344 444 47788889999887653
No 94
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.89 E-value=1.7e-24 Score=201.71 Aligned_cols=137 Identities=15% Similarity=0.187 Sum_probs=106.8
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|++.+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|++++++++|||||++++++...+ ..+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ 89 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EII 89 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEE
Confidence 47899999999999999999995 579999999997653 233567999999999999999999999987743 445
Q ss_pred eeecccCCCccccccccccc----cccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSASASASLVSSLTL----SRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~~~~~----~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++||++|++.+.+...... .+.++.|++.||+|||+ |+||+||+++.++.++++|||+++..
T Consensus 90 ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 162 (275)
T 3hyh_A 90 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeec
Confidence 67788888877766543333 34446899999999876 89999999999999999999998753
No 95
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.89 E-value=1.8e-24 Score=207.53 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=111.6
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeec
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFH 439 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~ 439 (499)
..|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+.+ ..++++|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 4588999999999999999996 579999999998766566678999999999999999999999998744 4456788
Q ss_pred ccCCCccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 440 HSSASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 440 ~~~~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
|+.|+.+..+.. .+...+.++.||+.||+|||+ |+||+|||++.++.+|++|||+++.+
T Consensus 152 y~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 220 (346)
T 4fih_A 152 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220 (346)
T ss_dssp CCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceec
Confidence 886654433322 223344556899999999976 89999999999999999999998754
No 96
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.89 E-value=1.8e-24 Score=207.78 Aligned_cols=137 Identities=12% Similarity=0.107 Sum_probs=104.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yi 100 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYI 100 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEE
Confidence 36799999999999999999996 579999999997654 234577999999999999999999999987643 3455
Q ss_pred eecccC-CCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 437 LFHHSS-ASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 437 l~~~~~-~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++||+. |++.+.+... +.....++.||+.||+|||+ |+||+|||++.++.+|++|||+++.+
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence 677775 5555555322 22234456899999999876 89999999999999999999999865
No 97
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.89 E-value=2e-24 Score=205.47 Aligned_cols=136 Identities=18% Similarity=0.126 Sum_probs=105.2
Q ss_pred hhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 361 DEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
+++.+.+.||+|+||+||+|++ .+++.||||+++... ....++|.+|+.++++++|||||+++|+|...+ .
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ--P 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC--E
Confidence 4567778999999999999985 246789999997554 344678999999999999999999999997633 3
Q ss_pred eeeeecccCC-Ccccccccc--------------------ccccccccccccccceeecc------CCCcccEEEeeCCC
Q 010856 434 CLCLFHHSSA-SASASLVSS--------------------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG 486 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~~--------------------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~ 486 (499)
..+++||+.+ ++.+.+... +.....++.|||+||+|||+ |+||.|||+++++.
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCC
Confidence 4556777754 544444221 11233457899999999876 89999999999999
Q ss_pred eEEEEEEEeecc
Q 010856 487 VEVICFVFEILL 498 (499)
Q Consensus 487 ~~~~~f~~~~~~ 498 (499)
+|++|||+++.+
T Consensus 184 ~Ki~DFGlar~~ 195 (308)
T 4gt4_A 184 VKISDLGLFREV 195 (308)
T ss_dssp EEECCSCCBCGG
T ss_pred EEECCcccceec
Confidence 999999998754
No 98
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=9.3e-25 Score=212.33 Aligned_cols=233 Identities=15% Similarity=0.158 Sum_probs=193.3
Q ss_pred CCCCEEECcCCCCCccCChhccccccccccEEEcccCCCccc-CCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGG-IPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
++++.|++++|.+.+..+. +..++ +|++|++++|.+++. .+..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~-~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~ 146 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPF-RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVR 146 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCB-CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSE
T ss_pred ccceEEEcCCccccccchh--hccCC-CCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCE
Confidence 7899999999999988765 44577 899999999999865 7778999999999999999998878888999999999
Q ss_pred Eecccc-ccccc-CCccccCcccccEEeeecC-CCCCc-CCccccCCc-cCCeeecccc--CCCC--CCccccCCCCCcE
Q 010856 84 LGLEDN-KLEGS-IPDDICHLAELYRLDLDGN-KLSGS-LPACFSNLT-SLRIVSLGSN--KLTS--VPLTFWNLKDILN 154 (499)
Q Consensus 84 L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~L~~n--~l~~--~~~~~~~l~~L~~ 154 (499)
|++++| .+++. .+..+..+++|++|++++| .+++. .+..+..++ +|++|++++| .++. ++..+..+++|++
T Consensus 147 L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 147 LNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp EECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred EECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 999999 67753 5566888999999999999 88854 466678899 9999999999 5553 6777888999999
Q ss_pred EEcCCCc-CCCCCcccccCCCCccEEEccCCc-ccccCcccccCCcCCceeeCcCCcCCCCCCccccCC-CCCCEEeCCC
Q 010856 155 LNFSSNF-LTSPLPLEIGNLKVLIGIDFSMNN-FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDL-ISLKFLNLSN 231 (499)
Q Consensus 155 L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~l~~ 231 (499)
|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|++|++++| ++.. .+..+ .++..|++++
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~ 302 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINC 302 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEec
Confidence 9999999 777777788999999999999995 33332336788999999999999 5433 33333 2366677999
Q ss_pred CcCCccCcccccC
Q 010856 232 NNLSGAIPASLEK 244 (499)
Q Consensus 232 N~l~~~~~~~~~~ 244 (499)
|++++..|..+..
T Consensus 303 n~l~~~~~~~~~~ 315 (336)
T 2ast_B 303 SHFTTIARPTIGN 315 (336)
T ss_dssp CCSCCTTCSSCSS
T ss_pred ccCccccCCcccc
Confidence 9999888877654
No 99
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.89 E-value=2.6e-24 Score=203.26 Aligned_cols=137 Identities=13% Similarity=0.132 Sum_probs=111.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+ ..+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~y 108 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLY 108 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEE
Confidence 35799999999999999999996 579999999997643 344678999999999999999999999988744 345
Q ss_pred eeecccC-CCcccccccccc----ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSS-ASASASLVSSLT----LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~-~~~~~~l~~~~~----~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++||+. |++.+.+..... ..+.++.||+.||+|||+ |+||+|||++.++.+|++|||+++.+
T Consensus 109 ivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~ 182 (311)
T 4aw0_A 109 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182 (311)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence 5677764 555555543333 344456899999999876 89999999999999999999999865
No 100
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.89 E-value=5.6e-24 Score=209.19 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=112.0
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeec
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFH 439 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~ 439 (499)
..|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||+++++|...+ ..++++|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEe
Confidence 5699999999999999999996 579999999998776666778999999999999999999999998744 4556778
Q ss_pred ccCCCccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 440 HSSASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 440 ~~~~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
|+.|+.+..+.. .+.....++.||+.||+|||+ |+||+|||++.++.+|++|||+++.+
T Consensus 229 y~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~ 297 (423)
T 4fie_A 229 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297 (423)
T ss_dssp CCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceEC
Confidence 886654443322 223344556899999999876 89999999999999999999998754
No 101
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.88 E-value=1.1e-23 Score=199.68 Aligned_cols=139 Identities=16% Similarity=0.173 Sum_probs=104.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEcccc------
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVITF------ 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~------ 431 (499)
.++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++...+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45799999999999999999996 5799999999976543 335679999999999999999999999865332
Q ss_pred ----ceeeeeecccCCC-cccccccccc-------ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEE
Q 010856 432 ----TVCLCLFHHSSAS-ASASLVSSLT-------LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFV 493 (499)
Q Consensus 432 ----~~~~~l~~~~~~~-~~~~l~~~~~-------~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~ 493 (499)
...++++||+.|+ +.+.+..... ....++.|+++||+|||+ |+||+||+++.++.+|++|||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence 1235567777554 4333332221 123456899999999766 899999999999999999999
Q ss_pred Eeecc
Q 010856 494 FEILL 498 (499)
Q Consensus 494 ~~~~~ 498 (499)
+++.+
T Consensus 164 la~~~ 168 (299)
T 4g31_A 164 LVTAM 168 (299)
T ss_dssp CC---
T ss_pred cceec
Confidence 98764
No 102
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=4e-22 Score=179.76 Aligned_cols=162 Identities=23% Similarity=0.225 Sum_probs=83.3
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+|++|++++|+++++.+..|..+++|++|++++|+++...+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444445555555555555555554444444555555555555555544433344444555555555
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP 191 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (499)
+|++++..+..|.. +++|++|++++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 109 ~N~l~~~~~~~~~~-----------------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 109 TNQLQSLPDGVFDK-----------------------LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp SSCCCCCCTTTTTT-----------------------CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred CCcCcccCHhHhcc-----------------------CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec---
Confidence 55444444444444 4555555555555554444445555555555555554432
Q ss_pred ccccCCcCCceeeCcCCcCCCCCCccccCCCC
Q 010856 192 TEIGGLKNLEYLFLGYNRLQGSIPDSFGDLIS 223 (499)
Q Consensus 192 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 223 (499)
.+++|++|+++.|++++.+|..++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 2345666666666666666655555443
No 103
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=7e-22 Score=178.16 Aligned_cols=179 Identities=25% Similarity=0.281 Sum_probs=133.8
Q ss_pred EEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccC
Q 010856 59 IVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNK 138 (499)
Q Consensus 59 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 138 (499)
.++++++.++.+ |..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 11 ~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 445555555422 2222 2356666666666665555556666666666666666666555566777777777777777
Q ss_pred CCCCCcc-ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCcc
Q 010856 139 LTSVPLT-FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDS 217 (499)
Q Consensus 139 l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 217 (499)
++.++.. +..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-----
Confidence 7776543 5677888888888888887777778999999999999999998888789999999999999998764
Q ss_pred ccCCCCCCEEeCCCCcCCccCcccccCCCC
Q 010856 218 FGDLISLKFLNLSNNNLSGAIPASLEKLSY 247 (499)
Q Consensus 218 l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 247 (499)
.+++|+.|+++.|++++.+|..++.++.
T Consensus 163 --~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 --TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp --CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred --CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4578999999999999999998887765
No 104
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.3e-23 Score=199.06 Aligned_cols=134 Identities=19% Similarity=0.233 Sum_probs=105.1
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.+++.+.+.||+|+||+||+|++++ .||||+++... ....+.|.+|++++++++|||||+++|++... . .+++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--~-~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD--N-LAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--S-CEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC--e-EEEE
Confidence 4567788999999999999998743 69999997543 23457899999999999999999999987542 2 3456
Q ss_pred ecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 438 FHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+||+.| ++.+.++. .+.....++.|||+||+|||+ |+||.|||+++++.+|++|||+++.+
T Consensus 110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 777754 44444432 222344557899999999977 89999999999999999999999764
No 105
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=1.1e-21 Score=186.27 Aligned_cols=170 Identities=25% Similarity=0.342 Sum_probs=88.2
Q ss_pred CCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEc
Q 010856 78 LQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNF 157 (499)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l 157 (499)
+++|+.|++++|.+... ..+..+++|++|++++|++++..+ +..+++|+.|++++|+++.++. +..+++|++|++
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L 119 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSL 119 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEEC
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh-hccCCCCCEEEC
Confidence 34444444444444322 123444444444444444443322 4444444444444444444332 444555555555
Q ss_pred CCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCcc
Q 010856 158 SSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGA 237 (499)
Q Consensus 158 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 237 (499)
++|.+++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 55555442 2344555555555555555543 345566666666666666664433 66666666666666666643
Q ss_pred CcccccCCCCCCEEEccCCcCcc
Q 010856 238 IPASLEKLSYLENLNLSFNKLEG 260 (499)
Q Consensus 238 ~~~~~~~l~~L~~L~l~~N~l~~ 260 (499)
+ .+..+++|+.|++++|+++.
T Consensus 194 -~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 -R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -G-GGTTCTTCSEEEEEEEEEEC
T ss_pred -h-hhccCCCCCEEECcCCcccC
Confidence 2 35666666666666666653
No 106
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.86 E-value=6.3e-23 Score=192.86 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=103.8
Q ss_pred ccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcc--ccceeeeee
Q 010856 364 SENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVI--TFTVCLCLF 438 (499)
Q Consensus 364 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~--~~~~~~~l~ 438 (499)
...+.||+|+||+||+|+. .+++.||+|++.... ....+.|.+|++++++++|||||+++++|... .....++++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5667899999999999996 468999999997654 23456799999999999999999999998652 122345577
Q ss_pred cccCC-Ccccccccc----ccccccccccccccceeecc--------CCCcccEEEee-CCCeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFVL-EPGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~~-~~~~~~~~f~~~~~~ 498 (499)
||+.| ++.+.+... +.....++.||+.||+|||+ |+||+|||+++ ++.+|++|||++++.
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 77755 444444332 22344556899999998865 78999999985 678999999998753
No 107
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.5e-21 Score=199.05 Aligned_cols=180 Identities=27% Similarity=0.294 Sum_probs=92.9
Q ss_pred CCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecc
Q 010856 56 NSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLG 135 (499)
Q Consensus 56 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 135 (499)
+|+.|+|++|.+++ +|..+ +++|++|+|++|+++ .+| ..+++|++|++++|++++ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555554 23222 245555555555555 233 234555555555555554 333 332 55556666
Q ss_pred ccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCC
Q 010856 136 SNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIP 215 (499)
Q Consensus 136 ~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 215 (499)
+|+++.+|. .+++|+.|++++|.++++ |. .+++|+.|++++|++++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 665555554 445556666666655542 22 34555566666665554 233 33 55666666666655 233
Q ss_pred ccccCCCCC-------CEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccC
Q 010856 216 DSFGDLISL-------KFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 216 ~~l~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 262 (499)
. +.. +| +.|+|++|+|+. +|..+..+++|+.|++++|++++.+
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp C-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred h-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 3 332 44 666666666653 3444444666666666666665543
No 108
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.86 E-value=3.5e-23 Score=195.56 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=102.6
Q ss_pred hhcccccccccCCcceEEEEEe----CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL----GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
++|++.+.||+|+||+||+|+. .+++.||+|++++.. ......+.+|++++++++|||||++++++.+.+ ..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT--EE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EE
Confidence 5799999999999999999985 247899999997653 233457889999999999999999999987743 44
Q ss_pred eeeecccC-CCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSS-ASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~-~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++||+. |++.+.+.... ...+.++.|++.||+|||+ |+||+|+|++.++.+|++|||+++.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 55677775 45545444322 2344556899999999976 8999999999999999999999975
No 109
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=3.6e-21 Score=174.85 Aligned_cols=150 Identities=22% Similarity=0.352 Sum_probs=70.3
Q ss_pred EEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCc-cccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCc
Q 010856 107 RLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPL-TFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNN 185 (499)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 185 (499)
.++++++.++.+ |..+. ++|+.|++++|+++.++. .+..+++|++|+|++|.++++.+..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 445555555422 22222 345555555555554332 34444455555555555544444444444455555555554
Q ss_pred ccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCc
Q 010856 186 FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 186 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
++...+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444443
No 110
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.8e-21 Score=190.87 Aligned_cols=155 Identities=25% Similarity=0.276 Sum_probs=77.5
Q ss_pred CCEEeccCCcCCccCCcccc-CCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeecc
Q 010856 57 STIVNLGGNKLNGSIPITLS-KLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLG 135 (499)
Q Consensus 57 L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 135 (499)
++.|+|++|+|++..+..|. ++++|++|+|++|+|+...+..|..+++|++|+|++|+++...+..|..+++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44444444444444444443 44444444444444444444444444445555555555444444444444555555555
Q ss_pred ccCCCCC-CccccCCCCCcEEEcCCCcCCCCCcccc---cCCCCccEEEccCCcccccCcccccCCcC--CceeeCcCCc
Q 010856 136 SNKLTSV-PLTFWNLKDILNLNFSSNFLTSPLPLEI---GNLKVLIGIDFSMNNFSGVIPTEIGGLKN--LEYLFLGYNR 209 (499)
Q Consensus 136 ~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~l~~l~~--L~~L~L~~n~ 209 (499)
+|+++.+ +..+..+++|+.|+|++|.++++.+..| ..+++|+.|+|++|+|+...+..+..++. |+.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 5555443 3344445555555555555554333333 34556666666666666555555555555 3666666666
Q ss_pred CC
Q 010856 210 LQ 211 (499)
Q Consensus 210 l~ 211 (499)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 111
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=6.2e-21 Score=196.08 Aligned_cols=189 Identities=26% Similarity=0.369 Sum_probs=159.8
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+|+.|+|++|++++ +|..+ .++|++|+|++|.|+ .+| ..+++|+.|+|++|++++ +|. +.. +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 79999999999997 55545 378999999999999 455 457899999999999997 555 655 99999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP 191 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (499)
+|++++ +|. .+++|+.|++++|+++.+|. .+++|++|++++|.+++ +|. +. ++|+.|++++|+|+. +|
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-LP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-CC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-hh
Confidence 999997 444 67999999999999999987 57899999999999998 444 65 899999999999994 44
Q ss_pred ccccCCcCC-------ceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCC
Q 010856 192 TEIGGLKNL-------EYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSY 247 (499)
Q Consensus 192 ~~l~~l~~L-------~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 247 (499)
. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..+..++.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 4 554 77 99999999999 56777777999999999999999988888776543
No 112
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.86 E-value=8.5e-23 Score=201.15 Aligned_cols=138 Identities=20% Similarity=0.174 Sum_probs=112.8
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcc----ccce
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVI----TFTV 433 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~----~~~~ 433 (499)
++|.+.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++... +...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4699999999999999999996 579999999997543 23456789999999999999999999987542 2234
Q ss_pred eeeeecccCCCccccccccccc----cccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 434 CLCLFHHSSASASASLVSSLTL----SRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~~~~~----~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++++||++|++...+...... .+.++.||+.||+|||+ |+||+|||++.++.++++|||+++.+
T Consensus 134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 5678889988877666543333 44556899999999877 89999999999999999999998753
No 113
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=177.89 Aligned_cols=154 Identities=25% Similarity=0.314 Sum_probs=111.3
Q ss_pred EEeeecCCCCCcCCccccCCccCCeeeccccCCCCCC--ccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCC
Q 010856 107 RLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP--LTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMN 184 (499)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 184 (499)
.+++++|.++. +|..+. ..++.|++++|+++.++ ..+..+++|++|++++|.++++.+..|.++++|++|++++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 55666666653 233332 34566666666666652 23566777777777777777666667777777778888888
Q ss_pred cccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCC
Q 010856 185 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 185 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 263 (499)
++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7777777777788888888888888887777788888888888888888887778888888888888888888876554
No 114
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=1.2e-21 Score=203.50 Aligned_cols=193 Identities=20% Similarity=0.294 Sum_probs=133.0
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
++..+.+..+.+.+..+ +..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 45555666666664433 45667777777777777643 2 46777777777777777775543 6777777777777
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP 191 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (499)
+|.+++. ..+..+++|+.|+|++|+++.++ .+..+++|+.|+|++|.++++ ..+..+++|+.|+|++|.+++..|
T Consensus 96 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 96 ENKIKDL--SSLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SSCCCCC--TTSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCCC--hhhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 7777743 25677777777777777777764 466777777777777777764 456677777777777777776544
Q ss_pred ccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCc
Q 010856 192 TEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIP 239 (499)
Q Consensus 192 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 239 (499)
+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.....
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 67777777777777777754 356777777777777777765433
No 115
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.85 E-value=5.2e-23 Score=199.19 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=111.8
Q ss_pred cCHHHHHHHhhhcccccccccCCcceEEEEEeC------CCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCC-CCcccc
Q 010856 351 FSYLELFRATDEFSENNLIGKGGFGSVYKARLG------DRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRH-RNLIKI 422 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H-~niv~l 422 (499)
+....++...++|++.+.||+|+||+||+|++. .++.||||+++.... ...+.|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 445566667788999999999999999999852 246899999976543 345679999999999965 899999
Q ss_pred ceeEEccccceeeeeecccC-CCcccccccc--------------------ccccccccccccccceeecc------CCC
Q 010856 423 LHGVAVITFTVCLCLFHHSS-ASASASLVSS--------------------LTLSRPAKGGGFRGCVLWHV------GVD 475 (499)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~--------------------~~~~~~~~~~i~~gl~yLH~------~~~ 475 (499)
+|+|...+. ..++++||+. |++.+.++.. +.....++.|||+||+|||+ |+|
T Consensus 134 ~g~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK 212 (353)
T 4ase_A 134 LGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 212 (353)
T ss_dssp EEEECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence 999876332 3345667765 4544444321 11223446899999999866 899
Q ss_pred cccEEEeeCCCeEEEEEEEeecc
Q 010856 476 FAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 476 p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
|.|||+++++.+|++|||+++.+
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~ 235 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDI 235 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCT
T ss_pred ccceeeCCCCCEEECcchhhhhc
Confidence 99999999999999999999754
No 116
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=5e-21 Score=181.73 Aligned_cols=187 Identities=27% Similarity=0.368 Sum_probs=156.8
Q ss_pred EECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccc
Q 010856 10 IYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDN 89 (499)
Q Consensus 10 L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 89 (499)
+.+..+.+++..+ ...++ +|++|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|++|++++|
T Consensus 29 ~~l~~~~~~~~~~---~~~l~-~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 29 DNLKKKSVTDAVT---QNELN-SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHTTCSCTTSEEC---HHHHH-TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHhcCCCcccccc---hhhcC-cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 3456666665433 34566 899999999999865 3 48889999999999999986555 889999999999999
Q ss_pred cccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCccc
Q 010856 90 KLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLE 169 (499)
Q Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 169 (499)
.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|+++.+ ..+..+++|+.|++++|.+++..+
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--
Confidence 99853 3488999999999999999864 4688899999999999999988 578889999999999999987655
Q ss_pred ccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCC
Q 010856 170 IGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGS 213 (499)
Q Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 213 (499)
+..+++|+.|++++|.+++. ..+..+++|+.|++++|+++..
T Consensus 174 l~~l~~L~~L~L~~N~i~~l--~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEEEEEEECC
T ss_pred hcCCCccCEEECCCCcCCCC--hhhccCCCCCEEECcCCcccCC
Confidence 88999999999999999865 3488999999999999998854
No 117
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.85 E-value=2e-22 Score=191.93 Aligned_cols=135 Identities=16% Similarity=0.082 Sum_probs=102.0
Q ss_pred hhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccc--ceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITF--TVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~--~~~~~l~ 438 (499)
.+|.+.+.||+|+||+||+|++ +|+.||||+++.... ....+.+|+..+.+++|||||+++|+|...+. ...++++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4588889999999999999998 688999999975431 11223455666678999999999999976432 2456678
Q ss_pred cccCCC-ccccccc---cccccccccccccccceeec--------------cCCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSAS-ASASLVS---SLTLSRPAKGGGFRGCVLWH--------------VGVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~-~~~~l~~---~~~~~~~~~~~i~~gl~yLH--------------~~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
||+.|+ +.+.++. .+.....++.|+++||+||| +|+||.|||++.++.+|++|||+++.
T Consensus 81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 888654 4444432 22234455789999999885 57999999999999999999999875
No 118
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.85 E-value=1.8e-22 Score=193.07 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=104.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.+.|...+.||+|+||+||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+.+ ..++++
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 45688889999999999999996 5799999999976432 247999999999999999999987643 345577
Q ss_pred cccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC-CeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP-GVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~-~~~~~~f~~~~~~ 498 (499)
||+.| ++.+.+... +.....++.||+.||+|||+ |+||+|||++.++ .+|++|||+++.+
T Consensus 130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 77755 554444332 23344556899999999977 8999999998876 5999999999764
No 119
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=2.6e-21 Score=175.76 Aligned_cols=153 Identities=25% Similarity=0.309 Sum_probs=71.3
Q ss_pred eeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcC
Q 010856 131 IVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRL 210 (499)
Q Consensus 131 ~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 210 (499)
.++++++.++.+|..+. ++|+.|++++|.++++.+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++
T Consensus 15 ~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 34444444444443332 3444444444444444444444444444444444444444444444444444444444444
Q ss_pred CCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCC-CCCCCCccccccCCCcCCCCC
Q 010856 211 QGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGSFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 211 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~~~l~~N~~~c~~ 285 (499)
+.+.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+. ...++.++.+++.+|+|.|+|
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 444444444444444444444444444444444444444444444444443332 122344444444444444444
No 120
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=1.6e-20 Score=170.53 Aligned_cols=157 Identities=23% Similarity=0.225 Sum_probs=142.3
Q ss_pred CCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCc-ccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcC
Q 010856 129 LRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLP-LEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGY 207 (499)
Q Consensus 129 L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~ 207 (499)
-+.+++++|.++.+|..+. +.+++|++++|.+++..+ ..|..+++|+.|++++|++++..+..|.++++|++|+|++
T Consensus 13 ~~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 13 GTTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TTEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 3589999999999997663 467899999999998754 5689999999999999999998888999999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCCcCCCCCC
Q 010856 208 NRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 208 n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N~~~c~~~ 286 (499)
|++++..+..|..+++|+.|++++|++++..|..|..+++|+.|++++|++++..|.. ..+++++.+++.+|+|.|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999988888999999999999999999999999999999999999999999886654 457889999999999999875
Q ss_pred C
Q 010856 287 N 287 (499)
Q Consensus 287 ~ 287 (499)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 121
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=8.2e-21 Score=186.15 Aligned_cols=177 Identities=25% Similarity=0.252 Sum_probs=90.1
Q ss_pred CEEeccCCcCCccCCccccCCCCCCeEecccccccccCCcccc-CcccccEEeeecCCCCCcCCccccCCccCCeeeccc
Q 010856 58 TIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDIC-HLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGS 136 (499)
Q Consensus 58 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 136 (499)
+.+++++|.++. +|..+. +.++.|+|++|++++..+..|. .+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666653 333222 2355556665555555444444 555555555555555554444555555555555555
Q ss_pred cCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCc
Q 010856 137 NKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPD 216 (499)
Q Consensus 137 n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 216 (499)
|+++. +.+..|..+++|+.|+|++|+|+...+..|.++++|++|+|++|++++..+.
T Consensus 98 N~l~~-----------------------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 98 NHLHT-----------------------LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SCCCE-----------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CcCCc-----------------------CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 55544 3333444444455555555555444444555555555555555555543333
Q ss_pred cc---cCCCCCCEEeCCCCcCCccCcccccCCCC--CCEEEccCCcCcc
Q 010856 217 SF---GDLISLKFLNLSNNNLSGAIPASLEKLSY--LENLNLSFNKLEG 260 (499)
Q Consensus 217 ~l---~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~L~l~~N~l~~ 260 (499)
.| ..+++|+.|+|++|+|+...+..+..++. ++.|++++|++.+
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 33 34555666666666665554455555554 2555555555543
No 122
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=3.7e-20 Score=192.40 Aligned_cols=188 Identities=27% Similarity=0.365 Sum_probs=124.8
Q ss_pred EEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEeccc
Q 010856 9 LIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLED 88 (499)
Q Consensus 9 ~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 88 (499)
.+.+..+.+.+..+ +..++ +|+.|++++|.+..+ + .+..+++|+.|+|++|.+++..+ +..+++|+.|+|++
T Consensus 25 ~l~l~~~~i~~~~~---~~~L~-~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 25 KDNLKKKSVTDAVT---QNELN-SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHTTCSCTTSEEC---HHHHT-TCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHhccCCCcccccc---hhcCC-CCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 34455555554433 23444 677777777777643 2 46677777777777777765444 66777777777777
Q ss_pred ccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcc
Q 010856 89 NKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPL 168 (499)
Q Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 168 (499)
|.+.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+++.+ ..+..+++|+.|+|++|.+++..+
T Consensus 97 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 97 NKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-
Confidence 777642 2566777777777777777753 3466677777777777777766 456677777777777777776544
Q ss_pred cccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCC
Q 010856 169 EIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGS 213 (499)
Q Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 213 (499)
+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66777777777777777654 3466777777777777776654
No 123
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=7e-20 Score=167.48 Aligned_cols=154 Identities=25% Similarity=0.237 Sum_probs=115.4
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
+-+.++++++.++. +|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 20 s~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 56677887777774 343333 678888888888887777778888888888888888876666667778888888888
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccc
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSG 188 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (499)
+|++++..+..|..+++|+.|+|++|+++.+|..+..+++|++|++++|.+++..+..|..+++|+.|++++|.+..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 88888777777777888888888888888877777777777777777777776666666667777777777776653
No 124
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=7.8e-20 Score=167.15 Aligned_cols=154 Identities=25% Similarity=0.301 Sum_probs=98.2
Q ss_pred ccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCC-CccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccC
Q 010856 105 LYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSV-PLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSM 183 (499)
Q Consensus 105 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 183 (499)
-+.++.+++.++.+ |..+. ++|+.|+|++|+++.+ +..+..+++|++|+|++|.++.+.+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~~i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHASV-PAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCcc-CCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 34566666666633 33332 5666777777776664 44566666677777777766665555566666666777766
Q ss_pred CcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccC
Q 010856 184 NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 184 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 262 (499)
|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|..+++|+.|++++|++.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 6666665555666666666666666666 44556666666666666666666655556666666666666666666544
No 125
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.83 E-value=4.7e-23 Score=216.07 Aligned_cols=274 Identities=11% Similarity=0.061 Sum_probs=132.2
Q ss_pred CCCCCCEEECcCCCCCccCCh---hccccccccccEEEcccCCCcc----cCCccccCCCCCCEEeccCCcCCccCCccc
Q 010856 3 NCKSLTLIYLSNNPLDGILPK---TSVGNLSHSLEDFRMYNCNISG----GIPEEISNLTNSTIVNLGGNKLNGSIPITL 75 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~---~~~~~l~~~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 75 (499)
++++|++|+|++|.+++.... .....++ +|++|++++|.+++ ..+..+.++++|++|++++|.+.+ .+..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~-~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNT-SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCC-CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCC-CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 467788888888876654322 1233455 67777777777752 233344566777777777776543 22333
Q ss_pred cCCCCCCeEec---------------------------ccccccccCCccccCcccccEEeeecCCCCCcCC-ccccCCc
Q 010856 76 SKLQKLQGLGL---------------------------EDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLP-ACFSNLT 127 (499)
Q Consensus 76 ~~l~~L~~L~L---------------------------~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~ 127 (499)
..+++|++|++ +++.. ...+..+..+++|++|++++|.+++... ..+..++
T Consensus 240 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~ 318 (592)
T 3ogk_B 240 KAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP 318 (592)
T ss_dssp HHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT
T ss_pred hhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc
Confidence 33333333333 33221 1334455566777777777777553222 2235556
Q ss_pred cCCeeeccccCCCC--CCccccCCCCCcEEEcCC-----------CcCCCCCc-ccccCCCCccEEEccCCcccccCccc
Q 010856 128 SLRIVSLGSNKLTS--VPLTFWNLKDILNLNFSS-----------NFLTSPLP-LEIGNLKVLIGIDFSMNNFSGVIPTE 193 (499)
Q Consensus 128 ~L~~L~L~~n~l~~--~~~~~~~l~~L~~L~l~~-----------n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (499)
+|+.|+++ +.+.. ++.....+++|++|++++ |.+++... .....+++|++|+++.|.+++..+..
T Consensus 319 ~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 319 NLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred CCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 66666665 22222 222223445555555551 33332111 11222444444444444444333333
Q ss_pred c----------------------------------cCCcCCceeeCcCCc--CCCCCCccc-cCCCCCCEEeCCCCcCCc
Q 010856 194 I----------------------------------GGLKNLEYLFLGYNR--LQGSIPDSF-GDLISLKFLNLSNNNLSG 236 (499)
Q Consensus 194 l----------------------------------~~l~~L~~L~L~~n~--l~~~~~~~l-~~l~~L~~L~l~~N~l~~ 236 (499)
+ .++++|++|++++|. +++.....+ ..+++|+.|++++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 3 334445555544321 332222222 225556666666666553
Q ss_pred c-CcccccCCCCCCEEEccCCcCcccC-CC-CCCCCCccccccCCCc
Q 010856 237 A-IPASLEKLSYLENLNLSFNKLEGEI-PR-GGSFGNFSAESFEGNE 280 (499)
Q Consensus 237 ~-~~~~~~~l~~L~~L~l~~N~l~~~~-~~-~~~~~~l~~~~l~~N~ 280 (499)
. .+..+..+++|+.|++++|++++.. +. ...+++++.+++++|.
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 2 2333455566666666666654321 11 1124555566666555
No 126
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=7e-21 Score=177.89 Aligned_cols=149 Identities=20% Similarity=0.263 Sum_probs=61.1
Q ss_pred ccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcE
Q 010856 75 LSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILN 154 (499)
Q Consensus 75 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~ 154 (499)
+..+++|+.|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|+.|++++|+++.++.... ++|++
T Consensus 37 ~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~ 110 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPS--ACLSR 110 (263)
T ss_dssp HHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCCC--SSCCE
T ss_pred hhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCcccc--CcccE
Confidence 33444444444444444322 1 33444444444444444443322 4444444444444444444332111 44444
Q ss_pred EEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcC
Q 010856 155 LNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNL 234 (499)
Q Consensus 155 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l 234 (499)
|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 111 L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 111 LFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp EECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEE
T ss_pred EEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcc
Confidence 44444444432 1233344444444444444332 1233444444444444444433 3334444444444444444
Q ss_pred C
Q 010856 235 S 235 (499)
Q Consensus 235 ~ 235 (499)
+
T Consensus 185 ~ 185 (263)
T 1xeu_A 185 V 185 (263)
T ss_dssp E
T ss_pred c
Confidence 3
No 127
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=9.2e-20 Score=162.68 Aligned_cols=154 Identities=16% Similarity=0.243 Sum_probs=105.5
Q ss_pred ccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCC
Q 010856 51 ISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLR 130 (499)
Q Consensus 51 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 130 (499)
...+++|++|++++|.++. .| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 3556677777777777763 33 46677777777777776552 24566777777777777777766666777777777
Q ss_pred eeeccccCCCC-CCccccCCCCCcEEEcCCCc-CCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCC
Q 010856 131 IVSLGSNKLTS-VPLTFWNLKDILNLNFSSNF-LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN 208 (499)
Q Consensus 131 ~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 208 (499)
+|++++|+++. .+..+..+++|++|++++|. ++.. + .+..+++|+.|++++|++++.. .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCc
Confidence 77777777775 55567777777777777776 6543 3 5677777888888887777542 6677788888888888
Q ss_pred cCCC
Q 010856 209 RLQG 212 (499)
Q Consensus 209 ~l~~ 212 (499)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 7653
No 128
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=3.6e-20 Score=172.99 Aligned_cols=171 Identities=20% Similarity=0.255 Sum_probs=145.4
Q ss_pred CCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEE
Q 010856 77 KLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLN 156 (499)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~ 156 (499)
.+.++..+++++|.+++.. .+..+++|++|++++|.++.. + .+..+++|+.|++++|++++++. +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 4566778888888887553 578899999999999999854 3 68889999999999999999887 88999999999
Q ss_pred cCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCc
Q 010856 157 FSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSG 236 (499)
Q Consensus 157 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 236 (499)
+++|++++..+ +.. ++|+.|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcc
Confidence 99999987543 223 8999999999999865 4588999999999999999865 368889999999999999987
Q ss_pred cCcccccCCCCCCEEEccCCcCccc
Q 010856 237 AIPASLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 237 ~~~~~~~~l~~L~~L~l~~N~l~~~ 261 (499)
. ..+..+++|+.|++++|++++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 6 6788899999999999999865
No 129
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=1.1e-22 Score=210.27 Aligned_cols=190 Identities=23% Similarity=0.200 Sum_probs=113.6
Q ss_pred cCCCCCCEEeccCCcCCccCCccccCCCCCCeEeccccc-------------ccccCCccccCcccccEEe-eecCCCCC
Q 010856 52 SNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNK-------------LEGSIPDDICHLAELYRLD-LDGNKLSG 117 (499)
Q Consensus 52 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-L~~n~l~~ 117 (499)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788888888888887 567778888888888887664 3445555666677777776 454432
Q ss_pred cCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCC
Q 010856 118 SLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGL 197 (499)
Q Consensus 118 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 197 (499)
..|+.+.+++|.++.++. ..|+.|++++|.++++ |. +..+++|+.|+|++|.++ .+|..+..+
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ---------chhhhhhhhcccccccCc-----cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 223333444444443321 2355566666665542 33 555566666666666665 345555666
Q ss_pred cCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccC-cccccCCCCCCEEEccCCcCcccCC
Q 010856 198 KNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAI-PASLEKLSYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 198 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~ 263 (499)
++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|++++|++++.+|
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 666666666666654 33 5556666666666666666554 5556666666666666666665544
No 130
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=1.3e-19 Score=161.75 Aligned_cols=154 Identities=18% Similarity=0.219 Sum_probs=105.7
Q ss_pred cCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEE
Q 010856 100 CHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGI 179 (499)
Q Consensus 100 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 179 (499)
..+++|++|++++|.++. .+ .+..+++|++|++++|.++.++ .+..+++|++|++++|.+++..+..+..+++|+.|
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 445566666666666663 23 4556666666666666555544 56667777777777777766556667777778888
Q ss_pred EccCCcccccCcccccCCcCCceeeCcCCc-CCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcC
Q 010856 180 DFSMNNFSGVIPTEIGGLKNLEYLFLGYNR-LQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKL 258 (499)
Q Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 258 (499)
++++|++++..+..+..+++|++|++++|. ++.. + .+..+++|+.|++++|++++.. .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCccc
Confidence 888887776667777788888888888887 6533 3 5777888888888888887533 677788888888888887
Q ss_pred cc
Q 010856 259 EG 260 (499)
Q Consensus 259 ~~ 260 (499)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 53
No 131
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=7e-20 Score=162.61 Aligned_cols=155 Identities=26% Similarity=0.346 Sum_probs=92.0
Q ss_pred CeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcc-cccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCC
Q 010856 130 RIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPL-EIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN 208 (499)
Q Consensus 130 ~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 208 (499)
+.+++++|+++.+|..+.. +|++|++++|.++++.+. .|..+++|++|++++|++++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4555666666555554432 566666666666554443 3566666666666666666666666666666666666666
Q ss_pred cCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCCCCCCCccccccCCCcCCCCCC
Q 010856 209 RLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 209 ~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~l~~N~~~c~~~ 286 (499)
++++..+..|..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+.......+....+.++...|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 666666666666666777777777766666666666677777777777766554432111122223344444455543
No 132
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=4e-22 Score=205.93 Aligned_cols=203 Identities=20% Similarity=0.156 Sum_probs=168.7
Q ss_pred cccccccEEEcccCCCcccCCccccCCCCCCEEeccCCc-------------CCccCCccccCCCCCCeEe-cccccccc
Q 010856 28 NLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNK-------------LNGSIPITLSKLQKLQGLG-LEDNKLEG 93 (499)
Q Consensus 28 ~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-L~~n~l~~ 93 (499)
..+ +|+.|+|++|.++ .+|..++++++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 347 ~~~-~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 347 TDE-QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp TTT-TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred cCc-cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 345 7999999999998 678889999999999997775 4556677788888899888 666654
Q ss_pred cCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCC
Q 010856 94 SIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNL 173 (499)
Q Consensus 94 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 173 (499)
.+|+.+.+++|.++...+ ..|+.|++++|+++.+|. +..+++|+.|+|++|.++ .+|..+..+
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 456677788888774432 258899999999999986 899999999999999999 567899999
Q ss_pred CCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCC-CccccCCCCCCEEeCCCCcCCccCcc---cccCCCCCC
Q 010856 174 KVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSI-PDSFGDLISLKFLNLSNNNLSGAIPA---SLEKLSYLE 249 (499)
Q Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~L~ 249 (499)
++|+.|+|++|++++ +| .+..+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++.++. .+..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 999999999999997 45 7899999999999999999876 89999999999999999999876553 234588999
Q ss_pred EEEc
Q 010856 250 NLNL 253 (499)
Q Consensus 250 ~L~l 253 (499)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8875
No 133
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.80 E-value=2.3e-20 Score=192.89 Aligned_cols=137 Identities=16% Similarity=0.187 Sum_probs=109.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.++|.+.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++...+ ..++++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEE
Confidence 36799999999999999999996 579999999998765555678999999999999999999999987643 445567
Q ss_pred cccC-CCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeC--CCeEEEEEEEeecc
Q 010856 439 HHSS-ASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE--PGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~-~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~--~~~~~~~f~~~~~~ 498 (499)
||+. |++.+.+.. .+...+.++.||+.||+|||+ |+||.|++++.+ +.++++|||+++.+
T Consensus 234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 7775 455444432 122344556899999999876 899999999854 78999999999764
No 134
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.80 E-value=1.5e-20 Score=183.10 Aligned_cols=137 Identities=16% Similarity=0.105 Sum_probs=106.6
Q ss_pred HHHhhhcccccccccCCcceEEEEEe----CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEcccc
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL----GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITF 431 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~ 431 (499)
....+.|++.+.||+|+||+||+|+. .+++.||+|++.+.. ...++.+|+++++.+ +|||||++++++...+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~- 93 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND- 93 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT-
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC-
Confidence 34457799999999999999999984 247889999986543 346788999999988 7999999999987744
Q ss_pred ceeeeeecccCCC-cccccc-ccccccccccccccccceeecc------CCCcccEEEeeC-CCeEEEEEEEeec
Q 010856 432 TVCLCLFHHSSAS-ASASLV-SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE-PGVEVICFVFEIL 497 (499)
Q Consensus 432 ~~~~~l~~~~~~~-~~~~l~-~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~-~~~~~~~f~~~~~ 497 (499)
..++++||+.|+ +.+.+. ......+.++.|++.||+|||+ |+||+|||++.+ +.++++|||+++.
T Consensus 94 -~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 94 -HVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp -EEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred -EEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 445677777654 433332 2233455567899999998876 899999999876 6899999999864
No 135
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=3.7e-20 Score=197.14 Aligned_cols=218 Identities=22% Similarity=0.250 Sum_probs=115.2
Q ss_pred cccEEEcccCCCcccCCccccCCCCCC-----EEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCccccc
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNST-----IVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELY 106 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~-----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 106 (499)
.++.|+|.+|.+... +..+.....|. .++++.|.+. ..+..|..+++|+.|+|++|.+. .+|..+..+++|+
T Consensus 174 ~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 174 LTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLT 250 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCS
T ss_pred ccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCC
Confidence 567777777776643 32222222222 2233344444 55677888888999999998888 5566666888899
Q ss_pred EEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcc
Q 010856 107 RLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNF 186 (499)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 186 (499)
+|+|++|.++ .+|..|..+++|+.|+|++|+|+.+|..+..+++|++|+|++|.|+. +|..|..+++|+.|+|++|.+
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCC-CCSSTTSCTTCCCEECTTSCC
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCc-cChhhhcCCCccEEeCCCCcc
Confidence 9999999888 66778888899999999999998888888888999999999998874 566688899999999999999
Q ss_pred cccCcccccCCcC-CceeeCcCCcCCCCCCccccCCCCCCEEeCCCC--------cCCccCcccccCCCCCCEEEccCCc
Q 010856 187 SGVIPTEIGGLKN-LEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNN--------NLSGAIPASLEKLSYLENLNLSFNK 257 (499)
Q Consensus 187 ~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N--------~l~~~~~~~~~~l~~L~~L~l~~N~ 257 (499)
++..|..+..+.. +..|+|++|.+++..|. .|+.|+++.| .+.+..+..+..+..+....+++|-
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Ni 402 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNT 402 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----------------------------------------C
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeeccc
Confidence 8887777755432 23478889988877665 4556666666 3444444455566666777777777
Q ss_pred Ccc
Q 010856 258 LEG 260 (499)
Q Consensus 258 l~~ 260 (499)
+.+
T Consensus 403 l~~ 405 (727)
T 4b8c_D 403 LCQ 405 (727)
T ss_dssp CCG
T ss_pred ccc
Confidence 753
No 136
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.79 E-value=3.4e-20 Score=190.76 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=106.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHH---HHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVE---CEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.++|.+.++||+|+||+||+|+. .+|+.||||++++.. ......+.+| +++++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 47899999999999999999996 479999999997643 2223334444 56778899999999999988744
Q ss_pred eeeeeecccC-CCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 433 VCLCLFHHSS-ASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 433 ~~~~l~~~~~-~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
..++++||+. |++...+.... ...+.++.||+.||+|||+ |+||+|||++.++.++++|||+++.+
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 3445677765 55555554332 3344556899999999877 89999999999999999999998754
No 137
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=3e-21 Score=202.33 Aligned_cols=257 Identities=18% Similarity=0.149 Sum_probs=155.3
Q ss_pred CCCCCCEEECcCCCCCccCCh---hccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcC------------
Q 010856 3 NCKSLTLIYLSNNPLDGILPK---TSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKL------------ 67 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~---~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l------------ 67 (499)
++++|++|++++|.+++.... ..+..++ +|++|++++|.+.+ .+..+..+++|++|++++...
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~-~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCR-SLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCT-TCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCC-CCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 467888888888888643221 1234555 78888888877654 334444444444444432110
Q ss_pred --------------CccCCccccCCCCCCeEecccccccccCC-ccccCc------------------------ccccEE
Q 010856 68 --------------NGSIPITLSKLQKLQGLGLEDNKLEGSIP-DDICHL------------------------AELYRL 108 (499)
Q Consensus 68 --------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l------------------------~~L~~L 108 (499)
....|..+..+++|++|+|++|.+++... ..+..+ ++|++|
T Consensus 268 ~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 268 FPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp CCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred ccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEE
Confidence 11223334455666666666666543221 123344 445555
Q ss_pred eeec-----------CCCCCcC-CccccCCccCCeeeccccCCCC-CCccccC-CCCCcEEEcC----CCcCCCC-----
Q 010856 109 DLDG-----------NKLSGSL-PACFSNLTSLRIVSLGSNKLTS-VPLTFWN-LKDILNLNFS----SNFLTSP----- 165 (499)
Q Consensus 109 ~L~~-----------n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~-l~~L~~L~l~----~n~l~~~----- 165 (499)
++++ |.+++.. +.....+++|++|+++.|+++. .+..+.. +++|+.|+++ .|.+++.
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~ 427 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNG 427 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHH
T ss_pred EeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHH
Confidence 5552 3333211 1112335666666666666654 2223333 6778888885 5666653
Q ss_pred CcccccCCCCccEEEccCCc--ccccCccccc-CCcCCceeeCcCCcCCCC-CCccccCCCCCCEEeCCCCcCCcc-Ccc
Q 010856 166 LPLEIGNLKVLIGIDFSMNN--FSGVIPTEIG-GLKNLEYLFLGYNRLQGS-IPDSFGDLISLKFLNLSNNNLSGA-IPA 240 (499)
Q Consensus 166 ~~~~~~~l~~L~~L~l~~n~--l~~~~~~~l~-~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~N~l~~~-~~~ 240 (499)
.+..+.++++|+.|++++|. +++..+..+. .+++|++|++++|++++. .+..+..+++|+.|++++|++++. .+.
T Consensus 428 ~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 507 (592)
T 3ogk_B 428 VRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAA 507 (592)
T ss_dssp HHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHH
T ss_pred HHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHH
Confidence 22235567888888887543 5544444443 489999999999999863 345568899999999999998754 344
Q ss_pred cccCCCCCCEEEccCCcCccc
Q 010856 241 SLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 241 ~~~~l~~L~~L~l~~N~l~~~ 261 (499)
....+++|+.|++++|+++..
T Consensus 508 ~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 508 AVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhcCccCeeECcCCcCCHH
Confidence 456799999999999998854
No 138
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=2.2e-19 Score=173.69 Aligned_cols=102 Identities=12% Similarity=0.089 Sum_probs=69.7
Q ss_pred CCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCc-eeeCcCCcCCCCCCccccCCCCCCEE
Q 010856 149 LKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLE-YLFLGYNRLQGSIPDSFGDLISLKFL 227 (499)
Q Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~l~~l~~L~~L 227 (499)
+++|+.|++++|.++.+....|.++++|+.|++.+| ++.+.+..|.++++|+ .+++.+ .++.+.+..|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777776666666666777777777777666 6656666677777776 777766 5655666667777777777
Q ss_pred eCCCCcCCccCcccccCCCCCCEEE
Q 010856 228 NLSNNNLSGAIPASLEKLSYLENLN 252 (499)
Q Consensus 228 ~l~~N~l~~~~~~~~~~l~~L~~L~ 252 (499)
++++|+++.+.+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7777777666666777777776665
No 139
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=1.8e-17 Score=163.89 Aligned_cols=244 Identities=12% Similarity=0.073 Sum_probs=202.9
Q ss_pred CCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCe
Q 010856 4 CKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQG 83 (499)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 83 (499)
+..++.+.+.+ .++.+... +|.+ . +|+.+.+..+ ++.+...+|.++ +|+.+.+.. .++.+.+.+|.++++|+.
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~-aF~~-~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKD-AFRN-S-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp CSSCSEEECCT-TCCEECTT-TTTT-C-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred cCCccEEEECC-ccCEehHh-hccc-C-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 46777888874 46656555 6665 3 6999999876 777888899885 799999986 777788889999999999
Q ss_pred EecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCC
Q 010856 84 LGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLT 163 (499)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~ 163 (499)
+++++|+++.+....|. ..+|+.+.+..+ ++.+...+|.++++|+.+++..+ ++.++...+.-.+|+.+.+. +.++
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~lp-~~i~ 260 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKLP-NGVT 260 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEEE-TTCC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEeC-CCcc
Confidence 99999999977777777 589999999854 77788899999999999999875 66666544444899999994 5577
Q ss_pred CCCcccccCCCCccEEEccCCccc-----ccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccC
Q 010856 164 SPLPLEIGNLKVLIGIDFSMNNFS-----GVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAI 238 (499)
Q Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 238 (499)
.+....|.++++|+.+++.+|.+. .+.+..|.++++|+.+.+. +.++.+....|.++++|+.+++..| ++.+.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 778889999999999999988775 5677889999999999999 4588788889999999999999655 77788
Q ss_pred cccccCCCCCCEEEccCCcCccc
Q 010856 239 PASLEKLSYLENLNLSFNKLEGE 261 (499)
Q Consensus 239 ~~~~~~l~~L~~L~l~~N~l~~~ 261 (499)
..+|.++ +|+.+++++|.+...
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l 360 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQV 360 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBC
T ss_pred HHhCCCC-CCCEEEEcCCCCccc
Confidence 8999999 999999999987643
No 140
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.7e-18 Score=152.33 Aligned_cols=173 Identities=21% Similarity=0.277 Sum_probs=120.0
Q ss_pred cEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCcc--ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccC
Q 010856 106 YRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT--FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSM 183 (499)
Q Consensus 106 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 183 (499)
+++++++|+++. +|..+. .+|+.|++++|+++.++.. +..+++|++|++++|.+++..|..|.++++|+.|++++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 466666666653 333333 2677777777777776543 67778888888888888877778888888888888888
Q ss_pred CcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcc-cccCCCCCCEEEccCCcCcccC
Q 010856 184 NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPA-SLEKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 184 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~ 262 (499)
|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|+++...+. ++.. .++...+..+...+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~--~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE--WLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHH--HHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHH--HHHHcCCCCCCCCCCC
Confidence 888888887888888888888888888888888888888999999999988754331 1111 1222233445555444
Q ss_pred CCCCCCCCccccccCCCcCCCCC
Q 010856 263 PRGGSFGNFSAESFEGNELLCGS 285 (499)
Q Consensus 263 ~~~~~~~~l~~~~l~~N~~~c~~ 285 (499)
|.. +......++..+.+.|..
T Consensus 166 P~~--l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 166 PSK--VRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp STT--TTTSBGGGSCTTTCCCCC
T ss_pred ChH--HcCCChhhCcHhhcCcCC
Confidence 443 334445566677777754
No 141
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.75 E-value=1.1e-18 Score=168.11 Aligned_cols=149 Identities=19% Similarity=0.175 Sum_probs=117.4
Q ss_pred cccccCHHHHHHHhhh----------cccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCC
Q 010856 347 TWRTFSYLELFRATDE----------FSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIR 415 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~ 415 (499)
....++.+++..++.. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 3456788888877764 777789999999999999975 79999999998766666788999999999999
Q ss_pred CCCccccceeEEccccceeeeeecccCCCccccccc----cccccccccccccccceeecc------CCCcccEEEeeCC
Q 010856 416 HRNLIKILHGVAVITFTVCLCLFHHSSASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP 485 (499)
Q Consensus 416 H~niv~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~ 485 (499)
||||+++++++...+ ..++++|++.|+.+..+.. .+.....++.|++.||+|||+ +++|.||+++.++
T Consensus 101 h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 101 HFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp CTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred CCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence 999999999987643 4566788886654443322 222344456899999998876 8999999999999
Q ss_pred CeEEEEEEEeec
Q 010856 486 GVEVICFVFEIL 497 (499)
Q Consensus 486 ~~~~~~f~~~~~ 497 (499)
.++++|||++..
T Consensus 179 ~~kl~Dfg~~~~ 190 (321)
T 2c30_A 179 RVKLSDFGFCAQ 190 (321)
T ss_dssp CEEECCCTTCEE
T ss_pred cEEEeeeeeeee
Confidence 999999998764
No 142
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.75 E-value=2.1e-19 Score=173.31 Aligned_cols=145 Identities=23% Similarity=0.268 Sum_probs=114.8
Q ss_pred cCHHHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccc
Q 010856 351 FSYLELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVIT 430 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~ 430 (499)
++..++...+++|...+.||+|+||.||+|+.++++.||+|++........+.+.+|+++++.++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44445556778999999999999999999998889999999987766566788999999999999999999999886533
Q ss_pred cceeeeeecccCC-Ccccccccc--------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 431 FTVCLCLFHHSSA-SASASLVSS--------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 431 ~~~~~~l~~~~~~-~~~~~l~~~--------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
..+++++++.+ .+.+.+... +.....++.|+++||+|||+ +++|.||+++.++.++++|||++
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 34556777754 444433221 12233456899999998876 89999999999999999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 187 ~~ 188 (321)
T 2qkw_B 187 KK 188 (321)
T ss_dssp EE
T ss_pred cc
Confidence 63
No 143
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.75 E-value=1e-18 Score=169.12 Aligned_cols=140 Identities=15% Similarity=0.163 Sum_probs=107.4
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccc-----
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF----- 431 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~----- 431 (499)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3567999999999999999999975 79999999997654 3456789999999999999999999998855321
Q ss_pred --------------------------------------------------ceeeeeecccCCCccc-ccccccc------
Q 010856 432 --------------------------------------------------TVCLCLFHHSSASASA-SLVSSLT------ 454 (499)
Q Consensus 432 --------------------------------------------------~~~~~l~~~~~~~~~~-~l~~~~~------ 454 (499)
...++++|++.|+.+. .+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 1145567777654333 3222111
Q ss_pred -ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 455 -LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 455 -~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
....++.|++.||+|||+ ++||.||+++.++.++++|||++...
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 214 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCccccc
Confidence 123456899999998876 89999999999999999999987643
No 144
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=3.2e-18 Score=151.83 Aligned_cols=130 Identities=30% Similarity=0.410 Sum_probs=91.2
Q ss_pred CeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCc
Q 010856 130 RIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNR 209 (499)
Q Consensus 130 ~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 209 (499)
+.+++++|+++.+|..+. ++|++|++++|.++. +|..|.++++|+.|++++|.|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456666666666665432 466677777776663 44566667777777777777776666667777777777777777
Q ss_pred CCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccC
Q 010856 210 LQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI 262 (499)
Q Consensus 210 l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 262 (499)
++++.+..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|++.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 77777777777777777777777777666667777777888887777776543
No 145
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.74 E-value=4.2e-20 Score=193.66 Aligned_cols=179 Identities=12% Similarity=0.035 Sum_probs=105.1
Q ss_pred CcccccEEeeecCCCCCcC-CccccCCccCCeeeccccCCCC--CCccccCCCCCcEEEcCC---------CcCCCCCcc
Q 010856 101 HLAELYRLDLDGNKLSGSL-PACFSNLTSLRIVSLGSNKLTS--VPLTFWNLKDILNLNFSS---------NFLTSPLPL 168 (499)
Q Consensus 101 ~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~l~~L~~L~l~~---------n~l~~~~~~ 168 (499)
.+++|++|++++|.+++.. ...+..+++|+.|++++| ++. ++.....+++|++|++.+ +.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 5678899999888866432 223457788888888887 432 222233477888887733 344332222
Q ss_pred cc-cCCCCccEEEccCCcccccCccccc-CCcCCceeeCc--C----CcCCCCCC-----ccccCCCCCCEEeCCCCcCC
Q 010856 169 EI-GNLKVLIGIDFSMNNFSGVIPTEIG-GLKNLEYLFLG--Y----NRLQGSIP-----DSFGDLISLKFLNLSNNNLS 235 (499)
Q Consensus 169 ~~-~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~L~--~----n~l~~~~~-----~~l~~l~~L~~L~l~~N~l~ 235 (499)
.+ ..+++|+.|.++.|.+++.....+. .+++|++|+++ + +.+++... ..+..+++|+.|++++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 22 2367777777777777655444443 46777777777 3 44542211 1245566777777765 555
Q ss_pred ccCcccccC-CCCCCEEEccCCcCcccCCCC--CCCCCccccccCCCcC
Q 010856 236 GAIPASLEK-LSYLENLNLSFNKLEGEIPRG--GSFGNFSAESFEGNEL 281 (499)
Q Consensus 236 ~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~--~~~~~l~~~~l~~N~~ 281 (499)
+..+..+.. +++|+.|++++|.+++..... ..+++++.+++.+|+.
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 444444443 667777777777765432211 1256667777776664
No 146
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.74 E-value=9.6e-19 Score=166.66 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=109.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
..+|...+.||+|+||+||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++...+ ..++++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEE
Confidence 45799999999999999999995 579999999998766566778999999999999999999999987643 445677
Q ss_pred cccCCCcccc-ccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSASASAS-LVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~-l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
|++.|+.+.. +.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 7775544333 221 222344556899999998876 8999999999999999999998754
No 147
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=1.4e-16 Score=157.55 Aligned_cols=237 Identities=12% Similarity=0.071 Sum_probs=186.8
Q ss_pred cccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeee
Q 010856 32 SLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLD 111 (499)
Q Consensus 32 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 111 (499)
.++.+.+.+ .++.+...+|.++ +|+.+.+..| ++.+...+|.++ +|+.+.+.. .++.+...+|.++++|+.+++.
T Consensus 114 ~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~ 188 (401)
T 4fdw_A 114 GYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLS 188 (401)
T ss_dssp SCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECT
T ss_pred CccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecC
Confidence 788888765 4666778888885 7999998876 777778888884 699999986 6776777889999999999999
Q ss_pred cCCCCCcCCccccCCccCCeeeccccCCCCCC-ccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccC
Q 010856 112 GNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP-LTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVI 190 (499)
Q Consensus 112 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (499)
+|.++.+....|. ..+|+.+.+..+ ++.++ ..|.++++|+.+++..| ++.+....|.+ .+|+.+.+ .+.++.+.
T Consensus 189 ~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~ 263 (401)
T 4fdw_A 189 KTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIA 263 (401)
T ss_dssp TSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEEC
T ss_pred CCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEC
Confidence 9999987777887 589999999854 77654 46778899999999875 66677777877 78999999 45577777
Q ss_pred cccccCCcCCceeeCcCCcCC-----CCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC
Q 010856 191 PTEIGGLKNLEYLFLGYNRLQ-----GSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG 265 (499)
Q Consensus 191 ~~~l~~l~~L~~L~L~~n~l~-----~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 265 (499)
...|.++++|+.+++.+|.+. .+....|.++++|+.+++. +.++.+...+|.++++|+.+++..| ++...+..
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~a 341 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSA 341 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTS
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHh
Confidence 888999999999999888765 4667889999999999998 4588788889999999999999655 65443333
Q ss_pred CCCCCccccccCCCc
Q 010856 266 GSFGNFSAESFEGNE 280 (499)
Q Consensus 266 ~~~~~l~~~~l~~N~ 280 (499)
-.-..+..+.+.+|.
T Consensus 342 F~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 342 FNNTGIKEVKVEGTT 356 (401)
T ss_dssp SSSSCCCEEEECCSS
T ss_pred CCCCCCCEEEEcCCC
Confidence 222267778887775
No 148
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=8.6e-18 Score=145.76 Aligned_cols=132 Identities=23% Similarity=0.269 Sum_probs=94.1
Q ss_pred ccccEEEcccCCCc-ccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEe
Q 010856 31 HSLEDFRMYNCNIS-GGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLD 109 (499)
Q Consensus 31 ~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 109 (499)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++..|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 36777777777776 45566667777777777777777754 5667777777777777777765666666677777777
Q ss_pred eecCCCCCcCC-ccccCCccCCeeeccccCCCCCCc----cccCCCCCcEEEcCCCcCCC
Q 010856 110 LDGNKLSGSLP-ACFSNLTSLRIVSLGSNKLTSVPL----TFWNLKDILNLNFSSNFLTS 164 (499)
Q Consensus 110 L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~----~~~~l~~L~~L~l~~n~l~~ 164 (499)
+++|.+++... ..+..+++|+.|++++|.++.++. .+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 77777775432 567777777777777777777665 56677777777777777654
No 149
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.74 E-value=5.8e-19 Score=169.36 Aligned_cols=137 Identities=15% Similarity=0.195 Sum_probs=109.1
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..++|...+.||+|+||+||+|+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 96 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTL 96 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEE
Confidence 346799999999999999999998889999999996543 233567899999999999999999999987633 4456
Q ss_pred eecccCCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.+++...+... ......++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 97 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 97 VFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp EEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 7888887765544322 22234456899999998876 8999999999999999999998865
No 150
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.74 E-value=2.4e-19 Score=179.33 Aligned_cols=144 Identities=13% Similarity=0.076 Sum_probs=111.6
Q ss_pred CHHHHHHHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEE
Q 010856 352 SYLELFRATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVA 427 (499)
Q Consensus 352 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~ 427 (499)
.+.++....++|...++||+|+||+||+|+.+ +++.||+|++++.. ....+.+.+|+.++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555666789999999999999999999975 58899999997532 223345889999999999999999999987
Q ss_pred ccccceeeeeecccC-CCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 428 VITFTVCLCLFHHSS-ASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 428 ~~~~~~~~~l~~~~~-~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
..+ ..++++||+. |++...+.. .+...+.++.|++.||+|||+ ++||.||+++.++.++++|||++
T Consensus 145 ~~~--~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 145 DDN--NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp CSS--EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eCC--EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 743 4456777774 454444432 122234456888999988765 89999999999999999999988
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
+.
T Consensus 223 ~~ 224 (437)
T 4aw2_A 223 LK 224 (437)
T ss_dssp EE
T ss_pred hh
Confidence 64
No 151
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.74 E-value=1.9e-18 Score=164.78 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=105.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--------------------------ccHHHHHHHHHHHh
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--------------------------RAFESFDVECEMMK 412 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~il~ 412 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46799999999999999999996 5789999999975431 11356899999999
Q ss_pred cCCCCCccccceeEEccccceeeeeecccCCCcccccccc----ccccccccccccccceeecc------CCCcccEEEe
Q 010856 413 NIRHRNLIKILHGVAVITFTVCLCLFHHSSASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 413 ~l~H~niv~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
+++||||+++++++........++++|++.++....+... +.....++.|+++||+|||+ +++|.||+++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 9999999999999876434455667888866554443222 22234446899999998876 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||++..
T Consensus 172 ~~~~~kl~Dfg~~~~ 186 (298)
T 2zv2_A 172 EDGHIKIADFGVSNE 186 (298)
T ss_dssp TTSCEEECCCTTCEE
T ss_pred CCCCEEEecCCCccc
Confidence 999999999998764
No 152
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.73 E-value=6.2e-20 Score=192.38 Aligned_cols=275 Identities=14% Similarity=0.094 Sum_probs=180.2
Q ss_pred CCCCCCEEECcCCCCCccCChhccc-cccccccEEEcccC-CCccc-CCccccCCCCCCEEeccCCcCCccCCccc----
Q 010856 3 NCKSLTLIYLSNNPLDGILPKTSVG-NLSHSLEDFRMYNC-NISGG-IPEEISNLTNSTIVNLGGNKLNGSIPITL---- 75 (499)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~~L~~L~l~~n-~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---- 75 (499)
.+++|++|+|++|.+++..+. .+. .++ +|++|++++| .++.. .+..+.++++|++|+|++|.+++..+..+
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~-~l~~~~~-~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLE-LIAKSFK-NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHH-HHHHHCT-TCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred hCCCCCeEEeeCcEEcHHHHH-HHHHhCC-CCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 467899999999888766554 333 566 8999999888 55432 33344578888888888888775444333
Q ss_pred cCCCCCCeEeccccc--cccc-CCccccCcccccEEeeecCC--------------------------------------
Q 010856 76 SKLQKLQGLGLEDNK--LEGS-IPDDICHLAELYRLDLDGNK-------------------------------------- 114 (499)
Q Consensus 76 ~~l~~L~~L~L~~n~--l~~~-~~~~~~~l~~L~~L~L~~n~-------------------------------------- 114 (499)
..+++|++|++++|. +... ....+..+++|++|++++|.
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 356688888888876 2211 11112345777777777661
Q ss_pred ------------CCCc----CCccccCCccCCeeeccccCCCC--CCccccCCCCCcEEEcCCCcCCCC-CcccccCCCC
Q 010856 115 ------------LSGS----LPACFSNLTSLRIVSLGSNKLTS--VPLTFWNLKDILNLNFSSNFLTSP-LPLEIGNLKV 175 (499)
Q Consensus 115 ------------l~~~----~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~ 175 (499)
+... .+..+..+++|+.|++++|.++. +...+..+++|++|++++| +++. .+.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 1111 11122256899999999999775 3334668899999999988 4321 1222235789
Q ss_pred ccEEEccC---------CcccccCcccc-cCCcCCceeeCcCCcCCCCCCcccc-CCCCCCEEeCC--C----CcCCccC
Q 010856 176 LIGIDFSM---------NNFSGVIPTEI-GGLKNLEYLFLGYNRLQGSIPDSFG-DLISLKFLNLS--N----NNLSGAI 238 (499)
Q Consensus 176 L~~L~l~~---------n~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~l~--~----N~l~~~~ 238 (499)
|+.|++++ +.+++.....+ .++++|++|.++.|.+++.....+. .+++|+.|+++ + |.+++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 99999843 45554333333 3489999999999998865555554 58999999999 4 5666322
Q ss_pred -----cccccCCCCCCEEEccCCcCcccCCCC-C-CCCCccccccCCCcC
Q 010856 239 -----PASLEKLSYLENLNLSFNKLEGEIPRG-G-SFGNFSAESFEGNEL 281 (499)
Q Consensus 239 -----~~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~~l~~~~l~~N~~ 281 (499)
+..+..+++|+.|++++ .+++..+.. . ..++++.+++.+|..
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 22367789999999987 565432211 1 256788899988763
No 153
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.73 E-value=1.1e-18 Score=165.95 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=109.9
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
++|+..+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...+++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC--CEEEEE
Confidence 4689999999999999999996 468999999997654 23357789999999999999999999998763 345668
Q ss_pred ecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 80 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 88888876554432 222344556899999998876 8999999999999999999999864
No 154
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.73 E-value=1.1e-18 Score=167.95 Aligned_cols=137 Identities=16% Similarity=0.215 Sum_probs=95.8
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..++|+..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 80 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTL 80 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEE
Confidence 346799999999999999999996 469999999997654 334577899999999999999999999987633 4556
Q ss_pred eecccCCCcccccccc----------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVSS----------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~----------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.|++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 81 v~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 81 VFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 7888887765544321 12233345799999998876 8999999999999999999999864
No 155
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.73 E-value=7e-19 Score=170.01 Aligned_cols=150 Identities=31% Similarity=0.360 Sum_probs=116.9
Q ss_pred cccccCHHHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCcccccee
Q 010856 347 TWRTFSYLELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHG 425 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~ 425 (499)
....++.+++....++|...+.||+|+||.||+|+..+|+.||+|++.... ......+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 456789999999999999999999999999999998789999999997654 2233478999999999999999999999
Q ss_pred EEccccceeeeeecccCC-Ccccccccc--------ccccccccccccccceeecc---------CCCcccEEEeeCCCe
Q 010856 426 VAVITFTVCLCLFHHSSA-SASASLVSS--------LTLSRPAKGGGFRGCVLWHV---------GVDFAAFVFVLEPGV 487 (499)
Q Consensus 426 ~~~~~~~~~~~l~~~~~~-~~~~~l~~~--------~~~~~~~~~~i~~gl~yLH~---------~~~p~~~l~~~~~~~ 487 (499)
+...+ ..+++++++.+ ++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.+
T Consensus 96 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 96 CMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp ECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 87643 33456777755 443333221 12234456888888877765 689999999999999
Q ss_pred EEEEEEEeecc
Q 010856 488 EVICFVFEILL 498 (499)
Q Consensus 488 ~~~~f~~~~~~ 498 (499)
+++|||++...
T Consensus 174 kl~Dfg~~~~~ 184 (326)
T 3uim_A 174 VVGDFGLAKLM 184 (326)
T ss_dssp EECCCSSCEEC
T ss_pred EeccCcccccc
Confidence 99999998653
No 156
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.73 E-value=6.9e-19 Score=167.52 Aligned_cols=138 Identities=18% Similarity=0.137 Sum_probs=108.7
Q ss_pred hhhcccccccccCCcceEEEEEe-----CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-----GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|+..+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46789999999999999999984 3688999999976655556789999999999999999999999866443345
Q ss_pred eeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++++.+ ++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 567777754 544433221 12233456899999999876 8999999999999999999999865
No 157
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.73 E-value=6.1e-19 Score=170.24 Aligned_cols=138 Identities=18% Similarity=0.206 Sum_probs=110.1
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
...++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~ 89 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TL 89 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EE
Confidence 4467899999999999999999996 689999999997653 234567889999999999999999999987633 45
Q ss_pred eeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.| ++.+.+... ......++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 163 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE 163 (328)
T ss_dssp EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGG
T ss_pred EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCcee
Confidence 567788754 444443322 22334556899999999876 8999999999999999999999864
No 158
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.73 E-value=8.4e-19 Score=177.67 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=103.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccc---cce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT---FTV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~---~~~ 433 (499)
.++|...+.||+|+||+||+|+. .+++.||||++.... ....+++.+|++++++++|||||++++++...+ ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36799999999999999999995 479999999996543 234577899999999999999999999985432 234
Q ss_pred eeeeecccCCCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 434 CLCLFHHSSASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++++|++++++...+.... ...+.++.||+.||+|||+ ++||.|||++.++.++++|||+++..
T Consensus 132 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 56678888887666554332 2244456899999999876 89999999999999999999998753
No 159
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=1.4e-17 Score=144.42 Aligned_cols=133 Identities=23% Similarity=0.222 Sum_probs=68.2
Q ss_pred CCCCEEeccCCcCC-ccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeee
Q 010856 55 TNSTIVNLGGNKLN-GSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVS 133 (499)
Q Consensus 55 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 133 (499)
++|++|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++..|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45555555555554 33344445555555555555555433 3444455555555555555443444444444444444
Q ss_pred ccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCc---ccccCCcCCceeeCcCCcC
Q 010856 134 LGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIP---TEIGGLKNLEYLFLGYNRL 210 (499)
Q Consensus 134 L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---~~l~~l~~L~~L~L~~n~l 210 (499)
+++|+++.++ .+..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~----------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDIS----------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSG----------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcch----------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 4444444433 11445555555666666665554433 3556666666666666665
Q ss_pred C
Q 010856 211 Q 211 (499)
Q Consensus 211 ~ 211 (499)
.
T Consensus 160 ~ 160 (168)
T 2ell_A 160 Q 160 (168)
T ss_dssp C
T ss_pred h
Confidence 5
No 160
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.73 E-value=1e-18 Score=168.99 Aligned_cols=136 Identities=16% Similarity=0.162 Sum_probs=111.3
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|.+.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~ 85 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIV 85 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEE
Confidence 46899999999999999999996 679999999997542 233467899999999999999999999987743 455
Q ss_pred eeecccCCCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++||++|++.+.+... +.....++.|++.||+|||+ +++|.||++++++.++++|||++..
T Consensus 86 lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~ 157 (336)
T 3h4j_B 86 MVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI 157 (336)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBT
T ss_pred EEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEecccee
Confidence 67888888776655432 22344556899999999876 8999999999999999999998864
No 161
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=9.4e-19 Score=186.33 Aligned_cols=220 Identities=22% Similarity=0.191 Sum_probs=124.4
Q ss_pred CCCCEEECcCCCCCccCChhcccccc---ccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCC
Q 010856 5 KSLTLIYLSNNPLDGILPKTSVGNLS---HSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKL 81 (499)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~~l~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 81 (499)
+.++.|+|.+|.+...... .+..+. .++..+++..|.+. ..++.|..++.|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~~~~~-~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQA-LLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcchhh-HhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 4578899999988764222 111110 01222333334444 56888999999999999999998 556666699999
Q ss_pred CeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCc
Q 010856 82 QGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNF 161 (499)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~ 161 (499)
++|+|++|.|+ .+|..|..+++|++|+|++|.++ .+|..|..+++|++|+|++|.|+.+|..+..+++|+.|+|++|.
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSC
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCc
Confidence 99999999999 77889999999999999999999 66888999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCC-ccEEEccCCcccccCcccccCCcCCceeeCcCC--------cCCCCCCccccCCCCCCEEeCCCC
Q 010856 162 LTSPLPLEIGNLKV-LIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN--------RLQGSIPDSFGDLISLKFLNLSNN 232 (499)
Q Consensus 162 l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n--------~l~~~~~~~l~~l~~L~~L~l~~N 232 (499)
+++.+|..+..+.. +..+++++|.+++..|. .|+.|+++.| .+.+..+..+..+..+....+++|
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~N 401 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYN 401 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----------------------------------------
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeecc
Confidence 99888777655432 23478999999877665 4556667766 344444445566667777788888
Q ss_pred cCC
Q 010856 233 NLS 235 (499)
Q Consensus 233 ~l~ 235 (499)
-+.
T Consensus 402 il~ 404 (727)
T 4b8c_D 402 TLC 404 (727)
T ss_dssp CCC
T ss_pred ccc
Confidence 765
No 162
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.72 E-value=1.6e-18 Score=168.39 Aligned_cols=137 Identities=18% Similarity=0.209 Sum_probs=108.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..+.|...+.||+|+||+||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEE
Confidence 456799999999999999999995 579999999997654 234567899999999999999999999987633 4456
Q ss_pred eeccc-CCCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHS-SASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~-~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++ +|++.+.+... +.....++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 86 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 77777 44544444322 22344556899999999876 8999999999999999999998653
No 163
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=4.5e-17 Score=142.49 Aligned_cols=133 Identities=26% Similarity=0.271 Sum_probs=107.7
Q ss_pred CCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCC
Q 010856 129 LRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN 208 (499)
Q Consensus 129 L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 208 (499)
.+.+++++|+++.+|..+. ++|++|++++|.+++..+..+..+++|++|++++|.+++..+..|..+++|++|++++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4567777777777775443 67888888888888776677788888888888888888777777888888899999988
Q ss_pred cCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCC
Q 010856 209 RLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 209 ~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 263 (499)
.+++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887777778888899999999999887777777888899999999998887655
No 164
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=4e-18 Score=164.83 Aligned_cols=223 Identities=16% Similarity=0.118 Sum_probs=149.1
Q ss_pred cccEEEcccCCCc--ccCCccccCCCCCCEEeccCCcCCccCCccccC--------CCCCCeEecccccccccCCccccC
Q 010856 32 SLEDFRMYNCNIS--GGIPEEISNLTNSTIVNLGGNKLNGSIPITLSK--------LQKLQGLGLEDNKLEGSIPDDICH 101 (499)
Q Consensus 32 ~L~~L~l~~n~i~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--------l~~L~~L~L~~n~l~~~~~~~~~~ 101 (499)
+|+.|+|++|++. ...+..+ +.+..+.+..|. +.+.+|.+ +++|+.|+|.+ .++.+.+.+|.+
T Consensus 50 ~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~ 122 (329)
T 3sb4_A 50 SLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKG 122 (329)
T ss_dssp TCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTT
T ss_pred cCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhc
Confidence 5666666666665 2221111 123334444442 33456666 77777777777 666666667777
Q ss_pred cccccEEeeecCCCCCcCCccccCCccCCeeeccccC----CCCC-CccccCCCCCc-EEEc------------------
Q 010856 102 LAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNK----LTSV-PLTFWNLKDIL-NLNF------------------ 157 (499)
Q Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~----l~~~-~~~~~~l~~L~-~L~l------------------ 157 (499)
+++|+.|++.+|.+..+.+.+|.++.++..+.+..+. ...+ ...|.++..|+ .+.+
T Consensus 123 ~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~ 202 (329)
T 3sb4_A 123 CDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPR 202 (329)
T ss_dssp CTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGG
T ss_pred CcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCcc
Confidence 7777777777777776777777776666666655421 1111 12233444444 2322
Q ss_pred -------CCCcCCCCCcccc-cCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCC-EEe
Q 010856 158 -------SSNFLTSPLPLEI-GNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLK-FLN 228 (499)
Q Consensus 158 -------~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~-~L~ 228 (499)
.++- .......+ ..+++|+.+++++|+++.+.+..|.++++|++|++.+| ++.+.+..|.++++|+ .++
T Consensus 203 ~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 203 DINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp GCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 2221 00000001 13789999999999999888899999999999999998 8878888999999999 999
Q ss_pred CCCCcCCccCcccccCCCCCCEEEccCCcCcccCCC
Q 010856 229 LSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR 264 (499)
Q Consensus 229 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 264 (499)
+.+ .++.+.+.+|.++++|+.+++++|.++...+.
T Consensus 281 l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~ 315 (329)
T 3sb4_A 281 LPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDE 315 (329)
T ss_dssp ECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTT
T ss_pred Ecc-cceEEchhhhhCCccCCEEEeCCCccCccchh
Confidence 998 88888889999999999999999999865543
No 165
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.72 E-value=2.7e-18 Score=164.65 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=108.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.++|...+.||+|+||+||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..++++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEE
Confidence 46789999999999999999996 469999999986655556678999999999999999999999987633 445577
Q ss_pred cccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++.++ +.+.+.. .+.....++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 157 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARL 157 (310)
T ss_dssp ECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred EecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeeccccee
Confidence 777554 4333322 122234456899999998876 8999999999999999999998864
No 166
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.72 E-value=1.3e-18 Score=175.83 Aligned_cols=138 Identities=16% Similarity=0.102 Sum_probs=110.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccc----cc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT----FT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~----~~ 432 (499)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+++.+|+++++.++|||||++++++...+ ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999995 578999999997643 234567899999999999999999999986532 23
Q ss_pred eeeeeecccCCCcccccccc--ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVSS--LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~~--~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++|++.+++...+... +.....++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 45678899988866554322 22344556899999999876 8999999999999999999999864
No 167
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.72 E-value=1.1e-18 Score=173.10 Aligned_cols=143 Identities=13% Similarity=0.068 Sum_probs=111.4
Q ss_pred HHHHHHHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEc
Q 010856 353 YLELFRATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAV 428 (499)
Q Consensus 353 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~ 428 (499)
..++....++|...+.||+|+||+||+|+.+ +++.||+|++++.. ....+.+.+|+++++.++|||||++++++..
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999964 68999999997532 2334568899999999999999999999876
Q ss_pred cccceeeeeecccCCC-ccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 429 ITFTVCLCLFHHSSAS-ASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 429 ~~~~~~~~l~~~~~~~-~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.+ ..++++||+.|+ +...+.. .+...+.++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 141 ~~--~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 141 DR--YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SS--EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CC--EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 33 445678888554 4333221 223344556899999998876 8999999999999999999999864
No 168
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.72 E-value=1e-18 Score=165.74 Aligned_cols=135 Identities=17% Similarity=0.207 Sum_probs=108.8
Q ss_pred hhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
++|...+.||+|+||.||+|+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEE
Confidence 4688999999999999999998789999999996543 233477899999999999999999999987643 455678
Q ss_pred cccCCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
|++.+++...+... ......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (288)
T 1ob3_A 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARA 149 (288)
T ss_dssp ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred EecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccc
Confidence 88887654443321 22234456899999999876 8999999999999999999998753
No 169
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.71 E-value=2e-18 Score=169.76 Aligned_cols=136 Identities=18% Similarity=0.195 Sum_probs=101.6
Q ss_pred hhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.+|...+.||+|+||.||+|+.. ++..||||+++... ....+.|.+|++++++++||||+++++++...+ ..+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 122 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVM 122 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceE
Confidence 57889999999999999999853 57789999997653 234567999999999999999999999987633 445
Q ss_pred eeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++|++.+ .+.+.+... +.....++.|+++||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 67788754 444333221 12234456899999998876 89999999999999999999998753
No 170
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.71 E-value=3.3e-18 Score=168.20 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=108.1
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++.+.. ....+.+.+|+++++.++|||||++++++...+ ..+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~ 91 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMF 91 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 46799999999999999999996 468999999997543 344678899999999999999999999887643 345
Q ss_pred eeecccCCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++++++.|+ +...+... ......++.|++.||+|||+ ++||.||+++.++.++++|||++..+
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 567777554 43333322 22334456899999998876 89999999999999999999998753
No 171
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.71 E-value=4e-18 Score=164.56 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=106.3
Q ss_pred hhhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|.+.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 356888999999999999999963 34569999997653 334567999999999999999999999986633 44
Q ss_pred eeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 435 LCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++++|++.| ++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 567787755 443333221 22234456899999998876 89999999999999999999998754
No 172
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.71 E-value=2.3e-18 Score=170.51 Aligned_cols=140 Identities=15% Similarity=0.103 Sum_probs=104.5
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCC-CCCccccceeEEccccce
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIR-HRNLIKILHGVAVITFTV 433 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~~~~~~ 433 (499)
...++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.+++++. ||||+++++++...+...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999999995 579999999996542 234567889999999997 999999999987655545
Q ss_pred eeeeecccCCCcccccccc---ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSASASASLVSS---LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~~---~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.+++++++.+++...+... ......++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 86 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 6678899988765544321 12233446899999998876 8999999999999999999999864
No 173
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.71 E-value=3.9e-18 Score=165.13 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=108.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~ 81 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLC 81 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEE
Confidence 46799999999999999999996 479999999997642 344677899999999999999999999887643 445
Q ss_pred eeecccCCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++||+.|+ +...+... +...+.++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 154 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154 (337)
T ss_dssp EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhh
Confidence 577777654 43333222 22334456899999999876 8999999999999999999998763
No 174
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.71 E-value=3.6e-18 Score=164.68 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=105.4
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+ ..+++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEE
Confidence 467999999999999999999964 79999999997554 233466889999999999999999999987633 34456
Q ss_pred ecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|++.| ++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccce
Confidence 777755 444444332 22344556899999998876 8999999999999999999998864
No 175
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.71 E-value=8.4e-18 Score=164.30 Aligned_cols=136 Identities=16% Similarity=0.167 Sum_probs=107.1
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC------ccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG------RAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.+.|...+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 45699999999999999999996 4799999999976542 13578999999999999999999999987633
Q ss_pred eeeeeecccC-CCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC----CeEEEEEEEeec
Q 010856 433 VCLCLFHHSS-ASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP----GVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~-~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~----~~~~~~f~~~~~ 497 (499)
..++++|++. |++.+.+... +.....++.|++.||+|||+ +++|.||++.+++ .++++|||++..
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 4456777774 5554444322 22334456899999998876 8999999998776 699999999864
No 176
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.71 E-value=1.7e-18 Score=171.92 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=112.1
Q ss_pred CHHHHHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEE
Q 010856 352 SYLELFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVA 427 (499)
Q Consensus 352 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~ 427 (499)
.+++.....++|...+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|+.++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 4455556678999999999999999999996 479999999997542 223455889999999999999999999887
Q ss_pred ccccceeeeeecccC-CCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 428 VITFTVCLCLFHHSS-ASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 428 ~~~~~~~~~l~~~~~-~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
..+ ..++++||+. |++...+... +...+.++.|++.||+|||+ ++||.||+++.++.++++|||++
T Consensus 132 ~~~--~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 132 DEN--YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp CSS--EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eCC--EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 643 4456777774 4544444321 22234456889999998865 89999999999999999999988
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 210 ~~ 211 (412)
T 2vd5_A 210 LK 211 (412)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 177
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.9e-18 Score=165.12 Aligned_cols=138 Identities=16% Similarity=0.115 Sum_probs=106.7
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
+.|.+.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+....++++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56899999999999999999964 69999999997644 34467789999999999999999999998765444455677
Q ss_pred cccCC-Cccccccc-------cccccccccccccccceeecc------CCCcccEEE----eeCCCeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVS-------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVF----VLEPGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~-------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~----~~~~~~~~~~f~~~~~~ 498 (499)
|++.+ ++...+.. .+.....++.|++.||+|||+ +++|.||++ +.++.++++|||+++..
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 88755 44333322 122234456899999998876 899999998 44456999999998653
No 178
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.71 E-value=5.6e-18 Score=162.78 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=108.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~ 82 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIF 82 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEE
Confidence 46799999999999999999996 479999999997643 244677889999999999999999999987633 445
Q ss_pred eeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.| ++...+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~ 155 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY 155 (318)
T ss_dssp EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCccee
Confidence 67777755 444443322 22334456899999998876 8999999999999999999999864
No 179
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.70 E-value=3.1e-18 Score=168.27 Aligned_cols=136 Identities=19% Similarity=0.199 Sum_probs=104.8
Q ss_pred hhhcccccccccCCcceEEEEEe--------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcC-CCCCccccceeEEcc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL--------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNI-RHRNLIKILHGVAVI 429 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~ 429 (499)
.++|...+.||+|+||.||+|+. .++..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46799999999999999999984 235679999997654 23456799999999999 899999999998763
Q ss_pred ccceeeeeecccCC-Cccccccccc--------------------cccccccccccccceeecc------CCCcccEEEe
Q 010856 430 TFTVCLCLFHHSSA-SASASLVSSL--------------------TLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 430 ~~~~~~~l~~~~~~-~~~~~l~~~~--------------------~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
+ ..++++||+.| ++.+.+.... .....++.|+++||+|||+ ++||.||+++
T Consensus 160 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 160 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 237 (370)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred C--CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC
Confidence 3 34456777755 4444333211 1123346899999999876 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||+++.
T Consensus 238 ~~~~~kl~DFG~a~~ 252 (370)
T 2psq_A 238 ENNVMKIADFGLARD 252 (370)
T ss_dssp TTCCEEECCCSSCEE
T ss_pred CCCCEEEccccCCcc
Confidence 999999999999874
No 180
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.70 E-value=2.6e-18 Score=172.51 Aligned_cols=139 Identities=15% Similarity=0.170 Sum_probs=112.4
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccc---ce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF---TV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~---~~ 433 (499)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+. ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46799999999999999999996 468999999997543 2345779999999999999999999998866432 34
Q ss_pred eeeeecccCCCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 434 CLCLFHHSSASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++++|++++++...+.... ...+.++.|+++||+|||+ ++||.||+++.++.++++|||+++..
T Consensus 105 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 56678899887766554332 2344556899999999876 89999999999999999999998753
No 181
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=141.62 Aligned_cols=127 Identities=24% Similarity=0.303 Sum_probs=107.9
Q ss_pred cEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCc
Q 010856 106 YRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNN 185 (499)
Q Consensus 106 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 185 (499)
+.+++++|+++.+ |..+. ++|+.|++++|+++.+|..+..+++|+.|++++|.|+++.+..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4677777777743 43332 57888888888888888888888899999999999988888889999999999999999
Q ss_pred ccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCC
Q 010856 186 FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLS 235 (499)
Q Consensus 186 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~ 235 (499)
+++..+..|.++++|++|+|++|+++...+..|..+++|+.|++++|++.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 99888888999999999999999999777778999999999999999886
No 182
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.70 E-value=4.7e-18 Score=159.42 Aligned_cols=135 Identities=17% Similarity=0.113 Sum_probs=107.2
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeec
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFH 439 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~ 439 (499)
.++|+..+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++...+ ..+++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFE 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEE
Confidence 46789999999999999999998788899999997654 23567999999999999999999999987633 3456778
Q ss_pred ccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 440 HSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 440 ~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++.++ +.+.+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccc
Confidence 77655 3333322 122233446899999998876 8999999999999999999998764
No 183
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.70 E-value=4.4e-18 Score=166.94 Aligned_cols=146 Identities=10% Similarity=0.089 Sum_probs=114.9
Q ss_pred CHHHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCc-----------cHHHHHHHHHHHhcCCCCCcc
Q 010856 352 SYLELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGR-----------AFESFDVECEMMKNIRHRNLI 420 (499)
Q Consensus 352 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~il~~l~H~niv 420 (499)
..+++....++|...+.||+|+||.||+|...+|+.||+|++...... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456777888999999999999999999999878999999999543211 136799999999999999999
Q ss_pred ccceeEEccc---cceeeeeecccCCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCC
Q 010856 421 KILHGVAVIT---FTVCLCLFHHSSASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG 486 (499)
Q Consensus 421 ~l~~~~~~~~---~~~~~~l~~~~~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~ 486 (499)
++++++...+ ....+++++++.|++...+... ......++.|++.||+|||+ +++|.||+++.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND 172 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC
Confidence 9999986532 2245668888888766655422 22234456899999999876 89999999999999
Q ss_pred eEEEEEEEeec
Q 010856 487 VEVICFVFEIL 497 (499)
Q Consensus 487 ~~~~~f~~~~~ 497 (499)
++++|||++..
T Consensus 173 ~kl~Dfg~~~~ 183 (362)
T 3pg1_A 173 ITICDFNLARE 183 (362)
T ss_dssp EEECCTTC---
T ss_pred EEEEecCcccc
Confidence 99999998853
No 184
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.70 E-value=2.5e-18 Score=169.56 Aligned_cols=138 Identities=16% Similarity=0.180 Sum_probs=108.2
Q ss_pred HHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
...++|...+.||+|+||.||+|+.. +++.||||+++.... ...++|.+|++++++++||||+++++++...+ ..+
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 188 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIY 188 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcE
Confidence 44567999999999999999999975 789999999975432 23456889999999999999999999987633 345
Q ss_pred eeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.+ ++.+.+... ......++.|+++||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 67777754 444443321 22234456899999998866 8999999999999999999998764
No 185
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.70 E-value=5.4e-18 Score=162.35 Aligned_cols=140 Identities=21% Similarity=0.180 Sum_probs=104.4
Q ss_pred HHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 355 ELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 355 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
++....++|...+.||+|+||.||+|+. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 107 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-- 107 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--
Confidence 3344567899999999999999999987 67899999997654 233567899999999999999999999987643
Q ss_pred eeeeeecccCC-Ccccccccc-------ccccccccccccccceeecc--------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 433 VCLCLFHHSSA-SASASLVSS-------LTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~~-------~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
..+++++++.+ ++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||+++
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 34557777755 443333321 12233456889999987765 679999999999999999999986
Q ss_pred c
Q 010856 497 L 497 (499)
Q Consensus 497 ~ 497 (499)
.
T Consensus 188 ~ 188 (309)
T 3p86_A 188 L 188 (309)
T ss_dssp -
T ss_pred c
Confidence 4
No 186
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.70 E-value=9.4e-18 Score=160.58 Aligned_cols=148 Identities=24% Similarity=0.321 Sum_probs=116.2
Q ss_pred cccccCHHHHHHHhhhcccc------cccccCCcceEEEEEeCCCCEEEEEEeeccC----CccHHHHHHHHHHHhcCCC
Q 010856 347 TWRTFSYLELFRATDEFSEN------NLIGKGGFGSVYKARLGDRMEVAVKVFNLQC----GRAFESFDVECEMMKNIRH 416 (499)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~H 416 (499)
....|++.++..++.+|... +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999998877 8899999999999987 67899999996532 2345779999999999999
Q ss_pred CCccccceeEEccccceeeeeecccCC-Cccccccc-------cccccccccccccccceeecc------CCCcccEEEe
Q 010856 417 RNLIKILHGVAVITFTVCLCLFHHSSA-SASASLVS-------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 417 ~niv~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~-------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
|||+++++++...+ ..+++++++.+ .+.+.+.. .+.....++.|++.||+|||+ +++|.||+++
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD 167 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc
Confidence 99999999887633 34456777744 44333321 122233456889999998866 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||+++.
T Consensus 168 ~~~~~kl~Dfg~~~~ 182 (307)
T 2nru_A 168 EAFTAKISDFGLARA 182 (307)
T ss_dssp TTCCEEECCCTTCEE
T ss_pred CCCcEEEeecccccc
Confidence 999999999998764
No 187
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.69 E-value=6.6e-18 Score=164.45 Aligned_cols=136 Identities=15% Similarity=0.124 Sum_probs=108.4
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+. .+|+.||+|++.+.. ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 117 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLY 117 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEE
Confidence 46799999999999999999996 479999999997643 344678899999999999999999999887633 445
Q ss_pred eeecccC-CCccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSS-ASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~-~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++. |++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~ 190 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190 (350)
T ss_dssp EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccccee
Confidence 6777775 454444432 222344456899999998876 8999999999999999999999864
No 188
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.69 E-value=5.5e-18 Score=165.39 Aligned_cols=137 Identities=18% Similarity=0.226 Sum_probs=106.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-----CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-----GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
.+.|...+.||+|+||+||+|+. .+|+.||+|+++... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~ 100 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--M 100 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--E
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--E
Confidence 35799999999999999999996 479999999996532 224678999999999999999999999987633 4
Q ss_pred eeeeecccCCC-ccccccc--------cccccccccccccccceeecc------CCCcccEEEeeCCC---eEEEEEEEe
Q 010856 434 CLCLFHHSSAS-ASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG---VEVICFVFE 495 (499)
Q Consensus 434 ~~~l~~~~~~~-~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~---~~~~~f~~~ 495 (499)
.++++|++.|+ +...+.. .+.....++.|++.||+|||+ ++||.||+++.++. ++++|||++
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 45677777654 4333321 222334456899999999876 89999999987654 999999998
Q ss_pred ecc
Q 010856 496 ILL 498 (499)
Q Consensus 496 ~~~ 498 (499)
+..
T Consensus 181 ~~~ 183 (351)
T 3c0i_A 181 IQL 183 (351)
T ss_dssp EEC
T ss_pred eEe
Confidence 653
No 189
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.69 E-value=7.8e-18 Score=169.87 Aligned_cols=136 Identities=18% Similarity=0.100 Sum_probs=107.6
Q ss_pred HHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
...++|...+.||+|+||.||+|.. .|+.||||+++... ..+.|.+|++++++++|||||++++++...+. ..+++
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEE
Confidence 3457789999999999999999998 47799999997643 45789999999999999999999999876433 34456
Q ss_pred ecccCC-Ccccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|++.+ ++.+.+... ......++.|+++||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 777754 554444322 12234456899999998866 8999999999999999999998764
No 190
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.69 E-value=5.2e-18 Score=165.22 Aligned_cols=135 Identities=21% Similarity=0.215 Sum_probs=108.4
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 131 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWL 131 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEE
Confidence 4588899999999999999995 5799999999976542 23467899999999999999999999987633 4556
Q ss_pred eecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.|++.+.+.. .+.....++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 132 v~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 203 (348)
T 1u5q_A 132 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203 (348)
T ss_dssp EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred EEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCcee
Confidence 788888776554421 122234456899999999876 8999999999999999999998764
No 191
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=4.1e-17 Score=138.43 Aligned_cols=125 Identities=20% Similarity=0.154 Sum_probs=56.9
Q ss_pred cCCeeeccccCCC--CCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeC
Q 010856 128 SLRIVSLGSNKLT--SVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFL 205 (499)
Q Consensus 128 ~L~~L~L~~n~l~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 205 (499)
+|+.|++++|.++ .+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3334444444433 2333333444444444444444432 33444444444444444444434444444555555555
Q ss_pred cCCcCCCC-CCccccCCCCCCEEeCCCCcCCccCc---ccccCCCCCCEEEcc
Q 010856 206 GYNRLQGS-IPDSFGDLISLKFLNLSNNNLSGAIP---ASLEKLSYLENLNLS 254 (499)
Q Consensus 206 ~~n~l~~~-~~~~l~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~ 254 (499)
++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55555432 12445555555555555555554433 345555555555544
No 192
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.69 E-value=7.8e-18 Score=170.16 Aligned_cols=138 Identities=19% Similarity=0.192 Sum_probs=109.7
Q ss_pred HHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
....++|...+.||+|+||+||+|...++..||||+++... ...+.|.+|++++++++|||||++++++.. . ..++
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~--~-~~~l 259 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK--E-PIYI 259 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS--S-SCEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--C-ccEE
Confidence 34557799999999999999999998888899999997654 346789999999999999999999998753 2 3445
Q ss_pred eecccCC-Ccccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 437 LFHHSSA-SASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++|++.+ ++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 6777754 554444321 11233456899999999876 89999999999999999999998753
No 193
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.69 E-value=1e-17 Score=159.93 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=104.3
Q ss_pred hhcccccccccCCcceEEEEEe-----CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-----GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..|+..+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+....
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999999983 368899999997544 3446789999999999999999999999877543445
Q ss_pred eeeecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++++.+ ++.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 567777755 44333321 122234456899999998876 8999999999999999999998764
No 194
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=4.6e-17 Score=138.14 Aligned_cols=130 Identities=21% Similarity=0.216 Sum_probs=112.4
Q ss_pred CcccccEEeeecCCCC-CcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEE
Q 010856 101 HLAELYRLDLDGNKLS-GSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGI 179 (499)
Q Consensus 101 ~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 179 (499)
..++|+.|++++|.++ +..|..+..+++|+.|++++|.++.+ ..+..+++|++|++++|.+++..|..+..+++|++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 4578999999999998 67777888999999999999999988 678889999999999999998778888889999999
Q ss_pred EccCCccccc-CcccccCCcCCceeeCcCCcCCCCCC---ccccCCCCCCEEeCCC
Q 010856 180 DFSMNNFSGV-IPTEIGGLKNLEYLFLGYNRLQGSIP---DSFGDLISLKFLNLSN 231 (499)
Q Consensus 180 ~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~~ 231 (499)
++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999874 34778899999999999999987766 5788899999998864
No 195
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.69 E-value=1.9e-18 Score=169.22 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=111.4
Q ss_pred ccCHHHHHHHhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcC-CCCCccc
Q 010856 350 TFSYLELFRATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNI-RHRNLIK 421 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~H~niv~ 421 (499)
.+....+....++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 455666777788999999999999999999973 3468999999976542 3356799999999999 8999999
Q ss_pred cceeEEccccceeeeeecccCC-Ccccccccc------------------------------------------------
Q 010856 422 ILHGVAVITFTVCLCLFHHSSA-SASASLVSS------------------------------------------------ 452 (499)
Q Consensus 422 l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~------------------------------------------------ 452 (499)
+++++...+.. .++++|++.| ++.+.+...
T Consensus 91 ~~~~~~~~~~~-~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 91 LLGACTKPGGP-LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp EEEEECSTTSC-CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeecCCCc-eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 99998764332 3456666654 433332211
Q ss_pred ----------------------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 453 ----------------------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 453 ----------------------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+.....++.|+++||+|||+ ++||.||+++.++.++++|||++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 11122335789999999876 8999999999999999999998764
No 196
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.69 E-value=5.1e-18 Score=169.06 Aligned_cols=135 Identities=19% Similarity=0.177 Sum_probs=101.2
Q ss_pred hhccc-ccccccCCcceEEEEEeC---CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 361 DEFSE-NNLIGKGGFGSVYKARLG---DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~-~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
+.|.. .++||+|+||.||+|+.+ +++.||+|++.... ..+.+.+|++++++++|||||++++++...+....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34655 568999999999999954 57899999997543 2357889999999999999999999997644556677
Q ss_pred eecccCCCcccccc-------------ccccccccccccccccceeecc------CCCcccEEE----eeCCCeEEEEEE
Q 010856 437 LFHHSSASASASLV-------------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVF----VLEPGVEVICFV 493 (499)
Q Consensus 437 l~~~~~~~~~~~l~-------------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~----~~~~~~~~~~f~ 493 (499)
+++|+.+++...+. ..+.....++.|++.||+|||+ ++||.||++ ..++.++++|||
T Consensus 98 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 98 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp EEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred EEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 88998887655443 2222344556899999999876 899999999 566799999999
Q ss_pred Eeec
Q 010856 494 FEIL 497 (499)
Q Consensus 494 ~~~~ 497 (499)
+++.
T Consensus 178 ~a~~ 181 (405)
T 3rgf_A 178 FARL 181 (405)
T ss_dssp CCC-
T ss_pred Ccee
Confidence 9864
No 197
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.69 E-value=1e-17 Score=157.69 Aligned_cols=136 Identities=14% Similarity=0.153 Sum_probs=99.4
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 89 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EII 89 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEE
Confidence 35799999999999999999995 579999999997643 233567899999999999999999999987643 445
Q ss_pred eeecccCCCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++++++.+.+.... .....++.|++.||+|||+ +++|.||++++++.++++|||++..
T Consensus 90 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 161 (275)
T 2eue_A 90 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--
T ss_pred EEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeeccccee
Confidence 678888877666544332 2234456899999999876 8999999999999999999998754
No 198
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.69 E-value=8.5e-18 Score=159.85 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=106.4
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 88 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYL 88 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEE
Confidence 5699999999999999999995 4789999999965432 23467899999999999999999999987633 4456
Q ss_pred eecccCCC-ccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSAS-ASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~-~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.|+ +.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 89 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 77777654 4333322 222334456899999998876 8999999999999999999998754
No 199
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.69 E-value=5.9e-18 Score=164.96 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=107.0
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcC-CCCCccccceeEEccccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFT 432 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~ 432 (499)
...++|...+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|+++++.+ +||||+++++++...+
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~-- 97 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD-- 97 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--
Confidence 3457899999999999999999996 468999999997642 23456788999999988 7999999999887643
Q ss_pred eeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++||+.| ++...+.. .+...+.++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 34557777765 44333332 222344456899999999876 8999999999999999999998763
No 200
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.69 E-value=1.5e-17 Score=160.60 Aligned_cols=137 Identities=16% Similarity=0.193 Sum_probs=107.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC------ccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG------RAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.+.|...+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 87 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-- 87 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--
Confidence 35699999999999999999996 4699999999976532 13578999999999999999999999987633
Q ss_pred eeeeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC----CeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP----GVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~----~~~~~~f~~~~~ 497 (499)
..++++|++.| ++.+.+... +.....++.|++.||+|||+ +++|.||++.+++ .++++|||++..
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 88 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 44556777754 444433322 22334456899999999876 8999999998776 799999998865
Q ss_pred c
Q 010856 498 L 498 (499)
Q Consensus 498 ~ 498 (499)
.
T Consensus 168 ~ 168 (326)
T 2y0a_A 168 I 168 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 201
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.69 E-value=1.5e-17 Score=168.12 Aligned_cols=137 Identities=17% Similarity=0.179 Sum_probs=108.9
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~ 92 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIF 92 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 467999999999999999999964 79999999997543 233567899999999999999999999987643 445
Q ss_pred eeecccC-CCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSS-ASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~-~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++|++. |++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||++...
T Consensus 93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 5777774 4544444322 22334456899999999876 89999999999999999999998653
No 202
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.69 E-value=8.4e-18 Score=162.49 Aligned_cols=138 Identities=16% Similarity=0.086 Sum_probs=109.9
Q ss_pred hhhcccccccccCCcceEEEEEe-----CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-----GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|+..+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35789999999999999999983 3688999999987655556779999999999999999999998876444555
Q ss_pred eeeecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.++ +.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence 6678888554 4333322 222334456899999998876 8999999999999999999998864
No 203
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.68 E-value=9.1e-18 Score=163.92 Aligned_cols=138 Identities=16% Similarity=0.191 Sum_probs=109.8
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccc------
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT------ 430 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~------ 430 (499)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999996 579999999986544 233567889999999999999999999987632
Q ss_pred cceeeeeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 431 FTVCLCLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
....++++|++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 123556788888765544332 222344556899999999876 8999999999999999999998764
No 204
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.68 E-value=7e-18 Score=167.45 Aligned_cols=138 Identities=16% Similarity=0.115 Sum_probs=106.6
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
+.|.+.+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+....++++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56899999999999999999964 69999999997544 34467788999999999999999999998765444455677
Q ss_pred cccCC-Ccccccccc-------ccccccccccccccceeecc------CCCcccEEE----eeCCCeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVSS-------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVF----VLEPGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~~-------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~----~~~~~~~~~~f~~~~~~ 498 (499)
|++.| ++...+... +.....++.|++.||+|||+ ++||.||++ +.++.++++|||+++.+
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 87755 443333321 22234456899999998876 899999998 44456999999998753
No 205
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.68 E-value=8.7e-18 Score=163.02 Aligned_cols=138 Identities=16% Similarity=0.222 Sum_probs=103.9
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--------CccHHHHHHHHHHHhcCC---------CCCcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--------GRAFESFDVECEMMKNIR---------HRNLIKI 422 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~il~~l~---------H~niv~l 422 (499)
.++|...+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999998 78999999997653 123478899999998885 7777777
Q ss_pred ceeEEcc----------------------------ccceeeeeecccCCC-ccccccc---cccccccccccccccceee
Q 010856 423 LHGVAVI----------------------------TFTVCLCLFHHSSAS-ASASLVS---SLTLSRPAKGGGFRGCVLW 470 (499)
Q Consensus 423 ~~~~~~~----------------------------~~~~~~~l~~~~~~~-~~~~l~~---~~~~~~~~~~~i~~gl~yL 470 (499)
.+++... +....++++||+.++ +.+.+.. .....+.++.|++.||+||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 7654310 123455677776544 5555432 2233455568999999999
Q ss_pred c-c------CCCcccEEEeeCC--------------------CeEEEEEEEeecc
Q 010856 471 H-V------GVDFAAFVFVLEP--------------------GVEVICFVFEILL 498 (499)
Q Consensus 471 H-~------~~~p~~~l~~~~~--------------------~~~~~~f~~~~~~ 498 (499)
| + |+||.||+++.++ .++++|||+++..
T Consensus 178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~ 232 (336)
T 2vuw_A 178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE 232 (336)
T ss_dssp HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence 8 4 8999999999886 8999999998753
No 206
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.68 E-value=1.4e-17 Score=162.23 Aligned_cols=140 Identities=17% Similarity=0.213 Sum_probs=107.3
Q ss_pred HHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-----CccHHHHHHHHHHHhcCCCCCccccceeEEcc
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-----GRAFESFDVECEMMKNIRHRNLIKILHGVAVI 429 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~ 429 (499)
+....++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445667899999999999999999996 578999999997542 34467899999999999999999999998763
Q ss_pred ccceeeeeecccCC-Cccccccc--------------------------------------------ccccccccccccc
Q 010856 430 TFTVCLCLFHHSSA-SASASLVS--------------------------------------------SLTLSRPAKGGGF 464 (499)
Q Consensus 430 ~~~~~~~l~~~~~~-~~~~~l~~--------------------------------------------~~~~~~~~~~~i~ 464 (499)
+ ...+++|++.| ++.+.+.. .+.....++.|++
T Consensus 101 ~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 101 Q--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp S--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred C--eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 3 44556777754 44333321 1111233567999
Q ss_pred ccceeecc------CCCcccEEEeeCC--CeEEEEEEEeec
Q 010856 465 RGCVLWHV------GVDFAAFVFVLEP--GVEVICFVFEIL 497 (499)
Q Consensus 465 ~gl~yLH~------~~~p~~~l~~~~~--~~~~~~f~~~~~ 497 (499)
.||+|||+ +++|.||+++.++ .++++|||++..
T Consensus 179 ~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~ 219 (345)
T 3hko_A 179 SALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE 219 (345)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEE
T ss_pred HHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccc
Confidence 99998876 8999999997665 899999998764
No 207
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.68 E-value=9.9e-18 Score=164.39 Aligned_cols=138 Identities=17% Similarity=0.160 Sum_probs=98.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcc----ccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVI----TFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~----~~~ 432 (499)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++... +..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46799999999999999999995 579999999996543 23456788999999999999999999998652 223
Q ss_pred eeeeeecccCCCccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++++++...+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 4566788887766554432 122234456899999999876 8999999999999999999999864
No 208
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.68 E-value=7.7e-18 Score=166.18 Aligned_cols=137 Identities=11% Similarity=0.100 Sum_probs=106.2
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcC-CCCCccccceeEEccccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~ 433 (499)
...+|...+.||+|+||+||+|+.+ +++.||+|++++.. ....+.+.+|..++.++ +|||||++++++...+ .
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~ 127 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--R 127 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--E
Confidence 3568999999999999999999964 68899999998653 23345688999999876 8999999999887633 4
Q ss_pred eeeeecccCCC-ccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSAS-ASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~~-~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.++++||+.|+ +...+.. .+...+.++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 45677777654 4333332 223344556899999999876 8999999999999999999998763
No 209
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.68 E-value=1.4e-17 Score=156.05 Aligned_cols=136 Identities=17% Similarity=0.108 Sum_probs=107.8
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
..++|...+.||+|+||.||+|+..++..||+|++.... ...+++.+|++++++++||||+++++++.... ..++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVT 82 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEE
Confidence 346799999999999999999998888899999997654 23567999999999999999999999886532 345677
Q ss_pred cccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++.++ +.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCcccee
Confidence 777555 4333322 222334456899999998876 8999999999999999999998864
No 210
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.68 E-value=1.1e-17 Score=171.56 Aligned_cols=138 Identities=10% Similarity=0.098 Sum_probs=108.5
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+. .+|+.||+|++.+.. ......+.+|+++++.++|||||++++++...+ ..
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l 259 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--AL 259 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EE
Confidence 346799999999999999999996 479999999997643 334567899999999999999999999887643 45
Q ss_pred eeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 435 LCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++++||+.| ++...+.. .+.....++.||+.||+|||+ ++||.||+++.++.++++|||++...
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 567787755 44333322 122234446899999998876 89999999999999999999998643
No 211
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.68 E-value=1.5e-17 Score=160.33 Aligned_cols=137 Identities=18% Similarity=0.142 Sum_probs=104.9
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccc--ceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITF--TVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~--~~~~~ 436 (499)
...+|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++..... ...++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3467999999999999999999874 7899999996543 234456779999999999999999999876432 23456
Q ss_pred eecccCC-Cccccccc---cccccccccccccccceeecc----------------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 437 LFHHSSA-SASASLVS---SLTLSRPAKGGGFRGCVLWHV----------------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~----------------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
++|++.+ ++.+.+.. .+.....++.|+++||+|||+ ++||.||+++.++.++++|||+++
T Consensus 100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 7777755 44433322 223344556888898877764 589999999999999999999986
Q ss_pred c
Q 010856 497 L 497 (499)
Q Consensus 497 ~ 497 (499)
.
T Consensus 180 ~ 180 (322)
T 3soc_A 180 K 180 (322)
T ss_dssp E
T ss_pred c
Confidence 4
No 212
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.68 E-value=1.1e-17 Score=165.32 Aligned_cols=138 Identities=17% Similarity=0.126 Sum_probs=103.8
Q ss_pred HHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccc-----
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVIT----- 430 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~----- 430 (499)
.....+|...+.||+|+||+||+|+. .+|+.||+|++..... ...+|+++++.++|||||++++++....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999995 5799999999975432 2337999999999999999999885421
Q ss_pred -------------------------------cceeeeeecccCCCccccccc--------cccccccccccccccceeec
Q 010856 431 -------------------------------FTVCLCLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWH 471 (499)
Q Consensus 431 -------------------------------~~~~~~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH 471 (499)
.....+++|++.+++.+.+.. .+.....++.|+++||+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp -------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123556888988775444331 12234445689999999887
Q ss_pred c------CCCcccEEEe-eCCCeEEEEEEEeecc
Q 010856 472 V------GVDFAAFVFV-LEPGVEVICFVFEILL 498 (499)
Q Consensus 472 ~------~~~p~~~l~~-~~~~~~~~~f~~~~~~ 498 (499)
+ ++||.||+++ .++.++++|||++..+
T Consensus 159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 192 (383)
T 3eb0_A 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192 (383)
T ss_dssp TTTEECSCCCGGGEEEETTTTEEEECCCTTCEEC
T ss_pred HCcCccCccCHHHEEEcCCCCcEEEEECCCCccc
Confidence 6 8999999998 5678999999998753
No 213
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.68 E-value=1.2e-17 Score=162.46 Aligned_cols=136 Identities=12% Similarity=0.092 Sum_probs=106.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---ccHHHHHHHHHHHhcC-CCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---RAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++.+... ...+.+.+|++++.++ +||||+++++++...+ ..
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~ 85 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RL 85 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EE
Confidence 46799999999999999999996 4689999999986542 2345688999999987 8999999999987633 44
Q ss_pred eeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.| ++...+... +...+.++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 567777755 443333322 22344456899999999876 8999999999999999999998763
No 214
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.68 E-value=1.7e-17 Score=162.45 Aligned_cols=138 Identities=15% Similarity=0.270 Sum_probs=107.4
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--ccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
...++|...+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~ 103 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FH 103 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EE
Confidence 3456899999999999999999996 4699999999976542 33567899999999999999999999987633 44
Q ss_pred eeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~~~~ 497 (499)
++++|++.| .+.+.+... +.....++.|++.||+|||+ +++|.||+++.++ .++++|||+++.
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 557777755 444443322 22234456899999999876 8999999997654 499999999864
No 215
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.68 E-value=2.3e-17 Score=156.20 Aligned_cols=135 Identities=19% Similarity=0.246 Sum_probs=106.0
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
+.|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++++
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEE
Confidence 5799999999999999999996 468999999997654 344678999999999999999999999987633 455677
Q ss_pred cccCC-Ccccccc--------ccccccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeec
Q 010856 439 HHSSA-SASASLV--------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~-~~~~~l~--------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~ 497 (499)
|++.+ ++.+.+. ........++.|+++||+|||+ +++|.||++.+ ++.++++|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 77765 4433332 1222344556899999998876 89999999943 46799999999864
No 216
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=4.1e-16 Score=136.32 Aligned_cols=129 Identities=26% Similarity=0.307 Sum_probs=66.1
Q ss_pred ccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeec
Q 010856 33 LEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDG 112 (499)
Q Consensus 33 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 112 (499)
.+.+++++++++.+ |..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 34444555544422 2211 13455555555555544444445555555555555555544444455555555555555
Q ss_pred CCCCCcCCccccCCccCCeeeccccCCCCCCcc-ccCCCCCcEEEcCCCcCCC
Q 010856 113 NKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLT-FWNLKDILNLNFSSNFLTS 164 (499)
Q Consensus 113 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~ 164 (499)
|++++..+..|..+++|+.|++++|+++.+|.. +..+++|++|++++|.+.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 555554444555555555555555555555443 3445566666666665554
No 217
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.68 E-value=9.6e-18 Score=171.19 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=108.6
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
...+|...+.||+|+||.||+|+.. ++..||||+++... ...++|.+|++++++++|||||+++++|...+ ..+++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 4567899999999999999999975 48899999997654 34678999999999999999999999987633 44567
Q ss_pred ecccC-CCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 438 FHHSS-ASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 438 ~~~~~-~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+|++. |++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence 77776 4544444321 12233446899999998866 89999999999999999999998754
No 218
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.68 E-value=1.8e-17 Score=162.28 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=105.3
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..++|...+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++...+ ..+++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEE
Confidence 3467999999999999999999964 799999999976542 3467889999999999999999999987643 44567
Q ss_pred ecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCC--eEEEEEEEee
Q 010856 438 FHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG--VEVICFVFEI 496 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~--~~~~~f~~~~ 496 (499)
++|+.| ++...+.. .......++.|++.||+|||+ ++||.||+++.++. ++++|||+++
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence 777754 44333322 223344556899999998876 89999999976654 9999999875
No 219
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.68 E-value=3.3e-18 Score=165.13 Aligned_cols=135 Identities=15% Similarity=0.166 Sum_probs=105.5
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
++|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++...+ ..++++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEe
Confidence 46889999999999999999964 789999999965432 22234568999999999999999999987633 445678
Q ss_pred cccCCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
|++.|++...+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 149 (324)
T 3mtl_A 80 EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARA 149 (324)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEEC
T ss_pred cccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCccccc
Confidence 88888765554322 12234446899999998876 8999999999999999999999864
No 220
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.68 E-value=1e-17 Score=160.76 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=106.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---ccHHHHHHHHHHHhcCCCCCccccceeEEccccc--e
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---RAFESFDVECEMMKNIRHRNLIKILHGVAVITFT--V 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~--~ 433 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++...+.. .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36799999999999999999995 5789999999976542 2245789999999999999999999988653322 2
Q ss_pred eeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.++++|++.| .+.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 2557777755 44333322 222344556899999999876 8999999999999999999998764
No 221
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.68 E-value=4.7e-18 Score=167.65 Aligned_cols=138 Identities=12% Similarity=0.030 Sum_probs=105.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHH---HHHhcCCCCCccccc-------ee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVEC---EMMKNIRHRNLIKIL-------HG 425 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~---~il~~l~H~niv~l~-------~~ 425 (499)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999995 579999999997542 34467899999 556667899999998 44
Q ss_pred EEcccc---------------ceeeeeecccCCCccccccccc-----------cccccccccccccceeecc------C
Q 010856 426 VAVITF---------------TVCLCLFHHSSASASASLVSSL-----------TLSRPAKGGGFRGCVLWHV------G 473 (499)
Q Consensus 426 ~~~~~~---------------~~~~~l~~~~~~~~~~~l~~~~-----------~~~~~~~~~i~~gl~yLH~------~ 473 (499)
+..... ...++++|+++|++.+.+.... .....++.|++.||+|||+ +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 432210 0244577888877666554322 2233456899999999876 8
Q ss_pred CCcccEEEeeCCCeEEEEEEEeec
Q 010856 474 VDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 474 ~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+||.||+++.++.++++|||+++.
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~ 255 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVR 255 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEE
T ss_pred CCHHHEEEcCCCCEEEEechhhee
Confidence 999999999999999999998863
No 222
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.68 E-value=9.8e-18 Score=162.76 Aligned_cols=139 Identities=14% Similarity=0.167 Sum_probs=108.0
Q ss_pred HHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcC-CCCCccccceeEEcccc
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITF 431 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~ 431 (499)
....++|...+.||+|+||+||+|+. .+|+.||+|++++.. ....+.+.+|.+++..+ +||||+++++++...+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~- 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE- 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC-
Confidence 35567899999999999999999996 468999999997643 33456788999999876 9999999999887643
Q ss_pred ceeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 432 TVCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 432 ~~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++||+.| ++...+.. .+.....++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 92 -~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 92 -NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 44567777754 54443332 222344456899999999876 8999999999999999999998763
No 223
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.68 E-value=6.8e-18 Score=165.65 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=102.6
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccc----cc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT----FT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~----~~ 432 (499)
.+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|+++++.++||||+++++++...+ ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999996 579999999996543 223567899999999999999999999986532 23
Q ss_pred eeeeeecccCCCccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++++++...+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 4466788886655443322 122234456899999999876 8999999999999999999999864
No 224
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.68 E-value=1.8e-17 Score=156.73 Aligned_cols=137 Identities=13% Similarity=0.091 Sum_probs=105.2
Q ss_pred HHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
...++|...+.||+|+||.||+|...++..||+|++.... ...+++.+|++++++++||||+++++++...+ ..+++
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 97 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFII 97 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEE
Confidence 3456799999999999999999998888899999997654 23477999999999999999999999886533 34567
Q ss_pred ecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccc
Confidence 777754 44333322 122234456899999998876 8999999999999999999998764
No 225
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.68 E-value=1.1e-17 Score=164.46 Aligned_cols=138 Identities=15% Similarity=0.076 Sum_probs=108.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccc----c
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF----T 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~----~ 432 (499)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+. .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46799999999999999999996 478999999997643 2335678899999999999999999999865332 2
Q ss_pred eeeeeecccCCCccccccc--cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVS--SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~--~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++|++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 4567889988876554432 222334456899999999876 8999999999999999999999864
No 226
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.67 E-value=9.7e-18 Score=160.81 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=104.8
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC--ccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG--RAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~ 436 (499)
++|...+.||+|+||+||+|+.. +|+.||||++..... .....+.+|+..+.++ +||||+++++++... ...++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~--~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG--GILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC--CEEEE
Confidence 57999999999999999999975 799999999865432 2334556666665554 999999999998763 34566
Q ss_pred eecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++++++...+.. .+.....++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 135 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 135 QTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred EEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence 888888776554432 222344556899999999876 8999999999999999999998764
No 227
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.67 E-value=1.4e-17 Score=163.61 Aligned_cols=133 Identities=16% Similarity=0.191 Sum_probs=97.9
Q ss_pred ccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeecccC
Q 010856 364 SENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFHHSS 442 (499)
Q Consensus 364 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~~~~ 442 (499)
...+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++...+ ..++++|++.
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCCC
Confidence 3357899999999999996 579999999998765455678999999999999999999999987643 4556778876
Q ss_pred CC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEee--CCCeEEEEEEEeecc
Q 010856 443 AS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL--EPGVEVICFVFEILL 498 (499)
Q Consensus 443 ~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~--~~~~~~~~f~~~~~~ 498 (499)
++ +.+.+.. .+.....++.|+++||+|||+ +++|.||++.+ ++.++++|||+++..
T Consensus 170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 54 3333321 122233446799999998876 89999999854 457999999998753
No 228
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.67 E-value=1.7e-17 Score=159.76 Aligned_cols=136 Identities=13% Similarity=0.170 Sum_probs=106.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.++|...+.||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|+++++.++||||+++++++...+ ..++++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEE
Confidence 36799999999999999999996 468999999987543 34567889999999999999999999987643 445677
Q ss_pred cccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEee--CCCeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL--EPGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~--~~~~~~~~f~~~~~~ 498 (499)
|++.| ++.+.+... +.....++.|++.||+|||+ +++|.||+++. ++.++++|||+++..
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 77755 444433321 22234456899999999876 89999999986 679999999998653
No 229
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.67 E-value=1.3e-17 Score=161.05 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=99.6
Q ss_pred hhhcccccccccCCcceEEEEEe----CCCCEEEEEEeeccC----CccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL----GDRMEVAVKVFNLQC----GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
.++|...+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 46799999999999999999996 468999999997643 223456889999999999999999999987633
Q ss_pred ceeeeeecccCCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 432 TVCLCLFHHSSAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 432 ~~~~~l~~~~~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++|++.|+ +...+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 95 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 -KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp -CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred -EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 345577777544 43333222 22233446899999998876 8999999999999999999998753
No 230
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.67 E-value=8.2e-18 Score=162.68 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=105.2
Q ss_pred HHHHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccc
Q 010856 354 LELFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT 430 (499)
Q Consensus 354 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~ 430 (499)
.......++|...+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (329)
T 3gbz_A 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH 106 (329)
T ss_dssp -----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT
T ss_pred CCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC
Confidence 33445667899999999999999999995 578999999997544 223456889999999999999999999987633
Q ss_pred cceeeeeecccCCCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCC-----CeEEEEEEEe
Q 010856 431 FTVCLCLFHHSSASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP-----GVEVICFVFE 495 (499)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~-----~~~~~~f~~~ 495 (499)
..++++|++.|++.+.+.... .....++.|++.||+|||+ ++||.||++..++ .++++|||++
T Consensus 107 --~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 107 --RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp --EEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred --EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 456678888887655544322 2234456899999999876 8999999995443 4999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
+.
T Consensus 185 ~~ 186 (329)
T 3gbz_A 185 RA 186 (329)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 231
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.67 E-value=2.1e-17 Score=162.97 Aligned_cols=137 Identities=15% Similarity=0.130 Sum_probs=107.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.+.|...+.||+|+||.||+|.. .+|+.||+|++..........+.+|++++++++||||+++++++... ...++++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--SEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC--CEEEEEE
Confidence 35799999999999999999996 47899999999866544556789999999999999999999998763 3445577
Q ss_pred cccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEee--CCCeEEEEEEEeecc
Q 010856 439 HHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL--EPGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~--~~~~~~~~f~~~~~~ 498 (499)
|++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++. ++.++++|||++..+
T Consensus 128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence 77755 44343332 122234456899999999876 89999999974 357999999998653
No 232
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.9e-17 Score=159.93 Aligned_cols=139 Identities=19% Similarity=0.146 Sum_probs=107.8
Q ss_pred hhhcccccccccCCcceEEEEEe-----CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-----GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|...+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+....
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46689999999999999999983 3688999999987655566789999999999999999999998866443344
Q ss_pred eeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 435 LCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++++++.+ ++.+.+... +.....++.|+++||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 567777755 443333221 12233446899999998876 89999999999999999999988653
No 233
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.67 E-value=2.1e-17 Score=165.89 Aligned_cols=138 Identities=15% Similarity=0.214 Sum_probs=105.9
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
...++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|||||++++++...+ ..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EE
Confidence 3457799999999999999999995 579999999997654 234567899999999999999999999987633 44
Q ss_pred eeeecccCC-Cccccccccc----cccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~ 497 (499)
++++|++.| ++.+.+.... .....++.|++.||+|||+ ++||.||+++. ++.++++|||+++.
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 556777755 4444443222 2234456899999999876 89999999984 46799999999864
No 234
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.67 E-value=1.6e-17 Score=160.23 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=98.5
Q ss_pred HHhhhcccccccccCCcceEEEEEeC-CC---CEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG-DR---MEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~---~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
...++|...+.||+|+||.||+|+.. ++ ..||+|+++... ....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34567999999999999999999964 33 379999997653 3446789999999999999999999999876432
Q ss_pred c----eeeeeecccCC-Ccccccc----------ccccccccccccccccceeecc------CCCcccEEEeeCCCeEEE
Q 010856 432 T----VCLCLFHHSSA-SASASLV----------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVI 490 (499)
Q Consensus 432 ~----~~~~l~~~~~~-~~~~~l~----------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~ 490 (499)
. ..+.+++++.+ ++...+. ..+.....++.|+++||+|||+ ++||.||+++.++.++++
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe
Confidence 2 12456666655 4433332 1222334456899999999876 899999999999999999
Q ss_pred EEEEeec
Q 010856 491 CFVFEIL 497 (499)
Q Consensus 491 ~f~~~~~ 497 (499)
|||+++.
T Consensus 180 Dfg~a~~ 186 (323)
T 3qup_A 180 DFGLSRK 186 (323)
T ss_dssp CCCC---
T ss_pred ecccccc
Confidence 9999864
No 235
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.67 E-value=1.4e-17 Score=168.17 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=107.9
Q ss_pred HHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
...++|...+.||+|+||.||+|...++..||||+++... ...++|.+|++++++++||||+++++++.. + ..+++
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv 256 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIV 256 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEE
Confidence 4456789999999999999999998777889999997654 345789999999999999999999998865 2 34457
Q ss_pred ecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|++.+ ++.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcccee
Confidence 777755 54444432 112234456899999998876 8999999999999999999999864
No 236
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.67 E-value=1.2e-17 Score=163.90 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=110.8
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccc---cce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVIT---FTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~---~~~ 433 (499)
..+.|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.... ...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 345799999999999999999996 4788999999975442 33467899999999999999999999886532 134
Q ss_pred eeeeecccCCCccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 434 CLCLFHHSSASASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.+++++++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 105 ~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 566888888876554432 222344456899999998876 89999999999999999999998653
No 237
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.67 E-value=1.8e-17 Score=157.06 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=106.3
Q ss_pred hhhcccccccccCCcceEEEEEeC-CC-------CEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DR-------MEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
.++|...+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 357899999999999999999853 34 579999997766566788999999999999999999999987633
Q ss_pred ceeeeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCC--------eEEEE
Q 010856 432 TVCLCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG--------VEVIC 491 (499)
Q Consensus 432 ~~~~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~--------~~~~~ 491 (499)
..++++|++.| ++.+.+... ......++.|++.||+|||+ +++|.||+++.++. ++++|
T Consensus 86 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 86 -ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp -CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred -CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 33457777764 444433322 12234456899999999876 89999999988876 99999
Q ss_pred EEEeec
Q 010856 492 FVFEIL 497 (499)
Q Consensus 492 f~~~~~ 497 (499)
||++..
T Consensus 165 fg~~~~ 170 (289)
T 4fvq_A 165 PGISIT 170 (289)
T ss_dssp CCSCTT
T ss_pred Cccccc
Confidence 998753
No 238
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.67 E-value=9.8e-18 Score=164.58 Aligned_cols=135 Identities=15% Similarity=0.178 Sum_probs=102.3
Q ss_pred hhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.++|...+.||+|+||+||+|+. .+++.||||+++... .....++.+|+.++++++|||||++++++...+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 35789999999999999999994 246789999997543 334567899999999999999999999987633
Q ss_pred eeeeeecccCC-Cccccccccc-----------cccccccccccccceeecc------CCCcccEEEeeCC---CeEEEE
Q 010856 433 VCLCLFHHSSA-SASASLVSSL-----------TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVIC 491 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~~~-----------~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~ 491 (499)
..++++|++.| ++.+.+.... .....++.|++.||+|||+ ++||.||+++.++ .++++|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 33456777754 5444333211 1223456899999999876 8999999998554 499999
Q ss_pred EEEee
Q 010856 492 FVFEI 496 (499)
Q Consensus 492 f~~~~ 496 (499)
||+++
T Consensus 228 FG~a~ 232 (367)
T 3l9p_A 228 FGMAR 232 (367)
T ss_dssp CHHHH
T ss_pred Ccccc
Confidence 99875
No 239
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.67 E-value=1.3e-17 Score=164.78 Aligned_cols=136 Identities=20% Similarity=0.202 Sum_probs=105.1
Q ss_pred hhhcccccccccCCcceEEEEEe--------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcC-CCCCccccceeEEcc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL--------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNI-RHRNLIKILHGVAVI 429 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~ 429 (499)
.++|...+.||+|+||.||+|+. ..+..||+|+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46789999999999999999984 123579999997654 23457799999999999 999999999998763
Q ss_pred ccceeeeeecccCC-Cccccccc--------------------cccccccccccccccceeecc------CCCcccEEEe
Q 010856 430 TFTVCLCLFHHSSA-SASASLVS--------------------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 430 ~~~~~~~l~~~~~~-~~~~~l~~--------------------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
+ ..++++|++.+ ++.+.+.. .+.....++.|++.||+|||+ ++||.||+++
T Consensus 148 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 148 G--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 225 (382)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred C--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc
Confidence 3 34556777755 44433322 112233446899999999876 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||+++.
T Consensus 226 ~~~~~kL~DFG~a~~ 240 (382)
T 3tt0_A 226 EDNVMKIADFGLARD 240 (382)
T ss_dssp TTCCEEECSCSCCCC
T ss_pred CCCcEEEcccCcccc
Confidence 999999999999864
No 240
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.67 E-value=1.2e-17 Score=162.74 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=102.6
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-----ccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-----RAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
...++|...+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC-
Confidence 3456799999999999999999996 4699999999975431 11356889999999999999999999986633
Q ss_pred ceeeeeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 432 TVCLCLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 432 ~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++.+++...+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 86 -~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 -NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp -CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred -ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 4456788888765444332 222334456899999998876 8999999999999999999998764
No 241
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.67 E-value=3.8e-17 Score=157.24 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=105.8
Q ss_pred cccccccccCCcceEEEEEe-----CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 363 FSENNLIGKGGFGSVYKARL-----GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 363 ~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
|...+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|++++++++||||+++++++...+....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999999874 2588999999976542 34567999999999999999999999988754445566
Q ss_pred eecccCCC-ccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSAS-ASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~-~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++.++ +.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 78887654 4333322 222334456899999998866 8999999999999999999998864
No 242
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.67 E-value=3.3e-17 Score=154.31 Aligned_cols=136 Identities=18% Similarity=0.233 Sum_probs=108.3
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.+.|...+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++... ...++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN--TDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CeEEEEE
Confidence 467999999999999999999964 6889999999876656678899999999999999999999998763 3445677
Q ss_pred cccCCC-ccccccc----cccccccccccccccceeecc------CCCcccEEE---eeCCCeEEEEEEEeec
Q 010856 439 HHSSAS-ASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVF---VLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~-~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~---~~~~~~~~~~f~~~~~ 497 (499)
+++.++ +.+.+.. .+.....++.|++.||+|||+ +++|.||++ ..++.++++|||++..
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 777554 3333322 222344556899999998876 899999999 6678999999998764
No 243
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.67 E-value=7.8e-18 Score=162.67 Aligned_cols=136 Identities=17% Similarity=0.125 Sum_probs=99.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCE----EEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRME----VAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
.++|...+.||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS--E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--e
Confidence 35699999999999999999995 34544 5777775433 345678999999999999999999999998643 3
Q ss_pred eeeeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.++++++.+|++.+.+.. .+.....++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 444445555555544432 122234456899999999876 8999999999999999999998764
No 244
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.67 E-value=2.1e-17 Score=163.78 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=107.2
Q ss_pred HhhhcccccccccC--CcceEEEEEeC-CCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 359 ATDEFSENNLIGKG--GFGSVYKARLG-DRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
..++|+..+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+ .
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 100 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--E 100 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--E
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--E
Confidence 44679999999999 99999999964 79999999997654 233567889999999999999999999987633 4
Q ss_pred eeeeecccCCCccc-cccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 434 CLCLFHHSSASASA-SLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 434 ~~~l~~~~~~~~~~-~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
.+++++++.++.+. .+.. .+.....++.|++.||+|||+ ++||.||+++.++.++++|||.+.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 55677777654333 3221 122234456899999998876 899999999999999999999764
No 245
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.67 E-value=1.6e-17 Score=159.41 Aligned_cols=138 Identities=16% Similarity=0.132 Sum_probs=105.9
Q ss_pred HHhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVIT 430 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~ 430 (499)
....+|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3456799999999999999999984 245789999997654 234577899999999999999999999886633
Q ss_pred cceeeeeecccC-CCcccccccc----------------------------ccccccccccccccceeecc------CCC
Q 010856 431 FTVCLCLFHHSS-ASASASLVSS----------------------------LTLSRPAKGGGFRGCVLWHV------GVD 475 (499)
Q Consensus 431 ~~~~~~l~~~~~-~~~~~~l~~~----------------------------~~~~~~~~~~i~~gl~yLH~------~~~ 475 (499)
..+++++++. +++.+.+... ......++.|+++||+|||+ +++
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik 177 (314)
T 2ivs_A 100 --PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA 177 (314)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred --ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence 3455677775 4443333221 11223446899999998876 899
Q ss_pred cccEEEeeCCCeEEEEEEEeec
Q 010856 476 FAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 476 p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
|.||+++.++.++++|||+++.
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~ 199 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRD 199 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEE
T ss_pred hheEEEcCCCCEEEcccccccc
Confidence 9999999999999999998764
No 246
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.66 E-value=1.9e-17 Score=158.76 Aligned_cols=135 Identities=19% Similarity=0.222 Sum_probs=107.3
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC--ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG--RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEE
Confidence 57899999999999999999964 699999999865542 22567889999999999999999999987633 44567
Q ss_pred ecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++.++....+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 151 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARL 151 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence 88887765443321 122344556899999998876 8999999999999999999998864
No 247
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.66 E-value=2.6e-17 Score=168.27 Aligned_cols=137 Identities=14% Similarity=0.173 Sum_probs=107.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||+||+|+. .+|+.||+|++.+.. ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~ 261 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLC 261 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEE
Confidence 36788899999999999999997 479999999997643 234567899999999999999999999887633 445
Q ss_pred eeecccCCCcc-ccccc--------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSASAS-ASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~~~-~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++++|+.|+.+ ..+.. .+.....++.||+.||+|||+ ++||.||+++.++.++++|||+++.+
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 67777765433 33221 112233446899999998876 89999999999999999999998643
No 248
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.66 E-value=1.7e-17 Score=158.85 Aligned_cols=139 Identities=20% Similarity=0.238 Sum_probs=106.5
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-----CccHHHHHHHHHHHhcCC---CCCccccceeEEcc
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-----GRAFESFDVECEMMKNIR---HRNLIKILHGVAVI 429 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~---H~niv~l~~~~~~~ 429 (499)
..++|...+.||+|+||+||+|+. .+++.||+|++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999995 579999999996432 122456788888887765 99999999998763
Q ss_pred cc---ceeeeeecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEE
Q 010856 430 TF---TVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVF 494 (499)
Q Consensus 430 ~~---~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~ 494 (499)
+. ....++++++.+++...+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||+
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 32 235567888888765554332 22344556899999999876 8999999999999999999998
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
+..
T Consensus 167 a~~ 169 (308)
T 3g33_A 167 ARI 169 (308)
T ss_dssp TTT
T ss_pred ccc
Confidence 764
No 249
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.66 E-value=1.7e-17 Score=161.46 Aligned_cols=139 Identities=19% Similarity=0.140 Sum_probs=107.1
Q ss_pred HHHhhhcccccccccCCcceEEEEEeC------CCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEcc
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARLG------DRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVI 429 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~ 429 (499)
....++|...+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 345678999999999999999999963 348899999976542 3356799999999999999999999998763
Q ss_pred ccceeeeeecccCC-Ccccccccc----------------------------ccccccccccccccceeecc------CC
Q 010856 430 TFTVCLCLFHHSSA-SASASLVSS----------------------------LTLSRPAKGGGFRGCVLWHV------GV 474 (499)
Q Consensus 430 ~~~~~~~l~~~~~~-~~~~~l~~~----------------------------~~~~~~~~~~i~~gl~yLH~------~~ 474 (499)
+ ..++++|++.+ ++.+.+... +.....++.|+++||+|||+ ++
T Consensus 123 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 123 K--PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred C--ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 3 34556777755 443333221 11123346899999999876 89
Q ss_pred CcccEEEeeCCCeEEEEEEEeec
Q 010856 475 DFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 475 ~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|.||+++.++.++++|||++..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~ 223 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRN 223 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHH
T ss_pred CcceEEECCCCeEEEeecCCCcc
Confidence 99999999999999999998753
No 250
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.66 E-value=1.6e-17 Score=171.15 Aligned_cols=139 Identities=19% Similarity=0.163 Sum_probs=110.0
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
+....++|.+.+.||+|+||.||+|...++..||||+++... ...++|.+|+++|++++|||||++++++.. + ..+
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~ 337 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIY 337 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cce
Confidence 344567799999999999999999998777889999997654 345789999999999999999999998865 2 344
Q ss_pred eeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++|++.+ ++.+.+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 57777755 44444432 122234556899999999876 89999999999999999999998653
No 251
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.66 E-value=3.2e-17 Score=154.58 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=108.1
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
.+.++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~ 83 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--R 83 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--E
Confidence 3567899999999999999999996 468899999996543 233567899999999999999999999987633 4
Q ss_pred eeeeecccCCCc-cccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSASA-SASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~~~-~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.+++++++.++. ...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEecccccc
Confidence 456777776543 333322 222334456899999999877 8999999999999999999998753
No 252
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.66 E-value=2.3e-17 Score=157.65 Aligned_cols=138 Identities=12% Similarity=0.157 Sum_probs=108.1
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC----CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC----GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46799999999999999999996 578999999997543 2345779999999999999999999999865444455
Q ss_pred eeeecccCCCccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 66788887764443322 112233446899999998866 8999999999999999999998764
No 253
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.66 E-value=1.9e-17 Score=162.61 Aligned_cols=135 Identities=19% Similarity=0.127 Sum_probs=98.9
Q ss_pred hcccccccccCCcceEEEEEeC--C--CCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 362 EFSENNLIGKGGFGSVYKARLG--D--RMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 362 ~~~~~~~lg~G~~g~v~~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.|...+.||+|+||.||+|+.. + +..||+|.++... ....+++.+|+.++++++||||+++++++...+...+ +
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~-l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-V 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE-E
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE-E
Confidence 4677789999999999999852 3 2468999987543 3446789999999999999999999998865443333 4
Q ss_pred eecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.+ ++.+.+... ......++.|+++||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccc
Confidence 6666654 554444321 11233445899999999876 8999999999999999999999864
No 254
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.66 E-value=2.6e-17 Score=160.10 Aligned_cols=135 Identities=15% Similarity=0.179 Sum_probs=107.3
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCC--ccHHHHHHHHHHHhcCCC--CCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCG--RAFESFDVECEMMKNIRH--RNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H--~niv~l~~~~~~~~~~~~~ 435 (499)
...|...+.||+|+||.||+|...+++.||+|++..... ...+.+.+|++++++++| |||+++++++...+ ..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEE
Confidence 356899999999999999999988899999999976542 234678999999999976 99999999987643 445
Q ss_pred eeecccCCCcccccccccc----ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLVSSLT----LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~~~~----~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|+.++++.+.+..... ....++.|++.||+|||+ ++||.||+++ ++.++++|||+++.
T Consensus 86 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 86 MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ 156 (343)
T ss_dssp EEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccc
Confidence 5677777776555543222 234456899999998876 8999999995 67899999998864
No 255
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.66 E-value=1.7e-17 Score=156.48 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=106.9
Q ss_pred HHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
...++|...+.||+|+||.||+|+..++..||+|++.... ...+.+.+|++++++++||||+++++++... ..+++
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v 85 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYII 85 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEE
Confidence 3456799999999999999999998888899999997544 3457899999999999999999999987542 23456
Q ss_pred ecccC-CCccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSS-ASASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~-~~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++. +++.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL 158 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence 77774 454443332 122234456899999998876 8999999999999999999998764
No 256
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.66 E-value=2.4e-17 Score=161.74 Aligned_cols=137 Identities=17% Similarity=0.144 Sum_probs=98.4
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHH-HhcCCCCCccccceeEEccccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEM-MKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~i-l~~l~H~niv~l~~~~~~~~~~~ 433 (499)
..++|...+.||+|+||+||+|+.+ +++.||+|++++.. ....+.+.+|..+ ++.++||||+++++++...+ .
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~ 113 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--K 113 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS--E
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--E
Confidence 3467999999999999999999964 68999999997654 2234567788877 57799999999999887643 4
Q ss_pred eeeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.++++||+.| ++...+... +...+.++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 4557777755 443333322 22334456899999998876 8999999999999999999999763
No 257
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.66 E-value=9.1e-18 Score=161.83 Aligned_cols=145 Identities=19% Similarity=0.188 Sum_probs=110.8
Q ss_pred cCHHHHHHHhhhcccccccccCCcceEEEEEeC------CCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccc
Q 010856 351 FSYLELFRATDEFSENNLIGKGGFGSVYKARLG------DRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKIL 423 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~ 423 (499)
+..+++....++|...+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455566788999999999999999999853 367899999975542 3356789999999999999999999
Q ss_pred eeEEccccceeeeeecccCC-Cccccccc--------------cccccccccccccccceeecc------CCCcccEEEe
Q 010856 424 HGVAVITFTVCLCLFHHSSA-SASASLVS--------------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 424 ~~~~~~~~~~~~~l~~~~~~-~~~~~l~~--------------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
+++...+ ..+++++++.+ ++.+.+.. .......++.|++.||+|||+ +++|.||+++
T Consensus 95 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 95 GVVSQGQ--PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 172 (322)
T ss_dssp EEECSSS--SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC
T ss_pred EEEccCC--ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc
Confidence 9986633 34556777755 54443332 112233446899999998876 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||+++.
T Consensus 173 ~~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRD 187 (322)
T ss_dssp TTCCEEECCTTCCCG
T ss_pred CCCeEEECcCccccc
Confidence 999999999998763
No 258
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.66 E-value=1.7e-17 Score=167.39 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=100.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++...+ ..
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~ 223 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RL 223 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT--EE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EE
Confidence 346799999999999999999996 579999999997542 233466889999999999999999999987643 45
Q ss_pred eeeecccCCCcc-ccccc----cccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASAS-ASLVS----SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~-~~l~~----~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++||+.|+.+ ..+.. .......++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 567888866543 33322 222344456899999999885 7999999999999999999998764
No 259
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.66 E-value=3.1e-17 Score=157.72 Aligned_cols=139 Identities=14% Similarity=0.014 Sum_probs=106.6
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcc--ccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVI--TFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~--~~~~~~ 435 (499)
..++|...+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++... .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999999996 57999999999765555567899999999999999999999998642 122445
Q ss_pred eeecccCC-Cccccccc--------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++++.+ ++.+.+.. .+.....++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 56777755 44333322 122234456899999998876 8999999999999999999997653
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.66 E-value=1.6e-17 Score=166.03 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=101.9
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcc----ccceee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVI----TFTVCL 435 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~----~~~~~~ 435 (499)
..|...+.||+|+||+||+|+. .+|+.||||++.... +...+|++++++++|||||++++++... +.....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4588999999999999999997 469999999996543 2234799999999999999999988542 122345
Q ss_pred eeecccCCCccccccc--------cccccccccccccccceeecc------CCCcccEEEeeCCC-eEEEEEEEeecc
Q 010856 436 CLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG-VEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~-~~~~~f~~~~~~ 498 (499)
++++|+.+++...+.. .+.....++.|+++||+|||+ ++||.||+++.+++ ++++|||+++.+
T Consensus 130 lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 6788888765443321 112234456899999999876 89999999986654 699999998753
No 261
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.66 E-value=4e-17 Score=157.86 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=106.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.. ..+.+.+|++++++++ ||||+++++++........+++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36799999999999999999995 57899999999743 3577999999999997 9999999999876444445567
Q ss_pred ecccCCCccccccc--cccccccccccccccceeecc------CCCcccEEEeeCC-CeEEEEEEEeec
Q 010856 438 FHHSSASASASLVS--SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP-GVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~~l~~--~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~-~~~~~~f~~~~~ 497 (499)
++++.++.+..+.. .......++.|++.||+|||+ +++|.||+++.++ .++++|||++..
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 78876654443322 222344556899999998876 8999999998766 799999999864
No 262
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.66 E-value=3.3e-17 Score=162.13 Aligned_cols=134 Identities=14% Similarity=0.175 Sum_probs=106.1
Q ss_pred hhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCC--CCCccccceeEEccccceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIR--HRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~--H~niv~l~~~~~~~~~~~~~~ 436 (499)
..|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+ ..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEE
Confidence 4599999999999999999998779999999997654 234577999999999996 599999999887744 3455
Q ss_pred eecccCCCcccccccccc----ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVSSLT----LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~~~----~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|+.++++.+.+..... ....++.||+.||+|||+ ++||.||++ +++.++++|||+++.
T Consensus 134 v~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll-~~~~~kl~DFG~a~~ 203 (390)
T 2zmd_A 134 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQ 203 (390)
T ss_dssp EEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE-SSSCEEECCCSSSCC
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE-ECCeEEEEecCcccc
Confidence 677776666554433222 234456899999999876 899999999 568999999999864
No 263
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.65 E-value=3.4e-17 Score=154.63 Aligned_cols=136 Identities=14% Similarity=0.098 Sum_probs=98.9
Q ss_pred HhhhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
..++|...+.||+|+||.||+|+.. .+..||+|.+.... ....+.+.+|+.++++++||||+++++++.. . .
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~-~ 89 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--N-P 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--S-S
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc--C-c
Confidence 3467999999999999999999963 24579999987543 2345679999999999999999999998743 2 2
Q ss_pred eeeeecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.+++++++.+ ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence 3456677655 44333321 122233446899999998876 8999999999999999999998864
No 264
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.65 E-value=1.6e-16 Score=138.75 Aligned_cols=134 Identities=20% Similarity=0.180 Sum_probs=87.1
Q ss_pred ccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCce
Q 010856 123 FSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEY 202 (499)
Q Consensus 123 ~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 202 (499)
+..+.+|+.|++++|+++.++......++|++|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCCcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 3445556666666666665543222223666666666666654 45666777777777777777655555577777777
Q ss_pred eeCcCCcCCCCCCc--cccCCCCCCEEeCCCCcCCccCcc---cccCCCCCCEEEccCCcCc
Q 010856 203 LFLGYNRLQGSIPD--SFGDLISLKFLNLSNNNLSGAIPA---SLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 203 L~L~~n~l~~~~~~--~l~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~ 259 (499)
|++++|+++. .|. .+..+++|+.|++++|+++...+. .+..+++|+.||+++|.+.
T Consensus 93 L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777763 333 677777888888888877743322 3777788888888877765
No 265
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.65 E-value=6.5e-17 Score=155.40 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=104.8
Q ss_pred hhcccc-cccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeeee
Q 010856 361 DEFSEN-NLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 361 ~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~l 437 (499)
+.|.+. +.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++...+ ..+++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEE
Confidence 457764 7899999999999995 57999999999876655677899999999884 7999999999987633 45567
Q ss_pred ecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCC---eEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG---VEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~---~~~~~f~~~~~ 497 (499)
+|++.| .+.+.+... ......++.|++.||+|||+ +++|.||+++.++. ++++|||++..
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 777754 444433322 22334456899999999876 89999999987766 99999998753
No 266
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.65 E-value=6.1e-17 Score=161.78 Aligned_cols=137 Identities=14% Similarity=0.120 Sum_probs=103.3
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--------ccHHHHHHHHHHHhcCCCCCccccceeEEc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--------RAFESFDVECEMMKNIRHRNLIKILHGVAV 428 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~H~niv~l~~~~~~ 428 (499)
...++|...+.||+|+||+||+|+. .+++.||+|++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3456799999999999999999996 5689999999975431 112358899999999999999999998754
Q ss_pred cccceeeeeecccCC-Cccccccccc----cccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEE
Q 010856 429 ITFTVCLCLFHHSSA-SASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVF 494 (499)
Q Consensus 429 ~~~~~~~~l~~~~~~-~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~ 494 (499)
.+ .++++|++.+ ++.+.+.... .....++.|++.||+|||+ ++||.||++..++ .++++|||+
T Consensus 212 ~~---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 ED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SE---EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred Cc---eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 32 3456777754 5444443322 2234446899999999876 8999999997654 499999998
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
++.
T Consensus 289 a~~ 291 (419)
T 3i6u_A 289 SKI 291 (419)
T ss_dssp TTS
T ss_pred cee
Confidence 764
No 267
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.65 E-value=2.8e-17 Score=158.08 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=103.0
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcc----------
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVI---------- 429 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~---------- 429 (499)
++|...+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57899999999999999999974 5899999999866555567899999999999999999999987431
Q ss_pred --ccceeeeeecccCCCccccccc---cccccccccccccccceeecc------CCCcccEEEee-CCCeEEEEEEEeec
Q 010856 430 --TFTVCLCLFHHSSASASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL-EPGVEVICFVFEIL 497 (499)
Q Consensus 430 --~~~~~~~l~~~~~~~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~-~~~~~~~~f~~~~~ 497 (499)
+....+++++++.|++.+.+.. .......++.|++.||+|||+ +++|.||+++. ++.++++|||+++.
T Consensus 91 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred ccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 2234566788888765544432 122234456899999999876 89999999974 55889999998864
No 268
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.65 E-value=3.6e-17 Score=159.44 Aligned_cols=135 Identities=14% Similarity=0.179 Sum_probs=96.7
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..+.|...+.||+|+||.||+|+.. +++.||+|+++... ..+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEE
Confidence 3467999999999999999999974 68899999997543 3456889999999999999999999987633 44557
Q ss_pred ecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~ 497 (499)
+|++.| .+.+.+... +.....++.|++.||+|||+ +++|.||++.. ++.++++|||++..
T Consensus 127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 777754 443433322 22334456899999999876 89999999975 77899999999864
No 269
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.65 E-value=3e-17 Score=156.28 Aligned_cols=135 Identities=18% Similarity=0.144 Sum_probs=102.2
Q ss_pred hcccccccccCCcceEEEEEe-CC---CCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 362 EFSENNLIGKGGFGSVYKARL-GD---RMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 362 ~~~~~~~lg~G~~g~v~~~~~-~~---~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.|...+.||+|+||+||+|+. .+ +..||+|.+..... ...+.+.+|++++++++||||+++++++...+...++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~- 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV- 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE-
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE-
Confidence 355668999999999999984 23 33799999975442 3457899999999999999999999998765544444
Q ss_pred eeccc-CCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHS-SASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~-~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++ ++++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 45555 55554444321 12233445799999998876 8999999999999999999998863
No 270
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.65 E-value=3.5e-17 Score=158.40 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=107.9
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCc--cHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGR--AFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 100 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK--KRWY 100 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC--CEEE
Confidence 3467999999999999999999964 6999999999665422 245688999999999999999999998763 3455
Q ss_pred eeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++++.++....+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence 6788887775554321 122344556899999998876 8999999999999999999998754
No 271
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.65 E-value=2.3e-17 Score=159.26 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=101.2
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCE----EEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRME----VAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
++|...+.||+|+||+||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.. ...+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CccE
Confidence 5688999999999999999995 35554 7777775433 2334567899999999999999999998854 2233
Q ss_pred eeeeccc-CCCcccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 435 LCLFHHS-SASASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 435 ~~l~~~~-~~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.+++++ +|++.+.+... +.....++.|++.||+|||+ ++||.||+++.++.++++|||+++..
T Consensus 91 -~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 91 -LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp -EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred -EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 455555 45554444321 22234446899999999876 89999999999999999999998653
No 272
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.65 E-value=3.8e-17 Score=156.84 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=102.0
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcc
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVI 429 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~ 429 (499)
+....++|...+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3345577899999999999999999852 35589999997553 23356799999999999999999999998764
Q ss_pred ccc---eeeeeecccCC-Ccccccc----------ccccccccccccccccceeecc------CCCcccEEEeeCCCeEE
Q 010856 430 TFT---VCLCLFHHSSA-SASASLV----------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEV 489 (499)
Q Consensus 430 ~~~---~~~~l~~~~~~-~~~~~l~----------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~ 489 (499)
+.. ..+++++++.+ ++...+. ..+.....++.|+++||+|||+ +++|.||+++.++.+++
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 322 23456677655 4433331 1122234456899999999877 89999999999999999
Q ss_pred EEEEEeec
Q 010856 490 ICFVFEIL 497 (499)
Q Consensus 490 ~~f~~~~~ 497 (499)
+|||++..
T Consensus 189 ~Dfg~~~~ 196 (313)
T 3brb_A 189 ADFGLSKK 196 (313)
T ss_dssp CSCSCC--
T ss_pred eecCccee
Confidence 99998764
No 273
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.65 E-value=8.8e-17 Score=153.27 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=102.2
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhc--CCCCCccccceeEEcc--ccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKN--IRHRNLIKILHGVAVI--TFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~H~niv~l~~~~~~~--~~~~~~ 435 (499)
.++|...+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... .....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999988 7889999999653 34556677777665 8999999999987652 123345
Q ss_pred eeecccCC-Cccccccc---cccccccccccccccceeec--------c------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVS---SLTLSRPAKGGGFRGCVLWH--------V------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~---~~~~~~~~~~~i~~gl~yLH--------~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.+ ++.+.+.. .+.....++.|++.||+||| + ++||.||+++.++.++++|||+++.
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 67777765 44333321 22233445689999999998 4 8999999999999999999998764
No 274
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.65 E-value=1.9e-17 Score=160.24 Aligned_cols=133 Identities=14% Similarity=0.078 Sum_probs=104.8
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+ ..++++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEE
Confidence 5799999999999999999995 5799999999975432 34688999999999 9999999999887633 445677
Q ss_pred cccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCC-----eEEEEEEEeec
Q 010856 439 HHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG-----VEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~-----~~~~~f~~~~~ 497 (499)
+++++++.+.+.. .+.....++.|++.||+|||+ ++||.||+++.++. ++++|||+++.
T Consensus 85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 7776665544432 222344556899999998876 89999999988776 99999999874
No 275
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.65 E-value=6.6e-17 Score=154.27 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=96.7
Q ss_pred hhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhc--CCCCCccccceeEEcccc--ceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKN--IRHRNLIKILHGVAVITF--TVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~H~niv~l~~~~~~~~~--~~~~~ 436 (499)
++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++...+. ...++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5789999999999999999987 4889999998643 34667889999887 799999999999876432 24456
Q ss_pred eecccCC-Ccccccc---ccccccccccccccccceeec--------c------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLV---SSLTLSRPAKGGGFRGCVLWH--------V------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~---~~~~~~~~~~~~i~~gl~yLH--------~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++.+ ++.+.+. ..+.....++.|++.||+||| + ++||.||+++.++.++++|||+++.
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 7777765 4444332 122334455789999999998 4 7999999999999999999999854
No 276
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.65 E-value=8.2e-17 Score=154.26 Aligned_cols=137 Identities=18% Similarity=0.119 Sum_probs=102.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 107 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--EL 107 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cE
Confidence 446799999999999999999996 579999999997543 233567899999999999999999999987633 44
Q ss_pred eeeecccCCC-ccccccc--------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSAS-ASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~-~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++++.++ +.+.+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence 5677777664 3333221 122233456899999999876 8999999999999999999998764
No 277
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.65 E-value=2.8e-17 Score=160.53 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=109.3
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcCCCCCccccceeEEccc---ccee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNIRHRNLIKILHGVAVIT---FTVC 434 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~---~~~~ 434 (499)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46799999999999999999996 4789999999975432 33567889999999999999999999875421 2345
Q ss_pred eeeecccCCCccccccc---cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASASLVS---SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 66888888776544332 222344556899999998876 8999999999999999999998864
No 278
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.65 E-value=1.3e-16 Score=139.37 Aligned_cols=109 Identities=20% Similarity=0.198 Sum_probs=51.7
Q ss_pred ccCCCCCCEEeccCCcCCccCCccccCCC-CCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccC
Q 010856 51 ISNLTNSTIVNLGGNKLNGSIPITLSKLQ-KLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSL 129 (499)
Q Consensus 51 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 129 (499)
+.++++|++|++++|.++.. +. +..+. +|+.|++++|.+++. ..+..+++|++|++++|++++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 44445555555555555532 22 22222 555555555555433 344455555555555555554433333445555
Q ss_pred CeeeccccCCCCCCc--cccCCCCCcEEEcCCCcCC
Q 010856 130 RIVSLGSNKLTSVPL--TFWNLKDILNLNFSSNFLT 163 (499)
Q Consensus 130 ~~L~L~~n~l~~~~~--~~~~l~~L~~L~l~~n~l~ 163 (499)
+.|++++|+++.+|. .+..+++|+.|++++|.++
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 555555555544443 3444444444444444443
No 279
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.65 E-value=1.6e-16 Score=149.50 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=108.2
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++... ...++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--NIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--CEEEE
Confidence 3467999999999999999999964 78999999997654 34457899999999999999999999988763 24455
Q ss_pred eecccCC-Cccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.+ ++.+.+.... .....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 6777755 4444443221 2234456899999998866 8999999999999999999998754
No 280
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.65 E-value=1.8e-17 Score=159.24 Aligned_cols=147 Identities=16% Similarity=0.131 Sum_probs=111.2
Q ss_pred ccCHHHHHHHhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcC-CCCCccc
Q 010856 350 TFSYLELFRATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNI-RHRNLIK 421 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~H~niv~ 421 (499)
.+....+....++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345556666678999999999999999999983 3568999999976542 3356789999999999 7999999
Q ss_pred cceeEEccccceeeeeecccCC-Ccccccccc--------------------ccccccccccccccceeecc------CC
Q 010856 422 ILHGVAVITFTVCLCLFHHSSA-SASASLVSS--------------------LTLSRPAKGGGFRGCVLWHV------GV 474 (499)
Q Consensus 422 l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~--------------------~~~~~~~~~~i~~gl~yLH~------~~ 474 (499)
+++++...+. ..+++++++.+ ++.+.+... ......++.|++.||+|||+ ++
T Consensus 96 ~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~di 174 (316)
T 2xir_A 96 LLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174 (316)
T ss_dssp EEEEECCTTS-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred EEEEEecCCC-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccC
Confidence 9999876433 24456677654 443333221 11223345799999998877 89
Q ss_pred CcccEEEeeCCCeEEEEEEEeec
Q 010856 475 DFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 475 ~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|.||+++.++.++++|||+++.
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~ 197 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARD 197 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSC
T ss_pred ccceEEECCCCCEEECCCccccc
Confidence 99999999999999999998764
No 281
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.65 E-value=3.3e-17 Score=158.77 Aligned_cols=137 Identities=19% Similarity=0.204 Sum_probs=104.2
Q ss_pred HhhhcccccccccCCcceEEEEEe--------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcC-CCCCccccceeEEc
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL--------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNI-RHRNLIKILHGVAV 428 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~ 428 (499)
..++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 347899999999999999999985 246789999997654 23456789999999999 99999999999876
Q ss_pred cccceeeeeecccCC-Cccccccccc--------------------cccccccccccccceeecc------CCCcccEEE
Q 010856 429 ITFTVCLCLFHHSSA-SASASLVSSL--------------------TLSRPAKGGGFRGCVLWHV------GVDFAAFVF 481 (499)
Q Consensus 429 ~~~~~~~~l~~~~~~-~~~~~l~~~~--------------------~~~~~~~~~i~~gl~yLH~------~~~p~~~l~ 481 (499)
.+ ..+++++++.+ ++.+.+.... .....++.|++.||+|||+ +++|.||++
T Consensus 113 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 113 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp SS--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CC--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 33 34556777755 4433332211 1123345799999998876 899999999
Q ss_pred eeCCCeEEEEEEEeec
Q 010856 482 VLEPGVEVICFVFEIL 497 (499)
Q Consensus 482 ~~~~~~~~~~f~~~~~ 497 (499)
+.++.++++|||+++.
T Consensus 191 ~~~~~~kL~Dfg~~~~ 206 (334)
T 2pvf_A 191 TENNVMKIADFGLARD 206 (334)
T ss_dssp CTTCCEEECCCTTCEE
T ss_pred cCCCCEEEcccccccc
Confidence 9999999999998764
No 282
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.65 E-value=3e-17 Score=161.49 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=108.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--ccHHHHHHHHHHHhcCCCCCccccceeEEccccc----
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--RAFESFDVECEMMKNIRHRNLIKILHGVAVITFT---- 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~---- 432 (499)
.+.|...+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46789999999999999999996 4799999999976432 2356789999999999999999999998764322
Q ss_pred eeeeeecccCCCccccccc--cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVS--SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~--~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++.+++...+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 2356788888776544332 223344556899999999876 8999999999999999999998864
No 283
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.65 E-value=5.5e-17 Score=152.87 Aligned_cols=137 Identities=16% Similarity=0.283 Sum_probs=107.7
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 86 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YV 86 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eE
Confidence 456799999999999999999996 579999999997543 233577999999999999999999999987633 44
Q ss_pred eeeecccCCCccc-cccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASA-SLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~-~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.++.+. .+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 161 (278)
T 3cok_A 87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ 161 (278)
T ss_dssp EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence 5677777554333 2221 122334456899999998876 8999999999999999999998764
No 284
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.65 E-value=4.3e-17 Score=157.46 Aligned_cols=137 Identities=18% Similarity=0.134 Sum_probs=101.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCE----EEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRME----VAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
.++|...+.||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS--E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC--c
Confidence 35799999999999999999995 45554 4677665433 345678999999999999999999999988643 3
Q ss_pred eeeeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 434 CLCLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 434 ~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++++++.+|++.+.+.. .......++.|++.||+|||+ ++||.||+++.++.++++|||++...
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 444445555555544432 122234456899999998876 89999999999999999999998653
No 285
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.64 E-value=1.6e-17 Score=157.35 Aligned_cols=137 Identities=18% Similarity=0.153 Sum_probs=107.5
Q ss_pred HHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
....+|+..+.||+|+||.||+|+.. ++..||+|.+.... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 86 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYI 86 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEE
Confidence 45678999999999999999999964 58899999997543 34678999999999999999999999886533 3455
Q ss_pred eecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 7777764 44333321 112233445799999998876 8999999999999999999998764
No 286
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.64 E-value=5.6e-17 Score=154.77 Aligned_cols=135 Identities=17% Similarity=0.231 Sum_probs=105.8
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..+.|...+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEE
Confidence 3467999999999999999999974 68999999997666566788999999999999999999999987633 44567
Q ss_pred ecccCCCcccccc------ccccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 438 FHHSSASASASLV------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 438 ~~~~~~~~~~~l~------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
++++.++....+. ........++.|++.||+|||+ +++|.||+++.++.++++|||++
T Consensus 95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 7887665443321 1222334456899999998876 89999999999999999999975
No 287
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.64 E-value=4.6e-17 Score=170.19 Aligned_cols=134 Identities=14% Similarity=0.175 Sum_probs=103.0
Q ss_pred hccccc-ccccCCcceEEEEEeC---CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 362 EFSENN-LIGKGGFGSVYKARLG---DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 362 ~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
++.... .||+|+||.||+|.++ ++..||||+++... ....++|.+|++++++++|||||++++++.. + ..++
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~--~~~l 412 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALML 412 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S--SEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C--CeEE
Confidence 344444 7999999999999853 46679999997654 3456889999999999999999999999865 2 2445
Q ss_pred eecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 437 LFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 437 l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++|++.++ +.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.+
T Consensus 413 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 67777554 4333321 122344556899999999876 89999999999999999999998653
No 288
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.64 E-value=8.8e-17 Score=154.87 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=106.6
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC------ccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG------RAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.+.|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 467999999999999999999964 699999999976532 13577999999999999999999999987633
Q ss_pred eeeeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC----CeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP----GVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~----~~~~~~f~~~~~ 497 (499)
..++++|++.| ++.+.+... ......++.|++.||+|||+ +++|.||++++++ .++++|||++..
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 44567777754 444433322 22334556899999998866 8999999998877 799999998764
No 289
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.64 E-value=4e-17 Score=160.24 Aligned_cols=135 Identities=14% Similarity=0.123 Sum_probs=103.6
Q ss_pred HHhhhcccccccccCCcceEEEEE------eCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC---CCCccccceeEEc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKAR------LGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR---HRNLIKILHGVAV 428 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---H~niv~l~~~~~~ 428 (499)
...++|...+.||+|+||+||+|. ..+++.||+|+++.. ...++.+|++++.+++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345679999999999999999994 356889999999753 3467888888888876 9999999999876
Q ss_pred cccceeeeeecccC-CCccccccc---------cccccccccccccccceeecc------CCCcccEEEee---------
Q 010856 429 ITFTVCLCLFHHSS-ASASASLVS---------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL--------- 483 (499)
Q Consensus 429 ~~~~~~~~l~~~~~-~~~~~~l~~---------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~--------- 483 (499)
.+ ..++++||+. |++.+.+.. .+.....++.|+++||+|||+ ++||.||+++.
T Consensus 139 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 139 QN--GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SS--CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred CC--CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence 44 3345677775 444444431 122244556899999998877 89999999988
Q ss_pred --CCCeEEEEEEEeec
Q 010856 484 --EPGVEVICFVFEIL 497 (499)
Q Consensus 484 --~~~~~~~~f~~~~~ 497 (499)
++.++++|||+++.
T Consensus 217 ~~~~~~kl~DFG~a~~ 232 (365)
T 3e7e_A 217 DLSAGLALIDLGQSID 232 (365)
T ss_dssp --CTTEEECCCTTCEE
T ss_pred cccCCEEEeeCchhhh
Confidence 89999999999864
No 290
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.64 E-value=5.4e-17 Score=151.92 Aligned_cols=135 Identities=16% Similarity=0.083 Sum_probs=107.3
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeec
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFH 439 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~ 439 (499)
.++|...+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++...+ ..+++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEe
Confidence 467899999999999999999988888999999976542 3478999999999999999999999887633 3456777
Q ss_pred ccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 440 HSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 440 ~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++.+ .+.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccc
Confidence 7755 443333221 22233446899999998876 8999999999999999999998754
No 291
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.64 E-value=6.7e-17 Score=152.36 Aligned_cols=139 Identities=12% Similarity=0.130 Sum_probs=108.5
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..++|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 356899999999999999999996 479999999997654 23456799999999999999999999988654444556
Q ss_pred eeecccCC-Cccccccc--------cccccccccccccccceeec-----------cCCCcccEEEeeCCCeEEEEEEEe
Q 010856 436 CLFHHSSA-SASASLVS--------SLTLSRPAKGGGFRGCVLWH-----------VGVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH-----------~~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
+++|++.+ ++.+.+.. .+.....++.|++.||+||| .+++|.||+++.++.++++|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 67888865 44333321 22233445688999998765 478999999999999999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 164 ~~ 165 (279)
T 2w5a_A 164 RI 165 (279)
T ss_dssp HH
T ss_pred ee
Confidence 54
No 292
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.64 E-value=6.4e-17 Score=156.83 Aligned_cols=136 Identities=13% Similarity=0.174 Sum_probs=107.8
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 117 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVF 117 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEE
Confidence 467999999999999999999964 68899999997653 234567899999999999999999999987633 455
Q ss_pred eeecccCCCccccc-cc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASL-VS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l-~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.++.+..+ .. .+.....++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 190 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 190 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCcee
Confidence 67888865543332 21 222344456899999998876 8999999999999999999998764
No 293
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.64 E-value=2.2e-17 Score=161.85 Aligned_cols=147 Identities=16% Similarity=0.156 Sum_probs=113.5
Q ss_pred ccccCHHHHHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-----CCCccc
Q 010856 348 WRTFSYLELFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-----HRNLIK 421 (499)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----H~niv~ 421 (499)
...+++++.....++|...+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|+++++.+. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34455555556678899999999999999999996 578999999997432 33466788999999886 999999
Q ss_pred cceeEEccccceeeeeecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEEee------
Q 010856 422 ILHGVAVITFTVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL------ 483 (499)
Q Consensus 422 l~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~------ 483 (499)
+++++...+ ..+++++++++++.+.+... ......++.|++.||+|||+ ++||.||+++.
T Consensus 101 ~~~~~~~~~--~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 101 YHGKFMYYD--HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEEEETT--EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred ccceeeECC--eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence 999987743 45567788877665554322 12234456899999998876 89999999964
Q ss_pred -------------------CCCeEEEEEEEeec
Q 010856 484 -------------------EPGVEVICFVFEIL 497 (499)
Q Consensus 484 -------------------~~~~~~~~f~~~~~ 497 (499)
++.++++|||++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~ 211 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF 211 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred ccchhcccccccccccccCCCCEEEEeccCcee
Confidence 78999999999864
No 294
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.64 E-value=4.3e-17 Score=155.23 Aligned_cols=136 Identities=18% Similarity=0.111 Sum_probs=102.8
Q ss_pred hhcccccccccCCcceEEEEEeCC----CCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLGD----RMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..|...+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||+++++++...+...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~- 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL- 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE-
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE-
Confidence 458888999999999999998532 3368999987544 2345779999999999999999999998766443333
Q ss_pred eeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++++.+ ++.+.+... ......++.|++.||+|||+ +++|.||++++++.++++|||++..
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccc
Confidence 46677655 444333221 12233445799999998876 8999999999999999999998864
No 295
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.64 E-value=6.6e-17 Score=153.66 Aligned_cols=136 Identities=13% Similarity=0.173 Sum_probs=107.5
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~ 91 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVF 91 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEE
Confidence 467899999999999999999964 68899999997653 234567899999999999999999999987633 445
Q ss_pred eeecccCCCcccccc-c----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLV-S----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~-~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.++....+. . .+.....++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 164 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 164 (294)
T ss_dssp EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCcee
Confidence 677888655433322 1 222334456899999998876 8999999999999999999998764
No 296
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.64 E-value=3.7e-17 Score=158.50 Aligned_cols=138 Identities=16% Similarity=0.135 Sum_probs=109.3
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CCCccccceeEEc------ccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HRNLIKILHGVAV------ITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~------~~~ 431 (499)
..+|...+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.+++++. ||||+++++++.. .+.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 45799999999999999999996 478999999997665555678999999999996 9999999998853 122
Q ss_pred ceeeeeecccCCCccccccc-------cccccccccccccccceeecc--------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 432 TVCLCLFHHSSASASASLVS-------SLTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 432 ~~~~~l~~~~~~~~~~~l~~-------~~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
...+++++++.|++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++.
T Consensus 107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 34567888888876554432 222334456889999987765 679999999999999999999876
Q ss_pred c
Q 010856 497 L 497 (499)
Q Consensus 497 ~ 497 (499)
.
T Consensus 187 ~ 187 (337)
T 3ll6_A 187 T 187 (337)
T ss_dssp C
T ss_pred e
Confidence 4
No 297
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.64 E-value=4e-17 Score=158.12 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=106.2
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--------ccHHHHHHHHHHHhcCCCCCccccceeEEcc
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--------RAFESFDVECEMMKNIRHRNLIKILHGVAVI 429 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~ 429 (499)
..++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456799999999999999999995 5789999999976531 1234678899999999999999999998763
Q ss_pred ccceeeeeeccc-CC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 430 TFTVCLCLFHHS-SA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 430 ~~~~~~~l~~~~-~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+ ..+++++++ .| ++...+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 102 ~--~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 102 G--FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp S--EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred C--EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 3 344566655 44 333333222 22334456899999998876 8999999999999999999998864
Q ss_pred c
Q 010856 498 L 498 (499)
Q Consensus 498 ~ 498 (499)
.
T Consensus 180 ~ 180 (335)
T 3dls_A 180 L 180 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 298
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.64 E-value=3e-17 Score=157.44 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=106.5
Q ss_pred HHhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccCC-ccHHHHHHHHHHHhcC-CCCCccccceeEEcc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQCG-RAFESFDVECEMMKNI-RHRNLIKILHGVAVI 429 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~ 429 (499)
...++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3446799999999999999999984 3578999999976542 3457799999999999 999999999998763
Q ss_pred ccceeeeeecccCC-Ccccccccc----------------------ccccccccccccccceeecc------CCCcccEE
Q 010856 430 TFTVCLCLFHHSSA-SASASLVSS----------------------LTLSRPAKGGGFRGCVLWHV------GVDFAAFV 480 (499)
Q Consensus 430 ~~~~~~~l~~~~~~-~~~~~l~~~----------------------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l 480 (499)
+ ..++++|++.+ ++.+.+... +.....++.|+++||+|||+ +++|.||+
T Consensus 100 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 100 G--PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177 (313)
T ss_dssp S--SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred C--CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence 3 34556777755 444333221 12233445899999999876 89999999
Q ss_pred EeeCCCeEEEEEEEeec
Q 010856 481 FVLEPGVEVICFVFEIL 497 (499)
Q Consensus 481 ~~~~~~~~~~~f~~~~~ 497 (499)
++.++.++++|||++..
T Consensus 178 ~~~~~~~kl~Dfg~~~~ 194 (313)
T 1t46_A 178 LTHGRITKICDFGLARD 194 (313)
T ss_dssp EETTTEEEECCCGGGSC
T ss_pred EcCCCCEEEcccccccc
Confidence 99999999999998764
No 299
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.64 E-value=3.5e-17 Score=159.32 Aligned_cols=139 Identities=17% Similarity=0.187 Sum_probs=105.0
Q ss_pred HHHhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcC-CCCCccccceeEEc
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNI-RHRNLIKILHGVAV 428 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~ 428 (499)
....++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34557899999999999999999995 245689999997543 33457899999999999 99999999999876
Q ss_pred cccceeeeeecccCC-Ccccccccc---------------------------ccccccccccccccceeecc------CC
Q 010856 429 ITFTVCLCLFHHSSA-SASASLVSS---------------------------LTLSRPAKGGGFRGCVLWHV------GV 474 (499)
Q Consensus 429 ~~~~~~~~l~~~~~~-~~~~~l~~~---------------------------~~~~~~~~~~i~~gl~yLH~------~~ 474 (499)
.+ ..+++++++.+ ++.+.+... +.....++.|++.||+|||+ ++
T Consensus 121 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di 198 (344)
T 1rjb_A 121 SG--PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198 (344)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred CC--ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 33 34556777754 544433221 11223346899999998876 89
Q ss_pred CcccEEEeeCCCeEEEEEEEeec
Q 010856 475 DFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 475 ~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+|.||+++.++.++++|||++..
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~ 221 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARD 221 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSC
T ss_pred ChhhEEEcCCCcEEeCCCccCcc
Confidence 99999999999999999998764
No 300
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.64 E-value=4.4e-17 Score=152.80 Aligned_cols=136 Identities=14% Similarity=0.157 Sum_probs=106.9
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|...+.||+|+||.||+|+. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+....+++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 45789999999999999999998 48899999997654 2335679999999999999999999999877533445567
Q ss_pred ecccCC-Ccccccccc------ccccccccccccccceeecc--------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 438 FHHSSA-SASASLVSS------LTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
++++.+ ++.+.+... +.....++.|+++||+|||+ +++|.||+++.++.++++||||..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence 777765 554444332 22234456899999998886 579999999989999999998864
No 301
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.64 E-value=5.4e-17 Score=158.56 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=109.3
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--ccHHHHHHHHHHHhcCCCCCccccceeEEcccc----c
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--RAFESFDVECEMMKNIRHRNLIKILHGVAVITF----T 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~----~ 432 (499)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35789999999999999999996 4799999999975432 235678999999999999999999999876432 2
Q ss_pred eeeeeecccCCCccccccc--cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVS--SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~--~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++.+++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 3456788888776554432 222344556899999999876 8999999999999999999998753
No 302
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.64 E-value=5e-17 Score=155.47 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=101.2
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|...+.||+|+||.||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++... . ..++
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~-~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD--N-LAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--S-CEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC--c-EEEE
Confidence 467889999999999999999863 368999887543 23356799999999999999999999976542 2 3346
Q ss_pred ecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++.| .+.+.+.. .......++.|++.||+|||+ +++|.||++++++.++++|||+++.
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~ 181 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred EecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence 666654 44333321 112234456899999999876 8999999999999999999998764
No 303
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.64 E-value=5.8e-17 Score=152.72 Aligned_cols=135 Identities=19% Similarity=0.108 Sum_probs=102.7
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
..++|+..+.||+|+||.||+|+. +|+.||+|+++... ..+.+.+|++++++++||||+++++++...+. ..++++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEE
Confidence 356799999999999999999987 57899999997543 45789999999999999999999998765332 344567
Q ss_pred cccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++.+ ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccc
Confidence 77765 44443332 122234556899999998876 8999999999999999999998753
No 304
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.64 E-value=9.1e-17 Score=157.38 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=106.6
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEE
Confidence 367999999999999999999964 78999999997653 233567999999999999999999999887633 45567
Q ss_pred ecccCC-Ccccccccc----ccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEee
Q 010856 438 FHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
++++.| ++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++.
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 180 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 180 (360)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCc
Confidence 888865 443333322 22234456888999888764 789999999999999999999874
No 305
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.64 E-value=1.2e-16 Score=151.88 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=101.1
Q ss_pred cccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeeccc
Q 010856 363 FSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFHHS 441 (499)
Q Consensus 363 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~~~ 441 (499)
|.....||+|+||.||+|+. .+++.||+|.+........+.+.+|+++++.++||||+++++++...+ ...++++++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 44456899999999999995 578999999998766555678999999999999999999999987633 445567777
Q ss_pred CCC-cccccccc-------ccccccccccccccceeecc------CCCcccEEEee-CCCeEEEEEEEeec
Q 010856 442 SAS-ASASLVSS-------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL-EPGVEVICFVFEIL 497 (499)
Q Consensus 442 ~~~-~~~~l~~~-------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~-~~~~~~~~f~~~~~ 497 (499)
.++ +.+.+... +.....++.|++.||+|||+ +++|.||+++. ++.++++|||++..
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~ 172 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccc
Confidence 544 33333221 11223345799999998876 89999999987 78999999998764
No 306
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.64 E-value=4.3e-17 Score=155.33 Aligned_cols=136 Identities=21% Similarity=0.260 Sum_probs=105.6
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 79 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYL 79 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEE
Confidence 357899999999999999999964 78999999986543 233467899999999999999999999987633 4556
Q ss_pred eecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.+++.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 80 v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 80 VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp EEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred EEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence 7888877655444322 12233456899999999876 8999999999999999999998653
No 307
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.64 E-value=5.4e-17 Score=158.03 Aligned_cols=138 Identities=12% Similarity=0.072 Sum_probs=107.7
Q ss_pred HHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcC-CCCCccccceeEEccccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFT 432 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~ 432 (499)
...++|...+.||+|+||+||+|+.+ +|+.||+|++++.. ....+.+.+|.+++..+ +||||+++++++...+
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~-- 94 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-- 94 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--
Confidence 34578999999999999999999975 58899999997643 34467789999999988 8999999999887643
Q ss_pred eeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++||+.| ++...+.. .+.....++.|++.||+|||+ ++||.||+++.++.++++|||++..
T Consensus 95 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 95 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 44557777755 44444332 222334456899999998876 8999999999999999999998763
No 308
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.64 E-value=7.6e-17 Score=152.68 Aligned_cols=135 Identities=15% Similarity=0.185 Sum_probs=103.1
Q ss_pred hhccccc-ccccCCcceEEEEEeC---CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 361 DEFSENN-LIGKGGFGSVYKARLG---DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 361 ~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
++|.... .||+|+||.||+|... ++..||+|+++... ....+.+.+|++++++++||||+++++++.. + ..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcE
Confidence 4566665 8999999999999853 57889999997654 3346779999999999999999999999843 2 244
Q ss_pred eeecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++++++.++ +.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||+++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 567777654 3333321 122334456899999998876 89999999999999999999988643
No 309
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.63 E-value=1.9e-16 Score=155.32 Aligned_cols=141 Identities=14% Similarity=0.191 Sum_probs=109.0
Q ss_pred HHHHHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCc--------cHHHHHHHHHHHhcC-CCCCccccce
Q 010856 355 ELFRATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGR--------AFESFDVECEMMKNI-RHRNLIKILH 424 (499)
Q Consensus 355 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l-~H~niv~l~~ 424 (499)
......++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33455678999999999999999999974 7999999999765421 145678999999998 8999999999
Q ss_pred eEEccccceeeeeecccCCCcc-ccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEE
Q 010856 425 GVAVITFTVCLCLFHHSSASAS-ASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFV 493 (499)
Q Consensus 425 ~~~~~~~~~~~~l~~~~~~~~~-~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~ 493 (499)
++... ...++++|++.|+.+ +.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||
T Consensus 168 ~~~~~--~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 168 SYESS--SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEEBS--SEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEeeC--CEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecC
Confidence 88763 345567888866433 33221 222344456899999998876 899999999999999999999
Q ss_pred Eeec
Q 010856 494 FEIL 497 (499)
Q Consensus 494 ~~~~ 497 (499)
++..
T Consensus 246 ~~~~ 249 (365)
T 2y7j_A 246 FSCH 249 (365)
T ss_dssp TCEE
T ss_pred cccc
Confidence 8764
No 310
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.63 E-value=1e-16 Score=163.40 Aligned_cols=136 Identities=18% Similarity=0.216 Sum_probs=106.2
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.+.|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 102 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFY 102 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 467999999999999999999964 79999999997653 345678999999999999999999999987633 344
Q ss_pred eeeccc-CCCccccccccc----cccccccccccccceeecc------CCCcccEEEe---eCCCeEEEEEEEeec
Q 010856 436 CLFHHS-SASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFV---LEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~-~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~---~~~~~~~~~f~~~~~ 497 (499)
++++++ +|++.+.+.... .....++.|++.||+|||+ +++|.||++. .++.++++|||++..
T Consensus 103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 566666 445444443222 2234456899999999876 8999999994 567899999998754
No 311
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.63 E-value=1.2e-16 Score=163.15 Aligned_cols=136 Identities=12% Similarity=0.163 Sum_probs=101.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.+.|...+.||+|+||+||+|+. .++..||+|++.... ....+.+.+|+++++.++|||||++++++.... ..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 45699999999999999999996 478999999997654 334577999999999999999999999987633 4455
Q ss_pred eecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~~~~ 497 (499)
+++|+.| ++.+.+... +.....++.|++.||+|||+ ++||.||++...+ .++++|||++..
T Consensus 114 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 114 VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 6777755 443433322 22334456899999999876 8999999997643 499999998764
No 312
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.63 E-value=1e-16 Score=156.21 Aligned_cols=135 Identities=10% Similarity=0.104 Sum_probs=106.6
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCc---c--------------HHHHHHHHHHHhcCCCCCcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGR---A--------------FESFDVECEMMKNIRHRNLIKI 422 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~---~--------------~~~~~~E~~il~~l~H~niv~l 422 (499)
.++|...+.||+|+||.||+|+. +|+.||+|++...... . .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 8999999999754311 1 1789999999999999999999
Q ss_pred ceeEEccccceeeeeecccCC-Ccccc------ccc------cccccccccccccccceeecc-------CCCcccEEEe
Q 010856 423 LHGVAVITFTVCLCLFHHSSA-SASAS------LVS------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFV 482 (499)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~-~~~~~------l~~------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~ 482 (499)
++++...+ ..++++|++.+ ++.+. +.. .+.....++.|++.||+|||+ +++|.||+++
T Consensus 109 ~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC
T ss_pred EEEEeeCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc
Confidence 99987743 45567777766 44333 221 111233446889999988885 7999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||++..
T Consensus 187 ~~~~~kl~dfg~~~~ 201 (348)
T 2pml_X 187 KNGRVKLSDFGESEY 201 (348)
T ss_dssp TTSCEEECCCTTCEE
T ss_pred CCCcEEEeccccccc
Confidence 999999999998864
No 313
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.63 E-value=1.7e-16 Score=149.95 Aligned_cols=135 Identities=18% Similarity=0.183 Sum_probs=106.1
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC------ccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG------RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
++|...+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+ .
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~ 82 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--D 82 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--E
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--e
Confidence 56999999999999999999974 699999999976431 23678999999999999999999999987633 4
Q ss_pred eeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCC----CeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP----GVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~----~~~~~~f~~~~~ 497 (499)
.+++++++.+ .+.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++ .++++|||++..
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 4567777754 44333322 222344556899999998876 8999999998776 799999998764
No 314
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.63 E-value=1.8e-16 Score=151.37 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=107.2
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
+.|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ ..++++
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 99 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIM 99 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEE
Confidence 4588999999999999999995 578999999997654 344678999999999999999999999887633 445677
Q ss_pred cccCCCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 439 HHSSASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++.++.+..+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeeccccee
Confidence 87766543332221 22234456899999998876 8999999999999999999998754
No 315
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.63 E-value=1.1e-16 Score=151.25 Aligned_cols=135 Identities=18% Similarity=0.186 Sum_probs=105.0
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccc-------
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVIT------- 430 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~------- 430 (499)
...+|...+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++++++||||+++++++...+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467999999999999999999974 79999999997543 45779999999999999999999875421
Q ss_pred -------cceeeeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEE
Q 010856 431 -------FTVCLCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVI 490 (499)
Q Consensus 431 -------~~~~~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~ 490 (499)
....++++|++.+ .+.+.+.. .+.....++.|++.||+|||+ +++|.||++++++.++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence 2234567788766 44333321 122233456899999998876 899999999999999999
Q ss_pred EEEEeec
Q 010856 491 CFVFEIL 497 (499)
Q Consensus 491 ~f~~~~~ 497 (499)
|||++..
T Consensus 165 Dfg~~~~ 171 (284)
T 2a19_B 165 DFGLVTS 171 (284)
T ss_dssp CCTTCEE
T ss_pred cchhhee
Confidence 9998764
No 316
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.63 E-value=1e-16 Score=151.46 Aligned_cols=136 Identities=15% Similarity=0.282 Sum_probs=104.9
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEE
Confidence 46799999999999999999996 468999999997654 233567889999999999999999999987633 3455
Q ss_pred eecccCCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCC---eEEEEEEEeec
Q 010856 437 LFHHSSAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG---VEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~---~~~~~f~~~~~ 497 (499)
+++++.|+ +...+... ......++.|++.||+|||+ +++|.||+++.++. ++++|||++..
T Consensus 83 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 67777654 33333222 22234456889999998876 89999999976554 99999998754
No 317
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.63 E-value=1e-16 Score=163.52 Aligned_cols=137 Identities=18% Similarity=0.231 Sum_probs=106.4
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..+.|...+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 97 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFY 97 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEE
Confidence 346799999999999999999996 479999999997543 345678999999999999999999999987633 445
Q ss_pred eeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~ 497 (499)
++++++.| ++.+.+... ......++.|++.||+|||+ ++||.||++.. ++.++++|||++..
T Consensus 98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 56777654 444443322 22344556899999999876 89999999954 44699999998764
No 318
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.63 E-value=1.5e-16 Score=149.69 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=107.7
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 87 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFF 87 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEE
Confidence 467999999999999999999974 79999999997543 234567899999999999999999999987633 445
Q ss_pred eeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 160 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 160 (276)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccc
Confidence 67777755 44333322 222334456899999999876 8999999999999999999998754
No 319
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.63 E-value=6.4e-17 Score=160.32 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=102.9
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccc----cceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVIT----FTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~----~~~~~ 435 (499)
...|...+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++.... .....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346999999999999999999986666699998865432 1237999999999999999999986532 22345
Q ss_pred eeecccCCCccccccc--------cccccccccccccccceeecc------CCCcccEEEe-eCCCeEEEEEEEeecc
Q 010856 436 CLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV-LEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~-~~~~~~~~~f~~~~~~ 498 (499)
+++||+.+++...+.. .......++.|+++||+|||+ ++||.||+++ .++.++++|||+++.+
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 6788888775443321 112234456899999998876 8999999998 6788999999998653
No 320
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.63 E-value=8.7e-17 Score=152.42 Aligned_cols=137 Identities=12% Similarity=0.008 Sum_probs=99.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-cc-HHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-RA-FESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-~~-~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..++|...+.||+|+||.||+|+. .+|+.||+|++..... .. .+.+.+|...++.++||||+++++++...+ ..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~ 82 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVW 82 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEE
Confidence 346799999999999999999996 5799999999975532 22 233445555688899999999999987633 445
Q ss_pred eeecccCCCccccccc--------cccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++|++.|++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 83 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred EEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 6788888765443321 222334556899999988875 6899999999999999999999864
No 321
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.63 E-value=9.4e-17 Score=153.39 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=104.3
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..+.|...+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEE
Confidence 346799999999999999999996 479999999998665445567899999999999999999999987633 44567
Q ss_pred ecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEE---eeCCCeEEEEEEEeec
Q 010856 438 FHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVF---VLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~---~~~~~~~~~~f~~~~~ 497 (499)
+|++.| ++.+.+... ......++.|++.||+|||+ +++|.||++ ++++.++++|||++..
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 777755 443433222 22234456899999998876 899999999 5678899999998753
No 322
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.63 E-value=7.2e-17 Score=156.81 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=106.3
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHH-HhcCCCCCccccceeEEcccccee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEM-MKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~i-l~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
...++|...+.||+|+||.||+|+. .+|+.||||++.... .....++..|+.+ ++.++||||+++++++...+ ..
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~ 125 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DV 125 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cE
Confidence 3446788999999999999999996 579999999997654 2334556667766 78899999999999987643 45
Q ss_pred eeeecccCCCccccccc--------cccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.|++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 126 ~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 126 WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 56788888765443321 222334556899999988874 7999999999999999999998753
No 323
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.62 E-value=1.4e-16 Score=150.70 Aligned_cols=136 Identities=17% Similarity=0.210 Sum_probs=107.1
Q ss_pred hhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 90 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIY 90 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEE
Confidence 467999999999999999999964 68899999996542 233567999999999999999999999987633 445
Q ss_pred eeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 163 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163 (284)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEeccccccc
Confidence 67777755 44333332 222334456899999998877 8999999999999999999998753
No 324
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.62 E-value=1.8e-16 Score=162.38 Aligned_cols=137 Identities=13% Similarity=0.184 Sum_probs=104.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-------------ccHHHHHHHHHHHhcCCCCCccccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-------------RAFESFDVECEMMKNIRHRNLIKILH 424 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~il~~l~H~niv~l~~ 424 (499)
..+.|...+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 356799999999999999999996 4689999999975431 23567899999999999999999999
Q ss_pred eEEccccceeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCC---CeEEE
Q 010856 425 GVAVITFTVCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVI 490 (499)
Q Consensus 425 ~~~~~~~~~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~ 490 (499)
++...+ ..+++++++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||++..++ .++++
T Consensus 114 ~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 114 VFEDKK--YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEECSS--EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEcCC--EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 987633 44567777755 44444332 223344556899999998876 8999999998765 59999
Q ss_pred EEEEeec
Q 010856 491 CFVFEIL 497 (499)
Q Consensus 491 ~f~~~~~ 497 (499)
|||++..
T Consensus 192 Dfg~a~~ 198 (504)
T 3q5i_A 192 DFGLSSF 198 (504)
T ss_dssp CCTTCEE
T ss_pred ECCCCEE
Confidence 9998864
No 325
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.62 E-value=5.9e-17 Score=158.31 Aligned_cols=136 Identities=14% Similarity=0.134 Sum_probs=105.9
Q ss_pred hhhcccccccccCCcceEEEEEe----CCCCEEEEEEeeccC----CccHHHHHHHHHHHhcC-CCCCccccceeEEccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL----GDRMEVAVKVFNLQC----GRAFESFDVECEMMKNI-RHRNLIKILHGVAVIT 430 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~ 430 (499)
.++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999996 368999999996532 23346678899999999 6999999999887633
Q ss_pred cceeeeeecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 431 FTVCLCLFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 431 ~~~~~~l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++||+.+ .+.+.+... ......++.|++.||+|||+ ++||.||+++.++.++++|||+++.
T Consensus 133 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 --KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred --eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 44567788765 443333322 22233446799999999876 8999999999999999999999874
No 326
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.62 E-value=1.6e-16 Score=151.47 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=107.1
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccc-------
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVIT------- 430 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~------- 430 (499)
..++|+..+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356799999999999999999996 479999999996532 34567899999999999999999999876421
Q ss_pred ----cceeeeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEE
Q 010856 431 ----FTVCLCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVF 494 (499)
Q Consensus 431 ----~~~~~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~ 494 (499)
....++++|++.| ++.+.+... ......++.|+++||+|||+ +++|.||+++.++.++++|||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 2344557777755 444433321 12233456899999999876 8999999999999999999998
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
+..
T Consensus 163 ~~~ 165 (303)
T 1zy4_A 163 AKN 165 (303)
T ss_dssp CSC
T ss_pred hhh
Confidence 754
No 327
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.62 E-value=8.1e-17 Score=157.99 Aligned_cols=140 Identities=13% Similarity=0.054 Sum_probs=102.9
Q ss_pred HhhhcccccccccCCcceEEEEEeCC------CCEEEEEEeeccCCc-----------cHHHHHHHHHHHhcCCCCCccc
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGD------RMEVAVKVFNLQCGR-----------AFESFDVECEMMKNIRHRNLIK 421 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~il~~l~H~niv~ 421 (499)
..++|...+.||+|+||.||+|.... ++.||+|++...... ....+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34579999999999999999998643 478999998765311 1123456677788899999999
Q ss_pred cceeEEcccc--ceeeeeecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEe--eCCC
Q 010856 422 ILHGVAVITF--TVCLCLFHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV--LEPG 486 (499)
Q Consensus 422 l~~~~~~~~~--~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~--~~~~ 486 (499)
+++++...+. ...+++++++++++.+.+.. .+.....++.|++.||+|||+ ++||.||+++ .++.
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred EEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence 9999876321 33456777776555444332 223344556899999998875 8999999999 7889
Q ss_pred eEEEEEEEeecc
Q 010856 487 VEVICFVFEILL 498 (499)
Q Consensus 487 ~~~~~f~~~~~~ 498 (499)
++++|||+++.+
T Consensus 193 ~kl~DFG~a~~~ 204 (364)
T 3op5_A 193 VYLVDYGLAYRY 204 (364)
T ss_dssp EEECCCTTCEES
T ss_pred EEEEECCcceec
Confidence 999999998653
No 328
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.62 E-value=1.8e-16 Score=152.96 Aligned_cols=131 Identities=15% Similarity=0.138 Sum_probs=100.1
Q ss_pred hcccc---cccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CCCccccceeEEccccceeee
Q 010856 362 EFSEN---NLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 362 ~~~~~---~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~~~~~~~~~ 436 (499)
+|+.. +.||+|+||.||+|+. .+++.||+|++... ....+.+|+++++.+. ||||+++++++...+ ..++
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~l 83 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFL 83 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEE
Confidence 45543 7899999999999996 46899999999753 3467889999999997 999999999987633 4456
Q ss_pred eecccCC-Ccccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~~~~ 497 (499)
++|++.| ++.+.+... +.....++.|++.||+|||+ +++|.||++..++ .++++|||++..
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 84 VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp EECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 7777755 444444322 22344556899999998876 8999999998765 799999998864
No 329
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.62 E-value=2.1e-16 Score=149.49 Aligned_cols=137 Identities=17% Similarity=0.057 Sum_probs=105.9
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC--CccHHHHHHHHHHHhcC-CCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC--GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+.. +++.||+|++.... .....++.+|+..+..+ +||||+++++++...+ ..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eE
Confidence 4578999999999999999999974 79999999997653 33456788999999998 9999999999987633 44
Q ss_pred eeeecccCC-Cccccccc--------cccccccccccccccceeecc------CCCcccEEEeeC---------------
Q 010856 435 LCLFHHSSA-SASASLVS--------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE--------------- 484 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~--------------- 484 (499)
++++|++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 567777755 54444332 222344556899999998876 899999999743
Q ss_pred ----CCeEEEEEEEeec
Q 010856 485 ----PGVEVICFVFEIL 497 (499)
Q Consensus 485 ----~~~~~~~f~~~~~ 497 (499)
..++++|||.+..
T Consensus 167 ~~~~~~~kl~Dfg~~~~ 183 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTR 183 (289)
T ss_dssp ---CCCEEECCCTTCEE
T ss_pred cCCceEEEEcccccccc
Confidence 4799999998764
No 330
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.62 E-value=1.1e-16 Score=156.75 Aligned_cols=144 Identities=13% Similarity=0.052 Sum_probs=100.1
Q ss_pred HHHHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEcccc-
Q 010856 354 LELFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITF- 431 (499)
Q Consensus 354 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~- 431 (499)
.......++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44567778999999999999999999996 479999999986543 233567788888899999999999999865321
Q ss_pred ----ceeeeeecccCCCccccccc--------cccccccccccccccceeec--c------CCCcccEEEee-CCCeEEE
Q 010856 432 ----TVCLCLFHHSSASASASLVS--------SLTLSRPAKGGGFRGCVLWH--V------GVDFAAFVFVL-EPGVEVI 490 (499)
Q Consensus 432 ----~~~~~l~~~~~~~~~~~l~~--------~~~~~~~~~~~i~~gl~yLH--~------~~~p~~~l~~~-~~~~~~~ 490 (499)
...+++++++.+++...+.. .......++.|++.|++||| + ++||.||+++. ++.++++
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 22556788888875443221 11223344678899998888 4 89999999986 7899999
Q ss_pred EEEEeecc
Q 010856 491 CFVFEILL 498 (499)
Q Consensus 491 ~f~~~~~~ 498 (499)
|||+++..
T Consensus 175 Dfg~a~~~ 182 (360)
T 3e3p_A 175 DFGSAKKL 182 (360)
T ss_dssp CCTTCBCC
T ss_pred eCCCceec
Confidence 99998653
No 331
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.62 E-value=1e-16 Score=155.14 Aligned_cols=135 Identities=18% Similarity=0.176 Sum_probs=101.4
Q ss_pred hhcccccccccCCcceEEEEEeC-C----CCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-D----RMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..|...+.||+|+||.||+|+.. + +..||+|+++... ......+.+|++++++++||||+++++++... ...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY--KPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC--CCc
Confidence 45777899999999999999853 2 3469999997654 23456789999999999999999999998653 344
Q ss_pred eeeecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.++ +.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 5677877664 4333322 122234456899999998876 8999999999999999999999865
No 332
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.62 E-value=1.4e-16 Score=150.76 Aligned_cols=133 Identities=22% Similarity=0.244 Sum_probs=100.7
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCc-------cHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGR-------AFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999996 57999999999654321 1267899999999999999999999886533
Q ss_pred ceeeeeecccC-CCcccccccc-----ccccccccccccccceeecc--------CCCcccEEEeeCCC-----eEEEEE
Q 010856 432 TVCLCLFHHSS-ASASASLVSS-----LTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFVLEPG-----VEVICF 492 (499)
Q Consensus 432 ~~~~~l~~~~~-~~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~~~~~-----~~~~~f 492 (499)
.++++++. +++...+... +.....++.|++.||+|||+ +++|.||++..++. ++++||
T Consensus 97 ---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 ---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp ---EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred ---eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 24666665 4443433221 22234456888888876655 67999999987766 999999
Q ss_pred EEee
Q 010856 493 VFEI 496 (499)
Q Consensus 493 ~~~~ 496 (499)
|++.
T Consensus 174 g~~~ 177 (287)
T 4f0f_A 174 GLSQ 177 (287)
T ss_dssp TTCB
T ss_pred Cccc
Confidence 9875
No 333
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.62 E-value=1.1e-16 Score=153.01 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=98.9
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeec
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFH 439 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~ 439 (499)
.++|+..+.||+|+||.||+|+. .++.||+|++... ...+.+.+|++++++++||||+++++++.. ..++++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEE
Confidence 35788999999999999999997 4678999998643 345789999999999999999999998753 2345677
Q ss_pred ccCC-Cccccccccc-------cccccccccccccceeecc---------CCCcccEEEeeCCC-eEEEEEEEeec
Q 010856 440 HSSA-SASASLVSSL-------TLSRPAKGGGFRGCVLWHV---------GVDFAAFVFVLEPG-VEVICFVFEIL 497 (499)
Q Consensus 440 ~~~~-~~~~~l~~~~-------~~~~~~~~~i~~gl~yLH~---------~~~p~~~l~~~~~~-~~~~~f~~~~~ 497 (499)
++.| .+.+.+.... .....++.|+++||+|||+ +++|.||+++.++. ++++|||++..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 7755 4433333221 1123345788999998876 79999999988876 69999998753
No 334
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.62 E-value=2.3e-16 Score=149.11 Aligned_cols=132 Identities=9% Similarity=-0.086 Sum_probs=101.6
Q ss_pred hhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCc---cHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGR---AFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
+.|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 108 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLV 108 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEE
Confidence 56999999999999999999964 5899999999765422 2477999999999999999999999987633 4456
Q ss_pred eecccCCCcccccccccc---ccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEE
Q 010856 437 LFHHSSASASASLVSSLT---LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVF 494 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~~~---~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~ 494 (499)
++||+.|+.+..+..... ....++.|++.||+|||+ ++||.||++++++.++++++|.
T Consensus 109 v~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~ 175 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT 175 (286)
T ss_dssp EEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred EEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc
Confidence 778876544333222111 123346899999999876 8999999999888888876553
No 335
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.62 E-value=3.7e-17 Score=156.00 Aligned_cols=139 Identities=16% Similarity=0.163 Sum_probs=91.9
Q ss_pred HHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
....++|...+.||+|+||.||+|+. .+++.||+|++.... ....+++.+|++++++++||||+++++++...+ ..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 88 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--EL 88 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS--CE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--Cc
Confidence 34457899999999999999999995 478999999986543 334567889999999999999999999987644 34
Q ss_pred eeeecccCCC-cccccc------------ccccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 435 LCLFHHSSAS-ASASLV------------SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 435 ~~l~~~~~~~-~~~~l~------------~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
+++++++.|+ +.+.+. ........++.|++.||+|||+ +++|.||+++.++.++++|||++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 5577777554 333332 1122334456899999998876 89999999999999999999986
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 169 ~~ 170 (303)
T 2vwi_A 169 AF 170 (303)
T ss_dssp HH
T ss_pred he
Confidence 43
No 336
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.62 E-value=1.5e-16 Score=152.30 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=104.9
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCC---ccHHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG---RAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
..++|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~ 109 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QL 109 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eE
Confidence 3577999999999999999999964 789999999975432 22467899999999999999999999987633 44
Q ss_pred eeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.| .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 557777765 44333322 222334556899999998876 8999999999999999999998753
No 337
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.62 E-value=7.7e-17 Score=152.97 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=103.4
Q ss_pred HHhhhccccc-ccccCCcceEEEEEe---CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 358 RATDEFSENN-LIGKGGFGSVYKARL---GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 358 ~~~~~~~~~~-~lg~G~~g~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
.....|...+ .||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+++++.++||||+++++++.. .
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 90 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--E 90 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--S
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC--C
Confidence 3346788877 999999999999964 347889999997543 2235779999999999999999999998843 2
Q ss_pred ceeeeeecccCCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 432 TVCLCLFHHSSAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 432 ~~~~~l~~~~~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
..+++++++.++ +.+.+... ......++.|++.||+|||+ +++|.||+++.++.++++|||++...
T Consensus 91 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 91 -SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp -SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred -CcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 334567777544 43333222 22234456899999998876 89999999999999999999987643
No 338
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=4.9e-18 Score=151.56 Aligned_cols=112 Identities=21% Similarity=0.210 Sum_probs=49.4
Q ss_pred cccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCc
Q 010856 74 TLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDIL 153 (499)
Q Consensus 74 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~ 153 (499)
.+..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++|+.|++++|+++.+| .+..+++|+
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~ 118 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-GIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCC
Confidence 34444444444444444443 22 3444444444444444444 22333333444444444444444443 334444444
Q ss_pred EEEcCCCcCCCCCc-ccccCCCCccEEEccCCccccc
Q 010856 154 NLNFSSNFLTSPLP-LEIGNLKVLIGIDFSMNNFSGV 189 (499)
Q Consensus 154 ~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~ 189 (499)
+|++++|.+++..+ ..+..+++|+.|++++|.+++.
T Consensus 119 ~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 44444444443211 2344455555555555555433
No 339
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.61 E-value=2.2e-16 Score=152.20 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=101.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC--------ccHHHHHHHHHHHhcCCCCCccccceeEEccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG--------RAFESFDVECEMMKNIRHRNLIKILHGVAVIT 430 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~ 430 (499)
.++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46799999999999999999996 4689999999965421 12345889999999999999999999886533
Q ss_pred cceeeeeecccCC-Cccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCC---eEEEEEEEee
Q 010856 431 FTVCLCLFHHSSA-SASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG---VEVICFVFEI 496 (499)
Q Consensus 431 ~~~~~~l~~~~~~-~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~---~~~~~f~~~~ 496 (499)
.+++++++.+ ++.+.+.... .....++.|++.||+|||+ +++|.||+++.++. ++++|||++.
T Consensus 89 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 ---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp ---EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred ---eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 3456777755 4433333222 2233446899999998876 89999999987654 9999999886
Q ss_pred cc
Q 010856 497 LL 498 (499)
Q Consensus 497 ~~ 498 (499)
..
T Consensus 166 ~~ 167 (322)
T 2ycf_A 166 IL 167 (322)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 340
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.61 E-value=1.2e-16 Score=154.28 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=107.3
Q ss_pred HHhhhcccccccccCCcceEEEEEe--CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcC---CCCCccccceeEEcc-
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL--GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNI---RHRNLIKILHGVAVI- 429 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l---~H~niv~l~~~~~~~- 429 (499)
...++|...+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4557899999999999999999996 468899999996543 22234577888887765 899999999988631
Q ss_pred --ccceeeeeecccCCCccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 430 --TFTVCLCLFHHSSASASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 430 --~~~~~~~l~~~~~~~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
+....+++++++.|++...+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 2334566788888776554432 122234456899999998876 89999999999999999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 168 ~~ 169 (326)
T 1blx_A 168 RI 169 (326)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 341
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.61 E-value=1.9e-16 Score=152.91 Aligned_cols=134 Identities=18% Similarity=0.187 Sum_probs=101.8
Q ss_pred hhcccccccccCCcceEEEEEe-CCCCEE--EEEEeeccC-CccHHHHHHHHHHHhcC-CCCCccccceeEEccccceee
Q 010856 361 DEFSENNLIGKGGFGSVYKARL-GDRMEV--AVKVFNLQC-GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~v--avK~~~~~~-~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~ 435 (499)
++|...+.||+|+||.||+|+. .++..+ |+|.+.... ....+.+.+|+++++++ +||||+++++++...+ ..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceE
Confidence 6789999999999999999995 456654 999987543 33456799999999999 9999999999987633 445
Q ss_pred eeecccCC-Ccccccccc--------------------ccccccccccccccceeecc------CCCcccEEEeeCCCeE
Q 010856 436 CLFHHSSA-SASASLVSS--------------------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVE 488 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~~--------------------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~ 488 (499)
+++|++.+ ++.+.+... +.....++.|+++||+|||+ +++|.||+++.++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEE
Confidence 67777754 444433221 11233446899999998876 8999999999999999
Q ss_pred EEEEEEee
Q 010856 489 VICFVFEI 496 (499)
Q Consensus 489 ~~~f~~~~ 496 (499)
++|||++.
T Consensus 183 L~Dfg~~~ 190 (327)
T 1fvr_A 183 IADFGLSR 190 (327)
T ss_dssp ECCTTCEE
T ss_pred EcccCcCc
Confidence 99999876
No 342
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.61 E-value=2.6e-16 Score=147.65 Aligned_cols=135 Identities=19% Similarity=0.196 Sum_probs=98.8
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC----CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC----GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.++|...+.||+|+||.||+|+. .++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLC 82 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceE
Confidence 35789999999999999999997 47899999986543 223577899999999999999999999987633 345
Q ss_pred eeecccCCCcccccccc----ccccccccccccccceeec---------cCCCcccEEEee--------CCCeEEEEEEE
Q 010856 436 CLFHHSSASASASLVSS----LTLSRPAKGGGFRGCVLWH---------VGVDFAAFVFVL--------EPGVEVICFVF 494 (499)
Q Consensus 436 ~l~~~~~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH---------~~~~p~~~l~~~--------~~~~~~~~f~~ 494 (499)
++++++.|+.+..+... +.....++.|+++||+||| .+++|.||++.. ++.++++|||+
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 67777765544433222 2223445688999999875 477999999975 67799999998
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
+..
T Consensus 163 ~~~ 165 (271)
T 3dtc_A 163 ARE 165 (271)
T ss_dssp ---
T ss_pred ccc
Confidence 764
No 343
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.61 E-value=1.3e-16 Score=150.59 Aligned_cols=136 Identities=18% Similarity=0.217 Sum_probs=103.4
Q ss_pred HhhhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~ 433 (499)
..++|...+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~ 87 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE--PT 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS--SC
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CC
Confidence 4567999999999999999999852 23469999997653 23467799999999999999999999987542 22
Q ss_pred eeeeecccCC-Cccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+.+++++.+ ++.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 88 -~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 -WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp -EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred -EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 346666654 44333322 112233445799999998876 8999999999999999999998754
No 344
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.61 E-value=6.1e-17 Score=156.29 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=110.8
Q ss_pred cCHHHHHHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEc
Q 010856 351 FSYLELFRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAV 428 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~ 428 (499)
++..++....+.|...+.||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 33444456678899999999999999999996 579999999997543 3457799999999998 89999999999876
Q ss_pred cc----cceeeeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEE
Q 010856 429 IT----FTVCLCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVIC 491 (499)
Q Consensus 429 ~~----~~~~~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~ 491 (499)
.. ....++++|++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEee
Confidence 32 2344567788766 44333322 112233456899999999876 8999999999999999999
Q ss_pred EEEeec
Q 010856 492 FVFEIL 497 (499)
Q Consensus 492 f~~~~~ 497 (499)
||++..
T Consensus 173 fg~~~~ 178 (326)
T 2x7f_A 173 FGVSAQ 178 (326)
T ss_dssp CTTTC-
T ss_pred CcCcee
Confidence 998654
No 345
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.61 E-value=1.2e-16 Score=154.99 Aligned_cols=133 Identities=16% Similarity=0.155 Sum_probs=101.8
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..++|...+.||+|+||+||+|+. .+|+.||+|++++... ...+|++++.++ +||||+++++++...+ ..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEE
Confidence 457799999999999999999996 4689999999976542 245788888887 7999999999987633 4456
Q ss_pred eecccCC-Cccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCC----eEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG----VEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~----~~~~~f~~~~~ 497 (499)
++|++.| ++.+.+.... .....++.|++.||+|||+ ++||.||++.++++ ++++|||++..
T Consensus 94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 7777754 5444443322 2334456899999998876 89999999966543 99999998864
No 346
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.61 E-value=1.4e-16 Score=150.95 Aligned_cols=134 Identities=19% Similarity=0.255 Sum_probs=98.7
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
..++|+..+.||+|+||.||+|+.. ..||+|+++... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~l 96 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAI 96 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEE
Confidence 3467999999999999999999863 359999997554 23357799999999999999999999865432 2344
Q ss_pred eecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+++++.++ +...+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccc
Confidence 66666544 3333321 112233456899999998876 8999999999999999999998753
No 347
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.60 E-value=1.7e-16 Score=159.01 Aligned_cols=135 Identities=19% Similarity=0.187 Sum_probs=105.0
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC------CCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI------RHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l------~H~niv~l~~~~~~~~~~ 432 (499)
..+|...+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+++++.+ .|+||+++++++... .
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~--~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR--N 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET--T
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC--C
Confidence 35699999999999999999996 468999999997532 2345677888887765 677999999988763 3
Q ss_pred eeeeeecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeCCC--eEEEEEEEeec
Q 010856 433 VCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG--VEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~--~~~~~f~~~~~ 497 (499)
...++++++.+++.+.+... +.....++.|++.||+|||+ ++||.||+++.++. ++++|||++..
T Consensus 173 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 173 HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 45567888887765554322 22345567899999998876 89999999988776 99999998754
No 348
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.60 E-value=2.5e-16 Score=149.91 Aligned_cols=138 Identities=15% Similarity=0.177 Sum_probs=106.4
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---------ccHHHHHHHHHHHhcCC-CCCccccceeE
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---------RAFESFDVECEMMKNIR-HRNLIKILHGV 426 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~E~~il~~l~-H~niv~l~~~~ 426 (499)
...++|...+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3456799999999999999999996 4689999999975431 12456889999999995 99999999998
Q ss_pred EccccceeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 427 AVITFTVCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 427 ~~~~~~~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
... ...+++++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++
T Consensus 94 ~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 94 ETN--TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp ECS--SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ccC--CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 763 344567777765 44333332 222334456899999998766 89999999999999999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 172 ~~ 173 (298)
T 1phk_A 172 CQ 173 (298)
T ss_dssp EE
T ss_pred hh
Confidence 64
No 349
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.60 E-value=2.1e-16 Score=155.38 Aligned_cols=137 Identities=11% Similarity=0.008 Sum_probs=93.3
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC---ccHHHHHHHH---HHHhcCCCCCccccc-------ee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG---RAFESFDVEC---EMMKNIRHRNLIKIL-------HG 425 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~---~il~~l~H~niv~l~-------~~ 425 (499)
...|...+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|+ ++++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 34588999999999999999996 4799999999987542 2345677885 55566 799988755 33
Q ss_pred EEcccc---------------ceeeeeecccCCCcccccccc-----cccc------ccccccccccceeecc------C
Q 010856 426 VAVITF---------------TVCLCLFHHSSASASASLVSS-----LTLS------RPAKGGGFRGCVLWHV------G 473 (499)
Q Consensus 426 ~~~~~~---------------~~~~~l~~~~~~~~~~~l~~~-----~~~~------~~~~~~i~~gl~yLH~------~ 473 (499)
+..... ...++++||+.|++.+.+... .... ..++.|+++||+|||+ +
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 322110 235667888887776655431 1112 2344899999998876 8
Q ss_pred CCcccEEEeeCCCeEEEEEEEeec
Q 010856 474 VDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 474 ~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
+||.||+++.++.++++|||+++.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~ 243 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWK 243 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEE
T ss_pred CCHHHEEECCCCCEEEEecceeee
Confidence 999999999999999999999874
No 350
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.60 E-value=2.1e-16 Score=150.37 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=105.4
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~l 437 (499)
.++|...+.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|+++++.+ +|+|++++++++.. ....+++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE--GLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE--TTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC--CceeEEE
Confidence 35699999999999999999995 579999999986543 234688999999999 89999999988865 3344567
Q ss_pred ecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCC-----eEEEEEEEeec
Q 010856 438 FHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG-----VEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~-----~~~~~f~~~~~ 497 (499)
++++++++.+.+.. .......++.|++.||+|||+ +++|.||+++.++. ++++|||+++.
T Consensus 85 ~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 85 IDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 78776666554432 222344556899999998877 89999999987665 99999999864
No 351
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.60 E-value=3.1e-16 Score=150.51 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=101.3
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..+.|...+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEE
Confidence 4467999999999999999999964 69999999997643 3467999999999999999999999987633 44567
Q ss_pred ecccCCCccc-ccc-----ccccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 438 FHHSSASASA-SLV-----SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~-~l~-----~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++.++.+. .+. ........++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 7877664333 222 1222234456889999998876 8999999999999999999998754
No 352
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.60 E-value=2.4e-16 Score=166.35 Aligned_cols=138 Identities=13% Similarity=0.090 Sum_probs=107.2
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcC-CCCCccccceeEEccccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFT 432 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~ 432 (499)
...++|...+.||+|+||+||+|+. .+++.||||++++.. ....+.+.+|.+++..+ +||+|+++++++...+
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~-- 415 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-- 415 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--
Confidence 3457899999999999999999996 468999999997642 34457788999999987 7999999998876533
Q ss_pred eeeeeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..++++||+.| ++...+.. .+.....++.||+.||+|||+ ++||.|||++.++.++++|||++..
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 44557777755 44434332 222344556899999998876 8999999999999999999998763
No 353
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.60 E-value=8.7e-17 Score=155.73 Aligned_cols=140 Identities=16% Similarity=0.103 Sum_probs=106.7
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeC-CC-----CEEEEEEeeccCC-ccHHHHHHHHHHHhcC-CCCCccccceeEE
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLG-DR-----MEVAVKVFNLQCG-RAFESFDVECEMMKNI-RHRNLIKILHGVA 427 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~H~niv~l~~~~~ 427 (499)
+....++|...+.||+|+||.||+|... ++ ..||+|.+..... ...+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3445678999999999999999999953 23 4799999976542 3456799999999999 8999999999987
Q ss_pred ccccceeeeeecccCC-Cccccccc------------------cccccccccccccccceeecc------CCCcccEEEe
Q 010856 428 VITFTVCLCLFHHSSA-SASASLVS------------------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV 482 (499)
Q Consensus 428 ~~~~~~~~~l~~~~~~-~~~~~l~~------------------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~ 482 (499)
..+ ..+++++++.+ ++.+.+.. .......++.|++.||+|||+ +++|.||+++
T Consensus 121 ~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 121 HGG--PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSS--SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred cCC--ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence 633 34556777755 44333322 111233445799999998876 8999999999
Q ss_pred eCCCeEEEEEEEeec
Q 010856 483 LEPGVEVICFVFEIL 497 (499)
Q Consensus 483 ~~~~~~~~~f~~~~~ 497 (499)
.++.++++|||+++.
T Consensus 199 ~~~~~kl~Dfg~~~~ 213 (333)
T 2i1m_A 199 NGHVAKIGDFGLARD 213 (333)
T ss_dssp GGGEEEBCCCGGGCC
T ss_pred CCCeEEECccccccc
Confidence 999999999998764
No 354
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.60 E-value=3.5e-16 Score=151.02 Aligned_cols=145 Identities=9% Similarity=0.049 Sum_probs=109.1
Q ss_pred cCHHHHHHHhhhcccc-cccccCCcceEEEEEeC-CCCEEEEEEeeccC--CccHHHHHHHHHHHhcC-CCCCcccccee
Q 010856 351 FSYLELFRATDEFSEN-NLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC--GRAFESFDVECEMMKNI-RHRNLIKILHG 425 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l-~H~niv~l~~~ 425 (499)
..++......+.|... +.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++..+ +||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3444455556678777 88999999999999964 69999999997654 23367899999999998 56999999999
Q ss_pred EEccccceeeeeecccCCC-ccccccc------cccccccccccccccceeecc------CCCcccEEEee---CCCeEE
Q 010856 426 VAVITFTVCLCLFHHSSAS-ASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEV 489 (499)
Q Consensus 426 ~~~~~~~~~~~l~~~~~~~-~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~ 489 (499)
+...+ ..++++|++.|+ +...+.. .+.....++.|++.||+|||+ +++|.||+++. ++.+++
T Consensus 98 ~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 98 YENTS--EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp EECSS--EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred EEeCC--eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEE
Confidence 87633 445567777554 4333321 112234456899999998866 89999999987 689999
Q ss_pred EEEEEeec
Q 010856 490 ICFVFEIL 497 (499)
Q Consensus 490 ~~f~~~~~ 497 (499)
+|||+++.
T Consensus 176 ~Dfg~a~~ 183 (327)
T 3lm5_A 176 VDFGMSRK 183 (327)
T ss_dssp CCGGGCEE
T ss_pred eeCccccc
Confidence 99998865
No 355
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.60 E-value=2.1e-16 Score=165.63 Aligned_cols=129 Identities=13% Similarity=0.117 Sum_probs=99.9
Q ss_pred cccccCCcceEEEEEe---CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeeeccc
Q 010856 367 NLIGKGGFGSVYKARL---GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLFHHS 441 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~~~~ 441 (499)
+.||+|+||.||+|.+ .+++.||||+++... ....+++.+|++++++++|||||++++++... ..++++|++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEEcc
Confidence 4799999999999964 346789999997643 23467899999999999999999999988642 234567777
Q ss_pred CCC-cccccccc----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 442 SAS-ASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 442 ~~~-~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
.++ +.+.+... +.....++.||+.||+|||+ ++||.||+++.++.++++|||+++.+
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 554 43333322 22234556899999999876 89999999999999999999987643
No 356
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.59 E-value=5.4e-16 Score=146.83 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=106.2
Q ss_pred HhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
..++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS--SSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC--CeEE
Confidence 3467999999999999999999964 78999999997643 34567899999999999999999999998763 3445
Q ss_pred eeecccCC-Cccccccc----cccccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEEeec
Q 010856 436 CLFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVFEIL 497 (499)
Q Consensus 436 ~l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~~~~ 497 (499)
++++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++.++ .++++|||++..
T Consensus 98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 56777754 44333322 222344556899999998876 8999999997543 699999998754
No 357
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.59 E-value=3.3e-16 Score=151.29 Aligned_cols=136 Identities=11% Similarity=0.099 Sum_probs=103.8
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC-ccHHHHHHHHH-HHhcCCCCCccccceeEEccccceeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG-RAFESFDVECE-MMKNIRHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~-il~~l~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.++|...+.||+|+||.||+|.. .+|+.||+|++..... ....++.+|+. +++.++||||+++++++...+ ..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEE
Confidence 46788999999999999999996 4799999999976542 23445666766 778899999999999987643 4556
Q ss_pred eecccCCCccccccc---------cccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 437 LFHHSSASASASLVS---------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~~~~~~l~~---------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++|++.+++...+.. .+.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 99 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 788888765433321 122234456888898887765 7999999999999999999998754
No 358
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.59 E-value=4e-16 Score=151.81 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=99.5
Q ss_pred hhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccCCc-----------cHHHHHHHHHHHhcCCCCCcccccee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQCGR-----------AFESFDVECEMMKNIRHRNLIKILHG 425 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~il~~l~H~niv~l~~~ 425 (499)
++|...+.||+|+||.||+|+.. ++..||+|++...... ..+.+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999964 5788999999765321 12347788999999999999999998
Q ss_pred EEcc--ccceeeeeecccCCCcccccccc----ccccccccccccccceeecc------CCCcccEEEeeCC--CeEEEE
Q 010856 426 VAVI--TFTVCLCLFHHSSASASASLVSS----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP--GVEVIC 491 (499)
Q Consensus 426 ~~~~--~~~~~~~l~~~~~~~~~~~l~~~----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~--~~~~~~ 491 (499)
+... +....++++|++++++.+.+... +.....++.|++.||+|||+ +++|.||+++.++ .++++|
T Consensus 117 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~D 196 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLAD 196 (345)
T ss_dssp EEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECC
T ss_pred cccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEe
Confidence 8762 12344557777766655444332 22344556899999998877 8999999998777 999999
Q ss_pred EEEeecc
Q 010856 492 FVFEILL 498 (499)
Q Consensus 492 f~~~~~~ 498 (499)
||+++.+
T Consensus 197 fg~a~~~ 203 (345)
T 2v62_A 197 YGLSYRY 203 (345)
T ss_dssp CTTCEES
T ss_pred CCCceec
Confidence 9998643
No 359
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.59 E-value=3.9e-16 Score=148.01 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=103.2
Q ss_pred hcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcc--ccceeee
Q 010856 362 EFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVI--TFTVCLC 436 (499)
Q Consensus 362 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~--~~~~~~~ 436 (499)
.|...+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++... +....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 377788999999999999996 568899999997654 23456789999999999999999999988652 2233556
Q ss_pred eecccCC-Cccccccc----cccccccccccccccceeecc--------CCCcccEEEe-eCCCeEEEEEEEeec
Q 010856 437 LFHHSSA-SASASLVS----SLTLSRPAKGGGFRGCVLWHV--------GVDFAAFVFV-LEPGVEVICFVFEIL 497 (499)
Q Consensus 437 l~~~~~~-~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~--------~~~p~~~l~~-~~~~~~~~~f~~~~~ 497 (499)
+++++.+ .+.+.+.. .......++.|++.||+|||+ +++|.||+++ .++.++++|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 7788755 44333332 122234456888999987765 6799999997 678999999998754
No 360
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.59 E-value=3.2e-16 Score=166.31 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=105.0
Q ss_pred hhcccccccccCCcceEEEEEeC--CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccc---ee
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG--DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFT---VC 434 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~---~~ 434 (499)
++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+.. ..
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999964 68999999986543 23456789999999999999999999998764331 13
Q ss_pred eeeecccCCCcccccc---ccccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASASLV---SSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~~l~---~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++.|+.+.... ..+.....++.|++.||+|||+ ++||.||+++. +.++++|||++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-~~~kl~DFG~a~~ 230 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGAVSR 230 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SCEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-CcEEEEecccchh
Confidence 5678888765544332 1222344556899999998876 89999999976 5999999998764
No 361
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.59 E-value=2e-16 Score=152.76 Aligned_cols=136 Identities=15% Similarity=0.178 Sum_probs=100.1
Q ss_pred HhhhcccccccccCCcceEEEEEe------CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL------GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
..++|...+.||+|+||.||+|+. .+++.||+|++.... .....++.+|+.++++++||||+++++++...+
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 106 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 106 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-
Confidence 346799999999999999999983 357799999997543 234567899999999999999999999987633
Q ss_pred ceeeeeecccC-CCccccccccc-----------cccccccccccccceeecc------CCCcccEEEeeC---CCeEEE
Q 010856 432 TVCLCLFHHSS-ASASASLVSSL-----------TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE---PGVEVI 490 (499)
Q Consensus 432 ~~~~~l~~~~~-~~~~~~l~~~~-----------~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~---~~~~~~ 490 (499)
..+++++++. +++.+.+.... .....++.|++.||+|||+ +++|.||+++.+ ..++++
T Consensus 107 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 107 -PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred -CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 3355677774 44444333211 1123346899999998876 899999999843 459999
Q ss_pred EEEEee
Q 010856 491 CFVFEI 496 (499)
Q Consensus 491 ~f~~~~ 496 (499)
|||+++
T Consensus 186 Dfg~~~ 191 (327)
T 2yfx_A 186 DFGMAR 191 (327)
T ss_dssp CCHHHH
T ss_pred cccccc
Confidence 999864
No 362
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=5.6e-18 Score=151.17 Aligned_cols=132 Identities=19% Similarity=0.272 Sum_probs=73.7
Q ss_pred cccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCc
Q 010856 122 CFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLE 201 (499)
Q Consensus 122 ~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 201 (499)
.+..+++|++|++++|+++.+| .+..+++|++|++++|.++. +|..+..+++|+.|++++|++++. | .+..+++|+
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~ 118 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL-S-GIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHSS
T ss_pred HHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCCC
Confidence 4444445555555555554444 44444555555555555542 333444445566666666665542 2 455666677
Q ss_pred eeeCcCCcCCCCCC-ccccCCCCCCEEeCCCCcCCccCcc----------cccCCCCCCEEEccCCcCc
Q 010856 202 YLFLGYNRLQGSIP-DSFGDLISLKFLNLSNNNLSGAIPA----------SLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 202 ~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~N~l~~~~~~----------~~~~l~~L~~L~l~~N~l~ 259 (499)
+|++++|++++..+ ..+..+++|+.|++++|++++..|. .+..+++|+.|| +|+++
T Consensus 119 ~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 77777776664322 3566677777777777776654433 266677777765 55554
No 363
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.58 E-value=1.2e-15 Score=147.75 Aligned_cols=138 Identities=18% Similarity=0.135 Sum_probs=102.8
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcC--CCCCccccceeEEcccc--
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNI--RHRNLIKILHGVAVITF-- 431 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l--~H~niv~l~~~~~~~~~-- 431 (499)
-....++|...+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.....
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445578999999999999999999974 889999999643 234556677766654 99999999998876421
Q ss_pred ceeeeeecccCC-Cccccccc---cccccccccccccccceeec--------------cCCCcccEEEeeCCCeEEEEEE
Q 010856 432 TVCLCLFHHSSA-SASASLVS---SLTLSRPAKGGGFRGCVLWH--------------VGVDFAAFVFVLEPGVEVICFV 493 (499)
Q Consensus 432 ~~~~~l~~~~~~-~~~~~l~~---~~~~~~~~~~~i~~gl~yLH--------------~~~~p~~~l~~~~~~~~~~~f~ 493 (499)
...++++|++.+ ++.+.+.. .+.....++.|++.||+||| +++||.||+++.++.++++|||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred CceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 345567788765 44443322 22223445688899988876 3699999999999999999999
Q ss_pred Eeec
Q 010856 494 FEIL 497 (499)
Q Consensus 494 ~~~~ 497 (499)
+++.
T Consensus 188 ~a~~ 191 (337)
T 3mdy_A 188 LAVK 191 (337)
T ss_dssp TCEE
T ss_pred Ccee
Confidence 8754
No 364
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.58 E-value=1.2e-16 Score=153.30 Aligned_cols=145 Identities=14% Similarity=0.156 Sum_probs=110.5
Q ss_pred ccCHHHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCC--CCCcccccee
Q 010856 350 TFSYLELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIR--HRNLIKILHG 425 (499)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~--H~niv~l~~~ 425 (499)
.+.++.+.....+|...+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++ ||||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 344444455567799999999999999999998789999999997654 234577899999999997 5999999999
Q ss_pred EEccccceeeeeecccCCCccccccccc----cccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEe
Q 010856 426 VAVITFTVCLCLFHHSSASASASLVSSL----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 426 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
+...+ ..++++|+.++++.+.+.... .....++.|+++||+|||+ +++|.||+++ ++.++++|||++
T Consensus 97 ~~~~~--~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~ 173 (313)
T 3cek_A 97 EITDQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173 (313)
T ss_dssp EECSS--EEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred eecCC--EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccc
Confidence 87643 345567777766655443322 2234456899999999876 8999999994 589999999987
Q ss_pred ec
Q 010856 496 IL 497 (499)
Q Consensus 496 ~~ 497 (499)
..
T Consensus 174 ~~ 175 (313)
T 3cek_A 174 NQ 175 (313)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 365
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.58 E-value=5.4e-16 Score=153.83 Aligned_cols=133 Identities=11% Similarity=0.088 Sum_probs=99.8
Q ss_pred hhhcccc-cccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHh-cCCCCCccccceeEEcc--cccee
Q 010856 360 TDEFSEN-NLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMK-NIRHRNLIKILHGVAVI--TFTVC 434 (499)
Q Consensus 360 ~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~-~l~H~niv~l~~~~~~~--~~~~~ 434 (499)
.++|... +.||+|+||+||+|+. .+|+.||||+++. ...+.+|++++. ..+||||+++++++... +....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3567665 6899999999999996 4799999999963 245778998874 56899999999987541 12334
Q ss_pred eeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeec
Q 010856 435 LCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~ 497 (499)
++++||+.| ++.+.+.. .+.....++.|++.||+|||+ ++||.||+++. ++.++++|||+++.
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 567777755 44444432 222344556899999999876 89999999987 67899999999864
No 366
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.58 E-value=5e-16 Score=155.90 Aligned_cols=131 Identities=13% Similarity=0.048 Sum_probs=99.3
Q ss_pred cccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeeeeeccc
Q 010856 363 FSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLCLFHHS 441 (499)
Q Consensus 363 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~l~~~~ 441 (499)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++... ...++++|++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--~~~~lv~E~~ 91 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTD--RFLYIALELC 91 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECS--SEEEEEECCC
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecC--CeEEEEEecC
Confidence 4456889999999998766668999999999753 245678999999876 899999999887653 3455678888
Q ss_pred CCCcccccccccc-----------ccccccccccccceeecc------CCCcccEEEeeC-------------CCeEEEE
Q 010856 442 SASASASLVSSLT-----------LSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE-------------PGVEVIC 491 (499)
Q Consensus 442 ~~~~~~~l~~~~~-----------~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~-------------~~~~~~~ 491 (499)
+|++.+.+..... ....++.|++.||+|||+ ++||.||+++.+ ..++++|
T Consensus 92 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 7765554432211 112356899999999876 899999999754 3799999
Q ss_pred EEEeecc
Q 010856 492 FVFEILL 498 (499)
Q Consensus 492 f~~~~~~ 498 (499)
||++..+
T Consensus 172 FG~a~~~ 178 (434)
T 2rio_A 172 FGLCKKL 178 (434)
T ss_dssp CTTCEEC
T ss_pred cccceec
Confidence 9988653
No 367
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.58 E-value=1.4e-15 Score=147.75 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=106.8
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhc--CCCCCccccceeEEcccc--
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKN--IRHRNLIKILHGVAVITF-- 431 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~H~niv~l~~~~~~~~~-- 431 (499)
-....++|...+.||+|+||.||+|+. +|+.||+|++... ..+.+.+|++++.. ++||||+++++++...+.
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 344557899999999999999999998 5889999999643 34678889999887 799999999999876432
Q ss_pred ceeeeeecccCC-Cccccccc---cccccccccccccccceeec--------c------CCCcccEEEeeCCCeEEEEEE
Q 010856 432 TVCLCLFHHSSA-SASASLVS---SLTLSRPAKGGGFRGCVLWH--------V------GVDFAAFVFVLEPGVEVICFV 493 (499)
Q Consensus 432 ~~~~~l~~~~~~-~~~~~l~~---~~~~~~~~~~~i~~gl~yLH--------~------~~~p~~~l~~~~~~~~~~~f~ 493 (499)
...+++++++.+ ++.+.+.. .+.....++.|++.||+||| + +++|.||+++.++.++++|||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 244567777765 44443322 22223445689999999888 4 899999999999999999999
Q ss_pred Eeec
Q 010856 494 FEIL 497 (499)
Q Consensus 494 ~~~~ 497 (499)
+++.
T Consensus 193 ~~~~ 196 (342)
T 1b6c_B 193 LAVR 196 (342)
T ss_dssp TCEE
T ss_pred Ccee
Confidence 8764
No 368
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.58 E-value=1.2e-15 Score=147.81 Aligned_cols=135 Identities=22% Similarity=0.268 Sum_probs=99.2
Q ss_pred HhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHH--HhcCCCCCccccceeEEcc---ccce
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEM--MKNIRHRNLIKILHGVAVI---TFTV 433 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~i--l~~l~H~niv~l~~~~~~~---~~~~ 433 (499)
..++|...+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++... +...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 356799999999999999999987 68899999997532 3445555555 4468999999999866432 2223
Q ss_pred eeeeecccCC-Cccccccc---cccccccccccccccceeecc---------------CCCcccEEEeeCCCeEEEEEEE
Q 010856 434 CLCLFHHSSA-SASASLVS---SLTLSRPAKGGGFRGCVLWHV---------------GVDFAAFVFVLEPGVEVICFVF 494 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~---~~~~~~~~~~~i~~gl~yLH~---------------~~~p~~~l~~~~~~~~~~~f~~ 494 (499)
.++++|++.+ ++.+.+.. .+.....++.|+++||+|||+ ++||.||+++.++.++++|||+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 4567788755 44433322 122234456889999988774 5899999999999999999999
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
+..
T Consensus 167 a~~ 169 (336)
T 3g2f_A 167 SMR 169 (336)
T ss_dssp CEE
T ss_pred eee
Confidence 864
No 369
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.57 E-value=3.7e-16 Score=148.14 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=96.3
Q ss_pred hhhcccccccccCCcceEEEEEe--CCCC--EEEEEEeeccC---CccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL--GDRM--EVAVKVFNLQC---GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~--~~~~--~vavK~~~~~~---~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
.++|...+.||+|+||.||+|+. .+++ .||+|+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 35799999999999999999985 2333 68999987543 234578999999999999999999999887633
Q ss_pred eeeeeecccC-CCccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSS-ASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~-~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
...+++++. +.+.+.+.. .......++.|++.||+|||+ +++|.||+++.++.++++|||++..
T Consensus 95 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp -CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred -ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 334566664 454443322 122334456899999998876 8999999999999999999998764
No 370
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.57 E-value=6e-16 Score=162.81 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=104.5
Q ss_pred HHhhhcccccccccCCcceEEEEEeC----CCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEccccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG----DRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVITFT 432 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~ 432 (499)
...++|...+.||+|+||.||+|+.. .+..||+|.++... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--Cc
Confidence 34467888999999999999999863 25679999987543 2335779999999999999999999998843 22
Q ss_pred eeeeeecccCC-Ccccccccc-----ccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 433 VCLCLFHHSSA-SASASLVSS-----LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 433 ~~~~l~~~~~~-~~~~~l~~~-----~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
.++++|++.+ ++.+.+... +.....++.|++.||+|||+ +++|.||+++.++.++++|||+++.
T Consensus 465 -~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 465 -VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp -CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred -eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 3456777754 443333221 12233446899999999876 8999999999999999999999864
No 371
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.57 E-value=3.3e-16 Score=155.41 Aligned_cols=125 Identities=15% Similarity=0.169 Sum_probs=96.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC--------CCCccccceeEEcc-
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR--------HRNLIKILHGVAVI- 429 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~--------H~niv~l~~~~~~~- 429 (499)
.++|...+.||+|+||+||+|+. .+++.||+|++.... ...+.+.+|+++++.++ |+||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999995 578999999997432 33567889999999885 78899999988632
Q ss_pred -ccceeeeeecccCCCcccccccc------ccccccccccccccceeecc-------CCCcccEEEeeCC
Q 010856 430 -TFTVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEP 485 (499)
Q Consensus 430 -~~~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~ 485 (499)
+....+++++++++++...+... ......++.|++.||+|||+ ++||.||++..++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence 23355668888888876654322 22344556899999988876 5899999998664
No 372
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.56 E-value=1.4e-15 Score=143.11 Aligned_cols=138 Identities=14% Similarity=0.084 Sum_probs=101.5
Q ss_pred CHHHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCC------------------ccHHHHHHHHHHHhc
Q 010856 352 SYLELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCG------------------RAFESFDVECEMMKN 413 (499)
Q Consensus 352 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~il~~ 413 (499)
....+......|...+.||+|+||.||+|+..+|+.||+|.++.... .....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 34444555556777899999999999999997799999999964321 124568999999999
Q ss_pred CCCCCccccceeEEccccceeeeeecccCCCccccccccccccccccccccccceeecc------CCCcccEEEeeCCCe
Q 010856 414 IRHRNLIKILHGVAVITFTVCLCLFHHSSASASASLVSSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGV 487 (499)
Q Consensus 414 l~H~niv~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~ 487 (499)
++ | +++.+++.. ...++++|++.|+.+..+.. .....++.|+++||+|||+ ++||.||+++ ++.+
T Consensus 161 l~--~-~~v~~~~~~---~~~~lvmE~~~g~~L~~l~~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~v 231 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW---EGNAVLMELIDAKELYRVRV--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI 231 (282)
T ss_dssp TT--T-SSSCCEEEE---ETTEEEEECCCCEEGGGCCC--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEE
T ss_pred cc--C-CCcCeEEec---cceEEEEEecCCCcHHHcch--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcE
Confidence 98 5 666665533 22356788886654443422 2344567899999998765 8999999999 8999
Q ss_pred EEEEEEEeecc
Q 010856 488 EVICFVFEILL 498 (499)
Q Consensus 488 ~~~~f~~~~~~ 498 (499)
+++|||+++..
T Consensus 232 kl~DFG~a~~~ 242 (282)
T 1zar_A 232 WIIDFPQSVEV 242 (282)
T ss_dssp EECCCTTCEET
T ss_pred EEEECCCCeEC
Confidence 99999998743
No 373
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=2.4e-14 Score=124.01 Aligned_cols=89 Identities=21% Similarity=0.205 Sum_probs=50.8
Q ss_pred CCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEc
Q 010856 174 KVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNL 253 (499)
Q Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 253 (499)
++|+.|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34445555555555444555555555555555555555555555555666666666666666555555666666666666
Q ss_pred cCCcCcccC
Q 010856 254 SFNKLEGEI 262 (499)
Q Consensus 254 ~~N~l~~~~ 262 (499)
++|++++..
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 666665443
No 374
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.55 E-value=2.5e-16 Score=150.96 Aligned_cols=141 Identities=21% Similarity=0.203 Sum_probs=97.2
Q ss_pred HHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCC------ccHHHHHHHHHHHhcC----CCCCcccccee
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCG------RAFESFDVECEMMKNI----RHRNLIKILHG 425 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l----~H~niv~l~~~ 425 (499)
....++|...+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44557799999999999999999996 5789999999975432 1233466799998888 89999999998
Q ss_pred EEccccceeeeeeccc-CCCccccccc----cccccccccccccccceeecc------CCCcccEEEe-eCCCeEEEEEE
Q 010856 426 VAVITFTVCLCLFHHS-SASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV-LEPGVEVICFV 493 (499)
Q Consensus 426 ~~~~~~~~~~~l~~~~-~~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~-~~~~~~~~~f~ 493 (499)
+...+. .++++++++ ++++.+.+.. .+.....++.|++.||+|||+ +++|.||+++ .++.++++|||
T Consensus 107 ~~~~~~-~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 107 FETQEG-FMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp C------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred EecCCe-EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 866432 233333424 4444443332 222344456899999998876 8999999998 67889999999
Q ss_pred Eeecc
Q 010856 494 FEILL 498 (499)
Q Consensus 494 ~~~~~ 498 (499)
+++..
T Consensus 186 ~~~~~ 190 (312)
T 2iwi_A 186 SGALL 190 (312)
T ss_dssp SCEEC
T ss_pred hhhhc
Confidence 87653
No 375
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.55 E-value=1.6e-15 Score=144.40 Aligned_cols=134 Identities=11% Similarity=0.090 Sum_probs=101.1
Q ss_pred hhhcccc-cccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHH-hcCCCCCccccceeEEc--ccccee
Q 010856 360 TDEFSEN-NLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMM-KNIRHRNLIKILHGVAV--ITFTVC 434 (499)
Q Consensus 360 ~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il-~~l~H~niv~l~~~~~~--~~~~~~ 434 (499)
.++|... +.||+|+||.||+|+. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. .+....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 7899999999999996 5789999999964 24677899887 66799999999998864 112344
Q ss_pred eeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEee---CCCeEEEEEEEeecc
Q 010856 435 LCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---EPGVEVICFVFEILL 498 (499)
Q Consensus 435 ~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---~~~~~~~~f~~~~~~ 498 (499)
+++++++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++. ++.++++|||++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 567777755 54444332 122234456899999998876 89999999987 678999999988653
No 376
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.55 E-value=2.2e-16 Score=154.12 Aligned_cols=131 Identities=10% Similarity=0.018 Sum_probs=99.6
Q ss_pred hhcccccccccCCcceEEEEEeC---------CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccc----------
Q 010856 361 DEFSENNLIGKGGFGSVYKARLG---------DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIK---------- 421 (499)
Q Consensus 361 ~~~~~~~~lg~G~~g~v~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~---------- 421 (499)
++|...+.||+|+||.||+|+.. +++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57999999999999999999964 3789999999754 46889999999999999998
Q ss_pred -----cceeEEccccceeeeeecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEEeeC
Q 010856 422 -----ILHGVAVITFTVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE 484 (499)
Q Consensus 422 -----l~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~ 484 (499)
+++++... ....++++|++++++.+.+... +.....++.|++.||+|||+ +++|.||+++.+
T Consensus 117 ~~i~~~~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 117 LAIPTCMGFGVHQ-DKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CSCCCCCEEEEET-TTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT
T ss_pred cCccchhhccccC-CcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC
Confidence 44455432 2344557777766655544322 22334456899999999876 899999999887
Q ss_pred C--CeEEEEEEEeec
Q 010856 485 P--GVEVICFVFEIL 497 (499)
Q Consensus 485 ~--~~~~~~f~~~~~ 497 (499)
+ .++++|||+++.
T Consensus 196 ~~~~~kl~Dfg~a~~ 210 (352)
T 2jii_A 196 DQSQVTLAGYGFAFR 210 (352)
T ss_dssp EEEEEEECCGGGCBC
T ss_pred CCceEEEecCcceee
Confidence 7 899999999864
No 377
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=2.8e-14 Score=123.56 Aligned_cols=108 Identities=26% Similarity=0.224 Sum_probs=95.5
Q ss_pred cCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcC
Q 010856 128 SLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGY 207 (499)
Q Consensus 128 ~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~ 207 (499)
..+.+++++|+++.+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 45789999999999987663 8899999999999988888899999999999999999988888889999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEeCCCCcCCcc
Q 010856 208 NRLQGSIPDSFGDLISLKFLNLSNNNLSGA 237 (499)
Q Consensus 208 n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 237 (499)
|++++..+..|..+++|+.|+|++|+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999988777899999999999999998744
No 378
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.55 E-value=8.2e-16 Score=153.93 Aligned_cols=134 Identities=15% Similarity=0.123 Sum_probs=100.8
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
..+|...+.||+|+||+||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++...+ ..++++
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEE
Confidence 345888899999999997655456889999999965432 2356899999998 8999999998887633 446678
Q ss_pred cccCCCccccccccc-----cccccccccccccceeecc------CCCcccEEEeeC-----CCeEEEEEEEeecc
Q 010856 439 HHSSASASASLVSSL-----TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLE-----PGVEVICFVFEILL 498 (499)
Q Consensus 439 ~~~~~~~~~~l~~~~-----~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~-----~~~~~~~f~~~~~~ 498 (499)
|++.|++.+.+.... .....++.|+++||+|||+ ++||.||++..+ ..++++|||++..+
T Consensus 98 E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 98 ELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp ECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred ECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 888877655543321 1223456899999999876 899999999532 25789999998753
No 379
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.54 E-value=1.7e-15 Score=145.56 Aligned_cols=137 Identities=10% Similarity=0.055 Sum_probs=95.6
Q ss_pred HHhhhcccccccccCCcceEEEEEeC-CCCEEEEEEeeccCCc-c-HHHHHHHHHHHhcCCCCCccccceeEEcccccee
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGR-A-FESFDVECEMMKNIRHRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~ 434 (499)
...++|...+.||+|+||.||+|+.. +|+.||+|++...... . .+.+..+..+++.++||||+++++++...+ ..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~ 99 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DV 99 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cE
Confidence 34577999999999999999999974 7999999999765422 2 233445556788899999999999987643 44
Q ss_pred eeeecccCCCccccccc------cccccccccccccccceeecc-------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 435 LCLFHHSSASASASLVS------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 435 ~~l~~~~~~~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
++++|++++ ....+.. .......++.|+++||+|||+ +++|.||+++.++.++++|||++..
T Consensus 100 ~lv~e~~~~-~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 100 FIAMELMGT-CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEECCCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEEeccCC-cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 567788743 3232221 122233456889999988875 6999999999999999999998753
No 380
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.54 E-value=2.1e-15 Score=152.59 Aligned_cols=135 Identities=17% Similarity=0.138 Sum_probs=102.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++.+..+.++... ....++++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~-~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVE-GDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEE-TTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEee-CCEEEEEE
Confidence 36799999999999999999995 5799999999875542 24588999999999886666655555432 33445677
Q ss_pred cccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEE---eeCCCeEEEEEEEeec
Q 010856 439 HHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVF---VLEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~---~~~~~~~~~~f~~~~~ 497 (499)
+++++.+.+.+.. .+.....++.||+.||+|||+ ++||.||++ +.++.++++|||+++.
T Consensus 83 e~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 8887666554432 223344556899999998876 899999999 5778999999999864
No 381
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.54 E-value=1.1e-15 Score=145.35 Aligned_cols=136 Identities=16% Similarity=0.128 Sum_probs=101.9
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeee
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l 437 (499)
..++|...+.||+|+||.||+|+. .+++.||+|++..... .+.+.+|+++++.++|++++..++++...+ ...+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEET-TEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCC-CceEEE
Confidence 446799999999999999999995 5789999998765432 245889999999999999998888775533 334557
Q ss_pred ecccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEE---eeCCCeEEEEEEEeec
Q 010856 438 FHHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVF---VLEPGVEVICFVFEIL 497 (499)
Q Consensus 438 ~~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~---~~~~~~~~~~f~~~~~ 497 (499)
++++++++.+.+.. .......++.|++.||+|||+ +++|.||++ ++++.++++|||+++.
T Consensus 84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 77776665554431 222344556899999998876 899999999 6788999999998864
No 382
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.54 E-value=1.8e-15 Score=143.79 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=105.2
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCccccceeEEccccceeeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCLCLF 438 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~~l~ 438 (499)
.++|...+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+++++.++|++++..++++...+ ...++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEET-TEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCC-CceEEEE
Confidence 46799999999999999999995 5799999999876442 346899999999999999888887765533 3445577
Q ss_pred cccCCCccccccc-----cccccccccccccccceeecc------CCCcccEEEe---eCCCeEEEEEEEeec
Q 010856 439 HHSSASASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV---LEPGVEVICFVFEIL 497 (499)
Q Consensus 439 ~~~~~~~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~---~~~~~~~~~f~~~~~ 497 (499)
|++++++.+.+.. .......++.|++.||+|||+ +++|.||++. +++.++++|||++..
T Consensus 85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 7776665554431 222334456899999999876 8999999994 778999999998764
No 383
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=4.8e-14 Score=122.56 Aligned_cols=104 Identities=26% Similarity=0.268 Sum_probs=48.2
Q ss_pred CeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCc
Q 010856 130 RIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNR 209 (499)
Q Consensus 130 ~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 209 (499)
+.+++++|+++.+|..+. ++|++|+|++|.++++.+..|.++++|+.|+|++|+|+++.+..|..+++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 455555555555554332 445555555555554444444444444444444444444333334444444444444444
Q ss_pred CCCCCCccccCCCCCCEEeCCCCcCC
Q 010856 210 LQGSIPDSFGDLISLKFLNLSNNNLS 235 (499)
Q Consensus 210 l~~~~~~~l~~l~~L~~L~l~~N~l~ 235 (499)
|++..+..|..+++|+.|++++|++.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 44333333444444444444444443
No 384
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.53 E-value=5.7e-16 Score=160.59 Aligned_cols=138 Identities=16% Similarity=0.145 Sum_probs=102.5
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC-CccHHHHHHHHHHHhcCCCCCccccceeEEcc----ccce
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC-GRAFESFDVECEMMKNIRHRNLIKILHGVAVI----TFTV 433 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~----~~~~ 433 (499)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++... +...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999996 568999999987543 33456799999999999999999999886441 1223
Q ss_pred eeeeecccCC-Cccccccc-------cccccccccccccccceeecc------CCCcccEEEeeCCC---eEEEEEEEee
Q 010856 434 CLCLFHHSSA-SASASLVS-------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPG---VEVICFVFEI 496 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~-------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~---~~~~~f~~~~ 496 (499)
.+++++++.| ++...+.. .+.....++.|++.||+|||+ +++|.||+++.+++ ++++|||++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 4457777754 44333322 222334456899999999876 89999999987765 8999999986
Q ss_pred c
Q 010856 497 L 497 (499)
Q Consensus 497 ~ 497 (499)
.
T Consensus 173 ~ 173 (676)
T 3qa8_A 173 E 173 (676)
T ss_dssp B
T ss_pred c
Confidence 5
No 385
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.53 E-value=4.6e-16 Score=149.59 Aligned_cols=139 Identities=17% Similarity=0.252 Sum_probs=102.7
Q ss_pred HHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEEcccc
Q 010856 354 LELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVAVITF 431 (499)
Q Consensus 354 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~ 431 (499)
+++....++|...+.||+|+||.||+|+... .||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 102 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP- 102 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-
Confidence 3344456789999999999999999998743 49999987543 233456889999999999999999999987643
Q ss_pred ceeeeeecccCCC-ccccccc-----cccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 432 TVCLCLFHHSSAS-ASASLVS-----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 432 ~~~~~l~~~~~~~-~~~~l~~-----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
..+++++++.|+ +.+.+.. .......++.|++.||+|||+ +++|.||+++ ++.++++|||++..
T Consensus 103 -~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 103 -HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp -CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred -ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 345567777544 3333322 122334456899999998876 8999999996 68999999998653
No 386
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.52 E-value=1.1e-15 Score=146.98 Aligned_cols=140 Identities=17% Similarity=0.193 Sum_probs=104.3
Q ss_pred HHHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCc------cHHHHHHHHHHHhcCC--CCCccccceeEE
Q 010856 357 FRATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGR------AFESFDVECEMMKNIR--HRNLIKILHGVA 427 (499)
Q Consensus 357 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~il~~l~--H~niv~l~~~~~ 427 (499)
....++|...+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34456799999999999999999995 57899999999765321 2345778999999986 599999999987
Q ss_pred ccccceeeeeecccC--CCccccccc----cccccccccccccccceeecc------CCCcccEEEe-eCCCeEEEEEEE
Q 010856 428 VITFTVCLCLFHHSS--ASASASLVS----SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFV-LEPGVEVICFVF 494 (499)
Q Consensus 428 ~~~~~~~~~l~~~~~--~~~~~~l~~----~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~-~~~~~~~~~f~~ 494 (499)
..+ ..+++++++. +++.+.+.. .......++.|++.||+|||+ +++|.||+++ +++.++++|||+
T Consensus 119 ~~~--~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 119 RPD--SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp CSS--EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred cCC--cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 643 3344555554 444333332 222334456899999998866 8999999998 678999999998
Q ss_pred eecc
Q 010856 495 EILL 498 (499)
Q Consensus 495 ~~~~ 498 (499)
+...
T Consensus 197 ~~~~ 200 (320)
T 3a99_A 197 GALL 200 (320)
T ss_dssp CEEC
T ss_pred cccc
Confidence 7653
No 387
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=7.7e-14 Score=121.24 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=91.4
Q ss_pred CcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCC
Q 010856 152 ILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSN 231 (499)
Q Consensus 152 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 231 (499)
-+.+++++|.++. +|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 3688999999875 444443 7889999999999988888899999999999999999987777788899999999999
Q ss_pred CcCCccCcccccCCCCCCEEEccCCcCcccCC
Q 010856 232 NNLSGAIPASLEKLSYLENLNLSFNKLEGEIP 263 (499)
Q Consensus 232 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 263 (499)
|+|++..+..|..+++|+.|++++|++.+..+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99997777778889999999999998886543
No 388
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.51 E-value=2.1e-15 Score=146.15 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=104.4
Q ss_pred hhhcccccccccCCcceEEEEEe--CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCC------ccccceeEEcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL--GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRN------LIKILHGVAVITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n------iv~l~~~~~~~~~ 431 (499)
.++|...+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|+++++.++|++ |+++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35799999999999999999985 368899999997532 33567889999998877654 899998887633
Q ss_pred ceeeeeecccCCCccccccccc------cccccccccccccceeecc------CCCcccEEEee----------------
Q 010856 432 TVCLCLFHHSSASASASLVSSL------TLSRPAKGGGFRGCVLWHV------GVDFAAFVFVL---------------- 483 (499)
Q Consensus 432 ~~~~~l~~~~~~~~~~~l~~~~------~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~---------------- 483 (499)
..++++|++++++.+.+.... .....++.|++.||+|||+ +++|.||+++.
T Consensus 91 -~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 91 -HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp -EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred -cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 455678888777665554322 2234456899999998876 89999999976
Q ss_pred ---CCCeEEEEEEEeec
Q 010856 484 ---EPGVEVICFVFEIL 497 (499)
Q Consensus 484 ---~~~~~~~~f~~~~~ 497 (499)
++.++++|||++..
T Consensus 170 ~~~~~~~kl~Dfg~~~~ 186 (339)
T 1z57_A 170 TLINPDIKVVDFGSATY 186 (339)
T ss_dssp EESCCCEEECCCSSCEE
T ss_pred cccCCCceEeeCccccc
Confidence 55799999998764
No 389
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.51 E-value=2.4e-15 Score=155.30 Aligned_cols=128 Identities=10% Similarity=-0.041 Sum_probs=90.6
Q ss_pred cccCCcceEEEEE-eCCCCEEEEEEeeccC----------CccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeee
Q 010856 369 IGKGGFGSVYKAR-LGDRMEVAVKVFNLQC----------GRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 369 lg~G~~g~v~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.+.|+.|.+..++ +-.|+.||||++.+.. ....++|.+|+++|+++ .|+||+++++++.+ ....++
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed--~~~~yL 319 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN--AQSGWL 319 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC--SSEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE--CCEEEE
Confidence 5566666666555 2358899999997542 12346799999999999 79999999998876 335566
Q ss_pred eecccCCCccc-cccccccc-cccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 437 LFHHSSASASA-SLVSSLTL-SRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 437 l~~~~~~~~~~-~l~~~~~~-~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
++||+.|+.+. .+...... .++++.||+.||+|+|+ |+||+|||+++++.+|++|||+++.+
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 78888665444 33333222 34567899999999876 99999999999999999999998754
No 390
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.50 E-value=2.3e-15 Score=148.06 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=103.8
Q ss_pred hhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-----------CCCccccceeEE
Q 010856 360 TDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-----------HRNLIKILHGVA 427 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----------H~niv~l~~~~~ 427 (499)
.++|...+.||+|+||+||+|+. .+++.||+|++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999996 578999999997432 23567889999998876 899999999886
Q ss_pred ccc--cceeeeeecccCCCccccccc------cccccccccccccccceeecc-------CCCcccEEEeeCC------C
Q 010856 428 VIT--FTVCLCLFHHSSASASASLVS------SLTLSRPAKGGGFRGCVLWHV-------GVDFAAFVFVLEP------G 486 (499)
Q Consensus 428 ~~~--~~~~~~l~~~~~~~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~-------~~~p~~~l~~~~~------~ 486 (499)
..+ ....+++++++++++.+.+.. .......++.|++.||+|||+ +++|.||++..++ .
T Consensus 97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred ccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence 532 234566778887666554432 112234456888998888775 6999999996433 6
Q ss_pred eEEEEEEEeec
Q 010856 487 VEVICFVFEIL 497 (499)
Q Consensus 487 ~~~~~f~~~~~ 497 (499)
++++|||++..
T Consensus 177 ~kl~Dfg~a~~ 187 (373)
T 1q8y_A 177 IKIADLGNACW 187 (373)
T ss_dssp EEECCCTTCEE
T ss_pred EEEcccccccc
Confidence 99999998864
No 391
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.49 E-value=4.2e-15 Score=146.69 Aligned_cols=137 Identities=17% Similarity=0.222 Sum_probs=104.0
Q ss_pred HHhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CC-----CccccceeEEccc
Q 010856 358 RATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HR-----NLIKILHGVAVIT 430 (499)
Q Consensus 358 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~-----niv~l~~~~~~~~ 430 (499)
...++|...+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 4457899999999999999999996 468899999997432 23466788999888774 55 4888888887633
Q ss_pred cceeeeeecccCCCcccccccc------ccccccccccccccceeec--------cCCCcccEEEee--CCCeEEEEEEE
Q 010856 431 FTVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWH--------VGVDFAAFVFVL--EPGVEVICFVF 494 (499)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH--------~~~~p~~~l~~~--~~~~~~~~f~~ 494 (499)
...+++|++.+++.+.+... +.....++.|++.||+||| +++||.||++.. ++.++++|||+
T Consensus 130 --~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 --HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp --EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred --ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 45567888888766554322 2234455689999998886 389999999954 56799999999
Q ss_pred eec
Q 010856 495 EIL 497 (499)
Q Consensus 495 ~~~ 497 (499)
++.
T Consensus 208 a~~ 210 (382)
T 2vx3_A 208 SCQ 210 (382)
T ss_dssp CEE
T ss_pred cee
Confidence 864
No 392
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.49 E-value=2e-14 Score=147.70 Aligned_cols=126 Identities=12% Similarity=-0.001 Sum_probs=88.1
Q ss_pred ccccccccCCcceEEEEEeCCCCEEEEEEeeccCCc--------cHHHHHHHHHHHhcCCCCCccccceeEEccccceee
Q 010856 364 SENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGR--------AFESFDVECEMMKNIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 364 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
...+.||+|+||.||+|.. .++.+|+|+....... ..+++.+|++++++++||||+++..++...+ ..+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKR 415 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccE
Confidence 4457899999999999954 5778999987543211 1355899999999999999996666555432 335
Q ss_pred eeecccC-CCccccccccccccccccccccccceeecc------CCCcccEEEeeCCCeEEEEEEEeecc
Q 010856 436 CLFHHSS-ASASASLVSSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEPGVEVICFVFEILL 498 (499)
Q Consensus 436 ~l~~~~~-~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~~~~~~~f~~~~~~ 498 (499)
+++||+. +++.+.+.. ...++.|+++||+|||+ |+||.||++++ .++++|||+++..
T Consensus 416 lVmE~~~ggsL~~~l~~----~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED----NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEEECCCSEEHHHHSTT----CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEEECCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 6778876 444333333 45667899999998876 89999999987 9999999998754
No 393
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.49 E-value=4.1e-15 Score=145.13 Aligned_cols=135 Identities=16% Similarity=0.153 Sum_probs=104.3
Q ss_pred hhhcccccccccCCcceEEEEEeC-CC-CEEEEEEeeccCCccHHHHHHHHHHHhcCCCCC------ccccceeEEcccc
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLG-DR-MEVAVKVFNLQCGRAFESFDVECEMMKNIRHRN------LIKILHGVAVITF 431 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n------iv~l~~~~~~~~~ 431 (499)
.++|...+.||+|+||+||+|+.. ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 367999999999999999999963 44 789999997532 33567889999999888766 888887776533
Q ss_pred ceeeeeecccCCCcccccccc------ccccccccccccccceeecc------CCCcccEEE------------------
Q 010856 432 TVCLCLFHHSSASASASLVSS------LTLSRPAKGGGFRGCVLWHV------GVDFAAFVF------------------ 481 (499)
Q Consensus 432 ~~~~~l~~~~~~~~~~~l~~~------~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~------------------ 481 (499)
..++++|++++++...+... ......++.|++.||+|||+ +++|.||++
T Consensus 96 -~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 96 -HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp -EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred -eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 45567888888776654322 22344556899999998877 899999999
Q ss_pred -eeCCCeEEEEEEEeec
Q 010856 482 -VLEPGVEVICFVFEIL 497 (499)
Q Consensus 482 -~~~~~~~~~~f~~~~~ 497 (499)
+.++.++++|||++..
T Consensus 175 ~~~~~~~kl~Dfg~~~~ 191 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATF 191 (355)
T ss_dssp EESCCCEEECCCTTCEE
T ss_pred ccCCCcEEEeecCcccc
Confidence 5678999999998764
No 394
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.48 E-value=5.4e-15 Score=147.36 Aligned_cols=139 Identities=12% Similarity=-0.017 Sum_probs=96.0
Q ss_pred HhhhcccccccccCCcceEEEEEe-CCCCEEEEEEeeccC---CccHHHHHHHHHHHhcCCC-CCcccccee--------
Q 010856 359 ATDEFSENNLIGKGGFGSVYKARL-GDRMEVAVKVFNLQC---GRAFESFDVECEMMKNIRH-RNLIKILHG-------- 425 (499)
Q Consensus 359 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~H-~niv~l~~~-------- 425 (499)
....|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+.+++.++| +|......+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345578889999999999999995 579999999987443 2235789999999999987 332221111
Q ss_pred -E------------Eccc---cceeeeeecccCCCcccccc-----------ccccccccccccccccceeecc------
Q 010856 426 -V------------AVIT---FTVCLCLFHHSSASASASLV-----------SSLTLSRPAKGGGFRGCVLWHV------ 472 (499)
Q Consensus 426 -~------------~~~~---~~~~~~l~~~~~~~~~~~l~-----------~~~~~~~~~~~~i~~gl~yLH~------ 472 (499)
+ .... ....+.+++.+.+++.+.+. ..+.....++.|+++||+|||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1 0000 12334456666666554432 1112233445899999998876
Q ss_pred CCCcccEEEeeCCCeEEEEEEEeec
Q 010856 473 GVDFAAFVFVLEPGVEVICFVFEIL 497 (499)
Q Consensus 473 ~~~p~~~l~~~~~~~~~~~f~~~~~ 497 (499)
|+||.||+++.++.++++|||+++.
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~ 260 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVR 260 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEE
T ss_pred CcccceEEEecCCeEEEEeccceee
Confidence 8999999999999999999999764
No 395
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.48 E-value=1.5e-14 Score=140.07 Aligned_cols=134 Identities=12% Similarity=0.078 Sum_probs=95.8
Q ss_pred Hhhhcccc-cccccCCcceEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHH-HHHhcCCCCCccccceeEEccc--cce
Q 010856 359 ATDEFSEN-NLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCGRAFESFDVEC-EMMKNIRHRNLIKILHGVAVIT--FTV 433 (499)
Q Consensus 359 ~~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~-~il~~l~H~niv~l~~~~~~~~--~~~ 433 (499)
..++|... +.||+|+||.||+|+.. +|+.||+|++.... ...+|+ ..++.+.||||+++++++.... ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 44678884 46999999999999964 79999999996532 223333 3456779999999999886522 223
Q ss_pred eeeeecccCC-Cccccccc------cccccccccccccccceeecc------CCCcccEEEeeCC---CeEEEEEEEeec
Q 010856 434 CLCLFHHSSA-SASASLVS------SLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---GVEVICFVFEIL 497 (499)
Q Consensus 434 ~~~l~~~~~~-~~~~~l~~------~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---~~~~~~f~~~~~ 497 (499)
.++++|++.| ++.+.+.. .+.....++.|++.||+|||+ +++|.||+++.++ .++++|||++..
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 4557777765 44443322 122334456899999999876 8999999997644 499999998764
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.46 E-value=1.2e-12 Score=129.51 Aligned_cols=244 Identities=16% Similarity=0.103 Sum_probs=157.8
Q ss_pred CCCCCCCCEEECcCCCCCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCC---------------
Q 010856 1 MSNCKSLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGN--------------- 65 (499)
Q Consensus 1 l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n--------------- 65 (499)
|.+|++|+++.+.. .++.+... +|.++. +|+.+++..+ ++.+...+|.++++|+.+.+..+
T Consensus 67 F~~c~~L~~i~lp~-~i~~I~~~-aF~~c~-~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 67 FQGCRKVTEIKIPS-TVREIGEF-AFENCS-KLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTCTTEEEEECCT-TCCEECTT-TTTTCT-TCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred hhCCCCceEEEeCC-CccCcchh-HhhCCC-CCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 56788999999974 47766554 788887 8999999755 66677778888888877766533
Q ss_pred ------cCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccC-
Q 010856 66 ------KLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNK- 138 (499)
Q Consensus 66 ------~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~- 138 (499)
.+..+...+|.++++|+.+.+.++. ..+....|.++.+|+.+++..+ ++.+...+|.++..|+.+.+..+.
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~ 220 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY 220 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC
T ss_pred ccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce
Confidence 1112334567888899999997654 3366677888889999988766 555666677777777776664431
Q ss_pred -----------CCC--CC--------ccccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCC
Q 010856 139 -----------LTS--VP--------LTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGL 197 (499)
Q Consensus 139 -----------l~~--~~--------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 197 (499)
++. +| ..+..+..|+.+.+..+... +....|..+..++.+....+.+. ...|.++
T Consensus 221 ~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~ 296 (394)
T 4fs7_A 221 YLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGC 296 (394)
T ss_dssp EECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTC
T ss_pred EeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccc
Confidence 111 12 24566788888888776432 44556666666666665554332 2345556
Q ss_pred cCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCC
Q 010856 198 KNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN 256 (499)
Q Consensus 198 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 256 (499)
.+|+.+.+..+ ++.+....|.++.+|+.+++.++ ++.+...+|.++++|+.+++..|
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 66666666543 44455555666666666666533 55555556666666666666544
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.44 E-value=3.2e-12 Score=126.52 Aligned_cols=251 Identities=14% Similarity=0.077 Sum_probs=172.0
Q ss_pred CCccCChhccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccc-------
Q 010856 17 LDGILPKTSVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDN------- 89 (499)
Q Consensus 17 l~~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n------- 89 (499)
++.+... +|.++. +|+++.+.. .++.+...+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 59 VtsIg~~-AF~~c~-~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYA-AFQGCR-KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVE 134 (394)
T ss_dssp EEEECTT-TTTTCT-TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTT
T ss_pred EeEhHHH-HhhCCC-CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecce
Confidence 4444444 787777 899999975 488788889999999999999865 66677788999888888776533
Q ss_pred --------------cccccCCccccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCC-ccccCCCCCcE
Q 010856 90 --------------KLEGSIPDDICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVP-LTFWNLKDILN 154 (499)
Q Consensus 90 --------------~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~ 154 (499)
.+......+|.++++|+.+.+.++. ..+....|.++.+|+.+.+..+ ++.++ ..+.++..|+.
T Consensus 135 aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLEN 212 (394)
T ss_dssp TTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCB
T ss_pred eeecccccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccce
Confidence 1112234568888999999997654 4477789999999999999876 44432 24555555555
Q ss_pred EEcCCCc---------------------CCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCC
Q 010856 155 LNFSSNF---------------------LTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGS 213 (499)
Q Consensus 155 L~l~~n~---------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 213 (499)
+.+..+. ++.+....|..+..|+.+.+..+... +....|..+..++.+....+.+
T Consensus 213 i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i--- 288 (394)
T 4fs7_A 213 MEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV--- 288 (394)
T ss_dssp CCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---
T ss_pred eecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---
Confidence 5444332 12233345556666676666655432 5556666777777776665543
Q ss_pred CCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCcccCCCC-CCCCCccccccCCC
Q 010856 214 IPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GSFGNFSAESFEGN 279 (499)
Q Consensus 214 ~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~l~~N 279 (499)
....|..+.+|+.+.+.++ ++.+...+|.++++|+.+++..+ ++..-... ....+|+.+.+..|
T Consensus 289 ~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 289 PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3356888999999999765 77777889999999999999754 55333222 22345666666444
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.43 E-value=1.5e-15 Score=148.64 Aligned_cols=181 Identities=17% Similarity=0.123 Sum_probs=100.4
Q ss_pred CCCCeEecccccccccCCccccC-----cccccEEeeecCCCCCcCCccc-cCCccCCeeeccccCCCCCC-----ccc-
Q 010856 79 QKLQGLGLEDNKLEGSIPDDICH-----LAELYRLDLDGNKLSGSLPACF-SNLTSLRIVSLGSNKLTSVP-----LTF- 146 (499)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~-----~~~- 146 (499)
+.|+.|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.+++.. ..+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34555555555554332222221 1455555555555543222222 22345666666666665421 111
Q ss_pred cCCCCCcEEEcCCCcCCCC----CcccccCCCCccEEEccCCcccccC----cccccCCcCCceeeCcCCcCCCCC----
Q 010856 147 WNLKDILNLNFSSNFLTSP----LPLEIGNLKVLIGIDFSMNNFSGVI----PTEIGGLKNLEYLFLGYNRLQGSI---- 214 (499)
Q Consensus 147 ~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~~---- 214 (499)
...++|++|+|++|.+++. ++..+..+++|++|+|++|.+++.. +..+...++|++|+|++|.|++..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2346677777777766542 2233456677777777777776432 445666778888888888887532
Q ss_pred CccccCCCCCCEEeCCCCcCCccCcccccCCCC-----CCEEE--ccCCcCc
Q 010856 215 PDSFGDLISLKFLNLSNNNLSGAIPASLEKLSY-----LENLN--LSFNKLE 259 (499)
Q Consensus 215 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-----L~~L~--l~~N~l~ 259 (499)
...+...++|+.|+|++|.|+......+..+.. |+.+. +..|.++
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 234556788999999999988655555544321 55665 5666554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=5.5e-15 Score=144.59 Aligned_cols=159 Identities=19% Similarity=0.180 Sum_probs=121.6
Q ss_pred cccccEEeeecCCCCCcCCccccC-----CccCCeeeccccCCCC--CCccccCCCCCcEEEcCCCcCCCCCcccc----
Q 010856 102 LAELYRLDLDGNKLSGSLPACFSN-----LTSLRIVSLGSNKLTS--VPLTFWNLKDILNLNFSSNFLTSPLPLEI---- 170 (499)
Q Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---- 170 (499)
++.|++|+|++|.++......+.. .++|+.|+|++|.++. +..-...+++|+.|+|++|.+++.....+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998644443332 3699999999999976 22223345689999999999976443333
Q ss_pred -cCCCCccEEEccCCccccc----CcccccCCcCCceeeCcCCcCCCCC----CccccCCCCCCEEeCCCCcCCccC---
Q 010856 171 -GNLKVLIGIDFSMNNFSGV----IPTEIGGLKNLEYLFLGYNRLQGSI----PDSFGDLISLKFLNLSNNNLSGAI--- 238 (499)
Q Consensus 171 -~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~l~~N~l~~~~--- 238 (499)
...++|+.|+|++|.++.. ++..+..+++|++|+|++|.+++.. ...+...++|+.|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3568899999999999753 3344577899999999999998532 455677889999999999998543
Q ss_pred -cccccCCCCCCEEEccCCcCcc
Q 010856 239 -PASLEKLSYLENLNLSFNKLEG 260 (499)
Q Consensus 239 -~~~~~~l~~L~~L~l~~N~l~~ 260 (499)
...+...++|++|+|++|+|+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 3445567999999999999874
No 400
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.40 E-value=4.6e-14 Score=131.11 Aligned_cols=131 Identities=12% Similarity=0.039 Sum_probs=89.6
Q ss_pred hcccccccccCCcceEEEEEe-CCCCE--EEEEEeeccCCc------------------------cHHHHHHHHHHHhcC
Q 010856 362 EFSENNLIGKGGFGSVYKARL-GDRME--VAVKVFNLQCGR------------------------AFESFDVECEMMKNI 414 (499)
Q Consensus 362 ~~~~~~~lg~G~~g~v~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~il~~l 414 (499)
-|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366788999999999999997 68888 999997543210 013688999999999
Q ss_pred CCCCccccceeEEccccceeeeeecccCC-C-cccccc---cc--ccccccccccccccceeec-c------CCCcccEE
Q 010856 415 RHRNLIKILHGVAVITFTVCLCLFHHSSA-S-ASASLV---SS--LTLSRPAKGGGFRGCVLWH-V------GVDFAAFV 480 (499)
Q Consensus 415 ~H~niv~l~~~~~~~~~~~~~~l~~~~~~-~-~~~~l~---~~--~~~~~~~~~~i~~gl~yLH-~------~~~p~~~l 480 (499)
.|+++.-..-+.. ...++++||+++ + ....+. .. ......++.|++.||+||| + |++|.||+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NIL 203 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIM 203 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEE
Confidence 9887532221111 123457777743 1 111111 11 2233455688888888888 4 89999999
Q ss_pred EeeCCCeEEEEEEEeecc
Q 010856 481 FVLEPGVEVICFVFEILL 498 (499)
Q Consensus 481 ~~~~~~~~~~~f~~~~~~ 498 (499)
+.+ .+++||||+++..
T Consensus 204 l~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 204 YID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ESS--SEEECCCTTCEET
T ss_pred EcC--cEEEEECcccccC
Confidence 977 9999999998753
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=8.5e-13 Score=128.32 Aligned_cols=103 Identities=19% Similarity=0.151 Sum_probs=62.0
Q ss_pred eeecccc-CCCCCCccccCCCCCcEEEcCC-CcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCC
Q 010856 131 IVSLGSN-KLTSVPLTFWNLKDILNLNFSS-NFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYN 208 (499)
Q Consensus 131 ~L~L~~n-~l~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 208 (499)
.++++++ +++.+|. +..+++|+.|+|++ |.++++.+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 3455555 5666665 66666666666664 6666555555666666666666666666665656666666666666666
Q ss_pred cCCCCCCccccCCCCCCEEeCCCCcCC
Q 010856 209 RLQGSIPDSFGDLISLKFLNLSNNNLS 235 (499)
Q Consensus 209 ~l~~~~~~~l~~l~~L~~L~l~~N~l~ 235 (499)
+|+++.+..|..++ |+.|+|.+|++.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66655444454444 666666666655
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.37 E-value=3.6e-11 Score=118.89 Aligned_cols=247 Identities=13% Similarity=0.154 Sum_probs=134.0
Q ss_pred CCCCC-CCCEEECcCCCCCccCChhccccccccccEEEcccCC---CcccCCccccCCCCCCEEeccCCcCCccCCcccc
Q 010856 1 MSNCK-SLTLIYLSNNPLDGILPKTSVGNLSHSLEDFRMYNCN---ISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLS 76 (499)
Q Consensus 1 l~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~~L~~L~l~~n~---i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 76 (499)
|.+++ .|+.+.+..+ ++.+... +|.++. +|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.+...+|.
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~-AF~~C~-~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSN-AFYNCT-SLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTT-TTTTCT-TCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred ccCCCCcCEEEEECCC-eeEEhHH-HhhCCc-cCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 34553 5888888754 6656555 777777 78888887653 66666777888888888777654 4546666777
Q ss_pred CCCCCCeEecccccccccCCccccCcccccEEeeecCCCCCcCCccc----------------------cCCccCCeeec
Q 010856 77 KLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGNKLSGSLPACF----------------------SNLTSLRIVSL 134 (499)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----------------------~~l~~L~~L~L 134 (499)
.+.+|+.+.+..+ +..+....|....+|+.+.+..+ ++.+...+| ..+.+++....
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITS 212 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceecc
Confidence 7778887777643 33344556666666666666543 222333333 33333333322
Q ss_pred cccCCCC-----------------------------CC--------ccccCCCCCcEEEcCCCcCCCCCcccccCCCCcc
Q 010856 135 GSNKLTS-----------------------------VP--------LTFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLI 177 (499)
Q Consensus 135 ~~n~l~~-----------------------------~~--------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 177 (499)
..+.... +| ..|.++..|+.+.+..+.. .+....|.+++.|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~ 291 (394)
T 4gt6_A 213 DSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQ 291 (394)
T ss_dssp CCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCC
T ss_pred cccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccccc
Confidence 2211111 11 1233444555555543322 23344455555555
Q ss_pred EEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCc
Q 010856 178 GIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNK 257 (499)
Q Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 257 (499)
.+.+. +.++.+....|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|.
T Consensus 292 ~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 292 DIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred cccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 55553 2344444455555555555555433 44344455555555555555432 444445555555555555555543
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=9.8e-13 Score=127.88 Aligned_cols=131 Identities=23% Similarity=0.198 Sum_probs=106.0
Q ss_pred cEEEcCCC-cCCCCCcccccCCCCccEEEccC-CcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCCEEeCC
Q 010856 153 LNLNFSSN-FLTSPLPLEIGNLKVLIGIDFSM-NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLKFLNLS 230 (499)
Q Consensus 153 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 230 (499)
..++++++ .++. +|. +..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 8986 555 99999999999996 99999988999999999999999999999999999999999999999
Q ss_pred CCcCCccCcccccCCCCCCEEEccCCcCcccCCCCC--CCCCccccccCCCcCCCCCC
Q 010856 231 NNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGG--SFGNFSAESFEGNELLCGSP 286 (499)
Q Consensus 231 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~l~~~~l~~N~~~c~~~ 286 (499)
+|+|++..+..|..++ |+.|+|.+|++.+...... .+.......+..+...|..+
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 9999988888887776 9999999999986543211 01111223344566677654
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=9.1e-11 Score=115.99 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=99.3
Q ss_pred ccccccccccEEEcccCCCcccCCccccCCCCCCEEeccCCc---CCccCCccccCCCCCCeEecccccccccCCccccC
Q 010856 25 SVGNLSHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNK---LNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICH 101 (499)
Q Consensus 25 ~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 101 (499)
+|.+....|+.+.+-.+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.+....|..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 66665436999999754 777888999999999999998874 77677889999999999988765 55566778999
Q ss_pred cccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCC
Q 010856 102 LAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSS 159 (499)
Q Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~ 159 (499)
+.+|+.+.+..+ +..+....|..+.+|+.+.+..+ ++.+....+...+|+.+.+..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~ 191 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPA 191 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECT
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECC
Confidence 999999999754 45477788999999999988654 444433333334555555543
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.15 E-value=2e-09 Score=105.74 Aligned_cols=107 Identities=14% Similarity=0.062 Sum_probs=56.9
Q ss_pred ccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCCC
Q 010856 146 FWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISLK 225 (499)
Q Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 225 (499)
+....+|+.+.+..+ +..+....|.++..|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++.+....|.++++|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 334455555555433 33334445555566666665544 44444455555556666655432 3334445555566666
Q ss_pred EEeCCCCcCCccCcccccCCCCCCEEEccC
Q 010856 226 FLNLSNNNLSGAIPASLEKLSYLENLNLSF 255 (499)
Q Consensus 226 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 255 (499)
.+.+.++.++.+...+|.++.+|+.+++..
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCc
Confidence 666655555555555566666666666543
No 406
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.08 E-value=9e-12 Score=120.39 Aligned_cols=142 Identities=11% Similarity=-0.030 Sum_probs=87.0
Q ss_pred HHHHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCC--------------ccHHHHHHHHHHHhcCCCCCc
Q 010856 354 LELFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCG--------------RAFESFDVECEMMKNIRHRNL 419 (499)
Q Consensus 354 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~il~~l~H~ni 419 (499)
..+...-.-|.+...||+|+||.||+|..++|+.||||+++.... ........++++.....|+|+
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 444444445889999999999999999988899999999854210 111222333333333334444
Q ss_pred cccceeEEc----cccceeeeeecccCCCccccccccccccccccccccccceeecc------CCCcccEEEeeCC----
Q 010856 420 IKILHGVAV----ITFTVCLCLFHHSSASASASLVSSLTLSRPAKGGGFRGCVLWHV------GVDFAAFVFVLEP---- 485 (499)
Q Consensus 420 v~l~~~~~~----~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~------~~~p~~~l~~~~~---- 485 (499)
++++..... .+.....++++++.|.....+.. ....+.+..|++.||.|||+ |+||.|||+.+++
T Consensus 168 ~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS-VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp HHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC-CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSC
T ss_pred HHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc-cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccc
Confidence 433321110 01112246788887765444332 22234455788888877655 8999999998765
Q ss_pred ------CeEEEEEEEee
Q 010856 486 ------GVEVICFVFEI 496 (499)
Q Consensus 486 ------~~~~~~f~~~~ 496 (499)
++.+|||+-++
T Consensus 247 ~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMV 263 (397)
T ss_dssp TTSEEEEEEECCCTTCE
T ss_pred ccccccceEEEEeCCcc
Confidence 38899998554
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.08 E-value=2.2e-11 Score=117.98 Aligned_cols=154 Identities=17% Similarity=0.128 Sum_probs=88.3
Q ss_pred ccCcccccEEeeecCCCCCcCCccccCCccCCeeeccccCCCCC-Cccc--cCCCCCcEEEcCC--CcCC-CC----Ccc
Q 010856 99 ICHLAELYRLDLDGNKLSGSLPACFSNLTSLRIVSLGSNKLTSV-PLTF--WNLKDILNLNFSS--NFLT-SP----LPL 168 (499)
Q Consensus 99 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~--~~l~~L~~L~l~~--n~l~-~~----~~~ 168 (499)
+..+++|+.|+|++|.-... +. +. +++|+.|++..|.++.- ...+ ..+|+|++|+|+. |... +. +..
T Consensus 168 l~~~P~L~~L~L~g~~~l~l-~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLSI-GK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBTCBC-CS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCCcee-cc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 34455555565555521111 11 22 45666666666555431 1112 2456666666532 1111 10 001
Q ss_pred cc--cCCCCccEEEccCCcccccCccccc---CCcCCceeeCcCCcCCCCC----CccccCCCCCCEEeCCCCcCCccCc
Q 010856 169 EI--GNLKVLIGIDFSMNNFSGVIPTEIG---GLKNLEYLFLGYNRLQGSI----PDSFGDLISLKFLNLSNNNLSGAIP 239 (499)
Q Consensus 169 ~~--~~l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~l~~N~l~~~~~ 239 (499)
.+ ..+++|+.|+|.+|.+.+..+..+. .+++|++|+|+.|.+++.. +..+..+++|+.|++++|.|+....
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 12 2467888888888887643333332 4788999999999888642 2333556899999999999886555
Q ss_pred ccccC-CCCCCEEEccCCc
Q 010856 240 ASLEK-LSYLENLNLSFNK 257 (499)
Q Consensus 240 ~~~~~-l~~L~~L~l~~N~ 257 (499)
..+.. + ...+++++++
T Consensus 325 ~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHC--CSEEECCSBC
T ss_pred HHHHHHc--CCEEEecCCc
Confidence 54543 3 4678998887
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=9.2e-11 Score=113.68 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=105.6
Q ss_pred cCcccccEEeeecCCCC---------CcCCccccCCccCCeeeccccCCCCCCccccCCCCCcEEEcCCCcCCCCCcccc
Q 010856 100 CHLAELYRLDLDGNKLS---------GSLPACFSNLTSLRIVSLGSNKLTSVPLTFWNLKDILNLNFSSNFLTSPLPLEI 170 (499)
Q Consensus 100 ~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 170 (499)
..+++|+.|.+.++... +.+...+..+|+|+.|++++|.-..++. + .+++|+.|++..+.++......+
T Consensus 136 ~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l 213 (362)
T 2ra8_A 136 EKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLPDSVVEDI 213 (362)
T ss_dssp HHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCCHHHHHHH
T ss_pred hhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCChHHHHHH
Confidence 34566666666544321 1233455678999999999884233443 3 37899999999988764332333
Q ss_pred c--CCCCccEEEccC--Cccccc-----Ccccc--cCCcCCceeeCcCCcCCCCCCccc---cCCCCCCEEeCCCCcCCc
Q 010856 171 G--NLKVLIGIDFSM--NNFSGV-----IPTEI--GGLKNLEYLFLGYNRLQGSIPDSF---GDLISLKFLNLSNNNLSG 236 (499)
Q Consensus 171 ~--~l~~L~~L~l~~--n~l~~~-----~~~~l--~~l~~L~~L~L~~n~l~~~~~~~l---~~l~~L~~L~l~~N~l~~ 236 (499)
. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..+ ..+++|+.|+|+.|.+.+
T Consensus 214 ~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 214 LGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 3 689999999863 221111 11122 257899999999998875332233 257899999999999986
Q ss_pred cC----cccccCCCCCCEEEccCCcCcc
Q 010856 237 AI----PASLEKLSYLENLNLSFNKLEG 260 (499)
Q Consensus 237 ~~----~~~~~~l~~L~~L~l~~N~l~~ 260 (499)
.. +..+..+++|+.|++++|.++.
T Consensus 294 ~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 294 EGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 43 3334567999999999998874
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.98 E-value=4.2e-08 Score=96.24 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=65.4
Q ss_pred cccCCCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCcccccCcccccCCcCCceeeCcCCcCCCCCCccccCCCCC
Q 010856 145 TFWNLKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPDSFGDLISL 224 (499)
Q Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 224 (499)
.+.++..|+.+.+..+ ++.+....|.++..|+.+.+..+ +..+....|.++++|+.+.+.++.++.+....|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3455666666666554 44455556666666666666443 444455566666666666666666665556666666666
Q ss_pred CEEeCCCCcCCccCcccccCCCCCCEEEccC
Q 010856 225 KFLNLSNNNLSGAIPASLEKLSYLENLNLSF 255 (499)
Q Consensus 225 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 255 (499)
+.++|..+ ++.+...+|.++++|+.+.+..
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 66666543 5555556666666666665543
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.64 E-value=4.2e-09 Score=92.07 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=46.3
Q ss_pred CCCccEEEccCCccccc----CcccccCCcCCceeeCcCCcCCCC----CCccccCCCCCCEEeC--CCCcCCcc----C
Q 010856 173 LKVLIGIDFSMNNFSGV----IPTEIGGLKNLEYLFLGYNRLQGS----IPDSFGDLISLKFLNL--SNNNLSGA----I 238 (499)
Q Consensus 173 l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l--~~N~l~~~----~ 238 (499)
.++|++|+|++|.|... +...+...++|++|+|++|.|++. +...+...++|+.|+| ++|.|... +
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 34444444444444321 122233445566666666666542 2334555566777777 66666643 2
Q ss_pred cccccCCCCCCEEEccCCcCc
Q 010856 239 PASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 239 ~~~~~~l~~L~~L~l~~N~l~ 259 (499)
...+...++|++|++++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 234445567777777777664
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.64 E-value=4e-09 Score=92.21 Aligned_cols=89 Identities=11% Similarity=0.072 Sum_probs=47.5
Q ss_pred cCCCCCcEEEcCCCcCCCC----CcccccCCCCccEEEccCCccccc----CcccccCCcCCceeeC--cCCcCCCCC--
Q 010856 147 WNLKDILNLNFSSNFLTSP----LPLEIGNLKVLIGIDFSMNNFSGV----IPTEIGGLKNLEYLFL--GYNRLQGSI-- 214 (499)
Q Consensus 147 ~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L--~~n~l~~~~-- 214 (499)
...++|++|+|++|.+.+. +...+...+.|++|+|++|.|... +...+...++|++|+| ++|.++...
T Consensus 62 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~ 141 (185)
T 1io0_A 62 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 141 (185)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH
Confidence 3344455555555544431 112233344555555555555532 2344555666777777 667766432
Q ss_pred --CccccCCCCCCEEeCCCCcCC
Q 010856 215 --PDSFGDLISLKFLNLSNNNLS 235 (499)
Q Consensus 215 --~~~l~~l~~L~~L~l~~N~l~ 235 (499)
...+...++|+.|++++|.+.
T Consensus 142 ~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 142 EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCcCEEeccCCCCC
Confidence 234455577788888777765
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=7.8e-09 Score=95.02 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=45.4
Q ss_pred cCCCCCCeEeccccccccc--CCccccCcccccEEeeecCCCCCcCCccccCCc--cCCeeeccccCCCC-CC-------
Q 010856 76 SKLQKLQGLGLEDNKLEGS--IPDDICHLAELYRLDLDGNKLSGSLPACFSNLT--SLRIVSLGSNKLTS-VP------- 143 (499)
Q Consensus 76 ~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~-~~------- 143 (499)
.++++|+.|+|++|+|++. ++..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+.. +|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 3456666666666666652 234455666666666666666644 2222233 66777777776654 33
Q ss_pred ccccCCCCCcEEE
Q 010856 144 LTFWNLKDILNLN 156 (499)
Q Consensus 144 ~~~~~l~~L~~L~ 156 (499)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 1245567777665
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=3e-08 Score=91.07 Aligned_cols=57 Identities=26% Similarity=0.302 Sum_probs=26.5
Q ss_pred ccCCcCCceeeCcCCcCCCCCCccccCCC--CCCEEeCCCCcCCccCc-------ccccCCCCCCEEE
Q 010856 194 IGGLKNLEYLFLGYNRLQGSIPDSFGDLI--SLKFLNLSNNNLSGAIP-------ASLEKLSYLENLN 252 (499)
Q Consensus 194 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~--~L~~L~l~~N~l~~~~~-------~~~~~l~~L~~L~ 252 (499)
+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++.+..| ..+..+|+|+.||
T Consensus 192 ~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 192 VQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred HhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33444555555555554432 1122222 55555565555554332 2344556666554
No 414
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.30 E-value=3.6e-07 Score=84.55 Aligned_cols=88 Identities=14% Similarity=0.035 Sum_probs=63.6
Q ss_pred HHHHhhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CCCccccceeEEcccccee
Q 010856 356 LFRATDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HRNLIKILHGVAVITFTVC 434 (499)
Q Consensus 356 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~~~~~~~ 434 (499)
+......|......+.|+.+.||++.. .++.+++|+...........+.+|+++++.+. |..+.++++++... ...
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~ 85 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--GWS 85 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET--TEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC--Cce
Confidence 344556788888899999999999975 36789999987533223346889999998874 67778888776542 234
Q ss_pred eeeecccCCCcc
Q 010856 435 LCLFHHSSASAS 446 (499)
Q Consensus 435 ~~l~~~~~~~~~ 446 (499)
+.+++++.|...
T Consensus 86 ~lv~e~i~G~~l 97 (263)
T 3tm0_A 86 NLLMSEADGVLC 97 (263)
T ss_dssp EEEEECCSSEEH
T ss_pred EEEEEecCCeeh
Confidence 457788877643
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.25 E-value=2.7e-07 Score=78.64 Aligned_cols=85 Identities=13% Similarity=0.033 Sum_probs=47.7
Q ss_pred CCCCcEEEcCCCcCCCCCcccccCCCCccEEEccCCc-ccccCcccccCC----cCCceeeCcCCc-CCCCCCccccCCC
Q 010856 149 LKDILNLNFSSNFLTSPLPLEIGNLKVLIGIDFSMNN-FSGVIPTEIGGL----KNLEYLFLGYNR-LQGSIPDSFGDLI 222 (499)
Q Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l----~~L~~L~L~~n~-l~~~~~~~l~~l~ 222 (499)
-..|++||++++.+++..-..+.++++|+.|+|++|. +++..-..+..+ ++|++|+|++|. +++..-..+..++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3456777777776665444555666666666666664 544333334432 356666666653 5544334455556
Q ss_pred CCCEEeCCCCc
Q 010856 223 SLKFLNLSNNN 233 (499)
Q Consensus 223 ~L~~L~l~~N~ 233 (499)
+|+.|+++++.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 66666666553
No 416
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.22 E-value=2.7e-07 Score=78.58 Aligned_cols=84 Identities=15% Similarity=0.112 Sum_probs=47.7
Q ss_pred CCccEEEccCCcccccCcccccCCcCCceeeCcCCc-CCCCCCccccCC----CCCCEEeCCCCc-CCccCcccccCCCC
Q 010856 174 KVLIGIDFSMNNFSGVIPTEIGGLKNLEYLFLGYNR-LQGSIPDSFGDL----ISLKFLNLSNNN-LSGAIPASLEKLSY 247 (499)
Q Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~ 247 (499)
..|+.||++++.++...-..+.++++|++|+|++|. +++.....+..+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 346666666666655544555566666666666663 554333344443 356666666653 55544445556666
Q ss_pred CCEEEccCCc
Q 010856 248 LENLNLSFNK 257 (499)
Q Consensus 248 L~~L~l~~N~ 257 (499)
|+.|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666654
No 417
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.09 E-value=1.3e-06 Score=80.54 Aligned_cols=83 Identities=11% Similarity=-0.031 Sum_probs=54.9
Q ss_pred hhhcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCC--ccccceeEEccccceeeee
Q 010856 360 TDEFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRN--LIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 360 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n--iv~l~~~~~~~~~~~~~~l 437 (499)
...+......+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++.... ...+++
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~--~~~~~v 93 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--GRDWLL 93 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--SCEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC--CCCEEE
Confidence 3445544444566679999998777888999987543 2245789999998886545 44577665442 224567
Q ss_pred ecccCCCccc
Q 010856 438 FHHSSASASA 447 (499)
Q Consensus 438 ~~~~~~~~~~ 447 (499)
++++.|....
T Consensus 94 ~e~i~G~~l~ 103 (264)
T 1nd4_A 94 LGEVPGQDLL 103 (264)
T ss_dssp EECCSSEETT
T ss_pred EEecCCcccC
Confidence 8888776543
No 418
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.72 E-value=8.9e-06 Score=70.59 Aligned_cols=88 Identities=18% Similarity=0.090 Sum_probs=45.2
Q ss_pred cCCCCccEEEccCCcccccC----cccccCCcCCceeeCcCCcCCCC----CCccccCCCCCCEEeCCCC---cCCc---
Q 010856 171 GNLKVLIGIDFSMNNFSGVI----PTEIGGLKNLEYLFLGYNRLQGS----IPDSFGDLISLKFLNLSNN---NLSG--- 236 (499)
Q Consensus 171 ~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~N---~l~~--- 236 (499)
..-+.|+.|+|++|+|.+.. ...+..-+.|++|+|++|.|.+. +.+.+..-+.|+.|+|++| .+..
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 33444555555555554322 22233445666666666666542 1233445556777777654 2332
Q ss_pred -cCcccccCCCCCCEEEccCCcC
Q 010856 237 -AIPASLEKLSYLENLNLSFNKL 258 (499)
Q Consensus 237 -~~~~~~~~l~~L~~L~l~~N~l 258 (499)
.+...+...++|+.|+++.|.+
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhCCCcCeEeccCCCc
Confidence 1234455566777777765543
No 419
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.64 E-value=9.1e-06 Score=70.54 Aligned_cols=62 Identities=11% Similarity=0.003 Sum_probs=30.1
Q ss_pred CCCccEEEccCCccccc----CcccccCCcCCceeeCcCCc---CCC----CCCccccCCCCCCEEeCCCCcC
Q 010856 173 LKVLIGIDFSMNNFSGV----IPTEIGGLKNLEYLFLGYNR---LQG----SIPDSFGDLISLKFLNLSNNNL 234 (499)
Q Consensus 173 l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~---l~~----~~~~~l~~l~~L~~L~l~~N~l 234 (499)
-+.|+.|+|++|.|... +...+..-+.|++|+|++|. +.. .+...+..-++|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34455555555554432 12233444556666666442 221 1223345556677777766644
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.29 E-value=0.00042 Score=56.05 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=19.4
Q ss_pred cccccEEEcccCCCcccCCccccCCCCCCEEeccCCcC
Q 010856 30 SHSLEDFRMYNCNISGGIPEEISNLTNSTIVNLGGNKL 67 (499)
Q Consensus 30 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 67 (499)
|.+|++|+|++|+|+.+.++.|..+++|++|+|++|.+
T Consensus 30 p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 30 PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 33455555555555544444455555555555555544
No 421
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.27 E-value=0.00017 Score=69.68 Aligned_cols=80 Identities=8% Similarity=0.010 Sum_probs=50.9
Q ss_pred ccccccCCcceEEEEEeCCCCEEEEEEee--ccC-CccHHHHHHHHHHHhcCC--CCCccccceeEEcccc-ceeeeeec
Q 010856 366 NNLIGKGGFGSVYKARLGDRMEVAVKVFN--LQC-GRAFESFDVECEMMKNIR--HRNLIKILHGVAVITF-TVCLCLFH 439 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~il~~l~--H~niv~l~~~~~~~~~-~~~~~l~~ 439 (499)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|.++++.+. +..+.++++++...+. ...+.+++
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999998754 578888776 332 123456889999999886 4557787777654321 12345788
Q ss_pred ccCCCcc
Q 010856 440 HSSASAS 446 (499)
Q Consensus 440 ~~~~~~~ 446 (499)
++.|...
T Consensus 122 ~v~G~~l 128 (359)
T 3dxp_A 122 FVSGRVL 128 (359)
T ss_dssp CCCCBCC
T ss_pred ecCCeec
Confidence 8877644
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.23 E-value=0.00066 Score=54.87 Aligned_cols=56 Identities=29% Similarity=0.382 Sum_probs=31.4
Q ss_pred eeeCcCCcCC-CCCCccccCCCCCCEEeCCCCcCCccCcccccCCCCCCEEEccCCcCc
Q 010856 202 YLFLGYNRLQ-GSIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 259 (499)
Q Consensus 202 ~L~L~~n~l~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 259 (499)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5556666655 12232222 25667777777776666666666666666655544443
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.34 E-value=0.0024 Score=59.42 Aligned_cols=95 Identities=11% Similarity=-0.043 Sum_probs=68.0
Q ss_pred cccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCC---CccccceeEEccccceeeeeeccc
Q 010856 365 ENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHR---NLIKILHGVAVITFTVCLCLFHHS 441 (499)
Q Consensus 365 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~---niv~l~~~~~~~~~~~~~~l~~~~ 441 (499)
..+.++.|.++.||++...+|+.+++|+...........|.+|++.++.+.|. .+.+++++. ..+.+++++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEEEec
Confidence 35679999999999999888999999987544333346789999999999875 466666542 234577888
Q ss_pred CCCccccccccccccccccccccccceeeccCC
Q 010856 442 SASASASLVSSLTLSRPAKGGGFRGCVLWHVGV 474 (499)
Q Consensus 442 ~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~~~ 474 (499)
.|.... ...+.++++.|+-||+..
T Consensus 93 ~g~~~~---------~~~~~~lg~~LA~LH~~~ 116 (288)
T 3d1u_A 93 DERPPT---------PEAAERFGHQLAAMHLAG 116 (288)
T ss_dssp CCCCCC---------HHHHHHHHHHHHHHHHTC
T ss_pred ccCCCC---------hHHHHHHHHHHHHHHcCC
Confidence 776421 122346678888899843
No 424
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=94.50 E-value=0.017 Score=54.53 Aligned_cols=73 Identities=11% Similarity=0.078 Sum_probs=46.8
Q ss_pred hcccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCC--C--CccccceeEEccccceeeee
Q 010856 362 EFSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRH--R--NLIKILHGVAVITFTVCLCL 437 (499)
Q Consensus 362 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H--~--niv~l~~~~~~~~~~~~~~l 437 (499)
.+...+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+ . .+.+++++ . ..+.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--~----~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ--S----DRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--C----SSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--C----CcEEE
Confidence 3445677899999999988 566888876432 123568899999888865 1 23343332 1 23456
Q ss_pred ecccCCCcc
Q 010856 438 FHHSSASAS 446 (499)
Q Consensus 438 ~~~~~~~~~ 446 (499)
++++.|...
T Consensus 106 me~i~G~~l 114 (320)
T 3r70_A 106 MKYIKGERI 114 (320)
T ss_dssp EECCCCBCC
T ss_pred EeecCCccc
Confidence 777766644
No 425
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=91.69 E-value=0.11 Score=48.55 Aligned_cols=74 Identities=5% Similarity=-0.041 Sum_probs=46.8
Q ss_pred ccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCC---CccccceeEEccccceeeeeecccC
Q 010856 366 NNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHR---NLIKILHGVAVITFTVCLCLFHHSS 442 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~---niv~l~~~~~~~~~~~~~~l~~~~~ 442 (499)
...++.|....||+. |..+++|+-.. ......+.+|.++++.+.+. -+.+.+.+....+... +++++++.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~-~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNP-FVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCE-EEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCce-EEEEeccC
Confidence 345788888899987 45678887421 12346789999999988653 2445554443222223 35777777
Q ss_pred CCcc
Q 010856 443 ASAS 446 (499)
Q Consensus 443 ~~~~ 446 (499)
|...
T Consensus 97 G~~l 100 (306)
T 3tdw_A 97 GQIL 100 (306)
T ss_dssp SEEC
T ss_pred CeEC
Confidence 7643
No 426
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=91.02 E-value=0.027 Score=56.09 Aligned_cols=60 Identities=12% Similarity=0.062 Sum_probs=17.6
Q ss_pred cccccccCCcceEEEEEeCC-CCEEEE------EEeeccC--CccHHHHHHHHHHHhcCCCCCccccceeEE
Q 010856 365 ENNLIGKGGFGSVYKARLGD-RMEVAV------KVFNLQC--GRAFESFDVECEMMKNIRHRNLIKILHGVA 427 (499)
Q Consensus 365 ~~~~lg~G~~g~v~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~il~~l~H~niv~l~~~~~ 427 (499)
+.+.+| ||.||+|.+.. ...||+ |..+... ......|.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999999743 467888 6665432 233457899999999999999999988754
No 427
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=89.90 E-value=0.05 Score=50.79 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=43.7
Q ss_pred ccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCc--cccceeEEcccc-ceeeeeeccc
Q 010856 366 NNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNL--IKILHGVAVITF-TVCLCLFHHS 441 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~ni--v~l~~~~~~~~~-~~~~~l~~~~ 441 (499)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+ .+..+ .+.++.....+. ...+.+++++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3558899999999763 45788875432 2356789999999877 33332 333322211111 1123456777
Q ss_pred CCCcc
Q 010856 442 SASAS 446 (499)
Q Consensus 442 ~~~~~ 446 (499)
.|...
T Consensus 99 ~G~~l 103 (304)
T 3sg8_A 99 KGVPL 103 (304)
T ss_dssp CCEEC
T ss_pred CCeEC
Confidence 66543
No 428
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.56 E-value=0.29 Score=30.34 Aligned_cols=17 Identities=29% Similarity=0.360 Sum_probs=6.6
Q ss_pred hhhHHHHHHHHHHhhhc
Q 010856 316 TTFMIVVILLILRYQQR 332 (499)
Q Consensus 316 ~~~~~~~~~~~~~~~~~ 332 (499)
.++++++.+.++++.||
T Consensus 21 v~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 21 LLLLLVVALGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 33333333443444333
No 429
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=86.93 E-value=0.47 Score=29.32 Aligned_cols=16 Identities=19% Similarity=0.287 Sum_probs=6.1
Q ss_pred hhhHHHHHHHHHHhhh
Q 010856 316 TTFMIVVILLILRYQQ 331 (499)
Q Consensus 316 ~~~~~~~~~~~~~~~~ 331 (499)
.++++++.+.++++.|
T Consensus 20 v~~v~ii~~~~~~~~R 35 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVR 35 (44)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3333333344344433
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=85.79 E-value=1.4 Score=40.37 Aligned_cols=53 Identities=15% Similarity=0.079 Sum_probs=42.1
Q ss_pred cccccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC
Q 010856 363 FSENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR 415 (499)
Q Consensus 363 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~ 415 (499)
..-...+|.|..+.||+.+..+|+.|.+|+-..........|.+|.+.|+.+.
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG 69 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence 44456789999999999999999999999876544444457889999988763
No 431
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=85.61 E-value=0.67 Score=41.98 Aligned_cols=71 Identities=14% Similarity=0.014 Sum_probs=44.6
Q ss_pred cccCCcc-eEEEEEeC-CCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-CCCccccceeEEccccceeeeeecccCCC
Q 010856 369 IGKGGFG-SVYKARLG-DRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-HRNLIKILHGVAVITFTVCLCLFHHSSAS 444 (499)
Q Consensus 369 lg~G~~g-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-H~niv~l~~~~~~~~~~~~~~l~~~~~~~ 444 (499)
+..|..+ .||+.... ++..+.+|+-... ....+.+|.++++.+. +--+.++++++...+ ..+++++++.|.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~l~G~ 105 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTTAIPGK 105 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCCSE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEEeeCCc
Confidence 4445555 68987754 5677889986543 3456889999988763 223556666665432 334567777664
No 432
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=85.59 E-value=1 Score=42.95 Aligned_cols=99 Identities=7% Similarity=0.031 Sum_probs=61.2
Q ss_pred cccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCC--ccccceeEEccccceeeeeecccC
Q 010856 365 ENNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRN--LIKILHGVAVITFTVCLCLFHHSS 442 (499)
Q Consensus 365 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~n--iv~l~~~~~~~~~~~~~~l~~~~~ 442 (499)
..+.++.|....+|+... ++..+++|..... ..+.+|..++..+.... +.++++++...+ ...+.+++++.
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~~~lv~e~l~ 117 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SCEEEEEECCC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CCeEEEEEecC
Confidence 346688999999999876 5778889877432 35889999988876543 345555544432 23445788888
Q ss_pred CCccccccccccccccccccccccceeecc
Q 010856 443 ASASASLVSSLTLSRPAKGGGFRGCVLWHV 472 (499)
Q Consensus 443 ~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~ 472 (499)
|.....+. ......++.++++.|+-||+
T Consensus 118 G~~l~~l~--~~~~~~~~~~lg~~La~LH~ 145 (362)
T 3ovc_A 118 GVTLQDLP--ETELPAVLQPVAEAMDAIAA 145 (362)
T ss_dssp SEETTTSC--GGGSGGGHHHHHHHHHHHHH
T ss_pred CCCcccCC--HHHHHHHHHHHHHHHHHHhc
Confidence 76544321 11122333455555555555
No 433
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=83.66 E-value=0.56 Score=45.38 Aligned_cols=74 Identities=9% Similarity=0.111 Sum_probs=45.1
Q ss_pred ccccccCCcceEEEEEeC-CCCEEEEEEeeccCC-------ccHHHHHHHHHHHhcCCC--CC-ccccceeEEcccccee
Q 010856 366 NNLIGKGGFGSVYKARLG-DRMEVAVKVFNLQCG-------RAFESFDVECEMMKNIRH--RN-LIKILHGVAVITFTVC 434 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~il~~l~H--~n-iv~l~~~~~~~~~~~~ 434 (499)
.+.+|.|.++.||++... +++.+++|....... ...+++.+|.++++.+.. |. +.+++.+ ..+ ..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~--~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE--MA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT--TT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC--cc
Confidence 457899999999999753 467899998653211 123567889998887632 33 3344432 222 23
Q ss_pred eeeecccCC
Q 010856 435 LCLFHHSSA 443 (499)
Q Consensus 435 ~~l~~~~~~ 443 (499)
+++++++.|
T Consensus 111 ~lvmE~l~g 119 (397)
T 2olc_A 111 VTVMEDLSH 119 (397)
T ss_dssp EEEECCCTT
T ss_pred EEEEEeCCC
Confidence 456777765
No 434
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=82.16 E-value=1.6 Score=40.60 Aligned_cols=95 Identities=11% Similarity=-0.015 Sum_probs=65.2
Q ss_pred ccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC---CCCccccceeEEccccceeeeeecccC
Q 010856 366 NNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR---HRNLIKILHGVAVITFTVCLCLFHHSS 442 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---H~niv~l~~~~~~~~~~~~~~l~~~~~ 442 (499)
.+.++.|.+..+|+... ++..+.+|+.... ....+.+|.+.++.+. ..-+.+.+++.... ...+.+++++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--CceEEEEEecc
Confidence 45689999999999886 4668888987643 3567889999888773 24567777665442 23456788887
Q ss_pred CCccccccccccccccccccccccceeeccCCC
Q 010856 443 ASASASLVSSLTLSRPAKGGGFRGCVLWHVGVD 475 (499)
Q Consensus 443 ~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~~~~ 475 (499)
|.... ...+.+++++|+-||+...
T Consensus 115 G~~~~---------~~~~~~lG~~LA~LH~~~~ 138 (312)
T 3jr1_A 115 KSKNK---------QSSFTIFAEKIAQLHQIQG 138 (312)
T ss_dssp CCCCC---------TTHHHHHHHHHHHHHHCCC
T ss_pred CCCCC---------chhHHHHHHHHHHHHcCCC
Confidence 76321 1234567788889998543
No 435
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=81.45 E-value=4.2 Score=30.46 Aligned_cols=48 Identities=15% Similarity=-0.022 Sum_probs=31.1
Q ss_pred CCCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCCeEecccc
Q 010856 41 CNISGGIPEEISNLTNSTIVNLGGNKLNGSIPITLSKLQKLQGLGLEDN 89 (499)
Q Consensus 41 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 89 (499)
..++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455555667777777777777654 44466666777777777776553
No 436
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.90 E-value=0.93 Score=27.97 Aligned_cols=7 Identities=14% Similarity=0.316 Sum_probs=2.8
Q ss_pred HHhhhcC
Q 010856 327 LRYQQRG 333 (499)
Q Consensus 327 ~~~~~~~ 333 (499)
++.+||+
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3344443
No 437
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=69.02 E-value=13 Score=27.72 Aligned_cols=48 Identities=13% Similarity=0.088 Sum_probs=31.8
Q ss_pred CcCCccCCccccCCCCCCeEecccccccccCCccccCcccccEEeeecC
Q 010856 65 NKLNGSIPITLSKLQKLQGLGLEDNKLEGSIPDDICHLAELYRLDLDGN 113 (499)
Q Consensus 65 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 113 (499)
..++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 4455566667777777777777654 44455566777777777777654
No 438
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=68.19 E-value=0.92 Score=43.03 Aligned_cols=82 Identities=6% Similarity=-0.058 Sum_probs=50.5
Q ss_pred cccc-ccCCcceEEEEEeC-------CCCEEEEEEeeccC---CccHHHHHHHHHHHhcCC-C--CCccccceeEEcccc
Q 010856 366 NNLI-GKGGFGSVYKARLG-------DRMEVAVKVFNLQC---GRAFESFDVECEMMKNIR-H--RNLIKILHGVAVITF 431 (499)
Q Consensus 366 ~~~l-g~G~~g~v~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~-H--~niv~l~~~~~~~~~ 431 (499)
.+.+ +.|....+|+.... ++..+++|+..... ......+.+|.++++.+. + -.+.++++++...+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3556 88889999988753 25678888765432 111245788999888774 2 245666665543211
Q ss_pred -ceeeeeecccCCCccc
Q 010856 432 -TVCLCLFHHSSASASA 447 (499)
Q Consensus 432 -~~~~~l~~~~~~~~~~ 447 (499)
...+.+++++.|....
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 1223578888776543
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=57.78 E-value=7.5 Score=37.88 Aligned_cols=96 Identities=13% Similarity=0.008 Sum_probs=59.3
Q ss_pred cccccCCcceEEEEEeCC--------CCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCc-cccceeEEccccceeeee
Q 010856 367 NLIGKGGFGSVYKARLGD--------RMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNL-IKILHGVAVITFTVCLCL 437 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~~~~~~~~~~~~~~l 437 (499)
+.++.|....+|++..++ +..+.+|+.... ...+.+.+|.++++.+...++ .++++.+. .+.+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~------~g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS------GGRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET------TEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC------CCEE
Confidence 567888889999998653 468889887431 112556689999887743344 45554332 2367
Q ss_pred ecccCCCccccccccccccccccccccccceeeccC
Q 010856 438 FHHSSASASASLVSSLTLSRPAKGGGFRGCVLWHVG 473 (499)
Q Consensus 438 ~~~~~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~~ 473 (499)
++++.|..... ........+.++++.|+-||+.
T Consensus 151 ~e~l~G~~l~~---~~l~~~~~~~~ia~~La~LH~~ 183 (429)
T 1nw1_A 151 EEYIPSRPLSC---HEISLAHMSTKIAKRVAKVHQL 183 (429)
T ss_dssp ECCCCEEECCT---TGGGSHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCcccCh---hhcCCHHHHHHHHHHHHHHhCC
Confidence 88887643221 1111122346778888888873
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=57.21 E-value=8.7 Score=37.77 Aligned_cols=98 Identities=10% Similarity=-0.035 Sum_probs=58.3
Q ss_pred cccccCCcceEEEEEeCC-CCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCc-cccceeEEccccceeeeeecccCCC
Q 010856 367 NLIGKGGFGSVYKARLGD-RMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNL-IKILHGVAVITFTVCLCLFHHSSAS 444 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~~~~~~~~~~~~~~l~~~~~~~ 444 (499)
+.++.|-...+|++...+ +..+.+|+........ -...+|.++++.+...++ .++++++ . .+.+++++.|.
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-~-----~G~v~e~I~G~ 186 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-T-----NGRIEEFMDGY 186 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-T-----TEEEEECCCSE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-C-----CeEEEEeeCCc
Confidence 567888889999998755 4678888875432111 112588888888765555 4555443 1 23488888875
Q ss_pred ccccccccccccccccccccccceeeccCC
Q 010856 445 ASASLVSSLTLSRPAKGGGFRGCVLWHVGV 474 (499)
Q Consensus 445 ~~~~l~~~~~~~~~~~~~i~~gl~yLH~~~ 474 (499)
.... ..........++++.|+-||+..
T Consensus 187 ~l~~---~~l~~~~~~~~ia~~La~LH~~~ 213 (458)
T 2qg7_A 187 ALSR---EDIKNPKFQKLIAKNLKLLHDIK 213 (458)
T ss_dssp ECCT---TTTTSHHHHHHHHHHHHHHHTCC
T ss_pred cCCh---hhcCCHHHHHHHHHHHHHHhcCC
Confidence 3221 11111233467788899999743
No 441
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=54.62 E-value=7 Score=23.27 Aligned_cols=8 Identities=0% Similarity=0.094 Sum_probs=3.3
Q ss_pred eeccchhh
Q 010856 310 IVLPLSTT 317 (499)
Q Consensus 310 i~~~~~~~ 317 (499)
++++++.+
T Consensus 14 AGiVvG~v 21 (38)
T 2k1k_A 14 VAVIFGLL 21 (38)
T ss_dssp HHHHHHHH
T ss_pred eeeehHHH
Confidence 44444443
No 442
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=53.30 E-value=6.5 Score=36.56 Aligned_cols=73 Identities=7% Similarity=0.002 Sum_probs=37.8
Q ss_pred cccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC-----CCCccccc-e-eEEccccceeeeeec
Q 010856 367 NLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR-----HRNLIKIL-H-GVAVITFTVCLCLFH 439 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----H~niv~l~-~-~~~~~~~~~~~~l~~ 439 (499)
..++.|..+.||+....+| .+++|+.... ...+..|.+++..+. .|.++.-. | .+.. .....+.+++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~-~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK-HGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEE-ETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEE-ECCEEEEEEE
Confidence 3456677899999987555 5889988652 234445565555442 34443311 1 1111 1223456788
Q ss_pred ccCCCc
Q 010856 440 HSSASA 445 (499)
Q Consensus 440 ~~~~~~ 445 (499)
++.|..
T Consensus 112 ~i~G~~ 117 (346)
T 2q83_A 112 WIEGRP 117 (346)
T ss_dssp CCCCBC
T ss_pred eecCcc
Confidence 887754
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=48.81 E-value=13 Score=35.37 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=54.4
Q ss_pred cccccCCcceEEEEEeC--------CCCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCc-cccceeEEccccceeeee
Q 010856 367 NLIGKGGFGSVYKARLG--------DRMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNL-IKILHGVAVITFTVCLCL 437 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~~~~~~~~~~~~~~l 437 (499)
+.+..|....+|++..+ +++.|.+|+.... ......+.+|.++++.+.-..+ .++++++. + +.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C----ccE
Confidence 45667888889999864 2468888886332 2345667799999887743233 45554332 1 367
Q ss_pred ecccCCCccccccccccccccccccccccceeeccC
Q 010856 438 FHHSSASASASLVSSLTLSRPAKGGGFRGCVLWHVG 473 (499)
Q Consensus 438 ~~~~~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~~ 473 (499)
++++.|..... ..-....+..++++.|+-||+.
T Consensus 129 ~e~i~G~~l~~---~~l~~p~~~~~ia~~La~LH~~ 161 (379)
T 3feg_A 129 EQYIPSRPLKT---QELREPVLSAAIATKMAQFHGM 161 (379)
T ss_dssp EECCSEEECCG---GGGGCHHHHHHHHHHHHHHHTC
T ss_pred EEEecCccCCh---hHhCCHHHHHHHHHHHHHHhCC
Confidence 88888754321 1111122345678888888873
No 444
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=47.65 E-value=4.9 Score=37.43 Aligned_cols=31 Identities=13% Similarity=-0.096 Sum_probs=26.6
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
....+|.|..|.|++++.++.+.+|||+...
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 3567999999999999888899999998653
No 445
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=46.19 E-value=11 Score=34.66 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=36.4
Q ss_pred cCHHHHHHHhhhccc-----ccccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcCC
Q 010856 351 FSYLELFRATDEFSE-----NNLIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNIR 415 (499)
Q Consensus 351 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~ 415 (499)
++.+++......|.. .+.++.|....+|+....+| .+++|+..... ..+.+..|.+++..+.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~ 73 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLA 73 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHH
Confidence 445555555555654 24467788889999987666 57888886531 2245667887776653
No 446
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=43.45 E-value=7.5 Score=37.67 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=24.6
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
....+|.|.+|.|+++..+ ++.+|||++..
T Consensus 231 ~~~liHGDl~~~Nil~~~~-~~~lID~e~a~ 260 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQD-STQVIDPEFSF 260 (420)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred CCeEEecCCCCCcEEEeCC-CCEEEeCcccc
Confidence 4567999999999999655 49999997654
No 447
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=36.14 E-value=9.4 Score=35.47 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=25.1
Q ss_pred ceeeccCCCcccEEEeeC----CCeEEEEEEEee
Q 010856 467 CVLWHVGVDFAAFVFVLE----PGVEVICFVFEI 496 (499)
Q Consensus 467 l~yLH~~~~p~~~l~~~~----~~~~~~~f~~~~ 496 (499)
-..+|.|..|.|+++..+ +.+.+|||+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 468999999999999764 678999997654
No 448
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=35.90 E-value=9.1 Score=35.27 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=23.4
Q ss_pred ceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 467 CVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 467 l~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
...+|.|..|.|++++++.-+.+|||+...
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 356999999999999765444799997653
No 449
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=33.32 E-value=17 Score=35.27 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=24.8
Q ss_pred ccceeeccCCCcccEEEeeC----------------------------CCeEEEEEEEe
Q 010856 465 RGCVLWHVGVDFAAFVFVLE----------------------------PGVEVICFVFE 495 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~~~----------------------------~~~~~~~f~~~ 495 (499)
....++|.|..|.|+|+..+ +.+.+|||..+
T Consensus 247 ~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya 305 (429)
T 1nw1_A 247 SPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYA 305 (429)
T ss_dssp CCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTC
T ss_pred CCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccC
Confidence 45678999999999999875 68999999654
No 450
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=33.04 E-value=19 Score=32.72 Aligned_cols=29 Identities=7% Similarity=0.044 Sum_probs=24.4
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEe
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
....+|.|..|.|++ ..++++.+|||..+
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a 200 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYS 200 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTC
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccc
Confidence 455899999999999 67788999999654
No 451
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=30.58 E-value=21 Score=34.96 Aligned_cols=18 Identities=17% Similarity=0.121 Sum_probs=16.1
Q ss_pred ccceeeccCCCcccEEEe
Q 010856 465 RGCVLWHVGVDFAAFVFV 482 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~ 482 (499)
....++|.|..|.|+|+.
T Consensus 288 ~~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 288 SPIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CCEEEECSCCCGGGEEEC
T ss_pred CCeeEEecCCCCCcEEee
Confidence 457899999999999997
No 452
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=30.10 E-value=13 Score=35.15 Aligned_cols=30 Identities=13% Similarity=-0.073 Sum_probs=24.2
Q ss_pred ceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 467 CVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 467 l~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
...+|.|..|.|++++++..+.+|||+...
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~ 242 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAM 242 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccc
Confidence 467999999999999655556799998654
No 453
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=30.08 E-value=17 Score=34.02 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=26.2
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
....+|.+..|.|+++..++.+.+|||....
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 4568999999999999877889999996543
No 454
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=28.54 E-value=16 Score=34.50 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=40.0
Q ss_pred cccccCCcceEEEEEeCC---------CCEEEEEEeeccCCccHHHHHHHHHHHhcCCCCCc-cccceeEEccccceeee
Q 010856 367 NLIGKGGFGSVYKARLGD---------RMEVAVKVFNLQCGRAFESFDVECEMMKNIRHRNL-IKILHGVAVITFTVCLC 436 (499)
Q Consensus 367 ~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~H~ni-v~l~~~~~~~~~~~~~~ 436 (499)
..++.|....+|+....+ +..+.+|+...... ......+|.++++.+....+ .++++.. ..+.
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~------~~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF------NGGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE------TTEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec------CCcE
Confidence 457788888999998643 26788887654321 11123578888877643333 3555332 1345
Q ss_pred eecccCCC
Q 010856 437 LFHHSSAS 444 (499)
Q Consensus 437 l~~~~~~~ 444 (499)
+++++.|.
T Consensus 112 v~e~i~G~ 119 (369)
T 3c5i_A 112 IEEWLYGD 119 (369)
T ss_dssp EEECCCSE
T ss_pred EEEEecCC
Confidence 78888765
No 455
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=27.39 E-value=16 Score=34.29 Aligned_cols=31 Identities=13% Similarity=0.015 Sum_probs=24.1
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEee
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFEI 496 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~~ 496 (499)
....+|.|..|.|++++++.-+.+|||..+.
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 3567999999999999842236899997654
No 456
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=27.16 E-value=37 Score=32.84 Aligned_cols=97 Identities=8% Similarity=-0.010 Sum_probs=0.0
Q ss_pred ccccccCCcceEEEEEeCC--------CCEEEEEEeeccCCccHHHHHHHHHHHhcC-CCCCccccceeEEccccceeee
Q 010856 366 NNLIGKGGFGSVYKARLGD--------RMEVAVKVFNLQCGRAFESFDVECEMMKNI-RHRNLIKILHGVAVITFTVCLC 436 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~H~niv~l~~~~~~~~~~~~~~ 436 (499)
.+.+..|-...+|+....+ +..|.+|+ ........-+..+|.++++.+ .+.-..++++.+.. +.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi-~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~~------~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRI-YGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFPE------GR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEE-CCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEETT------EE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEE-CCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcCC------CE
Q ss_pred eecccCCCccccccccccccccccccccccceeecc
Q 010856 437 LFHHSSASASASLVSSLTLSRPAKGGGFRGCVLWHV 472 (499)
Q Consensus 437 l~~~~~~~~~~~l~~~~~~~~~~~~~i~~gl~yLH~ 472 (499)
+++++.| ..+.........+..++++.|+-||+
T Consensus 148 I~efI~G---~~l~~~~l~~~~~~~~ia~~La~LH~ 180 (424)
T 3mes_A 148 IEEFIDG---EPLTTKQLQLTHICVEVAKNMGSLHI 180 (424)
T ss_dssp EEECCCS---EECCTGGGGSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCC---ccCChhhcCCHHHHHHHHHHHHHHhc
No 457
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=26.71 E-value=25 Score=32.27 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=29.3
Q ss_pred ccccCCcceEEEEEeCCCCEEEEEEeeccCCccHHHHHHHHHHHhcC
Q 010856 368 LIGKGGFGSVYKARLGDRMEVAVKVFNLQCGRAFESFDVECEMMKNI 414 (499)
Q Consensus 368 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l 414 (499)
.++ |....||+....+|+.+++|...... ...+.+..|.+++..+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L 77 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQL 77 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHH
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHH
Confidence 355 77778888776667678888876432 1345566777776655
No 458
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=26.02 E-value=30 Score=33.21 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=25.8
Q ss_pred ccceeeccCCCcccEEEeeC------CCeEEEEEEEe
Q 010856 465 RGCVLWHVGVDFAAFVFVLE------PGVEVICFVFE 495 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~~~------~~~~~~~f~~~ 495 (499)
....++|.|..|.|+++..+ +.+.+|||-.+
T Consensus 242 ~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 242 SPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp CCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred CCeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 44678999999999999876 68999999543
No 459
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=25.32 E-value=29 Score=33.39 Aligned_cols=103 Identities=9% Similarity=-0.110 Sum_probs=52.7
Q ss_pred ccccccCCcceEEEEEeCCCCEEEEEEeeccC----C-----ccHHHHHHHHHHHh-cCCCCCccccceeEEccccceee
Q 010856 366 NNLIGKGGFGSVYKARLGDRMEVAVKVFNLQC----G-----RAFESFDVECEMMK-NIRHRNLIKILHGVAVITFTVCL 435 (499)
Q Consensus 366 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~-----~~~~~~~~E~~il~-~l~H~niv~l~~~~~~~~~~~~~ 435 (499)
.+.+|.|..+.||++.. ++..+.+|...... . .....+..|+..+. ...+..+.+++++. . ...+
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~-~---~~~~ 113 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD-R---TMAL 113 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE-T---TTTE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC-C---CccE
Confidence 45689999999999965 56789999432210 0 12233444443322 22233455655443 1 2235
Q ss_pred eeeccc-CCCc-cccccccccccccccccccccceeeccC
Q 010856 436 CLFHHS-SASA-SASLVSSLTLSRPAKGGGFRGCVLWHVG 473 (499)
Q Consensus 436 ~l~~~~-~~~~-~~~l~~~~~~~~~~~~~i~~gl~yLH~~ 473 (499)
.+++++ .|.. ..............+.++++.|+-+|..
T Consensus 114 lv~e~l~~g~~~l~~~l~~~~~~~~~~~~lg~~La~lH~~ 153 (420)
T 2pyw_A 114 IGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFF 153 (420)
T ss_dssp EEECCCCTTCEEHHHHHHHTCCCTTHHHHHHHHHHHHHHT
T ss_pred EEEeecCCcchhHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 678888 7621 1000000111123345667777777853
No 460
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=24.25 E-value=30 Score=32.52 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=23.5
Q ss_pred ccceeeccCCCcccEEEeeCCCeEEEEEEEe
Q 010856 465 RGCVLWHVGVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
.....+|.|..|.|++++ ++++.+|||..+
T Consensus 210 ~~~~l~HgDl~~~Nil~~-~~~~~lID~e~a 239 (369)
T 3c5i_A 210 NTIVFCHNDLQENNIINT-NKCLRLIDFEYS 239 (369)
T ss_dssp GCEEEECSCCCGGGEEEC-C-CEEECCCTTC
T ss_pred CCeEEEeCCCCcccEEec-CCcEEEEEecCC
Confidence 345689999999999985 456999999644
No 461
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=23.80 E-value=36 Score=32.30 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=26.1
Q ss_pred ccceeeccCCCcccEEEeeC----CCeEEEEEEEe
Q 010856 465 RGCVLWHVGVDFAAFVFVLE----PGVEVICFVFE 495 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~~~----~~~~~~~f~~~ 495 (499)
.....+|.|..+.|+++..+ +.+.+|||-.+
T Consensus 218 ~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 218 SPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp CCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred CCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 45678999999999999876 68999999654
No 462
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=23.03 E-value=35 Score=32.61 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=24.2
Q ss_pred ccceeeccCCCcccEEEe------eCCCeEEEEEEE
Q 010856 465 RGCVLWHVGVDFAAFVFV------LEPGVEVICFVF 494 (499)
Q Consensus 465 ~gl~yLH~~~~p~~~l~~------~~~~~~~~~f~~ 494 (499)
..+.++|.|..+.|+|+. .+..+.+|||=+
T Consensus 242 ~~~vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEy 277 (401)
T 3g15_A 242 SPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEY 277 (401)
T ss_dssp CCEEEECSCCCGGGEEEETTGGGCSSCCEEECCCTT
T ss_pred CCeeeEEecCCCCeEEEecCcccCcCCeEEEechHh
Confidence 457789999999999993 356789999843
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.76 E-value=66 Score=20.76 Aligned_cols=14 Identities=14% Similarity=0.150 Sum_probs=5.8
Q ss_pred cceeeeccchhhhH
Q 010856 306 LLLRIVLPLSTTFM 319 (499)
Q Consensus 306 ~~~~i~~~~~~~~~ 319 (499)
.+++++.+++++.+
T Consensus 12 ~wiIi~svl~GLll 25 (54)
T 2knc_A 12 IWWVLVGVLGGLLL 25 (54)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 34444444444333
No 464
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=20.18 E-value=1.6e+02 Score=26.67 Aligned_cols=28 Identities=7% Similarity=0.043 Sum_probs=23.4
Q ss_pred cceeeccCCCcccEEEeeCCCeEEEEEEEe
Q 010856 466 GCVLWHVGVDFAAFVFVLEPGVEVICFVFE 495 (499)
Q Consensus 466 gl~yLH~~~~p~~~l~~~~~~~~~~~f~~~ 495 (499)
....+|.|.+|.|++++ + ++.+|||...
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a 221 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDA 221 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTC
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCC
Confidence 34578999999999998 4 9999999654
Done!