Query 010860
Match_columns 499
No_of_seqs 368 out of 2844
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:23:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010860.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010860hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02177 glycerol-3-phosphate 100.0 4.9E-97 1E-101 777.1 51.0 490 6-498 6-497 (497)
2 PLN02499 glycerol-3-phosphate 100.0 3.1E-87 6.6E-92 685.7 47.8 480 14-497 2-483 (498)
3 PLN02588 glycerol-3-phosphate 100.0 3.6E-78 7.8E-83 615.9 42.7 464 15-492 45-523 (525)
4 TIGR01545 YfhB_g-proteo haloac 100.0 2E-34 4.3E-39 274.0 20.1 191 19-222 4-210 (210)
5 KOG2848 1-acyl-sn-glycerol-3-p 100.0 3E-31 6.5E-36 247.1 16.6 176 272-470 63-257 (276)
6 PRK11590 hypothetical protein; 100.0 1.8E-30 3.9E-35 247.7 17.4 191 18-220 4-209 (211)
7 TIGR01490 HAD-SF-IB-hyp1 HAD-s 100.0 1.5E-29 3.3E-34 239.3 19.6 193 22-218 1-202 (202)
8 cd07991 LPLAT_LPCAT1-like Lyso 100.0 4.1E-30 9E-35 245.1 11.3 189 278-481 4-211 (211)
9 COG0560 SerB Phosphoserine pho 100.0 1.4E-28 3E-33 233.6 14.6 192 18-229 3-202 (212)
10 PLN02833 glycerol acyltransfer 100.0 9.3E-28 2E-32 244.5 20.5 191 274-475 140-344 (376)
11 PRK15018 1-acyl-sn-glycerol-3- 100.0 2.2E-27 4.7E-32 230.3 21.7 171 274-469 41-230 (245)
12 PTZ00261 acyltransferase; Prov 99.9 2.1E-22 4.7E-27 200.3 17.9 152 300-469 128-308 (355)
13 PLN02901 1-acyl-sn-glycerol-3- 99.9 5.7E-22 1.2E-26 189.3 17.3 163 281-470 32-212 (214)
14 cd07992 LPLAT_AAK14816-like Ly 99.9 1.4E-21 3.1E-26 185.2 15.9 171 273-468 3-202 (203)
15 cd07986 LPLAT_ACT14924-like Ly 99.8 1.1E-20 2.4E-25 180.0 13.1 171 284-463 8-208 (210)
16 PRK06814 acylglycerophosphoeth 99.8 7.8E-20 1.7E-24 214.8 21.3 171 282-467 437-622 (1140)
17 TIGR02137 HSK-PSP phosphoserin 99.8 6.6E-20 1.4E-24 173.3 16.0 172 20-220 1-177 (203)
18 cd07988 LPLAT_ABO13168-like Ly 99.8 1.9E-20 4.2E-25 171.0 11.9 140 276-462 2-160 (163)
19 COG0204 PlsC 1-acyl-sn-glycero 99.8 1.1E-19 2.3E-24 177.8 15.7 149 274-444 40-206 (255)
20 PRK08043 bifunctional acyl-[ac 99.8 1.5E-19 3.2E-24 202.8 18.0 175 284-470 14-199 (718)
21 PLN02783 diacylglycerol O-acyl 99.8 1.3E-19 2.9E-24 181.7 13.6 176 274-467 77-297 (315)
22 PRK08633 2-acyl-glycerophospho 99.8 2.1E-18 4.5E-23 202.7 22.5 163 281-464 424-603 (1146)
23 TIGR01488 HAD-SF-IB Haloacid D 99.8 1.9E-18 4E-23 159.7 13.2 169 22-206 1-177 (177)
24 cd07993 LPLAT_DHAPAT-like Lyso 99.8 1.1E-19 2.3E-24 172.6 4.1 142 300-444 21-202 (205)
25 cd07987 LPLAT_MGAT-like Lysoph 99.8 1.6E-18 3.4E-23 165.5 10.9 172 284-468 5-207 (212)
26 cd06551 LPLAT Lysophospholipid 99.8 3.4E-17 7.4E-22 152.7 17.0 162 281-468 9-186 (187)
27 PRK14014 putative acyltransfer 99.7 1.1E-16 2.4E-21 159.9 20.0 121 280-405 69-232 (301)
28 PRK11133 serB phosphoserine ph 99.7 5.8E-17 1.3E-21 163.3 15.7 185 18-223 108-300 (322)
29 PRK08238 hypothetical protein; 99.7 2E-17 4.3E-22 174.7 12.4 171 20-233 10-185 (479)
30 PF12710 HAD: haloacid dehalog 99.7 6.7E-17 1.5E-21 151.1 12.7 115 83-204 64-192 (192)
31 cd07985 LPLAT_GPAT Lysophospho 99.7 1.7E-16 3.6E-21 150.2 13.1 165 292-469 16-233 (235)
32 PRK03355 glycerol-3-phosphate 99.7 5.4E-17 1.2E-21 177.7 11.2 192 275-467 239-482 (783)
33 TIGR00530 AGP_acyltrn 1-acyl-s 99.7 1.1E-16 2.5E-21 140.0 10.8 116 283-402 1-130 (130)
34 cd07983 LPLAT_DUF374-like Lyso 99.7 2.1E-16 4.5E-21 148.1 12.9 169 281-468 5-187 (189)
35 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 1.8E-15 4E-20 142.5 15.9 185 19-223 3-199 (201)
36 PF01553 Acyltransferase: Acyl 99.7 1.1E-17 2.4E-22 146.8 0.4 115 285-402 1-132 (132)
37 TIGR00338 serB phosphoserine p 99.7 2E-15 4.3E-20 144.6 14.9 183 19-222 13-203 (219)
38 TIGR03703 plsB glycerol-3-phos 99.6 2.9E-15 6.2E-20 165.6 12.2 160 285-445 275-472 (799)
39 PRK04974 glycerol-3-phosphate 99.6 9.4E-15 2E-19 161.7 12.8 159 285-445 285-482 (818)
40 TIGR03333 salvage_mtnX 2-hydro 99.6 4.7E-14 1E-18 134.8 14.0 170 23-213 2-182 (214)
41 cd07989 LPLAT_AGPAT-like Lysop 99.5 3.6E-14 7.8E-19 131.9 11.3 147 282-444 8-168 (184)
42 PLN02510 probable 1-acyl-sn-gl 99.5 8.2E-14 1.8E-18 142.4 13.5 117 281-402 76-209 (374)
43 cd07990 LPLAT_LCLAT1-like Lyso 99.5 2.3E-14 5E-19 134.8 7.4 116 281-400 7-139 (193)
44 PTZ00374 dihydroxyacetone phos 99.4 2.4E-13 5.1E-18 149.0 10.0 144 300-445 628-813 (1108)
45 PLN02954 phosphoserine phospha 99.4 1.9E-12 4E-17 124.4 15.3 103 108-212 84-194 (224)
46 PRK11915 glycerol-3-phosphate 99.4 1.2E-13 2.6E-18 147.2 6.4 187 280-467 94-325 (621)
47 PLN02380 1-acyl-sn-glycerol-3- 99.4 5.8E-13 1.3E-17 136.1 10.5 102 280-382 63-181 (376)
48 smart00563 PlsC Phosphate acyl 99.4 1.2E-12 2.6E-17 111.9 8.0 101 303-403 1-117 (118)
49 PRK09552 mtnX 2-hydroxy-3-keto 99.4 9.5E-12 2.1E-16 119.3 14.2 96 112-211 81-184 (219)
50 cd07984 LPLAT_LABLAT-like Lyso 99.4 4.5E-12 9.7E-17 118.7 11.7 155 285-470 3-179 (192)
51 PRK13582 thrH phosphoserine ph 99.3 1.9E-11 4E-16 115.8 15.1 119 85-216 52-173 (205)
52 KOG1615 Phosphoserine phosphat 99.3 3.2E-11 6.9E-16 109.0 11.7 168 19-205 15-191 (227)
53 TIGR01489 DKMTPPase-SF 2,3-dik 99.2 3E-10 6.5E-15 105.6 16.7 117 86-211 57-186 (188)
54 KOG2898 Predicted phosphate ac 99.0 6.8E-10 1.5E-14 111.1 7.6 186 282-480 122-324 (354)
55 KOG4666 Predicted phosphate ac 99.0 3.1E-10 6.7E-15 109.6 3.5 175 303-485 8-196 (412)
56 TIGR01544 HAD-SF-IE haloacid d 98.8 5.3E-08 1.1E-12 95.5 13.7 118 83-206 99-230 (277)
57 TIGR01449 PGP_bact 2-phosphogl 98.8 2.4E-08 5.1E-13 94.9 10.9 109 88-211 60-182 (213)
58 KOG2847 Phosphate acyltransfer 98.8 7.7E-09 1.7E-13 97.0 6.9 150 285-444 49-226 (286)
59 PRK10826 2-deoxyglucose-6-phos 98.8 6.9E-08 1.5E-12 92.6 12.9 97 109-216 93-194 (222)
60 PRK13222 phosphoglycolate phos 98.8 7.9E-08 1.7E-12 92.1 12.6 110 87-212 67-191 (226)
61 cd01427 HAD_like Haloacid deha 98.7 3.2E-08 7E-13 85.8 7.0 95 113-209 32-135 (139)
62 PF06888 Put_Phosphatase: Puta 98.7 4.8E-07 1E-11 86.9 15.0 177 22-216 2-198 (234)
63 PRK13223 phosphoglycolate phos 98.7 2.3E-07 5.1E-12 91.9 12.3 112 87-209 76-196 (272)
64 KOG3120 Predicted haloacid deh 98.6 1.9E-06 4.1E-11 80.0 14.3 171 17-211 10-207 (256)
65 PRK13226 phosphoglycolate phos 98.5 1.3E-06 2.8E-11 84.4 13.9 92 109-211 96-192 (229)
66 TIGR03351 PhnX-like phosphonat 98.5 2.2E-06 4.7E-11 82.0 13.9 109 87-210 60-186 (220)
67 TIGR01422 phosphonatase phosph 98.5 5E-06 1.1E-10 81.4 15.6 109 88-211 74-198 (253)
68 PRK13288 pyrophosphatase PpaX; 98.5 2.1E-06 4.5E-11 81.8 12.4 92 109-211 83-179 (214)
69 TIGR02009 PGMB-YQAB-SF beta-ph 98.4 2.8E-06 6.1E-11 78.7 12.5 107 87-210 61-182 (185)
70 COG4359 Uncharacterized conser 98.4 5E-06 1.1E-10 75.0 13.1 99 111-211 79-183 (220)
71 TIGR02253 CTE7 HAD superfamily 98.4 7.2E-06 1.6E-10 78.3 15.0 91 109-214 95-196 (221)
72 TIGR01428 HAD_type_II 2-haloal 98.4 4.4E-06 9.6E-11 78.5 12.4 88 112-214 99-193 (198)
73 KOG1505 Lysophosphatidic acid 98.4 1.6E-06 3.5E-11 87.9 9.7 77 300-376 70-162 (346)
74 TIGR01672 AphA HAD superfamily 98.3 2.3E-06 5E-11 82.7 8.5 103 111-230 120-231 (237)
75 PRK13478 phosphonoacetaldehyde 98.3 2.2E-05 4.7E-10 77.6 15.3 108 89-211 77-200 (267)
76 PRK06698 bifunctional 5'-methy 98.3 3.3E-06 7.2E-11 90.1 10.0 91 109-212 331-425 (459)
77 COG0546 Gph Predicted phosphat 98.3 1.3E-05 2.7E-10 77.0 12.7 87 112-209 96-184 (220)
78 PRK13225 phosphoglycolate phos 98.2 1.5E-05 3.2E-10 79.1 13.1 89 109-211 143-236 (273)
79 PRK11587 putative phosphatase; 98.2 2.1E-05 4.6E-10 75.2 13.5 91 109-214 84-183 (218)
80 PLN02770 haloacid dehalogenase 98.2 1.6E-05 3.4E-10 77.7 12.8 84 113-211 116-205 (248)
81 TIGR01454 AHBA_synth_RP 3-amin 98.2 5E-06 1.1E-10 78.6 8.9 92 109-211 76-172 (205)
82 TIGR01548 HAD-SF-IA-hyp1 haloa 98.2 2.5E-05 5.4E-10 73.4 13.6 81 111-203 112-194 (197)
83 PRK10725 fructose-1-P/6-phosph 98.2 3E-05 6.5E-10 72.0 13.9 81 115-211 97-183 (188)
84 TIGR02254 YjjG/YfnB HAD superf 98.2 4E-05 8.7E-10 73.1 14.9 92 108-214 97-199 (224)
85 PF00702 Hydrolase: haloacid d 98.2 5.7E-06 1.2E-10 78.2 8.3 81 109-207 128-215 (215)
86 TIGR01990 bPGM beta-phosphoglu 98.2 2.2E-05 4.7E-10 72.7 11.8 107 88-211 60-182 (185)
87 TIGR01509 HAD-SF-IA-v3 haloaci 98.2 1.8E-05 3.8E-10 72.9 11.0 85 109-209 86-179 (183)
88 PLN02575 haloacid dehalogenase 98.1 3E-05 6.4E-10 79.8 13.1 89 109-212 217-314 (381)
89 PLN03243 haloacid dehalogenase 98.1 2.2E-05 4.7E-10 77.3 11.6 88 109-211 110-206 (260)
90 TIGR02252 DREG-2 REG-2-like, H 98.1 9.4E-05 2E-09 69.7 14.6 104 90-209 84-200 (203)
91 TIGR01497 kdpB K+-transporting 98.0 1.2E-05 2.5E-10 88.7 8.7 89 106-215 444-536 (675)
92 PRK10563 6-phosphogluconate ph 98.0 6.5E-05 1.4E-09 71.8 11.8 113 89-211 67-183 (221)
93 PRK14988 GMP/IMP nucleotidase; 98.0 0.0002 4.3E-09 68.9 14.4 84 112-210 100-189 (224)
94 PLN02940 riboflavin kinase 97.9 0.00014 3.1E-09 75.6 13.6 87 113-213 101-193 (382)
95 COG2937 PlsB Glycerol-3-phosph 97.9 2.1E-05 4.6E-10 84.1 7.4 171 300-472 295-522 (810)
96 PRK08419 lipid A biosynthesis 97.9 7.9E-05 1.7E-09 74.9 11.3 157 285-468 96-274 (298)
97 PLN02349 glycerol-3-phosphate 97.9 6E-05 1.3E-09 76.1 9.0 164 301-468 201-412 (426)
98 PLN02779 haloacid dehalogenase 97.9 0.00076 1.6E-08 67.4 17.0 93 109-215 145-247 (286)
99 PHA02597 30.2 hypothetical pro 97.8 0.00036 7.8E-09 65.4 13.7 112 88-210 52-170 (197)
100 TIGR01993 Pyr-5-nucltdase pyri 97.8 0.00054 1.2E-08 63.5 14.5 91 109-210 85-181 (184)
101 TIGR01670 YrbI-phosphatas 3-de 97.8 5.6E-05 1.2E-09 68.3 7.4 81 113-216 36-121 (154)
102 PF13419 HAD_2: Haloacid dehal 97.8 0.00017 3.6E-09 65.3 10.6 104 90-209 60-172 (176)
103 PRK07920 lipid A biosynthesis 97.8 0.00011 2.4E-09 73.9 9.6 154 285-468 89-267 (298)
104 PRK12702 mannosyl-3-phosphogly 97.8 0.00019 4.2E-09 70.7 10.9 96 119-219 146-259 (302)
105 PLN02919 haloacid dehalogenase 97.8 0.00052 1.1E-08 80.2 15.9 87 109-210 162-258 (1057)
106 PRK11009 aphA acid phosphatase 97.6 0.00026 5.7E-09 68.4 9.7 100 112-230 121-231 (237)
107 COG2217 ZntA Cation transport 97.6 0.00011 2.5E-09 81.3 7.5 89 105-214 534-626 (713)
108 PRK09456 ?-D-glucose-1-phospha 97.6 0.0023 5E-08 60.1 15.5 87 109-209 85-180 (199)
109 TIGR01493 HAD-SF-IA-v2 Haloaci 97.6 0.00038 8.1E-09 63.9 9.7 76 109-202 91-171 (175)
110 TIGR01511 ATPase-IB1_Cu copper 97.6 0.00019 4.1E-09 78.5 8.7 87 106-214 403-493 (562)
111 PRK09449 dUMP phosphatase; Pro 97.6 0.0038 8.2E-08 59.7 16.6 90 109-214 96-197 (224)
112 PRK00192 mannosyl-3-phosphogly 97.5 0.00047 1E-08 68.3 9.3 41 175-215 190-235 (273)
113 TIGR01549 HAD-SF-IA-v1 haloaci 97.5 0.0019 4.1E-08 57.8 12.4 82 111-207 70-154 (154)
114 COG1011 Predicted hydrolase (H 97.5 0.0035 7.6E-08 59.9 15.0 93 108-216 99-202 (229)
115 PRK01122 potassium-transportin 97.5 0.00033 7E-09 77.6 8.4 86 107-214 444-534 (679)
116 PRK10671 copA copper exporting 97.4 0.00036 7.8E-09 80.0 8.9 88 107-215 649-740 (834)
117 COG0637 Predicted phosphatase/ 97.4 0.0022 4.9E-08 61.5 12.5 93 112-215 93-187 (221)
118 KOG3729 Mitochondrial glycerol 97.4 0.00038 8.2E-09 72.2 6.9 144 300-445 157-345 (715)
119 COG2121 Uncharacterized protei 97.3 0.0021 4.4E-08 59.6 10.1 99 353-464 104-204 (214)
120 PRK14010 potassium-transportin 97.3 0.00066 1.4E-08 75.1 7.9 86 107-214 440-530 (673)
121 PRK09484 3-deoxy-D-manno-octul 97.3 0.00069 1.5E-08 63.0 6.9 79 113-214 56-139 (183)
122 COG1560 HtrB Lauroyl/myristoyl 97.2 0.0041 8.9E-08 62.4 11.7 155 285-468 106-282 (308)
123 PRK10748 flavin mononucleotide 97.2 0.011 2.4E-07 57.2 14.4 87 109-215 114-210 (238)
124 COG4030 Uncharacterized protei 97.1 0.0021 4.6E-08 60.2 8.5 122 23-155 3-134 (315)
125 COG3700 AphA Acid phosphatase 97.1 0.00076 1.7E-08 60.8 5.2 87 105-208 114-205 (237)
126 TIGR01512 ATPase-IB2_Cd heavy 97.1 0.0011 2.3E-08 72.3 7.4 86 108-214 362-452 (536)
127 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0015 3.2E-08 71.5 8.4 86 107-213 383-473 (556)
128 TIGR02726 phenyl_P_delta pheny 97.0 0.0017 3.7E-08 59.5 7.1 83 114-216 43-127 (169)
129 PF03279 Lip_A_acyltrans: Bact 96.9 0.007 1.5E-07 60.6 11.1 156 284-469 103-280 (295)
130 TIGR01524 ATPase-IIIB_Mg magne 96.9 0.003 6.5E-08 72.6 8.7 101 109-214 516-629 (867)
131 COG1778 Low specificity phosph 96.8 0.0022 4.8E-08 56.9 5.4 83 113-218 43-130 (170)
132 KOG0207 Cation transport ATPas 96.8 0.0043 9.3E-08 68.9 8.5 91 105-216 720-814 (951)
133 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.0073 1.6E-07 52.7 8.5 31 112-143 36-68 (128)
134 TIGR02247 HAD-1A3-hyp Epoxide 96.8 0.0081 1.7E-07 56.8 9.5 86 109-209 95-191 (211)
135 PRK11033 zntA zinc/cadmium/mer 96.7 0.0046 9.9E-08 69.9 8.4 86 106-214 566-655 (741)
136 TIGR01664 DNA-3'-Pase DNA 3'-p 96.5 0.019 4E-07 52.6 9.8 84 112-210 49-158 (166)
137 TIGR01523 ATPase-IID_K-Na pota 96.5 0.0064 1.4E-07 71.2 8.3 102 108-213 646-771 (1053)
138 COG2216 KdpB High-affinity K+ 96.5 0.0077 1.7E-07 62.9 7.7 109 85-215 407-537 (681)
139 KOG3730 Acyl-CoA:dihydroxyacte 96.5 0.0015 3.2E-08 67.1 2.4 162 283-444 132-332 (685)
140 PRK10517 magnesium-transportin 96.4 0.0057 1.2E-07 70.5 6.8 101 108-213 550-663 (902)
141 PRK15122 magnesium-transportin 96.3 0.0088 1.9E-07 69.0 7.8 101 108-213 550-663 (903)
142 TIGR01647 ATPase-IIIA_H plasma 96.2 0.0085 1.8E-07 67.9 6.9 99 108-214 442-561 (755)
143 TIGR01517 ATPase-IIB_Ca plasma 96.2 0.014 3.1E-07 67.8 8.6 102 108-213 579-694 (941)
144 TIGR01691 enolase-ppase 2,3-di 96.1 0.25 5.4E-06 47.3 15.3 125 86-223 68-205 (220)
145 TIGR01116 ATPase-IIA1_Ca sarco 96.1 0.017 3.7E-07 67.0 8.5 97 109-214 538-657 (917)
146 PRK06628 lipid A biosynthesis 96.1 0.068 1.5E-06 53.5 11.8 155 285-467 99-273 (290)
147 PRK03669 mannosyl-3-phosphogly 96.0 0.0055 1.2E-07 60.6 3.7 51 172-222 184-242 (271)
148 TIGR01522 ATPase-IIA2_Ca golgi 96.0 0.022 4.7E-07 65.9 8.6 102 108-213 528-643 (884)
149 PF05822 UMPH-1: Pyrimidine 5' 95.9 0.03 6.5E-07 54.1 7.9 118 85-206 72-198 (246)
150 PRK06946 lipid A biosynthesis 95.9 0.099 2.2E-06 52.4 12.1 153 285-468 94-268 (293)
151 PRK06553 lipid A biosynthesis 95.9 0.073 1.6E-06 53.7 11.0 157 285-468 116-293 (308)
152 TIGR01663 PNK-3'Pase polynucle 95.8 0.023 5.1E-07 61.2 7.3 60 342-403 392-456 (526)
153 PRK10530 pyridoxal phosphate ( 95.7 0.026 5.6E-07 55.5 6.8 42 172-213 196-241 (272)
154 PRK14502 bifunctional mannosyl 95.4 0.06 1.3E-06 59.2 8.9 49 173-221 611-666 (694)
155 TIGR02463 MPGP_rel mannosyl-3- 95.4 0.018 3.8E-07 55.0 4.5 40 173-212 177-220 (221)
156 TIGR01533 lipo_e_P4 5'-nucleot 95.4 0.089 1.9E-06 51.8 9.3 73 113-201 126-202 (266)
157 KOG2914 Predicted haloacid-hal 95.4 0.39 8.4E-06 46.0 13.2 117 86-216 69-198 (222)
158 COG0474 MgtA Cation transport 95.4 0.016 3.4E-07 67.1 4.5 99 111-214 553-665 (917)
159 PRK10976 putative hydrolase; P 95.3 0.0093 2E-07 58.6 2.3 45 172-216 187-235 (266)
160 PRK10513 sugar phosphate phosp 95.3 0.0087 1.9E-07 58.9 2.0 44 172-215 193-240 (270)
161 PLN02811 hydrolase 95.3 0.26 5.7E-06 46.9 12.1 92 109-213 79-183 (220)
162 PRK10530 pyridoxal phosphate ( 95.3 0.13 2.8E-06 50.5 10.3 66 115-185 30-98 (272)
163 TIGR01494 ATPase_P-type ATPase 95.3 0.047 1E-06 59.0 7.5 83 107-213 346-432 (499)
164 PRK08943 lipid A biosynthesis 95.2 0.2 4.4E-06 50.6 11.6 154 285-468 114-289 (314)
165 TIGR02208 lipid_A_msbB lipid A 95.2 0.28 6E-06 49.5 12.5 154 285-468 105-280 (305)
166 PRK06860 lipid A biosynthesis 95.2 0.17 3.6E-06 51.1 10.9 156 285-471 109-286 (309)
167 TIGR01486 HAD-SF-IIB-MPGP mann 95.1 0.022 4.8E-07 55.7 4.2 39 178-216 182-223 (256)
168 TIGR01487 SPP-like sucrose-pho 95.1 0.053 1.2E-06 51.5 6.7 78 122-214 109-190 (215)
169 PRK03669 mannosyl-3-phosphogly 95.1 0.065 1.4E-06 52.9 7.5 33 116-149 35-70 (271)
170 PRK05646 lipid A biosynthesis 95.1 0.31 6.7E-06 49.2 12.4 153 285-468 106-281 (310)
171 PRK08734 lipid A biosynthesis 95.0 0.36 7.8E-06 48.7 12.7 155 285-468 96-271 (305)
172 COG0561 Cof Predicted hydrolas 95.0 0.013 2.8E-07 57.5 2.1 52 172-223 186-242 (264)
173 PF08282 Hydrolase_3: haloacid 94.9 0.017 3.8E-07 55.3 2.8 45 172-216 183-231 (254)
174 PRK10513 sugar phosphate phosp 94.9 0.12 2.6E-06 50.7 8.9 30 115-145 30-60 (270)
175 PRK15126 thiamin pyrimidine py 94.9 0.012 2.7E-07 58.0 1.7 44 172-215 185-232 (272)
176 PRK08706 lipid A biosynthesis 94.9 0.23 5E-06 49.6 10.9 153 285-468 89-264 (289)
177 TIGR02461 osmo_MPG_phos mannos 94.9 0.021 4.5E-07 55.0 3.2 41 173-213 179-225 (225)
178 PRK15126 thiamin pyrimidine py 94.8 0.077 1.7E-06 52.4 7.1 35 115-150 29-65 (272)
179 PRK01158 phosphoglycolate phos 94.8 0.08 1.7E-06 50.6 7.1 17 20-36 3-19 (230)
180 TIGR01106 ATPase-IIC_X-K sodiu 94.7 0.085 1.9E-06 61.8 8.2 102 109-213 569-709 (997)
181 COG3769 Predicted hydrolase (H 94.6 0.076 1.7E-06 49.9 6.0 84 122-219 150-242 (274)
182 PRK10976 putative hydrolase; P 94.5 0.1 2.2E-06 51.2 7.3 64 115-184 29-95 (266)
183 COG4087 Soluble P-type ATPase 94.5 0.2 4.4E-06 43.3 7.8 80 121-219 46-126 (152)
184 TIGR01482 SPP-subfamily Sucros 94.5 0.13 2.8E-06 48.9 7.8 79 124-215 111-193 (225)
185 smart00775 LNS2 LNS2 domain. T 94.1 0.29 6.4E-06 44.2 8.7 100 113-217 35-153 (157)
186 PRK08733 lipid A biosynthesis 94.1 0.35 7.7E-06 48.7 10.2 151 285-468 109-280 (306)
187 PRK08905 lipid A biosynthesis 94.1 0.8 1.7E-05 45.7 12.6 153 286-468 85-258 (289)
188 PRK01158 phosphoglycolate phos 93.8 0.19 4.1E-06 48.0 7.2 43 172-214 154-200 (230)
189 PLN02887 hydrolase family prot 93.6 0.038 8.3E-07 60.4 2.1 45 172-216 504-552 (580)
190 PRK12702 mannosyl-3-phosphogly 93.2 0.28 6.1E-06 48.7 7.3 29 116-145 29-58 (302)
191 TIGR02207 lipid_A_htrB lipid A 93.1 0.76 1.6E-05 46.2 10.6 157 284-471 102-280 (303)
192 TIGR01675 plant-AP plant acid 93.0 0.92 2E-05 43.6 10.4 75 115-200 130-209 (229)
193 TIGR01657 P-ATPase-V P-type AT 92.9 0.42 9.2E-06 56.4 9.5 36 108-144 656-695 (1054)
194 PRK05906 lipid A biosynthesis 92.5 1.7 3.7E-05 46.2 12.6 100 300-402 139-257 (454)
195 TIGR00099 Cof-subfamily Cof su 92.5 0.064 1.4E-06 52.4 1.8 42 172-213 185-230 (256)
196 PRK08025 lipid A biosynthesis 92.3 1.6 3.5E-05 43.9 11.7 117 284-404 106-244 (305)
197 TIGR01652 ATPase-Plipid phosph 92.3 0.61 1.3E-05 55.2 9.8 33 111-144 637-670 (1057)
198 PF08645 PNK3P: Polynucleotide 91.9 0.07 1.5E-06 48.4 1.2 17 21-37 1-17 (159)
199 PTZ00174 phosphomannomutase; P 91.7 0.12 2.5E-06 50.4 2.6 40 172-211 185-231 (247)
200 PF05116 S6PP: Sucrose-6F-phos 91.6 0.13 2.7E-06 50.3 2.7 45 172-216 162-210 (247)
201 PLN02382 probable sucrose-phos 91.6 0.12 2.6E-06 54.4 2.7 44 172-215 172-223 (413)
202 PRK15174 Vi polysaccharide exp 91.6 2.1 4.5E-05 48.0 12.6 143 300-474 478-636 (656)
203 TIGR02471 sucr_syn_bact_C sucr 91.6 0.11 2.4E-06 50.1 2.2 50 172-221 156-210 (236)
204 TIGR01662 HAD-SF-IIIA HAD-supe 91.4 1.3 2.9E-05 38.2 8.8 83 113-210 33-127 (132)
205 PF03982 DAGAT: Diacylglycerol 91.4 0.37 8E-06 48.3 5.8 64 340-409 117-195 (297)
206 PRK14502 bifunctional mannosyl 91.4 0.6 1.3E-05 51.6 7.8 33 116-149 444-478 (694)
207 TIGR01484 HAD-SF-IIB HAD-super 91.3 0.11 2.4E-06 48.8 1.8 41 172-212 160-204 (204)
208 PRK05645 lipid A biosynthesis 91.0 6.5 0.00014 39.3 14.4 155 285-468 95-270 (295)
209 TIGR01261 hisB_Nterm histidino 90.9 0.92 2E-05 41.2 7.4 90 112-212 36-145 (161)
210 PLN02887 hydrolase family prot 90.6 0.82 1.8E-05 50.1 8.0 31 114-145 334-365 (580)
211 KOG3109 Haloacid dehalogenase- 90.6 16 0.00034 34.8 16.3 107 88-207 81-198 (244)
212 PHA02530 pseT polynucleotide k 90.6 0.49 1.1E-05 47.3 5.9 93 109-211 188-293 (300)
213 KOG0202 Ca2+ transporting ATPa 90.5 0.79 1.7E-05 51.2 7.6 94 113-213 592-703 (972)
214 TIGR01485 SPP_plant-cyano sucr 90.2 0.25 5.5E-06 48.0 3.3 42 173-214 165-211 (249)
215 PRK05446 imidazole glycerol-ph 87.4 1.8 3.9E-05 44.5 7.3 91 112-216 37-151 (354)
216 PLN03190 aminophospholipid tra 86.7 1.2 2.5E-05 53.2 6.2 52 189-240 873-931 (1178)
217 TIGR00213 GmhB_yaeD D,D-heptos 86.6 3.5 7.5E-05 37.7 8.2 96 112-214 33-152 (176)
218 TIGR01689 EcbF-BcbF capsule bi 86.1 0.45 9.7E-06 41.4 1.8 15 20-34 1-15 (126)
219 PRK08942 D,D-heptose 1,7-bisph 85.3 3.8 8.3E-05 37.6 7.9 26 189-214 122-147 (181)
220 PRK10187 trehalose-6-phosphate 85.0 0.76 1.6E-05 45.3 3.1 44 172-215 171-222 (266)
221 PTZ00174 phosphomannomutase; P 84.9 0.84 1.8E-05 44.4 3.4 18 19-36 4-21 (247)
222 TIGR01656 Histidinol-ppas hist 84.9 5.4 0.00012 35.3 8.4 86 112-211 34-142 (147)
223 smart00577 CPDc catalytic doma 84.8 1.6 3.5E-05 38.8 4.9 29 115-145 55-84 (148)
224 KOG3128 Uncharacterized conser 84.5 2 4.4E-05 41.4 5.5 117 86-207 121-248 (298)
225 PRK06769 hypothetical protein; 84.1 2.6 5.7E-05 38.5 6.1 92 112-214 35-138 (173)
226 TIGR01684 viral_ppase viral ph 83.6 0.64 1.4E-05 46.2 1.9 33 113-146 154-187 (301)
227 TIGR01685 MDP-1 magnesium-depe 81.8 2.4 5.1E-05 39.1 4.8 33 112-145 52-86 (174)
228 PLN02423 phosphomannomutase 81.1 0.92 2E-05 44.2 2.0 33 172-205 186-222 (245)
229 PLN02423 phosphomannomutase 81.1 1.7 3.6E-05 42.3 3.8 19 18-36 4-23 (245)
230 TIGR01668 YqeG_hyp_ppase HAD s 81.1 6.1 0.00013 36.0 7.3 81 113-213 51-136 (170)
231 TIGR02244 HAD-IG-Ncltidse HAD 81.0 5.5 0.00012 40.8 7.5 101 113-214 192-324 (343)
232 smart00775 LNS2 LNS2 domain. T 80.8 0.77 1.7E-05 41.5 1.2 14 22-35 1-14 (157)
233 PF12689 Acid_PPase: Acid Phos 80.5 0.83 1.8E-05 41.8 1.3 34 111-145 51-86 (169)
234 COG3176 Putative hemolysin [Ge 80.1 2.9 6.2E-05 41.6 5.0 126 276-405 58-204 (292)
235 TIGR01670 YrbI-phosphatas 3-de 77.5 1.3 2.8E-05 39.7 1.6 15 20-34 1-15 (154)
236 TIGR01662 HAD-SF-IIIA HAD-supe 76.8 1.4 3.1E-05 38.0 1.7 14 21-34 1-14 (132)
237 KOG4666 Predicted phosphate ac 75.6 0.21 4.6E-06 49.4 -4.2 169 300-481 185-374 (412)
238 PF08235 LNS2: LNS2 (Lipin/Ned 75.5 1.3 2.9E-05 39.9 1.1 45 173-217 100-153 (157)
239 TIGR01656 Histidinol-ppas hist 75.5 1.7 3.8E-05 38.5 1.9 17 21-37 1-17 (147)
240 PHA03398 viral phosphatase sup 75.5 1.6 3.6E-05 43.4 1.8 33 113-146 156-189 (303)
241 PF06941 NT5C: 5' nucleotidase 75.4 1.6 3.5E-05 40.6 1.7 32 112-143 80-119 (191)
242 PF13344 Hydrolase_6: Haloacid 73.3 1.8 4E-05 35.9 1.3 17 23-39 1-17 (101)
243 TIGR01685 MDP-1 magnesium-depe 72.0 2.1 4.6E-05 39.4 1.5 23 189-211 132-154 (174)
244 PRK09484 3-deoxy-D-manno-octul 71.4 2.1 4.6E-05 39.6 1.4 15 20-34 21-35 (183)
245 TIGR01487 SPP-like sucrose-pho 70.3 6.3 0.00014 37.1 4.5 36 113-149 26-63 (215)
246 COG1778 Low specificity phosph 69.7 2.8 6.1E-05 37.6 1.7 15 21-35 9-23 (170)
247 PF11019 DUF2608: Protein of u 68.1 31 0.00066 33.8 8.8 92 111-206 87-197 (252)
248 TIGR02463 MPGP_rel mannosyl-3- 66.5 9.8 0.00021 35.9 5.0 31 114-145 25-56 (221)
249 PLN02580 trehalose-phosphatase 66.4 1.8 3.9E-05 45.0 -0.2 57 152-213 283-351 (384)
250 PF05761 5_nucleotid: 5' nucle 65.8 18 0.0004 38.4 7.2 92 113-205 191-314 (448)
251 PF03031 NIF: NLI interacting 65.7 3.5 7.7E-05 36.8 1.6 22 122-144 53-74 (159)
252 PRK10187 trehalose-6-phosphate 65.0 4.8 0.0001 39.6 2.6 25 120-145 52-77 (266)
253 PRK10444 UMP phosphatase; Prov 64.6 3.9 8.4E-05 39.9 1.8 19 21-39 2-20 (248)
254 TIGR01261 hisB_Nterm histidino 64.4 4.3 9.2E-05 36.8 1.9 17 20-36 1-17 (161)
255 PRK08942 D,D-heptose 1,7-bisph 63.8 4.6 0.0001 37.0 2.1 16 19-34 2-17 (181)
256 TIGR01684 viral_ppase viral ph 63.2 15 0.00031 36.8 5.5 16 19-34 125-140 (301)
257 KOG4321 Predicted phosphate ac 63.2 11 0.00024 34.0 4.2 114 286-405 32-162 (279)
258 TIGR01458 HAD-SF-IIA-hyp3 HAD- 62.9 4.6 9.9E-05 39.5 2.0 16 21-36 2-17 (257)
259 COG5083 SMP2 Uncharacterized p 62.5 6.4 0.00014 41.0 2.9 18 19-36 374-391 (580)
260 TIGR00685 T6PP trehalose-phosp 62.3 12 0.00026 36.2 4.8 34 173-206 165-202 (244)
261 TIGR01457 HAD-SF-IIA-hyp2 HAD- 62.2 4.4 9.5E-05 39.4 1.7 17 21-37 2-18 (249)
262 TIGR00213 GmhB_yaeD D,D-heptos 60.9 4.9 0.00011 36.7 1.7 14 21-34 2-15 (176)
263 TIGR01452 PGP_euk phosphoglyco 60.7 4.7 0.0001 39.9 1.6 19 21-39 3-21 (279)
264 TIGR02726 phenyl_P_delta pheny 60.6 4.9 0.00011 36.8 1.6 15 20-34 7-21 (169)
265 PLN02645 phosphoglycolate phos 59.9 5.3 0.00011 40.3 1.8 19 19-37 27-45 (311)
266 PLN03017 trehalose-phosphatase 59.3 3.1 6.6E-05 42.9 -0.0 51 152-207 265-322 (366)
267 COG0561 Cof Predicted hydrolas 58.4 16 0.00035 35.5 5.0 65 114-184 29-95 (264)
268 KOG0203 Na+/K+ ATPase, alpha s 57.4 9.2 0.0002 43.1 3.2 34 110-144 595-629 (1019)
269 TIGR00099 Cof-subfamily Cof su 57.0 17 0.00037 35.1 4.9 66 114-185 25-93 (256)
270 TIGR00685 T6PP trehalose-phosp 56.7 6.4 0.00014 38.1 1.7 15 20-34 3-17 (244)
271 PLN02151 trehalose-phosphatase 56.3 3.8 8.2E-05 42.1 0.1 51 152-207 251-308 (354)
272 KOG3085 Predicted hydrolase (H 55.9 1.3E+02 0.0028 29.2 10.4 31 112-144 120-151 (237)
273 COG0647 NagD Predicted sugar p 55.8 6.7 0.00015 38.7 1.7 23 20-42 8-30 (269)
274 TIGR01456 CECR5 HAD-superfamil 55.3 9.9 0.00021 38.5 2.9 18 22-39 2-19 (321)
275 PHA03398 viral phosphatase sup 55.1 23 0.0005 35.4 5.3 16 19-34 127-142 (303)
276 PRK14501 putative bifunctional 53.2 13 0.00028 42.2 3.8 42 172-213 654-700 (726)
277 TIGR01482 SPP-subfamily Sucros 52.4 23 0.00051 33.2 4.9 34 115-149 25-60 (225)
278 TIGR02251 HIF-SF_euk Dullard-l 51.0 13 0.00027 33.7 2.6 24 122-146 59-82 (162)
279 TIGR02461 osmo_MPG_phos mannos 50.8 25 0.00055 33.6 4.8 35 114-149 24-60 (225)
280 TIGR01486 HAD-SF-IIB-MPGP mann 50.7 26 0.00056 34.0 5.0 36 115-151 26-63 (256)
281 TIGR01460 HAD-SF-IIA Haloacid 50.5 6.8 0.00015 37.8 0.8 16 23-38 1-16 (236)
282 PRK00192 mannosyl-3-phosphogly 49.5 27 0.00058 34.3 4.9 31 114-145 30-61 (273)
283 COG2179 Predicted hydrolase of 48.1 32 0.00069 31.3 4.6 40 109-149 47-90 (175)
284 KOG2134 Polynucleotide kinase 45.7 11 0.00024 38.8 1.4 57 344-402 294-355 (422)
285 PF09419 PGP_phosphatase: Mito 44.6 16 0.00035 33.4 2.2 32 5-36 19-57 (168)
286 PF05152 DUF705: Protein of un 44.2 15 0.00032 36.4 2.0 29 116-145 153-182 (297)
287 PF08282 Hydrolase_3: haloacid 43.7 35 0.00075 32.1 4.6 36 114-150 24-61 (254)
288 TIGR02245 HAD_IIID1 HAD-superf 43.6 21 0.00045 33.5 2.8 22 122-144 62-83 (195)
289 TIGR02251 HIF-SF_euk Dullard-l 42.9 15 0.00031 33.3 1.7 15 21-35 2-16 (162)
290 smart00577 CPDc catalytic doma 41.9 17 0.00036 32.2 1.9 15 21-35 3-17 (148)
291 PLN02382 probable sucrose-phos 41.7 18 0.00039 38.1 2.4 22 14-35 3-24 (413)
292 TIGR02250 FCP1_euk FCP1-like p 41.2 20 0.00044 32.2 2.3 43 109-152 59-105 (156)
293 COG1877 OtsB Trehalose-6-phosp 41.1 16 0.00034 36.1 1.7 36 173-208 180-219 (266)
294 TIGR01686 FkbH FkbH-like domai 41.0 1E+02 0.0022 31.1 7.7 78 112-207 38-123 (320)
295 PLN02580 trehalose-phosphatase 40.6 53 0.0011 34.2 5.5 26 9-34 108-133 (384)
296 COG1548 Predicted transcriptio 40.3 94 0.002 30.5 6.7 55 88-145 246-302 (330)
297 KOG0210 P-type ATPase [Inorgan 39.5 84 0.0018 35.1 6.9 80 117-217 723-811 (1051)
298 KOG3189 Phosphomannomutase [Li 39.3 18 0.0004 33.8 1.7 25 20-44 11-36 (252)
299 TIGR01686 FkbH FkbH-like domai 38.9 16 0.00035 36.9 1.5 16 19-34 2-17 (320)
300 PRK14501 putative bifunctional 38.8 16 0.00035 41.4 1.6 28 116-144 525-554 (726)
301 COG4996 Predicted phosphatase 38.2 19 0.0004 31.4 1.5 32 115-147 51-83 (164)
302 TIGR01680 Veg_Stor_Prot vegeta 37.3 20 0.00043 35.4 1.7 80 111-200 148-235 (275)
303 COG2179 Predicted hydrolase of 37.3 15 0.00033 33.4 0.9 19 18-36 26-44 (175)
304 PF03767 Acid_phosphat_B: HAD 37.2 19 0.00042 34.6 1.6 79 114-202 124-207 (229)
305 PF08235 LNS2: LNS2 (Lipin/Ned 37.2 1.2E+02 0.0026 27.4 6.6 20 116-135 38-58 (157)
306 KOG0541 Alkyl hydroperoxide re 36.1 85 0.0018 28.3 5.3 48 115-166 72-121 (171)
307 TIGR01484 HAD-SF-IIB HAD-super 35.9 56 0.0012 30.1 4.6 34 114-149 26-60 (204)
308 KOG3954 Electron transfer flav 35.2 37 0.0008 33.2 3.1 83 122-209 218-317 (336)
309 TIGR01459 HAD-SF-IIA-hyp4 HAD- 34.8 46 0.001 32.0 3.9 76 113-207 32-115 (242)
310 PF02358 Trehalose_PPase: Treh 34.8 18 0.00038 34.7 0.9 10 24-33 1-10 (235)
311 KOG0204 Calcium transporting A 34.2 74 0.0016 36.4 5.6 101 106-213 645-764 (1034)
312 PF13344 Hydrolase_6: Haloacid 34.2 72 0.0016 26.2 4.4 33 111-145 20-57 (101)
313 PRK05446 imidazole glycerol-ph 33.6 27 0.00058 36.0 2.1 18 19-36 1-18 (354)
314 PF05116 S6PP: Sucrose-6F-phos 33.2 25 0.00054 34.2 1.7 14 19-32 1-14 (247)
315 COG5663 Uncharacterized conser 32.5 1E+02 0.0022 28.2 5.2 27 174-204 124-150 (194)
316 PF00875 DNA_photolyase: DNA p 32.5 69 0.0015 28.7 4.4 36 115-151 60-96 (165)
317 COG0241 HisB Histidinol phosph 32.0 1.3E+02 0.0029 27.8 6.2 33 176-208 107-143 (181)
318 TIGR01668 YqeG_hyp_ppase HAD s 31.7 29 0.00063 31.5 1.8 33 4-36 4-41 (170)
319 TIGR01459 HAD-SF-IIA-hyp4 HAD- 29.7 29 0.00064 33.3 1.6 20 20-39 8-27 (242)
320 PRK04974 glycerol-3-phosphate 29.5 2.4E+02 0.0053 32.5 8.9 23 300-322 38-60 (818)
321 KOG3360 Acylphosphatase [Energ 28.8 1.2E+02 0.0026 24.9 4.6 45 130-185 23-67 (98)
322 COG3411 Ferredoxin [Energy pro 28.1 45 0.00098 25.2 1.9 19 359-377 10-29 (64)
323 TIGR03123 one_C_unchar_1 proba 27.0 1.9E+02 0.0041 29.3 6.8 61 85-147 237-303 (318)
324 cd07571 ALP_N-acyl_transferase 25.9 46 0.001 32.6 2.2 38 360-397 33-76 (270)
325 TIGR02250 FCP1_euk FCP1-like p 25.2 1.6E+02 0.0034 26.4 5.3 18 19-36 5-22 (156)
326 PLN02205 alpha,alpha-trehalose 24.9 1E+02 0.0022 35.8 5.0 37 172-208 759-802 (854)
327 PLN02205 alpha,alpha-trehalose 24.3 45 0.00097 38.7 2.0 23 118-140 630-653 (854)
328 PLN02645 phosphoglycolate phos 23.2 94 0.002 31.2 3.9 84 111-214 50-138 (311)
329 PRK14556 pyrH uridylate kinase 21.3 1.9E+02 0.0041 28.3 5.3 42 116-163 131-180 (249)
330 PTZ00445 p36-lilke protein; Pr 21.1 38 0.00083 32.2 0.5 17 20-36 43-59 (219)
331 PLN03064 alpha,alpha-trehalose 21.0 41 0.00088 39.2 0.8 16 19-34 590-605 (934)
332 PRK04220 2-phosphoglycerate ki 20.9 3.1E+02 0.0067 27.6 6.9 64 88-152 55-126 (301)
333 TIGR03703 plsB glycerol-3-phos 20.9 5.4E+02 0.012 29.7 9.6 23 300-322 28-50 (799)
334 PF09949 DUF2183: Uncharacteri 20.5 3.3E+02 0.0071 22.5 5.9 76 123-205 2-83 (100)
335 PF07788 DUF1626: Protein of u 20.4 2.8E+02 0.006 21.5 5.0 23 122-145 48-70 (70)
No 1
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=4.9e-97 Score=777.10 Aligned_cols=490 Identities=66% Similarity=1.183 Sum_probs=446.4
Q ss_pred CCCCCCccccCC--CCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHH
Q 010860 6 GRKFPPITECNG--SAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFI 83 (499)
Q Consensus 6 ~~~~~~~~~~~~--~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 83 (499)
.|.||+|++|++ ..+.+++|||||||+.++|+|.+|+.++++++++++.+..+..+|++++++..++++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~ 85 (497)
T PLN02177 6 SRRFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFI 85 (497)
T ss_pred cCCCCccccCCcccccccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHH
Confidence 477999999977 577899999999999999999999999888788888877766778888665446677778888889
Q ss_pred HhcCCCHHHHHHHHHHHhhhHHHhhccHHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceee
Q 010860 84 SFSGLKIRDIELASRAVLPRFYAADVRKESYEVFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATG 163 (499)
Q Consensus 84 ~l~G~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG 163 (499)
+|+|++++++++++++|+++++.+.+++++++.++++|++||||||++.+|+|||+++||+|+||||+++++. +|++||
T Consensus 86 ~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~~~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~-~G~~TG 164 (497)
T PLN02177 86 AFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSK-SGRATG 164 (497)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECc-CCEEee
Confidence 9999999999999999999998889999999999999966999999999999999877999999999999832 899999
Q ss_pred eEecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCcccCCceeEEccCccCCCCCh
Q 010860 164 FVKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPRDRLKSRIIFHDGRLVQRPDP 243 (499)
Q Consensus 164 ~~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~~~~~~~~~f~~~r~~~~~~~ 243 (499)
++.|++||+|++|++++++++|.+..++|||||.+|+|||++|+++|+||+++ |+++|+.++.+|++|||||++++|+|
T Consensus 165 ~i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~-~~~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 165 FMKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTK-CEPLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred eecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCC-CCcCCcccCCCceeeeCCcccCCCCH
Confidence 99997678999999999998885445699999999999999999999999955 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhC
Q 010860 244 LNALITYIWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALG 323 (499)
Q Consensus 244 ~~~l~~~~~~p~~~~l~~~r~~~~~~~p~~~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~ 323 (499)
+.++++++|+|+|++|+++|+++++.+|.+|++.+++++|++++|+|.+++|+...++++|+||||+|++|++++.+.++
T Consensus 244 ~~~l~~~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~lD~~~l~~al~ 323 (497)
T PLN02177 244 LVALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTVLDPVVTAVALG 323 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCcchHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999874223479999999999999999999998
Q ss_pred CccceeeecccccccccccCCeeEeecCCHHHHHHHHHHhhCCCEEEecCCeecCCCcccccchhhhhcCCcEEEEEEee
Q 010860 324 RKVSCVTYSVSKLSRFLSPIPAIALTRDRAADAARISELLQKGDLVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNC 403 (499)
Q Consensus 324 ~~~~~v~~~v~k~~~~~~~~~~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~ 403 (499)
+++.++.++++++++++.++++++++|++.++..++++.+++|+++|||||||++++.+++||++++++.+|||||+|.+
T Consensus 324 ~~~~~v~~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~lvIFPEGTrs~~~~l~~Fk~~fa~l~~pIVPVAI~~ 403 (497)
T PLN02177 324 RKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINT 403 (497)
T ss_pred CCeEEEeehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCCEEECcCcCCCCCCCcchHHHHHHHHCCcEEEEEEEc
Confidence 88777777777777788899999999998777788889999999999999999999999999999988889999999999
Q ss_pred ccCCccccccCCcccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCCCHHHHHHh
Q 010860 404 KQNMFYGTTVRGVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGLTRKDKYML 483 (499)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk~~~ 483 (499)
+..+|++++.++++++|++|++|+|++.++|+||+|++++..|. .+++..++|++||+.|+++|++++|++|.+|||+.
T Consensus 404 ~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~-~~~~~~evAn~Vq~~i~~~lg~~~t~~tr~dk~~~ 482 (497)
T PLN02177 404 KQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCK-GGKSPIEVANYIQRVLAGTLGFECTNLTRKDKYAI 482 (497)
T ss_pred ccccccccccccceecchhhhhcCCCceEEEEECCCCChhhccc-CCCCHHHHHHHHHHHHHHhhCceeccccHHHHHHH
Confidence 99999988889999999999999999999999999999985333 57899999999999999999999999999999999
Q ss_pred hcCCCccccccccCC
Q 010860 484 LGGNDGKVESMYNSK 498 (499)
Q Consensus 484 l~~~~~~~~~~~~~~ 498 (499)
|.||+|.|++..+.|
T Consensus 483 l~gn~g~v~~~~~~~ 497 (497)
T PLN02177 483 LAGTDGRVPSKKEKK 497 (497)
T ss_pred hcCCCccccCCCCCC
Confidence 999999998876543
No 2
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=3.1e-87 Score=685.74 Aligned_cols=480 Identities=47% Similarity=0.822 Sum_probs=437.5
Q ss_pred ccCCCCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHH
Q 010860 14 ECNGSAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDI 93 (499)
Q Consensus 14 ~~~~~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l 93 (499)
|.+++.+...+|||||||+.+.|+|.+|+..+++.++..|.+.++..+|++++++....++..++.++..+|.|++++++
T Consensus 2 ~~~~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~v~f~Gl~~~di 81 (498)
T PLN02499 2 EQSGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIFVATAGVHESEI 81 (498)
T ss_pred CcCCcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHHHHhCCCCHHHH
Confidence 45677888999999999999889999999988888899998877778899986653223455577899999999999999
Q ss_pred HHHHHHHhhhHHHhhccHHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccc
Q 010860 94 ELASRAVLPRFYAADVRKESYEVFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVG 173 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g 173 (499)
++.++.|+++++.+.+++++++.++++|++++|||||+.+||||+++|||+|.|+||++++.+ .|++||.+.|.+ | +
T Consensus 82 e~vaRavlpkf~~~dv~~e~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~-~G~~TG~~~G~n-~-~ 158 (498)
T PLN02499 82 ESVARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNR-FGFATGFIRGTD-V-D 158 (498)
T ss_pred HHHHHHHhhHHHHhhCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEee-ccEEEEEEecCc-c-H
Confidence 999999999999999999999999998899999999999999999999999999999999982 399999999964 4 6
Q ss_pred hhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCC--CCCCCCCcccCCceeEEccCccCCCCChHHHHHHHH
Q 010860 174 KWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPS--KSAKPLPRDRLKSRIIFHDGRLVQRPDPLNALITYI 251 (499)
Q Consensus 174 ~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~--~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~l~~~~ 251 (499)
+.|++++++.+|+..+++++||+.+|.+++..|++-++++.. +.|+++||.++..|++|||||++++|+|+.++++++
T Consensus 159 ek~~~rl~~~~g~~~~~vg~~~~~~~~~f~~~ck~~~~~~~~~~~~~~~~~~~~~~~p~ifhdgrl~~~ptp~~~l~~~~ 238 (498)
T PLN02499 159 QSVANRVANLFVDERPQLGLGRISASSSFLSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILL 238 (498)
T ss_pred HHHHHHHHHHhCccCceecccCCcccchhhhhCceEEecCcccccccccCccccCCCCeEEeCCcccCCCCHHHHHHHHH
Confidence 666999999998655789999999999999999988887764 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeee
Q 010860 252 WLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTY 331 (499)
Q Consensus 252 ~~p~~~~l~~~r~~~~~~~p~~~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~ 331 (499)
|+|+|++++++|+..+..+|.+....+..++|++++|+|.||+|+..+++++|+||||+|++|++++..++++++.++.+
T Consensus 239 w~P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~lDp~~l~~al~R~v~~vay 318 (498)
T PLN02499 239 WIPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPASGGNSGVLFVCTHRTLMDPVVLSTVLGRSIPAVTY 318 (498)
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCcCCCCCEEEEeCCCCcccHHHHHHHcCCceeehHh
Confidence 99999999999999998899988889999999999999999998633347999999999999999999999999877777
Q ss_pred cccccccccccCCeeEeecCCHHHHHHHHHHhhCCCEEEecCCeecCCCcccccchhhhhcCCcEEEEEEeeccCCcccc
Q 010860 332 SVSKLSRFLSPIPAIALTRDRAADAARISELLQKGDLVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNCKQNMFYGT 411 (499)
Q Consensus 332 ~v~k~~~~~~~~~~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~~~~~~~~~ 411 (499)
+++.+++++++++++.++|++..+.+++++.|++|.++|||||||++++.|++||++++++.+|||||+|.+..++|+++
T Consensus 319 ~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~~~~f~gt 398 (498)
T PLN02499 319 SISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHAT 398 (498)
T ss_pred hHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCCEEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEeccceEEEE
Confidence 77777788899999999999888889999999999999999999999999999999999989999999999999999999
Q ss_pred ccCCcccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCCCHHHHHHhhcCCCccc
Q 010860 412 TVRGVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGLTRKDKYMLLGGNDGKV 491 (499)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk~~~l~~~~~~~ 491 (499)
+.+||+++|++|++|+|++.++|+||++++.+..|. .+++..++|++||+.|+++||+++|++|.+|||+.|.||+|.|
T Consensus 399 ta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~-~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~lagndg~v 477 (498)
T PLN02499 399 TARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCS-SGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 477 (498)
T ss_pred cCCCCchhhhhhheecCCceEEEEEcCCCChhhccC-CCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHhcCCCccc
Confidence 889999999999999999999999999999875554 5789999999999999999999999999999999999999999
Q ss_pred cccccC
Q 010860 492 ESMYNS 497 (499)
Q Consensus 492 ~~~~~~ 497 (499)
++..+.
T Consensus 478 ~~~~~~ 483 (498)
T PLN02499 478 SYLSFL 483 (498)
T ss_pred cCccch
Confidence 876654
No 3
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=3.6e-78 Score=615.90 Aligned_cols=464 Identities=42% Similarity=0.752 Sum_probs=409.5
Q ss_pred cCCCCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHH
Q 010860 15 CNGSAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIE 94 (499)
Q Consensus 15 ~~~~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~ 94 (499)
+++..+...++|+||||+.+.|+|+||+..+++.++++|.+.+++.+|++++ .+++.+++.+++..+.|+.+++++
T Consensus 45 ~~~~~~~t~v~d~~g~Ll~s~s~FpyfmlvA~Eag~~lR~l~Ll~~~P~~~~----~~~~~~~~~m~~v~f~Gl~~~~~~ 120 (525)
T PLN02588 45 YQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLYPFISL----MSYEMGLKTMVMLSFFGVKKESFR 120 (525)
T ss_pred ccccccceEEEecccceeccCCCCcceeeeeeccccHHHHHHHHHHhHHHHH----hccchhhHHhHHHhhcCCcHHHhh
Confidence 4556777899999999999999999999999999999999888888998885 356777888999999999999888
Q ss_pred HHHHHHhhhHHHhhccHHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccch
Q 010860 95 LASRAVLPRFYAADVRKESYEVFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGK 174 (499)
Q Consensus 95 ~~~~~~~~~~~~~~i~~~~~~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~ 174 (499)
.++..+++++.+.+.+|+++..+..|+.++||+.|+.+||+++++|||+|.|+||++++. .|++||.+.+ +
T Consensus 121 -v~ravLPkf~~~dv~~e~~~v~~~~~~~~vv~~~PrvMve~Flkeyl~~d~V~g~El~~~--~g~~tG~~~~------~ 191 (525)
T PLN02588 121 -AGKAVLPKYFLEDVGLEMFQVLKRGGKRVGVSDLPQVMIDVFLRDYLEIEVVVGRDMKMV--GGYYLGIMED------K 191 (525)
T ss_pred -hHHhhccHHHHhhcCHHHHHHHhhcCcEEEEecCCHHHHHHHHHHhcCcceEeeeeEEEe--eeEEEEEEcc------c
Confidence 999999999999999999998877777777888999999999999999999999999998 8999999875 2
Q ss_pred hHHHHHHH-HhCCCCC----eEEEeCC---cCcHHHHhccccCeecCCCCC--CCCCCcccCCceeEEccCccCCCCChH
Q 010860 175 WKKLAVLK-EFGEDAP----DLGIGDR---QTDHDFMSICKEGYMVLPSKS--AKPLPRDRLKSRIIFHDGRLVQRPDPL 244 (499)
Q Consensus 175 ~K~~~l~~-~~~~~~~----~~aygDS---~~D~pmL~~a~~~~~Vnp~~~--~~~~~~~~~~~~~~f~~~r~~~~~~~~ 244 (499)
.|.....+ .+|+..+ ++++||+ .+|.+++..|++.|+|+++++ |+++||.++++|++|||||++++|+|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~~~~~~~~~~p~~~~~~pliFHDGRL~~rPtp~ 271 (525)
T PLN02588 192 KKHELAFDKVVQEERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGRLAIKPTPL 271 (525)
T ss_pred chHHHHHHHHhcccCcccccceeecccCcccccchhHHhCcceEEeChhhccccccCCcccCCCceeEeCCcccCCCChH
Confidence 34444433 4554334 8899998 799999999999999999776 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhC-
Q 010860 245 NALITYIWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALG- 323 (499)
Q Consensus 245 ~~l~~~~~~p~~~~l~~~r~~~~~~~p~~~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~- 323 (499)
.++++++|+|+|++|+++|+.+++.+|.+++..+..++|++++++|..+.+. ..++|+|+||||+|++|++++...++
T Consensus 272 ~~l~~~~wlP~g~~La~~R~~~~~~lP~~~~~~~~~~~Gvrl~v~g~~p~~~-~~~~gvI~V~NH~S~LDPi~L~~Al~r 350 (525)
T PLN02588 272 NTLVLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISS-DRKKGCLFVCNHRTLLDPLYISYALRK 350 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHcCcEEEEEeCCCCCC-CCCCCEEEEECCcchhhHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999997653322 23579999999999999999999985
Q ss_pred CccceeeecccccccccccCCeeEeecCCHHHHHHHHHHhhCCCEEEecCCeecCCCcccccchhhhhcCCcEEEEEEee
Q 010860 324 RKVSCVTYSVSKLSRFLSPIPAIALTRDRAADAARISELLQKGDLVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNC 403 (499)
Q Consensus 324 ~~~~~v~~~v~k~~~~~~~~~~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~ 403 (499)
+++..+.+.+..+.+++.++++++++|++.++.+++++.+++|+++|||||||++++.+++||++++++.++||||+|++
T Consensus 351 r~I~~mtFsip~lg~lL~~i~ti~VdRdr~~D~~aI~~LLk~GdlVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~ 430 (525)
T PLN02588 351 KNIKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDS 430 (525)
T ss_pred CcceEEEEEhHHHHHHHHhcCceeecCCCcchHHHHHHHHhCCCEEEccCccccCCCcccChhhhHHHhcCceeeEEEEE
Confidence 44555444444445667788999999998778888999999999999999999999999999998888889999999999
Q ss_pred ccCCccccccCCcccccccccccCCCCeEEEEEccccCC--cccccC--CCCCHHHHHHHHHHHHHHhhCCcccCCCHHH
Q 010860 404 KQNMFYGTTVRGVKFWDPYFFFMNPRPTYEVTFLDRLPE--EMTCKA--GGKSAIEVANYVQKVLGDVLGFECTGLTRKD 479 (499)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~--~~~~~~--~~~~~~~la~~v~~~i~~~l~~~~~~~t~~d 479 (499)
..++|.+++..||++++++|++++|++.++|+|||+++. +..|.. .+++..++|++||..|+++||+++|++|.+|
T Consensus 431 ~~~~f~gtt~~g~k~~D~~~fl~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~d 510 (525)
T PLN02588 431 HVTFFYGTTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRD 510 (525)
T ss_pred eccccceeecCCCcccceeEEEecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhh
Confidence 999999988889999999999999999999999999996 323331 2688899999999999999999999999999
Q ss_pred HHHhhcCCCcccc
Q 010860 480 KYMLLGGNDGKVE 492 (499)
Q Consensus 480 k~~~l~~~~~~~~ 492 (499)
||+.|.||+|.|+
T Consensus 511 kY~~LaGndG~v~ 523 (525)
T PLN02588 511 KYLILAGNNGVVK 523 (525)
T ss_pred hhheecCCCcccC
Confidence 9999999999984
No 4
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=100.00 E-value=2e-34 Score=273.97 Aligned_cols=191 Identities=18% Similarity=0.215 Sum_probs=148.5
Q ss_pred CCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHh-h-----cCChhHHHHHHHHHHhcCCCHHH
Q 010860 19 AYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAY-L-----FISEAIGIQILIFISFSGLKIRD 92 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~-~-----~~~~~~~~~~~~~~~l~G~~~~~ 92 (499)
+.++|+|||||||+++||...|+.+.+ + +.+.+... ..|.+.... + ..++.. .+.+++.++.|+++++
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~~-~-~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~~~~~ 77 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFLL-R-HLPLNALL---VIPLLPIIAIALLIGGRAARWP-MSLLLWACTFGHREAH 77 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHHH-H-HhHHHHHH---HHHHHHHHHHhhcccccccchh-hHHHHHHHHcCCCHHH
Confidence 568999999999999999887777664 2 11212111 233332111 1 123333 3467788999999999
Q ss_pred HHHHHHHHhhhHHHh-hccHHHHH---HH-HhCC-CEEEEeCCcHHHHHHHHhhhcC---CcEEEeCeEEEecCCCceee
Q 010860 93 IELASRAVLPRFYAA-DVRKESYE---VF-DKCE-RKVVVTANPTLMVEPFVKDFLG---GDKVLGTEIEVNPRTKRATG 163 (499)
Q Consensus 93 l~~~~~~~~~~~~~~-~i~~~~~~---~~-~~~G-~vvlvSas~~~~v~~ia~~~lg---~d~vigt~l~~~~~~g~~tG 163 (499)
+++++++|.+.+... .++|.+.+ +| +++| +++|||||++.+++|+++. +| .+++|||+++++ +| |
T Consensus 78 l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i~t~le~~--~g---g 151 (210)
T TIGR01545 78 LQDLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLIASQIERG--NG---G 151 (210)
T ss_pred HHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEEEEEeEEe--CC---c
Confidence 999999998877554 46888877 34 4479 9999999999999999987 54 489999999987 66 8
Q ss_pred eEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCC
Q 010860 164 FVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLP 222 (499)
Q Consensus 164 ~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~ 222 (499)
++.|++ |+|++|+++|++|++.+ ..++|||||.||+|||+.|++|++||||.+++.++
T Consensus 152 ~~~g~~-c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~~~ 210 (210)
T TIGR01545 152 WVLPLR-CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQLE 210 (210)
T ss_pred eEcCcc-CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECcchHhcccC
Confidence 888865 59999999999999743 24679999999999999999999999999987653
No 5
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Probab=99.97 E-value=3e-31 Score=247.05 Aligned_cols=176 Identities=19% Similarity=0.233 Sum_probs=139.6
Q ss_pred HHHHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----cccC---
Q 010860 272 ERIVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSPI--- 343 (499)
Q Consensus 272 ~~~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~~--- 343 (499)
..|...+..++|+|++|+|.|++++ ++|+|+||||||.+|++.|..++|.. +..++| .++ ++|.
T Consensus 63 ~~~~~~~~y~~g~r~ev~g~E~L~~---~~p~ViVsNHQS~LDil~m~~i~p~~----cvviaK-r~L~yvp~~gl~m~L 134 (276)
T KOG2848|consen 63 KLWFHSMKYLLGLRFEVRGEENLPK---SKPAVIVSNHQSSLDILGMGSIWPKN----CVVIAK-RSLFYVPIFGLAMYL 134 (276)
T ss_pred HHHHHHHhhhcceEEEEechhhCCc---cCCeEEEecchhHHHHHHHHhhcCCc----eEEEEe-eeeeecchHHHHHHH
Confidence 4577888889999999999999986 46999999999999999999998654 345566 443 2332
Q ss_pred -CeeEeecCCH-HHHH---HHHHHhhCC--CEEEecCCeecCCCcccccchhhhh----cCCcEEEEEEeeccCCccccc
Q 010860 344 -PAIALTRDRA-ADAA---RISELLQKG--DLVVCPEGTTCRENFLLRFSALFAE----MSDRIVPVAVNCKQNMFYGTT 412 (499)
Q Consensus 344 -~~i~i~R~~~-~~~~---~~~~~l~~G--~l~IFPEGTrt~~~~l~~Fk~~~~~----~~~pVvPV~I~~~~~~~~~~~ 412 (499)
|.+||||.++ ++++ .+.+.++++ .++|||||||++++.++|||+++|. +++||+||+++....+++.
T Consensus 135 ~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~~-- 212 (276)
T KOG2848|consen 135 SGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYST-- 212 (276)
T ss_pred cCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEecccccccC--
Confidence 9999999664 4444 445566666 4999999999999999999977654 7899999999988776632
Q ss_pred cCCcccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCC
Q 010860 413 VRGVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGF 470 (499)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~ 470 (499)
.. ..++. +.+.|++||||++++. +.+|..+|++++|.+|.+.+..
T Consensus 213 --~~-------k~f~s-G~v~V~vL~pI~Tegl---T~ddv~~L~~~~R~~M~~~~~e 257 (276)
T KOG2848|consen 213 --KE-------KVFNS-GNVIVRVLPPIPTEGL---TKDDVDVLSDECRSAMLETFKE 257 (276)
T ss_pred --cc-------ceeec-ceEEEEEcCCCCccCC---CcccHHHHHHHHHHHHHHHHHH
Confidence 11 12333 5899999999999864 5678999999999999998743
No 6
>PRK11590 hypothetical protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=247.67 Aligned_cols=191 Identities=16% Similarity=0.204 Sum_probs=138.4
Q ss_pred CCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHh-hcCChh----HHHHHHHHHHhcCCCHHH
Q 010860 18 SAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAY-LFISEA----IGIQILIFISFSGLKIRD 92 (499)
Q Consensus 18 ~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~-~~~~~~----~~~~~~~~~~l~G~~~~~ 92 (499)
.++++++|||||||+.+++...+..... +... +.... ..+...... .+.... .....+++..+.|+++++
T Consensus 4 ~~~k~~iFD~DGTL~~~d~~~~~~~~~~-~~~g-~~~~~---~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 78 (211)
T PRK11590 4 HERRVVFFDLDGTLHQQDMFGSFLRYLL-RRQP-LNLLL---VLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEAR 78 (211)
T ss_pred ccceEEEEecCCCCcccchHHHHHHHHH-Hhcc-hhhHH---HhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHH
Confidence 3788999999999998777655544432 2222 11111 111211111 122111 111244566677999999
Q ss_pred HHHHHHHHhhhHHHh-hccHHHHH---HH-HhCC-CEEEEeCCcHHHHHHHHhhhcC---CcEEEeCeEEEecCCCceee
Q 010860 93 IELASRAVLPRFYAA-DVRKESYE---VF-DKCE-RKVVVTANPTLMVEPFVKDFLG---GDKVLGTEIEVNPRTKRATG 163 (499)
Q Consensus 93 l~~~~~~~~~~~~~~-~i~~~~~~---~~-~~~G-~vvlvSas~~~~v~~ia~~~lg---~d~vigt~l~~~~~~g~~tG 163 (499)
+++++++|.+.+... ..+|.+.+ +| +++| +++|||||++.+++++++. +| ++++|||++++ ++||
T Consensus 79 ~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~~~~~i~t~l~~-----~~tg 152 (211)
T PRK11590 79 LQALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLPRVNLIASQMQR-----RYGG 152 (211)
T ss_pred HHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccccCceEEEEEEE-----EEcc
Confidence 999999986654221 34677766 33 4578 9999999999999999999 99 59999999975 5899
Q ss_pred eEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCeecCCCCCCCC
Q 010860 164 FVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYMVLPSKSAKP 220 (499)
Q Consensus 164 ~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~ 220 (499)
++.|++ |+|++|+++|++|++.+ ..++|||||.||+|||+.|++|++|||++++..
T Consensus 153 ~~~g~~-c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~ 209 (211)
T PRK11590 153 WVLTLR-CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ 209 (211)
T ss_pred EECCcc-CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence 999976 59999999999999743 246899999999999999999999999998764
No 7
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.97 E-value=1.5e-29 Score=239.34 Aligned_cols=193 Identities=20% Similarity=0.224 Sum_probs=150.2
Q ss_pred EEEEecCCceeecCCchHHHHHHHHHhcchH-HHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010860 22 SIAADLDGTLLVSRSSFPYFMLVAVEAGGLL-RGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASRAV 100 (499)
Q Consensus 22 ~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~-r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~~~ 100 (499)
+|+|||||||++++|++.|+.+... ++... +............+..+..+.....+.++...++|++.+++++++++|
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 79 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLAS-KNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEF 79 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4899999999999999888877643 33222 211111111111111111223333445667789999999999999999
Q ss_pred hhhHHHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhH
Q 010860 101 LPRFYAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWK 176 (499)
Q Consensus 101 ~~~~~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K 176 (499)
+++.+...++|++.+ .|+++| +++|+|+|++.++++++++ +|+++++|+++.+.+ +|++||++.+++ |.|++|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~~~~-~g~~~g~~~~~~-~~g~~K 156 (202)
T TIGR01490 80 VNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLEESE-DGIYTGNIDGNN-CKGEGK 156 (202)
T ss_pred HHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceEEcC-CCEEeCCccCCC-CCChHH
Confidence 998877788888776 678999 9999999999999999998 999999999998732 899999999865 599999
Q ss_pred HHHHHHHhCCC----CCeEEEeCCcCcHHHHhccccCeecCCCCCC
Q 010860 177 KLAVLKEFGED----APDLGIGDRQTDHDFMSICKEGYMVLPSKSA 218 (499)
Q Consensus 177 ~~~l~~~~~~~----~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~ 218 (499)
+.+++++++.. ..+++||||.+|+||++.|+++++|||++++
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l 202 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL 202 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence 99999887532 2478999999999999999999999999864
No 8
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.96 E-value=4.1e-30 Score=245.12 Aligned_cols=189 Identities=23% Similarity=0.303 Sum_probs=143.8
Q ss_pred HHHh-hcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----ccc----CCeeE
Q 010860 278 TYEM-LGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSP----IPAIA 347 (499)
Q Consensus 278 ~~~~-~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~----~~~i~ 347 (499)
++++ .|++++|+|.+++| ++|+|+||||+|++|++++.+.. + ..+++| .++ +++ .|+++
T Consensus 4 ~~~~~~~~~~~v~g~~~~p----~~~~iiv~NH~S~~D~~~l~~~~--~----~~fv~k-~el~~~p~~g~~~~~~g~i~ 72 (211)
T cd07991 4 LLFAFGFYVIKVHGKPDPP----EAPRIIVANHTSFIDPLILFSDL--F----PSIVAK-KELGKLPFIGTILRALGCIF 72 (211)
T ss_pred EEEEEEEEEEEEECCCCCC----CCCeEEEECCCcHHHHHHHhhhc--C----cEEEEe-hhhccCcHHHHHHHhCCceE
Confidence 3444 56899999999986 37899999999999999999983 3 234555 332 233 39999
Q ss_pred eecCCH----HHHHHHHHHhhC--C-CEEEecCCeecCCCcccccchhhhhcCCcEEEEEEeeccCCcccccc-CCcccc
Q 010860 348 LTRDRA----ADAARISELLQK--G-DLVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNCKQNMFYGTTV-RGVKFW 419 (499)
Q Consensus 348 i~R~~~----~~~~~~~~~l~~--G-~l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~~~~~~~~~~~-~~~~~~ 419 (499)
|+|++. +..+.+.+.+++ | +|+||||||||+++.+++||++++.+++|||||+|+|+......... .+...+
T Consensus 73 v~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~ 152 (211)
T cd07991 73 VDRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSL 152 (211)
T ss_pred EeCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHH
Confidence 999764 345677777774 5 49999999999999999999888889999999999998642111011 111112
Q ss_pred ccccccc-CCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCCCHHHHH
Q 010860 420 DPYFFFM-NPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGLTRKDKY 481 (499)
Q Consensus 420 ~~~~~~~-~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk~ 481 (499)
.++|.++ .+..+++|+|+|||+++ . ++++++++++++|+.|++.|+.+.+++|.+||+
T Consensus 153 ~~l~~~l~~~~~~v~v~~l~pi~~~-~---~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~~ 211 (211)
T cd07991 153 MYLFRLLTQPANVLEVEFLPVYTPS-E---EGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211 (211)
T ss_pred HHHHHHhCCcceEEEEEECCCcccc-c---CCCCHHHHHHHHHHHHHHhcCCCccCCCCcccC
Confidence 3344333 34458999999999984 1 468999999999999999999999999999984
No 9
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.4e-28 Score=233.62 Aligned_cols=192 Identities=20% Similarity=0.193 Sum_probs=143.9
Q ss_pred CCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 010860 18 SAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELAS 97 (499)
Q Consensus 18 ~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~ 97 (499)
..+++++|||||||++ ...+.++...+ +. ........... +....+....+ +.....++|++.++++++.
T Consensus 3 ~~~~L~vFD~D~TLi~-~~~~~~~~~~~---g~--~~~v~~~t~~~---~~~~~~~~~~~-~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-AELIDELARGA---GV--GEEVLAITERA---MRGELDFEESL-RLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh-HHHHHHHHHHh---CC--HHHHHHHHHHH---hcccccHHHHH-HHHHHHhCCCCHHHHHHHH
Confidence 4678999999999999 33344333321 11 11111011111 11122223223 3345689999999999988
Q ss_pred HHHhhhHHHhhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccc
Q 010860 98 RAVLPRFYAADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVG 173 (499)
Q Consensus 98 ~~~~~~~~~~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g 173 (499)
++| ..++|.+. ++|+++| +|+|||||++++++|+++. ||+|+++|++++.+ ||++||++.++. |.+
T Consensus 73 ~~~------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~--dG~ltG~v~g~~-~~~ 142 (212)
T COG0560 73 EEF------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEID--DGKLTGRVVGPI-CDG 142 (212)
T ss_pred Hhc------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEe--CCEEeceeeeee-cCc
Confidence 887 34555555 4899999 9999999999999999999 99999999999998 899999999965 599
Q ss_pred hhHHHHHHHHhCCC----CCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCcccCCce
Q 010860 174 KWKKLAVLKEFGED----APDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPRDRLKSR 229 (499)
Q Consensus 174 ~~K~~~l~~~~~~~----~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~~~~~~~ 229 (499)
++|+.++++++... ..++|||||.||+|||+.|++++++||+++.........|..
T Consensus 143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcChh
Confidence 99999999987521 258999999999999999999999999998877766555543
No 10
>PLN02833 glycerol acyltransferase family protein
Probab=99.96 E-value=9.3e-28 Score=244.49 Aligned_cols=191 Identities=19% Similarity=0.268 Sum_probs=137.7
Q ss_pred HHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeee-cccccccc----cccCCeeEe
Q 010860 274 IVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTY-SVSKLSRF----LSPIPAIAL 348 (499)
Q Consensus 274 ~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~-~v~k~~~~----~~~~~~i~i 348 (499)
+++.++...+..++++|.++.+ ++++|+||||+|++|++++.+..+.. .+.. .....+.+ +...|+++|
T Consensus 140 ~~~~~~~~~~~~i~v~G~e~~~----~~~~IiVaNH~S~lDi~vL~s~~p~~--~v~kk~~~~~~~~~~~~~~~~g~I~V 213 (376)
T PLN02833 140 ICSAFVASWTGVIKYHGPRPSR----RPKQVFVANHTSMIDFIVLEQMTPFA--VIMQKHPGWVGFLQNTILESVGCIWF 213 (376)
T ss_pred HHHHHHHHhEEEEEEECCcCCC----CCCEEEEECCCChHHHHHHHhhcCce--EEEEehhhhhHHHHHHHHHHcCcEEe
Confidence 3344444555678999988754 36899999999999999999987432 1111 11111111 233589999
Q ss_pred ecCCHHHH----HHHHHHhh--CCC-EEEecCCeecCCCcccccchhhhhcCCcEEEEEEeeccCCcccccc-CCccccc
Q 010860 349 TRDRAADA----ARISELLQ--KGD-LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNCKQNMFYGTTV-RGVKFWD 420 (499)
Q Consensus 349 ~R~~~~~~----~~~~~~l~--~G~-l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~~~~~~~~~~~-~~~~~~~ 420 (499)
||++.++. +.+++.++ +|. |+||||||||+++.+++||++++++++|||||+|+|+......... ....+..
T Consensus 214 dR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~ 293 (376)
T PLN02833 214 NRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTM 293 (376)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHH
Confidence 99764443 34555555 574 9999999999999999999999999999999999988543211111 1234556
Q ss_pred ccccccCCCC-eEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCC
Q 010860 421 PYFFFMNPRP-TYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGL 475 (499)
Q Consensus 421 ~~~~~~~~~~-~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~ 475 (499)
++|.++.... .++|+|+||++.+ ++++++++++++++.|++++|++....
T Consensus 294 ~l~~ll~~~~~~v~V~~LpPi~~~-----~~e~~~efA~rv~~~Ia~~lgi~~~~w 344 (376)
T PLN02833 294 HLLRLMTSWAVVCDVWYLEPQTLR-----PGETPIEFAERVRDMIAKRAGLKKVPW 344 (376)
T ss_pred hHHHHhCCCceEEEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHhcCCCCCCC
Confidence 6666555444 8999999999875 468999999999999999999886653
No 11
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=99.96 E-value=2.2e-27 Score=230.33 Aligned_cols=171 Identities=18% Similarity=0.231 Sum_probs=129.8
Q ss_pred HHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----ccc----CC
Q 010860 274 IVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSP----IP 344 (499)
Q Consensus 274 ~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~----~~ 344 (499)
+.+.++.++|++++++|.|++|+ ++|+|+||||+|++|++++...++++ ..+++| .|+ ++| .|
T Consensus 41 ~~~~~~~~~g~~v~v~g~e~~p~---~~~~IivaNH~S~lD~~~l~~~~~~~----~~fvaK-~el~~~P~~g~~~~~~g 112 (245)
T PRK15018 41 MFGRLAPLFGLKVECRKPADAES---YGNAIYIANHQNNYDMVTASNIVQPP----TVTVGK-KSLLWIPFFGQLYWLTG 112 (245)
T ss_pred HHHHHHHHcCeEEEEEccCCCCC---CCCEEEEECCCchHHHHHHHHHhCCC----cEEEEe-HHHhhCCHHHHHHHhCC
Confidence 45556678999999999999874 57999999999999999998877544 235555 333 233 38
Q ss_pred eeEeecCCH-HH---HHHHHHHhhC-CC-EEEecCCeecCCCcccccchhhh----hcCCcEEEEEEeeccCCccccccC
Q 010860 345 AIALTRDRA-AD---AARISELLQK-GD-LVVCPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVR 414 (499)
Q Consensus 345 ~i~i~R~~~-~~---~~~~~~~l~~-G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~ 414 (499)
+++|||++. ++ ++.+.+.+++ |. ++||||||||+++.+.+||++++ ++++||+||+|.++...++
T Consensus 113 ~i~VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~----- 187 (245)
T PRK15018 113 NLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKIN----- 187 (245)
T ss_pred CeEEeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECcccccc-----
Confidence 999999764 33 3445556654 64 99999999999999999996654 4899999999998754321
Q ss_pred CcccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhC
Q 010860 415 GVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLG 469 (499)
Q Consensus 415 ~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~ 469 (499)
. +. +.+ .+++|+++|||+++++ +.++.+++++++++.|++.+.
T Consensus 188 ~-------~~-~~~-g~i~v~~~~PI~~~~~---~~~~~~~l~~~v~~~i~~~~~ 230 (245)
T PRK15018 188 L-------NR-LHN-GLVIVEMLPPIDVSQY---GKDQVRELAAHCRSIMEQKIA 230 (245)
T ss_pred c-------CC-ccC-eeEEEEEcCCCcCCCC---ChhhHHHHHHHHHHHHHHHHH
Confidence 0 11 122 3899999999999754 346789999999999998763
No 12
>PTZ00261 acyltransferase; Provisional
Probab=99.89 E-value=2.1e-22 Score=200.35 Aligned_cols=152 Identities=15% Similarity=0.101 Sum_probs=105.1
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----ccc----CCeeEeecCCH---------HH----HH
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSP----IPAIALTRDRA---------AD----AA 357 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~----~~~i~i~R~~~---------~~----~~ 357 (499)
.+|+|+++||+|++|++++.++++.....-..+++| .|+ ++| .|+++|+|++. +. .+
T Consensus 128 ~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAK-kELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~ 206 (355)
T PTZ00261 128 RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMK-SSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQ 206 (355)
T ss_pred CCCEEEEECCCchHHHHHHHHHcccccccccEEEEH-HHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHH
Confidence 368999999999999999999986310001345666 444 333 38999998431 11 22
Q ss_pred HHHHHhhCCC-EEEecCCeecCCC-cccccchhhh----hcCCcEEEEEEeeccCCccccccCCcccccccccccCCCCe
Q 010860 358 RISELLQKGD-LVVCPEGTTCREN-FLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMNPRPT 431 (499)
Q Consensus 358 ~~~~~l~~G~-l~IFPEGTrt~~~-~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (499)
.+++.+++|. ++||||||||.++ .+++||.|++ ++++||+|+++.++...+. .+. .++...++
T Consensus 207 ~~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP----~g~-------~l~~~pg~ 275 (355)
T PTZ00261 207 AIDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWP----WWM-------MIGGLPAD 275 (355)
T ss_pred HHHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCC----CCC-------ccCCCCce
Confidence 4457889995 9999999999865 5999996654 3799999999999875442 121 11222248
Q ss_pred EEEEEcc-ccCCcccccCCCCCHHHHHHHHHHHHHHhhC
Q 010860 432 YEVTFLD-RLPEEMTCKAGGKSAIEVANYVQKVLGDVLG 469 (499)
Q Consensus 432 v~v~~l~-pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~ 469 (499)
++|+|++ ||+++ +.+.+++++++++.|++..+
T Consensus 276 I~V~iG~~PI~~~------~~~~~eL~~~lr~lmqe~~~ 308 (355)
T PTZ00261 276 MHIRIGAYPIDYD------RDSSKDVAVGLQQRMQKVRD 308 (355)
T ss_pred EEEEECCCCCCCC------CCCHHHHHHHHHHHHHHHHH
Confidence 9999999 99975 35666666666666665543
No 13
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.88 E-value=5.7e-22 Score=189.34 Aligned_cols=163 Identities=23% Similarity=0.266 Sum_probs=122.4
Q ss_pred hhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----ccc----CCeeEeecC
Q 010860 281 MLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSP----IPAIALTRD 351 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~----~~~i~i~R~ 351 (499)
.++++++++|.+++|. .++|+|+||||+|++|++++.+. .++ ..+++| .++ ++| .|+++|+|+
T Consensus 32 ~~~~~~~v~g~e~lp~--~~~p~iiv~NH~S~~D~~~l~~~-~~~----~~~v~k-~~l~~~P~~g~~~~~~~~i~v~R~ 103 (214)
T PLN02901 32 SPFYKIEVEGLENLPS--PDEPAVYVSNHQSFLDIYTLFHL-GRP----FKFISK-TSIFLIPIIGWAMYMTGHIPLKRM 103 (214)
T ss_pred hcceeEEEECCccCCC--CCCcEEEEECCCCchHHHHHhhc-CCc----eEEEEE-HHhhhccHHHHHHHHCCcEEEecC
Confidence 3688999999999874 25799999999999999988754 344 235555 332 233 389999996
Q ss_pred CH----HHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhh----hcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 352 RA----ADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 352 ~~----~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+. +.++.+.+.+++|. ++||||||++.++.+.+|+.+++ ..++||+||++.|+...+. .+..
T Consensus 104 ~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~~----~~~~----- 174 (214)
T PLN02901 104 DRRSQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIMP----NGKE----- 174 (214)
T ss_pred CcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhCc----CCCc-----
Confidence 53 23456778888996 99999999998888999996543 3799999999998764331 1211
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCC
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGF 470 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~ 470 (499)
+.+.+ .+++|++++||++ .+.+++++++++.|.+.++.
T Consensus 175 -~~~~~-~~i~v~~~~pi~~--------~~~~~l~~~~~~~i~~~~~~ 212 (214)
T PLN02901 175 -GILNP-GSVKVVIHPPIEG--------SDADELCNEARKVIAESLVQ 212 (214)
T ss_pred -ccccC-CeEEEEECCCcCC--------CCHHHHHHHHHHHHHHHhhh
Confidence 11222 3799999999986 36789999999999998754
No 14
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.87 E-value=1.4e-21 Score=185.21 Aligned_cols=171 Identities=22% Similarity=0.282 Sum_probs=122.6
Q ss_pred HHHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCC-CCChHHHHHHHhCCccceeee-cccccccccc----cCCee
Q 010860 273 RIVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHR-TPLDPIVIAIALGRKVSCVTY-SVSKLSRFLS----PIPAI 346 (499)
Q Consensus 273 ~~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~-S~lD~~~l~~~~~~~~~~v~~-~v~k~~~~~~----~~~~i 346 (499)
.|++.++++++.+++|+|.+++|+ ++|+|+|+||+ |++|++++.++.+++...+.. .+.+ ..+++ .+|++
T Consensus 3 ~~~~~~~~~~~~~v~v~G~e~lp~---~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~-~p~~~~~~~~~g~i 78 (203)
T cd07992 3 LLSRVILRIYFRRITVVGRENVPK---DGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFK-NPLIGWLLESFGAI 78 (203)
T ss_pred EehhehhhhEeeeeEEECCccCCC---CCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhcc-chHHHHHHHHcCce
Confidence 367888888999999999999975 58999999999 689999999887656332222 1111 12223 34899
Q ss_pred EeecCC------------HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhh----------hcCCcEEEEEEee
Q 010860 347 ALTRDR------------AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFA----------EMSDRIVPVAVNC 403 (499)
Q Consensus 347 ~i~R~~------------~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----------~~~~pVvPV~I~~ 403 (499)
+|+|++ .+..+.+.+.+++|. ++|||||||+.++.+.+||.+++ .+++||+||+|.|
T Consensus 79 pI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~~ 158 (203)
T cd07992 79 PVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLNY 158 (203)
T ss_pred EeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEEe
Confidence 999954 234567788999996 99999999998888999996543 1589999999988
Q ss_pred ccCCccccccCCcccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 404 KQNMFYGTTVRGVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
+... .++++++|.+++||.++++. +.++..+..+.+.+++.++|
T Consensus 159 ~~~~-------------------~~~~~i~i~~g~pi~~~~~~--~~~~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 159 EDKS-------------------RFRSRVLVEFGKPISVSAFE--EAEASRDVEKKLINQLEAEL 202 (203)
T ss_pred CCCC-------------------CCCCeEEEEECCCccccccc--ccccchhHHHHHHHHHHHhh
Confidence 6421 12347999999999987542 22344444445555555544
No 15
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.84 E-value=1.1e-20 Score=179.99 Aligned_cols=171 Identities=16% Similarity=0.157 Sum_probs=113.0
Q ss_pred EEEEEcCCCCCCCCCCCCCeEEEecCCC-CChHHHHHHHhCCccceeeecccccccc-----cccCCeeEeecCCH----
Q 010860 284 IHLVIRGNPPPAPSSGSPGNLYVCNHRT-PLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSPIPAIALTRDRA---- 353 (499)
Q Consensus 284 i~v~v~G~~~~p~~~~~~p~iiVaNH~S-~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~~~~i~i~R~~~---- 353 (499)
++++|+|.|++|+ ++|+|+||||+| ++|++++.+++... .....+++| .++ ++++ .++|+|.+.
T Consensus 8 ~~v~v~G~e~lp~---~g~~iiv~NH~s~~~D~~~l~~~~~~~-~~~~~~lak-~~l~~~p~l~~~-~i~v~r~~~~~~~ 81 (210)
T cd07986 8 LEVDVSGLENIPK---DGPVVIVANHPFGILDGLILADLLGSV-RPDVRILAN-QLLSKIPELRDL-FIPVDPLEGRAAL 81 (210)
T ss_pred EEEecCchhcCCC---CCCEEEEEcCCccchHHHHHHHHHHHh-CCCeEEEeH-HhhhhCcchHhh-EEeccCCCCcchh
Confidence 3889999999985 589999999987 59999998665210 001345555 333 2232 688888532
Q ss_pred ----HHHHHHHHHhhCCC-EEEecCCeecCCCc------ccccchhhh----hcCCcEEEEEEeeccCC-ccccccCCcc
Q 010860 354 ----ADAARISELLQKGD-LVVCPEGTTCRENF------LLRFSALFA----EMSDRIVPVAVNCKQNM-FYGTTVRGVK 417 (499)
Q Consensus 354 ----~~~~~~~~~l~~G~-l~IFPEGTrt~~~~------l~~Fk~~~~----~~~~pVvPV~I~~~~~~-~~~~~~~~~~ 417 (499)
+.++.+.+.|++|. ++|||||||+.++. +.+||.+++ ++++||+||+|.++... ++... .-+.
T Consensus 82 ~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~-~~~~ 160 (210)
T cd07986 82 AKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAG-LIHP 160 (210)
T ss_pred hhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHH-ccCH
Confidence 33557778899996 99999999997543 689996554 37999999999986421 11000 0000
Q ss_pred ccc---cccc-ccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHH
Q 010860 418 FWD---PYFF-FMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKV 463 (499)
Q Consensus 418 ~~~---~~~~-~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~ 463 (499)
-.. ..+. +.....+++|++++||+++++. ..++.+++++.+|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~v~~g~pI~~~~~~--~~~~~~~l~~~~~~~ 208 (210)
T cd07986 161 TLRTLLLPRELLNKRGKTIRIRVGRPIPPEELA--RFEDAEELADFLRLH 208 (210)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCcCCHHHHh--cCCCHHHHHHHHHHh
Confidence 000 0010 1112348999999999987641 246899999999974
No 16
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=7.8e-20 Score=214.85 Aligned_cols=171 Identities=16% Similarity=0.173 Sum_probs=122.9
Q ss_pred hcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---------cccCCeeEeecCC
Q 010860 282 LGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---------LSPIPAIALTRDR 352 (499)
Q Consensus 282 ~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---------~~~~~~i~i~R~~ 352 (499)
..++++++|.|++|+ +++|+|+||||+|++|++++.+.+|+++ .+++| +|+ +...|+++|||++
T Consensus 437 ~~~~~~~~g~~~~~~--~~~~~i~~~nH~s~~D~~~l~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~ 509 (1140)
T PRK06814 437 AFYRVEVKGLENLQK--AGKKAVIAANHVSFLDGPLLAAYLPEEP----TFAID-TDIAKAWWVKPFLKLAKALPVDPTN 509 (1140)
T ss_pred HeEEEEEeCCccccc--cCCCEEEEECCcchHHHHHHHHhCCCCe----EEEEe-HHHhhhhHHHHHHHhcCeeecCCCC
Confidence 468999999999985 2357999999999999999999998763 34555 333 2334999999988
Q ss_pred HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhh----hcCCcEEEEEEeeccCCccccccCCcccccccccccC
Q 010860 353 AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMN 427 (499)
Q Consensus 353 ~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (499)
.+..+.+.+.+++|. ++|||||||++++.+.+||++++ ++++||+||+|.++...... ..+.++ . ..
T Consensus 510 ~~~~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~--~~~~~~-----~-~~ 581 (1140)
T PRK06814 510 PMATRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFS--RLKNQV-----R-RK 581 (1140)
T ss_pred hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCccccccc--ccCCCc-----c-cc
Confidence 877888889999996 99999999999999999996653 48999999999987532100 001010 0 01
Q ss_pred CCCeEEEEEccccCCcccccC-CCCCHHHHHHHHHHHHHHh
Q 010860 428 PRPTYEVTFLDRLPEEMTCKA-GGKSAIEVANYVQKVLGDV 467 (499)
Q Consensus 428 ~~~~v~v~~l~pi~~~~~~~~-~~~~~~~la~~v~~~i~~~ 467 (499)
.+++++++++|||.++..... ..+.++.+.+.+++.|.+.
T Consensus 582 ~~~~~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~ 622 (1140)
T PRK06814 582 WFPKVTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDM 622 (1140)
T ss_pred cCCceEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 124799999999987543111 1233445666666666554
No 17
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.83 E-value=6.6e-20 Score=173.30 Aligned_cols=172 Identities=17% Similarity=0.202 Sum_probs=120.6
Q ss_pred CeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHH-HHHHHHhcCCCHHHHHHHHH
Q 010860 20 YGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQ-ILIFISFSGLKIRDIELASR 98 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~l~G~~~~~l~~~~~ 98 (499)
|++|+|||||||+++ .|..++.. .+. ..... . .....+.....+ ++-..-..|++.++++++.+
T Consensus 1 ~~la~FDlD~TLi~~--~w~~~~~~---~g~--~~~~~-------~-~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~ 65 (203)
T TIGR02137 1 MEIACLDLEGVLVPE--IWIAFAEK---TGI--DALKA-------T-TRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA 65 (203)
T ss_pred CeEEEEeCCcccHHH--HHHHHHHH---cCC--cHHHH-------H-hcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 689999999999985 35444432 231 11000 0 111111111111 22111234999999966554
Q ss_pred HHhhhHHHhhccHHHH---HHHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCC-CceeeeEecCCcccch
Q 010860 99 AVLPRFYAADVRKESY---EVFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRT-KRATGFVKRPGVLVGK 174 (499)
Q Consensus 99 ~~~~~~~~~~i~~~~~---~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~-g~~tG~~~~~~~~~g~ 174 (499)
.. .++|.+. +.|+++|+++||||+++.++++++++ +|+++++|++++++ + |++||.... .++
T Consensus 66 ~i-------~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~--~~g~~tG~~~~----~~~ 131 (203)
T TIGR02137 66 TL-------KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEID--DSDRVVGYQLR----QKD 131 (203)
T ss_pred hC-------CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEe--cCCeeECeeec----Ccc
Confidence 31 2455554 46777679999999999999999999 99999999999998 6 999997642 567
Q ss_pred hHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCCCCCCC
Q 010860 175 WKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPSKSAKP 220 (499)
Q Consensus 175 ~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~ 220 (499)
+|...++++......+++||||.||+||++.|+.+++.++++....
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~ 177 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIR 177 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHH
Confidence 8988888774322368999999999999999999999999986543
No 18
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.83 E-value=1.9e-20 Score=171.02 Aligned_cols=140 Identities=18% Similarity=0.218 Sum_probs=98.3
Q ss_pred HHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHh---CCccceeeeccccccccc----cc----CC
Q 010860 276 RYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIAL---GRKVSCVTYSVSKLSRFL----SP----IP 344 (499)
Q Consensus 276 ~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~---~~~~~~v~~~v~k~~~~~----~~----~~ 344 (499)
+.+++++|++++ |. +|. +++|+|+||||+|++|++++.+.+ +++ ..+++| .++. +| .|
T Consensus 2 ~~~~~~~g~~~~--g~--~p~--~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~----~~~vak-~~l~~~p~g~~~~~~g 70 (163)
T cd07988 2 RLLLRLSGWRIE--GE--PPN--KPKFVVIGAPHTSNWDFVLGLLAAFALGLK----ISFLGK-HSLFKPPLGPFMRWLG 70 (163)
T ss_pred ceEEEecCEEEE--eE--cCC--CCceEEEEECCCccHHHHHHHHHHHhcCCc----eEEEEE-HHhhhCcHHHHHHHcC
Confidence 345667888765 43 332 136899999999999999988763 344 234554 2321 33 49
Q ss_pred eeEeecCC-HHHHHHHHHHhhCC---CEEEecCCeecCCCcccccchhh----hhcCCcEEEEEEeeccCCccccccCCc
Q 010860 345 AIALTRDR-AADAARISELLQKG---DLVVCPEGTTCRENFLLRFSALF----AEMSDRIVPVAVNCKQNMFYGTTVRGV 416 (499)
Q Consensus 345 ~i~i~R~~-~~~~~~~~~~l~~G---~l~IFPEGTrt~~~~l~~Fk~~~----~~~~~pVvPV~I~~~~~~~~~~~~~~~ 416 (499)
+++|+|++ .+..+++.+.+++| .++|||||||+++ .+||+++ .++++||+||+|+++
T Consensus 71 ~i~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~------------ 135 (163)
T cd07988 71 GIPVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYK------------ 135 (163)
T ss_pred CEEeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecC------------
Confidence 99999965 34677888888865 3999999999985 3899654 348999999999764
Q ss_pred ccccccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHH
Q 010860 417 KFWDPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQK 462 (499)
Q Consensus 417 ~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~ 462 (499)
..+|+|+|||++++ +.+++.+++++
T Consensus 136 --------------~~~v~~g~pi~~~~-------~~~~~~~~l~~ 160 (163)
T cd07988 136 --------------RKTVGIGPLFEPSG-------DIEADLAAIRA 160 (163)
T ss_pred --------------cEEEEECCcCcCCC-------CHHHHHHHHHH
Confidence 14789999999863 33445555554
No 19
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.83 E-value=1.1e-19 Score=177.78 Aligned_cols=149 Identities=27% Similarity=0.355 Sum_probs=109.0
Q ss_pred HHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeeccccccc-----cccc----CC
Q 010860 274 IVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSR-----FLSP----IP 344 (499)
Q Consensus 274 ~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~-----~~~~----~~ 344 (499)
+.+.++..++.+++|+|.|++|. ++|+|+||||+|++|++++.+..+.+. -.+|++| .+ ++++ .|
T Consensus 40 ~~~~~~~~~~~r~~v~G~e~lp~---~~~~ivvaNH~S~~D~~~l~~~~~~~~--~~~f~~k-~~l~~~p~~g~~~~~~~ 113 (255)
T COG0204 40 LVLLLLLLFGLRVEVEGLENLPK---GGPALVVANHQSFLDPLLLSLALPRRG--PVRFVAK-KELFKVPLLGWLLRLLG 113 (255)
T ss_pred HHHHHHHHhCceEEEEeeecCCC---CCCEEEEECchhhhhHHHHhhhcCCCc--ceEEEee-hhhccCchHHHHHHHcC
Confidence 45667778999999999999985 589999999999999999999986552 1345555 22 2333 39
Q ss_pred eeEeecCCHH--HHH-HHHHHhhCCC-EEEecCCeecCC-Ccccccchhhh----hcCCcEEEEEEeeccCCccccccCC
Q 010860 345 AIALTRDRAA--DAA-RISELLQKGD-LVVCPEGTTCRE-NFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRG 415 (499)
Q Consensus 345 ~i~i~R~~~~--~~~-~~~~~l~~G~-l~IFPEGTrt~~-~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~ 415 (499)
+++++|++.. ... .++...++|. ++|||||||+++ ..+.+||.++. .+++||+||++.|+...+. ..
T Consensus 114 ~i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~----~~ 189 (255)
T COG0204 114 AIPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFP----SL 189 (255)
T ss_pred eeEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCccccc----CC
Confidence 9999997642 333 4444444565 999999999996 45999995433 4789999999999864331 00
Q ss_pred cccccccccccCCCCeEEEEEccccCCcc
Q 010860 416 VKFWDPYFFFMNPRPTYEVTFLDRLPEEM 444 (499)
Q Consensus 416 ~~~~~~~~~~~~~~~~v~v~~l~pi~~~~ 444 (499)
....+.+++++|+..+.
T Consensus 190 ------------~~~~~~~~~~~pi~~~~ 206 (255)
T COG0204 190 ------------KKGKVKVRIGPPIDISA 206 (255)
T ss_pred ------------CceeEEEEecCCcCccc
Confidence 11128999999998764
No 20
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.82 E-value=1.5e-19 Score=202.77 Aligned_cols=175 Identities=15% Similarity=0.199 Sum_probs=120.5
Q ss_pred EEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceee-ecccccccccc----cCCeeEeecCCHHHHHH
Q 010860 284 IHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVT-YSVSKLSRFLS----PIPAIALTRDRAADAAR 358 (499)
Q Consensus 284 i~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~-~~v~k~~~~~~----~~~~i~i~R~~~~~~~~ 358 (499)
++++++|.+++|+ ++|+|+||||+|++|++++.+++++...++. ..+.+ ..+++ ..|+++|+|++...+++
T Consensus 14 ~~~~v~g~~~~~~---~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~-~~~~~~~~~~~~~i~v~r~~~~~~~~ 89 (718)
T PRK08043 14 YRVRVTGDTQALK---GERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQ-QWYMRWLKPYIDFVPLDPTKPMAIKH 89 (718)
T ss_pred EEEEEEccccCCC---CCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhh-hHHHHHHHHhCCEEEecCCCHHHHHH
Confidence 3566889998875 4789999999999999999999864422211 12222 12222 34899999988778888
Q ss_pred HHHHhhCCC-EEEecCCeecCCCcccccchhhh----hcCCcEEEEEEeeccCCccccccCCcccccccccccCCCCeEE
Q 010860 359 ISELLQKGD-LVVCPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMNPRPTYE 433 (499)
Q Consensus 359 ~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 433 (499)
+.+.+++|. |+|||||||+.++.+.+||.+++ .+++||+||+|.++...... +...... . ...+.+.
T Consensus 90 ~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~---~~~~~~~---~--~~~~~i~ 161 (718)
T PRK08043 90 LVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFS---RLKGLVK---R--RLFPQIT 161 (718)
T ss_pred HHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCccc---ccCCccc---c--ccCCceE
Confidence 888999995 99999999999999999996543 37999999999987431100 0000000 0 1123689
Q ss_pred EEEccccCCccccc-CCCCCHHHHHHHHHHHHHHhhCC
Q 010860 434 VTFLDRLPEEMTCK-AGGKSAIEVANYVQKVLGDVLGF 470 (499)
Q Consensus 434 v~~l~pi~~~~~~~-~~~~~~~~la~~v~~~i~~~l~~ 470 (499)
++|++|++...... .+.++.+.+++++++.|.+.+..
T Consensus 162 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (718)
T PRK08043 162 LHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMA 199 (718)
T ss_pred EEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999865421100 02245677899999999888743
No 21
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.81 E-value=1.3e-19 Score=181.72 Aligned_cols=176 Identities=18% Similarity=0.187 Sum_probs=112.7
Q ss_pred HHHHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHH-----HhC-Cccceeeecccccccc--------
Q 010860 274 IVRYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAI-----ALG-RKVSCVTYSVSKLSRF-------- 339 (499)
Q Consensus 274 ~~~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~-----~~~-~~~~~v~~~v~k~~~~-------- 339 (499)
|.+.+...+|++++++|.|++|+ ++++|+++||+|.+|+.++.. .++ ++ ..+++| .++
T Consensus 77 i~~~~~~~~~~~v~v~g~e~l~~---~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~----~~~lak-~~lf~iP~~g~ 148 (315)
T PLN02783 77 ICKYACAYFPVRLHVEDEEAFDP---NRAYVFGYEPHSVLPIGVIALADLSGFLPLPK----IRALAS-SAVFYTPFLRH 148 (315)
T ss_pred HHHHHHHhcCeEEEEEchhhCCC---CCCEEEEECCCcchhhHHHhhhhhhhccCCCc----hHHHhh-hhhccCcHHHH
Confidence 45566668999999999999875 589999999999999987432 233 23 245555 333
Q ss_pred -cccCCeeEeecCCHHHHHHHHHHhhCCC-EEEecCCeec-----CCC--cccccchhhh----hcCCcEEEEEEeeccC
Q 010860 340 -LSPIPAIALTRDRAADAARISELLQKGD-LVVCPEGTTC-----REN--FLLRFSALFA----EMSDRIVPVAVNCKQN 406 (499)
Q Consensus 340 -~~~~~~i~i~R~~~~~~~~~~~~l~~G~-l~IFPEGTrt-----~~~--~l~~Fk~~~~----~~~~pVvPV~I~~~~~ 406 (499)
+.++|.++++|++ +.+.|++|. ++|||||||+ .+. .+++||.|++ ++|+||+||++.++..
T Consensus 149 ~~~~~G~ipv~R~~------~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~ 222 (315)
T PLN02783 149 IWTWLGLDPASRKN------FTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTR 222 (315)
T ss_pred HHHHcCCeEEcHHH------HHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchh
Confidence 3445999998853 457788995 9999999984 232 3568886654 4899999999998644
Q ss_pred CccccccCCcccc-------c----ccc---cccCCCC-eEEEEEccccCCcccccCCCCCHH---HHHHHHHHHHHHh
Q 010860 407 MFYGTTVRGVKFW-------D----PYF---FFMNPRP-TYEVTFLDRLPEEMTCKAGGKSAI---EVANYVQKVLGDV 467 (499)
Q Consensus 407 ~~~~~~~~~~~~~-------~----~~~---~~~~~~~-~v~v~~l~pi~~~~~~~~~~~~~~---~la~~v~~~i~~~ 467 (499)
.+.-- ..+.++. . .+| ....|++ ++++.+++||+.+.. ...+.+ ++.+++.++|++.
T Consensus 223 ~~~~~-~~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~~---~~~~~e~v~~~~~~~~~al~~L 297 (315)
T PLN02783 223 AYKWW-KPGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKKN---PQPSQEEVAEVLEQFVEALQDL 297 (315)
T ss_pred hhhhh-cCCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCCC---CCCCHHHHHHHHHHHHHHHHHH
Confidence 33110 0110000 0 011 1123443 899999999998642 222333 3444444445443
No 22
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=2.1e-18 Score=202.73 Aligned_cols=163 Identities=21% Similarity=0.245 Sum_probs=117.5
Q ss_pred hhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----c----ccCCeeEeecC
Q 010860 281 MLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----L----SPIPAIALTRD 351 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~----~~~~~i~i~R~ 351 (499)
.++++++++|.|++|. ++|+|+||||+|++|++++....++++ .+++| .++ + ...|+++|+|+
T Consensus 424 ~~~~~~~v~g~e~lp~---~~~~i~~~nH~s~~D~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~i~v~r~ 495 (1146)
T PRK08633 424 HTRYRLRVEGRENIPA---KGGALLLGNHVSWIDWALLQAASPRPI----RFVME-RSIYEKWYLKWFFKLFGVIPISSG 495 (1146)
T ss_pred HceEEEEEECCcCCCC---CCCEEEEECCCchHHHHHHHHHcCCCe----EEEee-HHhhhChhHHHHHHHCCEEEecCC
Confidence 3567889999999874 579999999999999999999997763 34444 332 2 23489999997
Q ss_pred CH-HHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhh----hcCCcEEEEEEeeccC-CccccccCCccccccccc
Q 010860 352 RA-ADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNCKQN-MFYGTTVRGVKFWDPYFF 424 (499)
Q Consensus 352 ~~-~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~~~~-~~~~~~~~~~~~~~~~~~ 424 (499)
+. +..+.+++.+++|. |+|||||||+.++++.+||++++ ++++|||||+|.+... .+.. .+..+.. .
T Consensus 496 ~~~~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~~~---~~~~~~~---~ 569 (1146)
T PRK08633 496 GSKESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIFSR---ASGKFLW---R 569 (1146)
T ss_pred ChHHHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEeccccccccc---ccccccc---c
Confidence 64 56788889999996 99999999999999999996653 4799999999987532 2210 0111111 1
Q ss_pred ccCC-CCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHH
Q 010860 425 FMNP-RPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVL 464 (499)
Q Consensus 425 ~~~~-~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i 464 (499)
.... ...++|+|++||+++ ...+++.+.+++..
T Consensus 570 ~~~~~~~~v~v~~~~pi~~~-------~~~~~~~~~~~~l~ 603 (1146)
T PRK08633 570 WPTRIPYPVTVAFGKPMPAH-------STAHEVKQAVFELS 603 (1146)
T ss_pred ccCCCCceEEEEECCCcCcc-------cCHHHHHHHHHHHH
Confidence 1112 237999999999874 34555555555444
No 23
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.78 E-value=1.9e-18 Score=159.67 Aligned_cols=169 Identities=20% Similarity=0.208 Sum_probs=114.2
Q ss_pred EEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHHHHh
Q 010860 22 SIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASRAVL 101 (499)
Q Consensus 22 ~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~~~~ 101 (499)
+++|||||||+..+|++.++...+ ........+. ..+ .....+...... .....+.|...+++. ++++
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~-~~~~~~~~~~-----~~~--~~g~i~~~~~~~-~~~~~~~~~~~~~~~---~~~~ 68 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLL-GTNDEVIELT-----RLA--PSGRISFEDALG-RRLALLHRSRSEEVA---KEFL 68 (177)
T ss_pred CEEecCccccccchhhHHHHHHHh-CChHHHHHHH-----HHH--HCCCCCHHHHHH-HHHHHhCCCCHHHHH---HHHH
Confidence 489999999999888777666542 1101111111 011 111111111122 223567777755443 4444
Q ss_pred hhHHHhhccH---HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHH
Q 010860 102 PRFYAADVRK---ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKK 177 (499)
Q Consensus 102 ~~~~~~~i~~---~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~ 177 (499)
.+.+. ++| +.++.++++| .++|+|+|.+.+++++++. +|+++++++++.+++ +|++||...+..++.+.+|.
T Consensus 69 ~~~~~--~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~-~g~~~g~~~~~~~~~~~~K~ 144 (177)
T TIGR01488 69 ARQVA--LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDD-NGLLTGPIEGQVNPEGECKG 144 (177)
T ss_pred HhcCC--cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECC-CCEEeCccCCcccCCcchHH
Confidence 44322 334 4455788999 9999999999999999999 999999999999854 78999987763345899999
Q ss_pred HHHHHHhCC----CCCeEEEeCCcCcHHHHhcc
Q 010860 178 LAVLKEFGE----DAPDLGIGDRQTDHDFMSIC 206 (499)
Q Consensus 178 ~~l~~~~~~----~~~~~aygDS~~D~pmL~~a 206 (499)
..++++... ...+++||||.+|++|++.|
T Consensus 145 ~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999887642 12468999999999999875
No 24
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.77 E-value=1.1e-19 Score=172.59 Aligned_cols=142 Identities=18% Similarity=0.136 Sum_probs=93.3
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccc-----ccccccc----CCeeEeecCCH--H----H-HHHHHHHh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK-----LSRFLSP----IPAIALTRDRA--A----D-AARISELL 363 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k-----~~~~~~~----~~~i~i~R~~~--~----~-~~~~~~~l 363 (499)
++|+|+||||+|++|++++.++++..... ..++++ .+ +++| +|+++|+|++. . . .+.+++.+
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~-~~~va~~e~~~~~-~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l 98 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLP-LPHIAAGENLNIP-ILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELL 98 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCC-CcEEEEchhhCcH-HHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHH
Confidence 37999999999999999999876311000 122222 12 3333 49999999642 1 1 23467788
Q ss_pred hCCC-EEEecCCeecCCCcccccchhhhh----c-------CCcEEEEEEeeccCCcccccc----CC-------ccccc
Q 010860 364 QKGD-LVVCPEGTTCRENFLLRFSALFAE----M-------SDRIVPVAVNCKQNMFYGTTV----RG-------VKFWD 420 (499)
Q Consensus 364 ~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~----~-------~~pVvPV~I~~~~~~~~~~~~----~~-------~~~~~ 420 (499)
++|. ++||||||||+++.+.+||.+++. + ++|||||+|+|.... .+... .| ..+..
T Consensus 99 ~~g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 177 (205)
T cd07993 99 KNGQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVL-EEELYAEELLGPPKPKESLSGLL 177 (205)
T ss_pred hCCceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCccc-chHHHHHHHcCCCCCCccHHHHH
Confidence 8995 999999999999999999955432 3 789999999997631 11110 01 01112
Q ss_pred cccc-ccCCCCeEEEEEccccCCcc
Q 010860 421 PYFF-FMNPRPTYEVTFLDRLPEEM 444 (499)
Q Consensus 421 ~~~~-~~~~~~~v~v~~l~pi~~~~ 444 (499)
+.|. +..+.++++|+|++||+.++
T Consensus 178 ~~~~~l~~~~g~v~v~~~~Pi~~~~ 202 (205)
T cd07993 178 GASKILRENFGRIRVDFGEPISLRE 202 (205)
T ss_pred HHHHHhhccCCeEEEECCCCcCHHH
Confidence 2222 33444599999999998754
No 25
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.77 E-value=1.6e-18 Score=165.53 Aligned_cols=172 Identities=20% Similarity=0.222 Sum_probs=111.9
Q ss_pred EEE-EEcCCCCCCCCCCCCCeEEEecCCCCC-hHHHHHHH-h----CCccceeeecccc-----cc---cccccCCeeEe
Q 010860 284 IHL-VIRGNPPPAPSSGSPGNLYVCNHRTPL-DPIVIAIA-L----GRKVSCVTYSVSK-----LS---RFLSPIPAIAL 348 (499)
Q Consensus 284 i~v-~v~G~~~~p~~~~~~p~iiVaNH~S~l-D~~~l~~~-~----~~~~~~v~~~v~k-----~~---~~~~~~~~i~i 348 (499)
+++ +|+|.|++|. ++|+|+|+||+|++ |++++.+. . ++++ .++++ .+ .++..+|++++
T Consensus 5 ~~~~~v~g~e~lp~---~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~----~~la~~~~~~~p~~~~~~~~~g~i~~ 77 (212)
T cd07987 5 FRVYEVRGLENIPD---EGPALLVHPHGGLPIDGALLAAAFLLLFPGRLP----RALADHFLFPLPGLRDLLRRLGAVPG 77 (212)
T ss_pred eeeEEEeccccCCC---CCcEEEEECCcchhHHHHHHHHHHHHhCCCCee----EEeecccceeCccHHHHHHHcCCccc
Confidence 356 9999999985 48999999999999 99999887 2 2232 23333 11 12334588887
Q ss_pred ecCCHHHHHHHHHHhhCCC-EEEecCCeecCC-------Ccccccchhhh----hcCCcEEEEEEeeccCCcccccc-CC
Q 010860 349 TRDRAADAARISELLQKGD-LVVCPEGTTCRE-------NFLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTV-RG 415 (499)
Q Consensus 349 ~R~~~~~~~~~~~~l~~G~-l~IFPEGTrt~~-------~~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~-~~ 415 (499)
+|+ .+.+.|++|. ++|||||||+.. ..+++||.+++ ++++||+||++.++...+..... .+
T Consensus 78 ~r~------~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~ 151 (212)
T cd07987 78 SRE------NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDG 151 (212)
T ss_pred CHH------HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCC
Confidence 653 4667888996 999999999632 23789996553 48999999999987654321100 00
Q ss_pred cccccccccccCCCC-eEEEEEccccCCccc--ccCCCCCHHHHHHHHHHHHHHhh
Q 010860 416 VKFWDPYFFFMNPRP-TYEVTFLDRLPEEMT--CKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 416 ~~~~~~~~~~~~~~~-~v~v~~l~pi~~~~~--~~~~~~~~~~la~~v~~~i~~~l 468 (499)
.......|.+..|+. .+++.|++||..... ...+.++.+++.++++++|.+.+
T Consensus 152 ~~~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 152 PVGKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred CceeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 001111122233443 799999999987531 00123456678888888777765
No 26
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.75 E-value=3.4e-17 Score=152.66 Aligned_cols=162 Identities=27% Similarity=0.356 Sum_probs=120.1
Q ss_pred hhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhC----Cccceeeecccc-cccccccCCeeEeecCC---
Q 010860 281 MLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALG----RKVSCVTYSVSK-LSRFLSPIPAIALTRDR--- 352 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~----~~~~~v~~~v~k-~~~~~~~~~~i~i~R~~--- 352 (499)
+.+++++++|.+++|. ++|+|+++||+|++|.+++...+. +++..+...... ...++.++|.++++|++
T Consensus 9 ~~~~~~~~~g~~~~p~---~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~i~r~~~~~ 85 (187)
T cd06551 9 FGFVRLEVKGPPPPPG---GGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFTRLGAFSVDRDSPRS 85 (187)
T ss_pred cceEEEEEeccccCCC---CCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHhhcCeEEecCCChhh
Confidence 3688999999999975 579999999999999999998863 342222221111 12445666899999854
Q ss_pred -HHHHHHHHHHhhC-CC-EEEecCCeecCCC-cccccchhhh----hcCCcEEEEEEeeccCCccccccCCccccccccc
Q 010860 353 -AADAARISELLQK-GD-LVVCPEGTTCREN-FLLRFSALFA----EMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFF 424 (499)
Q Consensus 353 -~~~~~~~~~~l~~-G~-l~IFPEGTrt~~~-~l~~Fk~~~~----~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~ 424 (499)
.+..+.+.+.+++ |. ++||||||++++. .+.+|+.+++ ..++||+||++.+....+
T Consensus 86 ~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~---------------- 149 (187)
T cd06551 86 AAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF---------------- 149 (187)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc----------------
Confidence 3456788889999 75 9999999999876 7889996543 368999999998874211
Q ss_pred ccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 425 FMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 425 ~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
.+..++++++++||..+. ..+.+++++++.+.|.+.+
T Consensus 150 --~~~~~~~i~~~~pi~~~~-----~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 --EQFPEIFVRIGPPIPYAE-----TALGEELAAELANRLTRLL 186 (187)
T ss_pred --CCCCcEEEEECCCccccc-----cccHHHHHHHHHHHHHHhc
Confidence 122379999999999873 3557788888888777654
No 27
>PRK14014 putative acyltransferase; Provisional
Probab=99.74 E-value=1.1e-16 Score=159.94 Aligned_cols=121 Identities=18% Similarity=0.191 Sum_probs=85.5
Q ss_pred HhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----ccc----CCeeEeec
Q 010860 280 EMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LSP----IPAIALTR 350 (499)
Q Consensus 280 ~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~~----~~~i~i~R 350 (499)
.++|++++|+|.|++++ ++++|+||||+|++|++++.+++++.+. ...+++| .++ +++ ++.++++|
T Consensus 69 ~~~g~k~~V~G~e~l~~---~~~~IiisNHqS~~D~l~l~~~~~~~~~-~~kfv~K-~eL~~iP~~G~~~~~~~~ifi~R 143 (301)
T PRK14014 69 LLPRTQWDVEGLEGLSK---KGWYLVISNHQSWVDILVLQYVFNRRIP-MLKFFLK-QELIWVPFLGLAWWALDFPFMKR 143 (301)
T ss_pred HhCCcEEEEEcCCCCCC---CCCEEEEECCCcHHHHHHHHHHHhhccC-ceEEEeh-HHhhhcccHHHHHHHcCCeEEec
Confidence 37899999999999874 5799999999999999999998865422 1345666 443 333 28999999
Q ss_pred CCHH-----------HHHHHHHH---hhC-CC-EEEecCCeecCC----------Ccccccch-hhh-h--c----CCcE
Q 010860 351 DRAA-----------DAARISEL---LQK-GD-LVVCPEGTTCRE----------NFLLRFSA-LFA-E--M----SDRI 396 (499)
Q Consensus 351 ~~~~-----------~~~~~~~~---l~~-G~-l~IFPEGTrt~~----------~~l~~Fk~-~~~-~--~----~~pV 396 (499)
++++ +.+++++. +++ |. ++|||||||+.. +.+++||+ ++. + + -.+|
T Consensus 144 ~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~I 223 (301)
T PRK14014 144 YSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDGL 223 (301)
T ss_pred cchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCEE
Confidence 6421 23333332 333 54 999999999632 36889994 332 1 2 2689
Q ss_pred EEEEEeecc
Q 010860 397 VPVAVNCKQ 405 (499)
Q Consensus 397 vPV~I~~~~ 405 (499)
+||+|.|+.
T Consensus 224 ~dvti~y~~ 232 (301)
T PRK14014 224 LDVTIVYPD 232 (301)
T ss_pred EEEEEEeCC
Confidence 999999875
No 28
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.73 E-value=5.8e-17 Score=163.30 Aligned_cols=185 Identities=11% Similarity=0.105 Sum_probs=130.1
Q ss_pred CCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 010860 18 SAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELAS 97 (499)
Q Consensus 18 ~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~ 97 (499)
...++++|||||||+..++ +..+... .+.+...... .-..+....+....+++. ...+.|.+++.++.+.
T Consensus 108 ~~~~LvvfDmDGTLI~~e~-i~eia~~-~g~~~~v~~i-------t~~~m~Geldf~esl~~r-v~~l~g~~~~il~~v~ 177 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIEC-IDEIAKL-AGTGEEVAEV-------TERAMRGELDFEASLRQR-VATLKGADANILQQVR 177 (322)
T ss_pred cCCCEEEEECCCCCcchHH-HHHHHHH-hCCchHHHHH-------HHHHHcCCcCHHHHHHHH-HHHhCCCCHHHHHHHH
Confidence 4678999999999997644 3434332 1111111110 001111122222223322 2457888776665544
Q ss_pred HHHhhhHHHhhccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccc
Q 010860 98 RAVLPRFYAADVRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVG 173 (499)
Q Consensus 98 ~~~~~~~~~~~i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g 173 (499)
+.. .++|.+ ++.++++| +++|+|+++..+++++.++ +|+++++++.+++. +|++||.+.+. ++.+
T Consensus 178 ~~l-------~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~--dg~ltg~v~g~-iv~~ 246 (322)
T PRK11133 178 ENL-------PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIM--DGKLTGNVLGD-IVDA 246 (322)
T ss_pred HhC-------CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEE--CCEEEeEecCc-cCCc
Confidence 321 144544 55789999 9999999999999999999 99999999999998 99999999984 4578
Q ss_pred hhHHHHHHHHhC---C-CCCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCc
Q 010860 174 KWKKLAVLKEFG---E-DAPDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPR 223 (499)
Q Consensus 174 ~~K~~~l~~~~~---~-~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~ 223 (499)
+.|.+.+++++. . ...++++|||.||++|++.||.++++|++++.+..+.
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad 300 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQ 300 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 899988887653 2 2358999999999999999999999999988775554
No 29
>PRK08238 hypothetical protein; Validated
Probab=99.72 E-value=2e-17 Score=174.72 Aligned_cols=171 Identities=19% Similarity=0.198 Sum_probs=122.2
Q ss_pred CeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010860 20 YGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASRA 99 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~~ 99 (499)
...-+||+||||+++|+.++++.... + +.+++.+. .|...... .. ..++.+.. ..+++.+.+.
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l-~-~~p~~~~~----l~~~~~~g----~a-~lK~~~a~-~~~~d~~~lp----- 72 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALL-R-RNPLALLR----LPLWLLRG----KA-ALKRRLAR-RVDLDVATLP----- 72 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHH-H-hChHHHHH----HHHHHHhc----HH-HHHHHHHh-hcCCChhhCC-----
Confidence 34789999999999999888887764 2 34443221 12222111 12 23322222 2244333321
Q ss_pred HhhhHHHhhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC-cEEEeCeEEEecCCCceeeeEecCCcccch
Q 010860 100 VLPRFYAADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGG-DKVLGTEIEVNPRTKRATGFVKRPGVLVGK 174 (499)
Q Consensus 100 ~~~~~~~~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~-d~vigt~l~~~~~~g~~tG~~~~~~~~~g~ 174 (499)
++|++. ++|+++| +++|+|||++.++++++++ +|+ |.++|++... + |.|+
T Consensus 73 ---------~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGlFd~Vigsd~~~--------------~-~kg~ 127 (479)
T PRK08238 73 ---------YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGLFDGVFASDGTT--------------N-LKGA 127 (479)
T ss_pred ---------CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCEEEeCCCcc--------------c-cCCc
Confidence 334444 4789999 9999999999999999999 995 9999987321 3 4889
Q ss_pred hHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCcccCCceeEEc
Q 010860 175 WKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPRDRLKSRIIFH 233 (499)
Q Consensus 175 ~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~~~~~~~~~f~ 233 (499)
+|+.+++++++++ ....+|||.+|+|+++.|++|++|||+++.+..+++.+|....|.
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~ 185 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFP 185 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecC
Confidence 9999999998853 355679999999999999999999999998888887777665554
No 30
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.71 E-value=6.7e-17 Score=151.07 Aligned_cols=115 Identities=22% Similarity=0.315 Sum_probs=85.6
Q ss_pred HHhcCCCHHHHHHHHHHHhhhH-HHhhccH---HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE--EEeCeEEEe
Q 010860 83 ISFSGLKIRDIELASRAVLPRF-YAADVRK---ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK--VLGTEIEVN 155 (499)
Q Consensus 83 ~~l~G~~~~~l~~~~~~~~~~~-~~~~i~~---~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~--vigt~l~~~ 155 (499)
..+.+++.++++.+.+. +.++ +.+.+.+ +.+++|+++| +++|||||++.+++++++. +|++. ++||++ ..
T Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~v~~~~~-~~ 140 (192)
T PF12710_consen 64 ERLRGLSERYLEEIAKD-IEQYKLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDNVIGNEL-FD 140 (192)
T ss_dssp HHHHTHHHHHHHHHHHH-HHHHHHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGGEEEEEE-EC
T ss_pred HHHHHHHHHHHHHHHHh-hcccccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEEEEEee-ee
Confidence 56777778888877776 4322 0111112 3444688999 9999999999999999998 99987 999999 54
Q ss_pred cCC-CceeeeEecCCcccchhHHHHHHHH---h--C-CCCCeEEEeCCcCcHHHHh
Q 010860 156 PRT-KRATGFVKRPGVLVGKWKKLAVLKE---F--G-EDAPDLGIGDRQTDHDFMS 204 (499)
Q Consensus 156 ~~~-g~~tG~~~~~~~~~g~~K~~~l~~~---~--~-~~~~~~aygDS~~D~pmL~ 204 (499)
+ + +..+|++.+. + .| +|+++++++ . + .....++||||.+|+|||+
T Consensus 141 ~-~~~~~~~~~~~~-~-~~-~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 141 N-GGGIFTGRITGS-N-CG-GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp T-TCCEEEEEEEEE-E-ES-HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred c-ccceeeeeECCC-C-CC-cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 1 3 4678888873 3 45 899999998 1 1 2235789999999999985
No 31
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.70 E-value=1.7e-16 Score=150.22 Aligned_cols=165 Identities=14% Similarity=0.155 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc------------cc----cCCeeEeecCC---
Q 010860 292 PPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF------------LS----PIPAIALTRDR--- 352 (499)
Q Consensus 292 ~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~------------~~----~~~~i~i~R~~--- 352 (499)
|++|. ++++|++|||+|++|++++..++++++ .+++| .++ ++ ..+.++|.|+.
T Consensus 16 e~ip~---~~~vIl~sNH~S~~Dp~ii~~~~~r~~----~~lAk-~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~ 87 (235)
T cd07985 16 EQLAQ---GHNVVLLANHQTEADPAVISLLLEKTH----PYLAE-NMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHID 87 (235)
T ss_pred HhccC---CCCEEEEECCcccccHHHHHHHhcccc----HHHhh-hhheeccccccccHhHHHHHhhCCceeeecCcccc
Confidence 56664 479999999999999999999997663 34444 221 12 23788888854
Q ss_pred -------------HHHHHHHHHHhhCC-C-EEEecCCeecC---CCcccc--cc--------hhhhhcCCc--EEEEEEe
Q 010860 353 -------------AADAARISELLQKG-D-LVVCPEGTTCR---ENFLLR--FS--------ALFAEMSDR--IVPVAVN 402 (499)
Q Consensus 353 -------------~~~~~~~~~~l~~G-~-l~IFPEGTrt~---~~~l~~--Fk--------~~~~~~~~p--VvPV~I~ 402 (499)
.++++.+.+.|++| . ++|||||||++ ++.+.| |. .++..+++| |+|++|.
T Consensus 88 ~~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~ 167 (235)
T cd07985 88 DPPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALL 167 (235)
T ss_pred cchhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEE
Confidence 23455667788998 4 78999999995 344444 65 234458999 9999999
Q ss_pred eccCCccc-cccCCcccccccccccCCCCeEEEEEccccCCcccc---cCCCCCHHHHHHHHHHHHHHhhC
Q 010860 403 CKQNMFYG-TTVRGVKFWDPYFFFMNPRPTYEVTFLDRLPEEMTC---KAGGKSAIEVANYVQKVLGDVLG 469 (499)
Q Consensus 403 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~---~~~~~~~~~la~~v~~~i~~~l~ 469 (499)
+. .++.+ ..+ .....+. ..+. +..+.|.+++||..++.+ .+..+.++++++.+.+.+.+.+.
T Consensus 168 ~y-di~Ppp~~v-~~~ige~--r~~~-f~~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 168 TY-DIMPPPKQV-EKEIGEK--RAVA-FTGVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred ee-cccCCCccc-ccccccc--cccc-ccceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 44 33321 110 0001111 1112 236899999999987542 11235677899999999888764
No 32
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.70 E-value=5.4e-17 Score=177.68 Aligned_cols=192 Identities=17% Similarity=0.092 Sum_probs=116.8
Q ss_pred HHHHHHhh--cEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc----ccc----CC
Q 010860 275 VRYTYEML--GIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF----LSP----IP 344 (499)
Q Consensus 275 ~~~~~~~~--Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~----~~~----~~ 344 (499)
.+.+.+++ ++.+.+.+.+.+..-..+.|+|+|+||+|++|++++..++.+.-....+++++ .++ +++ .|
T Consensus 239 ~r~~~r~y~~~v~v~~~~~~~lr~~~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag-~~L~~~~lG~llr~~G 317 (783)
T PRK03355 239 GRLFSRGFDPEIDYDEYELAALRALLEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGG-INLSFGPMGPIMRRSG 317 (783)
T ss_pred HHHHHHhccccceeCHHHHHHHHhccCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeH-HHhccHHHHHHHHHcC
Confidence 34444444 66777776554321113579999999999999999999885310011234444 222 233 49
Q ss_pred eeEeecCC--HHH----HHH-HHHHhhCC-CEEEecCCeecCCCcccccchhhh-----------hcCCcEEEEEEeecc
Q 010860 345 AIALTRDR--AAD----AAR-ISELLQKG-DLVVCPEGTTCRENFLLRFSALFA-----------EMSDRIVPVAVNCKQ 405 (499)
Q Consensus 345 ~i~i~R~~--~~~----~~~-~~~~l~~G-~l~IFPEGTrt~~~~l~~Fk~~~~-----------~~~~pVvPV~I~~~~ 405 (499)
++||+|+. ... ++. +...+++| ++.+|||||||+++.+++||.|.. ..++|||||+|.|..
T Consensus 318 a~fIrR~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~ 397 (783)
T PRK03355 318 MIFIRRNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQ 397 (783)
T ss_pred cEEecCCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecc
Confidence 99999954 222 222 23345678 599999999999999999995431 257899999999875
Q ss_pred CCcccc---ccCC-ccccccccccc--------CCCCeEEEEEccccCCcccccCCC--------C---CHHHHHHHHHH
Q 010860 406 NMFYGT---TVRG-VKFWDPYFFFM--------NPRPTYEVTFLDRLPEEMTCKAGG--------K---SAIEVANYVQK 462 (499)
Q Consensus 406 ~~~~~~---~~~~-~~~~~~~~~~~--------~~~~~v~v~~l~pi~~~~~~~~~~--------~---~~~~la~~v~~ 462 (499)
.+=.++ ...| .+.-+.++.++ ...+++.|+|++||+.+++.+... . ..++++.+|..
T Consensus 398 v~E~~~y~~e~~G~~k~~esl~~~~~~~~~l~~~~~G~i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~ 477 (783)
T PRK03355 398 LHEIGEYAAEARGGEKTPEGLRWLYNYIKAQGERNYGKIYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAW 477 (783)
T ss_pred cccchhHHHHhcCCCcccccHHHHHHHHHHhccCCceeEEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHH
Confidence 321111 0112 12222222221 223589999999999987643111 0 23456777777
Q ss_pred HHHHh
Q 010860 463 VLGDV 467 (499)
Q Consensus 463 ~i~~~ 467 (499)
.|.+.
T Consensus 478 ~In~~ 482 (783)
T PRK03355 478 RINQV 482 (783)
T ss_pred HHHhc
Confidence 66654
No 33
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.69 E-value=1.1e-16 Score=140.04 Aligned_cols=116 Identities=24% Similarity=0.355 Sum_probs=88.1
Q ss_pred cEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeee-ccccccccc----ccCCeeEeecCCHH---
Q 010860 283 GIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTY-SVSKLSRFL----SPIPAIALTRDRAA--- 354 (499)
Q Consensus 283 Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~-~v~k~~~~~----~~~~~i~i~R~~~~--- 354 (499)
|++++++|.+++|+ ++|+|+++||.|++|.+++...+++++..+.. .+.+ ..++ ..+|+++|+|++.+
T Consensus 1 ~~~~~v~g~~~lp~---~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~g~~~i~r~~~~~~~ 76 (130)
T TIGR00530 1 GLKVEVVGPENLPA---KSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKW-IPFFGIMLWLTGAIFIDRENIRAIA 76 (130)
T ss_pred CcEEEEECcccCCC---CCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhh-CCHHHHHHHHcCCEEecCCChHHHH
Confidence 68899999999974 58999999999999999998888655322222 2222 1222 33489999986532
Q ss_pred -HHHHHHHHhhCCC-EEEecCCeecCCCcccccchhh----hhcCCcEEEEEEe
Q 010860 355 -DAARISELLQKGD-LVVCPEGTTCRENFLLRFSALF----AEMSDRIVPVAVN 402 (499)
Q Consensus 355 -~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~----~~~~~pVvPV~I~ 402 (499)
..+.+.+.+++|. ++|||||++++++.+.+|+.++ .++++||+||.++
T Consensus 77 ~~~~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~~ 130 (130)
T TIGR00530 77 TALKAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVLS 130 (130)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEeC
Confidence 3557788899996 9999999999888899999544 3479999999874
No 34
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.69 E-value=2.1e-16 Score=148.10 Aligned_cols=169 Identities=12% Similarity=0.116 Sum_probs=108.0
Q ss_pred hhcEEEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeeccccccccc----ccCCeeEeecCC---
Q 010860 281 MLGIHLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRFL----SPIPAIALTRDR--- 352 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~~----~~~~~i~i~R~~--- 352 (499)
.++++++++|.|+++.. ..++|+|+++||+|.+|++++... +.++..+.+-... ..++ ...|.++|+|++
T Consensus 5 ~~~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~l~~~~~~~~-~~~~~~v~~~~~~-~~~~~~~~~~~g~~~i~r~~~~~ 82 (189)
T cd07983 5 YLTLRWRVIGDESADALIAQGEPVILAFWHGRLLLMPYLFRR-RKRIAALISRSKD-GEIIARVLERLGIRVVRGSSSRG 82 (189)
T ss_pred eEeEeEEEeCchhhhhhccCCCCEEEEEeCchHHHhHHHhcc-CCCeEEEEecCcC-HHHHHHHHHHhCCCEEEcCCCCc
Confidence 46789999999998621 125799999999999999988765 4453222211111 1222 234889998743
Q ss_pred -HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhh----hhcCCcEEEEEEeeccCCccccccCCccccccccccc
Q 010860 353 -AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALF----AEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFM 426 (499)
Q Consensus 353 -~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~----~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (499)
.+.++.+.+.+++|. ++||||||++. ..+|+.++ ..+++||+||++.++..+. ..++ ... .+.
T Consensus 83 ~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~----~~~~--~~~--~~p 151 (189)
T cd07983 83 GAAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWR----LKSW--DRF--IIP 151 (189)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEe----ccCc--ccc--ccC
Confidence 345677888898996 99999999864 34788543 3489999999998774311 1111 000 011
Q ss_pred CCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 427 NPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 427 ~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
.+..+++|+|++||+++. ..+ ++..+++.+.+.+.+
T Consensus 152 ~~~~~~~v~~~~pi~~~~-----~~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 152 KPFSRVVIVFGEPIHVPP-----DAD-EEELEEYRLELEAAL 187 (189)
T ss_pred CCCcceEEEEeCCEeeCC-----CCC-HHHHHHHHHHHHHHh
Confidence 233479999999998753 233 444555555555443
No 35
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.66 E-value=1.8e-15 Score=142.45 Aligned_cols=185 Identities=16% Similarity=0.110 Sum_probs=113.9
Q ss_pred CCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCC----CHHHHH
Q 010860 19 AYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGL----KIRDIE 94 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~----~~~~l~ 94 (499)
+.++++|||||||+++++.+..+... ++........ .........+...... .....+.+. ..++++
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 73 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRR-LETCGLAKKN-------AELFFSGRISYEEWAR-LDASLWKRRSGRLRREEVE 73 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHH-hCchHHHHHH-------HHHHHcCCCCHHHHHH-HHHHHHhhcccCCCHHHHH
Confidence 45789999999999987765544332 2111000100 0011111122221111 111233332 444444
Q ss_pred HHHHHHhhhHHHhhccHH---HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCc
Q 010860 95 LASRAVLPRFYAADVRKE---SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGV 170 (499)
Q Consensus 95 ~~~~~~~~~~~~~~i~~~---~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~ 170 (499)
+..+ +. .++|. .++.++++| +++|||++.+.+++++++. +|++.++++.+...+ +|++++.... .
T Consensus 74 ~~~~----~~---~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~-~g~~~p~~~~--~ 142 (201)
T TIGR01491 74 EIFK----EI---SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDE-KGFIQPDGIV--R 142 (201)
T ss_pred HHHH----hC---CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcC-CCeEecceee--E
Confidence 3322 21 24544 455789999 9999999999999999999 999999999887753 6777654211 0
Q ss_pred ccchhH---HHHHHHHhCC-CCCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCc
Q 010860 171 LVGKWK---KLAVLKEFGE-DAPDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPR 223 (499)
Q Consensus 171 ~~g~~K---~~~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~ 223 (499)
+....| ++++.+.++. ...+++||||.+|+++++.|+.++++||+..++.+++
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 143 VTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred EccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 011234 3444444553 2347899999999999999999999999998876654
No 36
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.66 E-value=1.1e-17 Score=146.85 Aligned_cols=115 Identities=30% Similarity=0.406 Sum_probs=53.2
Q ss_pred EEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccc-----cc---cccccCCeeEeecCC----
Q 010860 285 HLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK-----LS---RFLSPIPAIALTRDR---- 352 (499)
Q Consensus 285 ~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k-----~~---~~~~~~~~i~i~R~~---- 352 (499)
+++|+|.|++|+ ++|+|+++||+|++|.+++..++.+.......++.+ .+ .++..+|+++++|+.
T Consensus 1 ~v~v~g~e~l~~---~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~~~ 77 (132)
T PF01553_consen 1 KVEVEGLENLPK---GGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRKKN 77 (132)
T ss_dssp -----HHHHHHT---T-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHHHH
T ss_pred CCccCccccCCC---CCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeeccccc
Confidence 478999999875 589999999999999999999983221111233333 11 112344899999932
Q ss_pred HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhhh----cCCcEEEEEEe
Q 010860 353 AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFAE----MSDRIVPVAVN 402 (499)
Q Consensus 353 ~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~----~~~pVvPV~I~ 402 (499)
....+.+++.+++|. ++||||||++++..+++|+.+++. ++++|+||+|+
T Consensus 78 ~~~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 78 RKALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred chhHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 234567788889986 999999999999888999965543 69999999985
No 37
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.65 E-value=2e-15 Score=144.56 Aligned_cols=183 Identities=16% Similarity=0.191 Sum_probs=121.3
Q ss_pred CCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHH
Q 010860 19 AYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASR 98 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~ 98 (499)
+.++++|||||||+++++. ..+... . +.. ..... ..... ..+..+.....++. ...+.+.+.+.++++.+
T Consensus 13 ~~k~iiFD~DGTL~~~~~~-~~l~~~-~--g~~-~~~~~--~~~~~--~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAETI-DEIAKI-A--GVE-EEVSE--ITERA--MRGELDFKASLRER-VALLKGLPVELLKEVRE 82 (219)
T ss_pred cCCEEEEeCcccCCCchHH-HHHHHH-h--CCH-HHHHH--HHHHH--HcCCCCHHHHHHHH-HHHhCCCCHHHHHHHHh
Confidence 4579999999999997653 333222 1 111 10000 00000 11112222212222 23457777766554443
Q ss_pred HHhhhHHHhhccH---HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccch
Q 010860 99 AVLPRFYAADVRK---ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGK 174 (499)
Q Consensus 99 ~~~~~~~~~~i~~---~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~ 174 (499)
.. .++| +.++.++++| +++|+|++...+++++++. +|+++++++.+.++ +|.++|.+.++.+ .+.
T Consensus 83 ~~-------~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~--~~~~~~~~~~~~~-~~~ 151 (219)
T TIGR00338 83 NL-------PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVE--DGKLTGLVEGPIV-DAS 151 (219)
T ss_pred cC-------CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEE--CCEEEEEecCccc-CCc
Confidence 21 1333 4556788999 9999999999999999999 99999999999998 8999999887543 555
Q ss_pred hHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCC
Q 010860 175 WKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLP 222 (499)
Q Consensus 175 ~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~ 222 (499)
.|...++..+ +.. ..++++|||.+|+++++.|+.++++|++++++..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a 203 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKA 203 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhc
Confidence 6777666544 321 24789999999999999999999999987665433
No 38
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.61 E-value=2.9e-15 Score=165.61 Aligned_cols=160 Identities=14% Similarity=0.052 Sum_probs=100.3
Q ss_pred EEEEcCCCCCCCCC-CCCCeEEEecCCCCChHHHHHHHhCCccceeeecccc----cc---cccccCCeeEeecCCHH--
Q 010860 285 HLVIRGNPPPAPSS-GSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK----LS---RFLSPIPAIALTRDRAA-- 354 (499)
Q Consensus 285 ~v~v~G~~~~p~~~-~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k----~~---~~~~~~~~i~i~R~~~~-- 354 (499)
.++|.|.|+++... ++.|+|+|+||+|++|++++..++.+.........++ .+ .++...|+++|+|+.+.
T Consensus 275 ~v~V~g~E~l~~~~~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~~p~~g~llr~~GaffIrR~~~~~~ 354 (799)
T TIGR03703 275 GINVNNADRVRKLAQKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGNK 354 (799)
T ss_pred ceEEechhhcccccCCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhccHHHHHHHHHCCceEeecCCCcch
Confidence 46778989886311 2459999999999999999998875431111111122 11 11233499999995421
Q ss_pred ----HH-HHHHHHhhCCC-EEEecCCeecCCCcccccchhhhh-----------cCCcEEEEEEeeccCCccc-------
Q 010860 355 ----DA-ARISELLQKGD-LVVCPEGTTCRENFLLRFSALFAE-----------MSDRIVPVAVNCKQNMFYG------- 410 (499)
Q Consensus 355 ----~~-~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~-----------~~~pVvPV~I~~~~~~~~~------- 410 (499)
.. +.+.+.+++|. +.||||||||+++.+++||.|... .+++||||+|.|..- +..
T Consensus 355 ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv-~E~~~y~~El 433 (799)
T TIGR03703 355 LYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHV-MEVATYLKEL 433 (799)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccc-cchhHHHHHh
Confidence 11 23456788894 999999999999999999954321 268999999988632 111
Q ss_pred --cccCCcccccccc--cccCCCCeEEEEEccccCCccc
Q 010860 411 --TTVRGVKFWDPYF--FFMNPRPTYEVTFLDRLPEEMT 445 (499)
Q Consensus 411 --~~~~~~~~~~~~~--~~~~~~~~v~v~~l~pi~~~~~ 445 (499)
.+.....+...+. ..+...+++.|.|++||+.+++
T Consensus 434 ~G~~K~kEsl~~~l~~~~~l~~~G~i~V~FGePIsl~~~ 472 (799)
T TIGR03703 434 RGKRKEKESVFGVLKTLRKLRNFGQGYVNFGEPINLNDY 472 (799)
T ss_pred cCCCccccCHHHHHHHHhccCCCceEEEEeCCCccHHHH
Confidence 1110011111110 1112346999999999987654
No 39
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.58 E-value=9.4e-15 Score=161.67 Aligned_cols=159 Identities=18% Similarity=0.169 Sum_probs=99.9
Q ss_pred EEEEcCCCCCCCCC-CCCCeEEEecCCCCChHHHHHHHhCCccceeeecccc----ccccccc----CCeeEeecCCH-H
Q 010860 285 HLVIRGNPPPAPSS-GSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK----LSRFLSP----IPAIALTRDRA-A 354 (499)
Q Consensus 285 ~v~v~G~~~~p~~~-~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k----~~~~~~~----~~~i~i~R~~~-~ 354 (499)
.++|.|.|+++.-. ++.|+|+|+||+|++|++++..++.+. .....++++ ...++++ .|+++|+|+.. .
T Consensus 285 ~i~V~g~e~L~~~~~~~~~vI~v~NHrS~lD~llL~~~l~~~-gl~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~ 363 (818)
T PRK04974 285 GINVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQ-GLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 363 (818)
T ss_pred ceEEcchhhhhhcccCCCCEEEEeCCCCchHHHHHHHHHhhc-CCCCceEEehHHhcchHHHHHHHHCCceEeeCCCCch
Confidence 47788999986311 245899999999999999999887433 111122222 0112233 39999999642 2
Q ss_pred HH------HHHHHHhhCCC-EEEecCCeecCCCcccccchhhhh-----------cCCcEEEEEEeeccCCccccc----
Q 010860 355 DA------ARISELLQKGD-LVVCPEGTTCRENFLLRFSALFAE-----------MSDRIVPVAVNCKQNMFYGTT---- 412 (499)
Q Consensus 355 ~~------~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~-----------~~~pVvPV~I~~~~~~~~~~~---- 412 (499)
.+ +.+++.+++|. +.||||||||+++.+++||.|... ..++||||+|.|..- +....
T Consensus 364 ~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv-~E~~~y~~e 442 (818)
T PRK04974 364 KLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHV-MEVGTYAKE 442 (818)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccch-hhhHHHHHH
Confidence 11 13456778895 999999999999999999954321 146999999988531 11100
Q ss_pred cCCc-ccccccccc------cCCCCeEEEEEccccCCccc
Q 010860 413 VRGV-KFWDPYFFF------MNPRPTYEVTFLDRLPEEMT 445 (499)
Q Consensus 413 ~~~~-~~~~~~~~~------~~~~~~v~v~~l~pi~~~~~ 445 (499)
..|. +..+.+|.+ ....+++.|.|++||+.+++
T Consensus 443 l~G~~K~kEsl~~il~~i~~~~~~G~v~V~FGePisl~~~ 482 (818)
T PRK04974 443 LRGAPKEKESLFQVLRGIRKLRNFGQGYVNFGEPIPLNDY 482 (818)
T ss_pred hcCCCCcCcCHHHHHHHHhhcCCCceEEEEeCCCccHHHH
Confidence 0111 111222211 22346999999999986553
No 40
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.56 E-value=4.7e-14 Score=134.83 Aligned_cols=170 Identities=18% Similarity=0.138 Sum_probs=109.1
Q ss_pred EEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHHHHhh
Q 010860 23 IAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASRAVLP 102 (499)
Q Consensus 23 avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~~~~~ 102 (499)
++|||||||+..|+...++..++ ...+.... . .+.+.....++.+...+.++...+.++ ..+++.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~---~~~~~~~~-----~------~~~~g~~~~~e~~~~~~~~~~~~~~~~-~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFA---PPEWEALK-----D------GVLSKTLSIQEGVGRMFGLLPSSLKEE-ITSFVL 66 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhC---cHHHHHHH-----H------HHHcCCccHHHHHHHHHhhCCCchHHH-HHHHHH
Confidence 69999999999887554443321 11111110 0 011111112223344556665544332 233332
Q ss_pred hHHHhhccH---HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhc-CCcEEEeCeEEEecCCCceeeeEecC------Ccc
Q 010860 103 RFYAADVRK---ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFL-GGDKVLGTEIEVNPRTKRATGFVKRP------GVL 171 (499)
Q Consensus 103 ~~~~~~i~~---~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~l-g~d~vigt~l~~~~~~g~~tG~~~~~------~~~ 171 (499)
+. ..++| +.+++++++| .++|||+|++.+++++++. + +.+.+.|+++.+. ++.+++....+ +.|
T Consensus 67 ~~--~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~--~~~~~~~~p~~~~~~~~~~c 141 (214)
T TIGR03333 67 ET--AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFS--NEYIHIDWPHPCDGTCQNQC 141 (214)
T ss_pred hc--CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEee--CCeeEEeCCCCCccccccCC
Confidence 22 23555 4555788999 9999999999999999998 5 4578899999887 66667654321 123
Q ss_pred cchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 172 VGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 172 ~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
|..|...++++......++++|||.+|+++++.|+..++-+
T Consensus 142 -g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 -GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred -CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 67899999987654445789999999999999999866644
No 41
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.54 E-value=3.6e-14 Score=131.95 Aligned_cols=147 Identities=29% Similarity=0.401 Sum_probs=105.7
Q ss_pred hcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecc-cccccc----cccCCeeEeecCC----
Q 010860 282 LGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSV-SKLSRF----LSPIPAIALTRDR---- 352 (499)
Q Consensus 282 ~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v-~k~~~~----~~~~~~i~i~R~~---- 352 (499)
++.+++++|.+++++ ++++|+++||.|++|.+++......+..++.... .+ ..+ +.+.|++++++..
T Consensus 8 ~~~~v~v~~~~~~~~---~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~ 83 (184)
T cd07989 8 LGVRVRVEGLENLPP---KGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFK-IPFLGWLLRLLGAIPIDRGNGRSA 83 (184)
T ss_pred eceEEEEEccccCCC---CCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhh-CchHHHHHHHCCeEEEecCCchhH
Confidence 578999999998763 5799999999999999888877533322222211 12 122 2344899998854
Q ss_pred HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhh----hhcCCcEEEEEEeeccCCccccccCCcccccccccccC
Q 010860 353 AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALF----AEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMN 427 (499)
Q Consensus 353 ~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~----~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (499)
.+.++.+.+.+++|. ++|||||++++++...+|+.+. ..+++||+||.+.+....+. .. ....
T Consensus 84 ~~~~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~----~~--------~~~~ 151 (184)
T cd07989 84 REALREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLP----KG--------KKLP 151 (184)
T ss_pred HHHHHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCc----CC--------CCcC
Confidence 456678888899986 9999999999888899999543 33799999999998753221 00 1223
Q ss_pred CCCeEEEEEccccCCcc
Q 010860 428 PRPTYEVTFLDRLPEEM 444 (499)
Q Consensus 428 ~~~~v~v~~l~pi~~~~ 444 (499)
+...++|++++||.++.
T Consensus 152 ~~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 152 RPGRVTVRIGEPIPPEG 168 (184)
T ss_pred CCCcEEEEEcCCcChhh
Confidence 44589999999999864
No 42
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.53 E-value=8.2e-14 Score=142.37 Aligned_cols=117 Identities=22% Similarity=0.194 Sum_probs=82.5
Q ss_pred hhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCc-cceeeecccccccc-----ccc----CCeeEeec
Q 010860 281 MLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRK-VSCVTYSVSKLSRF-----LSP----IPAIALTR 350 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~-~~~v~~~v~k~~~~-----~~~----~~~i~i~R 350 (499)
+.|+++++.| ++++. ++++|++|||+|++|.+++.++..+. ...-.+++.| .++ ++| .|.++++|
T Consensus 76 ~~gvkv~v~G-e~l~~---~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K-~eL~~iP~~Gw~~~~~g~I~v~R 150 (374)
T PLN02510 76 INKTKVVFSG-DKVPP---EERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLK-SSLMKLPVFGWAFHIFEFIPVER 150 (374)
T ss_pred hcCeEEEEEe-ecCCC---CCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEe-HHHhhchHHHHHHHHcCCeeeeC
Confidence 4899999999 55543 47899999999999999998765221 0111345565 333 333 38999999
Q ss_pred CCH---HHHHHHHHHhhCC--C--EEEecCCeecCCCcccccchhhhhcCCcEEEEEEe
Q 010860 351 DRA---ADAARISELLQKG--D--LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVN 402 (499)
Q Consensus 351 ~~~---~~~~~~~~~l~~G--~--l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~ 402 (499)
+.+ +.++++.+.++++ + ++|||||||+..+....++.++.+.|+||+.-.+.
T Consensus 151 ~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 151 KWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred CccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEc
Confidence 754 3445555566653 2 99999999997777777777777788887776663
No 43
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.51 E-value=2.3e-14 Score=134.75 Aligned_cols=116 Identities=23% Similarity=0.227 Sum_probs=77.9
Q ss_pred hhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccc-eeeecccccccc-----cccC----CeeEeec
Q 010860 281 MLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVS-CVTYSVSKLSRF-----LSPI----PAIALTR 350 (499)
Q Consensus 281 ~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~-~v~~~v~k~~~~-----~~~~----~~i~i~R 350 (499)
++|++++++|.++.++ ++++|++|||+|++|.+++.++..+.-. .-..++.| .++ ++|+ +.++++|
T Consensus 7 ~~g~~i~v~G~~~~~~---~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K-~~l~~~p~~g~~~~~~~~i~v~R 82 (193)
T cd07990 7 LSGVKVVVYGDEPKLP---KERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLK-DSLKYPPLGGWGWQLGEFIFLKR 82 (193)
T ss_pred ecCeEEEEEecCccCC---CccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeeh-hhhhcCChhhHHHhhCeeEEEEC
Confidence 4799999999998743 4789999999999999999998843210 11345555 332 3333 7999999
Q ss_pred CCHHHHHHHH---HHhhC---CC-EEEecCCeecCCCcccccchhhhhcCCcEEEEE
Q 010860 351 DRAADAARIS---ELLQK---GD-LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVA 400 (499)
Q Consensus 351 ~~~~~~~~~~---~~l~~---G~-l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~ 400 (499)
+.+++.+.++ +.+++ |. ++|||||||++.+.+.+++..+.+.+.|+.+-+
T Consensus 83 ~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~~~~a~k~~~p~l~~v 139 (193)
T cd07990 83 KWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERSQEFAEKNGLPPLKHV 139 (193)
T ss_pred ChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHHHHHHHHcCCCCccee
Confidence 7655544443 33443 54 999999999987766655443444444444433
No 44
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.44 E-value=2.4e-13 Score=148.97 Aligned_cols=144 Identities=15% Similarity=0.085 Sum_probs=92.7
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-----cc----cCCeeEeecCCHH--HH----H-HHHHHh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-----LS----PIPAIALTRDRAA--DA----A-RISELL 363 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-----~~----~~~~i~i~R~~~~--~~----~-~~~~~l 363 (499)
+.|+|+|+||.|++|.+++..++...-.....++++ .++ ++ ..|.+||+|+.+. .. + -+.+.+
T Consensus 628 ~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAG-dNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LL 706 (1108)
T PTZ00374 628 RVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAG-DDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLV 706 (1108)
T ss_pred CCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEc-hhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHH
Confidence 369999999999999999998874210011234454 332 23 3499999996432 12 2 235668
Q ss_pred hCCC-EEEecCCeecCCCcccccchhhh----hc---------CCcEEEEEEeeccCCccccc----cCCc-ccccccc-
Q 010860 364 QKGD-LVVCPEGTTCRENFLLRFSALFA----EM---------SDRIVPVAVNCKQNMFYGTT----VRGV-KFWDPYF- 423 (499)
Q Consensus 364 ~~G~-l~IFPEGTrt~~~~l~~Fk~~~~----~~---------~~pVvPV~I~~~~~~~~~~~----~~~~-~~~~~~~- 423 (499)
++|. +.+|||||||+++.++++|.+.. ++ +++||||+|+|..-+ .... ..|. +.-+.+.
T Consensus 707 k~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVl-E~elyakEl~G~kK~kEsl~~ 785 (1108)
T PTZ00374 707 LRRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELL-ETTLYAKEQLGVSKPKENPGN 785 (1108)
T ss_pred hCCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhh-hHHHHHHHhcCCCCCCCCHHH
Confidence 8885 99999999999999999994321 12 679999999998521 1110 0111 1111111
Q ss_pred ------cccCCCCeEEEEEccccCCccc
Q 010860 424 ------FFMNPRPTYEVTFLDRLPEEMT 445 (499)
Q Consensus 424 ------~~~~~~~~v~v~~l~pi~~~~~ 445 (499)
.+....+++.|.|++|++..++
T Consensus 786 llk~ir~L~~~~GrV~V~FGEPISLrey 813 (1108)
T PTZ00374 786 LLRARSLLKRRHGKIHVHIGEPVSLRSF 813 (1108)
T ss_pred HHHHHHHHhccCceEEEECCCCccHHHH
Confidence 1224456999999999987765
No 45
>PLN02954 phosphoserine phosphatase
Probab=99.44 E-value=1.9e-12 Score=124.41 Aligned_cols=103 Identities=16% Similarity=0.088 Sum_probs=78.4
Q ss_pred hccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--EEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 108 DVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 108 ~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
.++|.+. ++++++| .++|||++++.+++++++. +|++ +++++.+.+.+ +|+++|.......+.+..|...++
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~-~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGD-SGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcC-CCcEECccCCCcccCCccHHHHHH
Confidence 3555544 4788999 9999999999999999999 9996 69999888864 788888654322235677888777
Q ss_pred HHhCC--CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 182 KEFGE--DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 182 ~~~~~--~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
.+... ...++++|||.+|+.+.+.++..+.+
T Consensus 162 ~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~ 194 (224)
T PLN02954 162 HIKKKHGYKTMVMIGDGATDLEARKPGGADLFI 194 (224)
T ss_pred HHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEE
Confidence 65432 13578999999999997776666555
No 46
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=99.43 E-value=1.2e-13 Score=147.20 Aligned_cols=187 Identities=14% Similarity=0.069 Sum_probs=115.1
Q ss_pred HhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccc-------cccccccCCeeEeecCC
Q 010860 280 EMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK-------LSRFLSPIPAIALTRDR 352 (499)
Q Consensus 280 ~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k-------~~~~~~~~~~i~i~R~~ 352 (499)
++..+++...+.+.+.+-..+.|.|+|+||+|++|.+++..+++.......++++. +..++...|.+|+.|..
T Consensus 94 r~Y~v~v~~~~~~~lr~~~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRsf 173 (621)
T PRK11915 94 RAYDVLVDEDQITQLRKLDRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQT 173 (621)
T ss_pred HHHeEEeCHHHHHHHHHhccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccCC
Confidence 33445555555444321113579999999999999999998763321111122211 11223445999998843
Q ss_pred HH------HH-HHHHHHhhCC-CEEEecCCeecCCCcccccc-hhhh----------hcCCcEEEEEEeeccCCccccc-
Q 010860 353 AA------DA-ARISELLQKG-DLVVCPEGTTCRENFLLRFS-ALFA----------EMSDRIVPVAVNCKQNMFYGTT- 412 (499)
Q Consensus 353 ~~------~~-~~~~~~l~~G-~l~IFPEGTrt~~~~l~~Fk-~~~~----------~~~~pVvPV~I~~~~~~~~~~~- 412 (499)
+. .. +-+...+++| ++.+|||||||+++.+++=| ++.. ..+++||||+|.|.+-+ ....
T Consensus 174 ~~~~LY~~vl~eYi~~ll~~G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~-E~~~y 252 (621)
T PRK11915 174 KDIPVYRFVLRAYAAQLVQNHVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLH-EVEAM 252 (621)
T ss_pred CCchHHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccc-cHHHH
Confidence 22 23 4567788889 59999999999999999866 3322 25789999999998632 2211
Q ss_pred ---c-CCcccccccc-------cccCCCCeEEEEEccccCCcccccC-------CCCCHHHHHHHHHHHHHHh
Q 010860 413 ---V-RGVKFWDPYF-------FFMNPRPTYEVTFLDRLPEEMTCKA-------GGKSAIEVANYVQKVLGDV 467 (499)
Q Consensus 413 ---~-~~~~~~~~~~-------~~~~~~~~v~v~~l~pi~~~~~~~~-------~~~~~~~la~~v~~~i~~~ 467 (499)
. .+.|-.+.++ .+....+.+.|.|++|++..+++.. .+...+.++.+|...|.+.
T Consensus 253 ~~El~G~~K~~Esl~~l~~~~~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~ 325 (621)
T PRK11915 253 TTEAYGAVKRPEDLRFLVRLARQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRA 325 (621)
T ss_pred HHHhcCCCCCccHHHHHHHHHHHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhc
Confidence 0 1111112211 1223456999999999998765321 1134566777777777665
No 47
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.42 E-value=5.8e-13 Score=136.11 Aligned_cols=102 Identities=22% Similarity=0.174 Sum_probs=68.6
Q ss_pred HhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCcc-ceeeecccccccc-----ccc----CCeeEee
Q 010860 280 EMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKV-SCVTYSVSKLSRF-----LSP----IPAIALT 349 (499)
Q Consensus 280 ~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~-~~v~~~v~k~~~~-----~~~----~~~i~i~ 349 (499)
+.+|++++|+|.+.......++++|++|||+|++|++++....++.- ..-..++.| .++ ++| .+.++++
T Consensus 63 ~~~Gvkv~V~gd~~~~~~~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlK-keL~~iPv~Gw~~~~~~~IfId 141 (376)
T PLN02380 63 WWAGVKVQLYADEETFELMGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMK-KSSKFLPVIGWSMWFSEYVFLE 141 (376)
T ss_pred HcCCeEEEEEecchhhccCCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeH-HHhhhccHHHHHHHHcCCEEec
Confidence 45899999999775321012357999999999999999988764320 001234555 333 444 2899999
Q ss_pred cCCHHHHHHH---HHHhhC---CC-EEEecCCeecCCCcc
Q 010860 350 RDRAADAARI---SELLQK---GD-LVVCPEGTTCRENFL 382 (499)
Q Consensus 350 R~~~~~~~~~---~~~l~~---G~-l~IFPEGTrt~~~~l 382 (499)
|+.+++.+.+ .+.+++ |. ++|||||||+....+
T Consensus 142 R~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~ 181 (376)
T PLN02380 142 RSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKL 181 (376)
T ss_pred CCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchhh
Confidence 9875554433 445665 43 999999999876554
No 48
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.38 E-value=1.2e-12 Score=111.93 Aligned_cols=101 Identities=35% Similarity=0.478 Sum_probs=71.4
Q ss_pred eEEEecCCCCChHHHHHHHhCC---ccceeee-ccccccc---ccccCCeeEeecCCH-HHH---HHHHHHhhCCC-EEE
Q 010860 303 NLYVCNHRTPLDPIVIAIALGR---KVSCVTY-SVSKLSR---FLSPIPAIALTRDRA-ADA---ARISELLQKGD-LVV 370 (499)
Q Consensus 303 ~iiVaNH~S~lD~~~l~~~~~~---~~~~v~~-~v~k~~~---~~~~~~~i~i~R~~~-~~~---~~~~~~l~~G~-l~I 370 (499)
+|+|+||+|++|.+++...+++ +...+.. .+.+.+. ++...|+++++|... ... +.+.+.+++|. ++|
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999999864 2111111 1122121 234459999998654 333 34455677775 999
Q ss_pred ecCCeecCCCcccccchhhh----hcCCcEEEEEEee
Q 010860 371 CPEGTTCRENFLLRFSALFA----EMSDRIVPVAVNC 403 (499)
Q Consensus 371 FPEGTrt~~~~l~~Fk~~~~----~~~~pVvPV~I~~ 403 (499)
||||++++...+.+|+.+++ +.+.||+||++.|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 99999998888889996544 3689999999986
No 49
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.36 E-value=9.5e-12 Score=119.30 Aligned_cols=96 Identities=16% Similarity=0.116 Sum_probs=72.2
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhc-CCcEEEeCeEEEecCCCceeeeEecCCcc------cchhHHHHHHHH
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFL-GGDKVLGTEIEVNPRTKRATGFVKRPGVL------VGKWKKLAVLKE 183 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~l-g~d~vigt~l~~~~~~g~~tG~~~~~~~~------~g~~K~~~l~~~ 183 (499)
+.+++++++| +++|||++++.+++++.+. + ..+.++|++..+. ++..+..... ++. .|..|...++++
T Consensus 81 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~--~~~~~~~kp~-p~~~~~~~~~~~~K~~~l~~~ 156 (219)
T PRK09552 81 EFVQFVKENNIPFYVVSGGMDFFVYPLLQG-LIPKEQIYCNGSDFS--GEYITITWPH-PCDEHCQNHCGCCKPSLIRKL 156 (219)
T ss_pred HHHHHHHHcCCeEEEECCCcHHHHHHHHHH-hCCcCcEEEeEEEec--CCeeEEeccC-CccccccccCCCchHHHHHHh
Confidence 4556889999 9999999999999999998 5 2256888888776 4554443322 110 145688888876
Q ss_pred hCCCCCeEEEeCCcCcHHHHhccccCee
Q 010860 184 FGEDAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 184 ~~~~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
-.....++++|||.+|+++.+.|+..++
T Consensus 157 ~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 157 SDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 4444468899999999999999999776
No 50
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.36 E-value=4.5e-12 Score=118.71 Aligned_cols=155 Identities=16% Similarity=0.201 Sum_probs=108.6
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.++++.. ..++|+|+++||.|.+|.+...... +.++..+.... +.+.+ + ...|...|+|+ ..
T Consensus 3 ~~~i~~~e~l~~~~~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~r~~~g~~~i~~~--~~ 79 (192)
T cd07984 3 RVEREGLEHLEAALAKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPL-KNPLLDRLITRGRERFGARLIPRG--GG 79 (192)
T ss_pred eeEecCHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECC-CCHHHHHHHHHHHHhcCCeeEcCC--ch
Confidence 5678888776420 1247999999999999998877665 44533333222 21211 2 12367778775 57
Q ss_pred HHHHHHHhhCCC-EEEecCCeecCCC-ccccc-------chhh----hhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTCREN-FLLRF-------SALF----AEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt~~~-~l~~F-------k~~~----~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+..+.+.+++|. ++|||||+++..+ ...+| +.++ ..+++||+|+.+.++.
T Consensus 80 ~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------------- 142 (192)
T cd07984 80 LRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------------- 142 (192)
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------------
Confidence 778888999996 9999999998654 45555 4333 3379999999996542
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCC
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGF 470 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~ 470 (499)
.++++|++++|+++. ..++.+++++++.+.+++....
T Consensus 143 ------~~~~~i~~~~~i~~~-----~~~~~~~~~~~~~~~lE~~i~~ 179 (192)
T cd07984 143 ------GGGYRIEFEPPLENP-----PSEDVEEDTQRLNDALEAAIRE 179 (192)
T ss_pred ------CCCEEEEEeCCCCCC-----CCCCHHHHHHHHHHHHHHHHHh
Confidence 125899999999875 3578889999999988887643
No 51
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.35 E-value=1.9e-11 Score=115.76 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=85.7
Q ss_pred hcCCCHHHHHHHHHHHhhhHHHhhccHH---HHHHHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCce
Q 010860 85 FSGLKIRDIELASRAVLPRFYAADVRKE---SYEVFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRA 161 (499)
Q Consensus 85 l~G~~~~~l~~~~~~~~~~~~~~~i~~~---~~~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~ 161 (499)
-.|++.++++...+.. ..+|. .++.++++.+++|+|+++..+++++.++ +|++.++++.+.+.+ +|.+
T Consensus 52 ~~~~~~~~i~~~~~~~-------~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~-~~~i 122 (205)
T PRK13582 52 EHGLGLADIQEVIATL-------DPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDE-DGMI 122 (205)
T ss_pred HcCCCHHHHHHHHHhC-------CCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECC-CCeE
Confidence 3467888886554432 12344 4445554468889999999999999999 999999998888753 6767
Q ss_pred eeeEecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 162 TGFVKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 162 tG~~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
+|.-.. .++.|...++++-.....++++|||.+|+++.+.++.++.++++.
T Consensus 123 ~~~~~~----~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~ 173 (205)
T PRK13582 123 TGYDLR----QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPA 173 (205)
T ss_pred ECcccc----ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCH
Confidence 775421 245676766654332335789999999999999999988877654
No 52
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.28 E-value=3.2e-11 Score=108.98 Aligned_cols=168 Identities=13% Similarity=0.078 Sum_probs=110.0
Q ss_pred CCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChhHHHHHHHHHHhcCCCHHHHHHHHH
Q 010860 19 AYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEAIGIQILIFISFSGLKIRDIELASR 98 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l~~~~~ 98 (499)
..++++||+|.|++.. .....+..++ +.- .... ...-.+|..-.+-...+++. ...++|..++-.+
T Consensus 15 ~~~aVcFDvDSTvi~e-EgIdelA~~~---G~~-~~Va----~~T~rAMng~~~F~eaL~~R-l~llqp~~~qv~~---- 80 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQE-EGIDELAAYC---GVG-EAVA----EVTRRAMNGEADFQEALAAR-LSLLQPLQVQVEQ---- 80 (227)
T ss_pred hcCeEEEecCcchhHH-hhHHHHHHHh---Cch-HHHH----HHHHHHhCCCCcHHHHHHHH-HHHhcccHHHHHH----
Confidence 5679999999999994 4455555442 210 1000 00111132222322223322 2467776544332
Q ss_pred HHhhhHHHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE--EEeCeEEEecCCCceee-eEecCCcc
Q 010860 99 AVLPRFYAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK--VLGTEIEVNPRTKRATG-FVKRPGVL 171 (499)
Q Consensus 99 ~~~~~~~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~--vigt~l~~~~~~g~~tG-~~~~~~~~ 171 (499)
+..+. .+.+.|.+.+ .++++| .++++||+++.+++|++.+ ||++. +.|+.+.++. +|+|+| ...+| ..
T Consensus 81 -~v~~~-k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~-~Gk~~gfd~~~p-ts 155 (227)
T KOG1615|consen 81 -FVIKQ-KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDK-DGKYLGFDTNEP-TS 155 (227)
T ss_pred -HHhcC-CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeecc-CCcccccccCCc-cc
Confidence 32221 2344444444 688999 9999999999999999999 99987 9999999975 899988 66664 44
Q ss_pred cchhHHHHHHHHhC-CCC-CeEEEeCCcCcHHHHhc
Q 010860 172 VGKWKKLAVLKEFG-EDA-PDLGIGDRQTDHDFMSI 205 (499)
Q Consensus 172 ~g~~K~~~l~~~~~-~~~-~~~aygDS~~D~pmL~~ 205 (499)
.+.+|.+.|+..-. .++ .....||+.+|++++.-
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCc
Confidence 88999988877654 222 35689999999998765
No 53
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.24 E-value=3e-10 Score=105.61 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=84.6
Q ss_pred cCCCHHHHHHHHHHHhhhHHHhhccHH---HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecC
Q 010860 86 SGLKIRDIELASRAVLPRFYAADVRKE---SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPR 157 (499)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~i~~~---~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~ 157 (499)
.+.+.+++.+..+. -.++|+ .++.++++| .++|+|++....++.+.+. +|+ +.+++++..++.
T Consensus 57 ~~~~~~~~~~~~~~-------~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~- 127 (188)
T TIGR01489 57 SGLKEDEILEVLKS-------APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDN- 127 (188)
T ss_pred cCCCHHHHHHHHHh-------CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECC-
Confidence 46666666554432 123343 445788899 9999999999999999998 886 478999988864
Q ss_pred CCceeeeEecC----CcccchhHHHHHHHHhCC-CCCeEEEeCCcCcHHHHhccccCee
Q 010860 158 TKRATGFVKRP----GVLVGKWKKLAVLKEFGE-DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 158 ~g~~tG~~~~~----~~~~g~~K~~~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+|++++..... .+..|..|.+.++++... ...++++|||.+|+.+.+.|+..++
T Consensus 128 ~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 128 DGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 78888765431 112466787777776543 4457899999999999998876654
No 54
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=99.00 E-value=6.8e-10 Score=111.11 Aligned_cols=186 Identities=18% Similarity=0.223 Sum_probs=118.8
Q ss_pred hcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceee-------ecccccccccccCCeeEeecCCHH
Q 010860 282 LGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVT-------YSVSKLSRFLSPIPAIALTRDRAA 354 (499)
Q Consensus 282 ~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~-------~~v~k~~~~~~~~~~i~i~R~~~~ 354 (499)
+-.++.-.+.+..++ .+.+.|+||.|.+|..++...- +-..+. ..+.. .+..+-..+..+|..-+
T Consensus 122 ~~~~i~~~~~~~~~~----~g~i~v~nh~Sp~d~~vls~~~--~~~~v~q~~~~~v~viq~--~~~~~s~~~~f~~~e~~ 193 (354)
T KOG2898|consen 122 KSLRISFHDELLLFP----EGGICVANHFSPWDVLVLSVDN--CYALVGQVHGGLVGVIQL--ALSRASLHFWFERLEFT 193 (354)
T ss_pred hhhhhcccChhhcCC----CCCCceecccCceeEEEecccc--chheeeecccceEEEeee--hhhhhchhhhhhcchhh
Confidence 333445555555432 3479999999999998887661 101111 00000 00112245555554333
Q ss_pred HH----HHHHHHhhCC---CEEEecCCeecCCCcccccc-hhhhhcCCcEEEEEEeeccCCcccccc-CCcccccccccc
Q 010860 355 DA----ARISELLQKG---DLVVCPEGTTCRENFLLRFS-ALFAEMSDRIVPVAVNCKQNMFYGTTV-RGVKFWDPYFFF 425 (499)
Q Consensus 355 ~~----~~~~~~l~~G---~l~IFPEGTrt~~~~l~~Fk-~~~~~~~~pVvPV~I~~~~~~~~~~~~-~~~~~~~~~~~~ 425 (499)
+. +..++.+.++ ++++|||||+.|+..+..|+ .+-++.+..|.|++|+|..++.+..+. ....+....+.+
T Consensus 194 d~~~~~~~~~e~~~~~~~~~ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~f~~s~~~s~~~~l~~~ 273 (354)
T KOG2898|consen 194 DRQVVAKRLAEHVWNERKEPILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDAFWNSPELSFTRYLLEL 273 (354)
T ss_pred hhHhhhhhhhHHHhcCCCCcEEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCccccccccCCccccHHHHHHHH
Confidence 33 2445555444 49999999999999999999 888888999999999999875433321 111222223333
Q ss_pred cCCCC-eEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCCCHHHH
Q 010860 426 MNPRP-TYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGLTRKDK 480 (499)
Q Consensus 426 ~~~~~-~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk 480 (499)
+.... ...+.+++|+... .++|.-++++++...++...+......+..-|
T Consensus 274 ~ts~~~v~~i~~l~~~~r~-----~~et~t~~a~~v~~~ig~~~gl~~~~~dg~lk 324 (354)
T KOG2898|consen 274 MTSWAIVCDIWYLPPMRRD-----NDETATQFANRVKSLIGKSAGLKDLEWDGLLK 324 (354)
T ss_pred HhhhheeeeeeecccEEee-----cccchhHHHHHHHHHHHHhhCCcccCcCCcee
Confidence 33333 5678999999986 47899999999999999998877665544444
No 55
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.97 E-value=3.1e-10 Score=109.60 Aligned_cols=175 Identities=9% Similarity=-0.062 Sum_probs=118.6
Q ss_pred eEEEec-CCCCChHHHHHHHhCCccceeeecccc-cccc---cccCCeeEeecCC----HHHHHHHHH-HhhCC--C-EE
Q 010860 303 NLYVCN-HRTPLDPIVIAIALGRKVSCVTYSVSK-LSRF---LSPIPAIALTRDR----AADAARISE-LLQKG--D-LV 369 (499)
Q Consensus 303 ~iiVaN-H~S~lD~~~l~~~~~~~~~~v~~~v~k-~~~~---~~~~~~i~i~R~~----~~~~~~~~~-~l~~G--~-l~ 369 (499)
...++| |.|..|-.++.+... + ..++.-..| ++.+ ...+..+++.|.. +..++.+.. .++.| + |+
T Consensus 8 ~~~~s~p~ss~~d~~~~~s~s~-~-s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIl 85 (412)
T KOG4666|consen 8 LNSNSNPPSSKEDRPLLKSESD-L-AAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSIL 85 (412)
T ss_pred ccccCCCCccccccchhhhccc-H-HHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceee
Confidence 355566 888888776655431 1 111222221 1211 2223456666632 334444433 34555 3 99
Q ss_pred EecCCeecCCCcccccchhhhhcCCcEEEEEEeeccCCccccccCCcccccccccccCCC-CeEEEEEccccCCcccccC
Q 010860 370 VCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMNPR-PTYEVTFLDRLPEEMTCKA 448 (499)
Q Consensus 370 IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~l~pi~~~~~~~~ 448 (499)
||||||++ .+.-||++++..+.|+|||.++|...+-+.++|++..+.+..|++++.. ..+.+.|.+.-.++..
T Consensus 86 l~~~~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~e--- 159 (412)
T KOG4666|consen 86 LLYYLICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD--- 159 (412)
T ss_pred eeeccceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChh---
Confidence 99999998 7889999999999999999999988765555556656677777665443 3789999977666532
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCcccCCCHHHHHHhhc
Q 010860 449 GGKSAIEVANYVQKVLGDVLGFECTGLTRKDKYMLLG 485 (499)
Q Consensus 449 ~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk~~~l~ 485 (499)
+..|+.-++..++..|+++||.+.++.|.+|=...++
T Consensus 160 e~~d~~~~at~v~~~maealg~~vtd~t~edc~l~vs 196 (412)
T KOG4666|consen 160 SDMDSNPKTTSTEINMAEALGTEVTDRTGEDCSLHVS 196 (412)
T ss_pred hhcCCcccchhHHHHHHHhhCCCCCCCchHHHHHHHh
Confidence 4467888999999999999999999999999765443
No 56
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.83 E-value=5.3e-08 Score=95.55 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=85.6
Q ss_pred HHhcCC--CHHHHHHHHHHHhhhHHHhhccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc----EEEeCeEEEe
Q 010860 83 ISFSGL--KIRDIELASRAVLPRFYAADVRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD----KVLGTEIEVN 155 (499)
Q Consensus 83 ~~l~G~--~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d----~vigt~l~~~ 155 (499)
..+.|. +.++++++.++.--+. .+ -..+.++.++++| .++|+||++...+++++++ +|++ +++++++.+.
T Consensus 99 ~l~~~~~~~~e~i~~~v~~~~l~l-~p-G~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~ 175 (277)
T TIGR01544 99 GLLVQQAFPKAKIKEIVAESDVML-KD-GYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFD 175 (277)
T ss_pred HHHhcCCCCHHHHHHHHhhcCCcc-Cc-CHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEEC
Confidence 456665 8888877665211010 11 1245556889999 9999999999999999999 8884 8999999996
Q ss_pred cCCCceeeeEecCCcccchhHHHHHHH----HhCC---CCCeEEEeCCcCcHHHHhcc
Q 010860 156 PRTKRATGFVKRPGVLVGKWKKLAVLK----EFGE---DAPDLGIGDRQTDHDFMSIC 206 (499)
Q Consensus 156 ~~~g~~tG~~~~~~~~~g~~K~~~l~~----~~~~---~~~~~aygDS~~D~pmL~~a 206 (499)
+ +|++||. .+| .....+|.+.+.+ .++. ...+++.|||.+|++|..-+
T Consensus 176 ~-dGvltG~-~~P-~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 176 E-DGVLKGF-KGP-LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred C-CCeEeCC-CCC-cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 4 8999994 564 3477888876553 3341 23578999999999996655
No 57
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.83 E-value=2.4e-08 Score=94.93 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHhhhHH---H--hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE----EEeCeEEE
Q 010860 88 LKIRDIELASRAVLPRFY---A--ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK----VLGTEIEV 154 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~---~--~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~----vigt~l~~ 154 (499)
.+.++++++.+.|...+. . ..++|.+.+ .++++| ++.|+|++....++.+.++ +|+.. ++|++-
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-- 136 (213)
T TIGR01449 60 PDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDS-- 136 (213)
T ss_pred cChHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCC--
Confidence 455556665555543321 1 134555554 688899 9999999999999999999 88743 222210
Q ss_pred ecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 155 NPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 155 ~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
. +. ..+ ..+-...+.+.++.. ..++++|||.+|+.+.+.+|-+++
T Consensus 137 -----~--~~--~Kp---~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 137 -----L--AQ--RKP---HPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred -----C--CC--CCC---ChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 0 00 001 011223344444532 247899999999999999997765
No 58
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]
Probab=98.82 E-value=7.7e-09 Score=97.01 Aligned_cols=150 Identities=17% Similarity=0.155 Sum_probs=92.0
Q ss_pred EEEEcCCCCC----CCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeec----ccc------c---ccccccCCeeE
Q 010860 285 HLVIRGNPPP----APSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYS----VSK------L---SRFLSPIPAIA 347 (499)
Q Consensus 285 ~v~v~G~~~~----p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~----v~k------~---~~~~~~~~~i~ 347 (499)
+..|+|.|.+ ....++.|.|=|+||.|.+|-..+.+.++-+.++..+- ++. . +.+.+...|++
T Consensus 49 k~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFslGkclP 128 (286)
T KOG2847|consen 49 KLLVHNRETLTALLESRPPNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFSLGKCLP 128 (286)
T ss_pred ccccccHHHHHHHHHcCCCCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHhcCceEe
Confidence 4566665531 00023689999999999999999988885432221110 000 0 00122236999
Q ss_pred eecCC---HHHHHHHHHHhhCCC-EEEecCCeec-CCCcccccchhhhh--cCCcEE----EEEEeeccCCccccccCCc
Q 010860 348 LTRDR---AADAARISELLQKGD-LVVCPEGTTC-RENFLLRFSALFAE--MSDRIV----PVAVNCKQNMFYGTTVRGV 416 (499)
Q Consensus 348 i~R~~---~~~~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~~~~~--~~~pVv----PV~I~~~~~~~~~~~~~~~ 416 (499)
+.|+. .+.+..+.+.|..|. |.|||||-.+ -+..++.||-|... +.+|.. |+.-.+-..+++ .+.
T Consensus 129 i~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P----~~~ 204 (286)
T KOG2847|consen 129 IVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMP----EAP 204 (286)
T ss_pred eeccCccccccHHHHHHhcCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHhCc----cCC
Confidence 99965 356778888899998 9999999998 56689999943322 344444 444443332221 111
Q ss_pred ccccccccccCCCCeEEEEEccccCCcc
Q 010860 417 KFWDPYFFFMNPRPTYEVTFLDRLPEEM 444 (499)
Q Consensus 417 ~~~~~~~~~~~~~~~v~v~~l~pi~~~~ 444 (499)
. .+.+.+.+++|++++|+..++
T Consensus 205 p------~vp~~Gk~vtV~IG~P~~~~d 226 (286)
T KOG2847|consen 205 P------YVPRFGKTVTVTIGDPINFDD 226 (286)
T ss_pred C------ccCCCCCEEEEEeCCCcchhH
Confidence 0 112333499999999998754
No 59
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.79 E-value=6.9e-08 Score=92.62 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=63.0
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++|.+.+ .++++| +++|+|++....++++.++ +|+++.+...+... ....++ +. .+-..++.+.+
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~---~~~~~K----p~---~~~~~~~~~~~ 161 (222)
T PRK10826 93 LLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAE---KLPYSK----PH---PEVYLNCAAKL 161 (222)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcc---cCCCCC----CC---HHHHHHHHHHc
Confidence 4555554 788999 9999999999999999999 99765543222111 111111 11 11223333344
Q ss_pred CCC-CCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 185 GED-APDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 185 ~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
|.. ..++.+|||.+|++..+.+|-+.+.-++.
T Consensus 162 ~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 162 GVDPLTCVALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred CCCHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence 532 24789999999999999999776665544
No 60
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.77 E-value=7.9e-08 Score=92.12 Aligned_cols=110 Identities=16% Similarity=0.112 Sum_probs=69.1
Q ss_pred CCCHHHHHHHHHHHhhhHHH-----hhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecC
Q 010860 87 GLKIRDIELASRAVLPRFYA-----ADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPR 157 (499)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~-----~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~ 157 (499)
+.+.++++++.+.+...+.. ..++|++. +.++++| .++|+|++....++++++. +|++..+. . .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~-~-~---- 139 (226)
T PRK13222 67 EPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFS-V-V---- 139 (226)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCcc-E-E----
Confidence 46677777666665543311 22445444 4688899 9999999999999999998 88754321 1 1
Q ss_pred CCceeeeEecCCcccchhH--H---HHHHHHhCC-CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 158 TKRATGFVKRPGVLVGKWK--K---LAVLKEFGE-DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 158 ~g~~tG~~~~~~~~~g~~K--~---~~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
+++. . .+..| . ..+.+.++. ...++.+|||.+|+.+.+.+|-..+.
T Consensus 140 ---~~~~-----~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 140 ---IGGD-----S-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ---EcCC-----C-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 1110 0 11122 2 233333443 23578999999999999999985443
No 61
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.70 E-value=3.2e-08 Score=85.85 Aligned_cols=95 Identities=19% Similarity=0.134 Sum_probs=58.4
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcc---cchhHHHHHHHHh
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVL---VGKWKKLAVLKEF 184 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~---~g~~K~~~l~~~~ 184 (499)
.++.++++| .++++|++....++.+++. +|+ +.++++...... .+.-.+......+. ...++...+.+.+
T Consensus 32 ~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (139)
T cd01427 32 ALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIY-YPKEGLFLGGGPFDIGKPNPDKLLAALKLL 109 (139)
T ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhh-cccccccccccccccCCCCHHHHHHHHHHc
Confidence 344677889 9999999999999999998 886 556655533210 00000000000011 2234445555555
Q ss_pred CCC-CCeEEEeCCcCcHHHHhccccC
Q 010860 185 GED-APDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 185 ~~~-~~~~aygDS~~D~pmL~~a~~~ 209 (499)
+.. ..++++|||.+|+++++.++..
T Consensus 110 ~~~~~~~~~igD~~~d~~~~~~~g~~ 135 (139)
T cd01427 110 GVDPEEVLMVGDSLNDIEMAKAAGGL 135 (139)
T ss_pred CCChhhEEEeCCCHHHHHHHHHcCCc
Confidence 532 3578999999999999985543
No 62
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.68 E-value=4.8e-07 Score=86.90 Aligned_cols=177 Identities=15% Similarity=0.140 Sum_probs=96.2
Q ss_pred EEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHHHHHHHhhcCChh-HHHHHHHHH-HhcCCCHHHHHHHHHH
Q 010860 22 SIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLPIAIIAYLFISEA-IGIQILIFI-SFSGLKIRDIELASRA 99 (499)
Q Consensus 22 ~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~-~l~G~~~~~l~~~~~~ 99 (499)
+++||||+||++.||.- ++... +........+.. .++ . ..+ ..+.+++.. .-.|.+.+++.+..+.
T Consensus 2 LvvfDFD~TIvd~dsd~-~v~~~-l~~~~~~~~l~~--~~~-------~-~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ 69 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDD-WVIEL-LPPEELPEELRE--SYP-------K-GGWTEYMDRVLQLLHEQGVTPEDIRDALRS 69 (234)
T ss_pred EEEEeCCCCccCCccHH-HHHHh-cCCcccHHHHHH--hcc-------c-cchHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 79999999999988753 44433 221111111111 111 0 011 112222211 2348999999766653
Q ss_pred HhhhHHHhhccHHHHHHH--HhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCccc
Q 010860 100 VLPRFYAADVRKESYEVF--DKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLV 172 (499)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~--~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~ 172 (499)
.= +.+.+ .++++.+ .+.| .++|+|-|.+++++-|.+. .|+ +.|+++...+++ +|+++=.-...+.|.
T Consensus 70 ip---~~pgm-~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~-~G~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 70 IP---IDPGM-KELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDA-DGRLRVRPYHSHGCS 143 (234)
T ss_pred CC---CCccH-HHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecC-CceEEEeCccCCCCC
Confidence 21 11111 3444445 3568 9999999999999999998 786 467888888864 677541111001111
Q ss_pred ----chhHHHHHHHHhCC------CC-CeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 173 ----GKWKKLAVLKEFGE------DA-PDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 173 ----g~~K~~~l~~~~~~------~~-~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
.-=|-..|+++... .+ ..++.||+.||+--...-+..=+|-|.+
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 11255555554421 22 3456799999986554444443444433
No 63
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.65 E-value=2.3e-07 Score=91.95 Aligned_cols=112 Identities=17% Similarity=0.115 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHHhhhHHH----hhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCC
Q 010860 87 GLKIRDIELASRAVLPRFYA----ADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRT 158 (499)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~----~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~ 158 (499)
+.+.+..+++.+.|.+.+.. ..++|.+. +.++++| +++|+|+++...++++.++ +|+++.... +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~-i------ 147 (272)
T PRK13223 76 GVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRW-I------ 147 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeE-E------
Confidence 44555555555544433211 12455554 4688899 9999999999999999988 887543211 1
Q ss_pred CceeeeEecCCcccchhHHHHHHHHhCC-CCCeEEEeCCcCcHHHHhccccC
Q 010860 159 KRATGFVKRPGVLVGKWKKLAVLKEFGE-DAPDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 159 g~~tG~~~~~~~~~g~~K~~~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~ 209 (499)
+++.-.+..- ...+-...+.+.+|. ...++++|||.+|+.+.+.+|-.
T Consensus 148 --~~~d~~~~~K-p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 148 --IGGDTLPQKK-PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred --EecCCCCCCC-CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCe
Confidence 1111000000 011122334444553 23588999999999999999974
No 64
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.56 E-value=1.9e-06 Score=79.97 Aligned_cols=171 Identities=13% Similarity=0.087 Sum_probs=94.3
Q ss_pred CCCCeEEEEecCCceeecCCchHHHHHHHHHhcchHHHHHHHhhHH---HHHHHhhcCChhHHHHHHHHHHhcCCCHHHH
Q 010860 17 GSAYGSIAADLDGTLLVSRSSFPYFMLVAVEAGGLLRGLALLVSLP---IAIIAYLFISEAIGIQILIFISFSGLKIRDI 93 (499)
Q Consensus 17 ~~~~~~avFD~DgTL~~~~s~~~~~~~~~~~~~~~~r~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~l 93 (499)
+.+..+++||||.||++.||... .... ..... ....+...+| +..++ +..++++ -=.|.+++++
T Consensus 10 ~~~ril~~FDFD~TIid~dSD~w-Vv~~-lp~~~--l~~qL~~t~p~~~Wne~M------~rv~k~L---heqgv~~~~i 76 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQDSDNW-VVDE-LPTTD--LFNQLRDTYPKGFWNELM------DRVFKEL---HEQGVRIAEI 76 (256)
T ss_pred cCCcEEEEEecCceeecCCcchH-HHHh-cccch--hHHHHHHhcccchHHHHH------HHHHHHH---HHcCCCHHHH
Confidence 34677999999999999887532 2221 11111 1111111222 11111 1112211 1468899998
Q ss_pred HHHHHHHhhhHHHhhccHHHHH---HHHhCC--CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeee
Q 010860 94 ELASRAVLPRFYAADVRKESYE---VFDKCE--RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGF 164 (499)
Q Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~G--~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~ 164 (499)
.+..+.. -+.|.+++ ..++.| .++|||-+..++++.|.+. +|+ ..|..+.-.+++ +|+++=+
T Consensus 77 k~~~r~i-------P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da-~G~L~v~ 147 (256)
T KOG3120|consen 77 KQVLRSI-------PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDA-SGRLLVR 147 (256)
T ss_pred HHHHhcC-------CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCC-CCcEEee
Confidence 7655532 13344444 456778 8999999999999999999 886 455555655553 7876533
Q ss_pred Eec---------CCcccchhHH-HHHH-HHh--CCCC-CeEEEeCCcCcH-HHHhccccCee
Q 010860 165 VKR---------PGVLVGKWKK-LAVL-KEF--GEDA-PDLGIGDRQTDH-DFMSICKEGYM 211 (499)
Q Consensus 165 ~~~---------~~~~~g~~K~-~~l~-~~~--~~~~-~~~aygDS~~D~-pmL~~a~~~~~ 211 (499)
-.. +|.|. ++| ..+. +.+ |..+ ..++.||+.||+ |++.+.+.=|+
T Consensus 148 pyH~~hsC~~CPsNmCK--g~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~a 207 (256)
T KOG3120|consen 148 PYHTQHSCNLCPSNMCK--GLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVA 207 (256)
T ss_pred cCCCCCccCcCchhhhh--hHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCcee
Confidence 221 12222 222 1121 112 2233 234569999997 67666555443
No 65
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.55 E-value=1.3e-06 Score=84.38 Aligned_cols=92 Identities=12% Similarity=0.081 Sum_probs=58.4
Q ss_pred ccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++|.+ ++.++++| .+.|+|++....++.+.+. +|+++.+. ..+.. +.. +. +++. .+-...+.+.+
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~--~i~~~-~~~--~~--~KP~---p~~~~~~~~~l 164 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRCA--VLIGG-DTL--AE--RKPH---PLPLLVAAERI 164 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhccc--EEEec-CcC--CC--CCCC---HHHHHHHHHHh
Confidence 45544 45788999 9999999999998888888 88754321 11110 100 10 1111 22334444555
Q ss_pred CC-CCCeEEEeCCcCcHHHHhccccCee
Q 010860 185 GE-DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 185 ~~-~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
|. ...++.+|||.+|+.+-+.+|-..+
T Consensus 165 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 165 GVAPTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred CCChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 63 2357899999999999999997754
No 66
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.50 E-value=2.2e-06 Score=81.96 Aligned_cols=109 Identities=15% Similarity=0.058 Sum_probs=68.7
Q ss_pred CCCHHHHHHHHHHHhhhHHH------hhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--E----EEeC
Q 010860 87 GLKIRDIELASRAVLPRFYA------ADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--K----VLGT 150 (499)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~------~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~----vigt 150 (499)
|.+.++++++.+.|...+.. ..++|.+. +.++++| ++.|+|++....++.+.+. +|++ . ++++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 60 GADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDVDAVVCP 138 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccCCEEEcC
Confidence 66666666665555443321 13555444 4788899 9999999999999999998 7764 3 2332
Q ss_pred eEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCC--CCeEEEeCCcCcHHHHhccccCe
Q 010860 151 EIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED--APDLGIGDRQTDHDFMSICKEGY 210 (499)
Q Consensus 151 ~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~--~~~~aygDS~~D~pmL~~a~~~~ 210 (499)
. ....++ + .++-...+.+.+|.. ..++..|||.+|+..-+.+|-++
T Consensus 139 ~-------~~~~~K----P---~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 139 S-------DVAAGR----P---APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred C-------cCCCCC----C---CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 2 110111 1 112223333344532 35788999999999999999987
No 67
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.46 E-value=5e-06 Score=81.43 Aligned_cols=109 Identities=17% Similarity=0.062 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHhhhH---HHh--hccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-----EEEeCeEE
Q 010860 88 LKIRDIELASRAVLPRF---YAA--DVRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-----KVLGTEIE 153 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~---~~~--~i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-----~vigt~l~ 153 (499)
.+.++++++.+.|...+ +.+ .++|.+ ++.++++| ++.|+|+++...++.+.+. +|++ .++|++-
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~- 151 (253)
T TIGR01422 74 PTEADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDD- 151 (253)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEcccc-
Confidence 34556666555554322 111 244544 44678899 9999999999999999887 7653 3333321
Q ss_pred EecCCCceeeeEecCCcccchhHHHHHHHHhCC--CCCeEEEeCCcCcHHHHhccccCee
Q 010860 154 VNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE--DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 154 ~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~--~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+. .++ +. ++=.....+.+|. ...++.+|||.+|+..-+.+|-..+
T Consensus 152 ~~------~~K----P~---p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i 198 (253)
T TIGR01422 152 VP------AGR----PA---PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTV 198 (253)
T ss_pred CC------CCC----CC---HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEE
Confidence 00 011 11 1111222233453 2357889999999999999995543
No 68
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.45 E-value=2.1e-06 Score=81.83 Aligned_cols=92 Identities=18% Similarity=0.102 Sum_probs=58.0
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
.+|.+. ++++++| ++.|+|++....++.+.+. +|++..+-.-+..+ .. +. +.+ ..+-..++.+.+
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~---~~--~~--~Kp---~p~~~~~~~~~~ 151 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLD---DV--EH--AKP---DPEPVLKALELL 151 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecC---cC--CC--CCC---CcHHHHHHHHHc
Confidence 345444 4688899 9999999999999999998 89754332111111 00 00 001 112223444445
Q ss_pred CCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 185 GED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 185 ~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+.. ..++.+|||.+|+..-+.+|-..+
T Consensus 152 ~~~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 152 GAKPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred CCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 532 247789999999999999997654
No 69
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.44 E-value=2.8e-06 Score=78.69 Aligned_cols=107 Identities=12% Similarity=0.029 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHH---hhhHHH---hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeE
Q 010860 87 GLKIRDIELASRAV---LPRFYA---ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEI 152 (499)
Q Consensus 87 G~~~~~l~~~~~~~---~~~~~~---~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l 152 (499)
+.+.++++++.+.+ +.+.+. ..++|.+.+ .++++| .++++|++ ..++.+.+. +|+ |.++++.-
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~ 137 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADE 137 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhh
Confidence 57777777666533 222221 235565554 678899 99999998 557888887 886 44444321
Q ss_pred EEecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCe
Q 010860 153 EVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGY 210 (499)
Q Consensus 153 ~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~ 210 (499)
. +. ..+. ++-..++.+.++.. ..++..|||..|+..-+.+|-..
T Consensus 138 ~-----~~------~kp~---~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 138 V-----KE------GKPH---PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred C-----CC------CCCC---hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 0 10 0111 12223344444532 24678999999999988887654
No 70
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.42 E-value=5e-06 Score=75.01 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=66.5
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEec----CCCceeeeEecCCcccchhHHHHHHHHhC
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNP----RTKRATGFVKRPGVLVGKWKKLAVLKEFG 185 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~----~~g~~tG~~~~~~~~~g~~K~~~l~~~~~ 185 (499)
.+-++|.++++ .++||||+.++++.|+.+.++|-+.+-+.++..++ +||--.=.....+ .+|--|-.-++++..
T Consensus 79 Kef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds-~fG~dK~~vI~~l~e 157 (220)
T COG4359 79 KEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDS-QFGHDKSSVIHELSE 157 (220)
T ss_pred HHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCcc-ccCCCcchhHHHhhc
Confidence 45667999999 99999999999999999996776665555544321 1332111111112 268889888888754
Q ss_pred CCCCeEEE-eCCcCcHHHHhccccCee
Q 010860 186 EDAPDLGI-GDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 186 ~~~~~~ay-gDS~~D~pmL~~a~~~~~ 211 (499)
. ..++.| |||.+|+.--..++.-++
T Consensus 158 ~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 158 P-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred C-CceEEEecCCcccccHhhhhhhHhh
Confidence 3 345554 999999987666665444
No 71
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.41 E-value=7.2e-06 Score=78.31 Aligned_cols=91 Identities=18% Similarity=0.086 Sum_probs=57.2
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE----EEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK----VLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~----vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
++|.+. +.++++| +++|+|.+....++...+. +|++. +++++- +|. ..+ ..+-...+
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~---------~~~--~KP---~~~~~~~~ 159 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEE---------EGV--EKP---HPKIFYAA 159 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEecc---------CCC--CCC---CHHHHHHH
Confidence 455544 4788899 9999999998888888888 88743 333221 010 001 11222333
Q ss_pred HHHhCCC-CCeEEEeCCc-CcHHHHhccccC-eecCC
Q 010860 181 LKEFGED-APDLGIGDRQ-TDHDFMSICKEG-YMVLP 214 (499)
Q Consensus 181 ~~~~~~~-~~~~aygDS~-~D~pmL~~a~~~-~~Vnp 214 (499)
.+.+|.. ..++.+|||. +|+..-+.+|-. +.|+.
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 4445532 3578999998 899999999854 44443
No 72
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.37 E-value=4.4e-06 Score=78.50 Aligned_cols=88 Identities=16% Similarity=0.081 Sum_probs=56.5
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE 186 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~ 186 (499)
++++.++++| +++|+|.++...++.+.+. +|+ |.+++++- + |.. ++. .+--..+.+.+|.
T Consensus 99 ~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~-~--------~~~--KP~---~~~~~~~~~~~~~ 163 (198)
T TIGR01428 99 AGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADA-V--------RAY--KPA---PQVYQLALEALGV 163 (198)
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhh-c--------CCC--CCC---HHHHHHHHHHhCC
Confidence 3445788899 9999999999999999998 886 44444431 0 100 011 1112333344553
Q ss_pred -CCCeEEEeCCcCcHHHHhccccC-eecCC
Q 010860 187 -DAPDLGIGDRQTDHDFMSICKEG-YMVLP 214 (499)
Q Consensus 187 -~~~~~aygDS~~D~pmL~~a~~~-~~Vnp 214 (499)
...++.+|||.+|+.--+.+|-. +.|++
T Consensus 164 ~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 164 PPDEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 23578899999999998888855 44444
No 73
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=98.36 E-value=1.6e-06 Score=87.86 Aligned_cols=77 Identities=23% Similarity=0.213 Sum_probs=51.7
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccce-eeecccc----cccccccC----CeeEeecCCHHH---HHHHHHHhhCC-
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSC-VTYSVSK----LSRFLSPI----PAIALTRDRAAD---AARISELLQKG- 366 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~-v~~~v~k----~~~~~~~~----~~i~i~R~~~~~---~~~~~~~l~~G- 366 (499)
+.++|++|||+|..|-+++.....+.-.. -.+.+.| .-.+++|. |.||++|+.+.+ +.+..+.+++-
T Consensus 70 ~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~~ 149 (346)
T KOG1505|consen 70 KERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDSP 149 (346)
T ss_pred CCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccCC
Confidence 46899999999999999999777554211 1223333 12234554 899999976544 34455555553
Q ss_pred -C--EEEecCCee
Q 010860 367 -D--LVVCPEGTT 376 (499)
Q Consensus 367 -~--l~IFPEGTr 376 (499)
+ +++||||||
T Consensus 150 ~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 150 DPYWLLLFPEGTR 162 (346)
T ss_pred CceEEEEecCCCc
Confidence 3 999999994
No 74
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.29 E-value=2.3e-06 Score=82.71 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=65.2
Q ss_pred HHHHHHHHhCC-CEEEEeCC----cHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhC
Q 010860 111 KESYEVFDKCE-RKVVVTAN----PTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFG 185 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas----~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~ 185 (499)
.+++++|+++| ++++||+. .+..++.+.+. +|+++.+. +. ++|...+. ...+|..++++ .+
T Consensus 120 ~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~--~i-------~~~d~~~~---~Kp~~~~~l~~-~~ 185 (237)
T TIGR01672 120 RQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNP--VI-------FAGDKPGQ---YQYTKTQWIQD-KN 185 (237)
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchhee--EE-------ECCCCCCC---CCCCHHHHHHh-CC
Confidence 56677899999 99999998 88899999998 99975331 11 12222111 11234433332 22
Q ss_pred CCCCeEEEeCCcCcHHHHhccccCee---cCCCCCCCCCCcc-cCCcee
Q 010860 186 EDAPDLGIGDRQTDHDFMSICKEGYM---VLPSKSAKPLPRD-RLKSRI 230 (499)
Q Consensus 186 ~~~~~~aygDS~~D~pmL~~a~~~~~---Vnp~~~~~~~~~~-~~~~~~ 230 (499)
.++.||||.+|+.--+.+|...+ ......-.++|.. .++..+
T Consensus 186 ---i~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s~~~~~~~~g~~~e~~ 231 (237)
T TIGR01672 186 ---IRIHYGDSDNDITAAKEAGARGIRILRASNSTYKPLPQAGGYGEEV 231 (237)
T ss_pred ---CeEEEeCCHHHHHHHHHCCCCEEEEEecCCCCCCCcccccCCCcee
Confidence 47899999999988878876632 2334444566664 444443
No 75
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.27 E-value=2.2e-05 Score=77.58 Aligned_cols=108 Identities=18% Similarity=0.083 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHhhhH---HHh--hccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC-----cEEEeCeEEE
Q 010860 89 KIRDIELASRAVLPRF---YAA--DVRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG-----DKVLGTEIEV 154 (499)
Q Consensus 89 ~~~~l~~~~~~~~~~~---~~~--~i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~-----d~vigt~l~~ 154 (499)
+.++++++.+.|...+ +.. ..+|.+ ++.++++| ++.|+|+++...++.+.+. +|+ |.+++++- +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~-~ 154 (267)
T PRK13478 77 TEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDD-V 154 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCc-C
Confidence 4455655555544322 111 245544 44788899 9999999999998888876 553 33333321 0
Q ss_pred ecCCCceeeeEecCCcccchhHHHHHHHHhCC-C-CCeEEEeCCcCcHHHHhccccCee
Q 010860 155 NPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE-D-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 155 ~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~-~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+ .++ +. .+=...+.+.+|. . ..++.+|||.+|+..-+.+|-.++
T Consensus 155 ----~--~~K----P~---p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i 200 (267)
T PRK13478 155 ----P--AGR----PY---PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTV 200 (267)
T ss_pred ----C--CCC----CC---hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEE
Confidence 0 000 11 1111223333453 2 357899999999999999986544
No 76
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.27 E-value=3.3e-06 Score=90.05 Aligned_cols=91 Identities=11% Similarity=0.046 Sum_probs=56.4
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++|.+. ++++++| ++.|+|++....++.+.+. +|++..+..-+..+ +. .++ +.+..+ ...++ .+
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d--~v--~~~--~kP~~~----~~al~-~l 398 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIE--QI--NSL--NKSDLV----KSILN-KY 398 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecC--CC--CCC--CCcHHH----HHHHH-hc
Confidence 455544 4788899 9999999999999999998 88754332211111 10 000 101101 11122 23
Q ss_pred CCCCCeEEEeCCcCcHHHHhccccCeec
Q 010860 185 GEDAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 185 ~~~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
+. ..++.+|||.+|+..-+.+|-.++-
T Consensus 399 ~~-~~~v~VGDs~~Di~aAk~AG~~~I~ 425 (459)
T PRK06698 399 DI-KEAAVVGDRLSDINAAKDNGLIAIG 425 (459)
T ss_pred Cc-ceEEEEeCCHHHHHHHHHCCCeEEE
Confidence 32 3588999999999999999975443
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.25 E-value=1.3e-05 Score=76.96 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=57.2
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCC-C
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDA-P 189 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~-~ 189 (499)
+++++++++| +..|+|+-++..++.+++. +|++..+......+ +... .++ ...-+..+.+.+|.+. .
T Consensus 96 e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~---~~~~----~KP---~P~~l~~~~~~~~~~~~~ 164 (220)
T COG0546 96 ELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGD---DVPP----PKP---DPEPLLLLLEKLGLDPEE 164 (220)
T ss_pred HHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCC---CCCC----CCc---CHHHHHHHHHHhCCChhh
Confidence 4445789999 9999999999999999999 89754332221111 0000 001 1233344445556432 4
Q ss_pred eEEEeCCcCcHHHHhccccC
Q 010860 190 DLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 190 ~~aygDS~~D~pmL~~a~~~ 209 (499)
.+..|||.+|+.+=+.|+-+
T Consensus 165 ~l~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 165 ALMVGDSLNDILAAKAAGVP 184 (220)
T ss_pred eEEECCCHHHHHHHHHcCCC
Confidence 67889999999999999955
No 78
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.24 E-value=1.5e-05 Score=79.11 Aligned_cols=89 Identities=11% Similarity=0.054 Sum_probs=56.2
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++|.+. +.++++| ++.|+|++.+..++.+.+. +|+++.+-. + + ++.... . . ..-...+.+.+
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~~-v-i-------~~~~~~--~-k-~~~~~~~l~~~ 208 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFSV-V-Q-------AGTPIL--S-K-RRALSQLVARE 208 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheEE-E-E-------ecCCCC--C-C-HHHHHHHHHHh
Confidence 355554 4688899 9999999999999999998 897543321 1 1 111000 0 1 11112222333
Q ss_pred CC-CCCeEEEeCCcCcHHHHhccccCee
Q 010860 185 GE-DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 185 ~~-~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+. ...++.+|||.+|+..-..+|-..+
T Consensus 209 ~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 209 GWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred CcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 42 2357889999999999999987654
No 79
>PRK11587 putative phosphatase; Provisional
Probab=98.22 E-value=2.1e-05 Score=75.16 Aligned_cols=91 Identities=12% Similarity=-0.097 Sum_probs=54.0
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc---EEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD---KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d---~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
++|.+. +.++++| ++.|+|.+....++...+. +|+. .+++.+- + +. ..+. +.=.....
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~~~~~i~~~~~-~--------~~--~KP~---p~~~~~~~ 148 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLPAPEVFVTAER-V--------KR--GKPE---PDAYLLGA 148 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCCCccEEEEHHH-h--------cC--CCCC---cHHHHHHH
Confidence 455554 4788999 9999999987777666666 6652 3332220 0 00 0011 11112223
Q ss_pred HHhCC-CCCeEEEeCCcCcHHHHhcccc-CeecCC
Q 010860 182 KEFGE-DAPDLGIGDRQTDHDFMSICKE-GYMVLP 214 (499)
Q Consensus 182 ~~~~~-~~~~~aygDS~~D~pmL~~a~~-~~~Vnp 214 (499)
+.+|. ...++.+|||..|+..-+.+|- .+.|+.
T Consensus 149 ~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 149 QLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred HHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 33453 2357889999999999998885 456653
No 80
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.22 E-value=1.6e-05 Score=77.75 Aligned_cols=84 Identities=12% Similarity=-0.011 Sum_probs=56.2
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc----EEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC-
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD----KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE- 186 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d----~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~- 186 (499)
++++++++| ++.|+|++....++.+.+. +|++ .+++++-. . . + .+. ++-...+.+.++.
T Consensus 116 ~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~-~--~----~----KP~---p~~~~~a~~~~~~~ 180 (248)
T PLN02770 116 LKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSEC-E--H----A----KPH---PDPYLKALEVLKVS 180 (248)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcC-C--C----C----CCC---hHHHHHHHHHhCCC
Confidence 444788999 9999999999999999998 8864 44444311 0 0 1 111 1122333344453
Q ss_pred CCCeEEEeCCcCcHHHHhccccCee
Q 010860 187 DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 187 ~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
...++.+|||..|+..-+.+|-.++
T Consensus 181 ~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 181 KDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 2357889999999999999987755
No 81
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.21 E-value=5e-06 Score=78.64 Aligned_cols=92 Identities=11% Similarity=-0.011 Sum_probs=56.6
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++|.+. ++++++| +++|+|++....++...+. +|++..+-.-+..+ + . +. ..+. .+-...+.+.+
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~--~-~--~~--~KP~---~~~~~~~~~~~ 144 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSD--E-V--PR--PKPA---PDIVREALRLL 144 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecC--c-C--CC--CCCC---hHHHHHHHHHc
Confidence 445544 4678899 9999999999999998888 88743322111111 0 0 00 0010 11122333334
Q ss_pred CC-CCCeEEEeCCcCcHHHHhccccCee
Q 010860 185 GE-DAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 185 ~~-~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
+. ...++.+|||.+|+..-+.+|-+++
T Consensus 145 ~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 145 DVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred CCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 53 2347889999999999999998754
No 82
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.21 E-value=2.5e-05 Score=73.42 Aligned_cols=81 Identities=16% Similarity=0.118 Sum_probs=50.8
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC-CC
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE-DA 188 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~-~~ 188 (499)
.++++.++++| ++.|+|+++...++.+.+. +|+++.+..-+..+ .... + +. -+ -...+.+.+|. ..
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~---~~~~-K----P~--p~-~~~~~~~~~~~~~~ 179 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWME---DCPP-K----PN--PE-PLILAAKALGVEAC 179 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeec---CCCC-C----cC--HH-HHHHHHHHhCcCcc
Confidence 56777788899 9999999999999999999 99765442211111 1100 1 11 11 11222333453 23
Q ss_pred CeEEEeCCcCcHHHH
Q 010860 189 PDLGIGDRQTDHDFM 203 (499)
Q Consensus 189 ~~~aygDS~~D~pmL 203 (499)
.++.+|||.+|+..-
T Consensus 180 ~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 180 HAAMVGDTVDDIITG 194 (197)
T ss_pred cEEEEeCCHHHHHHH
Confidence 578899999998654
No 83
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.21 E-value=3e-05 Score=72.05 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=49.6
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCC-C
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-A 188 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~ 188 (499)
+.++ ++ ++.|+|+++...++.+.+. +|+ |.+++++- + +. + .+. ++=..++.+.++.. .
T Consensus 97 ~~L~-~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~-~----~~--~----KP~---p~~~~~~~~~~~~~~~ 160 (188)
T PRK10725 97 KAWH-GRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADD-V----QH--H----KPA---PDTFLRCAQLMGVQPT 160 (188)
T ss_pred HHHH-hCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhh-c----cC--C----CCC---hHHHHHHHHHcCCCHH
Confidence 3444 45 8999999999999999998 886 44444321 0 00 0 011 11122333334532 2
Q ss_pred CeEEEeCCcCcHHHHhccccCee
Q 010860 189 PDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 189 ~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
.++.+|||..|+.--..+|-.++
T Consensus 161 ~~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 161 QCVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred HeEEEeccHhhHHHHHHCCCEEE
Confidence 47888999999998888876543
No 84
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.20 E-value=4e-05 Score=73.13 Aligned_cols=92 Identities=16% Similarity=0.011 Sum_probs=57.9
Q ss_pred hccHHHHH---HHHhCCCEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 108 DVRKESYE---VFDKCERKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 108 ~i~~~~~~---~~~~~G~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
.++|++.+ .++++.+++|+|++....++++.+. +|+ |.++++.-. |. . . +. .+-...+
T Consensus 97 ~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-----~~----~-K-P~---~~~~~~~ 161 (224)
T TIGR02254 97 QLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDA-----GI----Q-K-PD---KEIFNYA 161 (224)
T ss_pred eeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCcc-----CC----C-C-CC---HHHHHHH
Confidence 35676665 4555458899999999999999998 886 445444311 11 0 0 11 1122333
Q ss_pred HHHh-CC-CCCeEEEeCCc-CcHHHHhccccCe-ecCC
Q 010860 181 LKEF-GE-DAPDLGIGDRQ-TDHDFMSICKEGY-MVLP 214 (499)
Q Consensus 181 ~~~~-~~-~~~~~aygDS~-~D~pmL~~a~~~~-~Vnp 214 (499)
.+.+ |. ...++.+|||. +|+..-+.+|-.. .++.
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 3344 52 23578999998 7999999999754 4443
No 85
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.18 E-value=5.7e-06 Score=78.23 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=57.3
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhH--HHHHHH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWK--KLAVLK 182 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K--~~~l~~ 182 (499)
++|++. +.++++| +++|+||.....++.++++ +|++. ..+ .+...+ .-+.| .+.+++
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~~-----~~v-------~a~~~~----kP~~k~~~~~i~~ 190 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIFD-----SIV-------FARVIG----KPEPKIFLRIIKE 190 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSCS-----EEE-------EESHET----TTHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhccCcceeeeeccccccccccccc-ccccc-----ccc-------cccccc----cccchhHHHHHHH
Confidence 455544 5788999 9999999999999999999 99942 011 111102 22457 666666
Q ss_pred HhC-CCCCeEEEeCCcCcHHHHhccc
Q 010860 183 EFG-EDAPDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 183 ~~~-~~~~~~aygDS~~D~pmL~~a~ 207 (499)
++ ....+.+.||+.||.+||+.||
T Consensus 191 -l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 191 -LQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -HTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -HhcCCCEEEEEccCHHHHHHHHhCc
Confidence 44 2335778899999999999875
No 86
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.16 E-value=2.2e-05 Score=72.65 Aligned_cols=107 Identities=16% Similarity=0.117 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHh---hhHHH----hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc----EEEeCeE
Q 010860 88 LKIRDIELASRAVL---PRFYA----ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD----KVLGTEI 152 (499)
Q Consensus 88 ~~~~~l~~~~~~~~---~~~~~----~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d----~vigt~l 152 (499)
.+.++++++.+++. .+.+. ...+|.+.+ .++++| ++.|+|++.. .+.+.+. +|++ .++++.-
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~ 136 (185)
T TIGR01990 60 YSEEEKEELAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAE 136 (185)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhh
Confidence 45566655555432 22211 134565544 688899 9999998753 3556677 7853 4333221
Q ss_pred EEecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 153 EVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 153 ~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
.+. + . +. .+-...+.+.++.. ..++.+|||.+|+..-+.+|-..+
T Consensus 137 -----~~~--~---k-p~---p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 137 -----IKK--G---K-PD---PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred -----cCC--C---C-CC---hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence 010 0 0 11 11112223334422 247889999999998888876543
No 87
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.15 E-value=1.8e-05 Score=72.95 Aligned_cols=85 Identities=16% Similarity=0.058 Sum_probs=53.0
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
++|.+.+ .++++| +++|+|+++... +.+.++ +|+ |.+++++-. +. +.+ ..+-...+
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~-----~~------~KP---~~~~~~~~ 149 (183)
T TIGR01509 86 PLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDV-----GR------GKP---DPDIYLLA 149 (183)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCC-----CC------CCC---CHHHHHHH
Confidence 4565554 678889 999999999887 766666 775 444443210 00 001 12223444
Q ss_pred HHHhCC-CCCeEEEeCCcCcHHHHhccccC
Q 010860 181 LKEFGE-DAPDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 181 ~~~~~~-~~~~~aygDS~~D~pmL~~a~~~ 209 (499)
.+.+|. ...++.+|||..|+..-+.+|-.
T Consensus 150 ~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 150 LKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 455553 23578899999999887777653
No 88
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.13 E-value=3e-05 Score=79.80 Aligned_cols=89 Identities=12% Similarity=0.089 Sum_probs=57.7
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
++|.+.+ .++++| ++.|+|+++...++.+.+. +|+ |.+++++-. . .+ .+. ++=....
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv-~------~~----KP~---Peifl~A 281 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDV-Y------RG----KPD---PEMFIYA 281 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcC-C------CC----CCC---HHHHHHH
Confidence 4555444 688899 9999999999999999998 886 445543311 0 01 011 1111223
Q ss_pred HHHhCC-CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 181 LKEFGE-DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 181 ~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
.+.+|. ...++.+|||.+|+..-+.+|-.++-
T Consensus 282 ~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~Ig 314 (381)
T PLN02575 282 AQLLNFIPERCIVFGNSNQTVEAAHDARMKCVA 314 (381)
T ss_pred HHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEE
Confidence 333452 23588999999999999988865443
No 89
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.13 E-value=2.2e-05 Score=77.33 Aligned_cols=88 Identities=16% Similarity=0.101 Sum_probs=56.6
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc----EEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD----KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d----~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
++|.+. +.++++| ++.|+|++....++.+.+. +|++ .+++++-. . . ++ +. .+=...+
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~-~--~----~K----P~---Pe~~~~a 174 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDV-Y--R----GK----PD---PEMFMYA 174 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccC-C--C----CC----CC---HHHHHHH
Confidence 345444 4688899 9999999999999999998 8864 44443210 0 0 11 11 1111223
Q ss_pred HHHhCCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 181 LKEFGED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 181 ~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
.+.+|.. ..++.+|||.+|+..-+.+|-.++
T Consensus 175 ~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 175 AERLGFIPERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred HHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 3334532 347889999999999999997653
No 90
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.08 E-value=9.4e-05 Score=69.68 Aligned_cols=104 Identities=15% Similarity=0.051 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhhHHH---hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCC
Q 010860 90 IRDIELASRAVLPRFYA---ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRT 158 (499)
Q Consensus 90 ~~~l~~~~~~~~~~~~~---~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~ 158 (499)
.+++.+..++++..+.. -.++|.+.+ .++++| +++|+|.+...+ +...+. +|+ |.++++.-
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~-~~l~~~fd~i~~s~~------ 155 (203)
T TIGR02252 84 PESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA-LGLLEYFDFVVTSYE------ 155 (203)
T ss_pred chhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH-CCcHHhcceEEeecc------
Confidence 45566666665543311 124555554 678889 999999887754 667777 786 34443321
Q ss_pred CceeeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCc-CcHHHHhccccC
Q 010860 159 KRATGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQ-TDHDFMSICKEG 209 (499)
Q Consensus 159 g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~-~D~pmL~~a~~~ 209 (499)
+|. ..+. .+=...+.+.+|.. ..++.+|||. +|+..-+.+|-.
T Consensus 156 ---~~~--~KP~---~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 ---VGA--EKPD---PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred ---cCC--CCCC---HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 010 0011 11123333444532 3578899997 899887777643
No 91
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.05 E-value=1.2e-05 Score=88.66 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=72.2
Q ss_pred HhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 106 AADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 106 ~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
.+.+||++.+ .+|+.| +++++||.....++.+|++ +|+|++++ . +.-++|.+.++
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~a-------------------~-~~PedK~~~v~ 502 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFIA-------------------E-ATPEDKIALIR 502 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEEc-------------------C-CCHHHHHHHHH
Confidence 3456776655 789999 9999999999999999999 99987654 1 24478999999
Q ss_pred HHhCCCCCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 182 KEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 182 ~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
++.........+||+.||.|+|+.|+.++++++.
T Consensus 503 ~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~g 536 (675)
T TIGR01497 503 QEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSG 536 (675)
T ss_pred HHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCC
Confidence 8754333456789999999999999999999964
No 92
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.99 E-value=6.5e-05 Score=71.81 Aligned_cols=113 Identities=9% Similarity=0.063 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHhhhHHH--hhccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeE
Q 010860 89 KIRDIELASRAVLPRFYA--ADVRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFV 165 (499)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~--~~i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~ 165 (499)
+.+++...-++.+.+.+. ...+|.+.+.++.-+ ++.|+|++....++...+. +|++..+-..+ +++.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v--------~~~~~ 137 (221)
T PRK10563 67 AKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKL--------FSGYD 137 (221)
T ss_pred CHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceE--------eeHHh
Confidence 345555443333322222 235677777777778 9999999999889988888 88743221111 11110
Q ss_pred ecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 166 KRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 166 ~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
.+..- -..+=...+.+.++.. ..++.+|||.+|+.--+.+|-+++
T Consensus 138 ~~~~K-P~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 138 IQRWK-PDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred cCCCC-CChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 00000 0112223333344532 247889999999999888887764
No 93
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.96 E-value=0.0002 Score=68.90 Aligned_cols=84 Identities=18% Similarity=0.099 Sum_probs=55.4
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE 186 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~ 186 (499)
+.++.++++| ++.|+|.+....++...+. +|+ |.+++++- +. .+ ++. .+-...+.+.+|.
T Consensus 100 e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~-~~--~~--------KP~---p~~~~~~~~~~~~ 164 (224)
T PRK14988 100 PFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHT-FG--YP--------KED---QRLWQAVAEHTGL 164 (224)
T ss_pred HHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeee-CC--CC--------CCC---HHHHHHHHHHcCC
Confidence 3344788999 9999999988888888787 785 55555541 11 01 111 1222334444553
Q ss_pred -CCCeEEEeCCcCcHHHHhccccCe
Q 010860 187 -DAPDLGIGDRQTDHDFMSICKEGY 210 (499)
Q Consensus 187 -~~~~~aygDS~~D~pmL~~a~~~~ 210 (499)
...++++|||.+|+.--+.+|-.+
T Consensus 165 ~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 165 KAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred ChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 235889999999999888888864
No 94
>PLN02940 riboflavin kinase
Probab=97.92 E-value=0.00014 Score=75.55 Aligned_cols=87 Identities=10% Similarity=0.011 Sum_probs=54.3
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC-
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE- 186 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~- 186 (499)
.++.++++| ++.|+|+++...++...++++|+ |.+++++-. . .++ +. .+=...+.+.+|.
T Consensus 101 lL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v-~--~~K--------P~---p~~~~~a~~~lgv~ 166 (382)
T PLN02940 101 LIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV-E--KGK--------PS---PDIFLEAAKRLNVE 166 (382)
T ss_pred HHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc-C--CCC--------CC---HHHHHHHHHHcCCC
Confidence 445788899 99999999998888776622665 555554311 0 000 11 1112223333452
Q ss_pred CCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 187 DAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 187 ~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
...++..|||.+|+..-+.+|-.++.-
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 235789999999999999999664443
No 95
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=97.92 E-value=2.1e-05 Score=84.06 Aligned_cols=171 Identities=18% Similarity=0.172 Sum_probs=103.5
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeeccc-c-------cccccccCCeeEeecCCH--HH-----HHHHHHHhh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVS-K-------LSRFLSPIPAIALTRDRA--AD-----AARISELLQ 364 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~-k-------~~~~~~~~~~i~i~R~~~--~~-----~~~~~~~l~ 364 (499)
+-+.++|.-|.|++|.+++..++-+. .-+...++ . +..++...|.+||.|+-+ .. .+-+.+..+
T Consensus 295 gheiVyvpcHRShiDylLLsy~ly~n-gLvPpHiaAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~ 373 (810)
T COG2937 295 GHEIVYVPCHRSHIDYLLLSYVLYHN-GLVPPHIAAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFS 373 (810)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhc-CCCcchhhccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHh
Confidence 45799999999999999999987332 11111111 1 012233448999999432 11 234566777
Q ss_pred CC-CEEEecCCeecCCCcccccchhhhh-------c----CCcEEEEEEeeccCCccccc----cCCc-cccccccccc-
Q 010860 365 KG-DLVVCPEGTTCRENFLLRFSALFAE-------M----SDRIVPVAVNCKQNMFYGTT----VRGV-KFWDPYFFFM- 426 (499)
Q Consensus 365 ~G-~l~IFPEGTrt~~~~l~~Fk~~~~~-------~----~~pVvPV~I~~~~~~~~~~~----~~~~-~~~~~~~~~~- 426 (499)
+| ++--|-||+||+.+.|++-|.|... - .+-+|||.|.|..- ..+.+ .+|. |--+.+|+++
T Consensus 374 rgysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v-~Ev~tYa~ElrGa~K~kE~~~~l~r 452 (810)
T COG2937 374 RGYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHV-HEVGTYAKELRGATKEKESLRWLLR 452 (810)
T ss_pred CCcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhH-hhHHHHHHHhcCCcCCcccHHHHHH
Confidence 88 6999999999999999999943221 1 24678999998742 12111 1222 2222222211
Q ss_pred -------CCCCeEEEEEccccCCcccccC------CC-----------CCHHHHHHHHHHHHHHhhCCcc
Q 010860 427 -------NPRPTYEVTFLDRLPEEMTCKA------GG-----------KSAIEVANYVQKVLGDVLGFEC 472 (499)
Q Consensus 427 -------~~~~~v~v~~l~pi~~~~~~~~------~~-----------~~~~~la~~v~~~i~~~l~~~~ 472 (499)
+..+++-|.|+|||+..++.+. +. .+...++.+|.-.|.++-.+..
T Consensus 453 ~i~aqk~Rn~Gq~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna 522 (810)
T COG2937 453 VIKAQKLRNLGQGYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNA 522 (810)
T ss_pred HHHHHhhhhcCcEEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCH
Confidence 2245889999999987665310 00 1234577777777776654443
No 96
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=97.92 E-value=7.9e-05 Score=74.88 Aligned_cols=157 Identities=11% Similarity=0.166 Sum_probs=90.7
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.|+++.. ..++++|++++|.+.+|........ ..++..+..-... +.+ + ...|.-.+. ....
T Consensus 96 ~v~i~g~e~l~~a~~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~~n-~~~~~~~~~~R~~~g~~~i~--~~~~ 172 (298)
T PRK08419 96 KVTFINEENLLDALKKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLLKS-APINEMISKRREQFGIELID--KKGA 172 (298)
T ss_pred cEEEECHHHHHHHHHcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCCCC-hHHHHHHHHHHHHcCCeeEE--CccH
Confidence 5788999876421 1368999999999999998754333 2243332222111 222 1 112333332 2346
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccc-------hh----hhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFS-------AL----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk-------~~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+..+.+.|++|. ++++|....+ .++...+|= .+ +...++||+||.+....
T Consensus 173 ~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~----------------- 235 (298)
T PRK08419 173 MKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD----------------- 235 (298)
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC-----------------
Confidence 777888999997 9999965543 333344543 12 23379999999994321
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
...++|++.||+..+... +..++..+.++++-+.+++..
T Consensus 236 ------~~~~~i~~~~~i~~~~~~-~~~~~~~~~~~~~~~~lE~~I 274 (298)
T PRK08419 236 ------YSHFTITFFPPIRSKITD-DAEADILEATQAQASACEEMI 274 (298)
T ss_pred ------CCeEEEEEcCCccCCCCC-ChHHHHHHHHHHHHHHHHHHH
Confidence 114778888998754210 011344455555555555544
No 97
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=97.86 E-value=6e-05 Score=76.07 Aligned_cols=164 Identities=15% Similarity=0.173 Sum_probs=87.7
Q ss_pred CCeEEEecCCCCChHHHHHHHhCCccceee---ecccccc----cccccC------CeeEeec---CC-----------H
Q 010860 301 PGNLYVCNHRTPLDPIVIAIALGRKVSCVT---YSVSKLS----RFLSPI------PAIALTR---DR-----------A 353 (499)
Q Consensus 301 ~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~---~~v~k~~----~~~~~~------~~i~i~R---~~-----------~ 353 (499)
.++|+++||||-.|+.++..++....+.+. -+|+--. .+..++ -||+-.+ +. .
T Consensus 201 ~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~N~ 280 (426)
T PLN02349 201 HNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKANT 280 (426)
T ss_pred CCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHHHH
Confidence 469999999999999999888743211111 1222100 111222 3555444 11 1
Q ss_pred HHHHHHHHHhhCC-C-EEEecCCeecCCCc------ccccch--------hhhhcCCc--EEEEEEeeccCCccccccCC
Q 010860 354 ADAARISELLQKG-D-LVVCPEGTTCRENF------LLRFSA--------LFAEMSDR--IVPVAVNCKQNMFYGTTVRG 415 (499)
Q Consensus 354 ~~~~~~~~~l~~G-~-l~IFPEGTrt~~~~------l~~Fk~--------~~~~~~~p--VvPV~I~~~~~~~~~~~~~~ 415 (499)
++++.++..|++| . ++|||||||++... .-||-. +...+++| +.|.++....-+.++... .
T Consensus 281 kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~~yDImPPP~~V-E 359 (426)
T PLN02349 281 RTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAMLSYDIMPPPPQV-E 359 (426)
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHHhCccCCCcccc-c
Confidence 2334556678886 5 99999999995332 345662 22335665 889888765422211111 1
Q ss_pred cccccccccccCCCCeEEEEEccccCCcccc---cCCCCCHHHHHHHHHHHHHHhh
Q 010860 416 VKFWDPYFFFMNPRPTYEVTFLDRLPEEMTC---KAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 416 ~~~~~~~~~~~~~~~~v~v~~l~pi~~~~~~---~~~~~~~~~la~~v~~~i~~~l 468 (499)
....+. ... .+.-+-+.++|-|..++.+ .++.+.++++++.+.+...+.+
T Consensus 360 keIGE~--R~v-~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~Y 412 (426)
T PLN02349 360 KEIGER--RLV-GFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQY 412 (426)
T ss_pred cccCce--eee-eeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 111111 111 1223567778877754332 1122445678887777776653
No 98
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.85 E-value=0.00076 Score=67.38 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=55.1
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHH-----HH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKK-----LA 179 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~-----~~ 179 (499)
++|.+.+ .++++| ++.|+|++....++.+.+. ++.+... ..+.+ ++|.- .+..|. ..
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~-~~~~~------v~~~~------~~~~KP~p~~~~~ 210 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERA-QGLDV------FAGDD------VPKKKPDPDIYNL 210 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcccccc-CceEE------Eeccc------cCCCCCCHHHHHH
Confidence 5566555 577899 9999999999988888776 4321111 00000 01110 111121 22
Q ss_pred HHHHhCCC-CCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 180 VLKEFGED-APDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 180 l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
+.+.+|.. ..++.+|||.+|+..-+.+|-.++.-+.
T Consensus 211 a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 247 (286)
T PLN02779 211 AAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKS 247 (286)
T ss_pred HHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEcc
Confidence 23334532 3478899999999999999976655443
No 99
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.84 E-value=0.00036 Score=65.43 Aligned_cols=112 Identities=7% Similarity=-0.062 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHhhhHHHh--hccHHHHH---HHHhCCCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCcee
Q 010860 88 LKIRDIELASRAVLPRFYAA--DVRKESYE---VFDKCERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRAT 162 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~--~i~~~~~~---~~~~~G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~t 162 (499)
.+.++++++.+.|..+.... ..+|.+.+ .+++.+..+++|++.........+. +|++...-.-+ +..++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f-----~~i~~ 125 (197)
T PHA02597 52 CDQELAKKLIEKYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAF-----SEVLM 125 (197)
T ss_pred ccHHHHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcc-----cEEEE
Confidence 45555666656555332222 24565554 5666566667777665544444455 66543221100 01111
Q ss_pred eeEecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhcc--ccCe
Q 010860 163 GFVKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSIC--KEGY 210 (499)
Q Consensus 163 G~~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a--~~~~ 210 (499)
+.... + . ++-...+.+.+| ...++++|||.+|+.--..+ |-.+
T Consensus 126 ~~~~~-~--k-p~~~~~a~~~~~-~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 126 CGHDE-S--K-EKLFIKAKEKYG-DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred eccCc-c--c-HHHHHHHHHHhC-CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 11100 0 1 122233333445 33467899999998877777 6543
No 100
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.83 E-value=0.00054 Score=63.48 Aligned_cols=91 Identities=13% Similarity=0.066 Sum_probs=55.0
Q ss_pred ccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH
Q 010860 109 VRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE 183 (499)
Q Consensus 109 i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~ 183 (499)
.++.+.+.+++-. +++|+|.++...++.+.+. +|+ |.+++++-. +... ....+ .++=...+.+.
T Consensus 85 ~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~-----~~~~--~~~KP---~p~~~~~~~~~ 153 (184)
T TIGR01993 85 PDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTA-----NPDY--LLPKP---SPQAYEKALRE 153 (184)
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecc-----cCcc--CCCCC---CHHHHHHHHHH
Confidence 5677777666655 8999999999999999998 887 444443311 0000 00001 11122333444
Q ss_pred hCCC-CCeEEEeCCcCcHHHHhccccCe
Q 010860 184 FGED-APDLGIGDRQTDHDFMSICKEGY 210 (499)
Q Consensus 184 ~~~~-~~~~aygDS~~D~pmL~~a~~~~ 210 (499)
+|.. ..++.+|||..|+.-=+.+|-..
T Consensus 154 ~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 154 AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 5532 34788999999988777766543
No 101
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.81 E-value=5.6e-05 Score=68.34 Aligned_cols=81 Identities=19% Similarity=0.103 Sum_probs=61.5
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH---hCC-C
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE---FGE-D 187 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~---~~~-~ 187 (499)
++++|+++| ++.|+|+.+...++.++++ +|++..+. +. ..|...++++ ++. .
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~---------~~-------------~~k~~~~~~~~~~~~~~~ 92 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQ---------GQ-------------SNKLIAFSDILEKLALAP 92 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEe---------cc-------------cchHHHHHHHHHHcCCCH
Confidence 466788999 9999999999999999999 99876532 10 1234444433 342 2
Q ss_pred CCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 188 APDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 188 ~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
..++++|||.+|++|++.++.+++|++..
T Consensus 93 ~~~~~vGDs~~D~~~~~~ag~~~~v~~~~ 121 (154)
T TIGR01670 93 ENVAYIGDDLIDWPVMEKVGLSVAVADAH 121 (154)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEecCCcC
Confidence 35788999999999999999999998764
No 102
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.81 E-value=0.00017 Score=65.34 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHhhhHHHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCce
Q 010860 90 IRDIELASRAVLPRFYAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRA 161 (499)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~ 161 (499)
.+++.+...++... -....+|++.+ .++++| +++++|.+....++...++ +|+ |.++++.- .|.
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~-----~~~- 131 (176)
T PF13419_consen 60 PEEIQELFREYNLE-SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDD-----VGS- 131 (176)
T ss_dssp HHHHHHHHHHHHHH-GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGG-----SSS-
T ss_pred HHHHHHHhhhhhhh-hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccch-----hhh-
Confidence 44555555544211 12235555554 677889 9999999999999999998 885 45554431 111
Q ss_pred eeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccC
Q 010860 162 TGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 162 tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~ 209 (499)
..+. ++-...+.+.+|.. ..++.+|||..|+..-..+|-.
T Consensus 132 -----~Kp~---~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 132 -----RKPD---PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp -----STTS---HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred -----hhhH---HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 0011 22234444455532 3578999999999888777643
No 103
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.78 E-value=0.00011 Score=73.88 Aligned_cols=154 Identities=11% Similarity=0.123 Sum_probs=94.9
Q ss_pred EEEE--cCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc-------cccCCeeEee--cC
Q 010860 285 HLVI--RGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF-------LSPIPAIALT--RD 351 (499)
Q Consensus 285 ~v~v--~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~-------~~~~~~i~i~--R~ 351 (499)
++++ +|.|++... ..++++|+++.|.+.+|........ +.++..+..-+.+ +.+ ....|.-.+. ++
T Consensus 89 ~v~i~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~~n-~~~~~~~~~~R~~~g~~~i~~~~~ 167 (298)
T PRK07920 89 RVRVSIEGLEHLDAALAAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERLKP-ESLYERFVAYRESLGFEVLPLTGG 167 (298)
T ss_pred hhhhccCCHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEeccCC-HHHHHHHHHHHHhcCCEEEecCCC
Confidence 4667 888876421 1357999999999999997544333 3343322222222 222 1122433332 22
Q ss_pred CHHHHHHHHHHhhCCC-EEEecCCeecCCCcccccc-------h----hhhhcCCcEEEEEEeeccCCccccccCCcccc
Q 010860 352 RAADAARISELLQKGD-LVVCPEGTTCRENFLLRFS-------A----LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFW 419 (499)
Q Consensus 352 ~~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk-------~----~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~ 419 (499)
....+..+.+.|++|. +++.|..+..+++...+|= . ++...++||+|+.+....
T Consensus 168 ~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~-------------- 233 (298)
T PRK07920 168 ERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEG-------------- 233 (298)
T ss_pred CchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeC--------------
Confidence 2357788899999997 9999999876544444543 1 223379999999985431
Q ss_pred cccccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 420 DPYFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 420 ~~~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
. .++|++.||++.. ..++..+.++++.+.+++..
T Consensus 234 ---------~-~y~v~~~~~~~~~-----~~~~~~~~t~~~~~~lE~~I 267 (298)
T PRK07920 234 ---------D-GWGFRVHPPLDVP-----SAEDVAAMTQALADAFAANI 267 (298)
T ss_pred ---------C-eEEEEEeCCCCCC-----chhHHHHHHHHHHHHHHHHH
Confidence 1 2678888888753 23566667776666666554
No 104
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.77 E-value=0.00019 Score=70.72 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=62.6
Q ss_pred hCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCC-------ceeeeEecCCccc---chhHHHHHH---HHh
Q 010860 119 KCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTK-------RATGFVKRPGVLV---GKWKKLAVL---KEF 184 (499)
Q Consensus 119 ~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g-------~~tG~~~~~~~~~---g~~K~~~l~---~~~ 184 (499)
++- ..++-+++.+.. +..+++ .|+.-+-|.++.-. -| .+||.+...-. . +..|.++++ +.+
T Consensus 146 Re~SEp~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~--l~~~~~~~~~~~~~~~~~~~-~~~~~~dKg~A~~~L~~~y 220 (302)
T PRK12702 146 REYSEIFSYSGDPARL-REAFAQ-QEANLTQHLLRLHQ--LHFSDLPQWYLTGWMQPTLA-AEPNSLPGEQAVQLLLDCY 220 (302)
T ss_pred ccCCcceEecCCHHHH-HHHHHH-cCCeEEecCceEEe--cccccccccccccccccccc-cccCCCCHHHHHHHHHHHH
Confidence 344 778889998877 444555 78887777765422 12 35776543111 2 345655544 444
Q ss_pred CCC---CCeEEEeCCcCcHHHHhccccCeecC-CCCCCC
Q 010860 185 GED---APDLGIGDRQTDHDFMSICKEGYMVL-PSKSAK 219 (499)
Q Consensus 185 ~~~---~~~~aygDS~~D~pmL~~a~~~~~Vn-p~~~~~ 219 (499)
..+ -..+|.|||.||+|||+.|+.+++|. |+..+.
T Consensus 221 ~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~~~~~~~~ 259 (302)
T PRK12702 221 QRHLGPIKALGIGCSPPDLAFLRWSEQKVVLPSPIADSL 259 (302)
T ss_pred HhccCCceEEEecCChhhHHHHHhCCeeEEecCCCCCCc
Confidence 432 24679999999999999999999993 455554
No 105
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.75 E-value=0.00052 Score=80.18 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=55.7
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-----EEEeCeEEEecCCCceeeeEecCCcccchhHHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-----KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLA 179 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-----~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~ 179 (499)
.+|.+.+ +++++| ++.|+|++....++...+. +|++ .+++.+- +. .++ +. ++-...
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~-~~--~~K--------P~---Pe~~~~ 226 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADA-FE--NLK--------PA---PDIFLA 226 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcc-cc--cCC--------CC---HHHHHH
Confidence 3565555 788999 9999999999999999888 7763 3333321 00 000 11 112223
Q ss_pred HHHHhCC-CCCeEEEeCCcCcHHHHhccccCe
Q 010860 180 VLKEFGE-DAPDLGIGDRQTDHDFMSICKEGY 210 (499)
Q Consensus 180 l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~ 210 (499)
+.+.++. ...++.+|||.+|+.--+.+|-.+
T Consensus 227 a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~ 258 (1057)
T PLN02919 227 AAKILGVPTSECVVIEDALAGVQAARAAGMRC 258 (1057)
T ss_pred HHHHcCcCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 3334453 235788999999999888888643
No 106
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.65 E-value=0.00026 Score=68.42 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=64.1
Q ss_pred HHHHHHHhCC-CEEEEeC----CcHHHHHHHHhhhcCC--cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 112 ESYEVFDKCE-RKVVVTA----NPTLMVEPFVKDFLGG--DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSa----s~~~~v~~ia~~~lg~--d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
+.++.|+++| ++++||+ ..+..++.+.+. +|+ ++.. .+. ++|.. . ..+.|...+++ .
T Consensus 121 elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f--~vi-------l~gd~----~-~K~~K~~~l~~-~ 184 (237)
T PRK11009 121 QLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMN--PVI-------FAGDK----P-GQYTKTQWLKK-K 184 (237)
T ss_pred HHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccce--eEE-------EcCCC----C-CCCCHHHHHHh-c
Confidence 4455789999 9999999 467899999987 898 6432 111 22211 1 23557666653 2
Q ss_pred CCCCCeEEEeCCcCcHHHHhccccCeec---CCCCCCCCCCcc-cCCcee
Q 010860 185 GEDAPDLGIGDRQTDHDFMSICKEGYMV---LPSKSAKPLPRD-RLKSRI 230 (499)
Q Consensus 185 ~~~~~~~aygDS~~D~pmL~~a~~~~~V---np~~~~~~~~~~-~~~~~~ 230 (499)
+ .++.||||.+|+..-+.||-..+. .+...-.++|.. .++..+
T Consensus 185 ~---i~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~~~~~~~~~g~~ge~v 231 (237)
T PRK11009 185 N---IRIFYGDSDNDITAAREAGARGIRILRAANSTYKPLPQAGAFGEEV 231 (237)
T ss_pred C---CeEEEcCCHHHHHHHHHcCCcEEEEecCCCCCCCccccccCCCcee
Confidence 3 478899999999988888876442 234444556653 334443
No 107
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.00011 Score=81.26 Aligned_cols=89 Identities=21% Similarity=0.224 Sum_probs=73.2
Q ss_pred HHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 105 YAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 105 ~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
+.+.++|++.+ .+|++| +++++||-.+..++.+|++ ||+|++.+- +.-++|++.+
T Consensus 534 ~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ae--------------------llPedK~~~V 592 (713)
T COG2217 534 LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAE--------------------LLPEDKAEIV 592 (713)
T ss_pred EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhecc--------------------CCcHHHHHHH
Confidence 45667887765 799999 9999999999999999999 999977651 1347799888
Q ss_pred HHHhCCCCCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 181 LKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 181 ~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
++.-.........||+.||.|-|..|+-.++..-
T Consensus 593 ~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~ 626 (713)
T COG2217 593 RELQAEGRKVAMVGDGINDAPALAAADVGIAMGS 626 (713)
T ss_pred HHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecC
Confidence 8875322245578999999999999999999987
No 108
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.62 E-value=0.0023 Score=60.15 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=52.3
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcC----CcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLG----GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg----~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
++|++.+ .++++| +++|+|.++...++.+...+.+ +|.++++.- +. .+| + .++-...+
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~-~~--~~K--------P---~p~~~~~~ 150 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD-LG--MRK--------P---EARIYQHV 150 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc-cC--CCC--------C---CHHHHHHH
Confidence 5666655 678899 9999999998777765443233 355555431 11 011 1 11222334
Q ss_pred HHHhCCC-CCeEEEeCCcCcHHHHhccccC
Q 010860 181 LKEFGED-APDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 181 ~~~~~~~-~~~~aygDS~~D~pmL~~a~~~ 209 (499)
.+.+|.. ..++.+|||..|+.--+.+|-.
T Consensus 151 ~~~~~~~p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 151 LQAEGFSAADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred HHHcCCChhHeEEeCCCHHHHHHHHHcCCE
Confidence 4445532 3578899999998777777754
No 109
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.61 E-value=0.00038 Score=63.87 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=46.2
Q ss_pred ccHHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhcCCc----EEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 109 VRKESYEVFDKCERKVVVTANPTLMVEPFVKDFLGGD----KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 109 i~~~~~~~~~~~G~vvlvSas~~~~v~~ia~~~lg~d----~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
.+|.+.+.++ ++.|+|.+...+++.+.++ +|+. .|++++ ++. . + ++. .+=-..+.+.+
T Consensus 91 ~~~g~~~~L~---~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~-~~~----~--~----KP~---p~~f~~~~~~~ 152 (175)
T TIGR01493 91 PWPDSAAALA---RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVD-TVR----A--Y----KPD---PVVYELVFDTV 152 (175)
T ss_pred CCCchHHHHH---HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHh-hcC----C--C----CCC---HHHHHHHHHHH
Confidence 5677777676 4789999999999999998 8863 344333 111 0 0 011 11112233345
Q ss_pred CCC-CCeEEEeCCcCcHHH
Q 010860 185 GED-APDLGIGDRQTDHDF 202 (499)
Q Consensus 185 ~~~-~~~~aygDS~~D~pm 202 (499)
|.. ..++.+|||..|+.-
T Consensus 153 ~~~p~~~l~vgD~~~Di~~ 171 (175)
T TIGR01493 153 GLPPDRVLMVAAHQWDLIG 171 (175)
T ss_pred CCCHHHeEeEecChhhHHH
Confidence 532 357899999999754
No 110
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.59 E-value=0.00019 Score=78.54 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=67.9
Q ss_pred HhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 106 AADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 106 ~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
.+.++|++.+ +++++| +++|+|+..+..++.++++ +|++ +.+ . +..+.|.+.++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-~~~-------------------~-~~p~~K~~~v~ 460 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-VRA-------------------E-VLPDDKAALIK 460 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-EEc-------------------c-CChHHHHHHHH
Confidence 3446776554 788999 9999999999999999999 9996 111 1 13467888888
Q ss_pred HHhCCCCCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 182 KEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 182 ~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
++......++++||+.||.|+++.|+-+++++.
T Consensus 461 ~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~ 493 (562)
T TIGR01511 461 ELQEKGRVVAMVGDGINDAPALAQADVGIAIGA 493 (562)
T ss_pred HHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCC
Confidence 765433357789999999999999999888774
No 111
>PRK09449 dUMP phosphatase; Provisional
Probab=97.58 E-value=0.0038 Score=59.67 Aligned_cols=90 Identities=14% Similarity=-0.021 Sum_probs=56.1
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
.+|.+.+ .++ +| ++.|+|.+....++...+. +|+ |.+++++-. |. .++. .+-...+
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~-----~~------~KP~---p~~~~~~ 159 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQV-----GV------AKPD---VAIFDYA 159 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECcc-----CC------CCCC---HHHHHHH
Confidence 4555544 566 68 9999999999888888888 886 444443310 10 0111 1222333
Q ss_pred HHHhCC-C-CCeEEEeCCc-CcHHHHhccccC-eecCC
Q 010860 181 LKEFGE-D-APDLGIGDRQ-TDHDFMSICKEG-YMVLP 214 (499)
Q Consensus 181 ~~~~~~-~-~~~~aygDS~-~D~pmL~~a~~~-~~Vnp 214 (499)
.+.+|. . ..++.+|||. +|+.--+.+|-. +.++.
T Consensus 160 ~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 160 LEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred HHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 344553 2 3478899998 799999988875 45553
No 112
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.49 E-value=0.00047 Score=68.32 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=31.6
Q ss_pred hHHHHHHHH---hC-CC-CCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 175 WKKLAVLKE---FG-ED-APDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 175 ~K~~~l~~~---~~-~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
.|...++.. +| .. ...+++|||.||++|++.++.++++.-.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 566656554 44 23 4578999999999999999999999753
No 113
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.49 E-value=0.0019 Score=57.84 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=48.7
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcC--CcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCC
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLG--GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED 187 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg--~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~ 187 (499)
.++++.++++| ++.|+|++....++.+.+.+++ ++.+++++ .. + +.+. .+-...+.+.++..
T Consensus 70 ~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~~f~~i~~~~-------~~--~---~Kp~---~~~~~~~~~~~~~~ 134 (154)
T TIGR01549 70 ADLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGDYFDLILGSD-------EF--G---AKPE---PEIFLAALESLGLP 134 (154)
T ss_pred HHHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHhcCcEEEecC-------CC--C---CCcC---HHHHHHHHHHcCCC
Confidence 34555788899 9999999999999988887211 23333221 11 1 0011 12223334444532
Q ss_pred CCeEEEeCCcCcHHHHhccc
Q 010860 188 APDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 188 ~~~~aygDS~~D~pmL~~a~ 207 (499)
..++.+|||.+|+..-+.+|
T Consensus 135 ~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 135 PEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCEEEEeCCHHHHHHHHHcc
Confidence 26788999999988766543
No 114
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.48 E-value=0.0035 Score=59.86 Aligned_cols=93 Identities=18% Similarity=0.093 Sum_probs=57.0
Q ss_pred hccHHHHHHHHhCC-C--EEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHH-HH
Q 010860 108 DVRKESYEVFDKCE-R--KVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKK-LA 179 (499)
Q Consensus 108 ~i~~~~~~~~~~~G-~--vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~-~~ 179 (499)
..++++++.+++.+ + ++|+|=+.....+...++ +|+ |.|+.++-. | ... +. .+. +.
T Consensus 99 ~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~---------g-~~K-P~----~~~f~~ 162 (229)
T COG1011 99 PDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDV---------G-VAK-PD----PEIFEY 162 (229)
T ss_pred ccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEeccc---------c-cCC-CC----cHHHHH
Confidence 46788888887766 6 999999888888888888 885 555544421 1 111 11 111 33
Q ss_pred HHHHhCC-CCCeEEEeCCc-CcHHHHhccc-cCeecCCCC
Q 010860 180 VLKEFGE-DAPDLGIGDRQ-TDHDFMSICK-EGYMVLPSK 216 (499)
Q Consensus 180 l~~~~~~-~~~~~aygDS~-~D~pmL~~a~-~~~~Vnp~~ 216 (499)
+.+.+|. ...++.+|||. +|+.--+.+| +.+.+|...
T Consensus 163 ~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 163 ALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred HHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 3444563 33578899998 7744444444 455666544
No 115
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.46 E-value=0.00033 Score=77.57 Aligned_cols=86 Identities=19% Similarity=0.174 Sum_probs=69.6
Q ss_pred hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH
Q 010860 107 ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK 182 (499)
Q Consensus 107 ~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~ 182 (499)
+.++|++.+ .+|+.| +++++||-...-++.+|++ +|+|+++| . +.-|.|.+.+++
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v~A-------------------~-~~PedK~~iV~~ 502 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFLA-------------------E-ATPEDKLALIRQ 502 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEEEc-------------------c-CCHHHHHHHHHH
Confidence 345776655 789999 9999999999999999999 99987543 1 255789998888
Q ss_pred HhCCCCCeE-EEeCCcCcHHHHhccccCeecCC
Q 010860 183 EFGEDAPDL-GIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 183 ~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
+-.. +..+ ..||+.||.|-|+.|+-.++.+.
T Consensus 503 lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMgs 534 (679)
T PRK01122 503 EQAE-GRLVAMTGDGTNDAPALAQADVGVAMNS 534 (679)
T ss_pred HHHc-CCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 6432 3344 56999999999999999999994
No 116
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.45 E-value=0.00036 Score=79.96 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=69.2
Q ss_pred hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH
Q 010860 107 ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK 182 (499)
Q Consensus 107 ~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~ 182 (499)
+.++|++.+ .++++| +++++|+..+..++.++++ +|++++++. . .-++|.+.+++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~-------------------~-~p~~K~~~i~~ 707 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAG-------------------V-LPDGKAEAIKR 707 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeC-------------------C-CHHHHHHHHHH
Confidence 345666554 688999 9999999999999999999 999864431 1 23569888888
Q ss_pred HhCCCCCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 183 EFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 183 ~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
+.......+++||+.||.|+|+.|+..++.+..
T Consensus 708 l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g 740 (834)
T PRK10671 708 LQSQGRQVAMVGDGINDAPALAQADVGIAMGGG 740 (834)
T ss_pred HhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCC
Confidence 643333577899999999999999999988753
No 117
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.41 E-value=0.0022 Score=61.49 Aligned_cols=93 Identities=15% Similarity=0.096 Sum_probs=59.5
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC-CCC
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE-DAP 189 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~-~~~ 189 (499)
+.++.++++| .+.++|+|+...++.+.+. +|+.+.+...+.- +....|+-.. +-=..+.+ .+|. ...
T Consensus 93 ~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~---~dv~~~KP~P------d~yL~Aa~-~Lgv~P~~ 161 (221)
T COG0637 93 ELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTA---DDVARGKPAP------DIYLLAAE-RLGVDPEE 161 (221)
T ss_pred HHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccH---HHHhcCCCCC------HHHHHHHH-HcCCChHH
Confidence 3445789999 9999999999999999988 8864433322211 1111221111 11112222 2342 236
Q ss_pred eEEEeCCcCcHHHHhccccCeecCCC
Q 010860 190 DLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 190 ~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
|+++-||.+.+.--..||-.++.-++
T Consensus 162 CvviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 162 CVVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred eEEEecchhHHHHHHHCCCEEEEecC
Confidence 99999999999999999988777665
No 118
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]
Probab=97.37 E-value=0.00038 Score=72.23 Aligned_cols=144 Identities=17% Similarity=0.166 Sum_probs=88.1
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccc-----ccc---ccccCCeeEeecC------CHHHH-------HH
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK-----LSR---FLSPIPAIALTRD------RAADA-------AR 358 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k-----~~~---~~~~~~~i~i~R~------~~~~~-------~~ 358 (499)
+-|.|++.=|.|.+|-+++..++-.. ..-...++. .|. ++..+|.+||.|. .++++ ..
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~-~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~y 235 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHF-GIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSY 235 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhc-CcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHH
Confidence 35799999999999999988876211 111122222 111 1344599999881 12332 14
Q ss_pred HHHHhhCC-CEEEecCCeecCCCcccccchhh-------hh----cCCcEEEEEEeeccCCcccccc---CC-ccccccc
Q 010860 359 ISELLQKG-DLVVCPEGTTCRENFLLRFSALF-------AE----MSDRIVPVAVNCKQNMFYGTTV---RG-VKFWDPY 422 (499)
Q Consensus 359 ~~~~l~~G-~l~IFPEGTrt~~~~l~~Fk~~~-------~~----~~~pVvPV~I~~~~~~~~~~~~---~~-~~~~~~~ 422 (499)
+.++|++| ++=+|-|||||+.+.-..-|++. +. ..+-++||.+.|.+- .+|.-. .| .+.-+.+
T Consensus 236 i~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRi-veG~f~~EQ~G~pK~~ES~ 314 (715)
T KOG3729|consen 236 IEQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRV-VEGIFLHEQMGIPKVRESV 314 (715)
T ss_pred HHHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHH-hhhhhhHHhcCCCCccHHH
Confidence 57889999 49999999999877655555332 11 345799999999863 222211 11 1222222
Q ss_pred -------cccc-CCCCeEEEEEccccCCccc
Q 010860 423 -------FFFM-NPRPTYEVTFLDRLPEEMT 445 (499)
Q Consensus 423 -------~~~~-~~~~~v~v~~l~pi~~~~~ 445 (499)
|..+ ..++.++|.|.+|++..++
T Consensus 315 ~~v~rGi~~~L~kNYG~vR~DF~~P~Sl~Ey 345 (715)
T KOG3729|consen 315 LGVFRGIFSGLSKNYGVVRMDFGRPISLTEY 345 (715)
T ss_pred HHHHHHHHHHHhhcCCeEEEecCCCccHHHH
Confidence 3333 3455899999999987543
No 119
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.29 E-value=0.0021 Score=59.57 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccc-hhhhhcCCcEEEEEEeeccCCccccccCCcccccccccccCCCC
Q 010860 353 AADAARISELLQKGD-LVVCPEGTTCRENFLLRFS-ALFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMNPRP 430 (499)
Q Consensus 353 ~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk-~~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (499)
.++..++.+.|++|. ++|-|+|-+..-.....-- .++...++||+||.+.+++.+. .+.| |.+ -+..|+.
T Consensus 104 ~~Alr~l~k~Lk~G~~i~itpDgPkGp~~~~~~Gii~LA~~sg~pi~pv~~~~sr~~~----lKsW---Dk~-~IP~PFg 175 (214)
T COG2121 104 ISALRALLKALKQGKSIAITPDGPKGPVHKIGDGIIALAQKSGVPIIPVGVATSRCWR----LKTW---DKT-IIPLPFG 175 (214)
T ss_pred HHHHHHHHHHHhCCCcEEEcCCCCCCCceeccchhhHhhHhcCCCeEEEEEeeeeeee----eccc---ccc-cccCccc
Confidence 456678888999995 9999999875433222221 3455689999999999987322 1222 110 1234666
Q ss_pred eEEEEEccccCCcccccCCCCCHHHHHHHHHHHH
Q 010860 431 TYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVL 464 (499)
Q Consensus 431 ~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i 464 (499)
++++.+++|+..+ .+++.+++.++.++..
T Consensus 176 k~~i~~gePi~~~-----~D~~~~~l~~~~~~~~ 204 (214)
T COG2121 176 KIKIVLGEPIEVD-----ADKDKEELEEKRQEVS 204 (214)
T ss_pred eeEEEecCceeec-----ccccHHHHHHHHHHHH
Confidence 9999999999886 3456666666655444
No 120
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.26 E-value=0.00066 Score=75.07 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=69.7
Q ss_pred hhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH
Q 010860 107 ADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK 182 (499)
Q Consensus 107 ~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~ 182 (499)
+.+||++.+ ++|+.| +++++||-...-++.+|++ +|+|++++ .+ .-|.|.+.+++
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A-------------------~~-~PedK~~iV~~ 498 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVA-------------------EC-KPEDKINVIRE 498 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEc-------------------CC-CHHHHHHHHHH
Confidence 346776655 789999 9999999999999999999 99986543 12 45789998888
Q ss_pred HhCCCCCeEE-EeCCcCcHHHHhccccCeecCC
Q 010860 183 EFGEDAPDLG-IGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 183 ~~~~~~~~~a-ygDS~~D~pmL~~a~~~~~Vnp 214 (499)
+-. ++..+| .||+.||.|-|+.|+-.++.+.
T Consensus 499 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 499 EQA-KGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred HHh-CCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 643 234555 5999999999999999999994
No 121
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.26 E-value=0.00069 Score=63.03 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=58.3
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH---hCCC-
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE---FGED- 187 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~---~~~~- 187 (499)
+++.++++| .++|+|+.+...+++++++ +|++++.. | ++.|...++++ +|..
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---------g-------------~~~k~~~l~~~~~~~gl~~ 112 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---------G-------------QSNKLIAFSDLLEKLAIAP 112 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---------C-------------CCcHHHHHHHHHHHhCCCH
Confidence 344566789 9999999999999999999 99875431 1 11244444444 4422
Q ss_pred CCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 188 APDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 188 ~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
..++++|||.+|+++++.++.+++|+.
T Consensus 113 ~ev~~VGDs~~D~~~a~~aG~~~~v~~ 139 (183)
T PRK09484 113 EQVAYIGDDLIDWPVMEKVGLSVAVAD 139 (183)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEecCC
Confidence 247789999999999999999998864
No 122
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.16 E-value=0.0041 Score=62.42 Aligned_cols=155 Identities=14% Similarity=0.141 Sum_probs=98.6
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeeccccccccccc--------CCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRFLSP--------IPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~~~~--------~~~i~i~R~~~~~ 355 (499)
+++++|.|++... .+++|+|+++-|.+.+|+.........+....++-=.| .+.+.+ .|.-.+.+. ..+
T Consensus 106 ~~~v~g~e~l~e~l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~-np~ld~~i~~~R~r~~~~~~~~~-~~~ 183 (308)
T COG1560 106 RVEVEGLEHLEEALANGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPK-NPLLDWLITRGRERFGGRLLPRK-GEG 183 (308)
T ss_pred eeeecCHHHHHHHHHcCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCC-CHHHHHHHHHHHHhcCCcccCCC-chh
Confidence 5899999986421 24589999999999999988877653332122222222 122211 132333332 278
Q ss_pred HHHHHHHhhCCC-EEEecCCeecCCCc-ccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTCRENF-LLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt~~~~-l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
++.+.+.|++|. +++-|+=..+.+.. ..||=+ ++...+++|+|+......
T Consensus 184 ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~----------------- 246 (308)
T COG1560 184 IRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNP----------------- 246 (308)
T ss_pred HHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeC-----------------
Confidence 889999999997 88999988887665 345531 222368999999986542
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
....+++++.||.... ..+|.++.+++.-+.|++..
T Consensus 247 -----~g~~y~l~i~p~~~~~-----~~~D~~~~a~~mn~~~E~~I 282 (308)
T COG1560 247 -----DGSGYTLHIHPPMTDD-----PSEDVEADAQRMNDFVEKWI 282 (308)
T ss_pred -----CCCeEEEEEeccccCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 1125788888866532 34667776666666665544
No 123
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.15 E-value=0.011 Score=57.22 Aligned_cols=87 Identities=17% Similarity=0.077 Sum_probs=47.9
Q ss_pred ccHHHHH---HHHhCCCEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 109 VRKESYE---VFDKCERKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 109 i~~~~~~---~~~~~G~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
++|++.+ .+++..+++|+|.+...+ +. +|+ |.+++++-. +. .++. .+-...+.
T Consensus 114 ~~~gv~~~L~~L~~~~~l~i~Tn~~~~~-----~~-~gl~~~fd~i~~~~~~-----~~------~KP~---p~~~~~a~ 173 (238)
T PRK10748 114 VPQATHDTLKQLAKKWPLVAITNGNAQP-----EL-FGLGDYFEFVLRAGPH-----GR------SKPF---SDMYHLAA 173 (238)
T ss_pred CCccHHHHHHHHHcCCCEEEEECCCchH-----HH-CCcHHhhceeEecccC-----Cc------CCCc---HHHHHHHH
Confidence 4455444 555423888999876542 44 664 555554321 11 0011 11222233
Q ss_pred HHhCC-CCCeEEEeCC-cCcHHHHhcccc-CeecCCC
Q 010860 182 KEFGE-DAPDLGIGDR-QTDHDFMSICKE-GYMVLPS 215 (499)
Q Consensus 182 ~~~~~-~~~~~aygDS-~~D~pmL~~a~~-~~~Vnp~ 215 (499)
+.+|. ...++.+||| ..|+.--+.+|- .+.|++.
T Consensus 174 ~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 174 EKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred HHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 34453 2357889999 599999888884 4556664
No 124
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.13 E-value=0.0021 Score=60.19 Aligned_cols=122 Identities=15% Similarity=0.236 Sum_probs=74.6
Q ss_pred EEEecCCceeecCCchHHHHHHHHHhcc-hHHHHHHHhhHHHHHHHh-h--cCChhHHHHHHH-HHHhcCCCHHHHHHHH
Q 010860 23 IAADLDGTLLVSRSSFPYFMLVAVEAGG-LLRGLALLVSLPIAIIAY-L--FISEAIGIQILI-FISFSGLKIRDIELAS 97 (499)
Q Consensus 23 avFD~DgTL~~~~s~~~~~~~~~~~~~~-~~r~~~~~~~~p~~~~~~-~--~~~~~~~~~~~~-~~~l~G~~~~~l~~~~ 97 (499)
.|||++|-+...|-++.....+ +..++ +.+.+. .+--+.+.. + -+..+..++.++ +..-.|.+.++++.++
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~-~pngrrfF~~~S---eyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~s 78 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAV-FPNGRRFFSNLS---EYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRIS 78 (315)
T ss_pred ccccCCCCCccchhHHHHHHHH-cCCHHHHHHhhh---hhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHH
Confidence 6899999999988887766665 32222 222211 111111110 1 122222233221 2235699999998877
Q ss_pred HHHhhhHHHhhccHHHHHHHHhCC---CEEEEeCCcHHHHHHHHhhhcCC--cEEEeCeEEEe
Q 010860 98 RAVLPRFYAADVRKESYEVFDKCE---RKVVVTANPTLMVEPFVKDFLGG--DKVLGTEIEVN 155 (499)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~~~~~G---~vvlvSas~~~~v~~ia~~~lg~--d~vigt~l~~~ 155 (499)
+.-. .+-|.+-+.++..+ .-+++|.|.+.+++.+|.. +|+ .++-||++..+
T Consensus 79 E~sa------~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~Prg~~~~Te~~lD 134 (315)
T COG4030 79 ELSA------KLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGVPRGELHGTEVDLD 134 (315)
T ss_pred Hhhc------ccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCCCccccccccccCc
Confidence 6432 24466655444333 6789999999999999999 998 58889998775
No 125
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.12 E-value=0.00076 Score=60.77 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=53.7
Q ss_pred HHhhccHHHHHHHHhCC-CEEEEeCCc----HHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHH
Q 010860 105 YAADVRKESYEVFDKCE-RKVVVTANP----TLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLA 179 (499)
Q Consensus 105 ~~~~i~~~~~~~~~~~G-~vvlvSas~----~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~ 179 (499)
+...+..+.++.|+++| .|+.|||-. +-..+-+++. +.++...... |+|.-..+ ..-.|...
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~pv~---------f~Gdk~k~---~qy~Kt~~ 180 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNPVI---------FAGDKPKP---GQYTKTQW 180 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhh-cccCCCccee---------eccCCCCc---ccccccHH
Confidence 34445566778999999 999999864 3444455555 5554322211 33422211 23357666
Q ss_pred HHHHhCCCCCeEEEeCCcCcHHHHhcccc
Q 010860 180 VLKEFGEDAPDLGIGDRQTDHDFMSICKE 208 (499)
Q Consensus 180 l~~~~~~~~~~~aygDS~~D~pmL~~a~~ 208 (499)
|++ ....+.||||.+|+---+-||-
T Consensus 181 i~~----~~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 181 IQD----KNIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred HHh----cCceEEecCCchhhhHHHhcCc
Confidence 664 3357899999999987776654
No 126
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.10 E-value=0.0011 Score=72.29 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=66.6
Q ss_pred hccHHHHH---HHHhCC--CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH
Q 010860 108 DVRKESYE---VFDKCE--RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK 182 (499)
Q Consensus 108 ~i~~~~~~---~~~~~G--~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~ 182 (499)
.++|++.+ .++++| +++++|+.++..++.++++ +|++++.+ . +..+.|.+.+++
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~-------------------~-~~p~~K~~~i~~ 420 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHA-------------------E-LLPEDKLEIVKE 420 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhh-------------------c-cCcHHHHHHHHH
Confidence 35665554 788899 5889999999999999999 99976432 1 134578887877
Q ss_pred HhCCCCCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 183 EFGEDAPDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 183 ~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
+.........+||+.||.|+++.|+.++++..
T Consensus 421 l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~ 452 (536)
T TIGR01512 421 LREKYGPVAMVGDGINDAPALAAADVGIAMGA 452 (536)
T ss_pred HHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCC
Confidence 64333356788999999999999999888874
No 127
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.09 E-value=0.0015 Score=71.51 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=66.4
Q ss_pred hhccHHHHH---HHHhCC--CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 107 ADVRKESYE---VFDKCE--RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 107 ~~i~~~~~~---~~~~~G--~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
..++|++.+ +++++| +++|+|+.+...++.++++ +|++++.+. + ..+.|.+.++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~-------------------~-~p~~K~~~v~ 441 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAE-------------------L-LPEDKLAIVK 441 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeecc-------------------C-CHHHHHHHHH
Confidence 346666555 678888 7889999999999999999 999764431 1 3467888777
Q ss_pred HHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 182 KEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 182 ~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
++......+.++||+.||.|+++.|+-.++.+
T Consensus 442 ~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g 473 (556)
T TIGR01525 442 ELQEEGGVVAMVGDGINDAPALAAADVGIAMG 473 (556)
T ss_pred HHHHcCCEEEEEECChhHHHHHhhCCEeEEeC
Confidence 76533335678899999999999999877777
No 128
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.04 E-value=0.0017 Score=59.54 Aligned_cols=83 Identities=16% Similarity=0.090 Sum_probs=59.6
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CCeE
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-APDL 191 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~ 191 (499)
+..++++| .+.|+|+..+..++.+++. +|+.++.. +. . + . ..-...+.+.++.. ..++
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~---------~~------k-p--k-p~~~~~~~~~l~~~~~ev~ 102 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHE---------GI------K-K--K-TEPYAQMLEEMNISDAEVC 102 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEe---------cC------C-C--C-HHHHHHHHHHcCcCHHHEE
Confidence 44577889 9999999999999999999 99875442 10 1 1 1 12233344444532 2477
Q ss_pred EEeCCcCcHHHHhccccCeecCCCC
Q 010860 192 GIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 192 aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
++|||.+|++|++.++.++++.-..
T Consensus 103 ~iGD~~nDi~~~~~ag~~~am~nA~ 127 (169)
T TIGR02726 103 YVGDDLVDLSMMKRVGLAVAVGDAV 127 (169)
T ss_pred EECCCHHHHHHHHHCCCeEECcCch
Confidence 8899999999999999999988643
No 129
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=96.93 E-value=0.007 Score=60.61 Aligned_cols=156 Identities=13% Similarity=0.153 Sum_probs=95.7
Q ss_pred EEEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc-------cccCCeeEeecCCHH
Q 010860 284 IHLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF-------LSPIPAIALTRDRAA 354 (499)
Q Consensus 284 i~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~-------~~~~~~i~i~R~~~~ 354 (499)
.+++++|.|++.+. ..++|+|+++-|...+|........ ..++..+.... +.+.+ ....|.-.+.++ .
T Consensus 103 ~~~~~~g~e~l~~a~~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~-~n~~~~~~~~~~R~~~g~~~i~~~--~ 179 (295)
T PF03279_consen 103 KRVEIEGEEHLEAALAEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQ-KNPYIDRLLNKLRERFGIELIPKG--E 179 (295)
T ss_pred eEEEEECHHHHHHHHhcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCC-ccHhHHHHHHHHHHhcCCeEecch--h
Confidence 46889998876411 2468999999999999986554432 22322222211 11222 112244445443 2
Q ss_pred HHHHHHHHhhCCC-EEEecCCeecCC-Ccccccc-------hh----hhhcCCcEEEEEEeeccCCccccccCCcccccc
Q 010860 355 DAARISELLQKGD-LVVCPEGTTCRE-NFLLRFS-------AL----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDP 421 (499)
Q Consensus 355 ~~~~~~~~l~~G~-l~IFPEGTrt~~-~~l~~Fk-------~~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~ 421 (499)
.+..+.+.|++|. +++.+....... +.-.+|= .+ +...++||+||.+..... +
T Consensus 180 ~~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~--------~------ 245 (295)
T PF03279_consen 180 GIRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD--------G------ 245 (295)
T ss_pred hHHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC--------C------
Confidence 3777888999997 888888765433 3333543 12 223799999999865421 1
Q ss_pred cccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhC
Q 010860 422 YFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLG 469 (499)
Q Consensus 422 ~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~ 469 (499)
..+++++.||++.. ..++.+++++++-+.+++...
T Consensus 246 --------~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~lE~~Ir 280 (295)
T PF03279_consen 246 --------SHYRIEIEPPLDFP-----SSEDIEELTQRYNDRLEEWIR 280 (295)
T ss_pred --------CEEEEEEeecccCC-----ccchHHHHHHHHHHHHHHHHH
Confidence 15778888888765 234777777777777776653
No 130
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.87 E-value=0.003 Score=72.60 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=69.1
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc---EEEeCeEEEecCCCceee-----eEecCCcccchhH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD---KVLGTEIEVNPRTKRATG-----FVKRPGVLVGKWK 176 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d---~vigt~l~~~~~~g~~tG-----~~~~~~~~~g~~K 176 (499)
+|+++. +.++++| +++++||.....++.+|++ +|++ -+.|.+++.-+ +..+.. .+.. . +.-+.|
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~~v~~g~~l~~~~-~~el~~~~~~~~vfA-r-~~Pe~K 591 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDANDFLLGADIEELS-DEELARELRKYHIFA-R-LTPMQK 591 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCeeecHhhhhCC-HHHHHHHhhhCeEEE-E-CCHHHH
Confidence 455544 4789999 9999999999999999999 9995 23333332110 111110 1111 1 245789
Q ss_pred HHHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecCC
Q 010860 177 KLAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 177 ~~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
.+-++++-. ++..+ ..||+.||.|.|+.|+-.++++.
T Consensus 592 ~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~ 629 (867)
T TIGR01524 592 SRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDT 629 (867)
T ss_pred HHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCC
Confidence 888877543 23444 57999999999999999999984
No 131
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.81 E-value=0.0022 Score=56.88 Aligned_cols=83 Identities=19% Similarity=0.141 Sum_probs=61.0
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh---CCCC
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF---GEDA 188 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~---~~~~ 188 (499)
+++.+++.| ++.|+||=.+.+|+.=++. ||++++. +|. ..|...+++.. +-..
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~---------qG~-------------~dK~~a~~~L~~~~~l~~ 99 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLY---------QGI-------------SDKLAAFEELLKKLNLDP 99 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceee---------ech-------------HhHHHHHHHHHHHhCCCH
Confidence 345577889 9999999999999999999 9997643 121 23665555544 3222
Q ss_pred C-eEEEeCCcCcHHHHhccccCeecCCCCCC
Q 010860 189 P-DLGIGDRQTDHDFMSICKEGYMVLPSKSA 218 (499)
Q Consensus 189 ~-~~aygDS~~D~pmL~~a~~~~~Vnp~~~~ 218 (499)
. +.+.||-.+|+|+|+.|+-+++|.....|
T Consensus 100 e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~ 130 (170)
T COG1778 100 EEVAYVGDDLVDLPVMEKVGLSVAVADAHPL 130 (170)
T ss_pred HHhhhhcCccccHHHHHHcCCcccccccCHH
Confidence 2 33459999999999999999999876543
No 132
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.78 E-value=0.0043 Score=68.90 Aligned_cols=91 Identities=14% Similarity=0.168 Sum_probs=71.5
Q ss_pred HHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH
Q 010860 105 YAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV 180 (499)
Q Consensus 105 ~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l 180 (499)
+.+.++|++.. .+|+.| +++++||-.+--++.+|++ +|+|.|.|-- .-++|++.+
T Consensus 720 l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VGi~~V~aev--------------------~P~~K~~~I 778 (951)
T KOG0207|consen 720 LEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VGIDNVYAEV--------------------LPEQKAEKI 778 (951)
T ss_pred eccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hCcceEEecc--------------------CchhhHHHH
Confidence 45567777654 799999 9999999999999999999 9998877622 224566667
Q ss_pred HHHhCCCCCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 181 LKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 181 ~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
++...+.......||+.||-|=|..|+-.++++-..
T Consensus 779 k~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 779 KEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGS 814 (951)
T ss_pred HHHHhcCCcEEEEeCCCCccHHHHhhccceeecccc
Confidence 665543334556899999999999999999988764
No 133
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.78 E-value=0.0073 Score=52.70 Aligned_cols=31 Identities=10% Similarity=0.097 Sum_probs=25.4
Q ss_pred HHHHHHHhCC-CEEEEeCC-cHHHHHHHHhhhcC
Q 010860 112 ESYEVFDKCE-RKVVVTAN-PTLMVEPFVKDFLG 143 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas-~~~~v~~ia~~~lg 143 (499)
+.+++++++| +++|+|++ ...++..+.+. +|
T Consensus 36 e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~ 68 (128)
T TIGR01681 36 DKLQTLKKNGFLLALASYNDDPHVAYELLKI-FE 68 (128)
T ss_pred HHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-cc
Confidence 4455778899 99999999 88888888787 66
No 134
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.77 E-value=0.0081 Score=56.85 Aligned_cols=86 Identities=13% Similarity=0.002 Sum_probs=47.7
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHH--HHHHHhhhcC----CcEEEeCeEEEecCCCceeeeEecCCcccchhHHH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLM--VEPFVKDFLG----GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKL 178 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~--v~~ia~~~lg----~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~ 178 (499)
++|.+.+ .++++| +++|+|.+.... ....... ++ +|.++++.-. |. .++. .+-..
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~-----~~------~KP~---p~~~~ 159 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLE-----GL------RKPD---PRIYQ 159 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeec-----CC------CCCC---HHHHH
Confidence 4565554 678899 999999876432 2211222 23 4666654311 10 0011 11223
Q ss_pred HHHHHhCCC-CCeEEEeCCcCcHHHHhccccC
Q 010860 179 AVLKEFGED-APDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 179 ~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~ 209 (499)
.+.+.+|.. ..++.+||+..|+..-+.+|-.
T Consensus 160 ~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 160 LMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 333445532 2467789999999998888754
No 135
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.70 E-value=0.0046 Score=69.90 Aligned_cols=86 Identities=20% Similarity=0.207 Sum_probs=67.2
Q ss_pred HhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 106 AADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 106 ~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
.+.++|++.+ .+++.| +++++||.....++.+|++ +|++. . . .. ..++|...++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~--------~--~----------~~-~p~~K~~~v~ 623 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDF--------R--A----------GL-LPEDKVKAVT 623 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCe--------e--c----------CC-CHHHHHHHHH
Confidence 3456776665 688999 9999999999999999999 99962 1 0 11 3467998888
Q ss_pred HHhCCCCCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 182 KEFGEDAPDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 182 ~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
++- ........||+.||.|+|+.|+-.+++..
T Consensus 624 ~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~ 655 (741)
T PRK11033 624 ELN-QHAPLAMVGDGINDAPAMKAASIGIAMGS 655 (741)
T ss_pred HHh-cCCCEEEEECCHHhHHHHHhCCeeEEecC
Confidence 764 33356677999999999999999988874
No 136
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.54 E-value=0.019 Score=52.56 Aligned_cols=84 Identities=14% Similarity=0.155 Sum_probs=49.1
Q ss_pred HHHHHHHhCC-CEEEEeCCcHH------------HHHHHHhhhcCCcE--EEeCeEEEecCCCceeeeEecCCcccchhH
Q 010860 112 ESYEVFDKCE-RKVVVTANPTL------------MVEPFVKDFLGGDK--VLGTEIEVNPRTKRATGFVKRPGVLVGKWK 176 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~------------~v~~ia~~~lg~d~--vigt~l~~~~~~g~~tG~~~~~~~~~g~~K 176 (499)
++++.++++| +++|+|..+.. .++.+.++ +|++. +++++ ++. . ..+. .+-
T Consensus 49 e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~~~ii~~~------~~~----~-~KP~---p~~ 113 (166)
T TIGR01664 49 AKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPIQVLAATH------AGL----Y-RKPM---TGM 113 (166)
T ss_pred HHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCEEEEEecC------CCC----C-CCCc---cHH
Confidence 3456678899 99999987653 46778888 88753 22221 110 0 0111 122
Q ss_pred HHHHHHHhC--C-CCCeEEEeCCc--------CcHHHHhccccCe
Q 010860 177 KLAVLKEFG--E-DAPDLGIGDRQ--------TDHDFMSICKEGY 210 (499)
Q Consensus 177 ~~~l~~~~~--~-~~~~~aygDS~--------~D~pmL~~a~~~~ 210 (499)
...+.+.+| . ...++.+||+. +|+..-+.+|-.+
T Consensus 114 ~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 114 WEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred HHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 233344444 2 23578899986 5888777776554
No 137
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.53 E-value=0.0064 Score=71.15 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=67.9
Q ss_pred hccHH---HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--EEEeCeEEEecCCCceeee-----------------
Q 010860 108 DVRKE---SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--KVLGTEIEVNPRTKRATGF----------------- 164 (499)
Q Consensus 108 ~i~~~---~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~vigt~l~~~~~~g~~tG~----------------- 164 (499)
.++++ +++.++++| +++++||-...-+..+|++ +|+. +.+.+.-+..+ +..+||.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~-~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMD-SMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCcccccccccccc-ceeeehHHhhhcCHHHHHHHhhcC
Confidence 34554 445789999 9999999999999999999 9983 22211111000 1233442
Q ss_pred -EecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 165 -VKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 165 -~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
+.. . +.-+.|.+-++.+-.......+.||+.||.|+|+.|+-.++++
T Consensus 724 ~V~a-r-~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 724 LVIA-R-CAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred eEEE-e-cCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecC
Confidence 111 1 2456788777765432223456799999999999999999975
No 138
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.50 E-value=0.0077 Score=62.91 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=85.1
Q ss_pred hcCCCHHHHHHHHHHHhhh-----------------HHHhhccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcC
Q 010860 85 FSGLKIRDIELASRAVLPR-----------------FYAADVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLG 143 (499)
Q Consensus 85 l~G~~~~~l~~~~~~~~~~-----------------~~~~~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg 143 (499)
..|.-.+++++.+++.-.. ++.+.+.|...| ++|+-| ++|++||-...-...||++ -|
T Consensus 407 ~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AG 485 (681)
T COG2216 407 RGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AG 485 (681)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hC
Confidence 3477788898888877632 133445555544 789999 9999999999999999999 99
Q ss_pred CcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCCCeEE-EeCCcCcHHHHhccccCeecCCC
Q 010860 144 GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDAPDLG-IGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 144 ~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~~~~a-ygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
+|+.++ .| .-|.|.+.+++.-.+ +.-+| .||+-||.|-|..|+..++-|.-
T Consensus 486 VDdfiA-------------------ea-tPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 486 VDDFIA-------------------EA-TPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred chhhhh-------------------cC-ChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhhccc
Confidence 997765 22 568899999987543 24454 69999999999999999999974
No 139
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]
Probab=96.50 E-value=0.0015 Score=67.06 Aligned_cols=162 Identities=15% Similarity=0.140 Sum_probs=92.7
Q ss_pred cEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHh---CCccceee---eccc--ccccccccCCeeEeecC--C
Q 010860 283 GIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIAL---GRKVSCVT---YSVS--KLSRFLSPIPAIALTRD--R 352 (499)
Q Consensus 283 Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~---~~~~~~v~---~~v~--k~~~~~~~~~~i~i~R~--~ 352 (499)
|+-|+-.+..++.+.-.+-|+|+..-|.||+|-++|..++ .-+++.+. .|.+ -+.++++..|.+|..|+ +
T Consensus 132 g~yVNe~~~~~vr~~~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsFg~ 211 (685)
T KOG3730|consen 132 GFYVNEASMANVRKDMGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSFGN 211 (685)
T ss_pred ceeECHHHHHHHHHHhccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeeccCC
Confidence 5555544444332211346899999999999999988876 22222222 1222 12334555688888883 2
Q ss_pred HH-----HHHHHHHHhhCC--CEEEecCCeecCCCcccccc-hhhh-------h---cCCcEEEEEEeeccCC-------
Q 010860 353 AA-----DAARISELLQKG--DLVVCPEGTTCRENFLLRFS-ALFA-------E---MSDRIVPVAVNCKQNM------- 407 (499)
Q Consensus 353 ~~-----~~~~~~~~l~~G--~l~IFPEGTrt~~~~l~~Fk-~~~~-------~---~~~pVvPV~I~~~~~~------- 407 (499)
.+ -.+-++..+.++ .+=.|-|||||+...-+--| ++.. . -.+-||||.+.|..-+
T Consensus 212 d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~YdkILEE~LyvY 291 (685)
T KOG3730|consen 212 DELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDKILEEQLYVY 291 (685)
T ss_pred ceehHHHHHHHHHHHHhcCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHHHHHHHHHHH
Confidence 22 235667778888 49999999999776443333 3221 1 2457999999987421
Q ss_pred -cccccc-CCc--ccccccccccCCCCeEEEEEccccCCcc
Q 010860 408 -FYGTTV-RGV--KFWDPYFFFMNPRPTYEVTFLDRLPEEM 444 (499)
Q Consensus 408 -~~~~~~-~~~--~~~~~~~~~~~~~~~v~v~~l~pi~~~~ 444 (499)
+-|.+. +.+ .++...--+--..+.+.+.|++||+..+
T Consensus 292 ELLGvPKPKEST~gllKArkil~e~fGs~fl~FGePISvr~ 332 (685)
T KOG3730|consen 292 ELLGVPKPKESTKGLLKARKILDERFGSMFLDFGEPISVRE 332 (685)
T ss_pred HHhCCCCcccchhHHHHHHHHHHhhcCcEEEecCCCccHHH
Confidence 001111 111 1111100111233478999999998754
No 140
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.39 E-value=0.0057 Score=70.49 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=68.4
Q ss_pred hccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--E-EEeCeEEEecCCCcee-----eeEecCCcccchh
Q 010860 108 DVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--K-VLGTEIEVNPRTKRAT-----GFVKRPGVLVGKW 175 (499)
Q Consensus 108 ~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~-vigt~l~~~~~~g~~t-----G~~~~~~~~~g~~ 175 (499)
.++|++. +.+++.| +|+++||-....++.+|++ +|++ . +-|.+++.-+ +..+. -.+.. . +.-++
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~-~~el~~~~~~~~VfA-r-~sPe~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLS-DDELANLAERTTLFA-R-LTPMH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCC-HHHHHHHHhhCcEEE-E-cCHHH
Confidence 3455554 4789999 9999999999999999999 9995 1 2222322100 10000 01111 1 24578
Q ss_pred HHHHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecC
Q 010860 176 KKLAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 176 K~~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vn 213 (499)
|.+-++++-. ++..+ ..||+.||.|-|+.|+-.++++
T Consensus 626 K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg 663 (902)
T PRK10517 626 KERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD 663 (902)
T ss_pred HHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC
Confidence 9888887643 23444 5699999999999999999998
No 141
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.33 E-value=0.0088 Score=69.02 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=68.5
Q ss_pred hccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--EE-EeCeEEEecCCCceee-----eEecCCcccchh
Q 010860 108 DVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--KV-LGTEIEVNPRTKRATG-----FVKRPGVLVGKW 175 (499)
Q Consensus 108 ~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~v-igt~l~~~~~~g~~tG-----~~~~~~~~~g~~ 175 (499)
.+||++. +.++++| +++++||-....++.+|++ +|++ ++ -|.+++.-+ +..+.. .+.. . +.-+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~-~~el~~~v~~~~VfA-r-~sPe~ 625 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMD-DAALAREVEERTVFA-K-LTPLQ 625 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCC-HHHHHHHhhhCCEEE-E-eCHHH
Confidence 3565554 4789999 9999999999999999999 9995 22 233332100 100000 1111 1 24578
Q ss_pred HHHHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecC
Q 010860 176 KKLAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 176 K~~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vn 213 (499)
|.+-++++-. ++..+ ..||+.||.|.|+.|+-.++++
T Consensus 626 K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg 663 (903)
T PRK15122 626 KSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVD 663 (903)
T ss_pred HHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeC
Confidence 9888887643 23445 4699999999999999999998
No 142
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.23 E-value=0.0085 Score=67.92 Aligned_cols=99 Identities=13% Similarity=0.009 Sum_probs=68.2
Q ss_pred hccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE-EE-eCeEEEecCCCc----eee----------eEec
Q 010860 108 DVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK-VL-GTEIEVNPRTKR----ATG----------FVKR 167 (499)
Q Consensus 108 ~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~-vi-gt~l~~~~~~g~----~tG----------~~~~ 167 (499)
.+||++. +.+|+.| +++++||-....++.+|++ +|+++ ++ +.++. +|. .+. .+..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLL----KGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhc----CCcchhhCCHHHHHHHHHhCCEEE
Confidence 4566554 4789999 9999999999999999999 99964 22 11111 110 000 0111
Q ss_pred CCcccchhHHHHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecCC
Q 010860 168 PGVLVGKWKKLAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 168 ~~~~~g~~K~~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
. +.-++|.+-+++.-. ++..+ ..||+.||.|-|+.|+-.++++.
T Consensus 517 -r-~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~ 561 (755)
T TIGR01647 517 -E-VFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAG 561 (755)
T ss_pred -e-cCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecC
Confidence 1 255789888887643 23444 56999999999999999999973
No 143
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.18 E-value=0.014 Score=67.76 Aligned_cols=102 Identities=15% Similarity=0.047 Sum_probs=67.1
Q ss_pred hccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc----EEE-eCeEEEecCCCcee-----eeEecCCcccc
Q 010860 108 DVRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD----KVL-GTEIEVNPRTKRAT-----GFVKRPGVLVG 173 (499)
Q Consensus 108 ~i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d----~vi-gt~l~~~~~~g~~t-----G~~~~~~~~~g 173 (499)
.+++++ ++.+|++| +++++||-...-++.+|++ +|+. .++ |.++..-. +..+. -.+.. . +.-
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~-~~el~~~i~~~~Vfa-r-~sP 654 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLV-YEEMDPILPKLRVLA-R-SSP 654 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCC-HHHHHHHhccCeEEE-E-CCH
Confidence 345554 44789999 9999999999999999999 9984 122 22221000 00000 01222 1 255
Q ss_pred hhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 174 KWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 174 ~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
+.|.+-++++-.........||+.||.|+|+.|+-.++++
T Consensus 655 e~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 655 LDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecC
Confidence 7888877775432223446799999999999999999986
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.10 E-value=0.25 Score=47.35 Aligned_cols=125 Identities=9% Similarity=-0.016 Sum_probs=67.5
Q ss_pred cCCCHHHHHHHHHHHhhhHHHh-----hccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhc---CCcEEEeCeEE
Q 010860 86 SGLKIRDIELASRAVLPRFYAA-----DVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFL---GGDKVLGTEIE 153 (499)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~-----~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~l---g~d~vigt~l~ 153 (499)
.+.....++++--..+.+.+.. .++|++.+ .++++| ++.|+|.+.....+.+.+. + ++...+.
T Consensus 68 ~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~---- 142 (220)
T TIGR01691 68 KDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFS---- 142 (220)
T ss_pred cCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcc----
Confidence 3444455554444434333221 25665554 677899 9999999988777777665 4 2222111
Q ss_pred EecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CCeEEEeCCcCcHHHHhccccCeecCCCCCCCCCCc
Q 010860 154 VNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-APDLGIGDRQTDHDFMSICKEGYMVLPSKSAKPLPR 223 (499)
Q Consensus 154 ~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~~~~ 223 (499)
+.+...+...+ ..+=...+.+.+|.. ..++++||+..|+.--+.+|-..+.--.+...+++.
T Consensus 143 -----~~fd~~~g~KP---~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~ 205 (220)
T TIGR01691 143 -----GYFDTTVGLKT---EAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVD 205 (220)
T ss_pred -----eEEEeCcccCC---CHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCc
Confidence 11111000111 111223344445532 357899999999999999887654433333443444
No 145
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.08 E-value=0.017 Score=66.96 Aligned_cols=97 Identities=19% Similarity=0.134 Sum_probs=64.0
Q ss_pred ccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceee------------------eEe
Q 010860 109 VRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATG------------------FVK 166 (499)
Q Consensus 109 i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG------------------~~~ 166 (499)
+++++ ++.+|++| +++++||.....+..+|++ +|+.. .+-.+. +-.++| .+.
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~---~~~~v~--~~~~~g~~l~~~~~~~~~~~~~~~~v~ 611 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS---PDEDVT--FKSFTGREFDEMGPAKQRAACRSAVLF 611 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC---CCcccc--ceeeeHHHHhhCCHHHHHHhhhcCeEE
Confidence 45544 44789999 9999999999999999999 99842 000000 001111 121
Q ss_pred cCCcccchhHHHHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecCC
Q 010860 167 RPGVLVGKWKKLAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 167 ~~~~~~g~~K~~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
. . +.-+.|.+-++.. +.....+ +.||+.||.|||+.|+..++++.
T Consensus 612 a-r-~~P~~K~~iV~~l-q~~g~~va~iGDG~ND~~alk~AdVGia~g~ 657 (917)
T TIGR01116 612 S-R-VEPSHKSELVELL-QEQGEIVAMTGDGVNDAPALKKADIGIAMGS 657 (917)
T ss_pred E-e-cCHHHHHHHHHHH-HhcCCeEEEecCCcchHHHHHhCCeeEECCC
Confidence 1 1 1456776666643 3333444 47999999999999999999973
No 146
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.07 E-value=0.068 Score=53.47 Aligned_cols=155 Identities=11% Similarity=0.131 Sum_probs=86.2
Q ss_pred EEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHH-hCCccceeeecccccccc---c----ccCCeeEeecCCHHHH
Q 010860 285 HLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIA-LGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADA 356 (499)
Q Consensus 285 ~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~-~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~ 356 (499)
+++++|.|.+... .++|+|+++-|.+.+|....... ...++..+..-... +.+ + ...|.-.+. .+...+
T Consensus 99 ~v~~~g~e~l~~~-~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~-~~~~~~ 175 (290)
T PRK06628 99 RIEIIGIENIKKL-EGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKANN-PYVNKLVNESRAGDKLRLIP-KGPEGS 175 (290)
T ss_pred eEEEeCHHHHHHh-cCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecCCC-HHHHHHHHHHHHhcCCceec-CCCchH
Confidence 5788998876432 46799999999999999764333 22233322222211 222 1 112333342 123467
Q ss_pred HHHHHHhhCCC-EEEecCCeecCCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCccccccccc
Q 010860 357 ARISELLQKGD-LVVCPEGTTCRENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFF 424 (499)
Q Consensus 357 ~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~ 424 (499)
..+.+.+++|. +++.|.=.. .++...+|=+ ++...++||+|+.+....
T Consensus 176 r~l~k~Lk~g~~v~il~Dq~~-~~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~------------------- 235 (290)
T PRK06628 176 RALVRAIKESESIVMLVDQKM-NDGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTK------------------- 235 (290)
T ss_pred HHHHHHHHcCCeEEEEecccC-CCCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECC-------------------
Confidence 77888899997 888866443 2233345531 223379999999985431
Q ss_pred ccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHh
Q 010860 425 FMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDV 467 (499)
Q Consensus 425 ~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~ 467 (499)
...+++++.||++..... +..++..+.++++-+.+++.
T Consensus 236 ----~~~~~i~~~~~~~~~~~~-~~~~~~~~~t~~~n~~lE~~ 273 (290)
T PRK06628 236 ----GSYFKVIVHPQLKFEQTG-DNKADCYNIMLNINQMLGEW 273 (290)
T ss_pred ----CCeEEEEEcCCCCCCCCC-ChhhhHHHHHHHHHHHHHHH
Confidence 114678888888653210 12234444555554554443
No 147
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.02 E-value=0.0055 Score=60.59 Aligned_cols=51 Identities=18% Similarity=0.209 Sum_probs=37.9
Q ss_pred cchhHHHHHHHHh---CC----CCCeEEEeCCcCcHHHHhccccCeecCC-CCCCCCCC
Q 010860 172 VGKWKKLAVLKEF---GE----DAPDLGIGDRQTDHDFMSICKEGYMVLP-SKSAKPLP 222 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~----~~~~~aygDS~~D~pmL~~a~~~~~Vnp-~~~~~~~~ 222 (499)
.|..|...|+..+ |. ....+|+|||.||++||+.|+.+++++- ++.++.++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~ 242 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQ 242 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccc
Confidence 4667887777654 43 2357899999999999999999999983 33554443
No 148
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=95.96 E-value=0.022 Score=65.86 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=66.2
Q ss_pred hccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE----E-EeCeEEEecCCCcee-----eeEecCCcccc
Q 010860 108 DVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK----V-LGTEIEVNPRTKRAT-----GFVKRPGVLVG 173 (499)
Q Consensus 108 ~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~----v-igt~l~~~~~~g~~t-----G~~~~~~~~~g 173 (499)
.++|++. +.++++| +++++||-....++.+|++ +|++. + -|.+++.-+ +..+. -.+.. . +.-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~-~~~l~~~~~~~~Vfa-r-~~P 603 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMD-DQQLSQIVPKVAVFA-R-ASP 603 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCC-HHHHHHHhhcCeEEE-E-CCH
Confidence 3465554 4789999 9999999999999999999 99852 1 111111000 00000 01222 1 245
Q ss_pred hhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 174 KWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 174 ~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
+.|.+.++.+-.........||+.||.|+|+.|+-.++.+
T Consensus 604 ~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 604 EHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecC
Confidence 7787777765332223446799999999999999999885
No 149
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.89 E-value=0.03 Score=54.07 Aligned_cols=118 Identities=17% Similarity=0.154 Sum_probs=71.1
Q ss_pred hcCCCHHHHHHHHHHHhhhHHHhhccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCC
Q 010860 85 FSGLKIRDIELASRAVLPRFYAADVRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTK 159 (499)
Q Consensus 85 l~G~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g 159 (499)
=.|++.+++++.+++.- ...+.-..+.++.+++.+ .+.|.||+.-.+++.+.++ -|. -+|+++.+.+++ +|
T Consensus 72 ~~~l~k~~i~~~V~~s~--i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~-~g 147 (246)
T PF05822_consen 72 EQGLTKSEIEEAVKESD--IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDE-DG 147 (246)
T ss_dssp HHT-BGGGHHHHHHCS-----B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-T-TS
T ss_pred hcCcCHHHHHHHHHhcc--hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECC-cc
Confidence 34678888887777542 111222356667899999 9999999999999999988 574 389999999975 89
Q ss_pred ceeeeEec-CCcccchhHHHHHHHHhC---CCCCeEEEeCCcCcHHHHhcc
Q 010860 160 RATGFVKR-PGVLVGKWKKLAVLKEFG---EDAPDLGIGDRQTDHDFMSIC 206 (499)
Q Consensus 160 ~~tG~~~~-~~~~~g~~K~~~l~~~~~---~~~~~~aygDS~~D~pmL~~a 206 (499)
+++|.-.. .+++...+++..=..++. ...+.+-.|||.+|+-|-.-+
T Consensus 148 ~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 148 VLVGFKGPLIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp BEEEE-SS---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred eEeecCCCceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 98774221 012122223221112222 222466789999999997655
No 150
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.89 E-value=0.099 Score=52.37 Aligned_cols=153 Identities=14% Similarity=0.177 Sum_probs=89.0
Q ss_pred EEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHH--hCCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIA--LGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~--~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.+++.. ..++|+|+++=|.+.+|....... ...++..+..-... +.+ + ...|.-.+ .....
T Consensus 94 ~~~~~g~~~~~~-~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i--~~~~~ 169 (293)
T PRK06946 94 LVQVDSAIDLTD-PDGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTPMSN-PLLDAIAKAARGRFGAEMV--SRADS 169 (293)
T ss_pred eEEEECHHHHHh-cCCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeCCCC-HHHHHHHHHHHHhcCCCcc--CCCch
Confidence 578888877543 246899999999999999875432 12333222222211 222 1 11243334 22345
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+..+.+.|++|. +++-|.=..+ +++...+|=+ ++...++||+|+.+.-...
T Consensus 170 ~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~~---------------- 233 (293)
T PRK06946 170 ARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLPD---------------- 233 (293)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeCC----------------
Confidence 778888899997 7777665433 3334456641 2233789999997743210
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
...+++++.||++.. ..++.++.++++-+.+++..
T Consensus 234 ------~~~~~~~~~~~~~~~-----~~~~~~~~t~~~n~~lE~~I 268 (293)
T PRK06946 234 ------YKGYRLRVFKPWENY-----PTGDDDLDARRMNAFLEEQI 268 (293)
T ss_pred ------CCeEEEEEeCCCcCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 113667788888753 23555666666666666554
No 151
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.85 E-value=0.073 Score=53.74 Aligned_cols=157 Identities=11% Similarity=0.087 Sum_probs=88.1
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.|.+... ..++++|+++-|.+.+|........ +.++..+..-... +.+ + ...|.-.+.. +...
T Consensus 116 ~~~~~g~e~l~~a~a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~~n-~~~d~~i~~~R~~~g~~~i~~-~~~~ 193 (308)
T PRK06553 116 RVEVRGIEIFERLRDDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPPNN-PYAARKVLEARRTTMGGLVPS-GAGA 193 (308)
T ss_pred eeEecCHHHHHHHHhcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecCCC-hHHHHHHHHHHHHcCCCcccC-CChH
Confidence 5678888765321 1367999999999999998655433 2343333222221 222 1 1113222321 2345
Q ss_pred HHHHHHHhhCCC-EEEecCCeecCCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCcccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTCRENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYF 423 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~ 423 (499)
+..+.+.+++|. +++.|.-.-+ ++...+|=+ ++...++||+|+.+....
T Consensus 194 ~r~l~r~Lk~g~~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~------------------ 254 (308)
T PRK06553 194 AFALAGVLERGGHVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP------------------ 254 (308)
T ss_pred HHHHHHHHHcCCeEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC------------------
Confidence 777888899996 8888654432 233345531 223378999999985331
Q ss_pred cccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 424 FFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 424 ~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
.+.+++++.||++.... .+..++.++.++++-+.+++..
T Consensus 255 -----~g~y~i~~~~~~~~~~~-~~~~~d~~~~t~~~n~~lE~~I 293 (308)
T PRK06553 255 -----GGRFRLELTERVELPRD-ADGQIDVQATMQALTDVVEGWV 293 (308)
T ss_pred -----CCeEEEEEecCCCCCCC-CCccccHHHHHHHHHHHHHHHH
Confidence 12477888888875321 0112355556665555555543
No 152
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.77 E-value=0.023 Score=61.19 Aligned_cols=60 Identities=12% Similarity=0.036 Sum_probs=38.3
Q ss_pred cCCeeEeecCCHH----HHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhhhcCCcEEEEEEee
Q 010860 342 PIPAIALTRDRAA----DAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNC 403 (499)
Q Consensus 342 ~~~~i~i~R~~~~----~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~ 403 (499)
..|.+.|++|.-. ....+++.|++|. ++| +.|-.....-.+|..++.+.++|+.=+.+..
T Consensus 392 ~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~~~~R~~~i~lAk~~gv~v~~i~~~~ 456 (526)
T TIGR01663 392 PAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPDAASRAKFLQCARAAGIPCRCFLFNA 456 (526)
T ss_pred HcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCCHHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 3467777775432 3345677888994 777 6555444445667777777888877555543
No 153
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.69 E-value=0.026 Score=55.53 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=32.6
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecC
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
.|..|...++..+ |.. ..++++|||.||++|++.|+.++++.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg 241 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG 241 (272)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec
Confidence 4556887777654 422 24789999999999999999999885
No 154
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.43 E-value=0.06 Score=59.25 Aligned_cols=49 Identities=18% Similarity=0.215 Sum_probs=36.4
Q ss_pred chhHHHHHHHH---hCCC-CCeEEE--eCCcCcHHHHhccccCeecC-CCCCCCCC
Q 010860 173 GKWKKLAVLKE---FGED-APDLGI--GDRQTDHDFMSICKEGYMVL-PSKSAKPL 221 (499)
Q Consensus 173 g~~K~~~l~~~---~~~~-~~~~ay--gDS~~D~pmL~~a~~~~~Vn-p~~~~~~~ 221 (499)
|-.|..+++.. ++.. ....++ |||.||++||+.|+.++++. |+.+|..+
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~~~~~l 666 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGNKWHKM 666 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCCCCCcc
Confidence 44566666554 4432 244566 99999999999999999996 67788766
No 155
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.43 E-value=0.018 Score=54.96 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=30.1
Q ss_pred chhHHHHHHH---HhCC-CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 173 GKWKKLAVLK---EFGE-DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 173 g~~K~~~l~~---~~~~-~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
|..|...++. .+|. ....+++|||.||++||+.|+.+++|
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 3345555554 4453 33578999999999999999999987
No 156
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.40 E-value=0.089 Score=51.84 Aligned_cols=73 Identities=14% Similarity=0.006 Sum_probs=40.0
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHH---HHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCC
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVE---PFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDA 188 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~---~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~ 188 (499)
.++.++++| .+++||+..+...+ ...+. +|++.+--..+... ++ +..|..+.+.....-.
T Consensus 126 ~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr--~~-------------~~~K~~rr~~I~~~y~ 189 (266)
T TIGR01533 126 FLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLK--KD-------------KSSKESRRQKVQKDYE 189 (266)
T ss_pred HHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeC--CC-------------CCCcHHHHHHHHhcCC
Confidence 344678899 99999998754443 55566 78753221122222 10 1224344433322211
Q ss_pred CeEEEeCCcCcHH
Q 010860 189 PDLGIGDRQTDHD 201 (499)
Q Consensus 189 ~~~aygDS~~D~p 201 (499)
....+||+.+|+.
T Consensus 190 Ivl~vGD~~~Df~ 202 (266)
T TIGR01533 190 IVLLFGDNLLDFD 202 (266)
T ss_pred EEEEECCCHHHhh
Confidence 2456799999984
No 157
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=95.36 E-value=0.39 Score=45.99 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=69.7
Q ss_pred cCCCHHHHHHHHHHHhhhHHHh-hccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcC-----CcE-EEeCeEEE
Q 010860 86 SGLKIRDIELASRAVLPRFYAA-DVRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLG-----GDK-VLGTEIEV 154 (499)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~-~i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg-----~d~-vigt~l~~ 154 (499)
--++.+|+...-++-..+.+.. ..-|.+.+ .++.+| .+-++|.|.+..++--... ++ +++ |+|+.-++
T Consensus 69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v 147 (222)
T KOG2914|consen 69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEV 147 (222)
T ss_pred CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccc
Confidence 3456666654444333333221 13344444 467889 9999999977766655554 33 333 33455555
Q ss_pred ecCCCceeeeEecCCcccchhHHHHHHHHhCCC--CCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 155 NPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED--APDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 155 ~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~--~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
+ +|+.. + .+=-+ -.+.+|.. ..++.+.||.+=+..-..|+..++..|+.
T Consensus 148 ~--~gKP~------P--di~l~---A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~ 198 (222)
T KOG2914|consen 148 K--NGKPD------P--DIYLK---AAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATP 198 (222)
T ss_pred c--CCCCC------c--hHHHH---HHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCC
Confidence 5 45311 0 11111 22234532 35789999999999999999999999984
No 158
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.36 E-value=0.016 Score=67.08 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=66.4
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--E---EE--eCeEEEecCCCceeee-----EecCCcccchhHH
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--K---VL--GTEIEVNPRTKRATGF-----VKRPGVLVGKWKK 177 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~---vi--gt~l~~~~~~g~~tG~-----~~~~~~~~g~~K~ 177 (499)
+++++.++++| +++++||-....+..||++ +|+. . ++ |.++..-. +..+.-. +... +.-++|.
T Consensus 553 ~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~-~~el~~~~~~~~VfAR--vsP~qK~ 628 (917)
T COG0474 553 KEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALS-DEELAELVEELSVFAR--VSPEQKA 628 (917)
T ss_pred HHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcC-HHHHHHHhhhCcEEEE--cCHHHHH
Confidence 34556899999 9999999999999999999 9962 1 12 44433210 1111000 1111 1457888
Q ss_pred HHHHHHhCCCCCeE-EEeCCcCcHHHHhccccCeecCC
Q 010860 178 LAVLKEFGEDAPDL-GIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 178 ~~l~~~~~~~~~~~-aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
+-++.+-.. +..+ .-||+.||.|+|+.|+-.++..-
T Consensus 629 ~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 629 RIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 777766543 3444 56999999999999999995553
No 159
>PRK10976 putative hydrolase; Provisional
Probab=95.35 E-value=0.0093 Score=58.62 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=35.6
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
.|-.|...|+..+ |.. ...+|+|||.||++||+.|+.++++.-..
T Consensus 187 ~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~ 235 (266)
T PRK10976 187 GGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAH 235 (266)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCc
Confidence 4667888887664 422 35789999999999999999999987543
No 160
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.32 E-value=0.0087 Score=58.95 Aligned_cols=44 Identities=18% Similarity=0.142 Sum_probs=35.4
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
.|-.|...|+..+ |.. ...+|+|||.||++||+.|+.++++.-.
T Consensus 193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA 240 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA 240 (270)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc
Confidence 5667888887765 422 3578999999999999999999999754
No 161
>PLN02811 hydrolase
Probab=95.30 E-value=0.26 Score=46.93 Aligned_cols=92 Identities=10% Similarity=-0.013 Sum_probs=50.8
Q ss_pred ccHHHH---HHHHhCC-CEEEEeCCcHH-HHHHHHhhhcC----CcEEEeCeEEEecCCCceeeeEecCCcccchhHHHH
Q 010860 109 VRKESY---EVFDKCE-RKVVVTANPTL-MVEPFVKDFLG----GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLA 179 (499)
Q Consensus 109 i~~~~~---~~~~~~G-~vvlvSas~~~-~v~~ia~~~lg----~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~ 179 (499)
++|.+. +.++++| ++.|+|++... +...+.+. .+ ++.+++.+ .. ..-.++ + .++-...
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~-~~----~~~~~K----P---~p~~~~~ 145 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGD-DP----EVKQGK----P---APDIFLA 145 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECC-hh----hccCCC----C---CcHHHHH
Confidence 455544 4678899 99999998764 33333332 33 24455433 00 000010 1 1112223
Q ss_pred HHHHhC---CC-CCeEEEeCCcCcHHHHhccccCeecC
Q 010860 180 VLKEFG---ED-APDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 180 l~~~~~---~~-~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
..+.++ .. ..++.+|||..|+..-+.+|-+++--
T Consensus 146 a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 146 AARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred HHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 333343 22 35788999999999999988765544
No 162
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.29 E-value=0.13 Score=50.51 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=40.4
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE-EEeCeEE-EecCCCceeeeEecCCcccchhHHHHHHHHhC
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK-VLGTEIE-VNPRTKRATGFVKRPGVLVGKWKKLAVLKEFG 185 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~-vigt~l~-~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~ 185 (499)
+.++++| +++++||=+...+.++++. +|++. +||..=. +. + .-+|++....+ ...+-+..+.+.+.
T Consensus 30 ~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~--d-~~~~~~l~~~~-l~~~~~~~i~~~~~ 98 (272)
T PRK10530 30 ARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTPAICCNGTYLY--D-YQAKKVLEADP-LPVQQALQVIEMLD 98 (272)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCCEEEcCCcEEE--e-cCCCEEEEecC-CCHHHHHHHHHHHH
Confidence 3467789 9999999999999999999 99873 4443311 11 0 01344433222 44455566666554
No 163
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.25 E-value=0.047 Score=58.98 Aligned_cols=83 Identities=16% Similarity=0.138 Sum_probs=64.8
Q ss_pred hhccHHHH---HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH
Q 010860 107 ADVRKESY---EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK 182 (499)
Q Consensus 107 ~~i~~~~~---~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~ 182 (499)
+.+++++. ++++++| +++++||-...-++.+|++ +|+ .- . +..+.|.+-+++
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi---------~~-------------~-~~p~~K~~~v~~ 401 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI---------FA-------------R-VTPEEKAALVEA 401 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc---------ee-------------c-cCHHHHHHHHHH
Confidence 34566554 4788899 9999999999999999999 886 11 1 256789888887
Q ss_pred HhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 183 EFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 183 ~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
...........||+.||.|+|+.|+-.++++
T Consensus 402 l~~~g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 402 LQKKGRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HHHCCCEEEEECCChhhHHHHHhCCCccccc
Confidence 6433224567899999999999999998886
No 164
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=95.22 E-value=0.2 Score=50.64 Aligned_cols=154 Identities=10% Similarity=0.127 Sum_probs=89.6
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.|.+... ..++++|+++=|...+|........ +.++..+..-... +.+ + ...|.-.+. ....
T Consensus 114 ~~~~~g~e~l~~a~~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~--~~~~ 190 (314)
T PRK08943 114 RVEWHGLEILEEARANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQRN-PLFDWLWNRVRRRFGGRLHA--REDG 190 (314)
T ss_pred eEEEECHHHHHHHHhCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCCCC-HHHHHHHHHHHhhcCCeeec--Cchh
Confidence 6788898865311 2367999999999999986544332 3343333322221 222 1 112323332 3455
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+..+.+.|++|. +++-|.-..+ +++...+|=+ ++...++||+|+.+.-..
T Consensus 191 ~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~----------------- 253 (314)
T PRK08943 191 IKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNG----------------- 253 (314)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeC-----------------
Confidence 778889999997 8787765543 2333446531 122379999999984221
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
....+++++.||++.. ..+|..+.++++-+.+++..
T Consensus 254 -----~~~~~~i~~~~~~~~~-----~~~d~~~~t~~~~~~lE~~I 289 (314)
T PRK08943 254 -----KTHRLDIEIRPPMDDL-----LSADDETIARRMNEEVEQFV 289 (314)
T ss_pred -----CCCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 0114678888887643 23566666766666666554
No 165
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=95.20 E-value=0.28 Score=49.47 Aligned_cols=154 Identities=16% Similarity=0.187 Sum_probs=89.7
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
+++++|.|.+... ..++|+|+++=|...+|........ ..++..+..-... +.+ + ...|.-.+. ....
T Consensus 105 ~~~i~g~e~l~~~~~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~~n-~~~d~~~~~~R~~~g~~~i~--~~~~ 181 (305)
T TIGR02208 105 RVNLMGLEHIEAAQAAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNHKN-PLFDWLWNRVRSRFGGHVYA--REAG 181 (305)
T ss_pred ceEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCCCC-HHHHHHHHHHHhcCCCceec--Chhh
Confidence 5788898765321 2367999999999999976544332 2343333222221 222 1 112322332 2356
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
+..+.+.|++|. +++-+.=..+ +++...+|=+ ++...++||+|+.+.-..
T Consensus 182 ~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~----------------- 244 (305)
T TIGR02208 182 IKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQ----------------- 244 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEEC-----------------
Confidence 778889999997 7777654433 3334446531 122378999999975321
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
....+++++.||++.. ..++..+.++++-+.+++..
T Consensus 245 -----~~~~~~i~~~~~~~~~-----~~~~~~~~t~~~n~~lE~~I 280 (305)
T TIGR02208 245 -----VTGKFELTVRPAMATE-----LSVDPEQEARAMNKEVEQFI 280 (305)
T ss_pred -----CCCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 0113677787877653 23567777777666666654
No 166
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.19 E-value=0.17 Score=51.14 Aligned_cols=156 Identities=17% Similarity=0.157 Sum_probs=91.0
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADA 356 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~ 356 (499)
+++++|.|.+... ..++|+|+++=|...+|..........++..+..-... +.+ + ...|...+.+ ..+
T Consensus 109 ~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~~---~~~ 184 (309)
T PRK06860 109 WTEVEGLEHIREVQAQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRPNDN-PLYDWLQTWGRLRSNKSMLDR---KDL 184 (309)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCC-HHHHHHHHHHHhhcCCcCcCc---ccH
Confidence 6788998875321 23689999999999999976544432243222222111 222 1 1123333422 236
Q ss_pred HHHHHHhhCCC-EEEecCCeec-CCCcccccch------------hhhhcCCcEEEEEEeeccCCccccccCCccccccc
Q 010860 357 ARISELLQKGD-LVVCPEGTTC-RENFLLRFSA------------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPY 422 (499)
Q Consensus 357 ~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~------------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~ 422 (499)
..+.+.|++|. +++-|.-.-. .++...+|=+ ++...++||+|+.+.....
T Consensus 185 r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~~---------------- 248 (309)
T PRK06860 185 KGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKPD---------------- 248 (309)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeCC----------------
Confidence 77888999997 7777654432 2233345431 1223689999999854320
Q ss_pred ccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCc
Q 010860 423 FFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFE 471 (499)
Q Consensus 423 ~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~ 471 (499)
...+++++.||++.. ..++..+.++.+.+.+++....-
T Consensus 249 ------~~~~~i~~~~~~~~~-----~~~d~~~~t~~~n~~lE~~Ir~~ 286 (309)
T PRK06860 249 ------GKGYELIILPPEDSP-----PLDDAEATAAWMNKVVEKCILMA 286 (309)
T ss_pred ------CCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 114778888887753 23577777777777776665433
No 167
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.11 E-value=0.022 Score=55.71 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=30.3
Q ss_pred HHHHHHhCC---CCCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 178 LAVLKEFGE---DAPDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 178 ~~l~~~~~~---~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
+.+.+.++. ....+++|||.||++||+.++.+++++-..
T Consensus 182 ~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~ 223 (256)
T TIGR01486 182 NALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPN 223 (256)
T ss_pred HHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCC
Confidence 445555553 335789999999999999999999987653
No 168
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.10 E-value=0.053 Score=51.46 Aligned_cols=78 Identities=21% Similarity=0.127 Sum_probs=48.7
Q ss_pred CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh---CCC-CCeEEEeCCc
Q 010860 122 RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF---GED-APDLGIGDRQ 197 (499)
Q Consensus 122 ~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~---~~~-~~~~aygDS~ 197 (499)
.++++++.....++.+.+. .|+..+.+ +.. -.+.. .|..|...++..+ |.. ...+++|||.
T Consensus 109 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~---------~~~-~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKE-RGLNLVDS---------GFA-IHIMK----KGVDKGVGVEKLKELLGIKPEEVAAIGDSE 173 (215)
T ss_pred EEEecCCccHHHHHHHHHh-CCeEEEec---------Cce-EEEec----CCCChHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 4445566555566666666 66543221 111 12222 3556776666554 422 2478999999
Q ss_pred CcHHHHhccccCeecCC
Q 010860 198 TDHDFMSICKEGYMVLP 214 (499)
Q Consensus 198 ~D~pmL~~a~~~~~Vnp 214 (499)
||++||+.++.++++.-
T Consensus 174 ND~~ml~~ag~~vam~n 190 (215)
T TIGR01487 174 NDIDLFRVVGFKVAVAN 190 (215)
T ss_pred HHHHHHHhCCCeEEcCC
Confidence 99999999999999864
No 169
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.09 E-value=0.065 Score=52.92 Aligned_cols=33 Identities=9% Similarity=0.267 Sum_probs=27.6
Q ss_pred HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc--EEEe
Q 010860 116 VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD--KVLG 149 (499)
Q Consensus 116 ~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d--~vig 149 (499)
.++++| +++++||=+...+++++++ +|++ .+||
T Consensus 35 ~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~~~~~I~ 70 (271)
T PRK03669 35 RLREAQVPVILCSSKTAAEMLPLQQT-LGLQGLPLIA 70 (271)
T ss_pred HHHHcCCeEEEEcCCCHHHHHHHHHH-hCCCCCcEEE
Confidence 456779 9999999999999999999 9985 3554
No 170
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.05 E-value=0.31 Score=49.23 Aligned_cols=153 Identities=13% Similarity=0.144 Sum_probs=84.9
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCC--eeEeecCCHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIP--AIALTRDRAA 354 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~--~i~i~R~~~~ 354 (499)
+++++|.|.+... ..++++|+++=|...+|..........++..+..-... +.+ + ...| .+.+ .+.
T Consensus 106 ~~~~~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~~---~~~ 181 (310)
T PRK05646 106 LAHIEGLEHLQQAQQEGQGVILMALHFTTLEIGAALLGQQHTIDGMYREHKN-PVFDFIQRRGRERHNLDSTAI---ERE 181 (310)
T ss_pred eEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCC-HHHHHHHHHHhhccCCCcccc---cHh
Confidence 5788888865321 23679999999999999976443332232222211111 211 1 1112 2322 223
Q ss_pred HHHHHHHHhhCCC-EEEecCCeecCC-Ccccccch-------h----hhhcCCcEEEEEEeeccCCccccccCCcccccc
Q 010860 355 DAARISELLQKGD-LVVCPEGTTCRE-NFLLRFSA-------L----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDP 421 (499)
Q Consensus 355 ~~~~~~~~l~~G~-l~IFPEGTrt~~-~~l~~Fk~-------~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~ 421 (499)
.+..+.+.|++|. +++-+.=..+.+ +...+|=+ + +...++||+|+.+.....
T Consensus 182 ~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~~--------------- 246 (310)
T PRK05646 182 DVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLAD--------------- 246 (310)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeCC---------------
Confidence 5667778889997 777765443322 33446531 1 223689999999854320
Q ss_pred cccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 422 YFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 422 ~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
...+++++.||++.. ..++.++.++++-+.+++..
T Consensus 247 -------g~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~lE~~I 281 (310)
T PRK05646 247 -------GSGYRLVIHPPLEDF-----PGESEEADCLRINQWVERVV 281 (310)
T ss_pred -------CCeEEEEEeCCCcCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 114678888888653 23455555555555555543
No 171
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.04 E-value=0.36 Score=48.67 Aligned_cols=155 Identities=8% Similarity=0.077 Sum_probs=88.7
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADA 356 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~ 356 (499)
.++++|.|++... ..++++|+++=|...+|..........++..+..-... +.+ + ...|.-.+. +....+
T Consensus 96 ~~~~~g~e~l~~~~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~-~~~~~~ 173 (305)
T PRK08734 96 LRQRHGQELYDAALASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRPPES-EAVDGFLQLVRGGDNVRQVR-AEGPAV 173 (305)
T ss_pred eEEecCHHHHHHHHHcCCCEEEEccccchHHHHHHHHHccCCceEEEeCCCC-HHHHHHHHHHhccCCCeeec-CCchhH
Confidence 3578888875321 23679999999999999976544332343333222211 222 1 122434442 223567
Q ss_pred HHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCcccccccc
Q 010860 357 ARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYF 423 (499)
Q Consensus 357 ~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~ 423 (499)
..+.+.|++|. +++-|.=.-. +++...+|=+ ++...++||+|+.+.-..
T Consensus 174 r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~~------------------ 235 (305)
T PRK08734 174 RQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERIG------------------ 235 (305)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEcC------------------
Confidence 78889999997 7777665432 2233445531 122378999999884331
Q ss_pred cccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 424 FFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 424 ~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
....+++++.||++.. ..++..+.++++-+.+++..
T Consensus 236 ----~~~~y~~~~~~~~~~~-----~~~~~~~~~~~~n~~lE~~I 271 (305)
T PRK08734 236 ----PDLEFALHVQPADPAV-----ADPDPLRAATALNAGIERIA 271 (305)
T ss_pred ----CCCcEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 0113677777776542 23566666666666665554
No 172
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.96 E-value=0.013 Score=57.53 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=38.1
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCCC-CCCCCCCc
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLPS-KSAKPLPR 223 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~-~~~~~~~~ 223 (499)
.|..|...++... |.. ...+|+|||.||++||+.|+.++++.-. +.+..++.
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 5677887776554 432 2478999999999999999999998764 44444443
No 173
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.92 E-value=0.017 Score=55.33 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=34.4
Q ss_pred cchhHHHHHHHHh---CC-CCCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 172 VGKWKKLAVLKEF---GE-DAPDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~-~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
.+..|...++..+ |. ....+++|||.||++||+.++.++++....
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~ 231 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNAT 231 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCC
Confidence 3556777776654 42 235789999999999999999999998653
No 174
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=94.92 E-value=0.12 Score=50.74 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
+.++++| +++++||=+-.-+.+++++ +|++
T Consensus 30 ~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~ 60 (270)
T PRK10513 30 AAARAKGVNVVLTTGRPYAGVHRYLKE-LHME 60 (270)
T ss_pred HHHHHCCCEEEEecCCChHHHHHHHHH-hCCC
Confidence 3467789 9999999999999999999 9975
No 175
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.91 E-value=0.012 Score=58.00 Aligned_cols=44 Identities=23% Similarity=0.300 Sum_probs=35.3
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCCC
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLPS 215 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~ 215 (499)
.|-.|...|+..+ |.. ...+|+|||.||++||+.|+.++++.-.
T Consensus 185 ~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na 232 (272)
T PRK15126 185 VGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA 232 (272)
T ss_pred CCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC
Confidence 4667888877664 422 2578999999999999999999999864
No 176
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.91 E-value=0.23 Score=49.61 Aligned_cols=153 Identities=9% Similarity=0.107 Sum_probs=86.6
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCe-eEeecCCHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPA-IALTRDRAAD 355 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~-i~i~R~~~~~ 355 (499)
.++++|.|++... ..++++|+++=|.+.+|..........+...+...... +.+ + ...|. ..+. ....
T Consensus 89 ~~~~~~~e~l~~~~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~~~n-~~~d~~~~~~R~~~g~~~i~~--~~~~ 165 (289)
T PRK08706 89 LVRYRNKHYLDDALAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKN-KILDEQILKGRNRYHNVFLIG--RTEG 165 (289)
T ss_pred ceEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeCCCC-HHHHHHHHHHHhccCCccccc--Chhh
Confidence 3788898865321 13689999999999999976544332343222222211 222 1 11232 2222 2346
Q ss_pred HHHHHHHh-hCCC-EEEecCCeec-CCCcccccch-------h----hhhcCCcEEEEEEeeccCCccccccCCcccccc
Q 010860 356 AARISELL-QKGD-LVVCPEGTTC-RENFLLRFSA-------L----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDP 421 (499)
Q Consensus 356 ~~~~~~~l-~~G~-l~IFPEGTrt-~~~~l~~Fk~-------~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~ 421 (499)
+..+.+.| ++|. +++.+.=.-. +++...+|=+ + +...++||+|+.+.-..
T Consensus 166 ~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~---------------- 229 (289)
T PRK08706 166 LRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREA---------------- 229 (289)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcC----------------
Confidence 77788888 4665 5666554332 2233446531 1 22378999999985431
Q ss_pred cccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 422 YFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 422 ~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
.+.+++++.||+... ..++..+.++++-+.+++..
T Consensus 230 -------~~~~~i~i~~~~~~~-----~~~~~~~~t~~~~~~lE~~I 264 (289)
T PRK08706 230 -------DNTVTLHFYPAWDSF-----PSEDAQADAQRMNRFIEERV 264 (289)
T ss_pred -------CCcEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 113667777777652 23566777777776666654
No 177
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=94.90 E-value=0.021 Score=54.95 Aligned_cols=41 Identities=20% Similarity=0.341 Sum_probs=31.3
Q ss_pred chhHHHHHHHHh---CC---CCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 173 GKWKKLAVLKEF---GE---DAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 173 g~~K~~~l~~~~---~~---~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
|..|..+++.++ +. ...++++|||.||++||+.|+.+++|.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 556776666553 21 224789999999999999999999984
No 178
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.82 E-value=0.077 Score=52.35 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=28.2
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEeC
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLGT 150 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vigt 150 (499)
+.++++| +++++||=+-..++++.++ +|++ .+||.
T Consensus 29 ~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~ 65 (272)
T PRK15126 29 ARLRERDITLTFATGRHVLEMQHILGA-LSLDAYLITG 65 (272)
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCcEEec
Confidence 3456789 9999999999999999999 9986 44543
No 179
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=94.81 E-value=0.08 Score=50.63 Aligned_cols=17 Identities=35% Similarity=0.479 Sum_probs=14.3
Q ss_pred CeEEEEecCCceeecCC
Q 010860 20 YGSIAADLDGTLLVSRS 36 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s 36 (499)
.++.+||+||||++.+.
T Consensus 3 ~kli~~DlDGTLl~~~~ 19 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR 19 (230)
T ss_pred eeEEEEecCCCcCCCCC
Confidence 48999999999998543
No 180
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.72 E-value=0.085 Score=61.77 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=63.2
Q ss_pred ccHHH---HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-E-E---------EeCeEEE---ec-CCCceeee-----
Q 010860 109 VRKES---YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-K-V---------LGTEIEV---NP-RTKRATGF----- 164 (499)
Q Consensus 109 i~~~~---~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~-v---------igt~l~~---~~-~~g~~tG~----- 164 (499)
+++++ ++.++++| +++++||-...-+..+|++ +|+- . - +....+. .+ .+-.+||.
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 45554 45788999 9999999999999999999 9972 1 0 0000000 00 00122322
Q ss_pred ---------------EecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcHHHHhccccCeecC
Q 010860 165 ---------------VKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 165 ---------------~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
+-. - +.-+.|.+-++.+-.......+.||+.||.|||+.|+..++++
T Consensus 648 ~~~el~~~~~~~~~~Vfa-R-~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg 709 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFA-R-TSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709 (997)
T ss_pred CHHHHHHHHHhcCCEEEE-E-CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecC
Confidence 111 0 1345676666654322223456899999999999999999986
No 181
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.64 E-value=0.076 Score=49.91 Aligned_cols=84 Identities=15% Similarity=0.266 Sum_probs=55.6
Q ss_pred CEEEEeCCcHH----HHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHH-HHHHh---CCCCCeEEE
Q 010860 122 RKVVVTANPTL----MVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLA-VLKEF---GEDAPDLGI 193 (499)
Q Consensus 122 ~vvlvSas~~~----~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~-l~~~~---~~~~~~~ay 193 (499)
...|++=|-+. +...+ .+ .|+..+.|++.-.. .+ + +.|.+|+.. +-+.+ +.-..+++.
T Consensus 150 seti~~rs~d~~~~~~~~~L-~e-~glt~v~garf~~v----------~~-a-s~gKg~Aa~~ll~~y~rl~~~r~t~~~ 215 (274)
T COG3769 150 SETIIWRSSDERMAQFTARL-NE-RGLTFVHGARFWHV----------LD-A-SAGKGQAANWLLETYRRLGGARTTLGL 215 (274)
T ss_pred hhheeecccchHHHHHHHHH-Hh-cCceEEeccceEEE----------ec-c-ccCccHHHHHHHHHHHhcCceeEEEec
Confidence 55566666665 33333 44 78888888887654 22 2 366666643 22322 211136889
Q ss_pred eCCcCcHHHHhccccCeecC-CCCCCC
Q 010860 194 GDRQTDHDFMSICKEGYMVL-PSKSAK 219 (499)
Q Consensus 194 gDS~~D~pmL~~a~~~~~Vn-p~~~~~ 219 (499)
|||.||.||++.++.++.|. -+++|.
T Consensus 216 GDg~nD~Pl~ev~d~AfiV~~lnre~~ 242 (274)
T COG3769 216 GDGPNDAPLLEVMDYAFIVKGLNREGV 242 (274)
T ss_pred CCCCCcccHHHhhhhheeecccchhhh
Confidence 99999999999999999998 566664
No 182
>PRK10976 putative hydrolase; Provisional
Probab=94.55 E-value=0.1 Score=51.16 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=40.1
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEeCeEE-EecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLGTEIE-VNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vigt~l~-~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
+.++++| +++++||=+...++++.+. +|++ .+||..=. +. + .+|++..... .-.+-+..+.+.+
T Consensus 29 ~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~--~--~~~~~i~~~~-l~~~~~~~i~~~~ 95 (266)
T PRK10976 29 KLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSYMITSNGARVH--D--TDGNLIFSHN-LDRDIASDLFGVV 95 (266)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCeEEEcCCcEEE--C--CCCCEehhhc-CCHHHHHHHHHhh
Confidence 3467789 9999999998889999999 9987 45553322 11 1 1344332222 4455566666555
No 183
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=94.53 E-value=0.2 Score=43.28 Aligned_cols=80 Identities=8% Similarity=-0.022 Sum_probs=56.9
Q ss_pred CCEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCCCeEEEeCCcCcH
Q 010860 121 ERKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDAPDLGIGDRQTDH 200 (499)
Q Consensus 121 G~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~~~~aygDS~~D~ 200 (499)
=+|+|+||----.++.+|+. .|++ .+.. ..+ . ..+.|.+-+++.-+..+.+++.||..||.
T Consensus 46 V~i~IASgDr~gsl~~lae~-~gi~------~~rv---------~a~--a-~~e~K~~ii~eLkk~~~k~vmVGnGaND~ 106 (152)
T COG4087 46 VDIYIASGDRKGSLVQLAEF-VGIP------VERV---------FAG--A-DPEMKAKIIRELKKRYEKVVMVGNGANDI 106 (152)
T ss_pred heEEEecCCcchHHHHHHHH-cCCc------eeee---------ecc--c-CHHHHHHHHHHhcCCCcEEEEecCCcchH
Confidence 37889999888888888887 7754 1111 111 2 45778888887655434678999999999
Q ss_pred HHHhccccCeecCC-CCCCC
Q 010860 201 DFMSICKEGYMVLP-SKSAK 219 (499)
Q Consensus 201 pmL~~a~~~~~Vnp-~~~~~ 219 (499)
++|+.|+-.+++-- ...|+
T Consensus 107 laLr~ADlGI~tiq~e~v~~ 126 (152)
T COG4087 107 LALREADLGICTIQQEGVPE 126 (152)
T ss_pred HHhhhcccceEEeccCCcch
Confidence 99999999977654 44444
No 184
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=94.53 E-value=0.13 Score=48.90 Aligned_cols=79 Identities=23% Similarity=0.157 Sum_probs=48.4
Q ss_pred EEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh---CCC-CCeEEEeCCcCc
Q 010860 124 VVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF---GED-APDLGIGDRQTD 199 (499)
Q Consensus 124 vlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~---~~~-~~~~aygDS~~D 199 (499)
.+.+......++.+.++ ++.+..+. . .+. .-.+.. .|..|...|+..+ |.. ...+++|||.||
T Consensus 111 ~~~~~~~~~~~~~~~~~-~~~~~~~~-----~--~~~-~~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~ND 177 (225)
T TIGR01482 111 KMRYGIDVDTVREIIKE-LGLNLVAV-----D--SGF-DIHILP----QGVNKGVAVKKLKEKLGIKPGETLVCGDSEND 177 (225)
T ss_pred EEeecCCHHHHHHHHHh-cCceEEEe-----c--CCc-EEEEee----CCCCHHHHHHHHHHHhCCCHHHEEEECCCHhh
Confidence 34444444456667777 76542111 1 121 223333 3456777666544 422 247899999999
Q ss_pred HHHHhccccCeecCCC
Q 010860 200 HDFMSICKEGYMVLPS 215 (499)
Q Consensus 200 ~pmL~~a~~~~~Vnp~ 215 (499)
++||+.++.++++.-.
T Consensus 178 i~m~~~ag~~vam~Na 193 (225)
T TIGR01482 178 IDLFEVPGFGVAVANA 193 (225)
T ss_pred HHHHHhcCceEEcCCh
Confidence 9999999999998753
No 185
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.15 E-value=0.29 Score=44.23 Aligned_cols=100 Identities=18% Similarity=0.139 Sum_probs=58.8
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHH---HHHhhh--cC--Cc--EEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH-
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVE---PFVKDF--LG--GD--KVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL- 181 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~---~ia~~~--lg--~d--~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~- 181 (499)
+++.++++| +++++||.+...++ ++.+.+ .| +. .++++.-... .-+++++... . ..+-|...++
T Consensus 35 a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~---~~~~~e~i~~-~-~~~~K~~~l~~ 109 (157)
T smart00775 35 LYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLF---AALHREVISK-K-PEVFKIACLRD 109 (157)
T ss_pred HHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcch---hhhhcccccC-C-HHHHHHHHHHH
Confidence 445678899 99999999988874 666551 12 32 3443331110 0023344331 1 1223555555
Q ss_pred --HHhCC-CCCe-EEEeCCcCcHHHHhccccC----eecCCCCC
Q 010860 182 --KEFGE-DAPD-LGIGDRQTDHDFMSICKEG----YMVLPSKS 217 (499)
Q Consensus 182 --~~~~~-~~~~-~aygDS~~D~pmL~~a~~~----~~Vnp~~~ 217 (499)
+++.. ..+. .+|||..+|....+.++-+ +.|||+.+
T Consensus 110 i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~ 153 (157)
T smart00775 110 IKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGE 153 (157)
T ss_pred HHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCc
Confidence 44432 2233 4699999999999999865 78888764
No 186
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.14 E-value=0.35 Score=48.72 Aligned_cols=151 Identities=15% Similarity=0.142 Sum_probs=86.0
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADA 356 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~ 356 (499)
+++++|.|.+... ..++++|+++=|...+|..........++..+..-... +.+ + ...|.-.+. ...+
T Consensus 109 ~v~v~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n-~~~d~~i~~~R~~~g~~~i~---~~~~ 184 (306)
T PRK08733 109 GVQIEGLEHLQQLQQQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRRHRN-PVFEWAVKRGRLRYATHMFA---NEDL 184 (306)
T ss_pred cEEEeCHHHHHHHHhCCCCEEEEecCchHHHHHHHHHHccCCceEEEeCCCC-HHHHHHHHHHHhhcCCcCcC---cccH
Confidence 5788898765321 23689999999999999976443332232222111111 221 1 112322232 2346
Q ss_pred HHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCcccccccc
Q 010860 357 ARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYF 423 (499)
Q Consensus 357 ~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~ 423 (499)
..+.+.|++|. +++-|.=... +++...+|=+ ++...++||+|+.+.-.
T Consensus 185 r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~------------------- 245 (306)
T PRK08733 185 RATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRRE------------------- 245 (306)
T ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEEe-------------------
Confidence 77888899997 7777664433 2334456641 12237899999987321
Q ss_pred cccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 424 FFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 424 ~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
. +.+++++.||+... ..++..+.++++-+.+++..
T Consensus 246 ----~-~~y~i~i~~~~~~~-----~~~~i~~~t~~~~~~lE~~I 280 (306)
T PRK08733 246 ----G-GRYVLKIAPPLADF-----PSDDVIADTTRVNAAIEDMV 280 (306)
T ss_pred ----C-CeEEEEEECCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 1 13567777877642 23566666666666666554
No 187
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=94.07 E-value=0.8 Score=45.73 Aligned_cols=153 Identities=11% Similarity=0.073 Sum_probs=85.8
Q ss_pred EEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHHH
Q 010860 286 LVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADAA 357 (499)
Q Consensus 286 v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~~ 357 (499)
++++|.|.+... ..++++|+++=|...+|..........++..+..-... +.+ + ...|.-.+. .....+.
T Consensus 85 ~~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~~~n-~~~~~~~~~~R~~~g~~~i~-~~~~~~~ 162 (289)
T PRK08905 85 KDDHGWEHVEAALAEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRPPRK-AALRPLMEAGRARGNMRTAP-ATPQGVR 162 (289)
T ss_pred eeecCHHHHHHHHhcCCCEEEEecccchHHHHHHHHHhcCCceEEEECCCC-HHHHHHHHHHhcccCCceec-cCCccHH
Confidence 577886654311 23678999999999999975433322354333332221 222 1 112322232 1234567
Q ss_pred HHHHHhhCCC-EEEecCCeec-CCCcccccch-------h----hhhcCCcEEEEEEeeccCCccccccCCccccccccc
Q 010860 358 RISELLQKGD-LVVCPEGTTC-RENFLLRFSA-------L----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFF 424 (499)
Q Consensus 358 ~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-------~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~ 424 (499)
.+.+.|++|. +++-+.-..+ +++...+|=+ + +...++||+|+.+.-...
T Consensus 163 ~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~------------------ 224 (289)
T PRK08905 163 MLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR------------------ 224 (289)
T ss_pred HHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC------------------
Confidence 8888999997 7776554332 2233345531 1 223789999999854310
Q ss_pred ccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 425 FMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 425 ~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
...+++++.||+.+. .++.++.++++-+.+++..
T Consensus 225 ----~~~y~~~~~~~~~~~------~~~~~~~t~~~~~~lE~~I 258 (289)
T PRK08905 225 ----GRGYRLHLRPVQEPL------PGDKAADAAVINAEIERLI 258 (289)
T ss_pred ----CCcEEEEEecCCCCC------CCCHHHHHHHHHHHHHHHH
Confidence 113677777777642 2456666666666666554
No 188
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=93.80 E-value=0.19 Score=48.04 Aligned_cols=43 Identities=26% Similarity=0.265 Sum_probs=33.0
Q ss_pred cchhHHHHHHHHh---CCC-CCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 172 VGKWKKLAVLKEF---GED-APDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
.|-.|...++..+ |.. ...+++|||.||++||+.++.++++.-
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 200 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN 200 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC
Confidence 3456777776654 422 247899999999999999999999954
No 189
>PLN02887 hydrolase family protein
Probab=93.57 E-value=0.038 Score=60.38 Aligned_cols=45 Identities=20% Similarity=0.250 Sum_probs=35.4
Q ss_pred cchhHHHHHHHHh---CC-CCCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 172 VGKWKKLAVLKEF---GE-DAPDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~-~~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
.|-.|...|+..+ |. ....+|+|||.||++||+.|+.+|++.-..
T Consensus 504 ~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ 552 (580)
T PLN02887 504 PGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGA 552 (580)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCC
Confidence 4667888777665 42 225789999999999999999999987643
No 190
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.20 E-value=0.28 Score=48.75 Aligned_cols=29 Identities=10% Similarity=0.187 Sum_probs=23.9
Q ss_pred HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 116 VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 116 ~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
.++++| .+|++||=...-++++.++ ||++
T Consensus 29 ~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~ 58 (302)
T PRK12702 29 ALERRSIPLVLYSLRTRAQLEHLCRQ-LRLE 58 (302)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHH-hCCC
Confidence 456678 8899998888888889888 8885
No 191
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=93.13 E-value=0.76 Score=46.19 Aligned_cols=157 Identities=15% Similarity=0.140 Sum_probs=89.0
Q ss_pred EEEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 284 IHLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 284 i~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
-+++++|.|.+... ..++++|+++=|...+|..........+... .+--.+.+.+ + ...|.-.+.+ ..
T Consensus 102 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~-vyr~~~n~~~d~l~~~~R~~~g~~~i~~---~~ 177 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQKQGRGVLLVGVHFLTLELGARIFGQQQPGIG-VYRPHNNPLFDWIQTRGRLRSNKAMIDR---KD 177 (303)
T ss_pred CcEEEECHHHHHHHHhcCCCEEEEecchhHHHHHHHHHHccCCCeE-EEeCCCCHHHHHHHHHHHHhcCCcccCc---cc
Confidence 36788898875321 2367999999999999998644433223221 2211111221 1 1113222322 23
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccc--h------h----hhhcCCcEEEEEEeeccCCccccccCCcccccc
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFS--A------L----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDP 421 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk--~------~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~ 421 (499)
+..+.+.|++|. ++|-+.-.-+ .++...+|= . + +...++||+|+.+.-...
T Consensus 178 ~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~~--------------- 242 (303)
T TIGR02207 178 LRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNED--------------- 242 (303)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeCC---------------
Confidence 677888999997 7777654322 222333442 1 1 223689999999854320
Q ss_pred cccccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhhCCc
Q 010860 422 YFFFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFE 471 (499)
Q Consensus 422 ~~~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~ 471 (499)
...+++++.||++.. ..++..+.++++-+.+++....-
T Consensus 243 -------~~~~~i~~~~~~~~~-----~~~~~~~~t~~~~~~lE~~Ir~~ 280 (303)
T TIGR02207 243 -------GSGYRLKIDPPLDDF-----PGDDEIAAAARMNKIVEKMIMRA 280 (303)
T ss_pred -------CCeEEEEEeCCCCCC-----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 114678888887652 24566777777777766655433
No 192
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.03 E-value=0.92 Score=43.62 Aligned_cols=75 Identities=11% Similarity=0.009 Sum_probs=42.1
Q ss_pred HHHHhCC-CEEEEeCCcHHH---HHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCCCe
Q 010860 115 EVFDKCE-RKVVVTANPTLM---VEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDAPD 190 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~---v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~~~ 190 (499)
+.++++| +|+++||=.+.. .....+. .|++.. .+|...+ .+- .+. . .-+-|-.+-++...+.+..
T Consensus 130 ~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~--~~LiLR~-~~d-~~~----~--~~~yKs~~R~~l~~~GYrI 198 (229)
T TIGR01675 130 QKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW--KHLILRG-LED-SNK----T--VVTYKSEVRKSLMEEGYRI 198 (229)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc--CeeeecC-CCC-CCc----h--HhHHHHHHHHHHHhCCceE
Confidence 3678999 999999988766 5555566 788743 4444431 010 000 0 0111444444443333433
Q ss_pred E-EEeCCcCcH
Q 010860 191 L-GIGDRQTDH 200 (499)
Q Consensus 191 ~-aygDS~~D~ 200 (499)
+ ..||..+|+
T Consensus 199 v~~iGDq~sDl 209 (229)
T TIGR01675 199 WGNIGDQWSDL 209 (229)
T ss_pred EEEECCChHHh
Confidence 3 579999998
No 193
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=92.88 E-value=0.42 Score=56.42 Aligned_cols=36 Identities=14% Similarity=0.311 Sum_probs=31.1
Q ss_pred hccHH---HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 108 DVRKE---SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 108 ~i~~~---~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
.++|+ +++.++++| +++++||-...-+..+|++ +|+
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gi 695 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGI 695 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCC
Confidence 35554 455789999 9999999999999999999 998
No 194
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=92.51 E-value=1.7 Score=46.18 Aligned_cols=100 Identities=10% Similarity=0.203 Sum_probs=59.4
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHHHHHHHHhhCCC-EEEe
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADAARISELLQKGD-LVVC 371 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~~~~~~~l~~G~-l~IF 371 (499)
++|+|+++=|...||..........++..+..-... +.+ + ...|.-.+.. ++.+..+.+.|++|. +++-
T Consensus 139 gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp~kN-p~ld~li~~~R~r~G~~lI~~--~~giR~liraLk~G~~vgiL 215 (454)
T PRK05906 139 QEGAILFCGHQANWELPFLYITKRYPGLAFAKPIKN-RRLNKKIFSLRESFKGKIVPP--KNGINQALRALHQGEVVGIV 215 (454)
T ss_pred CCCEEEEeehhhHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHhcCCeeecC--chHHHHHHHHHhcCCEEEEE
Confidence 579999999999999965533222343222222211 222 1 1223333432 356788888999997 8888
Q ss_pred cCCeecCCCcccccch-----------hhhhcCCcEEEEEEe
Q 010860 372 PEGTTCRENFLLRFSA-----------LFAEMSDRIVPVAVN 402 (499)
Q Consensus 372 PEGTrt~~~~l~~Fk~-----------~~~~~~~pVvPV~I~ 402 (499)
|.-.-.+++...||=+ ++...++||+|+.+.
T Consensus 216 ~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~ 257 (454)
T PRK05906 216 GDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIY 257 (454)
T ss_pred eCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 7755433444456641 222379999999874
No 195
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=92.49 E-value=0.064 Score=52.38 Aligned_cols=42 Identities=17% Similarity=0.103 Sum_probs=33.5
Q ss_pred cchhHHHHHHHHhC---CC-CCeEEEeCCcCcHHHHhccccCeecC
Q 010860 172 VGKWKKLAVLKEFG---ED-APDLGIGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 172 ~g~~K~~~l~~~~~---~~-~~~~aygDS~~D~pmL~~a~~~~~Vn 213 (499)
.|..|...|+.++. .. ...+++|||.||++||+.++.++++.
T Consensus 185 ~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 185 KGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 46678888777653 21 25789999999999999999999994
No 196
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=92.28 E-value=1.6 Score=43.85 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=65.4
Q ss_pred EEEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHH
Q 010860 284 IHLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAAD 355 (499)
Q Consensus 284 i~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~ 355 (499)
-+++++|.|.+... ..++++|+++=|...+|..........++..+..-... +.+ + ...|.-.+.+ .+
T Consensus 106 ~~v~~~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~~n-~~~d~~~~~~R~~~g~~~i~~---~~ 181 (305)
T PRK08025 106 KWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNN-KLMEWVQTRGRMRSNKAMIGR---NN 181 (305)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCC-HHHHHHHHHHHhccCCcCcCc---cc
Confidence 36788898875321 13679999999999999976543332243222222221 111 1 1223333432 23
Q ss_pred HHHHHHHhhCCC-EEEecCCeec-CCCcccccch------------hhhhcCCcEEEEEEeec
Q 010860 356 AARISELLQKGD-LVVCPEGTTC-RENFLLRFSA------------LFAEMSDRIVPVAVNCK 404 (499)
Q Consensus 356 ~~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~------------~~~~~~~pVvPV~I~~~ 404 (499)
+..+.+.|++|. +++-|.=.-. +++...+|=+ ++...++||+|+.+...
T Consensus 182 ~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R~ 244 (305)
T PRK08025 182 LRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRK 244 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEEe
Confidence 667888899997 7777553322 2223335421 12236899999998543
No 197
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=92.26 E-value=0.61 Score=55.18 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=29.5
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
+++++.++++| ++|++||-...-+..+|+. .|+
T Consensus 637 ~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~i 670 (1057)
T TIGR01652 637 PETIELLRQAGIKIWVLTGDKVETAINIGYS-CRL 670 (1057)
T ss_pred HHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCC
Confidence 56667899999 9999999999999999998 776
No 198
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=91.94 E-value=0.07 Score=48.40 Aligned_cols=17 Identities=41% Similarity=0.513 Sum_probs=13.2
Q ss_pred eEEEEecCCceeecCCc
Q 010860 21 GSIAADLDGTLLVSRSS 37 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s~ 37 (499)
++|+||+||||+...|.
T Consensus 1 Kia~fD~DgTLi~~~s~ 17 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSG 17 (159)
T ss_dssp SEEEE-SCTTTEE-STS
T ss_pred CEEEEeCCCCccCCCCC
Confidence 68999999999998664
No 199
>PTZ00174 phosphomannomutase; Provisional
Probab=91.75 E-value=0.12 Score=50.43 Aligned_cols=40 Identities=13% Similarity=-0.095 Sum_probs=31.5
Q ss_pred cchhHHHHHHHHhCCCCCeEEEeC----CcCcHHHHhcc---ccCee
Q 010860 172 VGKWKKLAVLKEFGEDAPDLGIGD----RQTDHDFMSIC---KEGYM 211 (499)
Q Consensus 172 ~g~~K~~~l~~~~~~~~~~~aygD----S~~D~pmL~~a---~~~~~ 211 (499)
.|-.|...|+.........+|+|| +.||++||+.+ |++|+
T Consensus 185 ~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 185 KGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 577899999988765446789999 89999999954 55555
No 200
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=91.62 E-value=0.13 Score=50.28 Aligned_cols=45 Identities=22% Similarity=0.192 Sum_probs=31.3
Q ss_pred cchhHHHHHHHH---hCCC-CCeEEEeCCcCcHHHHhccccCeecCCCC
Q 010860 172 VGKWKKLAVLKE---FGED-APDLGIGDRQTDHDFMSICKEGYMVLPSK 216 (499)
Q Consensus 172 ~g~~K~~~l~~~---~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp~~ 216 (499)
.+.+|-.+++-. ++.+ ...++.|||.||++||..+.++++|....
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQ 210 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCC
Confidence 345677766544 4422 35789999999999999999999998743
No 201
>PLN02382 probable sucrose-phosphatase
Probab=91.61 E-value=0.12 Score=54.36 Aligned_cols=44 Identities=27% Similarity=0.299 Sum_probs=32.8
Q ss_pred cchhHHHHHHHH---h---CC-CCCeEEEeCCcCcHHHHhccc-cCeecCCC
Q 010860 172 VGKWKKLAVLKE---F---GE-DAPDLGIGDRQTDHDFMSICK-EGYMVLPS 215 (499)
Q Consensus 172 ~g~~K~~~l~~~---~---~~-~~~~~aygDS~~D~pmL~~a~-~~~~Vnp~ 215 (499)
.|..|..+|+.. + |. ....+++|||.||++||+.++ .++++...
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 455677776654 3 32 235789999999999999999 79998543
No 202
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=91.61 E-value=2.1 Score=48.03 Aligned_cols=143 Identities=12% Similarity=0.024 Sum_probs=78.8
Q ss_pred CCCeEEEecCCCCChHHHHHHHh-CCccceeeecccccccccccCCeeEeec---CCHHHHHHHHHHhhCCC-EEEecCC
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIAL-GRKVSCVTYSVSKLSRFLSPIPAIALTR---DRAADAARISELLQKGD-LVVCPEG 374 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~-~~~~~~v~~~v~k~~~~~~~~~~i~i~R---~~~~~~~~~~~~l~~G~-l~IFPEG 374 (499)
++|+|+++=|.+.|+........ ..|+..+...+. .+....|.-.|.. +....+..+.+.|++|. |+|-|--
T Consensus 478 ~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~---~~R~~~g~~~i~~~~~~~~~~~r~i~~aLk~g~~v~il~Dq 554 (656)
T PRK15174 478 QRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPG---VLKGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAIDG 554 (656)
T ss_pred CCCEEEEecCcchhhHHHHHHHHcCCCceeeecchH---HHHHhcCCceeccCCCCcchHHHHHHHHHHcCCeEEEEeCC
Confidence 57999999999999997655433 223222111111 1112223333432 22356778999999997 7777555
Q ss_pred eecCCCcccccch-------h----hhhcCCcEEEEEEeeccCCccccccCCcccccccccccCCCCeEEEEEccccCCc
Q 010860 375 TTCRENFLLRFSA-------L----FAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMNPRPTYEVTFLDRLPEE 443 (499)
Q Consensus 375 Trt~~~~l~~Fk~-------~----~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~l~pi~~~ 443 (499)
.-.+++...+|=+ + +...++||+|+...... ....+++++.||+..
T Consensus 555 ~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~~~----------------------~~~~y~l~~~~~~~~- 611 (656)
T PRK15174 555 ALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIWKN----------------------RHIHFVLERMVDPLK- 611 (656)
T ss_pred CCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEEec----------------------CceeEEEEecCCCcc-
Confidence 5333333335531 2 22368999999884321 011467777776432
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHhhCCcccC
Q 010860 444 MTCKAGGKSAIEVANYVQKVLGDVLGFECTG 474 (499)
Q Consensus 444 ~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~ 474 (499)
..+..+..+++.+.+++.+..-+.+
T Consensus 612 ------~~~~~~~~~~~~~~y~~~l~~~~~~ 636 (656)
T PRK15174 612 ------FESQLSFTERWKENYLQCVTRILQS 636 (656)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHhc
Confidence 1345555566666665555433333
No 203
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=91.58 E-value=0.11 Score=50.14 Aligned_cols=50 Identities=22% Similarity=0.165 Sum_probs=35.4
Q ss_pred cchhHHHHHHHH---hCCC-CCeEEEeCCcCcHHHHhccccCeecCC-CCCCCCC
Q 010860 172 VGKWKKLAVLKE---FGED-APDLGIGDRQTDHDFMSICKEGYMVLP-SKSAKPL 221 (499)
Q Consensus 172 ~g~~K~~~l~~~---~~~~-~~~~aygDS~~D~pmL~~a~~~~~Vnp-~~~~~~~ 221 (499)
.|..|...++.. +|.. ...+++|||.||++||+.++.++++.. ++.+...
T Consensus 156 ~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~ 210 (236)
T TIGR02471 156 LRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGL 210 (236)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHh
Confidence 355677666654 3422 247899999999999999999999964 3444433
No 204
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=91.43 E-value=1.3 Score=38.22 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=51.7
Q ss_pred HHHHHHhCC-CEEEEeCCc--------HHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH
Q 010860 113 SYEVFDKCE-RKVVVTANP--------TLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE 183 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~--------~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~ 183 (499)
+++.++++| +++|+|.+. ...++.+.++ +|++... .+. -+ + ... +. .+=...+.+.
T Consensus 33 ~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~----~~~--~~---~-~~K-P~---~~~~~~~~~~ 97 (132)
T TIGR01662 33 ALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDV----LYA--CP---H-CRK-PK---PGMFLEALKR 97 (132)
T ss_pred HHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEE----EEE--CC---C-CCC-CC---hHHHHHHHHH
Confidence 445678889 999999998 7788888888 8875211 111 11 1 111 11 1122344444
Q ss_pred h-CCC-CCeEEEeC-CcCcHHHHhccccCe
Q 010860 184 F-GED-APDLGIGD-RQTDHDFMSICKEGY 210 (499)
Q Consensus 184 ~-~~~-~~~~aygD-S~~D~pmL~~a~~~~ 210 (499)
+ +.+ ..++.+|| +.+|+.+-+.+|-..
T Consensus 98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred cCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 5 232 34778999 799999999888543
No 205
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=91.43 E-value=0.37 Score=48.32 Aligned_cols=64 Identities=23% Similarity=0.358 Sum_probs=39.6
Q ss_pred cccCCeeEeecCCHHHHHHHHHHhhC---CC-EEEecCCeec-----CCCcccccc--hhh----hhcCCcEEEEEEeec
Q 010860 340 LSPIPAIALTRDRAADAARISELLQK---GD-LVVCPEGTTC-----RENFLLRFS--ALF----AEMSDRIVPVAVNCK 404 (499)
Q Consensus 340 ~~~~~~i~i~R~~~~~~~~~~~~l~~---G~-l~IFPEGTrt-----~~~~l~~Fk--~~~----~~~~~pVvPV~I~~~ 404 (499)
+.++|.+.++|++ +...|++ |. ++|+|-|..- ++...+-.| ++| -+.|+|||||.--+.
T Consensus 117 ~~~~G~~~~sr~s------~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE 190 (297)
T PF03982_consen 117 LLWLGAVSASRES------IRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGE 190 (297)
T ss_pred hhhcccccccccc------cceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCC
Confidence 3445666555532 4445554 44 9999998764 333333333 344 347999999998887
Q ss_pred cCCcc
Q 010860 405 QNMFY 409 (499)
Q Consensus 405 ~~~~~ 409 (499)
..+++
T Consensus 191 ~d~~~ 195 (297)
T PF03982_consen 191 NDLYD 195 (297)
T ss_pred hhhee
Confidence 76553
No 206
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=91.37 E-value=0.6 Score=51.59 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=26.9
Q ss_pred HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEe
Q 010860 116 VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLG 149 (499)
Q Consensus 116 ~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vig 149 (499)
.++++| .++++||=+...+++++++ ||++ .+||
T Consensus 444 ~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~~~I~ 478 (694)
T PRK14502 444 LLKDKELPLVFCSAKTMGEQDLYRNE-LGIKDPFIT 478 (694)
T ss_pred HHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCeEEE
Confidence 456779 9999999999999999999 9974 4444
No 207
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.31 E-value=0.11 Score=48.77 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=32.0
Q ss_pred cchhHHHHHHHHh---CC-CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 172 VGKWKKLAVLKEF---GE-DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 172 ~g~~K~~~l~~~~---~~-~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
.|..|...++..+ +. ...++++|||.||++|++.++.++++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4667887777665 31 22478999999999999999999875
No 208
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=91.02 E-value=6.5 Score=39.28 Aligned_cols=155 Identities=11% Similarity=0.044 Sum_probs=84.9
Q ss_pred EEEEcCCCCCCCC-CCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc---c----ccCCeeEeecCCHHHH
Q 010860 285 HLVIRGNPPPAPS-SGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF---L----SPIPAIALTRDRAADA 356 (499)
Q Consensus 285 ~v~v~G~~~~p~~-~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~---~----~~~~~i~i~R~~~~~~ 356 (499)
.++++|.|.+... ..++++|+++=|...++..........+...+..- .+.+.+ + ...|.-.+. .....+
T Consensus 95 ~~~~~g~e~l~~a~~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~-~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 172 (295)
T PRK05645 95 VREVEGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRP-PKLKAVDELLRKQRVQLGNRVAP-STKEGI 172 (295)
T ss_pred eeEecCHHHHHHHHhcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeC-CCCHHHHHHHHHHhCCCCCeEee-cCcccH
Confidence 4577887764311 23678999999999999975433322232211111 111221 1 122433342 223467
Q ss_pred HHHHHHhhCCC-EEEecCCeec-CCCcccccch-----------hhhhcCCcEEEEEEeeccCCccccccCCcccccccc
Q 010860 357 ARISELLQKGD-LVVCPEGTTC-RENFLLRFSA-----------LFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYF 423 (499)
Q Consensus 357 ~~~~~~l~~G~-l~IFPEGTrt-~~~~l~~Fk~-----------~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~ 423 (499)
..+.+.|++|. |+|-+.=..+ +++...+|=+ ++...++||+|+.+.....
T Consensus 173 r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~~~----------------- 235 (295)
T PRK05645 173 LSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPD----------------- 235 (295)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEcCC-----------------
Confidence 77888899997 7777554433 2233445531 1122688999999854310
Q ss_pred cccCCCCeEEEEEccccCCcccccCCCCCHHHHHHHHHHHHHHhh
Q 010860 424 FFMNPRPTYEVTFLDRLPEEMTCKAGGKSAIEVANYVQKVLGDVL 468 (499)
Q Consensus 424 ~~~~~~~~v~v~~l~pi~~~~~~~~~~~~~~~la~~v~~~i~~~l 468 (499)
...+++++.++++.. ..++..+.++++-+.+++..
T Consensus 236 -----~~~y~i~~~~~~~~~-----~~~~~~~~t~~~~~~lE~~I 270 (295)
T PRK05645 236 -----GSGYKVILEAAPEDM-----YSTDVEVSAAAMSKVVERYV 270 (295)
T ss_pred -----CCeEEEEEecCCcCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 113677776665432 23566666666666666554
No 209
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.85 E-value=0.92 Score=41.18 Aligned_cols=90 Identities=19% Similarity=0.101 Sum_probs=53.3
Q ss_pred HHHHHHHhCC-CEEEEeCC---------------cHHHHHHHHhhhcCCc--EEE-eCeEEEecCCCceeeeEecCCccc
Q 010860 112 ESYEVFDKCE-RKVVVTAN---------------PTLMVEPFVKDFLGGD--KVL-GTEIEVNPRTKRATGFVKRPGVLV 172 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas---------------~~~~v~~ia~~~lg~d--~vi-gt~l~~~~~~g~~tG~~~~~~~~~ 172 (499)
++++.++++| +++|+|.. ....++.+.+. +|+. .++ |+....++ .+. .. +
T Consensus 36 e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~ii~~~~~~~~~-~~~-----~K-P--- 104 (161)
T TIGR01261 36 PALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGIIFDDVLICPHFPDDN-CDC-----RK-P--- 104 (161)
T ss_pred HHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCceeEEEECCCCCCCC-CCC-----CC-C---
Confidence 4456788899 99999985 45677778887 7764 343 21110000 000 00 1
Q ss_pred chhHHHHHHHHhCC-CCCeEEEeCCcCcHHHHhccccCeec
Q 010860 173 GKWKKLAVLKEFGE-DAPDLGIGDRQTDHDFMSICKEGYMV 212 (499)
Q Consensus 173 g~~K~~~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~~V 212 (499)
..+....+.+..+. ...++++|||.+|+..-+.+|-..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 12333444444442 23578999999999999988866543
No 210
>PLN02887 hydrolase family protein
Probab=90.65 E-value=0.82 Score=50.15 Aligned_cols=31 Identities=13% Similarity=-0.010 Sum_probs=25.9
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++.++++| +++|+||=+..-+.++.+. +|++
T Consensus 334 I~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 334 LKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 34567889 9999999998889999998 8864
No 211
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.63 E-value=16 Score=34.79 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHhhhHHHhhccHHHH--HHHHhC-C-CEEEEeCCcHHHHHHHHhhhcCC----cEEEeCeEEEecCCC
Q 010860 88 LKIRDIELASRAVLPRFYAADVRKESY--EVFDKC-E-RKVVVTANPTLMVEPFVKDFLGG----DKVLGTEIEVNPRTK 159 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~i~~~~~--~~~~~~-G-~vvlvSas~~~~v~~ia~~~lg~----d~vigt~l~~~~~~g 159 (499)
.+.+|..+.+...++- +.+.|+.. ..+..- . +.|+-|-+...-+..+.+. ||+ |.++|-+-- +-
T Consensus 81 ~d~deY~~~V~~~LPl---q~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~----np 152 (244)
T KOG3109|consen 81 FDADEYHRFVHGRLPL---QDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETL----NP 152 (244)
T ss_pred CCHHHHHHHhhccCcH---hhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeecc----CC
Confidence 3466666655555432 22544432 233332 3 4999999999999999999 997 455554321 11
Q ss_pred ceeeeEecCCcccchhHH-HHHHHHhCC--CCCeEEEeCCcCcHHHHhccc
Q 010860 160 RATGFVKRPGVLVGKWKK-LAVLKEFGE--DAPDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 160 ~~tG~~~~~~~~~g~~K~-~~l~~~~~~--~~~~~aygDS~~D~pmL~~a~ 207 (499)
. ..+-+|.-..++ +...+.+|. ...++++-||.+-+.==+.+|
T Consensus 153 ~-----~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vG 198 (244)
T KOG3109|consen 153 I-----EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVG 198 (244)
T ss_pred C-----CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhcc
Confidence 1 111233333332 223333452 346889999998776555544
No 212
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=90.61 E-value=0.49 Score=47.28 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=60.5
Q ss_pred ccHHHHH---HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE-----EEeCeEEEecCCCce---eeeEecCCcccchhH
Q 010860 109 VRKESYE---VFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK-----VLGTEIEVNPRTKRA---TGFVKRPGVLVGKWK 176 (499)
Q Consensus 109 i~~~~~~---~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~-----vigt~l~~~~~~g~~---tG~~~~~~~~~g~~K 176 (499)
.+|.+.+ .++++| .++++|+.++...+...+. ||.+. ++|.+.. ..| .+. +.+ ..+-+
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~-----~~~~~~~~~--~kp--~p~~~ 257 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPD-----MHFQREQGD--KRP--DDVVK 257 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcch-----hhhcccCCC--CCC--cHHHH
Confidence 4555554 577889 9999999999999999988 77653 3333310 000 000 111 23456
Q ss_pred HHHHHHHhC-CCCCeEEEeCCcCcHHHHhccccCee
Q 010860 177 KLAVLKEFG-EDAPDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 177 ~~~l~~~~~-~~~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
...+++... ....++++|||.+|+.+.+.+|-+++
T Consensus 258 ~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 258 EEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 566666422 22357889999999999999997754
No 213
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=90.49 E-value=0.79 Score=51.17 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=62.2
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeee-EecC---------------Ccccchh
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGF-VKRP---------------GVLVGKW 175 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~-~~~~---------------~~~~g~~ 175 (499)
+++..++.| +|.++||-...-++.||++ +|+- +..-++. .-.+||+ ++.- .-|.-++
T Consensus 592 ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~---~~~ed~~--~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~H 665 (972)
T KOG0202|consen 592 AIELCRQAGIRVIMITGDNKETAEAIARE-IGIF---SEDEDVS--SMALTGSEFDDLSDEELDDAVRRVLVFARAEPQH 665 (972)
T ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCC---cCCcccc--ccccchhhhhcCCHHHHHHHhhcceEEEecCchh
Confidence 445788999 9999999999999999999 9962 1222221 2234442 1100 0023456
Q ss_pred HHHHHHHHhCCCCCeEE-EeCCcCcHHHHhccccCeecC
Q 010860 176 KKLAVLKEFGEDAPDLG-IGDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 176 K~~~l~~~~~~~~~~~a-ygDS~~D~pmL~~a~~~~~Vn 213 (499)
|.+-++.+-. .....| -||+.||.|=|+.|+-.++-.
T Consensus 666 K~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 666 KLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred HHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeec
Confidence 7666655432 224445 599999999999999988876
No 214
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=90.17 E-value=0.25 Score=48.02 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=30.8
Q ss_pred chhHHHHHHHH---hCC-CCCeEEEeCCcCcHHHHhc-cccCeecCC
Q 010860 173 GKWKKLAVLKE---FGE-DAPDLGIGDRQTDHDFMSI-CKEGYMVLP 214 (499)
Q Consensus 173 g~~K~~~l~~~---~~~-~~~~~aygDS~~D~pmL~~-a~~~~~Vnp 214 (499)
|..|...++.. +|. ...++++|||.||++||+. ++.+++|.-
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 44566666544 442 2357899999999999998 678888764
No 215
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=87.36 E-value=1.8 Score=44.54 Aligned_cols=91 Identities=20% Similarity=0.120 Sum_probs=54.0
Q ss_pred HHHHHHHhCC-CEEEEeCC---------------cHHHHHHHHhhhcCCc--EE-EeCeEEEecCCCceeeeEecCCccc
Q 010860 112 ESYEVFDKCE-RKVVVTAN---------------PTLMVEPFVKDFLGGD--KV-LGTEIEVNPRTKRATGFVKRPGVLV 172 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas---------------~~~~v~~ia~~~lg~d--~v-igt~l~~~~~~g~~tG~~~~~~~~~ 172 (499)
+.+++++++| +++|+|.. +...+.++.+. +|+. .+ ++.....+ .+..
T Consensus 37 e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~fd~i~i~~~~~sd-------------~~~~ 102 (354)
T PRK05446 37 PALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIKFDEVLICPHFPED-------------NCSC 102 (354)
T ss_pred HHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCceeeEEEeCCcCcc-------------cCCC
Confidence 3456788899 99999984 34456677777 7763 22 22211100 1111
Q ss_pred chhHHHHHHH---HhCC-CCCeEEEeCCcCcHHHHhccccC-eecCCCC
Q 010860 173 GKWKKLAVLK---EFGE-DAPDLGIGDRQTDHDFMSICKEG-YMVLPSK 216 (499)
Q Consensus 173 g~~K~~~l~~---~~~~-~~~~~aygDS~~D~pmL~~a~~~-~~Vnp~~ 216 (499)
+.-|...+.. ..+. ...++.+|||.+|+..-+.+|-. +.|||+.
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC
Confidence 2223333333 2332 23578899999999999988854 6677755
No 216
>PLN03190 aminophospholipid translocase; Provisional
Probab=86.69 E-value=1.2 Score=53.17 Aligned_cols=52 Identities=15% Similarity=0.266 Sum_probs=37.0
Q ss_pred CeEEEeCCcCcHHHHhccccCeecCCCCCCCC-------CCcccCCceeEEccCccCCC
Q 010860 189 PDLGIGDRQTDHDFMSICKEGYMVLPSKSAKP-------LPRDRLKSRIIFHDGRLVQR 240 (499)
Q Consensus 189 ~~~aygDS~~D~pmL~~a~~~~~Vnp~~~~~~-------~~~~~~~~~~~f~~~r~~~~ 240 (499)
...|.||+.||.|||+.|+..+-+...+...+ +++=+.-..+++-.||...+
T Consensus 873 vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~ 931 (1178)
T PLN03190 873 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQ 931 (1178)
T ss_pred EEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHH
Confidence 36789999999999999999998877664322 33324446666666786543
No 217
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=86.58 E-value=3.5 Score=37.74 Aligned_cols=96 Identities=16% Similarity=0.013 Sum_probs=53.1
Q ss_pred HHHHHHHhCC-CEEEEeCCcH---------------HHHHHHHhhhcC--CcEEEeCeEEEecCCCceeeeEecCCcccc
Q 010860 112 ESYEVFDKCE-RKVVVTANPT---------------LMVEPFVKDFLG--GDKVLGTEIEVNPRTKRATGFVKRPGVLVG 173 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~---------------~~v~~ia~~~lg--~d~vigt~l~~~~~~g~~tG~~~~~~~~~g 173 (499)
+++++++++| +++|+|.++. .+++.+.++ +| ++.++.+.... .| ++++.. .+..+
T Consensus 33 e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~~~~~~~---~~--~~~~~~-~~~~~ 105 (176)
T TIGR00213 33 DALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVDLDGIYYCPHHP---EG--VEEFRQ-VCDCR 105 (176)
T ss_pred HHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCCccEEEECCCCC---cc--cccccC-CCCCC
Confidence 4556788999 9999998874 234444555 44 34544332111 11 111111 11011
Q ss_pred hhHHH---HHHHHhCC-CCCeEEEeCCcCcHHHHhccccCe--ecCC
Q 010860 174 KWKKL---AVLKEFGE-DAPDLGIGDRQTDHDFMSICKEGY--MVLP 214 (499)
Q Consensus 174 ~~K~~---~l~~~~~~-~~~~~aygDS~~D~pmL~~a~~~~--~Vnp 214 (499)
.-+.. ...+.+|. ...++.+|||.+|+..-+.+|-.. .|+.
T Consensus 106 KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred CCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEec
Confidence 11222 23333452 235788999999999999999875 4443
No 218
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=86.05 E-value=0.45 Score=41.36 Aligned_cols=15 Identities=27% Similarity=0.485 Sum_probs=13.1
Q ss_pred CeEEEEecCCceeec
Q 010860 20 YGSIAADLDGTLLVS 34 (499)
Q Consensus 20 ~~~avFD~DgTL~~~ 34 (499)
|++++||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 578999999999864
No 219
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=85.32 E-value=3.8 Score=37.56 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=21.3
Q ss_pred CeEEEeCCcCcHHHHhccccCeecCC
Q 010860 189 PDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 189 ~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
.++.+|||.+|+..-+.+|-..+...
T Consensus 122 ~~~~VgDs~~Di~~A~~aG~~~i~v~ 147 (181)
T PRK08942 122 GSPMVGDSLRDLQAAAAAGVTPVLVR 147 (181)
T ss_pred hEEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 57889999999999999997655443
No 220
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=85.01 E-value=0.76 Score=45.35 Aligned_cols=44 Identities=20% Similarity=0.109 Sum_probs=33.5
Q ss_pred cchhHHHHHHHHhCC----CCCeEEEeCCcCcHHHHhcc----ccCeecCCC
Q 010860 172 VGKWKKLAVLKEFGE----DAPDLGIGDRQTDHDFMSIC----KEGYMVLPS 215 (499)
Q Consensus 172 ~g~~K~~~l~~~~~~----~~~~~aygDS~~D~pmL~~a----~~~~~Vnp~ 215 (499)
.|..|...+++.+.. ....+++||+.||.+||+.+ +.+++|...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 466788888876532 12467899999999999999 778888643
No 221
>PTZ00174 phosphomannomutase; Provisional
Probab=84.95 E-value=0.84 Score=44.38 Aligned_cols=18 Identities=33% Similarity=0.394 Sum_probs=15.5
Q ss_pred CCeEEEEecCCceeecCC
Q 010860 19 AYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s 36 (499)
..++.+||+||||+..+.
T Consensus 4 ~~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN 21 (247)
T ss_pred CCeEEEEECcCCCcCCCC
Confidence 468999999999998654
No 222
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=84.93 E-value=5.4 Score=35.29 Aligned_cols=86 Identities=21% Similarity=0.151 Sum_probs=50.5
Q ss_pred HHHHHHHhCC-CEEEEeCCcH---------------HHHHHHHhhhcCCcE---EEeCeEEEecCCCceeeeEecCCccc
Q 010860 112 ESYEVFDKCE-RKVVVTANPT---------------LMVEPFVKDFLGGDK---VLGTEIEVNPRTKRATGFVKRPGVLV 172 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~---------------~~v~~ia~~~lg~d~---vigt~l~~~~~~g~~tG~~~~~~~~~ 172 (499)
++++.++++| +++|+|.+.. ..++.+.+. +|++. +.+.. . +.... .+ .
T Consensus 34 ~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~-~--------~~~~~--~~-~ 100 (147)
T TIGR01656 34 PALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPH-H--------PADNC--SC-R 100 (147)
T ss_pred HHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCC-C--------CCCCC--CC-C
Confidence 3556788999 9999998873 466677777 88752 11110 0 00000 01 1
Q ss_pred chhHHHHH---HHHhCCC-CCeEEEeCCcCcHHHHhccccCee
Q 010860 173 GKWKKLAV---LKEFGED-APDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 173 g~~K~~~l---~~~~~~~-~~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
..|.+.+ .+.++.. ..++..|||..|+..-+.++-..+
T Consensus 101 -KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 101 -KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 1123333 3334532 247788999999999888876544
No 223
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=84.79 E-value=1.6 Score=38.84 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=24.3
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++++ ++ .++|+|++...+++.+.+. +|++
T Consensus 55 ~~L~-~~~~l~I~Ts~~~~~~~~il~~-l~~~ 84 (148)
T smart00577 55 KRAS-ELFELVVFTAGLRMYADPVLDL-LDPK 84 (148)
T ss_pred HHHH-hccEEEEEeCCcHHHHHHHHHH-hCcC
Confidence 3455 68 9999999999999999998 7763
No 224
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.50 E-value=2 Score=41.42 Aligned_cols=117 Identities=12% Similarity=0.049 Sum_probs=71.9
Q ss_pred cCCCHHHHHHHHHHHhhhHHHhhccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC---cEEEeCeEEEecCCCce
Q 010860 86 SGLKIRDIELASRAVLPRFYAADVRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG---DKVLGTEIEVNPRTKRA 161 (499)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~---d~vigt~l~~~~~~g~~ 161 (499)
.|.+..++++++++.--.. +.-+.+-.+.+++.+ .+.|.||+.-..++.+.++-++. -+++++-+.+.. +|.+
T Consensus 121 ~~f~k~~I~~~Va~s~i~l--Reg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~e-dg~l 197 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAESNIAL--REGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDE-DGNL 197 (298)
T ss_pred CCcCHHHHHHHHHHhhHHH--HHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcc-cchh
Confidence 4577888877776542111 111234445789999 99999999888888777663443 467777777753 5553
Q ss_pred ---eeeEecCCcccchhHHHHH-HHHhC---CCCCeEEEeCCcCcHHHHhccc
Q 010860 162 ---TGFVKRPGVLVGKWKKLAV-LKEFG---EDAPDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 162 ---tG~~~~~~~~~g~~K~~~l-~~~~~---~~~~~~aygDS~~D~pmL~~a~ 207 (499)
.+.+.... ....++-+. .+++. .....+.-|||.+|+-|-+-|-
T Consensus 198 ~gF~~~Lihtf--nkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~ 248 (298)
T KOG3128|consen 198 CGFSQPLIHTF--NKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP 248 (298)
T ss_pred hhhhHHHHHHH--ccchHHHHhhhHHHhhccCCceEEEeccccccchhhcCCc
Confidence 33444321 233454444 34442 1224667899999999976543
No 225
>PRK06769 hypothetical protein; Validated
Probab=84.10 E-value=2.6 Score=38.55 Aligned_cols=92 Identities=17% Similarity=0.133 Sum_probs=50.1
Q ss_pred HHHHHHHhCC-CEEEEeCCcHH---------HHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHH
Q 010860 112 ESYEVFDKCE-RKVVVTANPTL---------MVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVL 181 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~---------~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~ 181 (499)
+.+++++++| ++.|+|.+... +.+. .+. +|++.++-+..... ++. + ... +. .+=...+.
T Consensus 35 e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~-l~~-~g~~~~~~~~~~~~--~~~--~-~~K-P~---p~~~~~~~ 103 (173)
T PRK06769 35 ASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE-LKG-FGFDDIYLCPHKHG--DGC--E-CRK-PS---TGMLLQAA 103 (173)
T ss_pred HHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH-HHh-CCcCEEEECcCCCC--CCC--C-CCC-CC---HHHHHHHH
Confidence 3455688889 99999988642 2332 455 78876543221100 000 0 000 11 11112222
Q ss_pred HHhCC-CCCeEEEeCCcCcHHHHhccccCe-ecCC
Q 010860 182 KEFGE-DAPDLGIGDRQTDHDFMSICKEGY-MVLP 214 (499)
Q Consensus 182 ~~~~~-~~~~~aygDS~~D~pmL~~a~~~~-~Vnp 214 (499)
+.++. ...++.+|||..|+..-+.+|-.. .|+.
T Consensus 104 ~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~ 138 (173)
T PRK06769 104 EKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRT 138 (173)
T ss_pred HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 23442 235889999999999999888554 4544
No 226
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=83.58 E-value=0.64 Score=46.20 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=28.1
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK 146 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~ 146 (499)
++++++++| .++|+|++....++...+. +|++.
T Consensus 154 aL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~ 187 (301)
T TIGR01684 154 SLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDR 187 (301)
T ss_pred HHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCc
Confidence 445678889 9999999999999999998 99874
No 227
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=81.76 E-value=2.4 Score=39.08 Aligned_cols=33 Identities=3% Similarity=-0.059 Sum_probs=27.0
Q ss_pred HHHHHHHhCC-CEEEEeCC-cHHHHHHHHhhhcCCc
Q 010860 112 ESYEVFDKCE-RKVVVTAN-PTLMVEPFVKDFLGGD 145 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas-~~~~v~~ia~~~lg~d 145 (499)
+.++.++++| ++.|+|.+ ...+++.+.+. +|++
T Consensus 52 elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~ 86 (174)
T TIGR01685 52 DVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEIT 86 (174)
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcC
Confidence 3445788999 99999988 88899988887 7864
No 228
>PLN02423 phosphomannomutase
Probab=81.14 E-value=0.92 Score=44.16 Aligned_cols=33 Identities=18% Similarity=0.024 Sum_probs=28.6
Q ss_pred cchhHHHHHHHHhCCCCCeEEEeC----CcCcHHHHhc
Q 010860 172 VGKWKKLAVLKEFGEDAPDLGIGD----RQTDHDFMSI 205 (499)
Q Consensus 172 ~g~~K~~~l~~~~~~~~~~~aygD----S~~D~pmL~~ 205 (499)
.|-.|...|+... .....+|+|| +.||++||+.
T Consensus 186 ~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~ 222 (245)
T PLN02423 186 QGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFES 222 (245)
T ss_pred CCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhC
Confidence 5778999999988 4446889999 7999999997
No 229
>PLN02423 phosphomannomutase
Probab=81.14 E-value=1.7 Score=42.35 Aligned_cols=19 Identities=37% Similarity=0.441 Sum_probs=14.4
Q ss_pred CCCe-EEEEecCCceeecCC
Q 010860 18 SAYG-SIAADLDGTLLVSRS 36 (499)
Q Consensus 18 ~~~~-~avFD~DgTL~~~~s 36 (499)
+.++ +++||+||||++.+.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRK 23 (245)
T ss_pred CccceEEEEeccCCCcCCCC
Confidence 3455 566999999998654
No 230
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=81.11 E-value=6.1 Score=35.98 Aligned_cols=81 Identities=17% Similarity=0.050 Sum_probs=51.0
Q ss_pred HHHHHHhCC-CEEEEeCCc-HHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCC-CC
Q 010860 113 SYEVFDKCE-RKVVVTANP-TLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGED-AP 189 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~-~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~-~~ 189 (499)
+++.++++| +++|+|.+. ...++.+++. +|+.... . ..+ +. .+-...+.+.++.. ..
T Consensus 51 ~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~------~--~~K--------P~---p~~~~~~l~~~~~~~~~ 110 (170)
T TIGR01668 51 WIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP------H--AVK--------PP---GCAFRRAHPEMGLTSEQ 110 (170)
T ss_pred HHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc------C--CCC--------CC---hHHHHHHHHHcCCCHHH
Confidence 345678889 999999998 7888888887 7765321 1 111 11 12223333344532 24
Q ss_pred eEEEeCCc-CcHHHHhccccC-eecC
Q 010860 190 DLGIGDRQ-TDHDFMSICKEG-YMVL 213 (499)
Q Consensus 190 ~~aygDS~-~D~pmL~~a~~~-~~Vn 213 (499)
++.+|||. .|+..-..+|-. +.|+
T Consensus 111 ~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 111 VAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred EEEECCcchHHHHHHHHcCCeEEEEc
Confidence 77889998 799888877753 4444
No 231
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=80.97 E-value=5.5 Score=40.76 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=58.9
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcC-----------CcEEEeCeE------------EEecCCCcee-ee---
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLG-----------GDKVLGTEI------------EVNPRTKRAT-GF--- 164 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg-----------~d~vigt~l------------~~~~~~g~~t-G~--- 164 (499)
+++.++++| ++.|+|.|+..+++.+.+..+| +|.||+..- +++..+|... +.
T Consensus 192 lL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~~~ 271 (343)
T TIGR02244 192 FLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLKWGEVDG 271 (343)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcccCCcccc
Confidence 334678899 9999999999999999998226 466665442 1110012110 11
Q ss_pred EecCCcccchhHHHHHHHHhCCCC-CeEEEeCCc-CcHHHHh-ccc-cCeecCC
Q 010860 165 VKRPGVLVGKWKKLAVLKEFGEDA-PDLGIGDRQ-TDHDFMS-ICK-EGYMVLP 214 (499)
Q Consensus 165 ~~~~~~~~g~~K~~~l~~~~~~~~-~~~aygDS~-~D~pmL~-~a~-~~~~Vnp 214 (499)
+.. +-++..|=+..+.+.+|... .++.+||+. +|+---. .+| ..++|-|
T Consensus 272 l~~-g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 272 LEP-GKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred ccC-CCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 111 11244556677777777433 466779998 7776554 333 3344544
No 232
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=80.76 E-value=0.77 Score=41.50 Aligned_cols=14 Identities=36% Similarity=0.586 Sum_probs=12.4
Q ss_pred EEEEecCCceeecC
Q 010860 22 SIAADLDGTLLVSR 35 (499)
Q Consensus 22 ~avFD~DgTL~~~~ 35 (499)
+++||+||||+.++
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 47999999999976
No 233
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=80.47 E-value=0.83 Score=41.84 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=23.0
Q ss_pred HHHHHHHHhCC-CEEEEeCC-cHHHHHHHHhhhcCCc
Q 010860 111 KESYEVFDKCE-RKVVVTAN-PTLMVEPFVKDFLGGD 145 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas-~~~~v~~ia~~~lg~d 145 (499)
++++++++++| ++.++|-+ ...+++.+.+. |+++
T Consensus 51 ~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~ 86 (169)
T PF12689_consen 51 PEILQELKERGVKLAVASRTDEPDWARELLKL-LEID 86 (169)
T ss_dssp HHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C
T ss_pred HHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCC
Confidence 44556788899 99999965 34588888888 8887
No 234
>COG3176 Putative hemolysin [General function prediction only]
Probab=80.10 E-value=2.9 Score=41.56 Aligned_cols=126 Identities=16% Similarity=0.074 Sum_probs=73.4
Q ss_pred HHHHHhhcEEEEEcCCCCCCCCCCCCCeEEEecCCCCChHHHHHHHhCCccceeeecccc-cccccccC---CeeEeec-
Q 010860 276 RYTYEMLGIHLVIRGNPPPAPSSGSPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSK-LSRFLSPI---PAIALTR- 350 (499)
Q Consensus 276 ~~~~~~~Gi~v~v~G~~~~p~~~~~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k-~~~~~~~~---~~i~i~R- 350 (499)
+.+...+|.++...+.+++|. +.+.++||||.-..|..+...+...-+... .++.. ...-..+. .-+.|+.
T Consensus 58 ~vf~~el~~~l~~~~~~~~~d---~d~fd~VcnHlgv~Dg~~~~d~~~~~vgty-R~l~~~~A~r~~~~ys~~ef~v~~~ 133 (292)
T COG3176 58 RVFSEELDARLDAAALERIPD---QDRFDIVCNHLGVRDGVIVADLLKQLVGTY-RLLANAQALRAGGFYSALEFPVDWL 133 (292)
T ss_pred hhhhhhcCcccccccccccCC---CCCeeEeccccceecccchhhhHhhhcCce-EEeehHHHHHhCCCccccccceeee
Confidence 445556788888888887654 579999999999999999987764332221 12221 00001111 2233333
Q ss_pred ---CCHHH----HHHHHHHhhCCC-EEEecCCeecC--CCccc--ccc----hhhhhcCCcEEEEEEeecc
Q 010860 351 ---DRAAD----AARISELLQKGD-LVVCPEGTTCR--ENFLL--RFS----ALFAEMSDRIVPVAVNCKQ 405 (499)
Q Consensus 351 ---~~~~~----~~~~~~~l~~G~-l~IFPEGTrt~--~~~l~--~Fk----~~~~~~~~pVvPV~I~~~~ 405 (499)
...+. .....+.+++|. |++||-|--.. .+++- +-+ ......+.++.|+.+++..
T Consensus 134 ~~~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r~ 204 (292)
T COG3176 134 EELRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGRN 204 (292)
T ss_pred cccChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccCcccCccccccccchhhcccccchhheeccc
Confidence 11112 223456678886 99999998752 22221 222 1223367899999999653
No 235
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=77.46 E-value=1.3 Score=39.74 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=13.1
Q ss_pred CeEEEEecCCceeec
Q 010860 20 YGSIAADLDGTLLVS 34 (499)
Q Consensus 20 ~~~avFD~DgTL~~~ 34 (499)
+++++||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999983
No 236
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=76.77 E-value=1.4 Score=37.97 Aligned_cols=14 Identities=43% Similarity=0.574 Sum_probs=12.2
Q ss_pred eEEEEecCCceeec
Q 010860 21 GSIAADLDGTLLVS 34 (499)
Q Consensus 21 ~~avFD~DgTL~~~ 34 (499)
|+++||+||||+.+
T Consensus 1 k~~~~D~dgtL~~~ 14 (132)
T TIGR01662 1 KGVVLDLDGTLTDD 14 (132)
T ss_pred CEEEEeCCCceecC
Confidence 57999999999963
No 237
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=75.55 E-value=0.21 Score=49.41 Aligned_cols=169 Identities=14% Similarity=0.072 Sum_probs=92.7
Q ss_pred CCCeEEEecCCCCChHHHHHHHhCCccceeeecccccccc-------cccC-CeeEeecCCHH-HH------HHHHHHhh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIALGRKVSCVTYSVSKLSRF-------LSPI-PAIALTRDRAA-DA------ARISELLQ 364 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~~~~~~~v~~~v~k~~~~-------~~~~-~~i~i~R~~~~-~~------~~~~~~l~ 364 (499)
+.+.=.++||.|+.|..+-+.+. ...|+++...+ +..+ |++.+.|..+. .+ ..++-...
T Consensus 185 d~t~edc~l~vs~gql~lpm~a~------l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvs 258 (412)
T KOG4666|consen 185 DRTGEDCSLHVSYGQLLLPMSAS------LPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVS 258 (412)
T ss_pred CCchHHHHHHHhhccEecccccc------hHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchh
Confidence 35677889999999986655432 12343331111 1111 44555442211 00 01111111
Q ss_pred C--CC-EEEecCCeecCCCcccccchhhhhcCCcEEEEEEeeccCCccccccCCcccccccccccC---CCCeEEEEEcc
Q 010860 365 K--GD-LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVNCKQNMFYGTTVRGVKFWDPYFFFMN---PRPTYEVTFLD 438 (499)
Q Consensus 365 ~--G~-l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~l~ 438 (499)
+ .+ +.+|||||++++....-|+++++..+-|+.|+.|.+..+.|+.. ..|..-.+-+..+++ --..++|..+-
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf 337 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLF 337 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccc
Confidence 2 14 89999999999998888999998899999999999998777433 222211111111111 11245555554
Q ss_pred ccCCcccccCCCCCHHHHHHHHHHHHHHhhCCcccCCCHHHHH
Q 010860 439 RLPEEMTCKAGGKSAIEVANYVQKVLGDVLGFECTGLTRKDKY 481 (499)
Q Consensus 439 pi~~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~~~~t~~dk~ 481 (499)
|-.. ++++.+-.+..+++-++..-.+..++.++-||.
T Consensus 338 ~~i~------q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~ 374 (412)
T KOG4666|consen 338 PSIE------QKDDPKIYASNFRKFAATEPNLALSELGYLDKR 374 (412)
T ss_pred hhhh------cccCcceeHHHHHHHHHhCchhhhhhhccccch
Confidence 4222 345666677777777666544444444444443
No 238
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=75.55 E-value=1.3 Score=39.93 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=31.9
Q ss_pred chhHHHHHHHHhCC----CC-CeEEEeCCcCcHHHHhccccC----eecCCCCC
Q 010860 173 GKWKKLAVLKEFGE----DA-PDLGIGDRQTDHDFMSICKEG----YMVLPSKS 217 (499)
Q Consensus 173 g~~K~~~l~~~~~~----~~-~~~aygDS~~D~pmL~~a~~~----~~Vnp~~~ 217 (499)
.+-|...|+..... .. ...+||+..+|..--+.+|-| +.|||..+
T Consensus 100 ~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~ 153 (157)
T PF08235_consen 100 EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGE 153 (157)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCe
Confidence 35677777765431 21 244899999999999999866 77787654
No 239
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=75.53 E-value=1.7 Score=38.48 Aligned_cols=17 Identities=24% Similarity=0.237 Sum_probs=14.4
Q ss_pred eEEEEecCCceeecCCc
Q 010860 21 GSIAADLDGTLLVSRSS 37 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s~ 37 (499)
++.+||+||||+.+.|.
T Consensus 1 ~~~~~d~dgtl~~~~~~ 17 (147)
T TIGR01656 1 PALFLDRDGVINEDTVS 17 (147)
T ss_pred CeEEEeCCCceeccCCc
Confidence 36799999999998774
No 240
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=75.46 E-value=1.6 Score=43.40 Aligned_cols=33 Identities=12% Similarity=-0.030 Sum_probs=27.1
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK 146 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~ 146 (499)
++++++++| .+.|+|.+.+..++.+.+. +|++.
T Consensus 156 tL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~ 189 (303)
T PHA03398 156 SLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEG 189 (303)
T ss_pred HHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCc
Confidence 445678889 9999998888888999998 88863
No 241
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=75.41 E-value=1.6 Score=40.59 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=20.1
Q ss_pred HHHHHHHhCC-CEEEEeCCcHH-------HHHHHHhhhcC
Q 010860 112 ESYEVFDKCE-RKVVVTANPTL-------MVEPFVKDFLG 143 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~-------~v~~ia~~~lg 143 (499)
++++.+.+.| .+++||+++.. .-..|.++++|
T Consensus 80 e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~ 119 (191)
T PF06941_consen 80 EALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFP 119 (191)
T ss_dssp HHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcC
Confidence 3444678899 88888877543 23456666566
No 242
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=73.29 E-value=1.8 Score=35.89 Aligned_cols=17 Identities=35% Similarity=0.573 Sum_probs=13.4
Q ss_pred EEEecCCceeecCCchH
Q 010860 23 IAADLDGTLLVSRSSFP 39 (499)
Q Consensus 23 avFD~DgTL~~~~s~~~ 39 (499)
.+||+||||+.++...+
T Consensus 1 ~l~D~dGvl~~g~~~ip 17 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIP 17 (101)
T ss_dssp EEEESTTTSEETTEE-T
T ss_pred CEEeCccEeEeCCCcCc
Confidence 48999999999876544
No 243
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=71.98 E-value=2.1 Score=39.40 Aligned_cols=23 Identities=13% Similarity=-0.175 Sum_probs=16.5
Q ss_pred CeEEEeCCcCcHHHHhccccCee
Q 010860 189 PDLGIGDRQTDHDFMSICKEGYM 211 (499)
Q Consensus 189 ~~~aygDS~~D~pmL~~a~~~~~ 211 (499)
.++++|||..|+.--..+|-.++
T Consensus 132 e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 132 QILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred HeEEEcChhHhHHHHHHhCCEEE
Confidence 47788999999777666655443
No 244
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=71.43 E-value=2.1 Score=39.58 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=13.5
Q ss_pred CeEEEEecCCceeec
Q 010860 20 YGSIAADLDGTLLVS 34 (499)
Q Consensus 20 ~~~avFD~DgTL~~~ 34 (499)
-++.+||+||||+++
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 579999999999985
No 245
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=70.30 E-value=6.3 Score=37.13 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=29.7
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEe
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLG 149 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vig 149 (499)
+++.++++| +++++||-+...++++++. |+++ .+|+
T Consensus 26 ~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~~i~ 63 (215)
T TIGR01487 26 AIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGPVVA 63 (215)
T ss_pred HHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCcEEE
Confidence 344578889 9999999999999999998 9987 4554
No 246
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=69.68 E-value=2.8 Score=37.61 Aligned_cols=15 Identities=27% Similarity=0.408 Sum_probs=13.8
Q ss_pred eEEEEecCCceeecC
Q 010860 21 GSIAADLDGTLLVSR 35 (499)
Q Consensus 21 ~~avFD~DgTL~~~~ 35 (499)
++.+||+||||+++.
T Consensus 9 kLli~DVDGvLTDG~ 23 (170)
T COG1778 9 KLLILDVDGVLTDGK 23 (170)
T ss_pred eEEEEeccceeecCe
Confidence 699999999999984
No 247
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=68.14 E-value=31 Score=33.76 Aligned_cols=92 Identities=12% Similarity=0.076 Sum_probs=53.9
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhh--cCCcEEEeC---eEEE-----ecC-CC--c-eeeeEecCCcccchh
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFVKDF--LGGDKVLGT---EIEV-----NPR-TK--R-ATGFVKRPGVLVGKW 175 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~--lg~d~vigt---~l~~-----~~~-~g--~-~tG~~~~~~~~~g~~ 175 (499)
|+.++.++++| .|+-+|+-+..+.....++. +|+|---++ +..+ .+. ++ . ..|-+- +-|..
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf----t~~~~ 162 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF----TGGQD 162 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE----eCCCc
Confidence 66777899999 99999999877766666542 677521121 1000 000 00 0 123222 35778
Q ss_pred HHHHHHHHhCC---CC-CeEEEeCCcCcHHHHhcc
Q 010860 176 KKLAVLKEFGE---DA-PDLGIGDRQTDHDFMSIC 206 (499)
Q Consensus 176 K~~~l~~~~~~---~~-~~~aygDS~~D~pmL~~a 206 (499)
|...|..++.. .. ..++..|+...+.=++.+
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHH
Confidence 88888888742 22 356889888766555533
No 248
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=66.50 E-value=9.8 Score=35.91 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=26.9
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++.++++| .++++||-+...++++++. +|++
T Consensus 25 l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 25 LTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 34467789 9999999999999999999 9976
No 249
>PLN02580 trehalose-phosphatase
Probab=66.37 E-value=1.8 Score=44.95 Aligned_cols=57 Identities=23% Similarity=0.191 Sum_probs=35.1
Q ss_pred EEEecCCCceeeeEecCCcccchhHHHHHHHHhCC---C-C-C--eEEEeCCcCcHHHHhcc-----ccCeecC
Q 010860 152 IEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE---D-A-P--DLGIGDRQTDHDFMSIC-----KEGYMVL 213 (499)
Q Consensus 152 l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~---~-~-~--~~aygDS~~D~pmL~~a-----~~~~~Vn 213 (499)
+.+. .|+..=++..+ .|-.|...++..+.. . . . .+++||+.||.+||+.. +..++|.
T Consensus 283 l~v~--~Gk~vlEVrP~---~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 283 LRLT--HGRKVLEVRPV---IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred eEEE--eCCeEEEEecC---CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 4444 55543344321 355787777766532 1 1 1 26889999999999974 5566665
No 250
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=65.81 E-value=18 Score=38.43 Aligned_cols=92 Identities=20% Similarity=0.169 Sum_probs=51.3
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC------------cEEEeCe-----------E-EEecCCCce-----e
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG------------DKVLGTE-----------I-EVNPRTKRA-----T 162 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~------------d~vigt~-----------l-~~~~~~g~~-----t 162 (499)
.++.+|++| ++.|+|.|+-.++..++...+|- |-||..- + +++..+|.+ +
T Consensus 191 ~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~~ 270 (448)
T PF05761_consen 191 WLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKLKWGKYV 270 (448)
T ss_dssp HHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSEECS---
T ss_pred HHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcccccccc
Confidence 344688999 99999999999999998865665 4444321 1 122013332 2
Q ss_pred eeEecCCcccchhHHHHHHHHhCCCC-CeEEEeCCc-CcHHHHhc
Q 010860 163 GFVKRPGVLVGKWKKLAVLKEFGEDA-PDLGIGDRQ-TDHDFMSI 205 (499)
Q Consensus 163 G~~~~~~~~~g~~K~~~l~~~~~~~~-~~~aygDS~-~D~pmL~~ 205 (499)
+.+.. +-++-.|=+..+.+..|..+ ..+.+||+. +|+--...
T Consensus 271 ~~l~~-g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~ 314 (448)
T PF05761_consen 271 GPLEK-GKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKK 314 (448)
T ss_dssp SS--T-C-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHH
T ss_pred ccccC-CCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhcc
Confidence 22332 12255566677787777433 355779998 88865443
No 251
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=65.72 E-value=3.5 Score=36.85 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=17.8
Q ss_pred CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 122 RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 122 ~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
+++|.|++.+.+++++.+. +.-
T Consensus 53 ev~i~T~~~~~ya~~v~~~-ldp 74 (159)
T PF03031_consen 53 EVVIWTSASEEYAEPVLDA-LDP 74 (159)
T ss_dssp EEEEE-SS-HHHHHHHHHH-HTT
T ss_pred eEEEEEeehhhhhhHHHHh-hhh
Confidence 7899999999999999998 664
No 252
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=65.00 E-value=4.8 Score=39.64 Aligned_cols=25 Identities=4% Similarity=0.104 Sum_probs=20.6
Q ss_pred CC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 120 CE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 120 ~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
.| .++|+||-+..-++.+++. +++.
T Consensus 52 ~g~~v~i~SGR~~~~~~~~~~~-~~~~ 77 (266)
T PRK10187 52 NDGALALISGRSMVELDALAKP-YRFP 77 (266)
T ss_pred CCCcEEEEeCCCHHHHHHhcCc-ccce
Confidence 57 8999999998888888877 6653
No 253
>PRK10444 UMP phosphatase; Provisional
Probab=64.56 E-value=3.9 Score=39.88 Aligned_cols=19 Identities=26% Similarity=0.611 Sum_probs=15.2
Q ss_pred eEEEEecCCceeecCCchH
Q 010860 21 GSIAADLDGTLLVSRSSFP 39 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s~~~ 39 (499)
+..+||+||||+.++..++
T Consensus 2 ~~v~~DlDGtL~~~~~~~p 20 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVP 20 (248)
T ss_pred cEEEEeCCCceEeCCeeCc
Confidence 4789999999999875433
No 254
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=64.42 E-value=4.3 Score=36.81 Aligned_cols=17 Identities=29% Similarity=0.315 Sum_probs=14.5
Q ss_pred CeEEEEecCCceeecCC
Q 010860 20 YGSIAADLDGTLLVSRS 36 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s 36 (499)
.++++||.||||+...+
T Consensus 1 ~~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPP 17 (161)
T ss_pred CCEEEEeCCCCccccCC
Confidence 36899999999999655
No 255
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=63.81 E-value=4.6 Score=37.02 Aligned_cols=16 Identities=31% Similarity=0.395 Sum_probs=13.8
Q ss_pred CCeEEEEecCCceeec
Q 010860 19 AYGSIAADLDGTLLVS 34 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~ 34 (499)
++|+++||.||||+..
T Consensus 2 ~~~~~~~d~~~t~~~~ 17 (181)
T PRK08942 2 SMKAIFLDRDGVINVD 17 (181)
T ss_pred CccEEEEECCCCcccC
Confidence 4689999999999774
No 256
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=63.25 E-value=15 Score=36.79 Aligned_cols=16 Identities=31% Similarity=0.403 Sum_probs=12.5
Q ss_pred CCeEEEEecCCceeec
Q 010860 19 AYGSIAADLDGTLLVS 34 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~ 34 (499)
.+++++||+||||+..
T Consensus 125 ~~kvIvFDLDgTLi~~ 140 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD 140 (301)
T ss_pred cceEEEEecCCCCcCC
Confidence 5678888888888884
No 257
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism]
Probab=63.17 E-value=11 Score=33.98 Aligned_cols=114 Identities=19% Similarity=0.284 Sum_probs=64.2
Q ss_pred EEEcCCCCCCCCCCCCCeEEEecCCC-CChHHHHHHHh--CCc--ccee-eecccccccccccCCeeEeecCCHHHHHHH
Q 010860 286 LVIRGNPPPAPSSGSPGNLYVCNHRT-PLDPIVIAIAL--GRK--VSCV-TYSVSKLSRFLSPIPAIALTRDRAADAARI 359 (499)
Q Consensus 286 v~v~G~~~~p~~~~~~p~iiVaNH~S-~lD~~~l~~~~--~~~--~~~v-~~~v~k~~~~~~~~~~i~i~R~~~~~~~~~ 359 (499)
++|.|.||.|. ++|.++|--|-. .+|...+.+-+ .+. +-.+ ..|+.|++.+-.-...+.+ +...++.|
T Consensus 32 yeviglenvpq---egpalivyyhgaipidmyylnsrmllqrerliytigdrflfklpgwgtiseafhv---spgtvqsc 105 (279)
T KOG4321|consen 32 YEVIGLENVPQ---EGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKLPGWGTISEAFHV---SPGTVQSC 105 (279)
T ss_pred eeEeecccCCC---cCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeCCCccchhhhhcc---CCccHHHH
Confidence 58889999986 589999999865 46766666543 111 1011 1234443322100011112 12456788
Q ss_pred HHHhhCCC-EEEecCCeecCC--Cc---cc-c----cchhhhhcCCcEEEEEEeecc
Q 010860 360 SELLQKGD-LVVCPEGTTCRE--NF---LL-R----FSALFAEMSDRIVPVAVNCKQ 405 (499)
Q Consensus 360 ~~~l~~G~-l~IFPEGTrt~~--~~---l~-~----Fk~~~~~~~~pVvPV~I~~~~ 405 (499)
...+++|+ +.|-|-|.-... .. ++ + |.+.+.++..||+|-.-.+-+
T Consensus 106 vsilrdgnllaispggvyeaqfgdhyyellwrnrvgfakvaieakapiipcftqnlr 162 (279)
T KOG4321|consen 106 VSILRDGNLLAISPGGVYEAQFGDHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLR 162 (279)
T ss_pred HHhhccCcEEEEcCCceeeeccchHHHHHHHhccccceeeeeecCCCccchhHHHHH
Confidence 88999998 889888876532 11 11 1 222233467899887655443
No 258
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=62.88 E-value=4.6 Score=39.54 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.8
Q ss_pred eEEEEecCCceeecCC
Q 010860 21 GSIAADLDGTLLVSRS 36 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s 36 (499)
++.+||+||||+.++.
T Consensus 2 k~i~~D~DGtl~~~~~ 17 (257)
T TIGR01458 2 KGVLLDISGVLYISDA 17 (257)
T ss_pred CEEEEeCCCeEEeCCC
Confidence 5789999999999755
No 259
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=62.53 E-value=6.4 Score=40.95 Aligned_cols=18 Identities=28% Similarity=0.429 Sum_probs=15.3
Q ss_pred CCeEEEEecCCceeecCC
Q 010860 19 AYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s 36 (499)
..+++++|+||||+.+|-
T Consensus 374 n~kiVVsDiDGTITkSD~ 391 (580)
T COG5083 374 NKKIVVSDIDGTITKSDA 391 (580)
T ss_pred CCcEEEEecCCcEEehhh
Confidence 467999999999999754
No 260
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=62.27 E-value=12 Score=36.16 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=25.7
Q ss_pred chhHHHHHHHHhCC----CCCeEEEeCCcCcHHHHhcc
Q 010860 173 GKWKKLAVLKEFGE----DAPDLGIGDRQTDHDFMSIC 206 (499)
Q Consensus 173 g~~K~~~l~~~~~~----~~~~~aygDS~~D~pmL~~a 206 (499)
+..|...++..+.. ....++.||+.+|.+|++.+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHH
Confidence 55677777766532 22467899999999999988
No 261
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=62.15 E-value=4.4 Score=39.44 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=14.5
Q ss_pred eEEEEecCCceeecCCc
Q 010860 21 GSIAADLDGTLLVSRSS 37 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s~ 37 (499)
+..+||+||||+.++..
T Consensus 2 ~~~~~D~DGtl~~~~~~ 18 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKER 18 (249)
T ss_pred CEEEEeCCCceEcCCee
Confidence 57899999999998654
No 262
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=60.86 E-value=4.9 Score=36.72 Aligned_cols=14 Identities=36% Similarity=0.482 Sum_probs=12.3
Q ss_pred eEEEEecCCceeec
Q 010860 21 GSIAADLDGTLLVS 34 (499)
Q Consensus 21 ~~avFD~DgTL~~~ 34 (499)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999963
No 263
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=60.75 E-value=4.7 Score=39.90 Aligned_cols=19 Identities=26% Similarity=0.426 Sum_probs=15.3
Q ss_pred eEEEEecCCceeecCCchH
Q 010860 21 GSIAADLDGTLLVSRSSFP 39 (499)
Q Consensus 21 ~~avFD~DgTL~~~~s~~~ 39 (499)
++.+||+||||+.++..++
T Consensus 3 ~~~~~D~DGtl~~~~~~~~ 21 (279)
T TIGR01452 3 QGFIFDCDGVLWLGERVVP 21 (279)
T ss_pred cEEEEeCCCceEcCCeeCc
Confidence 5789999999999765443
No 264
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=60.61 E-value=4.9 Score=36.75 Aligned_cols=15 Identities=20% Similarity=0.313 Sum_probs=13.6
Q ss_pred CeEEEEecCCceeec
Q 010860 20 YGSIAADLDGTLLVS 34 (499)
Q Consensus 20 ~~~avFD~DgTL~~~ 34 (499)
-++.+||+||||+++
T Consensus 7 i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 7 IKLVILDVDGVMTDG 21 (169)
T ss_pred CeEEEEeCceeeECC
Confidence 468999999999997
No 265
>PLN02645 phosphoglycolate phosphatase
Probab=59.92 E-value=5.3 Score=40.31 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.6
Q ss_pred CCeEEEEecCCceeecCCc
Q 010860 19 AYGSIAADLDGTLLVSRSS 37 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s~ 37 (499)
..++.+||+||||+.++..
T Consensus 27 ~~~~~~~D~DGtl~~~~~~ 45 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKL 45 (311)
T ss_pred hCCEEEEeCcCCeEeCCcc
Confidence 3578999999999997643
No 266
>PLN03017 trehalose-phosphatase
Probab=59.26 E-value=3.1 Score=42.90 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=32.3
Q ss_pred EEEecCCCceeeeEecCCcccchhHHHHHHHHhCC---C----CCeEEEeCCcCcHHHHhccc
Q 010860 152 IEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE---D----APDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 152 l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~---~----~~~~aygDS~~D~pmL~~a~ 207 (499)
+.+. .|+..=++.. . .+-.|-.+++.++.. . ...++.||-.+|-.+++...
T Consensus 265 l~v~--~GkkVlEvRP--~-~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~ 322 (366)
T PLN03017 265 LKLT--QGRKVFEIRP--M-IEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLR 322 (366)
T ss_pred cEEe--CCCeEEEecC--C-CCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHh
Confidence 4555 6665544443 1 355677777766532 1 12467899999999999774
No 267
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=58.45 E-value=16 Score=35.53 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=43.7
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcE-EEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHh
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDK-VLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEF 184 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~-vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~ 184 (499)
++.++++| +++|+||-+-.-+.++.+. ||.+. +||..=...- +. |++..... ....-+..+-++.
T Consensus 29 l~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~-~~---~~~i~~~~-l~~~~~~~i~~~~ 95 (264)
T COG0561 29 LARLREKGVKVVLATGRPLPDVLSILEE-LGLDGPLITFNGALIY-NG---GELLFQKP-LSREDVEELLELL 95 (264)
T ss_pred HHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCccEEEeCCeEEe-cC---CcEEeeec-CCHHHHHHHHHHH
Confidence 44578889 9999999999999999999 99984 5543322210 11 55544232 5566667777665
No 268
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=57.42 E-value=9.2 Score=43.14 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=30.2
Q ss_pred cHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 110 RKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 110 ~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
-|+++...|++| ++++|||--....+.+|+. .|+
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgI 629 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGI 629 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhh-eee
Confidence 467777899999 9999999999999999999 784
No 269
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=56.96 E-value=17 Score=35.13 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=42.3
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEeCeEE-EecCCCceeeeEecCCcccchhHHHHHHHHhC
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLGTEIE-VNPRTKRATGFVKRPGVLVGKWKKLAVLKEFG 185 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vigt~l~-~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~ 185 (499)
++.++++| +++++||-+...++++.++ +|++ .+||..=. +.+ . .|++..... ...+.++.+-+.+.
T Consensus 25 i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~~~I~~NGa~i~~-~---~~~~i~~~~-i~~~~~~~i~~~~~ 93 (256)
T TIGR00099 25 LAKLREKGIKVVLATGRPYKEVKNILKE-LGLDTPFITANGAAVID-D---QGEILYKKP-LDLDLVEEILNFLK 93 (256)
T ss_pred HHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCCCEEEcCCcEEEC-C---CCCEEeecC-CCHHHHHHHHHHHH
Confidence 34567789 9999999999999999999 9987 55543321 221 1 123332122 45667777776654
No 270
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=56.69 E-value=6.4 Score=38.13 Aligned_cols=15 Identities=33% Similarity=0.248 Sum_probs=12.8
Q ss_pred CeEEEEecCCceeec
Q 010860 20 YGSIAADLDGTLLVS 34 (499)
Q Consensus 20 ~~~avFD~DgTL~~~ 34 (499)
.++.+||+||||.+.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 467899999999973
No 271
>PLN02151 trehalose-phosphatase
Probab=56.34 E-value=3.8 Score=42.08 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=32.4
Q ss_pred EEEecCCCceeeeEecCCcccchhHHHHHHHHhCC---C----CCeEEEeCCcCcHHHHhccc
Q 010860 152 IEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE---D----APDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 152 l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~---~----~~~~aygDS~~D~pmL~~a~ 207 (499)
+.+. .|+..=++.. . .+-.|-.+++..+.. . ...++.||-.+|-.+++...
T Consensus 251 l~v~--~GkkVvEvrP--~-~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~ 308 (354)
T PLN02151 251 LMLT--QGRKVLEIRP--I-IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILR 308 (354)
T ss_pred cEEe--cCCEEEEEeC--C-CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHh
Confidence 4555 6765545543 1 355677777766532 1 12467899999999999764
No 272
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=55.94 E-value=1.3e+02 Score=29.19 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=19.8
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
++++++|++| .+.++|=..+ -.+.+... +|+
T Consensus 120 ~~lq~lR~~g~~l~iisN~d~-r~~~~l~~-~~l 151 (237)
T KOG3085|consen 120 ELLQKLRKKGTILGIISNFDD-RLRLLLLP-LGL 151 (237)
T ss_pred HHHHHHHhCCeEEEEecCCcH-HHHHHhhc-cCH
Confidence 4555789999 6777775544 44455555 664
No 273
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=55.83 E-value=6.7 Score=38.72 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=18.7
Q ss_pred CeEEEEecCCceeecCCchHHHH
Q 010860 20 YGSIAADLDGTLLVSRSSFPYFM 42 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s~~~~~~ 42 (499)
.+..+||+||||+.++..++.-.
T Consensus 8 y~~~l~DlDGvl~~G~~~ipga~ 30 (269)
T COG0647 8 YDGFLFDLDGVLYRGNEAIPGAA 30 (269)
T ss_pred cCEEEEcCcCceEeCCccCchHH
Confidence 45799999999999988776433
No 274
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=55.34 E-value=9.9 Score=38.53 Aligned_cols=18 Identities=28% Similarity=0.541 Sum_probs=14.5
Q ss_pred EEEEecCCceeecCCchH
Q 010860 22 SIAADLDGTLLVSRSSFP 39 (499)
Q Consensus 22 ~avFD~DgTL~~~~s~~~ 39 (499)
..+||+||||+.++...+
T Consensus 2 ~~ifD~DGvL~~g~~~i~ 19 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIA 19 (321)
T ss_pred EEEEeCcCceECCccccH
Confidence 468999999999866543
No 275
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=55.13 E-value=23 Score=35.40 Aligned_cols=16 Identities=38% Similarity=0.399 Sum_probs=12.9
Q ss_pred CCeEEEEecCCceeec
Q 010860 19 AYGSIAADLDGTLLVS 34 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~ 34 (499)
.+++++||+||||+..
T Consensus 127 ~~~~i~~D~D~TL~~~ 142 (303)
T PHA03398 127 IPHVIVFDLDSTLITD 142 (303)
T ss_pred eccEEEEecCCCccCC
Confidence 5678888888888885
No 276
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=53.17 E-value=13 Score=42.19 Aligned_cols=42 Identities=29% Similarity=0.169 Sum_probs=29.8
Q ss_pred cchhHHHHHHHHhCC--CCCeEEEeCCcCcHHHHhcc---ccCeecC
Q 010860 172 VGKWKKLAVLKEFGE--DAPDLGIGDRQTDHDFMSIC---KEGYMVL 213 (499)
Q Consensus 172 ~g~~K~~~l~~~~~~--~~~~~aygDS~~D~pmL~~a---~~~~~Vn 213 (499)
.|-+|...++..+.. ....+++||+.||.+||+.+ +.++.|.
T Consensus 654 ~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG 700 (726)
T PRK14501 654 AGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG 700 (726)
T ss_pred CCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC
Confidence 355788888776632 12467899999999999986 3455554
No 277
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=52.43 E-value=23 Score=33.23 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=27.6
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCC-cEEEe
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGG-DKVLG 149 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~-d~vig 149 (499)
+.+|++| .++++||-+...++++++. +|. +.+|+
T Consensus 25 ~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~~~i~ 60 (225)
T TIGR01482 25 RKAESVGIPVVLVTGNSVQFARALAKL-IGTPDPVIA 60 (225)
T ss_pred HHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCeEEE
Confidence 3467789 9999999999999999998 885 44554
No 278
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=50.98 E-value=13 Score=33.67 Aligned_cols=24 Identities=21% Similarity=0.230 Sum_probs=21.6
Q ss_pred CEEEEeCCcHHHHHHHHhhhcCCcE
Q 010860 122 RKVVVTANPTLMVEPFVKDFLGGDK 146 (499)
Q Consensus 122 ~vvlvSas~~~~v~~ia~~~lg~d~ 146 (499)
+++|.|++.+.+++++++. ++.+.
T Consensus 59 ei~I~Ts~~~~yA~~il~~-ldp~~ 82 (162)
T TIGR02251 59 ELVIFTASLEEYADPVLDI-LDRGG 82 (162)
T ss_pred EEEEEcCCcHHHHHHHHHH-HCcCC
Confidence 8999999999999999998 88653
No 279
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=50.83 E-value=25 Score=33.56 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=28.1
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEe
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLG 149 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vig 149 (499)
++.++++| .++++||-+..-+.+++++ +|++ .+|+
T Consensus 24 i~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~~I~ 60 (225)
T TIGR02461 24 LEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPPFIV 60 (225)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCcEEE
Confidence 34567789 9999999998889999999 9974 4554
No 280
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=50.70 E-value=26 Score=33.98 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=28.8
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEeCe
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLGTE 151 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vigt~ 151 (499)
+.++++| .++++||-+...+.++++. +|++ .+||..
T Consensus 26 ~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~~~I~~N 63 (256)
T TIGR01486 26 ERLQELGIPVIPCTSKTAAEVEYLRKE-LGLEDPFIVEN 63 (256)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCcEEEcC
Confidence 3466779 9999999999999999999 9974 455443
No 281
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=50.51 E-value=6.8 Score=37.77 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=13.1
Q ss_pred EEEecCCceeecCCch
Q 010860 23 IAADLDGTLLVSRSSF 38 (499)
Q Consensus 23 avFD~DgTL~~~~s~~ 38 (499)
.+||+||||++++..+
T Consensus 1 ~lfD~DGvL~~~~~~~ 16 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPI 16 (236)
T ss_pred CEEeCcCccCcCCccC
Confidence 3799999999987643
No 282
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=49.46 E-value=27 Score=34.28 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=26.8
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++.++++| +++++||-+...+.+++++ +|++
T Consensus 30 i~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~ 61 (273)
T PRK00192 30 LKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLE 61 (273)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCC
Confidence 44567789 9999999999999999999 9975
No 283
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=48.13 E-value=32 Score=31.35 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=32.3
Q ss_pred ccHHHHHH---HHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEe
Q 010860 109 VRKESYEV---FDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLG 149 (499)
Q Consensus 109 i~~~~~~~---~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vig 149 (499)
..||+.+| ++++| +++|+|-..+.=|+.+++. ||++.+..
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~fi~~ 90 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVPFIYR 90 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCceeec
Confidence 44666653 67899 9999999999999999999 99986543
No 284
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=45.74 E-value=11 Score=38.76 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=31.3
Q ss_pred CeeEeecCC----HHHHHHHHHHhhCCC-EEEecCCeecCCCcccccchhhhhcCCcEEEEEEe
Q 010860 344 PAIALTRDR----AADAARISELLQKGD-LVVCPEGTTCRENFLLRFSALFAEMSDRIVPVAVN 402 (499)
Q Consensus 344 ~~i~i~R~~----~~~~~~~~~~l~~G~-l~IFPEGTrt~~~~l~~Fk~~~~~~~~pVvPV~I~ 402 (499)
|.+.++++- ..-+.+..+.++.|. |+| .-|+-....-..+...+.+.++|+-=..+.
T Consensus 294 ~y~~vn~d~lg~~~~C~~~~~e~l~~~~sVvi--dnt~pd~~sr~~~~~~a~e~~~p~rcf~~~ 355 (422)
T KOG2134|consen 294 GYKIVNADTLGTPQNCLLANAEALKHGKSVVI--DNTNPDAESRKYYLDCATEREIPIRCFEMN 355 (422)
T ss_pred ceeEeecccCCCchhhHHHHHHHhhcccEEee--CCCCcchHHHHHHhhhHHHhCccceeeeec
Confidence 666677643 345667788899995 887 223222112223334455566666544443
No 285
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=44.57 E-value=16 Score=33.39 Aligned_cols=32 Identities=25% Similarity=0.251 Sum_probs=22.8
Q ss_pred CCCCCCCccccCCCC-------CeEEEEecCCceeecCC
Q 010860 5 PGRKFPPITECNGSA-------YGSIAADLDGTLLVSRS 36 (499)
Q Consensus 5 ~~~~~~~~~~~~~~~-------~~~avFD~DgTL~~~~s 36 (499)
|--.+|+|...+-.. =+..+||+|+||+..++
T Consensus 19 P~l~V~si~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~ 57 (168)
T PF09419_consen 19 PHLYVPSIRDIDFEANHLKKKGIKALIFDKDNTLTPPYE 57 (168)
T ss_pred CCEEcCChhhCCcchhhhhhcCceEEEEcCCCCCCCCCc
Confidence 555667777665433 36899999999998544
No 286
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=44.16 E-value=15 Score=36.39 Aligned_cols=29 Identities=14% Similarity=0.007 Sum_probs=20.0
Q ss_pred HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 116 VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 116 ~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++++.| .+++=|-+....|..-+++ ++++
T Consensus 153 ~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~ 182 (297)
T PF05152_consen 153 ELKEQGCVLVLWSYGNREHVRHSLKE-LKLE 182 (297)
T ss_pred HHHHcCCEEEEecCCCHHHHHHHHHH-hCCc
Confidence 456677 6777777777777777777 6654
No 287
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=43.65 E-value=35 Score=32.12 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=29.4
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc-EEEeC
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGD-KVLGT 150 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d-~vigt 150 (499)
++.++++| .++++||=+...+.++.+. ++++ .+|+.
T Consensus 24 l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~~~~I~~ 61 (254)
T PF08282_consen 24 LKELQEKGIKLVIATGRSYSSIKRLLKE-LGIDDYFICS 61 (254)
T ss_dssp HHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHCSEEEEG
T ss_pred HHhhcccceEEEEEccCccccccccccc-ccchhhhccc
Confidence 34467789 9999999999999999998 9986 66653
No 288
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=43.60 E-value=21 Score=33.54 Aligned_cols=22 Identities=23% Similarity=0.231 Sum_probs=20.0
Q ss_pred CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 122 RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 122 ~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
.|+|=|||...|++++.++ +|+
T Consensus 62 eIvVwTAa~~~ya~~~l~~-l~~ 83 (195)
T TIGR02245 62 DIVIWSATSMKWIEIKMTE-LGV 83 (195)
T ss_pred EEEEEecCCHHHHHHHHHH-hcc
Confidence 7899999999999999998 875
No 289
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=42.95 E-value=15 Score=33.29 Aligned_cols=15 Identities=40% Similarity=0.512 Sum_probs=13.0
Q ss_pred eEEEEecCCceeecC
Q 010860 21 GSIAADLDGTLLVSR 35 (499)
Q Consensus 21 ~~avFD~DgTL~~~~ 35 (499)
+..|+|+|+||+++.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 478999999999964
No 290
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=41.90 E-value=17 Score=32.24 Aligned_cols=15 Identities=40% Similarity=0.512 Sum_probs=13.1
Q ss_pred eEEEEecCCceeecC
Q 010860 21 GSIAADLDGTLLVSR 35 (499)
Q Consensus 21 ~~avFD~DgTL~~~~ 35 (499)
.+.++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 478999999999973
No 291
>PLN02382 probable sucrose-phosphatase
Probab=41.73 E-value=18 Score=38.11 Aligned_cols=22 Identities=32% Similarity=0.351 Sum_probs=16.8
Q ss_pred ccCCCCCeEEEEecCCceeecC
Q 010860 14 ECNGSAYGSIAADLDGTLLVSR 35 (499)
Q Consensus 14 ~~~~~~~~~avFD~DgTL~~~~ 35 (499)
.+.+.+.-+.+-||||||++.+
T Consensus 3 ~~~~~~~~lI~sDLDGTLL~~~ 24 (413)
T PLN02382 3 RLSGSPRLMIVSDLDHTMVDHH 24 (413)
T ss_pred cccCCCCEEEEEcCCCcCcCCC
Confidence 4556666778889999999853
No 292
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=41.18 E-value=20 Score=32.23 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=30.8
Q ss_pred ccHHHHHHHH--hCC-CEEEEeCCcHHHHHHHHhhhcCCcE-EEeCeE
Q 010860 109 VRKESYEVFD--KCE-RKVVVTANPTLMVEPFVKDFLGGDK-VLGTEI 152 (499)
Q Consensus 109 i~~~~~~~~~--~~G-~vvlvSas~~~~v~~ia~~~lg~d~-vigt~l 152 (499)
+||.+.+.++ +++ .++|+|++...+++++++. ++.++ .++.++
T Consensus 59 ~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri 105 (156)
T TIGR02250 59 LRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRI 105 (156)
T ss_pred ECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEE
Confidence 4555554332 256 8999999999999999999 88774 444443
No 293
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=41.11 E-value=16 Score=36.10 Aligned_cols=36 Identities=25% Similarity=0.171 Sum_probs=26.3
Q ss_pred chhHHHHHHHHhCCCC----CeEEEeCCcCcHHHHhcccc
Q 010860 173 GKWKKLAVLKEFGEDA----PDLGIGDRQTDHDFMSICKE 208 (499)
Q Consensus 173 g~~K~~~l~~~~~~~~----~~~aygDS~~D~pmL~~a~~ 208 (499)
|-.|...++...+... ..++.||-..|=.+++.+.+
T Consensus 180 ~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~ 219 (266)
T COG1877 180 GVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNK 219 (266)
T ss_pred CcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhcc
Confidence 4558888876655321 24577999999999999886
No 294
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=40.96 E-value=1e+02 Score=31.06 Aligned_cols=78 Identities=12% Similarity=-0.026 Sum_probs=47.3
Q ss_pred HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhh---cCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH---h
Q 010860 112 ESYEVFDKCE-RKVVVTANPTLMVEPFVKDF---LGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE---F 184 (499)
Q Consensus 112 ~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~---lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~---~ 184 (499)
+.++.++++| .+.|+|.+....+..+.+.+ +|+... +. ....+ + ..|...+++. +
T Consensus 38 e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~----f~---------~~~~~----~-~pk~~~i~~~~~~l 99 (320)
T TIGR01686 38 EKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED----FD---------ARSIN----W-GPKSESLRKIAKKL 99 (320)
T ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH----ee---------EEEEe----c-CchHHHHHHHHHHh
Confidence 4455678899 99999999988888877651 222110 11 10000 1 1255545443 4
Q ss_pred CC-CCCeEEEeCCcCcHHHHhccc
Q 010860 185 GE-DAPDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 185 ~~-~~~~~aygDS~~D~pmL~~a~ 207 (499)
+. ...++++|||..|+..-+.+.
T Consensus 100 ~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 100 NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred CCCcCcEEEECCCHHHHHHHHHHC
Confidence 42 235778999999998887654
No 295
>PLN02580 trehalose-phosphatase
Probab=40.55 E-value=53 Score=34.23 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=18.1
Q ss_pred CCCccccCCCCCeEEEEecCCceeec
Q 010860 9 FPPITECNGSAYGSIAADLDGTLLVS 34 (499)
Q Consensus 9 ~~~~~~~~~~~~~~avFD~DgTL~~~ 34 (499)
|+.|.........+.|+|+||||.+-
T Consensus 108 ~~~~~~~~~~k~~~LfLDyDGTLaPI 133 (384)
T PLN02580 108 FEQIANFAKGKKIALFLDYDGTLSPI 133 (384)
T ss_pred HHHHHHHhhcCCeEEEEecCCccCCC
Confidence 44444444456678888999999863
No 296
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
Probab=40.35 E-value=94 Score=30.50 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHhhhHHHhhccHHHHH-HHHhCC-CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 88 LKIRDIELASRAVLPRFYAADVRKESYE-VFDKCE-RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~i~~~~~~-~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
+..+++.++|+..+...+ ..+ .+.++ ..+..| ..|+.+|--+++++.-|++ +|++
T Consensus 246 lg~~~v~d~A~~~~~~~l-~~l-~e~I~~~a~r~gL~~Vv~~GlGefLi~~A~~~-lg~e 302 (330)
T COG1548 246 LGEEEVIDLAEKAYNALL-ELL-AENIEEKAKRYGLNTVVATGLGEFLIQEACKR-LGYE 302 (330)
T ss_pred cChhHHHHHHHHHHHHHH-HHH-HHHHHHHHHHcChhhhhhccchHHHHHHHHHh-hCCe
Confidence 445666666665554442 222 23333 467889 9999999999999999999 8886
No 297
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=39.45 E-value=84 Score=35.12 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=48.2
Q ss_pred HHhCC-CEEEEeCC-cHHHHHHHHhhhcC----CcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHH---HHHhCCC
Q 010860 117 FDKCE-RKVVVTAN-PTLMVEPFVKDFLG----GDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAV---LKEFGED 187 (499)
Q Consensus 117 ~~~~G-~vvlvSas-~~~~v~~ia~~~lg----~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l---~~~~~~~ 187 (499)
+|..+ ...+++|+ .++.++..-+++.. ...|+|-+ |.-+.|++-. ++.-|.
T Consensus 723 lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CR-------------------ctPtQKA~v~~llq~~t~k- 782 (1051)
T KOG0210|consen 723 LRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCR-------------------CTPTQKAQVVRLLQKKTGK- 782 (1051)
T ss_pred hhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEe-------------------cChhHHHHHHHHHHHhhCc-
Confidence 56666 77788874 55555544433211 22333322 2455666543 333331
Q ss_pred CCeEEEeCCcCcHHHHhccccCeecCCCCC
Q 010860 188 APDLGIGDRQTDHDFMSICKEGYMVLPSKS 217 (499)
Q Consensus 188 ~~~~aygDS~~D~pmL~~a~~~~~Vnp~~~ 217 (499)
...|.||+.||+.|...|+-.+=+-.++.
T Consensus 783 -rvc~IGDGGNDVsMIq~A~~GiGI~gkEG 811 (1051)
T KOG0210|consen 783 -RVCAIGDGGNDVSMIQAADVGIGIVGKEG 811 (1051)
T ss_pred -eEEEEcCCCccchheeecccceeeecccc
Confidence 34589999999999999998887766553
No 298
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=39.32 E-value=18 Score=33.82 Aligned_cols=25 Identities=28% Similarity=0.259 Sum_probs=17.7
Q ss_pred CeEEEEecCCceeecC-CchHHHHHH
Q 010860 20 YGSIAADLDGTLLVSR-SSFPYFMLV 44 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~-s~~~~~~~~ 44 (499)
..++.||+||||+... +..+.+..+
T Consensus 11 ~~l~lfdvdgtLt~~r~~~~~e~~~~ 36 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQKVTPEMLEF 36 (252)
T ss_pred ceEEEEecCCccccccccCCHHHHHH
Confidence 4599999999999864 444444443
No 299
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=38.95 E-value=16 Score=36.89 Aligned_cols=16 Identities=38% Similarity=0.391 Sum_probs=14.1
Q ss_pred CCeEEEEecCCceeec
Q 010860 19 AYGSIAADLDGTLLVS 34 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~ 34 (499)
..|+.++|+|+||+.+
T Consensus 2 ~~k~~v~DlDnTlw~g 17 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGG 17 (320)
T ss_pred CeEEEEEcCCCCCCCC
Confidence 3578999999999997
No 300
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=38.84 E-value=16 Score=41.44 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=20.7
Q ss_pred HHHh-CC-CEEEEeCCcHHHHHHHHhhhcCC
Q 010860 116 VFDK-CE-RKVVVTANPTLMVEPFVKDFLGG 144 (499)
Q Consensus 116 ~~~~-~G-~vvlvSas~~~~v~~ia~~~lg~ 144 (499)
.+.+ .| .|+|+||=....++.+... +++
T Consensus 525 ~L~~d~g~~V~ivSGR~~~~l~~~~~~-~~l 554 (726)
T PRK14501 525 RLAADPNTDVAIISGRDRDTLERWFGD-LPI 554 (726)
T ss_pred HHHcCCCCeEEEEeCCCHHHHHHHhCC-CCe
Confidence 3444 48 9999999988888877666 554
No 301
>COG4996 Predicted phosphatase [General function prediction only]
Probab=38.17 E-value=19 Score=31.44 Aligned_cols=32 Identities=6% Similarity=-0.232 Sum_probs=19.0
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEE
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKV 147 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~v 147 (499)
+|.|..| .+-..|=....-+-...+. |++++.
T Consensus 51 ~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~y 83 (164)
T COG4996 51 KWARNSGYILGLASWNFEDKAIKALRA-LDLLQY 83 (164)
T ss_pred HHHHhCCcEEEEeecCchHHHHHHHHH-hchhhh
Confidence 4677888 4447776655544444455 777643
No 302
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=37.30 E-value=20 Score=35.44 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=40.4
Q ss_pred HHHHH---HHHhCC-CEEEEeCCcHHHHHH---HHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHH
Q 010860 111 KESYE---VFDKCE-RKVVVTANPTLMVEP---FVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKE 183 (499)
Q Consensus 111 ~~~~~---~~~~~G-~vvlvSas~~~~v~~---ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~ 183 (499)
|++++ .+++.| +|++||+=.+..-+. ..+. .|+... .+|..++ .+-.. +.. .-+-|..+-++.
T Consensus 148 p~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~--~~LiLR~-~~D~~----~~~--av~yKs~~R~~l 217 (275)
T TIGR01680 148 PETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW--EKLILKD-PQDNS----AEN--AVEYKTAARAKL 217 (275)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc--ceeeecC-CCCCc----cch--hHHHHHHHHHHH
Confidence 45555 578899 999999987654333 3334 576421 2343331 11000 000 112343333333
Q ss_pred hCCCCCeE-EEeCCcCcH
Q 010860 184 FGEDAPDL-GIGDRQTDH 200 (499)
Q Consensus 184 ~~~~~~~~-aygDS~~D~ 200 (499)
..+.+..+ ..||..+|+
T Consensus 218 i~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 218 IQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred HHcCceEEEEECCCHHhc
Confidence 33333333 579999998
No 303
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=37.25 E-value=15 Score=33.36 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=15.6
Q ss_pred CCCeEEEEecCCceeecCC
Q 010860 18 SAYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 18 ~~~~~avFD~DgTL~~~~s 36 (499)
.--+..++|+|.||+..|.
T Consensus 26 ~Gikgvi~DlDNTLv~wd~ 44 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN 44 (175)
T ss_pred cCCcEEEEeccCceecccC
Confidence 3456899999999999775
No 304
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=37.24 E-value=19 Score=34.60 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=39.2
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHH---HHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCCCCC
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEP---FVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGEDAP 189 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~---ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~~~~ 189 (499)
++.++++| .|++||+=++..-+. -.+. .|+... ..+.... ++...+.-. .. +.+++...|.+. | +.
T Consensus 124 ~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~--~~l~lr~-~~~~~~~~~--~~-yK~~~r~~i~~~-G--y~ 193 (229)
T PF03767_consen 124 YNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGW--DHLILRP-DKDPSKKSA--VE-YKSERRKEIEKK-G--YR 193 (229)
T ss_dssp HHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTB--SCGEEEE-ESSTSS---------SHHHHHHHHHT-T--EE
T ss_pred HHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCcc--chhcccc-ccccccccc--cc-cchHHHHHHHHc-C--Cc
Confidence 34789999 999999866553333 3345 676421 2222210 010001000 11 344444445442 2 22
Q ss_pred -eEEEeCCcCcHHH
Q 010860 190 -DLGIGDRQTDHDF 202 (499)
Q Consensus 190 -~~aygDS~~D~pm 202 (499)
...+||+.+|+.=
T Consensus 194 Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 194 IIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEESSGGGCHC
T ss_pred EEEEeCCCHHHhhc
Confidence 3468999999876
No 305
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=37.24 E-value=1.2e+02 Score=27.37 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=14.0
Q ss_pred HHHhCC-CEEEEeCCcHHHHH
Q 010860 116 VFDKCE-RKVVVTANPTLMVE 135 (499)
Q Consensus 116 ~~~~~G-~vvlvSas~~~~v~ 135 (499)
..+++| +++-+||=+..+..
T Consensus 38 ~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 38 KIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred HHHHCCeEEEEECcCcHHHHH
Confidence 467788 88888887755443
No 306
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=36.12 E-value=85 Score=28.31 Aligned_cols=48 Identities=15% Similarity=0.308 Sum_probs=34.3
Q ss_pred HHHHhCC--CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEe
Q 010860 115 EVFDKCE--RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVK 166 (499)
Q Consensus 115 ~~~~~~G--~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~ 166 (499)
++++++| .|+.||-...+.++.|++. +|...-+ ++..+. +|.||..+.
T Consensus 72 ~elksKGVd~iicvSVnDpFv~~aW~k~-~g~~~~V--~f~aD~-~g~ftk~lg 121 (171)
T KOG0541|consen 72 DELKSKGVDEIICVSVNDPFVMKAWAKS-LGANDHV--KFVADP-AGEFTKSLG 121 (171)
T ss_pred HHHHhcCCcEEEEEecCcHHHHHHHHhh-cCccceE--EEEecC-CCceeeecc
Confidence 4688899 6778899999999999999 8874311 232232 677776553
No 307
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=35.86 E-value=56 Score=30.14 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=26.6
Q ss_pred HHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEe
Q 010860 114 YEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLG 149 (499)
Q Consensus 114 ~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vig 149 (499)
++.++++| .++++||.....++.+++. ++ +.++|
T Consensus 26 l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~-~~~i~ 60 (204)
T TIGR01484 26 LERLREAGVKVVLVTGRSLAEIKELLKQ-LP-LPLIA 60 (204)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHh-CC-CCEEE
Confidence 44567789 9999999999999999887 65 33444
No 308
>KOG3954 consensus Electron transfer flavoprotein, alpha subunit [Energy production and conversion]
Probab=35.22 E-value=37 Score=33.17 Aligned_cols=83 Identities=20% Similarity=0.201 Sum_probs=47.5
Q ss_pred CEEEEeCC-------cHHHHHHHHhhhcCCcEEEeCeEEEecCCCce--------eeeEecCCccc-chhHHHHHHHHhC
Q 010860 122 RKVVVTAN-------PTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRA--------TGFVKRPGVLV-GKWKKLAVLKEFG 185 (499)
Q Consensus 122 ~vvlvSas-------~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~--------tG~~~~~~~~~-g~~K~~~l~~~~~ 185 (499)
--++|||+ .-.++.++|+. ||.- |=+|+..++ +|.. ||++..|. +| .-+=--+|+.+.|
T Consensus 218 AkvVVsGGR~LKs~enFkll~~LAdk-lgaa-vGAtRaaVD--aGyvpNdlQiGQTGKIVAPe-LYiAvGisGAIQHLAG 292 (336)
T KOG3954|consen 218 AKVVVSGGRGLKSGENFKLLYDLADK-LGAA-VGATRAAVD--AGYVPNDLQIGQTGKIVAPE-LYIAVGISGAIQHLAG 292 (336)
T ss_pred ceEEEECCcccCCcccceehHHHHHH-hchh-hchhhhhhc--cCcCCCccccccccceeccc-eEEEEeccHHHHHhhc
Confidence 55677775 22389999999 8863 456777776 5654 77777643 33 2222235666666
Q ss_pred CCC-CeEEEeCCcCcHHHHhccccC
Q 010860 186 EDA-PDLGIGDRQTDHDFMSICKEG 209 (499)
Q Consensus 186 ~~~-~~~aygDS~~D~pmL~~a~~~ 209 (499)
... ..+.-=|-.-|.|++..++..
T Consensus 293 mKDSKvIvAINkDpdAPIFqvAD~G 317 (336)
T KOG3954|consen 293 MKDSKVIVAINKDPDAPIFQVADYG 317 (336)
T ss_pred CccceEEEEecCCCCCCceeeeccc
Confidence 321 233333445566666655543
No 309
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=34.84 E-value=46 Score=31.98 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=43.6
Q ss_pred HHHHHHhCC-CEEEEeCCcHHHHH--HHHhhhcCCcE-EEeCeEEEecCCCceeeeEecCCcccchhHHHHHHH---HhC
Q 010860 113 SYEVFDKCE-RKVVVTANPTLMVE--PFVKDFLGGDK-VLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLK---EFG 185 (499)
Q Consensus 113 ~~~~~~~~G-~vvlvSas~~~~v~--~ia~~~lg~d~-vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~---~~~ 185 (499)
++++++++| +++++|.+++...+ ...+. +|++. .. +..+| .++.-...+.+ ..+
T Consensus 32 ~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~---------~~Ii~---------s~~~~~~~l~~~~~~~~ 92 (242)
T TIGR01459 32 NLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLP---------EMIIS---------SGEIAVQMILESKKRFD 92 (242)
T ss_pred HHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCcccc---------ceEEc---------cHHHHHHHHHhhhhhcc
Confidence 445678889 99999998876655 56677 78752 11 11111 11111122322 223
Q ss_pred C-CCCeEEEeCCcCcHHHHhccc
Q 010860 186 E-DAPDLGIGDRQTDHDFMSICK 207 (499)
Q Consensus 186 ~-~~~~~aygDS~~D~pmL~~a~ 207 (499)
. ...++..||+..|+..++-++
T Consensus 93 ~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 93 IRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred CCCceEEEeCCcccchhhhcCCC
Confidence 2 224678899999998886544
No 310
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=34.78 E-value=18 Score=34.74 Aligned_cols=10 Identities=50% Similarity=0.534 Sum_probs=0.0
Q ss_pred EEecCCceee
Q 010860 24 AADLDGTLLV 33 (499)
Q Consensus 24 vFD~DgTL~~ 33 (499)
++|+||||.+
T Consensus 1 ~lDyDGTL~p 10 (235)
T PF02358_consen 1 FLDYDGTLAP 10 (235)
T ss_dssp EEE-TTTSS-
T ss_pred CcccCCccCC
No 311
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=34.24 E-value=74 Score=36.36 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=58.1
Q ss_pred HhhccH---HHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCeEEEecCCCc-e-----------eeeEe--c
Q 010860 106 AADVRK---ESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTEIEVNPRTKR-A-----------TGFVK--R 167 (499)
Q Consensus 106 ~~~i~~---~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~-~-----------tG~~~--~ 167 (499)
.+-+|| ++++..|.+| .|=+|||-.-.-++.||.+ -||=.==+..+.. +|+ | -+++. .
T Consensus 645 kDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~l---EG~eFr~~s~ee~~~i~pkl~VlA 720 (1034)
T KOG0204|consen 645 KDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLAL---EGKEFRELSQEERDKIWPKLRVLA 720 (1034)
T ss_pred cCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCcccee---cchhhhhcCHHHHHhhhhhheeee
Confidence 334565 4555788999 8889999999999999999 8871000001111 111 0 01000 0
Q ss_pred CCcccchhHHHHHHHHhCCCCCeEEE-eCCcCcHHHHhccccCeecC
Q 010860 168 PGVLVGKWKKLAVLKEFGEDAPDLGI-GDRQTDHDFMSICKEGYMVL 213 (499)
Q Consensus 168 ~~~~~g~~K~~~l~~~~~~~~~~~ay-gDS~~D~pmL~~a~~~~~Vn 213 (499)
.. .-..|..-++.... +.+.+|. ||+.||.|-|+.|+-.++-.
T Consensus 721 RS--SP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMG 764 (1034)
T KOG0204|consen 721 RS--SPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMG 764 (1034)
T ss_pred cC--CCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhcc
Confidence 00 11123333332221 2356665 99999999999999877654
No 312
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=34.15 E-value=72 Score=26.24 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=23.8
Q ss_pred HHHHHHHHhCC-CEEEEeCCc----HHHHHHHHhhhcCCc
Q 010860 111 KESYEVFDKCE-RKVVVTANP----TLMVEPFVKDFLGGD 145 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~----~~~v~~ia~~~lg~d 145 (499)
.++++.++++| +++++|-++ +.+++.+ +. +|++
T Consensus 20 ~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~-~Gi~ 57 (101)
T PF13344_consen 20 VEALDALRERGKPVVFLTNNSSRSREEYAKKL-KK-LGIP 57 (101)
T ss_dssp HHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HH-TTTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-Hh-cCcC
Confidence 34556889999 999999664 5666666 55 8886
No 313
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=33.58 E-value=27 Score=36.02 Aligned_cols=18 Identities=28% Similarity=0.285 Sum_probs=15.1
Q ss_pred CCeEEEEecCCceeecCC
Q 010860 19 AYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s 36 (499)
++++++||.||||+...+
T Consensus 1 ~~k~l~lDrDgtl~~~~~ 18 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPP 18 (354)
T ss_pred CCcEEEEeCCCCccCCCC
Confidence 368999999999999643
No 314
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=33.16 E-value=25 Score=34.16 Aligned_cols=14 Identities=50% Similarity=0.707 Sum_probs=12.0
Q ss_pred CCeEEEEecCCcee
Q 010860 19 AYGSIAADLDGTLL 32 (499)
Q Consensus 19 ~~~~avFD~DgTL~ 32 (499)
+..+.+.||||||+
T Consensus 1 ~~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 1 PPRLLASDLDGTLI 14 (247)
T ss_dssp -SEEEEEETBTTTB
T ss_pred CCEEEEEECCCCCc
Confidence 35789999999999
No 315
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=32.51 E-value=1e+02 Score=28.24 Aligned_cols=27 Identities=22% Similarity=0.145 Sum_probs=18.0
Q ss_pred hhHHHHHHHHhCCCCCeEEEeCCcCcHHHHh
Q 010860 174 KWKKLAVLKEFGEDAPDLGIGDRQTDHDFMS 204 (499)
Q Consensus 174 ~~K~~~l~~~~~~~~~~~aygDS~~D~pmL~ 204 (499)
.+||..++.. ..++++-||..-.-+++
T Consensus 124 h~KV~~vrth----~idlf~ed~~~na~~iA 150 (194)
T COG5663 124 HHKVEAVRTH----NIDLFFEDSHDNAGQIA 150 (194)
T ss_pred cccchhhHhh----ccCccccccCchHHHHH
Confidence 4688888764 24678888886555544
No 316
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=32.47 E-value=69 Score=28.68 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=30.2
Q ss_pred HHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEEEeCe
Q 010860 115 EVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKVLGTE 151 (499)
Q Consensus 115 ~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~vigt~ 151 (499)
+.+++.| ..++..|.+...+..++++ +|++.|.+++
T Consensus 60 ~~L~~~g~~L~v~~g~~~~~l~~l~~~-~~~~~V~~~~ 96 (165)
T PF00875_consen 60 ESLRKLGIPLLVLRGDPEEVLPELAKE-YGATAVYFNE 96 (165)
T ss_dssp HHHHHTTS-EEEEESSHHHHHHHHHHH-HTESEEEEE-
T ss_pred HHHHhcCcceEEEecchHHHHHHHHHh-cCcCeeEecc
Confidence 3578889 9999999999999999999 9999888765
No 317
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=32.02 E-value=1.3e+02 Score=27.77 Aligned_cols=33 Identities=24% Similarity=0.165 Sum_probs=22.9
Q ss_pred HHHHHHHHhCC----CCCeEEEeCCcCcHHHHhcccc
Q 010860 176 KKLAVLKEFGE----DAPDLGIGDRQTDHDFMSICKE 208 (499)
Q Consensus 176 K~~~l~~~~~~----~~~~~aygDS~~D~pmL~~a~~ 208 (499)
|.-.+.+++.+ ...++..||+.+|+..-+.++-
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi 143 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGI 143 (181)
T ss_pred ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCC
Confidence 55556555532 2357889999999998887664
No 318
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=31.73 E-value=29 Score=31.48 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=21.6
Q ss_pred CCCCCCCCccccCC-----CCCeEEEEecCCceeecCC
Q 010860 4 KPGRKFPPITECNG-----SAYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 4 ~~~~~~~~~~~~~~-----~~~~~avFD~DgTL~~~~s 36 (499)
+|---|++++..+- ..-+++++|+||||+..++
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~v~~vv~D~Dgtl~~~~~ 41 (170)
T TIGR01668 4 LPHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDH 41 (170)
T ss_pred CcccccCchhhCCHHHHHHCCCCEEEEecCCccccCCC
Confidence 34445555544332 2457899999999998654
No 319
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=29.72 E-value=29 Score=33.35 Aligned_cols=20 Identities=25% Similarity=0.551 Sum_probs=15.9
Q ss_pred CeEEEEecCCceeecCCchH
Q 010860 20 YGSIAADLDGTLLVSRSSFP 39 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s~~~ 39 (499)
.+..+||+||||+.+...++
T Consensus 8 ~~~~~~D~dG~l~~~~~~~p 27 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGNHTYP 27 (242)
T ss_pred CCEEEEecccccccCCccCc
Confidence 45899999999999765443
No 320
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=29.53 E-value=2.4e+02 Score=32.53 Aligned_cols=23 Identities=17% Similarity=0.093 Sum_probs=21.3
Q ss_pred CCCeEEEecCCCCChHHHHHHHh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIAL 322 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~ 322 (499)
++|.++|--+.|..|.+++-..+
T Consensus 38 ~~pi~yvl~~~s~~d~l~l~~~~ 60 (818)
T PRK04974 38 SRPIVYVLPYNSLSDLLTLRKQC 60 (818)
T ss_pred CCCEEEEeCCCchhhHHHHHHHH
Confidence 58999999999999999998875
No 321
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=28.81 E-value=1.2e+02 Score=24.95 Aligned_cols=45 Identities=13% Similarity=-0.080 Sum_probs=33.7
Q ss_pred cHHHHHHHHhhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhC
Q 010860 130 PTLMVEPFVKDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFG 185 (499)
Q Consensus 130 ~~~~v~~ia~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~ 185 (499)
++-....-|+. ||+..++.+. . +|.+.|.+.||+ .|+..+++|+-
T Consensus 23 fr~~t~~~a~~-lGlrGWv~Nt---~--~GtvkG~leGp~-----~~vd~mk~wl~ 67 (98)
T KOG3360|consen 23 FRKHTLDEAKK-LGLRGWVMNT---S--EGTVKGQLEGPP-----EKVDEMKEWLL 67 (98)
T ss_pred hhHHHHHHHHh-hcceEEEEec---C--CceEEEEEeCCH-----HHHHHHHHHHH
Confidence 34455666788 9987766543 3 899999999953 59999999984
No 322
>COG3411 Ferredoxin [Energy production and conversion]
Probab=28.14 E-value=45 Score=25.19 Aligned_cols=19 Identities=42% Similarity=0.518 Sum_probs=15.0
Q ss_pred HHHHhhCCC-EEEecCCeec
Q 010860 359 ISELLQKGD-LVVCPEGTTC 377 (499)
Q Consensus 359 ~~~~l~~G~-l~IFPEGTrt 377 (499)
+-.+++.|+ ++++|||+--
T Consensus 10 Cl~~C~~gPvl~vYpegvWY 29 (64)
T COG3411 10 CLGVCQDGPVLVVYPEGVWY 29 (64)
T ss_pred hhhhhccCCEEEEecCCeeE
Confidence 456778898 9999999643
No 323
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=27.02 E-value=1.9e+02 Score=29.33 Aligned_cols=61 Identities=10% Similarity=0.194 Sum_probs=40.6
Q ss_pred hcCCCHHH-----HHHHHHHHhhhHHHhhccHHHHHHHHhCC-CEEEEeCCcHHHHHHHHhhhcCCcEE
Q 010860 85 FSGLKIRD-----IELASRAVLPRFYAADVRKESYEVFDKCE-RKVVVTANPTLMVEPFVKDFLGGDKV 147 (499)
Q Consensus 85 l~G~~~~~-----l~~~~~~~~~~~~~~~i~~~~~~~~~~~G-~vvlvSas~~~~v~~ia~~~lg~d~v 147 (499)
.-|++.+| ++++|+.+++.. ...+.....+...++| ..++..|.-.+++..+|++ ||+..+
T Consensus 237 ~lg~d~~e~~~~~~~~~A~~i~~~~-~~~m~~ai~~v~~~~G~Dpv~~gGaG~~~a~~lA~~-lg~~~v 303 (318)
T TIGR03123 237 MVCADLEELGEEDVRNLAKYYYEAQ-LEQLTEAIEEVLERYGLKTVVAAGAGEFLAKEAAAR-LGRECI 303 (318)
T ss_pred HhCCChhHhcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCCeEEecchHHHHHHHHHH-cCCCee
Confidence 33777665 777777776543 2223222222334688 6677888889999999999 998754
No 324
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=25.90 E-value=46 Score=32.62 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=21.2
Q ss_pred HHHhhCCC-EEEecCCeecCC-----CcccccchhhhhcCCcEE
Q 010860 360 SELLQKGD-LVVCPEGTTCRE-----NFLLRFSALFAEMSDRIV 397 (499)
Q Consensus 360 ~~~l~~G~-l~IFPEGTrt~~-----~~l~~Fk~~~~~~~~pVv 397 (499)
+++.++|. ++||||+..+.- ..+..+..++.+.++.|+
T Consensus 33 ~~a~~~ga~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii 76 (270)
T cd07571 33 RELADEKPDLVVWPETALPFDLQRDPDALARLARAARAVGAPLL 76 (270)
T ss_pred hhcccCCCCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEE
Confidence 34445574 999999987631 123333344444555554
No 325
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=25.21 E-value=1.6e+02 Score=26.43 Aligned_cols=18 Identities=28% Similarity=0.292 Sum_probs=14.5
Q ss_pred CCeEEEEecCCceeecCC
Q 010860 19 AYGSIAADLDGTLLVSRS 36 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~~s 36 (499)
.....|+|+|+||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 345789999999999743
No 326
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=24.87 E-value=1e+02 Score=35.77 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=27.6
Q ss_pred cchhHHHHHHHHh------CCC-CCeEEEeCCcCcHHHHhcccc
Q 010860 172 VGKWKKLAVLKEF------GED-APDLGIGDRQTDHDFMSICKE 208 (499)
Q Consensus 172 ~g~~K~~~l~~~~------~~~-~~~~aygDS~~D~pmL~~a~~ 208 (499)
.|-.|...++..+ |.. ...+++||+.||.+||+.++.
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~ 802 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITS 802 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhh
Confidence 4667888777664 321 246799999999999999873
No 327
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=24.33 E-value=45 Score=38.66 Aligned_cols=23 Identities=9% Similarity=0.109 Sum_probs=16.6
Q ss_pred HhCC-CEEEEeCCcHHHHHHHHhh
Q 010860 118 DKCE-RKVVVTANPTLMVEPFVKD 140 (499)
Q Consensus 118 ~~~G-~vvlvSas~~~~v~~ia~~ 140 (499)
++.| .++||||=...-++.+...
T Consensus 630 ~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 630 RDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCCCEEEEEeCCCHHHHHHHhCC
Confidence 4456 8899999887777766543
No 328
>PLN02645 phosphoglycolate phosphatase
Probab=23.21 E-value=94 Score=31.22 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=46.0
Q ss_pred HHHHHHHHhCC-CEEEEeCCcHHHHHHHH---hhhcCCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC
Q 010860 111 KESYEVFDKCE-RKVVVTANPTLMVEPFV---KDFLGGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE 186 (499)
Q Consensus 111 ~~~~~~~~~~G-~vvlvSas~~~~v~~ia---~~~lg~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~ 186 (499)
.++++.++++| +++++|..+..-.+.++ +. +|++ ... +..+|. +......+++ .+.
T Consensus 50 ~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~------~~~---~~I~ts---------~~~~~~~l~~-~~~ 109 (311)
T PLN02645 50 PETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLN------VTE---EEIFSS---------SFAAAAYLKS-INF 109 (311)
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCC------CCh---hhEeeh---------HHHHHHHHHh-hcc
Confidence 35556789999 99999987644333333 44 7774 111 122221 1112222332 111
Q ss_pred -CCCeEEEeCCcCcHHHHhccccCeecCC
Q 010860 187 -DAPDLGIGDRQTDHDFMSICKEGYMVLP 214 (499)
Q Consensus 187 -~~~~~aygDS~~D~pmL~~a~~~~~Vnp 214 (499)
....+.++++.+|...++.++-..+..+
T Consensus 110 ~~~~~V~viG~~~~~~~l~~~Gi~~~~g~ 138 (311)
T PLN02645 110 PKDKKVYVIGEEGILEELELAGFQYLGGP 138 (311)
T ss_pred CCCCEEEEEcCHHHHHHHHHCCCEEecCc
Confidence 1134667888888888888776655433
No 329
>PRK14556 pyrH uridylate kinase; Provisional
Probab=21.28 E-value=1.9e+02 Score=28.28 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=31.2
Q ss_pred HHHhCCCEEEEeCC-------cHHHHHHHHhhhcCCcEEE-eCeEEEecCCCceee
Q 010860 116 VFDKCERKVVVTAN-------PTLMVEPFVKDFLGGDKVL-GTEIEVNPRTKRATG 163 (499)
Q Consensus 116 ~~~~~G~vvlvSas-------~~~~v~~ia~~~lg~d~vi-gt~l~~~~~~g~~tG 163 (499)
.|.++|+|+|.+|. .|.++.-+|.. ++.|.++ +|.+ ||.||.
T Consensus 131 ~~l~~g~vvi~~gg~G~p~~StD~lAallA~~-l~Ad~Lii~TdV-----DGVYd~ 180 (249)
T PRK14556 131 QELAKGRVLIFAGGTGNPFVTTDTTASLRAVE-IGADALLKATTV-----NGVYDK 180 (249)
T ss_pred HHHhCCCEEEEECCCCCCcCCcHHHHHHHHHH-cCCCEEEEEeCC-----CccCCC
Confidence 46678877775554 48888888888 9998665 6654 788875
No 330
>PTZ00445 p36-lilke protein; Provisional
Probab=21.10 E-value=38 Score=32.16 Aligned_cols=17 Identities=35% Similarity=0.446 Sum_probs=13.9
Q ss_pred CeEEEEecCCceeecCC
Q 010860 20 YGSIAADLDGTLLVSRS 36 (499)
Q Consensus 20 ~~~avFD~DgTL~~~~s 36 (499)
=+++++|||.||+.--|
T Consensus 43 Ik~Va~D~DnTlI~~Hs 59 (219)
T PTZ00445 43 IKVIASDFDLTMITKHS 59 (219)
T ss_pred CeEEEecchhhhhhhhc
Confidence 36899999999999433
No 331
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=20.97 E-value=41 Score=39.25 Aligned_cols=16 Identities=13% Similarity=0.096 Sum_probs=13.7
Q ss_pred CCeEEEEecCCceeec
Q 010860 19 AYGSIAADLDGTLLVS 34 (499)
Q Consensus 19 ~~~~avFD~DgTL~~~ 34 (499)
..++.+||+||||++-
T Consensus 590 ~~RLlfLDyDGTLap~ 605 (934)
T PLN03064 590 NNRLLILGFNATLTEP 605 (934)
T ss_pred cceEEEEecCceeccC
Confidence 4678999999999984
No 332
>PRK04220 2-phosphoglycerate kinase; Provisional
Probab=20.94 E-value=3.1e+02 Score=27.61 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHhhhHHHhhccHH--HHHHHHh-CC-CEEEEeCCc----HHHHHHHHhhhcCCcEEEeCeE
Q 010860 88 LKIRDIELASRAVLPRFYAADVRKE--SYEVFDK-CE-RKVVVTANP----TLMVEPFVKDFLGGDKVLGTEI 152 (499)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~i~~~--~~~~~~~-~G-~vvlvSas~----~~~v~~ia~~~lg~d~vigt~l 152 (499)
.+.+++++.+.+.+.+...+.+.+. .++..++ +- -+++++|.+ +.++..+|++ ||.+.|++|+.
T Consensus 55 i~~~el~~~V~~~L~~~~~~~~~~~y~~~~~i~~~~~p~iIlI~G~sgsGKStlA~~La~~-l~~~~vi~~D~ 126 (301)
T PRK04220 55 ITKEELRRRVYYKLIEKDYEEVAEKYLLWRRIRKSKEPIIILIGGASGVGTSTIAFELASR-LGIRSVIGTDS 126 (301)
T ss_pred eeHHHHHHHHHHHHHHhCcHhHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHH-hCCCEEEechH
Confidence 5678888777776665533333222 1223344 33 566776543 5688899988 89887777663
No 333
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=20.93 E-value=5.4e+02 Score=29.74 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=21.3
Q ss_pred CCCeEEEecCCCCChHHHHHHHh
Q 010860 300 SPGNLYVCNHRTPLDPIVIAIAL 322 (499)
Q Consensus 300 ~~p~iiVaNH~S~lD~~~l~~~~ 322 (499)
++|.++|--+.|..|.+++-..+
T Consensus 28 ~~p~~yvl~~~s~~d~~~l~~~~ 50 (799)
T TIGR03703 28 ERPIVYVLPTRSLSDLLALQKAC 50 (799)
T ss_pred CCCEEEEeCCCchhhHHHHHHHH
Confidence 68999999999999999998875
No 334
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.49 E-value=3.3e+02 Score=22.54 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=42.7
Q ss_pred EEEEeCCcHHHHHHHHhhhc---CCcEEEeCeEEEecCCCceeeeEecCCcccchhHHHHHHHHhCC--CCCeEEEeCCc
Q 010860 123 KVVVTANPTLMVEPFVKDFL---GGDKVLGTEIEVNPRTKRATGFVKRPGVLVGKWKKLAVLKEFGE--DAPDLGIGDRQ 197 (499)
Q Consensus 123 vvlvSas~~~~v~~ia~~~l---g~d~vigt~l~~~~~~g~~tG~~~~~~~~~g~~K~~~l~~~~~~--~~~~~aygDS~ 197 (499)
+.-||+||--+-..+.+- + |+. -|+ +..++-.+.+++.+... .++.|...|++.+.. +...+-.|||.
T Consensus 2 f~YvS~SPwnly~~l~~F-l~~~~~P--~G~-~~Lr~~~~~~~~~~~~~---~~~~K~~~i~~i~~~fP~~kfiLIGDsg 74 (100)
T PF09949_consen 2 FFYVSNSPWNLYPFLRDF-LRRNGFP--AGP-LLLRDYGPSLSGLFKSG---AEEHKRDNIERILRDFPERKFILIGDSG 74 (100)
T ss_pred EEEEcCCHHHHHHHHHHH-HHhcCCC--CCc-eEcccCCccccccccCC---chhHHHHHHHHHHHHCCCCcEEEEeeCC
Confidence 456899997766666543 4 332 122 22221023344444431 235898888887652 22456789976
Q ss_pred -CcHHHHhc
Q 010860 198 -TDHDFMSI 205 (499)
Q Consensus 198 -~D~pmL~~ 205 (499)
.|...-..
T Consensus 75 q~DpeiY~~ 83 (100)
T PF09949_consen 75 QHDPEIYAE 83 (100)
T ss_pred CcCHHHHHH
Confidence 78666543
No 335
>PF07788 DUF1626: Protein of unknown function (DUF1626); InterPro: IPR012431 This is a family consisting of sequences from hypothetical proteins of unknown function expressed by certain species of archaea. One member (Q9YCN7 from SWISSPROT) is thought to be similar to tropomyosin [].
Probab=20.41 E-value=2.8e+02 Score=21.45 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=20.0
Q ss_pred CEEEEeCCcHHHHHHHHhhhcCCc
Q 010860 122 RKVVVTANPTLMVEPFVKDFLGGD 145 (499)
Q Consensus 122 ~vvlvSas~~~~v~~ia~~~lg~d 145 (499)
++++||.--+.=+...|++ ||++
T Consensus 48 r~ivVtp~id~~a~~~A~~-LGIe 70 (70)
T PF07788_consen 48 RLIVVTPYIDDRAKEMAEE-LGIE 70 (70)
T ss_pred eEEEEEeecCHHHHHHHHH-hCCC
Confidence 7889998877779999999 9985
Done!