BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010864
(498 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CGY8|OGT1_MOUSE UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2
Length = 1046
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A VLQ+ L+EA Y EA R+
Sbjct: 346 AVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRIS 391
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N + + ++G A + Y +A+Q+N A +N ++
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQG-----------ALQCYTRAIQINPAFADAHSNLA-SIH 439
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305
+ S +P AI+ +R A++L+ DF A NL L
Sbjct: 440 KDSGNIP---------EAIASYRTALKLKPDFPDAYCNLAHCL 473
>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1
Length = 1036
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A VLQ+ L+EA Y EA R+
Sbjct: 336 AVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRIS 381
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N + + ++G A + Y +A+Q+N A +N ++
Sbjct: 382 PTFADAYSNMGNTLKEMQDVQG-----------ALQCYTRAIQINPAFADAHSNLA-SIH 429
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305
+ S +P AI+ +R A++L+ DF A NL L
Sbjct: 430 KDSGNIP---------EAIASYRTALKLKPDFPDAYCNLAHCL 463
>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3
Length = 1046
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A VLQ+ L+EA Y EA R+
Sbjct: 346 AVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRIS 391
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N + + ++G A + Y +A+Q+N A +N ++
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQG-----------ALQCYTRAIQINPAFADAHSNLA-SIH 439
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305
+ S +P AI+ +R A++L+ DF A NL L
Sbjct: 440 KDSGNIP---------EAIASYRTALKLKPDFPDAYCNLAHCL 473
>sp|P81436|OGT1_RABIT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1
SV=2
Length = 1046
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A VLQ+ L+EA Y EA R+
Sbjct: 346 AVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRIS 391
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N + + ++G A + Y +A+Q+N A +N ++
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQG-----------ALQCYTRAIQINPAFADAHSNLA-SIH 439
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305
+ S +P AI+ +R A++L+ DF A NL L
Sbjct: 440 KDSGNIP---------EAIASYRTALKLKPDFPDAYCNLAHCL 473
>sp|Q27HV0|OGT1_PIG UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1
Length = 1046
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A VLQ+ L+EA Y EA R+
Sbjct: 346 AVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRIS 391
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N + + ++G A + Y +A+Q+N A +N ++
Sbjct: 392 PTFADAYSNMGNTLKEMQDVQG-----------ALQCYTRAIQINPAFADAHSNLA-SIH 439
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305
+ S +P AI+ +R A++L+ DF A NL L
Sbjct: 440 KDSGNIP---------EAIASYRTALKLKPDFPDAYCNLAHCL 473
>sp|Q5JJI4|TOM20_ORYSJ Probable mitochondrial import receptor subunit TOM20 OS=Oryza
sativa subsp. japonica GN=TOM20 PE=2 SV=1
Length = 202
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 195
R A + E+NP D D L W L E +S P LE+A K
Sbjct: 11 RMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLE----LSQMRNGPESLKCLEDAESKL 66
Query: 196 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL 246
+EA ++ P DA + A + T +A E +++AT+ ++KAV +
Sbjct: 67 EEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDV 117
>sp|A2WYG9|TOM20_ORYSI Probable mitochondrial import receptor subunit TOM20 OS=Oryza
sativa subsp. indica GN=TOM20 PE=2 SV=2
Length = 201
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 195
R A + E+NP D D L W L E +S P LE+A K
Sbjct: 11 RMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLE----LSQMRNGPESLKCLEDAESKL 66
Query: 196 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL 246
+EA ++ P DA + A + T +A E +++AT+ ++KAV +
Sbjct: 67 EEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDV 117
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 35/171 (20%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A Y A++ +P+ AL+N +L+ EEA ++ +
Sbjct: 533 AKMYYQRALQLHPQHNRALFNLGNLLKSQEKK--------------EEAITLLKDSIKYG 578
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
P DA+ + A ++++ R KEAEE+++ KN + L+ NN+G+ L
Sbjct: 579 PEFADAYSSLASLLAEQE----RFKEAEEIYQTGIKNCPDSSDLH-------NNYGVFLV 627
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTL 313
+ +P + A++ ++ AI+L H A+ NLG + L E+++
Sbjct: 628 DTG--LPEK--------AVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSM 668
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 39.7 bits (91), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A Y A++ +P+ AL+N +L+ EEA E+ +
Sbjct: 593 AKMYYQKALQLHPQHNRALFNLGNLLKSQEKT--------------EEAIMLLKESIKYG 638
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
P DA+ + A ++++ R KEAE++++ KN + L+ NN+ + L
Sbjct: 639 PDFADAYSSLASLLAEQE----RFKEAEDIYQAGIKNCPDSSDLH-------NNYAVFL- 686
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 312
+ + P + A++ ++ AIQL H A+ NLG + L E++
Sbjct: 687 -VDSGFPEK--------AVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENS 727
>sp|O20031|YCF3_CHLRE Photosystem I assembly protein ycf3 OS=Chlamydomonas reinhardtii
GN=ycf3 PE=1 SV=1
Length = 172
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 122 LINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181
LI++ G E GR A + Y A+ERNP AL N A++ + + S
Sbjct: 80 LIHTSNG--EHGR--------ALEYYYQALERNPSLSSALNNIAVIYHYRGEQAIENGQS 129
Query: 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGR 225
L E+A + EA RL PT + NW KM GR
Sbjct: 130 EISQILFEKAADYWKEAIRLAPTNYIEALNW-------LKMTGR 166
>sp|Q20144|TMTC1_CAEEL Transmembrane and TPR repeat-containing protein F38B6.6
OS=Caenorhabditis elegans GN=F38B6.6 PE=3 SV=2
Length = 690
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 61/147 (41%), Gaps = 28/147 (19%)
Query: 195 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL 254
Y +CPT YN + D G TK+AE KNY A++L+ + QAL
Sbjct: 421 YSSGLSVCPTNAKIHYNLGKVLGDN----GLTKDAE-------KNYWNAIKLDPSYEQAL 469
Query: 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL-----A 309
NN G L EK +TA S A+ L+ F A NLG L A
Sbjct: 470 NNLGNLL----------EKSGDSKTAESLLARAVTLRPSFAVAWMNLGISQMNLKKYYEA 519
Query: 310 EDTLRTGGTVNPREVSPNELYSQSAIY 336
E +L+ + P S + L++ +Y
Sbjct: 520 EKSLKNSLLIRPN--SAHCLFNLGVLY 544
>sp|Q1KVR8|YCF3_SCEOB Photosystem I assembly protein ycf3 OS=Scenedesmus obliquus GN=ycf3
PE=3 SV=1
Length = 170
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 122 LINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181
LI++ G E GR A + Y A+ERNP AL N A++ + + S
Sbjct: 80 LIHTSNG--EHGR--------ALEYYYQALERNPSLPSALNNIAVIYHYRGEQAIENGQS 129
Query: 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRT 226
L E+A + EA RL PT + NW KM GR
Sbjct: 130 EISQILFEKAADYWKEAIRLAPTNYIEAQNW-------LKMTGRN 167
>sp|B7KKZ8|YCF3_CYAP7 Photosystem I assembly protein ycf3 OS=Cyanothece sp. (strain PCC
7424) GN=ycf3 PE=3 SV=1
Length = 173
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 189 EEACKKYDEATRLCPTLHDAFYNWAIAI---SDRAKMRGRTKEAEELWKQATKNYEKAVQ 245
E A + Y EA L P L A N A+ +RAK GR E+E L+ +A + +++A++
Sbjct: 89 ERALEYYHEAIELNPNLPSALNNIAVIYHYQGERAKEEGREDESEALFDKAAEYWKQAIR 148
Query: 246 LNWNSPQALNNW 257
L N+ NW
Sbjct: 149 LAPNNYIEAQNW 160
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y AIE NP AL N A++ + + +AL ++A + + +A RL
Sbjct: 91 ALEYYHEAIELNPNLPSALNNIAVIYHYQGERAKEEGREDESEALFDKAAEYWKQAIRLA 150
Query: 203 PTLHDAFYNWAIAISDRAKM 222
P + NW + ++ R++M
Sbjct: 151 PNNYIEAQNW-LKVTGRSEM 169
>sp|O82422|SPY_HORVU Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Hordeum
vulgare GN=SPY PE=2 SV=1
Length = 944
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 247
L+ A YD + P A N AIA++D G + E Q Y+KA+ N
Sbjct: 227 LDAAIACYDRCLTISPNFEIAKNNMAIALTDL----GTKVKIEGDINQGVAYYKKALFYN 282
Query: 248 WNSPQALNNWGLALQEL 264
W+ A+ N G+A E+
Sbjct: 283 WHYADAMYNLGVAYGEM 299
>sp|P82872|TO201_ARATH Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis
thaliana GN=TOM20-1 PE=1 SV=1
Length = 188
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 232 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 291
+++ K+ E+ +LN L WG AL ELS + +++ AISK AI +
Sbjct: 6 FFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILID 65
Query: 292 FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 351
H A++ LG A T P + + + ++ A A +P VY
Sbjct: 66 PMKHDAVWCLGNAYTSYARLT--------PDDTQARLNFGLAYLFFGIAVAQQPDNQVYH 117
Query: 352 SALRLVRSMLPLPYLKAGY 370
+L + P L G+
Sbjct: 118 KSLEMADKA---PQLHTGF 133
>sp|Q19V63|YCF3_CHLAT Photosystem I assembly protein ycf3 OS=Chlorokybus atmophyticus
GN=ycf3 PE=3 SV=2
Length = 167
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y AIERNP AL N A++ + + S + + L ++A + +A RL
Sbjct: 91 ALEYYYQAIERNPSLPQALNNIAVIYHYRGEQAIEEGNSEAAEILFDQAASYWKQAIRLA 150
Query: 203 PTLHDAFYNW 212
PT + NW
Sbjct: 151 PTSYIEAQNW 160
>sp|Q6YZI0|SPY_ORYSJ Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa
subsp. japonica GN=SPY PE=3 SV=1
Length = 927
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 84/233 (36%), Gaps = 36/233 (15%)
Query: 56 QTEKQPPSTEQTLNPALRKDEGNRT-FTMRELLTELKSEGEDSVTDASFSQGNT--PHQL 112
Q + P + N A+R D GN T ++ K EG ++ + P
Sbjct: 79 QAQSLPMQAIECFNEAVRIDPGNACALTYCGMI--YKDEGHLVEAAEAYQKARNADPSYK 136
Query: 113 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA 172
A+ L + T + G + + I ++Y A+E + A YN +V E
Sbjct: 137 PAAEFLAIVLTDLGTSLKLAGNTEEGI-----QKYCEALEVDSHYAPAYYNLGVVYSEMM 191
Query: 173 DNVSLDSTSPSKDAL---------------------LEEACKKYDEATRLCPTLHDAFYN 211
L T K AL LE A Y+ + P A N
Sbjct: 192 -QFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTISPNFEIAKNN 250
Query: 212 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQEL 264
AIA++D G + E Q Y+KA+ NW+ A+ N G+A E+
Sbjct: 251 MAIALTDL----GTKVKIEGDINQGVAYYKKALFYNWHYADAMYNLGVAYGEM 299
>sp|P74063|YCF3_SYNY3 Photosystem I assembly protein ycf3 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ycf3 PE=3 SV=1
Length = 173
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 151 IERNPEDYD-ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 209
+E NP D LYN AL+ + D+ E+A Y EA L P + A
Sbjct: 64 LEENPNDRSYILYNMALIHASNGDH--------------EKALGLYQEAIELNPKMPSAL 109
Query: 210 YNWAIAI---SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNW 257
N A+ ++AK G+ +AE L+ +A + +++A++L N+ NW
Sbjct: 110 NNIAVIYHFQGEKAKEAGQEDDAENLFDKAAEYWKQAIRLAPNNYIEAQNW 160
>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Petunia
hybrida GN=SPY PE=2 SV=1
Length = 932
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 247
LE A Y+ + P A N AIA++D G + E Q Y+KA+ N
Sbjct: 241 LESAIACYERCLAVSPNFEIAKNNMAIALTDL----GTKVKLEGDINQGVAYYKKALYYN 296
Query: 248 WNSPQALNNWGLALQEL 264
W+ A+ N G+A E+
Sbjct: 297 WHYADAMYNLGVAYGEM 313
>sp|Q8RVB2|SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Solanum
lycopersicum GN=SPY PE=2 SV=1
Length = 931
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 247
LE A Y+ + P A N AIA++D G + E Q Y+KA+ N
Sbjct: 241 LESAIACYERCLAVSPNFEIAKNNMAIALTDL----GTKVKLEGDINQGVAYYKKALCYN 296
Query: 248 WNSPQALNNWGLALQEL 264
W+ A+ N G+A E+
Sbjct: 297 WHYADAMYNLGVAYGEM 313
>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus
GN=Tmtc4 PE=2 SV=1
Length = 741
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 28/147 (19%)
Query: 195 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL 254
+ A +CP YN ++D+ A K Y +AV+LN A+
Sbjct: 471 FRSALSVCPLNAKVHYNIGKNLADQGNQTA-----------AIKYYREAVRLNPKYVHAM 519
Query: 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL-----A 309
NN G L+E + + A E ++ A+Q+Q DF A NLG V L A
Sbjct: 520 NNLGNILKERNELQEAEELLSL----------AVQIQPDFAAAWMNLGIVQNSLKRFEEA 569
Query: 310 EDTLRTGGTVNPREVSPNELYSQSAIY 336
E + RT + R P+ Y+ +Y
Sbjct: 570 EQSYRT--AIKHRRKYPDCYYNLGRLY 594
>sp|Q96301|SPY_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis
thaliana GN=SPY PE=1 SV=1
Length = 914
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISD---RAKMRGRTKEAEELWKQATKNYEKAV 244
LE A Y+ + P A N AIA++D + K+ G Q Y+KA+
Sbjct: 236 LEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDVT-------QGVAYYKKAL 288
Query: 245 QLNWNSPQALNNWGLALQEL 264
NW+ A+ N G+A E+
Sbjct: 289 YYNWHYADAMYNLGVAYGEM 308
>sp|Q0P3N1|YCF3_OSTTA Photosystem I assembly protein ycf3 OS=Ostreococcus tauri GN=ycf3
PE=3 SV=1
Length = 166
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 141 TFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR 200
T A + Y A++RNP AL N A++ + P + L E+A + + EA R
Sbjct: 89 TKALEYYYQALDRNPSLPQALNNIAVIYHYRGEQALAAGNIPDSETLFEKAAEYWKEAIR 148
Query: 201 LCPTLHDAFYNW 212
L P + NW
Sbjct: 149 LAPLNYSEAQNW 160
>sp|P82874|TO203_ARATH Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis
thaliana GN=TOM20-3 PE=1 SV=1
Length = 202
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 138 RILTFAAKRY--ANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 195
RIL F R N + NP D D L W VL E + S S +K +++EA K+
Sbjct: 9 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELS---QFHSISDAKQ-MIQEAITKF 64
Query: 196 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAV 244
+EA + P +A + A + A + EA+ + AT+ +++AV
Sbjct: 65 EEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAV 113
>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens
GN=TMTC4 PE=2 SV=2
Length = 741
Score = 35.8 bits (81), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 28/147 (19%)
Query: 195 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL 254
+ A +CP YN ++D+ A + Y +AV+LN A+
Sbjct: 471 FRSALSVCPLNAKVHYNIGKNLADKGNQ-----------TAAIRYYREAVRLNPKYVHAM 519
Query: 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL-----A 309
NN G L+E + + A E ++ A+Q+Q DF A NLG V L A
Sbjct: 520 NNLGNILKERNELQEAEELLSL----------AVQIQPDFAAAWMNLGIVQNSLKRFEAA 569
Query: 310 EDTLRTGGTVNPREVSPNELYSQSAIY 336
E + RT + R P+ Y+ +Y
Sbjct: 570 EQSYRT--AIKHRRKYPDCYYNLGRLY 594
>sp|B0JVY3|YCF3_MICAN Photosystem I assembly protein ycf3 OS=Microcystis aeruginosa
(strain NIES-843) GN=ycf3 PE=3 SV=1
Length = 173
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 189 EEACKKYDEATRLCPTLHDAFYNWAIAI---SDRAKMRGRTKEAEELWKQATKNYEKAVQ 245
E+A + Y+EA +L P + A N A+ ++A+ G+ EAE L+ +A + +++A++
Sbjct: 89 EKALEYYEEAIQLNPRMPSALNNIAVIYHFQGEKAREDGQQAEAEALYDKAAEYWKQAIR 148
Query: 246 LNWNSPQALNNW 257
L N+ NW
Sbjct: 149 LAPNNYIEAQNW 160
>sp|B1X0Z5|YCF3_CYAA5 Photosystem I assembly protein ycf3 OS=Cyanothece sp. (strain ATCC
51142) GN=ycf3 PE=3 SV=1
Length = 173
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 162 YNWALVLQESAD-------NVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAI 214
Y AL L+E A+ N+ + S + A +A Y++A L P + A N A+
Sbjct: 58 YYEALKLEEDANDRSYILYNIGIIHASNGEHA---KALDYYEQAVDLNPQMPSALNNIAV 114
Query: 215 AI---SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNW 257
++AK G T EAE L+ +A + +++A++L N+ NW
Sbjct: 115 IYHYQGEKAKSEGNTNEAEALFDKAAEYWKQAIRLAPNNYIEAQNW 160
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 147 YANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH 206
Y A++ NP+ AL N A++ + + + +AL ++A + + +A RL P +
Sbjct: 95 YEQAVDLNPQMPSALNNIAVIYHYQGEKAKSEGNTNEAEALFDKAAEYWKQAIRLAPNNY 154
Query: 207 DAFYNWAIAISDRAKM 222
NW + I+ R++M
Sbjct: 155 IEAQNW-LKITGRSEM 169
>sp|A5GQJ6|YCF3_SYNR3 Photosystem I assembly protein ycf3 OS=Synechococcus sp. (strain
RCC307) GN=ycf3 PE=3 SV=1
Length = 173
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 178 DSTSPSKDALLEEACKKYDEATRLCPTLHD-AF--YNWAIAISDRAKMRGRTKEAEELWK 234
D S D EA + Y EA RL +D AF YN A+ + +
Sbjct: 41 DGMSAQGDGEYAEALENYQEALRLEEDPNDRAFILYNMALVYASNGEH-----------N 89
Query: 235 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREK 273
+A + YE+A+ LN PQ LNN + L +I A+EK
Sbjct: 90 RALEQYEQALALNAKMPQVLNNMAVIHHHLGSI--AQEK 126
>sp|P92792|TOM20_SOLTU Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum
GN=TOM20 PE=1 SV=1
Length = 204
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 254 LNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 302
L WG AL ELS P E + ++ A SK A+ + + H A++ LG
Sbjct: 34 LTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLG 82
>sp|Q3UPH7|ARH40_MOUSE Rho guanine nucleotide exchange factor 40 OS=Mus musculus GN=Arhgef40
PE=2 SV=1
Length = 1517
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 215 AISDRAKMRGRTKEAEELWKQATKNYEKAVQ----LNWNSPQALNNWGLALQELSAIVPA 270
A S K++ + A+ LW+QA N E VQ + + L+ L + LSA++
Sbjct: 1352 ATSPETKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTG 1411
Query: 271 REKQTIVRTAISKFR-----------AAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTV 319
R +T A+S F A L ++L LA +TL + G V
Sbjct: 1412 RAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLASETLDSSGDV 1471
Query: 320 NP 321
+P
Sbjct: 1472 SP 1473
>sp|Q9TL02|YCF3_NEPOL Photosystem I assembly protein ycf3 OS=Nephroselmis olivacea
GN=ycf3 PE=3 SV=1
Length = 171
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+ERNP AL N A++ + S + L ++A + EA RL
Sbjct: 91 ALEYYYQALERNPYLPQALNNIAVIYHYRGEQAIESGNSRISNLLFDKAADYWKEAIRLA 150
Query: 203 PTLHDAFYNWAIAISDR 219
PT + NW + I++R
Sbjct: 151 PTNYIEAQNW-LKITNR 166
>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus
GN=Tmtc3 PE=2 SV=2
Length = 920
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 29/118 (24%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESAD--------------------------NVS 176
A K + A+E NP+ AL+N A+++QES + N+
Sbjct: 621 ALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLG 680
Query: 177 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 234
+ + KD+ E KK A +L P A +N A+ S AK EEL K
Sbjct: 681 MLAMDDKKDSEAESWMKK---AIKLQPDFRSALFNLALLYSQTAKELKALPILEELLK 735
>sp|Q8TER5|ARH40_HUMAN Rho guanine nucleotide exchange factor 40 OS=Homo sapiens GN=ARHGEF40
PE=1 SV=3
Length = 1519
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 215 AISDRAKMRGRTKEAEELWKQATKNYEKAVQ----LNWNSPQALNNWGLALQELSAIVPA 270
A S K++ + A+ LW+QA N E VQ + + L+ L + LSA++
Sbjct: 1354 ATSPEIKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTG 1413
Query: 271 REKQTIVRTAISKFR-----------AAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTV 319
R +T A+S F A L ++L LA +TL + G V
Sbjct: 1414 RAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDV 1473
Query: 320 NP 321
+P
Sbjct: 1474 SP 1475
>sp|P82873|TO202_ARATH Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis
thaliana GN=TOM20-2 PE=1 SV=2
Length = 210
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 232 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 291
+++ A KN E + + + L WG AL ELS P E + ++ AISK A+ +
Sbjct: 13 MFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTIN 72
Query: 292 FDFHRAIYNLGT 303
H+A++ +
Sbjct: 73 PGKHQALWCIAN 84
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 137 QRILTFA-AKRYANAIERN-PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKK 194
+R++ F A++ + A +N P D + L W L E +S P +L +A K
Sbjct: 9 ERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLE----LSQFQPIPEAKLMLNDAISK 64
Query: 195 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 243
+EA + P H A + A A + A +EA+E + +AT+ +++A
Sbjct: 65 LEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRA 113
>sp|P56311|YCF3_CHLVU Photosystem I assembly protein ycf3 OS=Chlorella vulgaris GN=ycf3
PE=3 SV=1
Length = 167
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A Y A+ERNP AL N A++ + S + L ++A + EA RL
Sbjct: 91 ALDYYYQALERNPSLPQALNNIAVIYHYRGEQALESSQTEISKLLFDKAADYWREAIRLA 150
Query: 203 PTLHDAFYNWAIAISDRAKMRGR 225
PT + NW KM GR
Sbjct: 151 PTNYIEAQNW-------LKMTGR 166
>sp|O18158|OGT1_CAEEL UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2
Length = 1151
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 35/160 (21%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+E PE A N A +LQ+ L +A Y EA R+
Sbjct: 450 ATRLYLKALEIYPEFAAAHSNLASILQQQGK--------------LNDAILHYKEAIRIA 495
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262
PT DA+ N G T + A Y +A+Q+N A +N
Sbjct: 496 PTFADAYSNM-----------GNTLKEMGDSSAAIACYNRAIQINPAFADAHSN------ 538
Query: 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 302
L++I + + AI + A++L+ DF A NL
Sbjct: 539 -LASI---HKDAGNMAEAIQSYSTALKLKPDFPDAYCNLA 574
>sp|Q9MUT7|YCF3_MESVI Photosystem I assembly protein ycf3 OS=Mesostigma viride GN=ycf3
PE=3 SV=1
Length = 173
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y AIERNP AL N A++ + + + + L +A + +A RL
Sbjct: 91 ALEYYYQAIERNPSLPQALNNIAVIYHYRGEQAIEEGNIATSEILFNQAASYWKQAIRLA 150
Query: 203 PTLHDAFYNWAIAISDRAKMRGRTKE 228
P + NW K+ GR ++
Sbjct: 151 PNSYIEAQNW-------LKITGRIED 169
>sp|A6YG60|YCF3_LEPTE Photosystem I assembly protein ycf3 OS=Leptosira terrestris GN=ycf3
PE=3 SV=1
Length = 167
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+ERNP AL N A++ + + + L ++A + EA RL
Sbjct: 91 ALEYYYQALERNPSLPQALNNIAVIYHYRGEQAIENGQAEISKMLFDKAADYWKEAIRLA 150
Query: 203 PTLHDAFYNW 212
PT + NW
Sbjct: 151 PTNYIEAQNW 160
>sp|Q06SJ8|YCF3_STIHE Photosystem I assembly protein ycf3 OS=Stigeoclonium helveticum
GN=ycf3 PE=3 SV=1
Length = 167
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+ERNP AL N A++ + + L ++A + EA RL
Sbjct: 91 ALEYYYQALERNPSLPSALNNIAVIYHYRGEQAIEKGQAEISSLLFDKAADYWKEAIRLA 150
Query: 203 PTLHDAFYNWAIAISDRAKMRGR 225
PT + NW KM GR
Sbjct: 151 PTNYIEAQNW-------LKMTGR 166
>sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1
Length = 410
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 11/157 (7%)
Query: 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAIS 217
YD + A +L+ LD+ D + YD +C FY + ++
Sbjct: 82 YDVVLKQAALLKRQLRTPVLDARPQDMDMPRNGLKEAYDRCGEICEEYAKTFYLGTMLMT 141
Query: 218 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 277
+ R R A +W + T N+ +P AL+ W L++L P +
Sbjct: 142 EE---RRRAIWAIYVWCRRTDELVDGPNANYITPTALDRWEKRLEDLFTGRPYDMLDAAL 198
Query: 278 RTAISKFRAAIQ--------LQFDFHRAIYNLGTVLY 306
IS+F IQ ++ D + YN LY
Sbjct: 199 SDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDELY 235
>sp|Q8DIQ6|YCF3_THEEB Photosystem I assembly protein ycf3 OS=Thermosynechococcus
elongatus (strain BP-1) GN=ycf3 PE=3 SV=1
Length = 173
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 189 EEACKKYDEATRLCPTLHDAFYNWAIA---ISDRAKMRGRTKEAEELWKQATKNYEKAVQ 245
E+A + Y +A L P + A N A+ + +A+ + R +EAE+ + +A +++A+Q
Sbjct: 89 EKALEYYHQALELNPRMPQALNNIAVIYHYLGTQAEEQQRLEEAEQFFDRAADYWKRAIQ 148
Query: 246 LNWNSPQALNNW 257
L N+ NW
Sbjct: 149 LAPNNYIEAQNW 160
>sp|Q6YXP2|YCF3_PHYPA Photosystem I assembly protein ycf3 OS=Physcomitrella patens subsp.
patens GN=ycf3 PE=3 SV=1
Length = 168
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A+ERNP A N A++ + S + +A +A + +A L
Sbjct: 91 ALEYYFQALERNPSLPQAFNNMAVICHYRGEQAIQQGDSETSEAWFNQAADYWKQAIALA 150
Query: 203 PTLHDAFYNWAIAISDRAK 221
P+ + NW + I+DR K
Sbjct: 151 PSNYIEAQNW-LKITDRLK 168
>sp|A6MMK8|YCF3_DIOEL Photosystem I assembly protein ycf3 OS=Dioscorea elephantipes
GN=ycf3 PE=3 SV=1
Length = 172
Score = 32.7 bits (73), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 141 TFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR 200
T A + Y AIERNP A N A++ + L S +A ++A + + +A
Sbjct: 91 TKALEYYFQAIERNPFLPQAFNNMAVICHYQGERAILRGDSEIAEAWFDQAAEYWKQAIG 150
Query: 201 LCPTLHDAFYNW 212
L P + +NW
Sbjct: 151 LTPGNYIEAHNW 162
>sp|Q06J27|YCF3_BIGNA Photosystem I assembly protein ycf3 OS=Bigelowiella natans GN=ycf3
PE=3 SV=1
Length = 166
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202
A + Y A++RNP AL N A + + +++ ++A + EA RL
Sbjct: 91 ALEYYYQALDRNPRLSQALNNIATIYHYRGEQALINNQDEISKIFFDKAADYWKEAIRLS 150
Query: 203 PTLHDAFYNW 212
PT + NW
Sbjct: 151 PTSYTKAKNW 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,181,906
Number of Sequences: 539616
Number of extensions: 7816911
Number of successful extensions: 26076
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 24936
Number of HSP's gapped (non-prelim): 1026
length of query: 498
length of database: 191,569,459
effective HSP length: 122
effective length of query: 376
effective length of database: 125,736,307
effective search space: 47276851432
effective search space used: 47276851432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)