Query 010864
Match_columns 498
No_of_seqs 518 out of 3063
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 15:53:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtx_A MAMA; tetratricopeptide 99.9 5.5E-23 1.9E-27 187.0 24.1 172 122-351 7-178 (184)
2 2pl2_A Hypothetical conserved 99.9 5.2E-23 1.8E-27 193.8 22.6 170 134-358 15-195 (217)
3 2h6f_A Protein farnesyltransfe 99.9 6.3E-23 2.1E-27 210.3 21.1 177 134-358 107-284 (382)
4 2h6f_A Protein farnesyltransfe 99.9 2.9E-22 9.9E-27 205.3 23.2 195 113-355 110-316 (382)
5 4gyw_A UDP-N-acetylglucosamine 99.9 1.7E-22 5.8E-27 222.8 20.8 159 134-346 19-177 (723)
6 2pl2_A Hypothetical conserved 99.9 6.4E-22 2.2E-26 186.3 21.8 176 112-342 17-213 (217)
7 4i17_A Hypothetical protein; T 99.9 1.8E-21 6.2E-26 183.4 22.1 191 134-359 17-225 (228)
8 1w3b_A UDP-N-acetylglucosamine 99.9 3.6E-20 1.2E-24 188.3 24.5 162 114-310 149-320 (388)
9 3hym_B Cell division cycle pro 99.9 1.2E-19 3.9E-24 178.7 25.0 201 112-356 68-312 (330)
10 4abn_A Tetratricopeptide repea 99.8 6.5E-20 2.2E-24 193.3 24.1 195 114-356 82-300 (474)
11 4eqf_A PEX5-related protein; a 99.8 1.8E-19 6.3E-24 181.4 26.4 176 134-356 75-289 (365)
12 2q7f_A YRRB protein; TPR, prot 99.8 8.8E-20 3E-24 171.9 21.8 172 133-358 66-237 (243)
13 4gyw_A UDP-N-acetylglucosamine 99.8 2.5E-20 8.6E-25 205.5 20.7 151 153-357 4-154 (723)
14 4ga2_A E3 SUMO-protein ligase 99.8 5.8E-21 2E-25 169.2 12.6 142 134-310 7-149 (150)
15 3urz_A Uncharacterized protein 99.8 4.8E-20 1.6E-24 172.2 18.8 163 134-349 14-192 (208)
16 1w3b_A UDP-N-acetylglucosamine 99.8 2.1E-19 7.2E-24 182.7 24.6 176 135-357 44-246 (388)
17 4eqf_A PEX5-related protein; a 99.8 1.8E-19 6.1E-24 181.4 22.9 196 112-347 77-314 (365)
18 1fch_A Peroxisomal targeting s 99.8 4.6E-19 1.6E-23 177.8 25.6 176 134-356 74-293 (368)
19 3uq3_A Heat shock protein STI1 99.8 2.6E-19 8.9E-24 169.8 21.8 189 113-355 18-254 (258)
20 3ieg_A DNAJ homolog subfamily 99.8 1.8E-18 6.3E-23 171.7 26.8 203 112-358 83-350 (359)
21 4gco_A Protein STI-1; structur 99.8 7.8E-20 2.7E-24 157.2 14.2 122 149-305 4-125 (126)
22 3uq3_A Heat shock protein STI1 99.8 1E-18 3.6E-23 165.6 23.0 176 134-357 15-216 (258)
23 1fch_A Peroxisomal targeting s 99.8 2.6E-18 9E-23 172.3 25.8 196 112-347 76-318 (368)
24 2pzi_A Probable serine/threoni 99.8 2E-19 6.8E-24 197.9 17.7 168 135-357 402-577 (681)
25 2ho1_A Type 4 fimbrial biogene 99.8 3.2E-18 1.1E-22 162.7 23.4 167 133-353 80-248 (252)
26 3u4t_A TPR repeat-containing p 99.8 1.5E-18 5.2E-23 166.7 21.1 193 111-358 48-265 (272)
27 3as5_A MAMA; tetratricopeptide 99.8 1.2E-18 3.9E-23 156.3 18.9 161 134-348 18-178 (186)
28 2vq2_A PILW, putative fimbrial 99.8 4.9E-18 1.7E-22 157.5 23.2 168 134-355 18-189 (225)
29 2vq2_A PILW, putative fimbrial 99.8 1E-17 3.5E-22 155.3 24.8 188 113-354 21-222 (225)
30 2ho1_A Type 4 fimbrial biogene 99.8 8E-18 2.7E-22 159.9 23.9 169 134-356 47-217 (252)
31 3cv0_A Peroxisome targeting si 99.8 2.4E-17 8.1E-22 161.9 27.6 194 113-346 34-272 (327)
32 3vtx_A MAMA; tetratricopeptide 99.8 6.2E-18 2.1E-22 153.3 21.7 149 156-358 3-151 (184)
33 3fp2_A TPR repeat-containing p 99.8 7.6E-18 2.6E-22 177.8 25.1 200 112-355 255-503 (537)
34 2q7f_A YRRB protein; TPR, prot 99.8 3.1E-18 1.1E-22 161.2 19.7 170 134-357 33-202 (243)
35 3ieg_A DNAJ homolog subfamily 99.8 1.3E-17 4.3E-22 165.6 25.1 186 112-351 15-225 (359)
36 4ga2_A E3 SUMO-protein ligase 99.8 1.3E-19 4.4E-24 160.5 9.1 138 163-354 2-140 (150)
37 3cv0_A Peroxisome targeting si 99.8 2.8E-17 9.6E-22 161.3 26.4 177 134-357 31-249 (327)
38 1qqe_A Vesicular transport pro 99.8 1.4E-18 4.8E-23 170.9 16.6 178 114-349 31-234 (292)
39 2y4t_A DNAJ homolog subfamily 99.8 1.4E-17 4.6E-22 172.0 24.4 193 112-358 155-373 (450)
40 2xpi_A Anaphase-promoting comp 99.8 1.9E-17 6.6E-22 177.4 25.6 188 114-355 387-591 (597)
41 3qky_A Outer membrane assembly 99.8 6.2E-18 2.1E-22 162.7 19.5 187 134-360 25-241 (261)
42 3u4t_A TPR repeat-containing p 99.8 4.6E-18 1.6E-22 163.3 17.9 169 133-356 12-184 (272)
43 2y4t_A DNAJ homolog subfamily 99.8 2.5E-17 8.4E-22 170.0 24.5 187 113-353 39-250 (450)
44 3mkr_A Coatomer subunit epsilo 99.8 2.3E-17 7.8E-22 162.6 23.1 183 114-353 79-274 (291)
45 4abn_A Tetratricopeptide repea 99.8 3E-18 1E-22 180.5 17.8 167 112-310 114-307 (474)
46 1xnf_A Lipoprotein NLPI; TPR, 99.8 7.9E-17 2.7E-21 154.4 25.8 191 113-348 18-249 (275)
47 2pzi_A Probable serine/threoni 99.8 2E-18 6.8E-23 190.0 16.5 163 112-310 403-583 (681)
48 3hym_B Cell division cycle pro 99.8 2.6E-17 8.9E-22 161.8 22.0 179 113-345 35-224 (330)
49 3gyz_A Chaperone protein IPGC; 99.8 1.1E-18 3.7E-23 155.1 10.8 130 188-357 18-147 (151)
50 4i17_A Hypothetical protein; T 99.8 2.6E-17 8.8E-22 154.8 20.8 150 154-357 3-162 (228)
51 2vsy_A XCC0866; transferase, g 99.8 9E-18 3.1E-22 180.5 19.7 157 137-347 2-161 (568)
52 3gyz_A Chaperone protein IPGC; 99.8 1.6E-18 5.4E-23 154.1 10.6 119 142-295 20-138 (151)
53 4gco_A Protein STI-1; structur 99.8 1E-17 3.5E-22 143.9 14.1 120 197-356 4-123 (126)
54 2xpi_A Anaphase-promoting comp 99.8 1.2E-16 4.1E-21 171.2 25.7 198 112-356 317-558 (597)
55 3fp2_A TPR repeat-containing p 99.8 4.9E-17 1.7E-21 171.5 21.8 187 134-357 35-353 (537)
56 2r5s_A Uncharacterized protein 99.7 8.7E-18 3E-22 152.2 12.3 155 134-342 16-172 (176)
57 4g1t_A Interferon-induced prot 99.7 2E-16 6.8E-21 164.6 23.7 201 111-356 62-289 (472)
58 2yhc_A BAMD, UPF0169 lipoprote 99.7 1.2E-16 4.2E-21 150.6 19.4 168 134-348 14-218 (225)
59 4g1t_A Interferon-induced prot 99.7 5.6E-17 1.9E-21 168.8 18.5 173 111-311 105-297 (472)
60 2gw1_A Mitochondrial precursor 99.7 3.6E-17 1.2E-21 171.2 16.8 170 134-357 314-492 (514)
61 1p5q_A FKBP52, FK506-binding p 99.7 1.2E-17 4.1E-22 168.0 11.8 140 136-310 125-279 (336)
62 2vgx_A Chaperone SYCD; alterna 99.7 1.8E-17 6.1E-22 146.4 11.2 126 144-304 7-132 (148)
63 3qou_A Protein YBBN; thioredox 99.7 5.1E-17 1.8E-21 159.5 15.6 155 134-342 127-283 (287)
64 3urz_A Uncharacterized protein 99.7 2.1E-16 7.3E-21 147.3 17.7 139 156-346 2-156 (208)
65 1xnf_A Lipoprotein NLPI; TPR, 99.7 2.9E-16 1E-20 150.4 18.1 159 135-348 16-178 (275)
66 3dra_A Protein farnesyltransfe 99.7 1.8E-15 6.3E-20 149.7 23.8 194 112-356 28-228 (306)
67 3mkr_A Coatomer subunit epsilo 99.7 1.1E-15 3.9E-20 150.3 22.2 166 134-358 75-244 (291)
68 1qqe_A Vesicular transport pro 99.7 1.2E-16 4.2E-21 157.0 15.0 185 112-348 49-274 (292)
69 2gw1_A Mitochondrial precursor 99.7 1.7E-16 5.7E-21 166.1 16.1 191 113-357 250-458 (514)
70 2vgx_A Chaperone SYCD; alterna 99.7 4.4E-17 1.5E-21 143.9 9.2 123 189-351 4-126 (148)
71 2xcb_A PCRH, regulatory protei 99.7 9E-17 3.1E-21 140.3 11.1 130 145-309 5-134 (142)
72 2hr2_A Hypothetical protein; a 99.7 7.4E-17 2.5E-21 143.1 10.3 122 158-307 11-148 (159)
73 2ond_A Cleavage stimulation fa 99.7 2.1E-15 7.2E-20 149.1 22.1 153 140-346 80-238 (308)
74 3qky_A Outer membrane assembly 99.7 1.4E-15 4.9E-20 146.0 20.0 173 113-310 28-247 (261)
75 3edt_B KLC 2, kinesin light ch 99.7 5.2E-16 1.8E-20 148.5 16.6 165 133-344 52-282 (283)
76 2ond_A Cleavage stimulation fa 99.7 1.4E-15 4.7E-20 150.5 20.0 170 141-357 33-212 (308)
77 3upv_A Heat shock protein STI1 99.7 9.8E-16 3.4E-20 130.2 15.6 119 155-308 1-125 (126)
78 3nf1_A KLC 1, kinesin light ch 99.7 4.2E-16 1.4E-20 151.7 14.7 168 132-346 77-310 (311)
79 3q7a_A Farnesyltransferase alp 99.7 7E-15 2.4E-19 147.3 23.0 197 111-353 48-247 (349)
80 2fo7_A Synthetic consensus TPR 99.7 6.2E-15 2.1E-19 124.2 18.6 134 159-346 2-135 (136)
81 2e2e_A Formate-dependent nitri 99.7 8.2E-16 2.8E-20 138.6 13.4 131 134-299 20-153 (177)
82 3as5_A MAMA; tetratricopeptide 99.7 7.1E-15 2.4E-19 131.3 19.4 148 114-296 22-179 (186)
83 3sz7_A HSC70 cochaperone (SGT) 99.7 2.6E-15 9E-20 133.9 16.3 121 154-309 7-127 (164)
84 1dce_A Protein (RAB geranylger 99.6 7.9E-15 2.7E-19 157.6 22.5 191 137-357 42-235 (567)
85 2ifu_A Gamma-SNAP; membrane fu 99.6 1.4E-15 4.8E-20 150.5 14.9 182 113-348 29-228 (307)
86 2xcb_A PCRH, regulatory protei 99.6 3.7E-16 1.3E-20 136.3 9.1 122 192-353 4-125 (142)
87 3edt_B KLC 2, kinesin light ch 99.6 4.5E-16 1.5E-20 149.0 10.3 164 135-345 12-200 (283)
88 2vsy_A XCC0866; transferase, g 99.6 2.7E-15 9.4E-20 161.0 17.3 135 133-302 32-169 (568)
89 1zu2_A Mitochondrial import re 99.6 2.4E-15 8.3E-20 133.1 13.8 123 230-360 15-137 (158)
90 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 2.9E-16 9.8E-21 164.6 9.0 140 136-310 246-400 (457)
91 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.2E-14 4.1E-19 134.4 18.9 144 158-358 6-167 (213)
92 3qou_A Protein YBBN; thioredox 99.6 8.1E-15 2.8E-19 143.8 18.6 151 153-357 112-264 (287)
93 4a1s_A PINS, partner of inscut 99.6 1E-15 3.5E-20 156.0 12.3 187 113-346 61-295 (411)
94 3ulq_A Response regulator aspa 99.6 2.2E-15 7.6E-20 153.1 14.5 166 133-346 112-296 (383)
95 1ouv_A Conserved hypothetical 99.6 2.3E-14 8E-19 138.2 20.9 180 113-350 55-258 (273)
96 2lni_A Stress-induced-phosphop 99.6 4.2E-15 1.4E-19 126.0 13.7 122 154-310 12-133 (133)
97 3dss_A Geranylgeranyl transfer 99.6 8.5E-14 2.9E-18 138.8 25.2 176 140-349 90-273 (331)
98 1ouv_A Conserved hypothetical 99.6 6.7E-14 2.3E-18 135.0 23.9 178 114-349 20-221 (273)
99 3nf1_A KLC 1, kinesin light ch 99.6 7.1E-15 2.4E-19 143.0 17.1 166 134-346 37-227 (311)
100 1a17_A Serine/threonine protei 99.6 2.9E-14 1E-18 125.7 19.4 131 158-342 13-145 (166)
101 2fo7_A Synthetic consensus TPR 99.6 4E-14 1.4E-18 119.2 18.7 126 134-294 11-136 (136)
102 2vyi_A SGTA protein; chaperone 99.6 1.1E-14 3.8E-19 122.4 15.1 123 153-310 7-129 (131)
103 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.8E-14 6.2E-19 133.2 17.9 131 134-302 16-162 (213)
104 2fbn_A 70 kDa peptidylprolyl i 99.6 1.5E-15 5.2E-20 139.8 10.4 141 135-310 15-171 (198)
105 1zu2_A Mitochondrial import re 99.6 1.2E-14 4.3E-19 128.5 15.5 114 134-251 12-125 (158)
106 3sf4_A G-protein-signaling mod 99.6 2.7E-15 9.4E-20 151.7 12.9 188 113-347 22-260 (406)
107 3u3w_A Transcriptional activat 99.6 1.1E-14 3.6E-19 142.9 16.7 164 134-343 85-266 (293)
108 4gcn_A Protein STI-1; structur 99.6 1.2E-14 4.2E-19 124.5 14.9 110 157-302 7-123 (127)
109 3ro2_A PINS homolog, G-protein 99.6 3.6E-15 1.2E-19 145.8 13.1 198 113-347 18-296 (338)
110 1na0_A Designed protein CTPR3; 99.6 5.1E-14 1.8E-18 117.2 17.7 122 153-309 3-125 (125)
111 2r5s_A Uncharacterized protein 99.6 5.9E-15 2E-19 133.4 12.4 139 154-347 2-141 (176)
112 3dra_A Protein farnesyltransfe 99.6 1.3E-13 4.4E-18 136.4 23.0 208 117-353 50-298 (306)
113 3dss_A Geranylgeranyl transfer 99.6 2E-13 6.9E-18 136.0 24.5 194 137-360 42-240 (331)
114 3q49_B STIP1 homology and U bo 99.6 2.7E-14 9.1E-19 122.4 15.7 124 152-310 3-131 (137)
115 3upv_A Heat shock protein STI1 99.6 2.2E-14 7.5E-19 121.7 15.0 116 203-358 1-122 (126)
116 3q15_A PSP28, response regulat 99.6 1.3E-14 4.6E-19 147.2 15.5 165 134-346 111-293 (378)
117 3ulq_A Response regulator aspa 99.6 1.4E-14 4.8E-19 147.2 15.4 169 112-310 115-318 (383)
118 4a1s_A PINS, partner of inscut 99.6 9.6E-15 3.3E-19 148.8 13.6 173 134-347 58-256 (411)
119 3rkv_A Putative peptidylprolyl 99.6 2.3E-14 8E-19 127.4 14.2 119 157-310 10-147 (162)
120 2e2e_A Formate-dependent nitri 99.6 3.4E-14 1.2E-18 127.9 15.3 130 182-349 20-150 (177)
121 2qfc_A PLCR protein; TPR, HTH, 99.6 1.2E-13 4.2E-18 135.3 20.5 160 134-344 85-267 (293)
122 3sf4_A G-protein-signaling mod 99.6 1.9E-14 6.4E-19 145.5 15.1 187 112-346 99-339 (406)
123 1a17_A Serine/threonine protei 99.6 1.6E-13 5.5E-18 120.9 19.0 122 134-290 23-146 (166)
124 1hxi_A PEX5, peroxisome target 99.6 2.4E-14 8.1E-19 121.7 12.9 102 160-296 19-120 (121)
125 4gcn_A Protein STI-1; structur 99.6 5.6E-14 1.9E-18 120.3 14.7 106 205-350 7-119 (127)
126 1p5q_A FKBP52, FK506-binding p 99.6 1.2E-13 4E-18 138.7 19.1 123 133-290 156-294 (336)
127 1elw_A TPR1-domain of HOP; HOP 99.6 1.4E-13 4.6E-18 113.6 16.2 114 157-305 3-116 (118)
128 3rjv_A Putative SEL1 repeat pr 99.6 6.4E-14 2.2E-18 131.0 15.9 165 134-348 28-202 (212)
129 2c2l_A CHIP, carboxy terminus 99.6 3.8E-14 1.3E-18 138.6 14.9 165 155-354 1-175 (281)
130 2yhc_A BAMD, UPF0169 lipoprote 99.6 1.1E-13 3.6E-18 130.3 17.5 150 157-350 3-183 (225)
131 3sz7_A HSC70 cochaperone (SGT) 99.5 5.1E-14 1.8E-18 125.4 13.2 117 202-358 7-125 (164)
132 2hr2_A Hypothetical protein; a 99.5 3.1E-14 1.1E-18 126.2 11.0 103 206-348 11-136 (159)
133 3ro2_A PINS homolog, G-protein 99.5 4.8E-14 1.6E-18 137.7 13.5 187 112-346 95-335 (338)
134 2dba_A Smooth muscle cell asso 99.5 1.6E-13 5.6E-18 118.4 15.3 121 152-307 22-145 (148)
135 2c2l_A CHIP, carboxy terminus 99.5 1.1E-13 3.8E-18 135.2 15.3 166 134-342 14-198 (281)
136 4f3v_A ESX-1 secretion system 99.5 1.3E-14 4.3E-19 141.1 8.3 171 136-354 18-247 (282)
137 1dce_A Protein (RAB geranylger 99.5 1.9E-13 6.4E-18 146.9 17.8 170 116-310 45-241 (567)
138 2ooe_A Cleavage stimulation fa 99.5 2.7E-13 9.1E-18 144.2 18.6 163 141-347 255-458 (530)
139 1hxi_A PEX5, peroxisome target 99.5 1.8E-13 6E-18 116.3 13.5 101 208-348 19-119 (121)
140 2vyi_A SGTA protein; chaperone 99.5 1E-12 3.5E-17 110.2 18.1 109 134-267 22-130 (131)
141 3q15_A PSP28, response regulat 99.5 2.5E-13 8.7E-18 137.8 16.7 149 112-290 113-290 (378)
142 2ifu_A Gamma-SNAP; membrane fu 99.5 4.2E-14 1.4E-18 139.8 10.3 171 113-347 4-188 (307)
143 2if4_A ATFKBP42; FKBP-like, al 99.5 1.2E-14 4.1E-19 146.2 5.6 148 148-348 169-333 (338)
144 3q49_B STIP1 homology and U bo 99.5 4.2E-13 1.4E-17 114.8 14.5 117 200-356 3-124 (137)
145 1wao_1 Serine/threonine protei 99.5 7.8E-15 2.7E-19 154.6 4.2 118 158-310 6-125 (477)
146 3rjv_A Putative SEL1 repeat pr 99.5 3.1E-13 1.1E-17 126.3 14.6 154 142-356 4-170 (212)
147 3gw4_A Uncharacterized protein 99.5 2.2E-13 7.5E-18 124.4 13.0 163 135-345 3-178 (203)
148 1elr_A TPR2A-domain of HOP; HO 99.5 4.7E-13 1.6E-17 112.5 14.0 119 156-310 2-127 (131)
149 2fbn_A 70 kDa peptidylprolyl i 99.5 7.3E-14 2.5E-18 128.5 9.5 148 157-358 3-166 (198)
150 2lni_A Stress-induced-phosphop 99.5 3.5E-13 1.2E-17 113.9 13.0 108 134-266 26-133 (133)
151 2kck_A TPR repeat; tetratricop 99.5 2E-13 7E-18 111.6 11.1 107 153-294 1-110 (112)
152 3rkv_A Putative peptidylprolyl 99.5 4.7E-13 1.6E-17 118.8 14.3 122 205-359 10-143 (162)
153 1wao_1 Serine/threonine protei 99.5 6.1E-14 2.1E-18 147.7 9.5 127 134-295 16-155 (477)
154 2xev_A YBGF; tetratricopeptide 99.5 1.6E-12 5.4E-17 110.0 15.3 116 159-309 3-124 (129)
155 3q7a_A Farnesyltransferase alp 99.4 1.7E-12 5.7E-17 130.0 17.4 174 117-311 71-258 (349)
156 1elw_A TPR1-domain of HOP; HOP 99.4 4.6E-12 1.6E-16 104.2 16.4 104 134-262 14-117 (118)
157 1na0_A Designed protein CTPR3; 99.4 5E-12 1.7E-16 105.0 16.5 107 134-265 19-125 (125)
158 1ihg_A Cyclophilin 40; ppiase 99.4 1.3E-12 4.5E-17 133.0 15.6 118 158-310 223-356 (370)
159 2xm6_A Protein corresponding t 99.4 8.8E-12 3E-16 131.0 22.5 151 137-346 272-435 (490)
160 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 1.5E-12 5.2E-17 136.2 16.4 110 133-267 277-401 (457)
161 2if4_A ATFKBP42; FKBP-like, al 99.4 2E-13 6.8E-18 137.2 8.9 128 134-296 189-334 (338)
162 2dba_A Smooth muscle cell asso 99.4 4.5E-12 1.5E-16 109.2 15.7 119 200-358 22-143 (148)
163 2ooe_A Cleavage stimulation fa 99.4 6E-12 2E-16 133.7 19.4 177 118-348 304-497 (530)
164 3k9i_A BH0479 protein; putativ 99.4 4.5E-13 1.6E-17 112.4 8.3 107 136-267 2-111 (117)
165 2kck_A TPR repeat; tetratricop 99.4 1.1E-12 3.6E-17 107.2 9.8 107 201-347 1-110 (112)
166 1hz4_A MALT regulatory protein 99.4 7.2E-12 2.4E-16 126.2 17.7 164 134-344 24-204 (373)
167 3k9i_A BH0479 protein; putativ 99.4 7.4E-13 2.5E-17 111.1 8.4 102 186-308 4-108 (117)
168 2xev_A YBGF; tetratricopeptide 99.4 7E-12 2.4E-16 105.9 13.8 114 207-360 3-122 (129)
169 2xm6_A Protein corresponding t 99.4 7.1E-11 2.4E-15 124.1 24.3 150 137-345 236-398 (490)
170 2qfc_A PLCR protein; TPR, HTH, 99.4 3.3E-11 1.1E-15 117.8 20.0 149 113-290 88-266 (293)
171 3e4b_A ALGK; tetratricopeptide 99.3 3.3E-11 1.1E-15 125.8 20.3 163 134-350 186-358 (452)
172 1ihg_A Cyclophilin 40; ppiase 99.3 7.2E-12 2.5E-16 127.5 14.6 110 133-267 232-357 (370)
173 1hz4_A MALT regulatory protein 99.3 3E-11 1E-15 121.6 18.2 143 134-311 63-231 (373)
174 3ro3_A PINS homolog, G-protein 99.3 8.4E-12 2.9E-16 108.3 12.3 140 158-345 9-160 (164)
175 3u3w_A Transcriptional activat 99.3 9.1E-12 3.1E-16 121.8 13.1 149 113-290 88-266 (293)
176 1elr_A TPR2A-domain of HOP; HO 99.3 2.6E-11 8.8E-16 101.6 13.9 105 204-348 2-113 (131)
177 3ro3_A PINS homolog, G-protein 99.3 1.9E-11 6.3E-16 106.1 12.4 131 134-293 19-161 (164)
178 2kat_A Uncharacterized protein 99.3 6.6E-11 2.2E-15 98.5 13.2 100 190-310 3-104 (115)
179 4f3v_A ESX-1 secretion system 99.3 1.8E-11 6.2E-16 118.9 10.7 134 134-304 112-250 (282)
180 3gw4_A Uncharacterized protein 99.2 4.8E-11 1.7E-15 108.6 12.9 132 133-293 35-179 (203)
181 2kat_A Uncharacterized protein 99.2 6.8E-11 2.3E-15 98.3 12.2 101 142-267 3-105 (115)
182 2l6j_A TPR repeat-containing p 99.2 9.7E-12 3.3E-16 101.9 6.8 86 157-267 3-94 (111)
183 3e4b_A ALGK; tetratricopeptide 99.2 1.5E-10 5.2E-15 120.7 16.4 158 139-357 160-327 (452)
184 1xi4_A Clathrin heavy chain; a 99.2 9.5E-10 3.2E-14 125.1 23.6 212 112-358 1061-1324(1630)
185 1na3_A Designed protein CTPR2; 99.2 1.5E-10 5E-15 91.3 11.8 85 156-265 7-91 (91)
186 1na3_A Designed protein CTPR2; 99.2 1.3E-10 4.5E-15 91.5 11.2 85 204-309 7-91 (91)
187 3n71_A Histone lysine methyltr 99.2 8.5E-11 2.9E-15 123.7 13.0 130 134-291 319-465 (490)
188 3ly7_A Transcriptional activat 99.2 1.9E-09 6.6E-14 107.8 20.6 165 148-354 184-350 (372)
189 3n71_A Histone lysine methyltr 99.2 1.7E-10 5.9E-15 121.3 13.1 132 163-341 314-462 (490)
190 3mv2_B Coatomer subunit epsilo 99.1 1.3E-09 4.6E-14 107.0 17.8 164 134-352 110-291 (310)
191 2l6j_A TPR repeat-containing p 99.1 2.6E-10 9E-15 93.2 10.7 85 205-310 3-93 (111)
192 1xi4_A Clathrin heavy chain; a 99.1 8.8E-09 3E-13 117.3 23.3 170 112-309 1088-1328(1630)
193 4b4t_Q 26S proteasome regulato 99.1 1.1E-09 3.7E-14 112.1 14.8 164 134-345 14-206 (434)
194 3ma5_A Tetratricopeptide repea 99.1 6.9E-10 2.4E-14 90.3 10.4 90 153-267 2-93 (100)
195 2kc7_A BFR218_protein; tetratr 99.0 5.5E-10 1.9E-14 89.9 8.4 92 161-295 3-95 (99)
196 3ma5_A Tetratricopeptide repea 99.0 1.5E-09 5E-14 88.4 10.9 89 201-310 2-92 (100)
197 1klx_A Cysteine rich protein B 99.0 6.2E-09 2.1E-13 90.2 15.1 126 137-303 8-137 (138)
198 3ly7_A Transcriptional activat 99.0 6.7E-09 2.3E-13 103.9 16.4 152 117-296 194-345 (372)
199 4b4t_Q 26S proteasome regulato 99.0 6.9E-09 2.4E-13 106.1 15.0 162 134-343 65-245 (434)
200 2kc7_A BFR218_protein; tetratr 99.0 1.4E-09 4.9E-14 87.4 7.8 91 209-347 3-94 (99)
201 1klx_A Cysteine rich protein B 98.9 2.3E-08 8E-13 86.4 15.1 115 184-346 7-129 (138)
202 3u64_A Protein TP_0956; tetrat 98.9 2.9E-08 9.9E-13 95.6 16.8 177 142-347 50-273 (301)
203 3mv2_B Coatomer subunit epsilo 98.9 4.2E-08 1.4E-12 96.4 15.8 159 143-358 85-265 (310)
204 3u64_A Protein TP_0956; tetrat 98.8 3.4E-08 1.1E-12 95.2 13.9 155 115-293 102-272 (301)
205 3qwp_A SET and MYND domain-con 98.8 1.2E-08 4E-13 105.7 10.8 108 188-309 303-427 (429)
206 3qwp_A SET and MYND domain-con 98.8 1.9E-08 6.4E-13 104.2 11.0 114 134-265 297-427 (429)
207 3qww_A SET and MYND domain-con 98.8 1E-08 3.5E-13 106.1 8.5 97 188-298 314-424 (433)
208 1b89_A Protein (clathrin heavy 98.8 1.1E-08 3.7E-13 105.0 8.4 192 113-360 45-253 (449)
209 1b89_A Protein (clathrin heavy 98.8 9.6E-09 3.3E-13 105.4 7.8 154 112-309 73-255 (449)
210 3qww_A SET and MYND domain-con 98.7 2.2E-08 7.6E-13 103.6 9.0 97 136-252 310-422 (433)
211 4e6h_A MRNA 3'-END-processing 98.6 1.1E-06 3.7E-11 95.9 19.6 170 140-346 325-536 (679)
212 1pc2_A Mitochondria fission pr 98.6 3.3E-07 1.1E-11 80.1 11.9 105 137-263 11-117 (152)
213 1pc2_A Mitochondria fission pr 98.6 4.1E-07 1.4E-11 79.4 12.2 107 183-310 9-120 (152)
214 3bee_A Putative YFRE protein; 98.6 4.9E-07 1.7E-11 72.6 11.5 73 247-348 2-77 (93)
215 3bee_A Putative YFRE protein; 98.5 4.4E-07 1.5E-11 72.9 9.6 72 202-294 2-76 (93)
216 2v5f_A Prolyl 4-hydroxylase su 98.5 6.8E-07 2.3E-11 73.1 10.5 86 205-304 4-89 (104)
217 2v5f_A Prolyl 4-hydroxylase su 98.5 1.8E-06 6.3E-11 70.5 12.1 79 157-260 4-89 (104)
218 4e6h_A MRNA 3'-END-processing 98.4 9.9E-06 3.4E-10 88.3 18.7 168 135-349 354-576 (679)
219 2uy1_A Cleavage stimulation fa 97.9 0.00056 1.9E-08 71.8 20.0 145 140-310 195-369 (493)
220 1nzn_A CGI-135 protein, fissio 97.8 0.00023 7.9E-09 59.8 12.2 105 137-263 14-120 (126)
221 1nzn_A CGI-135 protein, fissio 97.8 0.00028 9.7E-09 59.3 11.6 101 187-305 16-118 (126)
222 4g26_A Pentatricopeptide repea 97.7 0.0073 2.5E-07 63.3 24.8 185 122-357 28-220 (501)
223 3ffl_A Anaphase-promoting comp 97.4 0.00059 2E-08 59.9 8.9 117 160-305 22-165 (167)
224 2dn6_A KIAA0640 protein; PH do 97.3 0.00018 6.3E-09 59.2 4.9 105 366-492 9-113 (115)
225 1btk_A Bruton'S tyrosine kinas 97.3 7.8E-05 2.7E-09 66.6 1.8 105 366-482 4-132 (169)
226 2lul_A Tyrosine-protein kinase 97.2 0.00015 5E-09 64.5 3.5 102 365-481 15-120 (164)
227 1y8m_A FIS1; mitochondria, unk 97.2 0.0047 1.6E-07 52.7 12.3 87 247-359 35-122 (144)
228 2uy1_A Cleavage stimulation fa 97.1 0.035 1.2E-06 57.9 20.9 149 135-310 224-399 (493)
229 3o48_A Mitochondria fission 1 97.1 0.006 2.1E-07 51.4 11.6 103 139-264 22-125 (134)
230 3ffl_A Anaphase-promoting comp 97.1 0.0018 6.1E-08 56.9 8.7 102 135-262 31-166 (167)
231 3o48_A Mitochondria fission 1 97.1 0.0056 1.9E-07 51.6 11.4 85 249-359 38-123 (134)
232 1y8m_A FIS1; mitochondria, unk 97.0 0.01 3.6E-07 50.6 12.8 101 140-263 22-123 (144)
233 1v5p_A Pleckstrin homology dom 97.0 0.00032 1.1E-08 59.3 2.9 101 367-483 17-121 (126)
234 4h7y_A Dual specificity protei 97.0 0.014 4.7E-07 50.3 12.8 124 200-358 7-139 (161)
235 4h7y_A Dual specificity protei 96.9 0.015 5E-07 50.1 12.2 128 152-310 7-142 (161)
236 1v5u_A SBF1, SET binding facto 96.9 0.00069 2.4E-08 55.9 3.8 94 366-480 9-109 (117)
237 1x1f_A Signal-transducing adap 96.8 0.001 3.5E-08 57.9 4.8 98 364-483 17-114 (149)
238 1v89_A Hypothetical protein KI 96.8 0.0013 4.5E-08 54.1 5.1 95 367-482 10-112 (118)
239 1pls_A Pleckstrin homology dom 96.8 0.0018 6E-08 53.1 5.8 85 383-484 18-103 (113)
240 1eaz_A Tandem PH domain contai 96.7 0.00045 1.5E-08 57.8 1.2 97 366-483 15-112 (125)
241 4g26_A Pentatricopeptide repea 96.6 0.11 3.8E-06 54.2 19.9 129 137-302 83-217 (501)
242 2cod_A Centaurin-delta 1; ARF 96.6 0.0012 4E-08 54.5 3.4 90 366-481 9-98 (115)
243 1wgq_A FYVE, rhogef and PH dom 96.5 0.002 6.7E-08 52.5 4.0 92 366-480 9-101 (109)
244 2d9v_A Pleckstrin homology dom 96.5 0.00084 2.9E-08 56.9 1.8 100 366-482 9-114 (130)
245 2dhk_A TBC1 domain family memb 96.3 0.0025 8.6E-08 52.9 3.9 98 366-486 9-108 (119)
246 2dkp_A Pleckstrin homology dom 96.3 0.0025 8.7E-08 53.3 4.0 96 366-482 22-119 (128)
247 2yry_A Pleckstrin homology dom 96.3 0.0026 8.9E-08 52.8 3.8 95 366-481 23-119 (122)
248 2d9y_A Pleckstrin homology dom 96.2 0.0036 1.2E-07 51.4 4.3 95 366-481 12-108 (117)
249 2i5f_A Pleckstrin; PH domain, 96.2 0.0032 1.1E-07 51.0 3.8 93 367-480 9-107 (109)
250 1upq_A PEPP1; PH domain, phosp 96.2 0.0041 1.4E-07 51.6 4.3 96 366-482 12-109 (123)
251 1u5d_A SKAP55, SRC kinase-asso 96.1 0.0033 1.1E-07 50.7 3.6 82 384-482 21-105 (108)
252 1x1g_A Pleckstrin 2; PH domain 96.1 0.0039 1.3E-07 52.3 3.9 94 366-480 19-122 (129)
253 1fao_A Dual adaptor of phospho 96.1 0.0034 1.2E-07 52.5 3.4 97 364-483 17-113 (126)
254 3aj4_A Pleckstrin homology dom 96.1 0.0028 9.7E-08 51.8 2.8 34 448-481 76-110 (112)
255 2d9x_A Oxysterol binding prote 96.1 0.0051 1.7E-07 51.0 4.4 87 383-488 21-110 (120)
256 1x05_A Pleckstrin; PH domain, 96.0 0.0034 1.2E-07 52.7 3.0 97 366-483 19-121 (129)
257 2rsg_A Collagen type IV alpha- 95.9 0.0025 8.6E-08 50.3 1.7 78 384-480 15-92 (94)
258 1wg7_A Dedicator of cytokinesi 95.8 0.0082 2.8E-07 51.8 4.9 99 366-482 19-124 (150)
259 1v88_A Oxysterol binding prote 95.8 0.0082 2.8E-07 50.8 4.5 92 366-482 9-124 (130)
260 2y7b_A Actin-binding protein a 95.7 0.0085 2.9E-07 50.5 4.4 88 383-483 20-129 (134)
261 2rlo_A Centaurin-gamma 1; spli 95.7 0.0084 2.9E-07 50.4 4.3 37 446-482 87-124 (128)
262 1dro_A Beta-spectrin; cytoskel 95.7 0.013 4.4E-07 48.7 5.4 91 382-482 28-119 (122)
263 1ya0_A SMG-7 transcript varian 95.6 0.053 1.8E-06 56.5 10.9 81 207-308 153-233 (497)
264 2d9w_A Docking protein 2; PH d 95.6 0.0097 3.3E-07 49.4 4.1 104 367-480 14-119 (127)
265 2j59_M RHO-GTPase activating p 95.5 0.0073 2.5E-07 53.3 3.4 84 383-481 26-110 (168)
266 1qqg_A IRS-1, insulin receptor 95.5 0.0059 2E-07 58.4 2.9 97 366-484 11-114 (264)
267 2ff4_A Probable regulatory pro 95.5 0.14 4.8E-06 51.6 13.1 95 137-249 128-244 (388)
268 2w2x_D 1-phosphatidylinositol- 95.4 0.0074 2.5E-07 50.5 3.0 91 383-481 25-118 (124)
269 2cof_A Protein KIAA1914; PH do 95.4 0.0077 2.6E-07 48.8 2.7 90 366-480 9-99 (107)
270 2p0d_A RHO GTPase-activating p 95.3 0.017 5.7E-07 48.7 4.9 93 384-483 32-125 (129)
271 3rcp_A Pleckstrin homology dom 95.3 0.012 4E-07 47.2 3.7 79 384-481 13-92 (103)
272 1fgy_A GRP1; PH domain, signal 95.3 0.013 4.3E-07 48.8 4.0 80 383-481 18-119 (127)
273 1u5e_A SRC-associated adaptor 95.3 0.011 3.7E-07 54.5 3.9 82 384-481 124-207 (211)
274 3cxb_B Pleckstrin homology dom 95.3 0.013 4.5E-07 48.0 4.0 83 383-482 17-101 (112)
275 1wi1_A Calcium-dependent activ 95.3 0.019 6.4E-07 48.1 4.9 95 366-481 9-109 (126)
276 3tca_A Amyloid beta A4 precurs 95.3 0.0072 2.5E-07 58.3 2.8 82 384-481 182-275 (291)
277 1u5f_A SRC-associated adaptor 95.2 0.013 4.6E-07 50.4 3.9 98 367-482 19-119 (148)
278 1wjm_A Beta-spectrin III; PH d 95.1 0.02 6.7E-07 47.6 4.5 88 383-482 29-117 (123)
279 3tfm_A Myosin X; split PH doma 95.1 0.0094 3.2E-07 55.6 2.7 79 384-482 77-155 (228)
280 1ya0_A SMG-7 transcript varian 95.0 0.12 4.2E-06 53.7 11.3 80 160-264 154-233 (497)
281 2da0_A 130-kDa phosphatidylino 95.0 0.018 6.3E-07 47.1 4.0 92 366-483 11-102 (114)
282 1btn_A Beta-spectrin; signal t 94.8 0.023 7.8E-07 45.5 4.1 85 383-479 20-105 (106)
283 4a6h_A Phosphatidylinositol 4, 94.8 0.022 7.6E-07 47.4 4.1 86 383-481 19-117 (120)
284 2d9z_A Protein kinase C, NU ty 94.8 0.053 1.8E-06 45.0 6.1 80 385-481 23-122 (129)
285 1zbp_A Hypothetical protein VP 94.5 0.9 3.1E-05 42.9 14.6 119 134-295 7-134 (273)
286 3mkq_A Coatomer beta'-subunit; 94.3 0.39 1.3E-05 52.4 13.7 89 188-286 668-761 (814)
287 2coc_A FYVE, rhogef and PH dom 94.2 0.043 1.5E-06 45.0 4.3 81 383-481 20-105 (112)
288 3mkq_A Coatomer beta'-subunit; 94.1 0.6 2.1E-05 50.8 14.7 121 136-310 664-798 (814)
289 1unq_A RAC-alpha serine/threon 94.0 0.017 5.8E-07 48.1 1.6 96 366-482 9-110 (125)
290 3lju_X ARF-GAP with dual PH do 93.8 0.056 1.9E-06 54.5 5.2 99 363-481 267-371 (386)
291 3a8p_A T-lymphoma invasion and 93.7 0.06 2.1E-06 51.3 5.0 89 384-484 37-126 (263)
292 2coa_A Protein kinase C, D2 ty 93.6 0.067 2.3E-06 44.2 4.3 81 384-481 22-118 (125)
293 2ff4_A Probable regulatory pro 93.4 0.86 3E-05 45.7 13.4 81 188-289 131-233 (388)
294 4h8s_A DCC-interacting protein 93.3 3.5 0.00012 41.5 17.8 78 383-480 317-396 (407)
295 3pp2_A RHO GTPase-activating p 93.2 0.071 2.4E-06 44.4 4.1 88 384-480 29-121 (124)
296 4gns_B Protein CSD3, chitin bi 93.1 0.66 2.3E-05 50.7 12.6 115 140-287 265-397 (754)
297 4gns_B Protein CSD3, chitin bi 92.8 1.8 6E-05 47.3 15.4 110 188-310 265-386 (754)
298 1v5m_A SH2 and PH domain-conta 92.2 0.23 7.9E-06 41.3 5.7 86 381-479 37-127 (136)
299 1dyn_A Dynamin; signal transdu 91.8 0.12 4E-06 42.9 3.5 93 365-478 12-113 (125)
300 3mkq_B Coatomer subunit alpha; 91.8 1.4 4.7E-05 39.0 10.7 99 136-287 17-115 (177)
301 2r09_A Cytohesin-3; autoinhibi 91.6 0.13 4.6E-06 50.9 4.3 92 366-481 214-327 (347)
302 2q13_A DCC-interacting protein 91.3 0.097 3.3E-06 52.7 3.1 78 384-481 295-374 (385)
303 2rov_A RHO-associated protein 91.1 0.14 4.9E-06 42.2 3.3 94 368-479 4-112 (117)
304 1wfd_A Hypothetical protein 15 90.6 1.2 4.1E-05 34.9 8.2 51 182-251 6-56 (93)
305 2w2u_A Hypothetical P60 katani 90.3 0.48 1.6E-05 36.4 5.5 46 186-250 14-59 (83)
306 2fjl_A 1-phosphatidylinositol- 89.8 0.34 1.2E-05 41.6 4.6 35 447-481 110-147 (150)
307 2cpt_A SKD1 protein, vacuolar 89.8 1.8 6.2E-05 35.5 8.9 47 187-252 14-60 (117)
308 2v6y_A AAA family ATPase, P60 89.4 0.56 1.9E-05 36.0 5.3 45 188-251 8-52 (83)
309 3lju_X ARF-GAP with dual PH do 88.9 0.14 4.9E-06 51.5 2.0 95 366-481 147-245 (386)
310 2crb_A Nuclear receptor bindin 88.8 1.8 6E-05 33.6 7.4 44 207-255 16-59 (97)
311 3hk0_A Growth factor receptor- 88.1 0.35 1.2E-05 45.6 4.0 87 383-482 145-240 (256)
312 3a8n_A TIAM-1, T-lymphoma inva 88.0 0.5 1.7E-05 45.1 4.9 90 383-484 36-126 (279)
313 2dtc_A RAL guanine nucleotide 88.0 0.2 6.7E-06 41.9 1.9 89 383-481 21-111 (126)
314 3txn_A 26S proteasome regulato 87.8 7.2 0.00025 39.0 13.6 97 209-341 102-208 (394)
315 3kae_A CDC27, possible protein 87.4 7.4 0.00025 34.1 11.4 119 137-298 15-151 (242)
316 4gmv_A RAS-associated and plec 87.2 0.4 1.4E-05 45.9 3.7 87 383-482 171-266 (281)
317 2wpv_A GET4, UPF0363 protein Y 87.1 10 0.00034 36.7 13.7 126 113-284 26-157 (312)
318 3txn_A 26S proteasome regulato 85.2 5.3 0.00018 40.0 11.1 124 138-290 73-210 (394)
319 2ys3_A UNC-112-related protein 84.3 0.69 2.4E-05 38.9 3.4 85 383-489 25-115 (137)
320 3lpz_A GET4 (YOR164C homolog); 84.1 28 0.00095 33.9 15.2 119 113-267 25-152 (336)
321 4b4t_R RPN7, 26S proteasome re 83.9 2.3 7.8E-05 43.2 7.8 105 155-291 128-238 (429)
322 2dl1_A Spartin; SPG20, MIT, st 83.0 3.4 0.00012 33.5 6.8 27 223-249 35-61 (116)
323 2v6x_A Vacuolar protein sortin 82.9 5.4 0.00018 30.4 7.8 45 187-250 9-53 (85)
324 3spa_A Mtrpol, DNA-directed RN 81.9 29 0.00099 39.2 15.9 98 158-290 127-230 (1134)
325 1zbp_A Hypothetical protein VP 81.8 21 0.00071 33.6 12.8 61 223-300 10-70 (273)
326 3kae_A CDC27, possible protein 79.9 31 0.001 30.3 15.6 76 135-233 44-137 (242)
327 1w1g_A HPDK1, 3-phosphoinositi 79.7 1.3 4.3E-05 38.0 3.4 78 385-485 65-142 (151)
328 3spa_A Mtrpol, DNA-directed RN 78.3 23 0.0008 39.9 13.7 92 122-235 129-226 (1134)
329 4b4t_S RPN3, 26S proteasome re 77.6 2.5 8.5E-05 43.8 5.5 123 135-294 147-303 (523)
330 4a5x_A MITD1, MIT domain-conta 77.3 17 0.00057 27.8 8.9 45 188-251 13-57 (86)
331 4b4t_P 26S proteasome regulato 71.8 21 0.00072 36.2 10.8 101 158-290 137-247 (445)
332 4b4t_R RPN7, 26S proteasome re 71.0 9.2 0.00031 38.6 7.8 86 187-290 112-197 (429)
333 4f7h_A Fermitin family homolog 70.6 2 6.9E-05 37.2 2.3 85 383-489 63-153 (173)
334 1mai_A Phospholipase C delta-1 68.3 4.7 0.00016 33.5 4.1 57 425-481 54-120 (131)
335 4fhn_B Nucleoporin NUP120; pro 66.7 46 0.0016 38.1 13.3 99 198-310 834-953 (1139)
336 4bbk_A Kindlin-1, fermitin fam 66.6 2.5 8.5E-05 36.3 2.0 85 383-489 42-132 (165)
337 4fhn_B Nucleoporin NUP120; pro 65.7 24 0.00083 40.4 10.7 97 150-271 834-958 (1139)
338 4ejn_A RAC-alpha serine/threon 65.7 3.5 0.00012 41.7 3.3 94 366-481 7-107 (446)
339 2wpv_A GET4, UPF0363 protein Y 65.3 98 0.0034 29.6 16.9 107 113-233 46-157 (312)
340 1qsa_A Protein (soluble lytic 62.3 1.6E+02 0.0055 31.1 16.1 114 188-342 230-347 (618)
341 4b4t_S RPN3, 26S proteasome re 56.4 25 0.00084 36.4 7.6 125 188-347 152-303 (523)
342 3eab_A Spastin; spastin, MIT, 54.2 11 0.00036 29.1 3.4 46 187-248 12-57 (89)
343 1qsa_A Protein (soluble lytic 53.6 69 0.0024 33.9 10.9 80 188-289 268-347 (618)
344 3mkq_B Coatomer subunit alpha; 51.3 1.2E+02 0.0042 26.3 13.9 35 188-231 21-55 (177)
345 4gq2_M Nucleoporin NUP120; bet 50.5 1.7E+02 0.0058 32.6 14.0 86 197-296 831-933 (950)
346 3lpz_A GET4 (YOR164C homolog); 47.2 2E+02 0.007 27.7 23.8 152 113-288 48-214 (336)
347 1wy6_A Hypothetical protein ST 46.4 87 0.003 26.4 7.9 53 135-201 102-154 (172)
348 2w2u_A Hypothetical P60 katani 45.2 27 0.00094 26.4 4.5 35 114-153 14-48 (83)
349 2v6y_A AAA family ATPase, P60 43.0 31 0.0011 26.0 4.5 33 116-153 8-40 (83)
350 2ymb_A MITD1, MIT domain-conta 42.8 5.1 0.00018 37.4 0.0 46 186-250 18-63 (257)
351 3qtm_A Uncharacterized protein 40.7 2.3E+02 0.0079 26.5 15.0 196 138-347 99-333 (346)
352 4b4t_P 26S proteasome regulato 40.3 2.9E+02 0.01 27.5 14.7 89 134-240 147-248 (445)
353 3re2_A Predicted protein; meni 38.9 78 0.0027 31.0 7.5 67 156-238 253-324 (472)
354 1wy6_A Hypothetical protein ST 38.5 1.2E+02 0.0042 25.5 7.7 78 137-237 74-152 (172)
355 2adz_A Alpha-1-syntrophin; pro 36.9 31 0.0011 30.2 4.1 35 444-478 137-173 (178)
356 3rau_A Tyrosine-protein phosph 36.5 1.9E+02 0.0066 28.1 10.4 39 158-201 117-155 (363)
357 4a5x_A MITD1, MIT domain-conta 35.0 47 0.0016 25.2 4.4 35 114-153 11-45 (86)
358 2crb_A Nuclear receptor bindin 34.3 60 0.0021 25.1 4.7 30 158-201 15-44 (97)
359 2ijq_A Hypothetical protein; s 33.9 1.9E+02 0.0066 24.7 8.6 64 162-241 36-106 (161)
360 2cpt_A SKD1 protein, vacuolar 32.6 51 0.0018 26.6 4.5 34 115-153 14-47 (117)
361 1wfd_A Hypothetical protein 15 32.3 50 0.0017 25.5 4.2 35 114-153 10-44 (93)
362 3ax2_A Mitochondrial import re 31.8 1E+02 0.0034 22.7 5.5 34 162-209 21-54 (73)
363 2v6x_A Vacuolar protein sortin 31.6 59 0.002 24.4 4.5 34 115-153 9-42 (85)
364 3u84_A Menin; MLL, JUND, ledgf 30.6 1.2E+02 0.0042 30.3 7.4 43 191-237 298-345 (550)
365 1z87_A Alpha-1-syntrophin; pro 29.6 47 0.0016 31.1 4.3 33 447-479 225-259 (263)
366 3t5v_B Nuclear mRNA export pro 29.5 3.4E+02 0.012 27.3 11.0 100 184-294 138-254 (455)
367 3r9m_A BRO1 domain-containing 29.3 3.5E+02 0.012 26.3 10.9 105 158-290 114-282 (376)
368 4gq4_A Menin; tumor suppressor 28.5 1.4E+02 0.0048 29.8 7.5 66 156-237 260-330 (489)
369 3t5x_A PCI domain-containing p 27.5 1.2E+02 0.0041 26.9 6.5 36 159-208 15-50 (203)
370 4ady_A RPN2, 26S proteasome re 27.2 6.5E+02 0.022 28.0 13.4 109 133-267 420-540 (963)
371 4gq2_M Nucleoporin NUP120; bet 26.7 2.2E+02 0.0076 31.6 10.0 45 137-199 823-867 (950)
372 3ax2_A Mitochondrial import re 26.2 1.3E+02 0.0043 22.1 5.2 34 255-298 21-54 (73)
373 3tfm_A Myosin X; split PH doma 26.1 86 0.0029 28.3 5.4 51 426-478 175-225 (228)
374 2xs1_A Programmed cell death 6 26.0 3.9E+02 0.013 28.5 11.4 38 158-200 127-164 (704)
375 1zc3_B Exocyst complex protein 25.9 75 0.0026 25.3 4.4 51 429-481 56-106 (113)
376 2zan_A Vacuolar protein sortin 25.4 15 0.00051 37.3 0.0 44 188-250 8-51 (444)
377 3lxu_X Tripeptidyl-peptidase 2 25.0 8.3E+02 0.028 28.3 14.1 33 139-171 1122-1154(1354)
378 3esl_A Checkpoint serine/threo 24.1 3.8E+02 0.013 23.8 10.5 107 113-238 23-143 (202)
379 4gq4_A Menin; tumor suppressor 21.4 5.9E+02 0.02 25.4 10.4 85 205-305 261-353 (489)
380 1zb1_A BRO1 protein; AIP1, BRO 20.9 3.2E+02 0.011 26.7 8.8 36 158-201 123-158 (392)
381 2o8p_A 14-3-3 domain containin 20.1 4.4E+02 0.015 23.8 8.7 69 161-241 123-199 (227)
382 3t5x_A PCI domain-containing p 20.1 1.8E+02 0.0062 25.6 6.2 35 251-295 14-48 (203)
No 1
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.91 E-value=5.5e-23 Score=186.97 Aligned_cols=172 Identities=16% Similarity=0.207 Sum_probs=162.5
Q ss_pred HHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh
Q 010864 122 LINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL 201 (498)
Q Consensus 122 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 201 (498)
++.+++.. +..+|++++|+..|+++++++|+++.+|+++|.+|..+|+ +++|+..+.+++..
T Consensus 7 iy~~lG~~----~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~--------------~~~a~~~~~~~~~~ 68 (184)
T 3vtx_A 7 IYMDIGDK----KRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGL--------------PNDAIESLKKFVVL 68 (184)
T ss_dssp HHHHHHHH----HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhc
Confidence 34444444 7789999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 202 CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 202 ~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
+|++..++.++|.++.. .++++.|. ..+.+++.++|++..++..+|.+|..+|++ ++|+
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~a~-------~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~ 127 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFM----IDEKQAAI-------DALQRAIALNTVYADAYYKLGLVYDSMGEH----------DKAI 127 (184)
T ss_dssp CCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred CchhHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCccchHHHHHHHHHHHHhCCc----------hhHH
Confidence 99999999999999999 99999999 689999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHH
Q 010864 282 SKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 351 (498)
Q Consensus 282 ~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~ 351 (498)
..|+++++++|+++.+++++|.+|..+|+ +.+|..+|+++++++|++..|.
T Consensus 128 ~~~~~~l~~~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~a~~~ 178 (184)
T 3vtx_A 128 EAYEKTISIKPGFIRAYQSIGLAYEGKGL-------------------RDEAVKYFKKALEKEEKKAKYE 178 (184)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHTTHHHHHHC
T ss_pred HHHHHHHHhcchhhhHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHhCCccCHHHH
Confidence 99999999999999999999999999999 9999999999999999887653
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.91 E-value=5.2e-23 Score=193.79 Aligned_cols=170 Identities=16% Similarity=0.092 Sum_probs=161.3
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++++|+++.+++++|.++..+|+ +++|+..|+++++++|++..+++++|
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~lg 80 (217)
T 2pl2_A 15 LYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGL--------------VNPALENGKTLVARTPRYLGGYMVLS 80 (217)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHH
Q 010864 214 IAISDRAKMR-----------GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAIS 282 (498)
Q Consensus 214 ~~~~~~~~~~-----------g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~ 282 (498)
.++.. + |++++|+ ..|+++++++|+++.+++++|.+|..+|++ ++|+.
T Consensus 81 ~~~~~----~~~~~~~~~~~~g~~~~A~-------~~~~~al~~~P~~~~~~~~lg~~~~~~g~~----------~~A~~ 139 (217)
T 2pl2_A 81 EAYVA----LYRQAEDRERGKGYLEQAL-------SVLKDAERVNPRYAPLHLQRGLVYALLGER----------DKAEA 139 (217)
T ss_dssp HHHHH----HHHTCSSHHHHHHHHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHH
T ss_pred HHHHH----hhhhhhhhcccccCHHHHH-------HHHHHHHHhCcccHHHHHHHHHHHHHcCCh----------HHHHH
Confidence 99999 7 7777777 799999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 283 KFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 283 ~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
.|+++++++ +++.+++++|.+|..+|+ +.+|..+|+++++++|++......+..+.
T Consensus 140 ~~~~al~~~-~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~P~~~~~~~~la~~~ 195 (217)
T 2pl2_A 140 SLKQALALE-DTPEIRSALAELYLSMGR-------------------LDEALAQYAKALEQAPKDLDLRVRYASAL 195 (217)
T ss_dssp HHHHHHHHC-CCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHhcc-cchHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 999999999 999999999999999999 99999999999999999997766665543
No 3
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.90 E-value=6.3e-23 Score=210.30 Aligned_cols=177 Identities=12% Similarity=0.048 Sum_probs=159.8
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g-~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
+...|++++|+..|+++|+++|++..+|+++|.++..+| + +++|+.+|+++++++|++..+|+++
T Consensus 107 ~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d--------------~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD--------------LHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccC--------------HHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 456899999999999999999999999999999999999 6 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
|.++.. +|++++|+ ..|+++++++|++..+|+++|.++..+|++ ++|+.+|+++|+++|
T Consensus 173 g~~~~~----~g~~~eAl-------~~~~kal~ldP~~~~a~~~lg~~~~~~g~~----------~eAl~~~~~al~l~P 231 (382)
T 2h6f_A 173 RVLVEW----LRDPSQEL-------EFIADILNQDAKNYHAWQHRQWVIQEFKLW----------DNELQYVDQLLKEDV 231 (382)
T ss_dssp HHHHHH----HTCCTTHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCC----------TTHHHHHHHHHHHCT
T ss_pred HHHHHH----ccCHHHHH-------HHHHHHHHhCccCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHhCC
Confidence 999999 99999999 799999999999999999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 293 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 293 ~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
++..+|+++|.+|..++.. .....+..++.+|.+++.++|++......++.+-
T Consensus 232 ~~~~a~~~lg~~l~~l~~~-------------~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll 284 (382)
T 2h6f_A 232 RNNSVWNQRYFVISNTTGY-------------NDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL 284 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCS-------------CSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCc-------------chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 9999999999999994430 0111234457999999999999997666665543
No 4
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.90 E-value=2.9e-22 Score=205.35 Aligned_cols=195 Identities=11% Similarity=0.021 Sum_probs=168.6
Q ss_pred hhcHHHHHHHHHHhhhcc----------hhhHHhhcc-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCC
Q 010864 113 AEQNNAAMELINSVTGVD----------EEGRSRQRI-LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------~~~~~~~g~-~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~ 181 (498)
.+++++|+..+.+++..+ +..+..+|+ +++|+.+|+++++++|+++.+|+++|.+|..+|+
T Consensus 110 ~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~-------- 181 (382)
T 2h6f_A 110 DERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD-------- 181 (382)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------
T ss_pred CCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC--------
Confidence 467888999998888877 334567896 9999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 261 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l 261 (498)
+++|+.+|+++|+++|++..+|+++|.++.. +|++++|+ .+|+++++++|++..+|+++|.+|
T Consensus 182 ------~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~----~g~~~eAl-------~~~~~al~l~P~~~~a~~~lg~~l 244 (382)
T 2h6f_A 182 ------PSQELEFIADILNQDAKNYHAWQHRQWVIQE----FKLWDNEL-------QYVDQLLKEDVRNNSVWNQRYFVI 244 (382)
T ss_dssp ------CTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCTTHH-------HHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhCccCHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 799999999999999999999999
Q ss_pred HH-hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHH
Q 010864 262 QE-LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAA 340 (498)
Q Consensus 262 ~~-~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 340 (498)
.. .|.+++|. ++.++.+|++||+++|++..+|+++|.+|...|.. .+.++..++.++
T Consensus 245 ~~l~~~~~eA~-----~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~-----------------~~~~a~~~~~~~ 302 (382)
T 2h6f_A 245 SNTTGYNDRAV-----LEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS-----------------KYPNLLNQLLDL 302 (382)
T ss_dssp HHTTCSCSHHH-----HHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGG-----------------GCHHHHHHHHHH
T ss_pred HHhcCcchHHH-----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCcc-----------------chHHHHHHHHHh
Confidence 99 66661111 13336999999999999999999999999998731 057788888887
Q ss_pred HhcCCCHHHHHHHHH
Q 010864 341 HALKPSYSVYSSALR 355 (498)
Q Consensus 341 l~l~p~~~~~~~~l~ 355 (498)
+.+|++......+.
T Consensus 303 -~~~p~~~~al~~La 316 (382)
T 2h6f_A 303 -QPSHSSPYLIAFLV 316 (382)
T ss_dssp -TTTCCCHHHHHHHH
T ss_pred -ccCCCCHHHHHHHH
Confidence 88898875544443
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.89 E-value=1.7e-22 Score=222.79 Aligned_cols=159 Identities=28% Similarity=0.346 Sum_probs=152.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+..+|++++|+.+|+++++++|+++.+|+++|.+|..+|+ +++|+..|++|++++|+++.+|++||
T Consensus 19 ~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~--------------~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 19 KREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 6679999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.+|.. +|++++|+ .+|+++++++|+++.+++++|.+|..+|++ ++|+.+|++|++++|+
T Consensus 85 ~~l~~----~g~~~~A~-------~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~----------~eAi~~~~~Al~l~P~ 143 (723)
T 4gyw_A 85 NTLKE----MQDVQGAL-------QCYTRAIQINPAFADAHSNLASIHKDSGNI----------PEAIASYRTALKLKPD 143 (723)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCSC
T ss_pred HHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCC
Confidence 99999 99999999 699999999999999999999999999999 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 294 FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 294 ~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
++.++++||.+|..+|+ +.+|.++|++++++.|+
T Consensus 144 ~~~a~~~L~~~l~~~g~-------------------~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 144 FPDAYCNLAHCLQIVCD-------------------WTDYDERMKKLVSIVAD 177 (723)
T ss_dssp CHHHHHHHHHHHHHTTC-------------------CTTHHHHHHHHHHHHHH
T ss_pred ChHHHhhhhhHHHhccc-------------------HHHHHHHHHHHHHhChh
Confidence 99999999999999998 77788888888877654
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.89 E-value=6.4e-22 Score=186.26 Aligned_cols=176 Identities=14% Similarity=0.147 Sum_probs=151.5
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh----------
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES---------- 171 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~---------- 171 (498)
..+++++|+..+.+++..+ +..+..+|++++|+..|+++++++|+++.+++++|.++..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 96 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERG 96 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhccc
Confidence 3577888999998888776 34567889999999999999999999999999999999999
Q ss_pred -cCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 172 -ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 172 -g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+ ..|+++++++ ++
T Consensus 97 ~g~--------------~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~-~~ 150 (217)
T 2pl2_A 97 KGY--------------LEQALSVLKDAERVNPRYAPLHLQRGLVYAL----LGERDKAE-------ASLKQALALE-DT 150 (217)
T ss_dssp HHH--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHC-CC
T ss_pred ccC--------------HHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHhcc-cc
Confidence 88 9999999999999999999999999999999 99999999 6999999999 99
Q ss_pred HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHH
Q 010864 251 PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELY 330 (498)
Q Consensus 251 ~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (498)
+.+++++|.+|..+|++ ++|+..|+++++++|+++.+++++|.++..+|+ +
T Consensus 151 ~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~-------------------~ 201 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRL----------DEALAQYAKALEQAPKDLDLRVRYASALLLKGK-------------------A 201 (217)
T ss_dssp HHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHTC-----------------------
T ss_pred hHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHccC-------------------H
Confidence 99999999999999999 999999999999999999999999999999998 7
Q ss_pred HHHHHHHHHHHh
Q 010864 331 SQSAIYIAAAHA 342 (498)
Q Consensus 331 ~~A~~~~~~Al~ 342 (498)
.+|..+|+++..
T Consensus 202 ~~A~~~~~~~~~ 213 (217)
T 2pl2_A 202 EEAARAAALEHH 213 (217)
T ss_dssp ------------
T ss_pred HHHHHHHHHHhh
Confidence 888888877653
No 7
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.88 E-value=1.8e-21 Score=183.36 Aligned_cols=191 Identities=17% Similarity=0.243 Sum_probs=167.3
Q ss_pred HHhhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNP-EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P-~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
+...|++++|+..|+++++++| .+..+++++|.++..+|+ +++|+..|+++++++|++..+++++
T Consensus 17 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~l 82 (228)
T 4i17_A 17 ALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKK--------------YKEAADYFDIAIKKNYNLANAYIGK 82 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHTTCSHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhc--------------HHHHHHHHHHHHHhCcchHHHHHHH
Confidence 6779999999999999999999 999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHH
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP-------QALNNWGLALQELSAIVPAREKQTIVRTAISKFR 285 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~-------~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~ 285 (498)
|.+|.. +|++++|+ ..|+++++++|++. .+++++|.++..+|++ ++|+.+|+
T Consensus 83 ~~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~ 141 (228)
T 4i17_A 83 SAAYRD----MKNNQEYI-------ATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNI----------EKAEENYK 141 (228)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHH
T ss_pred HHHHHH----cccHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccH----------HHHHHHHH
Confidence 999999 99999999 69999999999999 6688889998888888 99999999
Q ss_pred HHHHhcCC--CHHHHHHHHHHHHHcchhHHhccCCCCCCC--------CChhHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010864 286 AAIQLQFD--FHRAIYNLGTVLYGLAEDTLRTGGTVNPRE--------VSPNELYSQSAIYIAAAHALKPSYSVYSSALR 355 (498)
Q Consensus 286 ~Al~l~P~--~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~ 355 (498)
++++++|+ +..+++++|.+|..+|+.....+..+.... ......+.+|..+|+++++++|++......+.
T Consensus 142 ~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~ 221 (228)
T 4i17_A 142 HATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQD 221 (228)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 99999999 999999999999999986333322211111 01123568999999999999999998877777
Q ss_pred HHHc
Q 010864 356 LVRS 359 (498)
Q Consensus 356 ~~~~ 359 (498)
.++.
T Consensus 222 ~i~~ 225 (228)
T 4i17_A 222 QVKA 225 (228)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.86 E-value=3.6e-20 Score=188.34 Aligned_cols=162 Identities=21% Similarity=0.201 Sum_probs=107.8
Q ss_pred hcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCc
Q 010864 114 EQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 183 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~ 183 (498)
+++++|...+.+++... +..+...|++++|+..|+++++++|++..+++++|.++...|+
T Consensus 149 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~---------- 218 (388)
T 1w3b_A 149 GRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI---------- 218 (388)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC----------
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC----------
Confidence 55666666666555443 2234456666777777777777777777777777777766666
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
+++|+..|++++.++|++..+++++|.++.. .|++++|+ ..|+++++++|+++.+++++|.++..
T Consensus 219 ----~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~~ 283 (388)
T 1w3b_A 219 ----FDRAVAAYLRALSLSPNHAVVHGNLACVYYE----QGLIDLAI-------DTYRRAIELQPHFPDAYCNLANALKE 283 (388)
T ss_dssp ----TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHTCSSCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhhCcCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 6677777777777777766677777777766 67766666 57777777777777777777777777
Q ss_pred hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 264 LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 264 ~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
.|++ ++|+..|++++++.|++..+++++|.++...|+
T Consensus 284 ~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 320 (388)
T 1w3b_A 284 KGSV----------AEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HSCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred cCCH----------HHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCC
Confidence 7777 556666666666555555555556655555555
No 9
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=178.72 Aligned_cols=201 Identities=13% Similarity=0.083 Sum_probs=153.4
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQR-ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDST 180 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g-~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~ 180 (498)
..+++++|...+.+++... +..+...| ++++|+.+|++++.++|+++.+|+.+|.++...|+
T Consensus 68 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~------- 140 (330)
T 3hym_B 68 ELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESE------- 140 (330)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTC-------
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccC-------
Confidence 4567788888887777655 23345667 88888888888888888888888888888888888
Q ss_pred CCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010864 181 SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 260 (498)
Q Consensus 181 ~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~ 260 (498)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++.+|++..+++++|.+
T Consensus 141 -------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 141 -------HDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL----TNNSKLAE-------RFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp -------HHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHhccccHHHHHHHHHHHHH----HhhHHHHH-------HHHHHHHHhCCCChHHHHHHHHH
Confidence 8888888888888888888888888888888 88888888 68888888888888888889988
Q ss_pred HHHhcCcchH---------------------------------HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 010864 261 LQELSAIVPA---------------------------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG 307 (498)
Q Consensus 261 l~~~g~~~~a---------------------------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~ 307 (498)
+...|++++| +...|++++|+.+|+++++++|++..+++++|.+|..
T Consensus 203 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 282 (330)
T 3hym_B 203 AFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSL 282 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHH
Confidence 8888888554 1124556777777777777777777777777777777
Q ss_pred cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 308 LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+|+ +.+|..+|+++++++|++......+..
T Consensus 283 ~g~-------------------~~~A~~~~~~al~~~p~~~~~~~~l~~ 312 (330)
T 3hym_B 283 MGN-------------------FENAVDYFHTALGLRRDDTFSVTMLGH 312 (330)
T ss_dssp HTC-------------------HHHHHHHHHTTTTTCSCCHHHHHHHHH
T ss_pred hcc-------------------HHHHHHHHHHHHccCCCchHHHHHHHH
Confidence 776 677777777777777777654444443
No 10
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.85 E-value=6.5e-20 Score=193.27 Aligned_cols=195 Identities=16% Similarity=0.138 Sum_probs=169.0
Q ss_pred hcHHHHHHHHHHhhhcc----------hhhHHhhccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCC
Q 010864 114 EQNNAAMELINSVTGVD----------EEGRSRQRIL-TFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSP 182 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~----------~~~~~~~g~~-~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~ 182 (498)
...+.++..+....... +..+...|++ ++|+.+|+++++++|+++.+|+++|.+|..+|+
T Consensus 82 ~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~--------- 152 (474)
T 4abn_A 82 EEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGD--------- 152 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---------
Confidence 34555666665544332 3346678999 999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010864 183 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR--GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 260 (498)
Q Consensus 183 ~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~--g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~ 260 (498)
+++|+.+|+++++++|+ ..+++++|.+|.. + +...+....|++|+..|+++++++|++..+|+++|.+
T Consensus 153 -----~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~----~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 222 (474)
T 4abn_A 153 -----VTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ----LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNA 222 (474)
T ss_dssp -----HHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT----CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH----hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999 7999999999998 8 4444444445555589999999999999999999999
Q ss_pred HHHh--------cCcchHHhhhhhHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHH
Q 010864 261 LQEL--------SAIVPAREKQTIVRTAISKFRAAIQLQF---DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNEL 329 (498)
Q Consensus 261 l~~~--------g~~~~a~~~~~~~~~Ai~~~~~Al~l~P---~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 329 (498)
|..+ |++ ++|+.+|+++++++| +++.+++++|.+|..+|+
T Consensus 223 ~~~~~~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~------------------- 273 (474)
T 4abn_A 223 YLSLYFNTGQNPKIS----------QQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEES------------------- 273 (474)
T ss_dssp HHHHHHHTTCCHHHH----------HHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHhhccccchH----------HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCC-------------------
Confidence 9999 888 999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 330 YSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 330 ~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+.+|..+|+++++++|++......+..
T Consensus 274 ~~~A~~~~~~al~l~p~~~~a~~~l~~ 300 (474)
T 4abn_A 274 YGEALEGFSQAAALDPAWPEPQQREQQ 300 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 999999999999999999855544443
No 11
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.85 E-value=1.8e-19 Score=181.36 Aligned_cols=176 Identities=18% Similarity=0.203 Sum_probs=156.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+.+.|++++|+.+|++++..+|+++.+|+.+|.+|..+|+ +++|+..|+++++++|++..+++++|
T Consensus 75 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (365)
T 4eqf_A 75 RLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENEN--------------EQAAIVALQRCLELQPNNLKALMALA 140 (365)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4667888888888888888888888888888888888888 88888888888888888888888888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH-------------------------------------HHHHHHHHHhcCCC--CHHHH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQ-------------------------------------ATKNYEKAVQLNWN--SPQAL 254 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~-------------------------------------Al~~~~~Al~l~P~--~~~a~ 254 (498)
.+|.. +|++++|++.|++ |+..|+++++++|+ ++.++
T Consensus 141 ~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 216 (365)
T 4eqf_A 141 VSYTN----TSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQ 216 (365)
T ss_dssp HHHHH----TTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHH
T ss_pred HHHHc----cccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHH
Confidence 88888 8888888876543 55688999999999 99999
Q ss_pred HHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHH
Q 010864 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSA 334 (498)
Q Consensus 255 ~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~ 334 (498)
+++|.+|..+|++ ++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|.
T Consensus 217 ~~l~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~-------------------~~~A~ 267 (365)
T 4eqf_A 217 TGLGVLFHLSGEF----------NRAIDAFNAALTVRPEDYSLWNRLGATLANGDR-------------------SEEAV 267 (365)
T ss_dssp HHHHHHHHHHTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHH
T ss_pred HHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------------HHHHH
Confidence 9999999999999 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHH
Q 010864 335 IYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 335 ~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
.+|+++++++|++......+..
T Consensus 268 ~~~~~al~~~p~~~~~~~~l~~ 289 (365)
T 4eqf_A 268 EAYTRALEIQPGFIRSRYNLGI 289 (365)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhcCCCchHHHHHHHH
Confidence 9999999999998855554444
No 12
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.85 E-value=8.8e-20 Score=171.90 Aligned_cols=172 Identities=22% Similarity=0.205 Sum_probs=162.2
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
.+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|+..|+++++++|++..+++++
T Consensus 66 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 131 (243)
T 2q7f_A 66 LLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEM--------------YKEAKDMFEKALRAGMENGDLFYML 131 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 36678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
|.++.. .|++++|+ ..|+++++.+|++..+++++|.++...|++ ++|+..|+++++..|
T Consensus 132 a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~~~~~~ 190 (243)
T 2q7f_A 132 GTVLVK----LEQPKLAL-------PYLQRAVELNENDTEARFQFGMCLANEGML----------DEALSQFAAVTEQDP 190 (243)
T ss_dssp HHHHHH----TSCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCC----------HHHHHHHHHHHHHCT
T ss_pred HHHHHH----hccHHHHH-------HHHHHHHHhCCccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCc
Confidence 999999 99999999 688999999999999999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 293 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 293 ~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
++..+++++|.+|..+|+ +.+|..+|+++++++|++......+..+.
T Consensus 191 ~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 191 GHADAFYNAGVTYAYKEN-------------------REKALEMLDKAIDIQPDHMLALHAKKLLG 237 (243)
T ss_dssp TCHHHHHHHHHHHHHTTC-------------------TTHHHHHHHHHHHHCTTCHHHHHHHTC--
T ss_pred ccHHHHHHHHHHHHHccC-------------------HHHHHHHHHHHHccCcchHHHHHHHHHHH
Confidence 999999999999999999 89999999999999999997776655443
No 13
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.85 E-value=2.5e-20 Score=205.48 Aligned_cols=151 Identities=25% Similarity=0.355 Sum_probs=143.0
Q ss_pred hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 153 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 153 ~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
..|+++++|++||.+|.++|+ +++|++.|++|++++|++..+|++||.+|.. +|++++|+
T Consensus 4 s~P~~a~al~nLG~~~~~~G~--------------~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~----~g~~~eA~-- 63 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGN--------------IEEAVRLYRKALEVFPEFAAAHSNLASVLQQ----QGKLQEAL-- 63 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCCCcHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH--
Confidence 469999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010864 233 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 312 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~ 312 (498)
.+|++|++++|+++.++++||.+|..+|++ ++|+.+|++|++++|+++.++++||.+|..+|+
T Consensus 64 -----~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~----------~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~-- 126 (723)
T 4gyw_A 64 -----MHYKEAIRISPTFADAYSNMGNTLKEMQDV----------QGALQCYTRAIQINPAFADAHSNLASIHKDSGN-- 126 (723)
T ss_dssp -----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--
T ss_pred -----HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--
Confidence 699999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 313 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+.+|+.+|+++++++|++......+..+
T Consensus 127 -----------------~~eAi~~~~~Al~l~P~~~~a~~~L~~~ 154 (723)
T 4gyw_A 127 -----------------IPEAIASYRTALKLKPDFPDAYCNLAHC 154 (723)
T ss_dssp -----------------HHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHhCCCChHHHhhhhhH
Confidence 9999999999999999998666555544
No 14
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.85 E-value=5.8e-21 Score=169.22 Aligned_cols=142 Identities=12% Similarity=-0.032 Sum_probs=135.3
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+..+|++++|+..|++++..+|+++.+++.+|.+|+.+|+ |++|+..|+++++++|+++.+|+++|
T Consensus 7 ~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~--------------~~~A~~~~~~al~~~p~~~~a~~~lg 72 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKE--------------YDLAKKYICTYINVQERDPKAHRFLG 72 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHH-HHHHHHhcC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK-FRAAIQLQF 292 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~-~~~Al~l~P 292 (498)
.+|.. +|++++|+ .+|+++++++|+++.+++++|.+|.++|++ ++|+.. +++|++++|
T Consensus 73 ~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~~~~----------~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 73 LLYEL----EENTDKAV-------ECYRRSVELNPTQKDLVLKIAELLCKNDVT----------DGRAKYWVERAAKLFP 131 (150)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHCSS----------SSHHHHHHHHHHHHST
T ss_pred HHHHH----cCchHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHhCc
Confidence 99999 99999999 699999999999999999999999999999 887765 599999999
Q ss_pred CCHHHHHHHHHHHHHcch
Q 010864 293 DFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 293 ~~~~a~~~Lg~~~~~~g~ 310 (498)
+++.++..++.++...|+
T Consensus 132 ~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 132 GSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp TCHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 999999999999998885
No 15
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.84 E-value=4.8e-20 Score=172.20 Aligned_cols=163 Identities=18% Similarity=0.105 Sum_probs=145.8
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYN----------------WALVLQESADNVSLDSTSPSKDALLEEACKKYDE 197 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~----------------lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~ 197 (498)
+...|++++|+.+|+++++++|+++.+|+. +|.+|..+|+ +++|+..|++
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~ 79 (208)
T 3urz_A 14 AIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRN--------------YDKAYLFYKE 79 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCC--------------HHHHHHHHHH
Confidence 467899999999999999999999999999 9999999999 9999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 198 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 198 Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
+++++|++..+++++|.++.. +|++++|+ ..|+++++++|+++.+++++|.+|...|+. ..
T Consensus 80 al~~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~P~~~~a~~~lg~~~~~~~~~--------~~ 140 (208)
T 3urz_A 80 LLQKAPNNVDCLEACAEMQVC----RGQEKDAL-------RMYEKILQLEADNLAANIFLGNYYYLTAEQ--------EK 140 (208)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHHHH--------HH
T ss_pred HHHHCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHcCCCCHHHHHHHHHHHHHHhHH--------HH
Confidence 999999999999999999999 99999999 799999999999999999999999887753 22
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHH
Q 010864 278 RTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSV 349 (498)
Q Consensus 278 ~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~ 349 (498)
+.++..|++++...|. ..+++++|.++..+|+ +.+|+.+|+++++++|+...
T Consensus 141 ~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~-------------------~~~A~~~~~~al~l~P~~~~ 192 (208)
T 3urz_A 141 KKLETDYKKLSSPTKM-QYARYRDGLSKLFTTR-------------------YEKARNSLQKVILRFPSTEA 192 (208)
T ss_dssp HHHHHHHC---CCCHH-HHHHHHHHHHHHHHHT-------------------HHHHHHHHHHHTTTSCCHHH
T ss_pred HHHHHHHHHHhCCCch-hHHHHHHHHHHHHccC-------------------HHHHHHHHHHHHHhCCCHHH
Confidence 6778888888754443 3578899999999998 99999999999999998763
No 16
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.84 E-value=2.1e-19 Score=182.67 Aligned_cols=176 Identities=30% Similarity=0.332 Sum_probs=107.4
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAI 214 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~ 214 (498)
...|++++|+..+++++..+|.++.+|+.+|.+|...|+ +++|+..|+++++++|++..+++++|.
T Consensus 44 ~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l~~ 109 (388)
T 1w3b_A 44 FQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQ--------------LQEAIEHYRHALRLKPDFIDGYINLAA 109 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHcCcchHHHHHHHHH
Confidence 344555555555555555555555555555555555555 555555555555555555555555555
Q ss_pred HHHHHHHHcCCHHHHHHHHH---------------------------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 215 AISDRAKMRGRTKEAEELWK---------------------------QATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 215 ~~~~~~~~~g~~~eA~~~~~---------------------------~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
++.. .|++++|++.|+ +|+..|+++++.+|++..+++++|.++...|++
T Consensus 110 ~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 185 (388)
T 1w3b_A 110 ALVA----AGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI 185 (388)
T ss_dssp HHHH----HSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 5555 555555552111 111456666666666666666666666666666
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
++|+..|+++++++|++..+++++|.++...|+ +.+|..+|.+++.++|++
T Consensus 186 ----------~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~-------------------~~~A~~~~~~al~~~p~~ 236 (388)
T 1w3b_A 186 ----------WLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI-------------------FDRAVAAYLRALSLSPNH 236 (388)
T ss_dssp ----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC-------------------TTHHHHHHHHHHHHCTTC
T ss_pred ----------HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHhhCcCC
Confidence 777777777777777777777777777777776 677778888888888877
Q ss_pred HHHHHHHHHH
Q 010864 348 SVYSSALRLV 357 (498)
Q Consensus 348 ~~~~~~l~~~ 357 (498)
......+..+
T Consensus 237 ~~~~~~l~~~ 246 (388)
T 1w3b_A 237 AVVHGNLACV 246 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7555544443
No 17
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.84 E-value=1.8e-19 Score=181.44 Aligned_cols=196 Identities=18% Similarity=0.189 Sum_probs=174.5
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcC------
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNV------ 175 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~------ 175 (498)
..+++++|+..+.+++... +..+...|++++|+.+|+++++++|+++.+|+++|.+|..+|+..
T Consensus 77 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 156 (365)
T 4eqf_A 77 KEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEAL 156 (365)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHH
Confidence 4578889999998888765 345677899999999999999999999999999999999999841
Q ss_pred ------CC------------------CCCCCchhhhHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHcCCHHHH
Q 010864 176 ------SL------------------DSTSPSKDALLEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAKMRGRTKEA 229 (498)
Q Consensus 176 ------~~------------------~~~~~~~~~~~~~A~~~~~~Al~l~p~--~~~a~~~lg~~~~~~~~~~g~~~eA 229 (498)
.+ -+..+...+++++|+..|+++++++|+ ++.+++++|.++.. +|++++|
T Consensus 157 ~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~----~g~~~~A 232 (365)
T 4eqf_A 157 KNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL----SGEFNRA 232 (365)
T ss_dssp HHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH----HTCHHHH
T ss_pred HHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH----CCCHHHH
Confidence 01 033556678899999999999999999 89999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 230 EELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 230 ~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
+ ..|+++++++|+++.+++++|.+|...|++ ++|+.+|+++++++|++..+++++|.+|..+|
T Consensus 233 ~-------~~~~~al~~~p~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 295 (365)
T 4eqf_A 233 I-------DAFNAALTVRPEDYSLWNRLGATLANGDRS----------EEAVEAYTRALEIQPGFIRSRYNLGISCINLG 295 (365)
T ss_dssp H-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred H-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhcCCCchHHHHHHHHHHHHCC
Confidence 9 699999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 310 EDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
+ +.+|..+|++++++.|+.
T Consensus 296 ~-------------------~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 296 A-------------------YREAVSNFLTALSLQRKS 314 (365)
T ss_dssp C-------------------CHHHHHHHHHHHHHHHCC
T ss_pred C-------------------HHHHHHHHHHHHHhCccc
Confidence 9 899999999999999874
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.84 E-value=4.6e-19 Score=177.83 Aligned_cols=176 Identities=18% Similarity=0.205 Sum_probs=160.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++.+|+++.+++.+|.+|...|+ +++|+..|+++++++|++..+++++|
T Consensus 74 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~l~ 139 (368)
T 1fch_A 74 RLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQ--------------ELLAISALRRCLELKPDNQTALMALA 139 (368)
T ss_dssp HHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcC--------------HHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHH------------------------------------------HHHHHHHHHHhcCCC--
Q 010864 214 IAISDRAKMRGRTKEAEELWK------------------------------------------QATKNYEKAVQLNWN-- 249 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~------------------------------------------~Al~~~~~Al~l~P~-- 249 (498)
.++.. .|++++|++.|+ +|+..|+++++++|+
T Consensus 140 ~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 215 (368)
T 1fch_A 140 VSFTN----ESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSI 215 (368)
T ss_dssp HHHHH----TTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred HHHHH----cCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcc
Confidence 99999 999999887665 456789999999999
Q ss_pred CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHH
Q 010864 250 SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNEL 329 (498)
Q Consensus 250 ~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 329 (498)
++.+++++|.++...|++ ++|+.+|+++++++|+++.+++++|.++...|+
T Consensus 216 ~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~------------------- 266 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEY----------DKAVDCFTAALSVRPNDYLLWNKLGATLANGNQ------------------- 266 (368)
T ss_dssp CHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------
T ss_pred cHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCC-------------------
Confidence 899999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 330 YSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 330 ~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+.+|..+|+++++++|++......+..
T Consensus 267 ~~~A~~~~~~al~~~~~~~~~~~~l~~ 293 (368)
T 1fch_A 267 SEEAVAAYRRALELQPGYIRSRYNLGI 293 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 999999999999999998855554444
No 19
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.6e-19 Score=169.77 Aligned_cols=189 Identities=17% Similarity=0.156 Sum_probs=169.7
Q ss_pred hhcHHHHHHHHHHhhhcc---------hhhHHhhccHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHhcCcCC
Q 010864 113 AEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPED-------YDALYNWALVLQESADNVS 176 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~---------~~~~~~~g~~~~A~~~~~~al~~~P~~-------~~a~~~lg~~~~~~g~~~~ 176 (498)
.+++++|+..+.+++... +..+...|++++|+..|+++++++|++ +.+++.+|.+|..+|+
T Consensus 18 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 94 (258)
T 3uq3_A 18 ARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGD--- 94 (258)
T ss_dssp TTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC---
T ss_pred hccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHccc---
Confidence 467777888777766543 345677899999999999999999887 7999999999999999
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Q 010864 177 LDSTSPSKDALLEEACKKYDEATR--------------------------LCPTLHDAFYNWAIAISDRAKMRGRTKEAE 230 (498)
Q Consensus 177 ~~~~~~~~~~~~~~A~~~~~~Al~--------------------------l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~ 230 (498)
+++|+..|++++. .+|++..+++++|.++.. .|++++|+
T Consensus 95 -----------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~ 159 (258)
T 3uq3_A 95 -----------LKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFT----KSDWPNAV 159 (258)
T ss_dssp -----------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----TTCHHHHH
T ss_pred -----------HHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH----hcCHHHHH
Confidence 8888888888888 677788899999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 231 ELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 231 ~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
..|+++++.+|++..+++++|.++...|++ ++|+.+|+++++++|++..+++++|.+|..+|+
T Consensus 160 -------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 222 (258)
T 3uq3_A 160 -------KAYTEMIKRAPEDARGYSNRAAALAKLMSF----------PEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 222 (258)
T ss_dssp -------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred -------HHHHHHHhcCcccHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 699999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC------CCHHHHHHHHH
Q 010864 311 DTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK------PSYSVYSSALR 355 (498)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~------p~~~~~~~~l~ 355 (498)
+.+|..+|+++++++ |++......+.
T Consensus 223 -------------------~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~ 254 (258)
T 3uq3_A 223 -------------------YASALETLDAARTKDAEVNNGSSAREIDQLYY 254 (258)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred -------------------HHHHHHHHHHHHHhChhhcCCCchHHHHHHHH
Confidence 999999999999999 88876655543
No 20
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.83 E-value=1.8e-18 Score=171.67 Aligned_cols=203 Identities=13% Similarity=0.040 Sum_probs=162.8
Q ss_pred hhhcHHHHHHHHHHhhhcch-------------------------hhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010864 112 LAEQNNAAMELINSVTGVDE-------------------------EGRSRQRILTFAAKRYANAIERNPEDYDALYNWAL 166 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~~-------------------------~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 166 (498)
..+++++|...+.+++.... ..+...|++++|+..|++++..+|+++.++..+|.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 162 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAE 162 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45777888888887766543 34567899999999999999999999999999999
Q ss_pred HHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc
Q 010864 167 VLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL 246 (498)
Q Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l 246 (498)
++...|+ +++|+..|+++++++|++..+++++|.++.. .|++++|+. .|+++++.
T Consensus 163 ~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~-------~~~~a~~~ 217 (359)
T 3ieg_A 163 CFIKEGE--------------PRKAISDLKAASKLKSDNTEAFYKISTLYYQ----LGDHELSLS-------EVRECLKL 217 (359)
T ss_dssp HHHHTTC--------------HHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH----HTCHHHHHH-------HHHHHHHH
T ss_pred HHHHCCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHH-------HHHHHHhh
Confidence 9999999 9999999999999999999999999999999 999999995 44444444
Q ss_pred CCCCHHHHH------------HHHHHHHHhcCcchH----------------------------HhhhhhHHHHHHHHHH
Q 010864 247 NWNSPQALN------------NWGLALQELSAIVPA----------------------------REKQTIVRTAISKFRA 286 (498)
Q Consensus 247 ~P~~~~a~~------------~lg~~l~~~g~~~~a----------------------------~~~~~~~~~Ai~~~~~ 286 (498)
+|++..++. .+|.++...|++++| +...|++++|+..|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 297 (359)
T 3ieg_A 218 DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSE 297 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 444444332 224444444444333 1123444999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 287 AIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 287 Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
+++++|+++.+++++|.+|..+|+ +.+|..+|+++++++|++......+..+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~-------------------~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 350 (359)
T 3ieg_A 298 VLQMEPDNVNALKDRAEAYLIEEM-------------------YDEAIQDYEAAQEHNENDQQIREGLEKAQ 350 (359)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 999999999999999999999998 89999999999999999887666665544
No 21
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.82 E-value=7.8e-20 Score=157.16 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=115.8
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHH
Q 010864 149 NAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKE 228 (498)
Q Consensus 149 ~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~e 228 (498)
++..+||+.++++.++|.+|+..|+ |++|+..|+++++++|+++.+|+++|.+|.. +|++++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~----~~~~~~ 65 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGD--------------YPTAMRHYNEAVKRDPENAILYSNRAACLTK----LMEFQR 65 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh----hccHHH
Confidence 4556899999999999999999999 9999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 229 AEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305 (498)
Q Consensus 229 A~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~ 305 (498)
|+ ..|+++++++|++..+|+++|.+|..+|++ ++|+..|+++++++|++..++.+|+.++
T Consensus 66 A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~~~~----------~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 66 AL-------DDCDTCIRLDSKFIKGYIRKAACLVAMREW----------SKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HH-------HHHHHHHHhhhhhhHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99 699999999999999999999999999999 9999999999999999999999999875
No 22
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1e-18 Score=165.56 Aligned_cols=176 Identities=17% Similarity=0.130 Sum_probs=164.0
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC-------H
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-------H 206 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~-------~ 206 (498)
+...|++++|+.+|+++++.+ +++.+++.+|.+|..+|+ +++|+..|+++++++|++ .
T Consensus 15 ~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~ 79 (258)
T 3uq3_A 15 FYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGE--------------YETAISTLNDAVEQGREMRADYKVIS 79 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHhCcccccchHHHH
Confidence 677999999999999999999 999999999999999999 999999999999999887 7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------------HHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATK-------------------NYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~-------------------~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
.+++++|.++.. .|++++|++.|++++. .+++++..+|.+..+++++|.++...|++
T Consensus 80 ~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T 3uq3_A 80 KSFARIGNAYHK----LGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDW 155 (258)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHH----cccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCH
Confidence 999999999999 9999999988877665 68888889999999999999999999999
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
++|+.+|+++++++|+++.+++++|.++..+|+ +.+|..+|.++++++|++
T Consensus 156 ----------~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 156 ----------PNAVKAYTEMIKRAPEDARGYSNRAAALAKLMS-------------------FPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp ----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTC
T ss_pred ----------HHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCC-------------------HHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999999999999999 999999999999999998
Q ss_pred HHHHHHHHHH
Q 010864 348 SVYSSALRLV 357 (498)
Q Consensus 348 ~~~~~~l~~~ 357 (498)
......+..+
T Consensus 207 ~~~~~~l~~~ 216 (258)
T 3uq3_A 207 VRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8655544443
No 23
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.82 E-value=2.6e-18 Score=172.29 Aligned_cols=196 Identities=19% Similarity=0.201 Sum_probs=174.9
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcC------
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNV------ 175 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~------ 175 (498)
..+++++|+..+.+++... +..+...|++++|+..|+++++++|+++.+++.+|.+|...|+..
T Consensus 76 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 155 (368)
T 1fch_A 76 QEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEIL 155 (368)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4578889999998888765 345678899999999999999999999999999999999998841
Q ss_pred ------CCCC-----------------------CCCchhhhHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHcC
Q 010864 176 ------SLDS-----------------------TSPSKDALLEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAKMRG 224 (498)
Q Consensus 176 ------~~~~-----------------------~~~~~~~~~~~A~~~~~~Al~l~p~--~~~a~~~lg~~~~~~~~~~g 224 (498)
.+.. ......+++++|+..|+++++++|+ +..+++++|.++.. .|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~----~g 231 (368)
T 1fch_A 156 RDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNL----SG 231 (368)
T ss_dssp HHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHH----TT
T ss_pred HHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHH----cC
Confidence 1110 0112457889999999999999999 89999999999999 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 225 RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV 304 (498)
Q Consensus 225 ~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~ 304 (498)
++++|+ ..|++++.++|+++.+++++|.++...|++ ++|+..|+++++++|++..+++++|.+
T Consensus 232 ~~~~A~-------~~~~~al~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 232 EYDKAV-------DCFTAALSVRPNDYLLWNKLGATLANGNQS----------EEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHH-------HHHHHHHHhCcCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999999 688999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 305 LYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 305 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
|..+|+ +.+|..+|++++++.|++
T Consensus 295 ~~~~g~-------------------~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGA-------------------HREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTC-------------------HHHHHHHHHHHHHHHHTC
T ss_pred HHHCCC-------------------HHHHHHHHHHHHHhCCCC
Confidence 999999 999999999999999987
No 24
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.81 E-value=2e-19 Score=197.94 Aligned_cols=168 Identities=8% Similarity=-0.021 Sum_probs=159.8
Q ss_pred HhhccHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH
Q 010864 135 SRQRILTFAAKRYANAI--------ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH 206 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al--------~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 206 (498)
...|++++|+..|++++ +.+|++.++++.+|.+|..+|+ +++|+..|+++++++|++.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~p~~~ 467 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGD--------------VAKATRKLDDLAERVGWRW 467 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHCCCH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCC--------------HHHHHHHHHHHhccCcchH
Confidence 45799999999999999 9999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHH
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRA 286 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~ 286 (498)
.+|+++|.++.. +|++++|+ ..|+++++++|+++.+++++|.+|.++|++ ++ +.+|++
T Consensus 468 ~a~~~lg~~~~~----~g~~~~A~-------~~~~~al~l~P~~~~~~~~lg~~~~~~g~~----------~~-~~~~~~ 525 (681)
T 2pzi_A 468 RLVWYRAVAELL----TGDYDSAT-------KHFTEVLDTFPGELAPKLALAATAELAGNT----------DE-HKFYQT 525 (681)
T ss_dssp HHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHSTTCSHHHHHHHHHHHHHTCC----------CT-TCHHHH
T ss_pred HHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHcCCh----------HH-HHHHHH
Confidence 999999999999 99999999 799999999999999999999999999999 99 999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 287 AIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 287 Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
|++++|++..+++++|.+|..+|+ +.+|+.+|+++++++|++......+..+
T Consensus 526 al~~~P~~~~a~~~lg~~~~~~g~-------------------~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 526 VWSTNDGVISAAFGLARARSAEGD-------------------RVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HHHhCCchHHHHHHHHHHHHHcCC-------------------HHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999998666655554
No 25
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.81 E-value=3.2e-18 Score=162.66 Aligned_cols=167 Identities=19% Similarity=0.161 Sum_probs=151.6
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH--hCCCCHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR--LCPTLHDAFY 210 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~--l~p~~~~a~~ 210 (498)
.+...|++++|+..|+++++.+|++..+++.+|.+|...|+ +++|+..|++++. .+|.+..+++
T Consensus 80 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 145 (252)
T 2ho1_A 80 VFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKR--------------YEEAYQRLLEASQDTLYPERSRVFE 145 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHTTCTTCTTHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhH--------------HHHHHHHHHHHHhCccCcccHHHHH
Confidence 45678999999999999999999999999999999999999 9999999999999 8888889999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 211 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 211 ~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
++|.++.. .|++++|+ ..|+++++.+|.+..++..+|.++..+|++ ++|+.+|+++++.
T Consensus 146 ~la~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~~~~ 204 (252)
T 2ho1_A 146 NLGLVSLQ----MKKPAQAK-------EYFEKSLRLNRNQPSVALEMADLLYKEREY----------VPARQYYDLFAQG 204 (252)
T ss_dssp HHHHHHHH----TTCHHHHH-------HHHHHHHHHCSCCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTT
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHhcCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHh
Confidence 99999999 99999988 688888888999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010864 291 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSA 353 (498)
Q Consensus 291 ~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~ 353 (498)
.|++..++..++.++...|+ +.+|..++++++++.|++..+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~g~-------------------~~~A~~~~~~~~~~~p~~~~~~~~ 248 (252)
T 2ho1_A 205 GGQNARSLLLGIRLAKVFED-------------------RDTAASYGLQLKRLYPGSLEYQEF 248 (252)
T ss_dssp SCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTSHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHccC-------------------HHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999998 899999999999999998866543
No 26
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.81 E-value=1.5e-18 Score=166.66 Aligned_cols=193 Identities=12% Similarity=0.033 Sum_probs=166.2
Q ss_pred hhhhcHHHHHHHHHHhhhcc-------------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCC
Q 010864 111 QLAEQNNAAMELINSVTGVD-------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSL 177 (498)
Q Consensus 111 q~~~~~~~A~~~~~~~~~~~-------------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~ 177 (498)
...+++++|+..+.+++... +..+...|++++|+.+|+++++++|+++.++.++|.+|..+|+
T Consensus 48 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~---- 123 (272)
T 3u4t_A 48 YELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGN---- 123 (272)
T ss_dssp HHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC----
T ss_pred HHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccC----
Confidence 35678889999888887622 3345677999999999999999999999999999999999999
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 010864 178 DSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA-IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN 256 (498)
Q Consensus 178 ~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg-~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~ 256 (498)
+++|+..|+++++++|++..+++++| .+|. .+++++|+ ..|+++++++|++..++++
T Consensus 124 ----------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-----~~~~~~A~-------~~~~~a~~~~p~~~~~~~~ 181 (272)
T 3u4t_A 124 ----------FPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-----NKEYVKAD-------SSFVKVLELKPNIYIGYLW 181 (272)
T ss_dssp ----------HHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-----TTCHHHHH-------HHHHHHHHHSTTCHHHHHH
T ss_pred ----------HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-----HHHHHHHH-------HHHHHHHHhCccchHHHHH
Confidence 99999999999999999999999999 5554 55777777 7999999999999999999
Q ss_pred HHHHHHHhcC---cchHHhhhhhHHHHHHHHHHHHHhc---CC-----CHHHHHHHHHHHHHcchhHHhccCCCCCCCCC
Q 010864 257 WGLALQELSA---IVPAREKQTIVRTAISKFRAAIQLQ---FD-----FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVS 325 (498)
Q Consensus 257 lg~~l~~~g~---~~~a~~~~~~~~~Ai~~~~~Al~l~---P~-----~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~ 325 (498)
+|.++..+|+ + ++|+..|++++++. |+ ...++.++|.+|...|+
T Consensus 182 ~~~~~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------- 236 (272)
T 3u4t_A 182 RARANAAQDPDTKQ----------GLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRD--------------- 236 (272)
T ss_dssp HHHHHHHHSTTCSS----------CTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHcCcchhh----------HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCC---------------
Confidence 9999999998 8 99999999999986 55 24789999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 326 PNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 326 ~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
+.+|..+|+++++++|++......+..+.
T Consensus 237 ----~~~A~~~~~~al~~~p~~~~a~~~l~~~~ 265 (272)
T 3u4t_A 237 ----KVKADAAWKNILALDPTNKKAIDGLKMKL 265 (272)
T ss_dssp ----HHHHHHHHHHHHHHCTTCHHHHHHHC---
T ss_pred ----HHHHHHHHHHHHhcCccHHHHHHHhhhhh
Confidence 99999999999999999998877766544
No 27
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.81 E-value=1.2e-18 Score=156.29 Aligned_cols=161 Identities=12% Similarity=0.079 Sum_probs=154.8
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++.+|.++...|+ +++|+..|+++++++|++..+++++|
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a 83 (186)
T 3as5_A 18 HAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGA--------------VDRGTELLERSLADAPDNVKVATVLG 83 (186)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.++.. .|++++|+ ..|++++..+|++..++.++|.++...|++ ++|+.+|+++++..|+
T Consensus 84 ~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~~ 142 (186)
T 3as5_A 84 LTYVQ----VQKYDLAV-------PLLIKVAEANPINFNVRFRLGVALDNLGRF----------DEAIDSFKIALGLRPN 142 (186)
T ss_dssp HHHHH----HTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTT
T ss_pred HHHHH----hcCHHHHH-------HHHHHHHhcCcHhHHHHHHHHHHHHHcCcH----------HHHHHHHHHHHhcCcc
Confidence 99999 99999999 688899999999999999999999999999 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 294 FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 294 ~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
+..+++++|.++...|+ +.+|..+|+++++++|++.
T Consensus 143 ~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 143 EGKVHRAIAFSYEQMGR-------------------HEEALPHFKKANELDEGAS 178 (186)
T ss_dssp CHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHCCC
T ss_pred chHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHcCCCch
Confidence 99999999999999999 8999999999999888754
No 28
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.81 E-value=4.9e-18 Score=157.49 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=153.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++.+|++..+++.+|.+|...|+ +++|+..|++++.++|++..+++++|
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l~ 83 (225)
T 2vq2_A 18 YMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKV--------------NDKAQESFRQALSIKPDSAEINNNYG 83 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC--------------hHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 214 IAISDRAKMR-GRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 214 ~~~~~~~~~~-g~~~eA~~~~~~Al~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
.++.. . |++++|+ ..|+++++ .+|.+..+++++|.++...|++ ++|+.+|+++++.
T Consensus 84 ~~~~~----~~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 84 WFLCG----RLNRPAESM-------AYFDKALADPTYPTPYIANLNKGICSAKQGQF----------GLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHT----TTCCHHHHH-------HHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHH----hcCcHHHHH-------HHHHHHHcCcCCcchHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHh
Confidence 99999 9 9999999 57777777 6677889999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCC-CHHHHHHHHH
Q 010864 291 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP-SYSVYSSALR 355 (498)
Q Consensus 291 ~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p-~~~~~~~~l~ 355 (498)
.|++..+++++|.++...|+ +.+|..+|++++.+.| ++......+.
T Consensus 143 ~~~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~~~~~~~~~ 189 (225)
T 2vq2_A 143 QPQFPPAFKELARTKMLAGQ-------------------LGDADYYFKKYQSRVEVLQADDLLLGW 189 (225)
T ss_dssp STTCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999998 8999999999999999 7775444333
No 29
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.80 E-value=1e-17 Score=155.25 Aligned_cols=188 Identities=16% Similarity=0.079 Sum_probs=169.9
Q ss_pred hhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-cCcCCCCCCC
Q 010864 113 AEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES-ADNVSLDSTS 181 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-g~~~~~~~~~ 181 (498)
.+++++|+..+.+++... +..+...|++++|+.+|++++..+|++..+++.+|.++... |+
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-------- 92 (225)
T 2vq2_A 21 GQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR-------- 92 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCC--------
T ss_pred HhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCc--------
Confidence 466777777777766554 23467789999999999999999999999999999999999 99
Q ss_pred CchhhhHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010864 182 PSKDALLEEACKKYDEATR--LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 259 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~--l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~ 259 (498)
+++|+..|+++++ .+|.+..+++++|.++.. .|++++|+ ..|+++++.+|++..++.++|.
T Consensus 93 ------~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~ 155 (225)
T 2vq2_A 93 ------PAESMAYFDKALADPTYPTPYIANLNKGICSAK----QGQFGLAE-------AYLKRSLAAQPQFPPAFKELAR 155 (225)
T ss_dssp ------HHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCchHHHHHHH
Confidence 9999999999999 677778999999999999 99999999 6888999999999999999999
Q ss_pred HHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHH
Q 010864 260 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQF-DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 338 (498)
Q Consensus 260 ~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P-~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 338 (498)
++...|++ ++|+..|++++++.| ++..++..++.++...|+ +..+..+++
T Consensus 156 ~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~a~~~~~ 206 (225)
T 2vq2_A 156 TKMLAGQL----------GDADYYFKKYQSRVEVLQADDLLLGWKIAKALGN-------------------AQAAYEYEA 206 (225)
T ss_dssp HHHHHTCH----------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHH
T ss_pred HHHHcCCH----------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCc-------------------HHHHHHHHH
Confidence 99999999 999999999999999 999999999999999998 788999999
Q ss_pred HHHhcCCCHHHHHHHH
Q 010864 339 AAHALKPSYSVYSSAL 354 (498)
Q Consensus 339 ~Al~l~p~~~~~~~~l 354 (498)
.+..++|++..+...+
T Consensus 207 ~~~~~~p~~~~~~~~l 222 (225)
T 2vq2_A 207 QLQANFPYSEELQTVL 222 (225)
T ss_dssp HHHHHCTTCHHHHHHH
T ss_pred HHHHhCCCCHHHHHHh
Confidence 9999999998765543
No 30
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.80 E-value=8e-18 Score=159.87 Aligned_cols=169 Identities=18% Similarity=0.122 Sum_probs=159.1
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++.+|.+|...|+ +++|+..|+++++++|++..+++++|
T Consensus 47 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~la 112 (252)
T 2ho1_A 47 YLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEME--------------PKLADEEYRKALASDSRNARVLNNYG 112 (252)
T ss_dssp HHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCcCcHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 291 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~ 291 (498)
.++.. .|++++|+ ..|++++. .+|.+..+++++|.++...|++ ++|+.+|++++++.
T Consensus 113 ~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~~~~~ 171 (252)
T 2ho1_A 113 GFLYE----QKRYEEAY-------QRLLEASQDTLYPERSRVFENLGLVSLQMKKP----------AQAKEYFEKSLRLN 171 (252)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHC
T ss_pred HHHHH----HhHHHHHH-------HHHHHHHhCccCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhcC
Confidence 99999 99999999 68888888 8899999999999999999999 99999999999999
Q ss_pred CCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 292 FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 292 P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
|++..+++.+|.++..+|+ +.+|..+|+++++..|++......+..
T Consensus 172 ~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~~~~~~~~~~~~~~~~~~ 217 (252)
T 2ho1_A 172 RNQPSVALEMADLLYKERE-------------------YVPARQYYDLFAQGGGQNARSLLLGIR 217 (252)
T ss_dssp SCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHTTSCCCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcCcHHHHHHHHH
Confidence 9999999999999999999 999999999999999998855444433
No 31
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.80 E-value=2.4e-17 Score=161.86 Aligned_cols=194 Identities=14% Similarity=0.128 Sum_probs=171.1
Q ss_pred hhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcC-------
Q 010864 113 AEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNV------- 175 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~------- 175 (498)
.+++++|...+.+++... +..+...|++++|+..|+++++++|++..++..+|.+|...|+..
T Consensus 34 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 113 (327)
T 3cv0_A 34 LANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLR 113 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 356677777776665544 334667899999999999999999999999999999999888741
Q ss_pred -----CCC----------------------CC-CCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHH
Q 010864 176 -----SLD----------------------ST-SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTK 227 (498)
Q Consensus 176 -----~~~----------------------~~-~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~ 227 (498)
.+. +. .+...+++++|+..|+++++.+|++..+++.+|.++.. .|+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~ 189 (327)
T 3cv0_A 114 AWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNL----SNNYD 189 (327)
T ss_dssp HHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHH
T ss_pred HHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----hccHH
Confidence 111 22 36677899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 010864 228 EAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG 307 (498)
Q Consensus 228 eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~ 307 (498)
+|+ ..|+++++.+|++..+++++|.++...|++ ++|+.+|++++++.|++..+++++|.+|..
T Consensus 190 ~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 190 SAA-------ANLRRAVELRPDDAQLWNKLGATLANGNRP----------QEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 999 688899999999999999999999999999 999999999999999999999999999999
Q ss_pred cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 308 LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
+|+ +.+|..+|++++.+.|+
T Consensus 253 ~g~-------------------~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 253 MSQ-------------------YDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp TTC-------------------HHHHHHHHHHHHHHHTT
T ss_pred hcc-------------------HHHHHHHHHHHHHhCCc
Confidence 999 99999999999999999
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.80 E-value=6.2e-18 Score=153.35 Aligned_cols=149 Identities=19% Similarity=0.227 Sum_probs=141.1
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 235 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 235 (498)
+++.+|+++|.+|..+|+ +++|+..|+++++++|++..+++++|.+|.. +|++++|+
T Consensus 3 e~~~iy~~lG~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~a~----- 59 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGD--------------FDGAIRAYKKVLKADPNNVETLLKLGKTYMD----IGLPNDAI----- 59 (184)
T ss_dssp -CHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred cHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----CCCHHHHH-----
Confidence 578899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhc
Q 010864 236 ATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRT 315 (498)
Q Consensus 236 Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~ 315 (498)
..+.+++..+|++..++.++|.++...+++ +.|+..++++++++|++..+++.+|.+|..+|+
T Consensus 60 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~----- 122 (184)
T 3vtx_A 60 --ESLKKFVVLDTTSAEAYYILGSANFMIDEK----------QAAIDALQRAIALNTVYADAYYKLGLVYDSMGE----- 122 (184)
T ss_dssp --HHHHHHHHHCCCCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----
T ss_pred --HHHHHHHhcCchhHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCccchHHHHHHHHHHHHhCC-----
Confidence 699999999999999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 316 GGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 316 ~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
+.+|+.+|+++++++|++......++.+.
T Consensus 123 --------------~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 123 --------------HDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp --------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred --------------chhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 99999999999999999997666665554
No 33
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.79 E-value=7.6e-18 Score=177.76 Aligned_cols=200 Identities=15% Similarity=0.119 Sum_probs=178.1
Q ss_pred hhhcHHHHHHHHHHhhhcc---------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSP 182 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~---------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~ 182 (498)
..+++++|...+.+++... +..+...|++++|+..|++++..+|+++.+++.+|.+|...|+
T Consensus 255 ~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------- 325 (537)
T 3fp2_A 255 LKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQD--------- 325 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---------
T ss_pred hcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCC---------
Confidence 4467788888888877665 2345567999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010864 183 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262 (498)
Q Consensus 183 ~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~ 262 (498)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++.+|++..+++++|.++.
T Consensus 326 -----~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (537)
T 3fp2_A 326 -----YKNAKEDFQKAQSLNPENVYPYIQLACLLYK----QGKFTESE-------AFFNETKLKFPTLPEVPTFFAEILT 389 (537)
T ss_dssp -----HHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 6889999999999999999999999
Q ss_pred HhcCcchH------------------------------Hhhh----------hhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 263 ELSAIVPA------------------------------REKQ----------TIVRTAISKFRAAIQLQFDFHRAIYNLG 302 (498)
Q Consensus 263 ~~g~~~~a------------------------------~~~~----------~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg 302 (498)
..|++++| +... |++++|+.+|+++++++|++..+++++|
T Consensus 390 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 469 (537)
T 3fp2_A 390 DRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLA 469 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 99999887 1122 9999999999999999999999999999
Q ss_pred HHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010864 303 TVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 355 (498)
Q Consensus 303 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~ 355 (498)
.+|..+|+ +.+|..+|+++++++|++........
T Consensus 470 ~~~~~~g~-------------------~~~A~~~~~~al~~~~~~~~~~~~~~ 503 (537)
T 3fp2_A 470 QLKLQMEK-------------------IDEAIELFEDSAILARTMDEKLQATT 503 (537)
T ss_dssp HHHHHTTC-------------------HHHHHHHHHHHHHHC--CHHHHHHHH
T ss_pred HHHHHhcc-------------------HHHHHHHHHHHHHhCCCcHHHHHHHh
Confidence 99999999 99999999999999999885554443
No 34
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.79 E-value=3.1e-18 Score=161.16 Aligned_cols=170 Identities=23% Similarity=0.227 Sum_probs=152.9
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|+..|+++++++|++..+++++|
T Consensus 33 ~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la 98 (243)
T 2q7f_A 33 GSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNE--------------LERALAFYDKALELDSSAATAYYGAG 98 (243)
T ss_dssp ---------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.++.. .|++++|+ ..|+++++.+|++..++.++|.++...|++ ++|+..|++++++.|+
T Consensus 99 ~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 99 NVYVV----KEMYKEAK-------DMFEKALRAGMENGDLFYMLGTVLVKLEQP----------KLALPYLQRAVELNEN 157 (243)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHTCCSHHHHHHHHHHHHHTSCH----------HHHHHHHHHHHHHCTT
T ss_pred HHHHH----hccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCCc
Confidence 99999 99999999 689999999999999999999999999999 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 294 FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 294 ~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+..+++++|.++...|+ +.+|..+|.+++.+.|++......+..+
T Consensus 158 ~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 158 DTEARFQFGMCLANEGM-------------------LDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp CHHHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 99999999999999998 8999999999999999988655444443
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.79 E-value=1.3e-17 Score=165.60 Aligned_cols=186 Identities=17% Similarity=0.105 Sum_probs=170.8
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~ 181 (498)
..+++++|+..+.+++... +..+...|++++|+..|+++++++|++..+++.+|.++...|+
T Consensus 15 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------- 86 (359)
T 3ieg_A 15 AAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGK-------- 86 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------
T ss_pred HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCC--------
Confidence 3477888888888877665 3456778999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc
Q 010864 182 PSKDALLEEACKKYDEATRLCP---TLHDAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL 246 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p---~~~~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l 246 (498)
+++|+..|+++++++| ++..++..+ |.++.. .|++++|+ ..|+++++.
T Consensus 87 ------~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~ 149 (359)
T 3ieg_A 87 ------LDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFD----GADYTAAI-------TFLDKILEV 149 (359)
T ss_dssp ------HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHH
T ss_pred ------hHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHh
Confidence 9999999999999999 888898888 577777 99999999 689999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCh
Q 010864 247 NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSP 326 (498)
Q Consensus 247 ~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~ 326 (498)
+|++..++.++|.++...|++ ++|+..|++++++.|+++.+++++|.++...|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---------------- 203 (359)
T 3ieg_A 150 CVWDAELRELRAECFIKEGEP----------RKAISDLKAASKLKSDNTEAFYKISTLYYQLGD---------------- 203 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTC----------------
T ss_pred CCCchHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------------
Confidence 999999999999999999999 999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCHHHHH
Q 010864 327 NELYSQSAIYIAAAHALKPSYSVYS 351 (498)
Q Consensus 327 ~~~~~~A~~~~~~Al~l~p~~~~~~ 351 (498)
+.+|..+|++++++.|++....
T Consensus 204 ---~~~A~~~~~~a~~~~~~~~~~~ 225 (359)
T 3ieg_A 204 ---HELSLSEVRECLKLDQDHKRCF 225 (359)
T ss_dssp ---HHHHHHHHHHHHHHCTTCHHHH
T ss_pred ---HHHHHHHHHHHHhhCccchHHH
Confidence 9999999999999999988543
No 36
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.79 E-value=1.3e-19 Score=160.48 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=122.4
Q ss_pred HHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 010864 163 NWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK 242 (498)
Q Consensus 163 ~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~ 242 (498)
.||.++...|+ +++|+..|++++..+|+++.+++++|.+|.. +|++++|+ .+|++
T Consensus 2 ~LG~~~~~~~~--------------~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~----~~~~~~A~-------~~~~~ 56 (150)
T 4ga2_A 2 PLGSMRRSKAD--------------VERYIASVQGSTPSPRQKSIKGFYFAKLYYE----AKEYDLAK-------KYICT 56 (150)
T ss_dssp -----CCCHHH--------------HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHH----TTCHHHHH-------HHHHH
T ss_pred HhHHHHHHcCh--------------HHHHHHHHHHhcccCcccHHHHHHHHHHHHH----cCCHHHHH-------HHHHH
Confidence 35666666666 9999999999999999999999999999999 99999999 69999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCC
Q 010864 243 AVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPR 322 (498)
Q Consensus 243 Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~ 322 (498)
+++++|+++.+|+++|.+|..+|++ ++|+.+|+++++++|+++.+++++|.+|..+|+
T Consensus 57 al~~~p~~~~a~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~------------ 114 (150)
T 4ga2_A 57 YINVQERDPKAHRFLGLLYELEENT----------DKAVECYRRSVELNPTQKDLVLKIAELLCKNDV------------ 114 (150)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCS------------
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCch----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------------
Confidence 9999999999999999999999999 999999999999999999999999999999998
Q ss_pred CCChhHHHHHHHHH-HHHHHhcCCCHHHHHHHH
Q 010864 323 EVSPNELYSQSAIY-IAAAHALKPSYSVYSSAL 354 (498)
Q Consensus 323 ~~~~~~~~~~A~~~-~~~Al~l~p~~~~~~~~l 354 (498)
+.+++.+ ++++++++|+++......
T Consensus 115 -------~~~aa~~~~~~al~l~P~~~~~~~l~ 140 (150)
T 4ga2_A 115 -------TDGRAKYWVERAAKLFPGSPAVYKLK 140 (150)
T ss_dssp -------SSSHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 6666654 599999999999654443
No 37
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.79 E-value=2.8e-17 Score=161.33 Aligned_cols=177 Identities=17% Similarity=0.125 Sum_probs=164.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++.+|.++...|+ +++|+..|+++++++|++..+++++|
T Consensus 31 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~la 96 (327)
T 3cv0_A 31 MLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEK--------------DGLAIIALNHARMLDPKDIAVHAALA 96 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCcCCHHHHHHHH
Confidence 4668999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH------------------------------------------HHHHHHHHHhcCCCCH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQ------------------------------------------ATKNYEKAVQLNWNSP 251 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~------------------------------------------Al~~~~~Al~l~P~~~ 251 (498)
.++.. .|++++|+..|++ |+..|+++++.+|++.
T Consensus 97 ~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 172 (327)
T 3cv0_A 97 VSHTN----EHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDA 172 (327)
T ss_dssp HHHHH----TTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHH----cCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCH
Confidence 99999 9999999876644 5566899999999999
Q ss_pred HHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHH
Q 010864 252 QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYS 331 (498)
Q Consensus 252 ~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 331 (498)
.+++++|.++...|++ ++|+.+|+++++++|++..+++++|.++...|+ +.
T Consensus 173 ~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~~ 223 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNY----------DSAAANLRRAVELRPDDAQLWNKLGATLANGNR-------------------PQ 223 (327)
T ss_dssp HHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HH
T ss_pred HHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-------------------HH
Confidence 9999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 332 QSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 332 ~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+|..+|++++++.|++......+..+
T Consensus 224 ~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 224 EALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99999999999999988655555444
No 38
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.79 E-value=1.4e-18 Score=170.93 Aligned_cols=178 Identities=9% Similarity=0.060 Sum_probs=151.2
Q ss_pred hcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhcCcCCCCCCCCchhhh
Q 010864 114 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPE------DYDALYNWALVLQESADNVSLDSTSPSKDAL 187 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~ 187 (498)
+++++|...+.+++.. +..+|++++|+.+|.+++++.+. .+.+|.++|.+|..+|+
T Consensus 31 ~~~~~A~~~~~~a~~~----~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~-------------- 92 (292)
T 1qqe_A 31 YKFEEAADLCVQAATI----YRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGN-------------- 92 (292)
T ss_dssp HHHHHHHHHHHHHHHH----HHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred ccHHHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCC--------------
Confidence 4589999999998776 77899999999999999998532 26789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHhcCCCC------HHHH
Q 010864 188 LEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMR-GRTKEAEELWKQATKNYEKAVQLNWNS------PQAL 254 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~-g~~~eA~~~~~~Al~~~~~Al~l~P~~------~~a~ 254 (498)
+++|+.+|++|+++.+.. +.++.++|.+|.. . |++++|+. +|++|+++.|.+ ..++
T Consensus 93 ~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~----~lg~~~~A~~-------~~~~Al~~~~~~~~~~~~~~~~ 161 (292)
T 1qqe_A 93 SVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN----DLHDYAKAID-------CYELAGEWYAQDQSVALSNKCF 161 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCCHHHHHH-------HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----hhcCHHHHHH-------HHHHHHHHHHhCCChHHHHHHH
Confidence 999999999999997753 5689999999999 8 99999995 555555555433 5789
Q ss_pred HHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH-------HHHHHHHHHHHcchhHHhccCCCCCCCCChh
Q 010864 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR-------AIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 327 (498)
Q Consensus 255 ~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~-------a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~ 327 (498)
+++|.+|..+|++ ++|+.+|++++++.|++.. +++++|.++..+|+
T Consensus 162 ~~lg~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~----------------- 214 (292)
T 1qqe_A 162 IKCADLKALDGQY----------IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATD----------------- 214 (292)
T ss_dssp HHHHHHHHHTTCH----------HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHhCCH----------HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCC-----------------
Confidence 9999999999999 9999999999999988653 68999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCHHH
Q 010864 328 ELYSQSAIYIAAAHALKPSYSV 349 (498)
Q Consensus 328 ~~~~~A~~~~~~Al~l~p~~~~ 349 (498)
+..|..+|+++++++|++..
T Consensus 215 --~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 215 --AVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp --HHHHHHHHHGGGCC------
T ss_pred --HHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999998764
No 39
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.79 E-value=1.4e-17 Score=171.99 Aligned_cols=193 Identities=14% Similarity=0.115 Sum_probs=174.2
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~ 181 (498)
..+++++|+..+.+++... +..+...|++++|+..|+++++.+|+++.+|+.+|.+|...|+
T Consensus 155 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------- 226 (450)
T 2y4t_A 155 GSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGD-------- 226 (450)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTC--------
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------
Confidence 4577888888888877654 3456778999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN 249 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~ 249 (498)
+++|+..|++++.++|++..++..+ |.++.. .|++++|+ ..|+++++++|+
T Consensus 227 ------~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~-------~~~~~~l~~~p~ 289 (450)
T 2y4t_A 227 ------HELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR----DGRYTDAT-------SKYESVMKTEPS 289 (450)
T ss_dssp ------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHCCS
T ss_pred ------HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcCCc
Confidence 9999999999999999999988777 888988 99999999 688999999999
Q ss_pred CH----HHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCC
Q 010864 250 SP----QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVS 325 (498)
Q Consensus 250 ~~----~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~ 325 (498)
++ .++.++|.++.+.|++ ++|+..|+++++++|+++.+++++|.+|...|+
T Consensus 290 ~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~--------------- 344 (450)
T 2y4t_A 290 IAEYTVRSKERICHCFSKDEKP----------VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEM--------------- 344 (450)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---------------
T ss_pred chHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC---------------
Confidence 84 4899999999999999 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 326 PNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 326 ~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
+.+|..+|+++++++|++......+..+.
T Consensus 345 ----~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 373 (450)
T 2y4t_A 345 ----YDEAIQDYETAQEHNENDQQIREGLEKAQ 373 (450)
T ss_dssp ----HHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 99999999999999999997766666543
No 40
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.78 E-value=1.9e-17 Score=177.36 Aligned_cols=188 Identities=12% Similarity=0.070 Sum_probs=140.5
Q ss_pred hcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCc
Q 010864 114 EQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 183 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~ 183 (498)
+++++|...+.++.... ..++.+.|++++|+..|+++++.+|++..+|+.+|.+|...|+
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---------- 456 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGN---------- 456 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTC----------
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC----------
Confidence 45555555555544322 2234445566666666666666666556666666666666665
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc------CCCC-HHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL------NWNS-PQALNN 256 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l------~P~~-~~a~~~ 256 (498)
+++|++.|+++++++|++..+|+++|.+|.. .|++++|+ ..|+++++. +|++ ..+|++
T Consensus 457 ----~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~p~~~~~~~~~ 521 (597)
T 2xpi_A 457 ----ILLANEYLQSSYALFQYDPLLLNELGVVAFN----KSDMQTAI-------NHFQNALLLVKKTQSNEKPWAATWAN 521 (597)
T ss_dssp ----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHHHHSCCCSGGGHHHHHH
T ss_pred ----HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHH-------HHHHHHHHhhhccccchhhHHHHHHH
Confidence 7777777777777777776777777777766 77777766 566666666 6765 899999
Q ss_pred HHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHH
Q 010864 257 WGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIY 336 (498)
Q Consensus 257 lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~ 336 (498)
+|.+|...|++ ++|+..|+++++++|+++.+++.+|.+|...|+ +.+|..+
T Consensus 522 l~~~~~~~g~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~-------------------~~~A~~~ 572 (597)
T 2xpi_A 522 LGHAYRKLKMY----------DAAIDALNQGLLLSTNDANVHTAIALVYLHKKI-------------------PGLAITH 572 (597)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC-------------------HHHHHHH
T ss_pred HHHHHHHhcCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-------------------HHHHHHH
Confidence 99999999999 999999999999999999999999999999999 9999999
Q ss_pred HHHHHhcCCCHHHHHHHHH
Q 010864 337 IAAAHALKPSYSVYSSALR 355 (498)
Q Consensus 337 ~~~Al~l~p~~~~~~~~l~ 355 (498)
|+++++++|++......+.
T Consensus 573 ~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 573 LHESLAISPNEIMASDLLK 591 (597)
T ss_dssp HHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHH
Confidence 9999999999986655544
No 41
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.78 E-value=6.2e-18 Score=162.71 Aligned_cols=187 Identities=13% Similarity=0.078 Sum_probs=154.9
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC---HH
Q 010864 134 RSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---HD 207 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~---~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---~~ 207 (498)
+...|++++|+..|++++..+|++ +.+++.+|.+|+.+|+ +++|+..|+++++++|++ ..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKE--------------YLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCTTHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHHHCCCCchhHH
Confidence 467899999999999999999999 9999999999999999 999999999999998854 67
Q ss_pred HHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHhcC
Q 010864 208 AFYNWAIAISDR----AKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL-----------------NNWGLALQELSA 266 (498)
Q Consensus 208 a~~~lg~~~~~~----~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~-----------------~~lg~~l~~~g~ 266 (498)
+++++|.++... ++.+|++++|+ ..|+++++.+|++..+. +++|.+|..+|+
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~-------~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~ 163 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAI-------EAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERREL 163 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHH-------HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcccccccchhHHHHH-------HHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 899999998651 00035555555 79999999999986666 889999999999
Q ss_pred cchHHhhhhhHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhc
Q 010864 267 IVPAREKQTIVRTAISKFRAAIQLQFD---FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 343 (498)
Q Consensus 267 ~~~a~~~~~~~~~Ai~~~~~Al~l~P~---~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 343 (498)
+ ++|+..|+++++..|+ ...+++++|.+|..+|..... ......+.+|..+|+++++.
T Consensus 164 ~----------~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~---------~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 164 Y----------EAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR---------ARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp H----------HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCG---------GGHHHHHHHHHHHHHHHHHH
T ss_pred H----------HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchh---------hcccchHHHHHHHHHHHHHH
Confidence 9 9999999999999998 568999999999998541000 00123389999999999999
Q ss_pred CCCHHHHHHHHHHHHcc
Q 010864 344 KPSYSVYSSALRLVRSM 360 (498)
Q Consensus 344 ~p~~~~~~~~l~~~~~~ 360 (498)
.|++..+..+...+..+
T Consensus 225 ~p~~~~~~~a~~~l~~~ 241 (261)
T 3qky_A 225 FPDSPLLRTAEELYTRA 241 (261)
T ss_dssp CTTCTHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHH
Confidence 99998766666655443
No 42
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.78 E-value=4.6e-18 Score=163.29 Aligned_cols=169 Identities=15% Similarity=0.087 Sum_probs=149.2
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC----HHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL----HDA 208 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~----~~a 208 (498)
.+...|++++|+..|+++++.+|+++.+++.+|.+|...|+ +++|+..|+++++ .|.+ ..+
T Consensus 12 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~-~~~~~~~~~~~ 76 (272)
T 3u4t_A 12 FLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAK--------------YDLAQKDIETYFS-KVNATKAKSAD 76 (272)
T ss_dssp HHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTC--------------HHHHHHHHHHHHT-TSCTTTCCHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh--------------HHHHHHHHHHHHh-ccCchhHHHHH
Confidence 35678999999999999999999999999999999999999 9999999999999 4433 556
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHH
Q 010864 209 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAI 288 (498)
Q Consensus 209 ~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al 288 (498)
++++|.++.. +|++++|+ ..|+++++++|++..++.++|.+|..+|++ ++|+.+|++++
T Consensus 77 ~~~lg~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al 135 (272)
T 3u4t_A 77 FEYYGKILMK----KGQDSLAI-------QQYQAAVDRDTTRLDMYGQIGSYFYNKGNF----------PLAIQYMEKQI 135 (272)
T ss_dssp HHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHHHHHHGGGC
T ss_pred HHHHHHHHHH----cccHHHHH-------HHHHHHHhcCcccHHHHHHHHHHHHHccCH----------HHHHHHHHHHh
Confidence 9999999999 99999999 689999999999999999999999999999 99999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 289 QLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 289 ~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+++|++..+++++|..++..++ +.+|..+|+++++++|++......+..
T Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~a~~~~p~~~~~~~~~~~ 184 (272)
T 3u4t_A 136 RPTTTDPKVFYELGQAYYYNKE-------------------YVKADSSFVKVLELKPNIYIGYLWRAR 184 (272)
T ss_dssp CSSCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 9999999999999944444445 899999999999999998744443333
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.78 E-value=2.5e-17 Score=170.04 Aligned_cols=187 Identities=17% Similarity=0.119 Sum_probs=169.3
Q ss_pred hhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCC
Q 010864 113 AEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSP 182 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~ 182 (498)
.+++++|+..|.+++... +..+...|++++|+..|+++++++|++..+++.+|.+|..+|+
T Consensus 39 ~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~--------- 109 (450)
T 2y4t_A 39 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK--------- 109 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---------
T ss_pred CCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC---------
Confidence 467888888888777654 3456788999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCH---HHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC
Q 010864 183 SKDALLEEACKKYDEATRLCPTLH---DAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 247 (498)
Q Consensus 183 ~~~~~~~~A~~~~~~Al~l~p~~~---~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~ 247 (498)
+++|+..|+++++++|++. .++..+ |.++.. .|++++|+ ..|+++++.+
T Consensus 110 -----~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~~ 173 (450)
T 2y4t_A 110 -----LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFG----SGDYTAAI-------AFLDKILEVC 173 (450)
T ss_dssp -----HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHC
T ss_pred -----HHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhC
Confidence 9999999999999999988 777666 555777 88888888 6889999999
Q ss_pred CCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChh
Q 010864 248 WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 327 (498)
Q Consensus 248 P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~ 327 (498)
|++..+++++|.+|...|++ ++|+..|+++++++|++..+++++|.+|...|+
T Consensus 174 ~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------------- 226 (450)
T 2y4t_A 174 VWDAELRELRAECFIKEGEP----------RKAISDLKAASKLKNDNTEAFYKISTLYYQLGD----------------- 226 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCG----------GGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTC-----------------
T ss_pred CCChHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-----------------
Confidence 99999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010864 328 ELYSQSAIYIAAAHALKPSYSVYSSA 353 (498)
Q Consensus 328 ~~~~~A~~~~~~Al~l~p~~~~~~~~ 353 (498)
+.+|..+|++++.++|++......
T Consensus 227 --~~~A~~~~~~~~~~~p~~~~~~~~ 250 (450)
T 2y4t_A 227 --HELSLSEVRECLKLDQDHKRCFAH 250 (450)
T ss_dssp --HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred --HHHHHHHHHHHHHhCCChHHHHHH
Confidence 999999999999999998855443
No 44
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.78 E-value=2.3e-17 Score=162.56 Aligned_cols=183 Identities=10% Similarity=0.013 Sum_probs=143.5
Q ss_pred hcHHHHHHHHHHhhhcc------------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCC
Q 010864 114 EQNNAAMELINSVTGVD------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~------------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~ 181 (498)
++.++|+..+.+++... +..+...|++++|+..|++ |++.+++..+|.+|..+|+
T Consensus 79 ~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~-------- 145 (291)
T 3mkr_A 79 SRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDR-------- 145 (291)
T ss_dssp TTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTC--------
T ss_pred CcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCC--------
Confidence 45566666666654321 2345567888888888777 7778888888888888888
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 261 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l 261 (498)
+++|++.|+++++++|++... +++.++...+...|++++|+ ..|+++++.+|+++.+++++|.++
T Consensus 146 ------~~~A~~~l~~~~~~~p~~~~~--~l~~a~~~l~~~~~~~~eA~-------~~~~~~l~~~p~~~~~~~~la~~~ 210 (291)
T 3mkr_A 146 ------LDLARKELKKMQDQDEDATLT--QLATAWVSLAAGGEKLQDAY-------YIFQEMADKCSPTLLLLNGQAACH 210 (291)
T ss_dssp ------HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHCTTHHHHHH-------HHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhhCcCcHHH--HHHHHHHHHHhCchHHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 888888888888888887533 33333332111146777777 799999999999999999999999
Q ss_pred HHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHH-HHHHHHHH
Q 010864 262 QELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQ-SAIYIAAA 340 (498)
Q Consensus 262 ~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~A 340 (498)
..+|++ ++|+..|+++++++|+++.+++|+|.++..+|+ +.+ +..+++++
T Consensus 211 ~~~g~~----------~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~-------------------~~eaa~~~~~~~ 261 (291)
T 3mkr_A 211 MAQGRW----------EAAEGVLQEALDKDSGHPETLINLVVLSQHLGK-------------------PPEVTNRYLSQL 261 (291)
T ss_dssp HHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------CHHHHHHHHHHH
T ss_pred HHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------------CHHHHHHHHHHH
Confidence 999999 999999999999999999999999999999998 444 67899999
Q ss_pred HhcCCCHHHHHHH
Q 010864 341 HALKPSYSVYSSA 353 (498)
Q Consensus 341 l~l~p~~~~~~~~ 353 (498)
++++|+++.....
T Consensus 262 ~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 262 KDAHRSHPFIKEY 274 (291)
T ss_dssp HHHCTTCHHHHHH
T ss_pred HHhCCCChHHHHH
Confidence 9999999955543
No 45
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.78 E-value=3e-18 Score=180.54 Aligned_cols=167 Identities=14% Similarity=0.100 Sum_probs=152.0
Q ss_pred hhhcH-HHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---------
Q 010864 112 LAEQN-NAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES--------- 171 (498)
Q Consensus 112 ~~~~~-~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~--------- 171 (498)
..+++ ++|+..+.+++..+ +..+..+|++++|+.+|+++++++|+ ..+++++|.+|..+
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~ 192 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHS 192 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHH
T ss_pred hccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhh
Confidence 34778 99999999988776 34577889999999999999999999 79999999999998
Q ss_pred cCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHhcC
Q 010864 172 ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR----GRTKEAEELWKQATKNYEKAVQLN 247 (498)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~----g~~~eA~~~~~~Al~~~~~Al~l~ 247 (498)
|+ +++|+..|+++++++|++..+|+++|.+|..+++.. |++++|+ ..|+++++++
T Consensus 193 g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~-------~~~~~al~~~ 251 (474)
T 4abn_A 193 RH--------------VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQAL-------SAYAQAEKVD 251 (474)
T ss_dssp HH--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH-------HHHHHHHHHC
T ss_pred hh--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHH-------HHHHHHHHhC
Confidence 77 999999999999999999999999999999922222 5566666 7999999999
Q ss_pred C---CCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 248 W---NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 248 P---~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
| +++.+|+++|.+|..+|++ ++|+.+|+++++++|++..++.+++.++..+|+
T Consensus 252 p~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 252 RKASSNPDLHLNRATLHKYEESY----------GEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp GGGGGCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999 999999999999999999999999999999998
No 46
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.77 E-value=7.9e-17 Score=154.44 Aligned_cols=191 Identities=16% Similarity=0.158 Sum_probs=156.2
Q ss_pred hhcHHHHHHHHHHhhhcc--------------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCC
Q 010864 113 AEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 178 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~--------------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~ 178 (498)
.+++++|+..+.+++... +..+...|++++|+.+|++++.++|+++.+++.+|.+|...|+
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~----- 92 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN----- 92 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC-----
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC-----
Confidence 366677777777666541 3346678999999999999999999999999999999999999
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010864 179 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 258 (498)
Q Consensus 179 ~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg 258 (498)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++++|++......++
T Consensus 93 ---------~~~A~~~~~~al~~~~~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~a~~~~~~~~~~~~~~~ 152 (275)
T 1xnf_A 93 ---------FDAAYEAFDSVLELDPTYNYAHLNRGIALYY----GGRDKLAQ-------DDLLAFYQDDPNDPFRSLWLY 152 (275)
T ss_dssp ---------HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhcCccccHHHHHHHHHHHH----hccHHHHH-------HHHHHHHHhCCCChHHHHHHH
Confidence 9999999999999999999999999999999 99999999 688888889999987776666
Q ss_pred HHHHHhcCcchHH-----------------------hhhhhHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHcchh
Q 010864 259 LALQELSAIVPAR-----------------------EKQTIVRTAISKFRAAIQLQFD----FHRAIYNLGTVLYGLAED 311 (498)
Q Consensus 259 ~~l~~~g~~~~a~-----------------------~~~~~~~~Ai~~~~~Al~l~P~----~~~a~~~Lg~~~~~~g~~ 311 (498)
.+ ...|++++|. ...++.++|+..++++++..|. +..+++++|.+|..+|+
T Consensus 153 ~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~- 230 (275)
T 1xnf_A 153 LA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGD- 230 (275)
T ss_dssp HH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCC-
Confidence 54 5568884441 1123345566666666655543 36888999999999998
Q ss_pred HHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 312 TLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
+.+|..+|++++.++|++.
T Consensus 231 ------------------~~~A~~~~~~al~~~p~~~ 249 (275)
T 1xnf_A 231 ------------------LDSATALFKLAVANNVHNF 249 (275)
T ss_dssp ------------------HHHHHHHHHHHHTTCCTTC
T ss_pred ------------------HHHHHHHHHHHHhCCchhH
Confidence 8999999999999999765
No 47
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.77 E-value=2e-18 Score=189.96 Aligned_cols=163 Identities=14% Similarity=0.043 Sum_probs=149.0
Q ss_pred hhhcHHHHHHHHHHhh--------hcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Q 010864 112 LAEQNNAAMELINSVT--------GVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESAD 173 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~--------~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~ 173 (498)
..+++++|+..+.+++ ... +..+..+|++++|+..|+++++++|+++.+|+++|.+|..+|+
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 482 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGD 482 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCC
Confidence 3477889999998887 333 3456788999999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Q 010864 174 NVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQA 253 (498)
Q Consensus 174 ~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a 253 (498)
+++|+..|+++++++|++..+++++|.++.. +|++++ + ..|+++++++|++..+
T Consensus 483 --------------~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~----~g~~~~-~-------~~~~~al~~~P~~~~a 536 (681)
T 2pzi_A 483 --------------YDSATKHFTEVLDTFPGELAPKLALAATAEL----AGNTDE-H-------KFYQTVWSTNDGVISA 536 (681)
T ss_dssp --------------HHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH----HTCCCT-T-------CHHHHHHHHCTTCHHH
T ss_pred --------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCChHH-H-------HHHHHHHHhCCchHHH
Confidence 9999999999999999999999999999999 999999 8 6999999999999999
Q ss_pred HHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 254 LNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 254 ~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
++++|.+|..+|++ ++|+..|+++++++|++..+++++|.+|...+.
T Consensus 537 ~~~lg~~~~~~g~~----------~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 537 AFGLARARSAEGDR----------VGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HHHHHHHHHHTTCH----------HHHHHHHHTSCTTSTTHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHcCCH----------HHHHHHHHhhcccCcccHHHHHHHHHHHHccCC
Confidence 99999999999999 999999999999999999999999999977553
No 48
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.77 E-value=2.6e-17 Score=161.77 Aligned_cols=179 Identities=14% Similarity=0.057 Sum_probs=121.3
Q ss_pred hhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CcCCCCCCC
Q 010864 113 AEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLDSTS 181 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g-~~~~~~~~~ 181 (498)
.+++++|..++.+++... ...+...|++++|+..|+++++.+|+++.+|+.+|.++...| +
T Consensus 35 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 106 (330)
T 3hym_B 35 NCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHK-------- 106 (330)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSC--------
T ss_pred cCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhh--------
Confidence 366666666666665544 223455667777777777777777777777777777777776 6
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 261 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l 261 (498)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++++|++..+++++|.++
T Consensus 107 ------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~~~~ 169 (330)
T 3hym_B 107 ------NEHARRYLSKATTLEKTYGPAWIAYGHSFAV----ESEHDQAM-------AAYFTAAQLMKGCHLPMLYIGLEY 169 (330)
T ss_dssp ------HHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhccccHHHHHHHHHHH
Confidence 6777777777777777776777777777766 67766666 566677777777666677777777
Q ss_pred HHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHH
Q 010864 262 QELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAH 341 (498)
Q Consensus 262 ~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 341 (498)
...|++ ++|+.+|++++++.|+++.+++++|.++...|+ +.+|..+|++++
T Consensus 170 ~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~a~ 220 (330)
T 3hym_B 170 GLTNNS----------KLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE-------------------WKTAEKWFLDAL 220 (330)
T ss_dssp HHTTCH----------HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHH
T ss_pred HHHhhH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc-------------------HHHHHHHHHHHH
Confidence 777766 777777777777777777777777777777766 666676666666
Q ss_pred hcCC
Q 010864 342 ALKP 345 (498)
Q Consensus 342 ~l~p 345 (498)
.+.+
T Consensus 221 ~~~~ 224 (330)
T 3hym_B 221 EKIK 224 (330)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 6543
No 49
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.77 E-value=1.1e-18 Score=155.14 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
+-.+-..|+++++++|++..+++++|.++.. +|++++|+ ..|++++.++|+++.+|+++|.+|..+|++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~----~g~~~eA~-------~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 86 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFYN----KGRIEEAE-------VFFRFLCIYDFYNVDYIMGLAAIYQIKEQF 86 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHccH
Confidence 5555567888999999999999999999999 99999999 699999999999999999999999999999
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|..+|++++++.|+.
T Consensus 87 ----------~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~-------------------~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 87 ----------QQAADLYAVAFALGKNDYTPVFHTGQCQLRLKA-------------------PLKAKECFELVIQHSNDE 137 (151)
T ss_dssp ----------HHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCCCH
T ss_pred ----------HHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHH
Q 010864 348 SVYSSALRLV 357 (498)
Q Consensus 348 ~~~~~~l~~~ 357 (498)
+....+-.++
T Consensus 138 ~~~~~A~~ll 147 (151)
T 3gyz_A 138 KLKIKAQSYL 147 (151)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8555554443
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.77 E-value=2.6e-17 Score=154.75 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=138.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 154 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCP-TLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 154 ~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p-~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
.+.++++++++|.+++..|+ +++|+..|+++++++| .+..+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~-- 62 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNAKN--------------YAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN----IKKYKEAA-- 62 (228)
T ss_dssp -CCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred cccCHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH----hhcHHHHH--
Confidence 35678999999999999999 9999999999999999 899999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH-------HHHHHHHHHH
Q 010864 233 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH-------RAIYNLGTVL 305 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~-------~a~~~Lg~~~ 305 (498)
..|+++++++|++..+++++|.+|..+|++ ++|+..|+++++++|+++ .+++++|.++
T Consensus 63 -----~~~~~al~~~p~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 127 (228)
T 4i17_A 63 -----DYFDIAIKKNYNLANAYIGKSAAYRDMKNN----------QEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKF 127 (228)
T ss_dssp -----HHHHHHHHTTCSHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhCcchHHHHHHHHHHHHHcccH----------HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHH
Confidence 699999999999999999999999999999 999999999999999999 6689999999
Q ss_pred HHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHH
Q 010864 306 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS--YSVYSSALRLV 357 (498)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~--~~~~~~~l~~~ 357 (498)
..+|+ +.+|+.+|.++++++|+ +......+..+
T Consensus 128 ~~~~~-------------------~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 162 (228)
T 4i17_A 128 QQAGN-------------------IEKAEENYKHATDVTSKKWKTDALYSLGVL 162 (228)
T ss_dssp HHTTC-------------------HHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHhcc-------------------HHHHHHHHHHHHhcCCCcccHHHHHHHHHH
Confidence 99998 99999999999999999 77555555443
No 51
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.77 E-value=9e-18 Score=180.45 Aligned_cols=157 Identities=17% Similarity=0.024 Sum_probs=134.3
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 216 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~ 216 (498)
.|++++|+..|+++++.+|++..+|+++|.+|..+|+ +++|+..|+++++++|++..+++++|.+|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 67 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGD--------------TTAGEMAVQRGLALHPGHPEAVARLGRVR 67 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHTTSTTCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH
Q 010864 217 SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 217 ~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~ 296 (498)
.. +|++++|+ ..|+++++++|++..+++++|.+|..+|++ ++|+.+|+++++++|++..
T Consensus 68 ~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~p~~~~ 126 (568)
T 2vsy_A 68 WT----QQRHAEAA-------VLLQQASDAAPEHPGIALWLGHALEDAGQA----------EAAAAAYTRAHQLLPEEPY 126 (568)
T ss_dssp HH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHH
T ss_pred HH----CCCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHH
Confidence 99 99999999 699999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHc---chhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 297 AIYNLGTVLYGL---AEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 297 a~~~Lg~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
+++++|.++..+ |+ +.+|..+|+++++.+|++
T Consensus 127 ~~~~l~~~~~~~~~~g~-------------------~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 127 ITAQLLNWRRRLCDWRA-------------------LDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHHHHHHHTTCCTT-------------------HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhcccc-------------------HHHHHHHHHHHHhcCCcc
Confidence 999999999999 88 899999999999999985
No 52
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.76 E-value=1.6e-18 Score=154.07 Aligned_cols=119 Identities=18% Similarity=0.066 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 010864 142 FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAK 221 (498)
Q Consensus 142 ~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~ 221 (498)
.+-..|+++++++|+++++++++|.+++..|+ +++|+..|++++.++|+++.+|+++|.+|..
T Consensus 20 ~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~--------------~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~--- 82 (151)
T 3gyz_A 20 NSGATLKDINAIPDDMMDDIYSYAYDFYNKGR--------------IEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI--- 82 (151)
T ss_dssp HTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---
T ss_pred HCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---
Confidence 34456888999999999999999999999999 9999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH
Q 010864 222 MRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 295 (498)
Q Consensus 222 ~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~ 295 (498)
+|++++|+ .+|+++++++|+++.+|+++|.+|..+|++ ++|+.+|++++++.|+..
T Consensus 83 -~g~~~~Ai-------~~~~~al~l~P~~~~~~~~lg~~~~~lg~~----------~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 83 -KEQFQQAA-------DLYAVAFALGKNDYTPVFHTGQCQLRLKAP----------LKAKECFELVIQHSNDEK 138 (151)
T ss_dssp -TTCHHHHH-------HHHHHHHHHSSSCCHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCCCHH
T ss_pred -HccHHHHH-------HHHHHHHhhCCCCcHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCHH
Confidence 99999999 799999999999999999999999999999 999999999999999865
No 53
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.75 E-value=1e-17 Score=143.85 Aligned_cols=120 Identities=18% Similarity=0.219 Sum_probs=111.9
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhh
Q 010864 197 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTI 276 (498)
Q Consensus 197 ~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~ 276 (498)
++..++|+.+.++.++|.++.. .|++++|+ ..|+++++++|+++.+|+++|.+|..+|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--------- 63 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFK----KGDYPTAM-------RHYNEAVKRDPENAILYSNRAACLTKLMEF--------- 63 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH---------
T ss_pred HHHHHCHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHhhHHHhhccH---------
Confidence 4556899999999999999999 99999999 699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 277 VRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 277 ~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
++|+..|+++++++|++..+|+++|.+|..+|+ +.+|..+|+++++++|++......+..
T Consensus 64 -~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~-------------------~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 64 -QRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE-------------------WSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp -HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999987776653
No 54
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.75 E-value=1.2e-16 Score=171.19 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=133.3
Q ss_pred hhhcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 181 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~ 181 (498)
..+++++|..++.++.... ..++...|++++|+..|++++..+|++..+++.+|.+|...|+
T Consensus 317 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------- 388 (597)
T 2xpi_A 317 VRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNK-------- 388 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTC--------
T ss_pred HhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhcc--------
Confidence 4456666666666554322 3334455555555555555555555555555555555555555
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH---------------------------
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK--------------------------- 234 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~--------------------------- 234 (498)
+++|+..|+++++++|++..+|+.+|.+|.. .|++++|++.|+
T Consensus 389 ------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 458 (597)
T 2xpi_A 389 ------ISEARRYFSKSSTMDPQFGPAWIGFAHSFAI----EGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNIL 458 (597)
T ss_dssp ------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHH
T ss_pred ------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHH
Confidence 5555555555555555555555555555555 555555553321
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh------cCCC-HHHHHHHHHHHHH
Q 010864 235 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL------QFDF-HRAIYNLGTVLYG 307 (498)
Q Consensus 235 ~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l------~P~~-~~a~~~Lg~~~~~ 307 (498)
+|+..|+++++.+|+++.+++++|.+|.+.|++ ++|+..|++++++ +|++ ..+++++|.+|..
T Consensus 459 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~ 528 (597)
T 2xpi_A 459 LANEYLQSSYALFQYDPLLLNELGVVAFNKSDM----------QTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK 528 (597)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Confidence 133577777777777777777777777777777 9999999999999 6665 8899999999999
Q ss_pred cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 308 LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
.|+ +.+|..+|+++++++|++......+..
T Consensus 529 ~g~-------------------~~~A~~~~~~~~~~~p~~~~~~~~l~~ 558 (597)
T 2xpi_A 529 LKM-------------------YDAAIDALNQGLLLSTNDANVHTAIAL 558 (597)
T ss_dssp TTC-------------------HHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred hcC-------------------HHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 999 999999999999999998855544443
No 55
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.75 E-value=4.9e-17 Score=171.53 Aligned_cols=187 Identities=20% Similarity=0.189 Sum_probs=150.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|+++.+|+++|.+|..+|+ +++|+..|+++++++|++..+++.+|
T Consensus 35 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la 100 (537)
T 3fp2_A 35 FFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGD--------------LEKVIEFTTKALEIKPDHSKALLRRA 100 (537)
T ss_dssp HHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 5779999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHH--------------------------------------------------------------
Q 010864 214 IAISDRAKMRGRTKEAEE-------------------------------------------------------------- 231 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~-------------------------------------------------------------- 231 (498)
.++.. +|++++|+.
T Consensus 101 ~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (537)
T 3fp2_A 101 SANES----LGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDS 176 (537)
T ss_dssp HHHHH----HTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCH
T ss_pred HHHHH----cCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcCh
Confidence 99999 999999975
Q ss_pred ----------------------------------------HHHHHHHHHHHHHhcCCCCHH-------HHHHHHHHHHHh
Q 010864 232 ----------------------------------------LWKQATKNYEKAVQLNWNSPQ-------ALNNWGLALQEL 264 (498)
Q Consensus 232 ----------------------------------------~~~~Al~~~~~Al~l~P~~~~-------a~~~lg~~l~~~ 264 (498)
.|++|+..|+++++.+|++.. +++.+|.++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~ 256 (537)
T 3fp2_A 177 HLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLK 256 (537)
T ss_dssp HHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhc
Confidence 456788899999999999866 467777777777
Q ss_pred cCcchH-----------------------HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCC
Q 010864 265 SAIVPA-----------------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNP 321 (498)
Q Consensus 265 g~~~~a-----------------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~ 321 (498)
|++++| +...|++++|+.+|+++++++|+++.+++++|.++...|+
T Consensus 257 ~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------- 325 (537)
T 3fp2_A 257 NNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQD----------- 325 (537)
T ss_dssp TCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----------
T ss_pred ccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCC-----------
Confidence 787555 1235666777777777777777777777777777777776
Q ss_pred CCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 322 REVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 322 ~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+.+|..+|.+++.++|++......+..+
T Consensus 326 --------~~~A~~~~~~a~~~~~~~~~~~~~la~~ 353 (537)
T 3fp2_A 326 --------YKNAKEDFQKAQSLNPENVYPYIQLACL 353 (537)
T ss_dssp --------HHHHHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 7778888888888877776444444433
No 56
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.74 E-value=8.7e-18 Score=152.20 Aligned_cols=155 Identities=10% Similarity=-0.052 Sum_probs=136.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++.+|+++.+++++|.+|...|+ +++|+..|++++.++| +...+..++
T Consensus 16 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~--------------~~~A~~~~~~a~~~~p-~~~~~~~~~ 80 (176)
T 2r5s_A 16 LLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQ--------------FELAQELLATIPLEYQ-DNSYKSLIA 80 (176)
T ss_dssp HHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTC--------------HHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCC--------------HHHHHHHHHHhhhccC-ChHHHHHHH
Confidence 5668999999999999999999999999999999999999 9999999999999999 887776666
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.+... . .++..+|+ ..|+++++++|+++.+++++|.++...|++ ++|+..|+++++++|+
T Consensus 81 ~~~~~--~-~~~~~~a~-------~~~~~al~~~P~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 81 KLELH--Q-QAAESPEL-------KRLEQELAANPDNFELACELAVQYNQVGRD----------EEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHH--H-HHTSCHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCTT
T ss_pred HHHHH--h-hcccchHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcccH----------HHHHHHHHHHHHhCcc
Confidence 55332 0 22333445 799999999999999999999999999999 9999999999999998
Q ss_pred C--HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 294 F--HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 294 ~--~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
+ ..++.++|.++..+|+ ..+|..+|.+++.
T Consensus 141 ~~~~~a~~~l~~~~~~~g~-------------------~~~A~~~y~~al~ 172 (176)
T 2r5s_A 141 AQDGEVKKTFMDILSALGQ-------------------GNAIASKYRRQLY 172 (176)
T ss_dssp TTTTHHHHHHHHHHHHHCS-------------------SCHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHhCC-------------------CCcHHHHHHHHHH
Confidence 6 6699999999999998 6788888888764
No 57
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.74 E-value=2e-16 Score=164.62 Aligned_cols=201 Identities=12% Similarity=-0.005 Sum_probs=167.1
Q ss_pred hhhhcHHHHHHHHHHhhhcc-------------------hhhHHhhccHHHHHHHHHHHHHhC--------CCCHHHHHH
Q 010864 111 QLAEQNNAAMELINSVTGVD-------------------EEGRSRQRILTFAAKRYANAIERN--------PEDYDALYN 163 (498)
Q Consensus 111 q~~~~~~~A~~~~~~~~~~~-------------------~~~~~~~g~~~~A~~~~~~al~~~--------P~~~~a~~~ 163 (498)
...|++++|+..+.+++.+. +..+..+|++++|+.+|++++++. +..+.++.+
T Consensus 62 ~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~ 141 (472)
T 4g1t_A 62 HLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCE 141 (472)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHH
Confidence 34578888988888876542 234677899999999999999873 467899999
Q ss_pred HHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 010864 164 WALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 243 (498)
Q Consensus 164 lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~A 243 (498)
+|.++...|. ++|++|+.+|+++++++|+++.+++++|.++.. ....+++++|+ ..|+++
T Consensus 142 ~g~~~~~~~~------------~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~-l~~~~~~~~al-------~~~~~a 201 (472)
T 4g1t_A 142 EGWTRLKCGG------------NQNERAKVCFEKALEKKPKNPEFTSGLAIASYR-LDNWPPSQNAI-------DPLRQA 201 (472)
T ss_dssp HHHHHHHHCT------------THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHHSCCCCCTH-------HHHHHH
T ss_pred HHHHHHHHcc------------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcCchHHHHHH-------HHHHHH
Confidence 9999888764 349999999999999999999999999998654 11257777777 689999
Q ss_pred HhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010864 244 VQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 323 (498)
Q Consensus 244 l~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~ 323 (498)
++++|++..++.++|..+..+++. .+++++|+.+|++++.++|++..+++++|.+|...|+
T Consensus 202 l~l~p~~~~~~~~l~~~~~~~~~~------~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~------------- 262 (472)
T 4g1t_A 202 IRLNPDNQYLKVLLALKLHKMREE------GEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDE------------- 262 (472)
T ss_dssp HHHCSSCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC-------------
T ss_pred hhcCCcchHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCc-------------
Confidence 999999999999999988876544 3445899999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 324 VSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 324 ~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+..|..+|.++++++|++......+..
T Consensus 263 ------~~~A~~~~~~al~~~p~~~~~~~~lg~ 289 (472)
T 4g1t_A 263 ------PDKAIELLKKALEYIPNNAYLHCQIGC 289 (472)
T ss_dssp ------HHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 999999999999999999866555544
No 58
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.73 E-value=1.2e-16 Score=150.64 Aligned_cols=168 Identities=15% Similarity=0.067 Sum_probs=143.0
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHH---
Q 010864 134 RSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD--- 207 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~---~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~--- 207 (498)
+...|++++|+..|++++..+|++ ..+++.+|.+|..+|+ +++|+..|+++++++|++..
T Consensus 14 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~~l~~~P~~~~~~~ 79 (225)
T 2yhc_A 14 KLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNAD--------------LPLAQAAIDRFIRLNPTHPNIDY 79 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCTTHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHCcCCCcHHH
Confidence 567899999999999999999987 4799999999999999 99999999999999999764
Q ss_pred HHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHH
Q 010864 208 AFYNWAIAISDRAKMRG-----------RTKEAEELWKQATKNYEKAVQLNWNSPQAL-----------------NNWGL 259 (498)
Q Consensus 208 a~~~lg~~~~~~~~~~g-----------~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~-----------------~~lg~ 259 (498)
+++.+|.++.. +| ....-...+++|+..|+++++.+|++..++ ..+|.
T Consensus 80 a~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~ 155 (225)
T 2yhc_A 80 VMYMRGLTNMA----LDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAE 155 (225)
T ss_dssp HHHHHHHHHHH----HHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----hhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999976 32 111112344555589999999999987554 56788
Q ss_pred HHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHH
Q 010864 260 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH---RAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIY 336 (498)
Q Consensus 260 ~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~---~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~ 336 (498)
+|...|++ ++|+..|+++++..|+++ .+++.+|.+|..+|+ +.+|..+
T Consensus 156 ~~~~~~~~----------~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~-------------------~~~A~~~ 206 (225)
T 2yhc_A 156 YYTERGAW----------VAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM-------------------NAQAEKV 206 (225)
T ss_dssp HHHHHTCH----------HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC-------------------HHHHHHH
T ss_pred HHHHcCcH----------HHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC-------------------cHHHHHH
Confidence 88888888 999999999999999986 789999999999999 8999999
Q ss_pred HHHHHhcCCCHH
Q 010864 337 IAAAHALKPSYS 348 (498)
Q Consensus 337 ~~~Al~l~p~~~ 348 (498)
++++....|+..
T Consensus 207 ~~~l~~~~~~~~ 218 (225)
T 2yhc_A 207 AKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHCCSCCC
T ss_pred HHHHHhhCCCch
Confidence 999998888754
No 59
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.73 E-value=5.6e-17 Score=168.78 Aligned_cols=173 Identities=15% Similarity=0.071 Sum_probs=142.3
Q ss_pred hhhhcHHHHHHHHHHhhhcch----------------h--hH--HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010864 111 QLAEQNNAAMELINSVTGVDE----------------E--GR--SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQE 170 (498)
Q Consensus 111 q~~~~~~~A~~~~~~~~~~~~----------------~--~~--~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 170 (498)
...+++++|...+.++..+.. . ++ ...++|++|+.+|+++++++|++++++..+|.++..
T Consensus 105 ~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~ 184 (472)
T 4g1t_A 105 YHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYR 184 (472)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 345788899888888766531 1 12 224689999999999999999999999999999776
Q ss_pred hcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 171 SADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
++.. +.+++|++.|+++++++|++..++.++|..+.......|++++|+ ..|++++..+|++
T Consensus 185 l~~~-----------~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~-------~~~~~al~~~~~~ 246 (472)
T 4g1t_A 185 LDNW-----------PPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGE-------KLVEEALEKAPGV 246 (472)
T ss_dssp HHHS-----------CCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHH-------HHHHHHHHHCSSC
T ss_pred hcCc-----------hHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHH-------HHHHHHHHhCccH
Confidence 5430 117889999999999999999999999999887222244555666 7999999999999
Q ss_pred HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchh
Q 010864 251 PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAED 311 (498)
Q Consensus 251 ~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~ 311 (498)
..+++++|.+|...|++ ++|+..|+++++++|+++.+++++|.+|...+..
T Consensus 247 ~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~ 297 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEP----------DKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQ 297 (472)
T ss_dssp HHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCch----------HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999876543
No 60
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.6e-17 Score=171.19 Aligned_cols=170 Identities=16% Similarity=0.156 Sum_probs=136.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++.++|++..++..+|.+|...|+ +++|+..|+++++++|++..+++++|
T Consensus 314 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la 379 (514)
T 2gw1_A 314 NFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENK--------------FDDCETLFSEAKRKFPEAPEVPNFFA 379 (514)
T ss_dssp HHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTC--------------HHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHcccCHHHHHHHH
Confidence 3445556666666666666666666666666666666665 77777777777777777777777777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHH---hcCcchHHhhhhhHHHHHHHH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ------ALNNWGLALQE---LSAIVPAREKQTIVRTAISKF 284 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~------a~~~lg~~l~~---~g~~~~a~~~~~~~~~Ai~~~ 284 (498)
.++.. .|++++|+ ..|++++..+|++.. +++++|.++.. .|++ ++|+..|
T Consensus 380 ~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~A~~~~ 438 (514)
T 2gw1_A 380 EILTD----KNDFDKAL-------KQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENF----------IEATNLL 438 (514)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHH----------HHHHHHH
T ss_pred HHHHH----CCCHHHHH-------HHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCH----------HHHHHHH
Confidence 77777 77777777 688888888888754 99999999999 9999 9999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 285 RAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 285 ~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+++++++|++..+++++|.+|...|+ +.+|..+|+++++++|++......+...
T Consensus 439 ~~a~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 492 (514)
T 2gw1_A 439 EKASKLDPRSEQAKIGLAQMKLQQED-------------------IDEAITLFEESADLARTMEEKLQAITFA 492 (514)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhcC-------------------HHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 99999999999999999999999999 9999999999999999999666655443
No 61
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.72 E-value=1.2e-17 Score=167.97 Aligned_cols=140 Identities=16% Similarity=0.128 Sum_probs=135.1
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC----------
Q 010864 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---------- 205 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---------- 205 (498)
.++++++|+..|++++..+|+++.+++++|.+|+.+|+ |++|+..|++++.++|++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 190 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGK--------------YKQALLQYKKIVSWLEYESSFSNEEAQK 190 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHTTTCCCCCSHHHHH
T ss_pred EEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHhhccccCChHHHHH
Confidence 46778889999999999999999999999999999999 999999999999999998
Q ss_pred -----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH
Q 010864 206 -----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 280 (498)
Q Consensus 206 -----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A 280 (498)
..+|+++|.+|.. +|++++|+ .+|+++++++|++..+++++|.+|..+|++ ++|
T Consensus 191 ~~~~~~~~~~nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~~A 249 (336)
T 1p5q_A 191 AQALRLASHLNLAMCHLK----LQAFSAAI-------ESCNKALELDSNNEKGLSRRGEAHLAVNDF----------ELA 249 (336)
T ss_dssp HHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred HHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHCCCH----------HHH
Confidence 7999999999999 99999999 699999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 281 ISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 281 i~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+.+|+++++++|++..+++++|.++..+|+
T Consensus 250 ~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 250 RADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998
No 62
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.72 E-value=1.8e-17 Score=146.43 Aligned_cols=126 Identities=16% Similarity=0.078 Sum_probs=117.2
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc
Q 010864 144 AKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR 223 (498)
Q Consensus 144 ~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~ 223 (498)
-..|++++.++|++..+++++|.++...|+ +++|+..|++++.++|++..+|+++|.++.. +
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~ 68 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGX--------------YEDAHXVFQALCVLDHYDSRFFLGLGACRQA----M 68 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----T
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCC--------------hHHHHHHHHHHHHcCcccHHHHHHHHHHHHH----H
Confidence 356899999999999999999999999999 9999999999999999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010864 224 GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGT 303 (498)
Q Consensus 224 g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~ 303 (498)
|++++|+ ..|++++.++|+++.+++++|.+|..+|++ ++|+.+|+++++++|+++.....+..
T Consensus 69 g~~~~A~-------~~~~~al~l~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~~ 131 (148)
T 2vgx_A 69 GQYDLAI-------HSYSYGAVMDIXEPRFPFHAAECLLQXGEL----------AEAESGLFLAQELIANXPEFXELSTR 131 (148)
T ss_dssp TCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred hhHHHHH-------HHHHHHHhcCCCCchHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHCcCCCcchHHHHH
Confidence 9999999 699999999999999999999999999999 99999999999999988765444443
Q ss_pred H
Q 010864 304 V 304 (498)
Q Consensus 304 ~ 304 (498)
+
T Consensus 132 ~ 132 (148)
T 2vgx_A 132 V 132 (148)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.72 E-value=5.1e-17 Score=159.51 Aligned_cols=155 Identities=10% Similarity=-0.021 Sum_probs=144.6
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|+++++.+|+++.+++++|.+|..+|+ +++|+..|++++..+|+....+.+.+
T Consensus 127 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~--------------~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 127 LMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNR--------------SEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC--------------HHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCC--------------HHHHHHHHHhCchhhcchHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999998887888888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
..+.. .++..+|+ ..|+++++.+|+++.+++++|.+|...|++ ++|+..|+++++++|+
T Consensus 193 ~~l~~----~~~~~~a~-------~~l~~al~~~P~~~~~~~~la~~l~~~g~~----------~~A~~~l~~~l~~~p~ 251 (287)
T 3qou_A 193 IELLX----QAADTPEI-------QQLQQQVAENPEDAALATQLALQLHQVGRN----------EEALELLFGHLRXDLT 251 (287)
T ss_dssp HHHHH----HHTSCHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTT
T ss_pred HHHHh----hcccCccH-------HHHHHHHhcCCccHHHHHHHHHHHHHcccH----------HHHHHHHHHHHhcccc
Confidence 88888 88888888 699999999999999999999999999999 9999999999999999
Q ss_pred C--HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 294 F--HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 294 ~--~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
+ ..++.+||.++..+|+ ...+...|.+++.
T Consensus 252 ~~~~~a~~~l~~~~~~~g~-------------------~~~a~~~~r~al~ 283 (287)
T 3qou_A 252 AADGQTRXTFQEILAALGT-------------------GDALASXYRRQLY 283 (287)
T ss_dssp GGGGHHHHHHHHHHHHHCT-------------------TCHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHcCC-------------------CCcHHHHHHHHHH
Confidence 9 8999999999999998 6677777777764
No 64
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.71 E-value=2.1e-16 Score=147.31 Aligned_cols=139 Identities=16% Similarity=0.102 Sum_probs=123.1
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN----------------WAIAISDR 219 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~----------------lg~~~~~~ 219 (498)
..++.++..|..+...|+ +++|+..|+++++++|++..+|++ +|.+|..
T Consensus 2 ~~~~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~- 66 (208)
T 3urz_A 2 QSVDEMLQKVSAAIEAGQ--------------NGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKK- 66 (208)
T ss_dssp -CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH-
Confidence 357788999999999999 999999999999999999999999 9999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHH
Q 010864 220 AKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIY 299 (498)
Q Consensus 220 ~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~ 299 (498)
+|++++|+ ..|+++++++|+++.+++++|.+|..+|++ ++|+.+|+++++++|+++.+++
T Consensus 67 ---~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~P~~~~a~~ 126 (208)
T 3urz_A 67 ---NRNYDKAY-------LFYKELLQKAPNNVDCLEACAEMQVCRGQE----------KDALRMYEKILQLEADNLAANI 126 (208)
T ss_dssp ---TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCTTCHHHHH
T ss_pred ---CCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCCHHHHH
Confidence 99999999 699999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 300 NLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 300 ~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
++|.+|+..|+.. ...+..+|.+++...|.
T Consensus 127 ~lg~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~ 156 (208)
T 3urz_A 127 FLGNYYYLTAEQE-----------------KKKLETDYKKLSSPTKM 156 (208)
T ss_dssp HHHHHHHHHHHHH-----------------HHHHHHHHC---CCCHH
T ss_pred HHHHHHHHHhHHH-----------------HHHHHHHHHHHhCCCch
Confidence 9999999887522 34566677776654443
No 65
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.70 E-value=2.9e-16 Score=150.44 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=143.5
Q ss_pred HhhccHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHH
Q 010864 135 SRQRILTFAAKRYANAIER----NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFY 210 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~ 210 (498)
...|++++|+..|+++++. +|.++.+++.+|.++...|+ +++|+..|+++++++|++..+++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~ 81 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGL--------------RALARNDFSQALAIRPDMPEVFN 81 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHcCCCcHHHHH
Confidence 4569999999999999998 35678999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 211 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 211 ~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
++|.++.. .|++++|+ ..|+++++++|++..+++++|.+|..+|++ ++|+.+|++++++
T Consensus 82 ~la~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 82 YLGIYLTQ----AGNFDAAY-------EAFDSVLELDPTYNYAHLNRGIALYYGGRD----------KLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----ccCHHHHH-------HHHHHHHhcCccccHHHHHHHHHHHHhccH----------HHHHHHHHHHHHh
Confidence 99999999 99999999 689999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 291 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 291 ~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
.|++......++.+ ...|+ +.+|..+|.+++...|++.
T Consensus 141 ~~~~~~~~~~~~~~-~~~~~-------------------~~~A~~~~~~~~~~~~~~~ 178 (275)
T 1xnf_A 141 DPNDPFRSLWLYLA-EQKLD-------------------EKQAKEVLKQHFEKSDKEQ 178 (275)
T ss_dssp CTTCHHHHHHHHHH-HHHHC-------------------HHHHHHHHHHHHHHSCCCS
T ss_pred CCCChHHHHHHHHH-HHhcC-------------------HHHHHHHHHHHHhcCCcch
Confidence 99998777766654 55566 7788888888888777665
No 66
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.70 E-value=1.8e-15 Score=149.71 Aligned_cols=194 Identities=9% Similarity=-0.001 Sum_probs=166.9
Q ss_pred hhhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--CcCCCCCCCCchhhhHH
Q 010864 112 LAEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA--DNVSLDSTSPSKDALLE 189 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g--~~~~~~~~~~~~~~~~~ 189 (498)
.+.++..++..+..+... ....++|+.++.++|.++|++..+|+.+|.++..++ + ++
T Consensus 28 y~~~y~~~~~~~~a~~~~-------~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~--------------~~ 86 (306)
T 3dra_A 28 YDEDYKQIMGLLLALMKA-------EEYSERALHITELGINELASHYTIWIYRFNILKNLPNRN--------------LY 86 (306)
T ss_dssp CCHHHHHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSC--------------HH
T ss_pred eCHHHHHHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccccc--------------HH
Confidence 456777777777766544 444578999999999999999999999999999999 7 99
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Q 010864 190 EACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR---GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 266 (498)
Q Consensus 190 ~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~---g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 266 (498)
+++..+++++.++|++..+|+..+.++....... +++.+++ ..+.++++.+|++..+|++.+.++..+|.
T Consensus 87 eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL-------~~~~~~l~~~pkny~aW~~R~~vl~~l~~ 159 (306)
T 3dra_A 87 DELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREF-------DILEAMLSSDPKNHHVWSYRKWLVDTFDL 159 (306)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999993321116 6777777 79999999999999999999999999999
Q ss_pred cchHHhhhhhHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC
Q 010864 267 IVPAREKQTIVR--TAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 344 (498)
Q Consensus 267 ~~~a~~~~~~~~--~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~ 344 (498)
+ + +++.++.++++++|.+..+|++.+.++..+++. .....+.+++.++.+++.++
T Consensus 160 ~----------~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~-------------~~~~~~~eEl~~~~~aI~~~ 216 (306)
T 3dra_A 160 H----------NDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHL-------------ATDNTIDEELNYVKDKIVKC 216 (306)
T ss_dssp T----------TCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGG-------------CCHHHHHHHHHHHHHHHHHC
T ss_pred c----------ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc-------------chhhhHHHHHHHHHHHHHhC
Confidence 8 7 999999999999999999999999999988751 12446899999999999999
Q ss_pred CCHHHHHHHHHH
Q 010864 345 PSYSVYSSALRL 356 (498)
Q Consensus 345 p~~~~~~~~l~~ 356 (498)
|++......++.
T Consensus 217 p~n~SaW~y~~~ 228 (306)
T 3dra_A 217 PQNPSTWNYLLG 228 (306)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCccHHHHHHH
Confidence 999954444443
No 67
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.70 E-value=1.1e-15 Score=150.32 Aligned_cols=166 Identities=7% Similarity=-0.049 Sum_probs=146.2
Q ss_pred HHhhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIER--NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 211 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~ 211 (498)
+...+++++|+..|++.+.. +|+++.+++.+|.+|...|+ +++|++.|++ |++..++.+
T Consensus 75 ~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~--------------~~~Al~~l~~-----~~~~~~~~~ 135 (291)
T 3mkr_A 75 LASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQN--------------PDAALRTLHQ-----GDSLECMAM 135 (291)
T ss_dssp HHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTC--------------HHHHHHHHTT-----CCSHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHhC-----CCCHHHHHH
Confidence 45578999999999999986 69999999999999999999 9999999998 899999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH--HHHHhcCcchHHhhhhhHHHHHHHHHHHHH
Q 010864 212 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL--ALQELSAIVPAREKQTIVRTAISKFRAAIQ 289 (498)
Q Consensus 212 lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~--~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~ 289 (498)
+|.+|.. +|++++|+ +.|+++++.+|++.......+. ++...|++ ++|+..|+++++
T Consensus 136 l~~~~~~----~g~~~~A~-------~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~----------~eA~~~~~~~l~ 194 (291)
T 3mkr_A 136 TVQILLK----LDRLDLAR-------KELKKMQDQDEDATLTQLATAWVSLAAGGEKL----------QDAYYIFQEMAD 194 (291)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHH----------HHHHHHHHHHHH
T ss_pred HHHHHHH----CCCHHHHH-------HHHHHHHhhCcCcHHHHHHHHHHHHHhCchHH----------HHHHHHHHHHHH
Confidence 9999999 99999999 6889999999998644433332 22233666 999999999999
Q ss_pred hcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 290 LQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 290 l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
..|+++.+++++|.++..+|+ +.+|..+|+++++++|++......+..+.
T Consensus 195 ~~p~~~~~~~~la~~~~~~g~-------------------~~eA~~~l~~al~~~p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 195 KCSPTLLLLNGQAACHMAQGR-------------------WEAAEGVLQEALDKDSGHPETLINLVVLS 244 (291)
T ss_dssp HSCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999 99999999999999999997666665443
No 68
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.70 E-value=1.2e-16 Score=156.97 Aligned_cols=185 Identities=15% Similarity=0.074 Sum_probs=145.2
Q ss_pred hhhcHHHHHHHHHHhhhcc----------------hhhHHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 010864 112 LAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQ 169 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~ 169 (498)
..+++++|+..+.+++... +..+..+|++++|+.+|++++++.+.. +.++.++|.+|.
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 128 (292)
T 1qqe_A 49 LRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE 128 (292)
T ss_dssp HTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3456666666666655542 234667899999999999999998754 568999999999
Q ss_pred Hh-cCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 010864 170 ES-ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK 242 (498)
Q Consensus 170 ~~-g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~ 242 (498)
.. |+ +++|+.+|++|+++.|.. ..++.++|.++.. +|++++|+ .+|++
T Consensus 129 ~~lg~--------------~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~ 183 (292)
T 1qqe_A 129 NDLHD--------------YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEAS-------DIYSK 183 (292)
T ss_dssp HTTCC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHH
T ss_pred HhhcC--------------HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHH-------HHHHH
Confidence 96 99 999999999999998864 5789999999999 99999999 69999
Q ss_pred HHhcCCCCHH-------HHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHcch
Q 010864 243 AVQLNWNSPQ-------ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRA-----IYNLGTVLYGLAE 310 (498)
Q Consensus 243 Al~l~P~~~~-------a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a-----~~~Lg~~~~~~g~ 310 (498)
+++++|++.. +++++|.++..+|++ ++|+.+|+++++++|++... +.+++.++.. ++
T Consensus 184 al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~-~~ 252 (292)
T 1qqe_A 184 LIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA----------VAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNE-GD 252 (292)
T ss_dssp HHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHGGGCC---------HHHHHHHHHHHHT-TC
T ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHc-CC
Confidence 9999887643 689999999999999 99999999999999998764 3445555431 11
Q ss_pred hHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 311 DTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
.+.+..|+..|.+++.++|.+.
T Consensus 253 ----------------~~~~~~A~~~~~~~~~l~~~~~ 274 (292)
T 1qqe_A 253 ----------------SEQLSEHCKEFDNFMRLDKWKI 274 (292)
T ss_dssp ----------------TTTHHHHHHHHTTSSCCCHHHH
T ss_pred ----------------HHHHHHHHHHhccCCccHHHHH
Confidence 1118899999999999999776
No 69
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.7e-16 Score=166.08 Aligned_cols=191 Identities=15% Similarity=0.152 Sum_probs=149.8
Q ss_pred hhcHHHHHHHHHHhhhcc---------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCc
Q 010864 113 AEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 183 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~---------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~ 183 (498)
.+++++|...+.+++... +..+...|++++|+..|++++..+|++..+++.+|.+|...|+
T Consensus 250 ~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------- 319 (514)
T 2gw1_A 250 KNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQN---------- 319 (514)
T ss_dssp SSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTC----------
T ss_pred CCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCC----------
Confidence 355666666666554432 2234456677777777777777777777777777777777777
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++.+|++..+++++|.++..
T Consensus 320 ----~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~~~~~ 384 (514)
T 2gw1_A 320 ----YDQAGKDFDKAKELDPENIFPYIQLACLAYR----ENKFDDCE-------TLFSEAKRKFPEAPEVPNFFAEILTD 384 (514)
T ss_dssp ----TTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT----TTCHHHHH-------HHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhChhhHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 7777777777777777777777777777777 77777777 68888888899999999999999999
Q ss_pred hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHH---cchhHHhccCCCCCCCCChhHHHHHHH
Q 010864 264 LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR------AIYNLGTVLYG---LAEDTLRTGGTVNPREVSPNELYSQSA 334 (498)
Q Consensus 264 ~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~------a~~~Lg~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~A~ 334 (498)
.|++ ++|+.+|++++++.|++.. +++++|.++.. .|+ +.+|.
T Consensus 385 ~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------~~~A~ 435 (514)
T 2gw1_A 385 KNDF----------DKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN-------------------FIEAT 435 (514)
T ss_dssp TTCH----------HHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH-------------------HHHHH
T ss_pred CCCH----------HHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC-------------------HHHHH
Confidence 9998 9999999999999999865 99999999999 998 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHH
Q 010864 335 IYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 335 ~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
.+|++++.++|++......+..+
T Consensus 436 ~~~~~a~~~~~~~~~~~~~la~~ 458 (514)
T 2gw1_A 436 NLLEKASKLDPRSEQAKIGLAQM 458 (514)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHH
Confidence 99999999999988655544443
No 70
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.69 E-value=4.4e-17 Score=143.89 Aligned_cols=123 Identities=11% Similarity=0.153 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcc
Q 010864 189 EEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIV 268 (498)
Q Consensus 189 ~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~ 268 (498)
-.+...|++++.++|++..+++++|.++.. .|++++|+ ..|++++.++|+++.+|+++|.++..+|++
T Consensus 4 ~~~~~~~~~al~~~p~~~~~~~~~g~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~- 71 (148)
T 2vgx_A 4 GSGGGTIAMLNEISSDTLEQLYSLAFNQYQ----SGXYEDAH-------XVFQALCVLDHYDSRFFLGLGACRQAMGQY- 71 (148)
T ss_dssp --CCCSHHHHTTCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-
T ss_pred cchhhhHHHHHcCCHhhHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHHcCcccHHHHHHHHHHHHHHhhH-
Confidence 334567899999999999999999999999 99999999 699999999999999999999999999999
Q ss_pred hHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 269 PAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 269 ~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|..+|+++++++|+++
T Consensus 72 ---------~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 72 ---------DLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGE-------------------LAEAESGLFLAQELIANXP 123 (148)
T ss_dssp ---------HHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHTTCG
T ss_pred ---------HHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHCcCCC
Confidence 999999999999999999999999999999999 9999999999999999876
Q ss_pred HHH
Q 010864 349 VYS 351 (498)
Q Consensus 349 ~~~ 351 (498)
.+.
T Consensus 124 ~~~ 126 (148)
T 2vgx_A 124 EFX 126 (148)
T ss_dssp GGH
T ss_pred cch
Confidence 443
No 71
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.69 E-value=9e-17 Score=140.26 Aligned_cols=130 Identities=15% Similarity=0.054 Sum_probs=117.3
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC
Q 010864 145 KRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG 224 (498)
Q Consensus 145 ~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g 224 (498)
..|++++.++|++..+++.+|.++...|+ +++|+..|++++.++|++..+|+++|.++.. +|
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g 66 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGK--------------WDDAQKIFQALCMLDHYDARYFLGLGACRQS----LG 66 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHcc--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----Hh
Confidence 56888999999999999999999999999 9999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 225 RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV 304 (498)
Q Consensus 225 ~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~ 304 (498)
++++|+ ..|++++.++|+++.+++++|.+|..+|++ ++|+.+|+++++++|+++........+
T Consensus 67 ~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 67 LYEQAL-------QSYSYGALMDINEPRFPFHAAECHLQLGDL----------DGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp CHHHHH-------HHHHHHHHHCTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred hHHHHH-------HHHHHHHhcCCCCcHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 999999 699999999999999999999999999999 999999999999999988766655555
Q ss_pred HHHcc
Q 010864 305 LYGLA 309 (498)
Q Consensus 305 ~~~~g 309 (498)
...++
T Consensus 130 ~~~l~ 134 (142)
T 2xcb_A 130 GAMLE 134 (142)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 72
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.69 E-value=7.4e-17 Score=143.09 Aligned_cols=122 Identities=16% Similarity=0.087 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHHHHcCC
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-------LHD-----AFYNWAIAISDRAKMRGR 225 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~-------~~~-----a~~~lg~~~~~~~~~~g~ 225 (498)
+..+.++|..++..|+ |++|+..|++||+++|+ +.. +|+|+|.++.. +|+
T Consensus 11 a~~~~~~G~~l~~~g~--------------~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~----Lgr 72 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGE--------------YDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG----LRS 72 (159)
T ss_dssp HHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH----CCC
Confidence 5678999999999999 99999999999999999 555 99999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010864 226 TKEAEELWKQATKNYEKAVQLNWNSPQAL----NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNL 301 (498)
Q Consensus 226 ~~eA~~~~~~Al~~~~~Al~l~P~~~~a~----~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~L 301 (498)
+++|+..|++|+..|+++++++|++..+| +++|.+|..+|++ ++|+.+|++|++++|++..+...+
T Consensus 73 ~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~----------eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 73 FDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRG----------AEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCH----------HHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999999999999999 9999999999999 999999999999999988776666
Q ss_pred HHHHHH
Q 010864 302 GTVLYG 307 (498)
Q Consensus 302 g~~~~~ 307 (498)
..+...
T Consensus 143 ~~~~~~ 148 (159)
T 2hr2_A 143 ERMMEV 148 (159)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 73
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.69 E-value=2.1e-15 Score=149.11 Aligned_cols=153 Identities=12% Similarity=0.052 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHH
Q 010864 140 LTFAAKRYANAIE-RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD-AFYNWAIAIS 217 (498)
Q Consensus 140 ~~~A~~~~~~al~-~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~-a~~~lg~~~~ 217 (498)
+++|+..|+++++ ++|++..+|.++|.++...|+ +++|+..|+++++++|++.. +|.++|.++.
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMK--------------YEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 4999999999999 799999999999999999999 99999999999999999987 9999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH
Q 010864 218 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE-LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 218 ~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~-~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~ 296 (498)
. .|++++|+ ..|+++++.+|.+..++...+.+... .|++ ++|+..|++++++.|+++.
T Consensus 146 ~----~~~~~~A~-------~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~ 204 (308)
T 2ond_A 146 R----AEGIKSGR-------MIFKKAREDARTRHHVYVTAALMEYYCSKDK----------SVAFKIFELGLKKYGDIPE 204 (308)
T ss_dssp H----HHCHHHHH-------HHHHHHHTSTTCCTHHHHHHHHHHHHTSCCH----------HHHHHHHHHHHHHHTTCHH
T ss_pred H----hcCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCcHH
Confidence 9 99999988 69999999999998888877766443 6888 9999999999999999999
Q ss_pred HHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhc---CCC
Q 010864 297 AIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL---KPS 346 (498)
Q Consensus 297 a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---~p~ 346 (498)
+|.++|.++..+|+ +.+|..+|++++.. .|+
T Consensus 205 ~~~~~~~~~~~~g~-------------------~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 205 YVLAYIDYLSHLNE-------------------DNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp HHHHHHHHHHTTCC-------------------HHHHHHHHHHHHHSSSSCGG
T ss_pred HHHHHHHHHHHCCC-------------------HHHHHHHHHHHHhccCCCHH
Confidence 99999999999998 89999999999995 554
No 74
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.68 E-value=1.4e-15 Score=146.03 Aligned_cols=173 Identities=17% Similarity=0.101 Sum_probs=148.0
Q ss_pred hhcHHHHHHHHHHhhhcc-------------hhhHHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH------
Q 010864 113 AEQNNAAMELINSVTGVD-------------EEGRSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQE------ 170 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~-------------~~~~~~~g~~~~A~~~~~~al~~~P~~---~~a~~~lg~~~~~------ 170 (498)
.+++++|+..|.+++... +.++..+|++++|+..|+++++++|++ +.+++.+|.++..
T Consensus 28 ~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 28 QGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 467788888888777653 334678899999999999999998854 6899999999999
Q ss_pred --hcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHHHHHcCCHHHHHH
Q 010864 171 --SADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF-----------------YNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 171 --~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~-----------------~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
+|+ +++|+..|+++++.+|++..+. +++|.+|.. +|++++|+
T Consensus 108 ~~~~~--------------~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~- 168 (261)
T 3qky_A 108 LDQTD--------------TRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER----RELYEAAA- 168 (261)
T ss_dssp SCCHH--------------HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred ccchh--------------HHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHH-
Confidence 777 9999999999999999986655 889999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH---HHHHHHHHHH
Q 010864 232 LWKQATKNYEKAVQLNWN---SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH---RAIYNLGTVL 305 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~---~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~---~a~~~Lg~~~ 305 (498)
..|+++++.+|+ ...+++++|.+|..+|....+..+.|++++|+..|+++++..|+++ .+...++.++
T Consensus 169 ------~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~ 242 (261)
T 3qky_A 169 ------VTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRAR 242 (261)
T ss_dssp ------HHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHH
Confidence 689999999998 5789999999999997665555566777999999999999999994 5677788888
Q ss_pred HHcch
Q 010864 306 YGLAE 310 (498)
Q Consensus 306 ~~~g~ 310 (498)
..+++
T Consensus 243 ~~~~~ 247 (261)
T 3qky_A 243 QRLTE 247 (261)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87776
No 75
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.68 E-value=5.2e-16 Score=148.51 Aligned_cols=165 Identities=16% Similarity=0.184 Sum_probs=143.3
Q ss_pred hHHhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh---
Q 010864 133 GRSRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--- 201 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--- 201 (498)
.+...|++++|+.+|++++++ +|....++.++|.+|..+|+ +++|+..|++++.+
T Consensus 52 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 52 VYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGK--------------YKEAEPLCKRALEIREK 117 (283)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHHHHH
Confidence 467789999999999999988 46678899999999999999 99999999999999
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCcchHHhhhh
Q 010864 202 -----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQT 275 (498)
Q Consensus 202 -----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~a~~~~~ 275 (498)
+|....+++++|.++.. +|++++|+..|++++..+++.... +|....+++++|.+|..+|++
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-------- 185 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQN----QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY-------- 185 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH--------
T ss_pred HcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH--------
Confidence 57778899999999999 999999997666666665544322 566788999999999999999
Q ss_pred hHHHHHHHHHHHHHh-------------------------------------------------cCCCHHHHHHHHHHHH
Q 010864 276 IVRTAISKFRAAIQL-------------------------------------------------QFDFHRAIYNLGTVLY 306 (498)
Q Consensus 276 ~~~~Ai~~~~~Al~l-------------------------------------------------~P~~~~a~~~Lg~~~~ 306 (498)
++|+.+|++++++ .|....++.++|.+|.
T Consensus 186 --~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 263 (283)
T 3edt_B 186 --QDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYR 263 (283)
T ss_dssp --HHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 9999999999986 2455678899999999
Q ss_pred HcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC
Q 010864 307 GLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 344 (498)
Q Consensus 307 ~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~ 344 (498)
.+|+ +.+|..+|++++++.
T Consensus 264 ~~g~-------------------~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 264 RQGK-------------------LEAAHTLEDCASRNR 282 (283)
T ss_dssp HTTC-------------------HHHHHHHHHHHHTTC
T ss_pred HcCC-------------------HHHHHHHHHHHHHhh
Confidence 9998 899999999998764
No 76
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.68 E-value=1.4e-15 Score=150.46 Aligned_cols=170 Identities=14% Similarity=0.081 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-------cCcCCCCCCCCchhhhHHHHHHHHHHHHH-hCCCCHHHHHHH
Q 010864 141 TFAAKRYANAIERNPEDYDALYNWALVLQES-------ADNVSLDSTSPSKDALLEEACKKYDEATR-LCPTLHDAFYNW 212 (498)
Q Consensus 141 ~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-------g~~~~~~~~~~~~~~~~~~A~~~~~~Al~-l~p~~~~a~~~l 212 (498)
++|+..|++++..+|+++++|+++|.++... |+ .....+.+++|+..|++|++ ++|++..+|.++
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~-------~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~ 105 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGD-------MNNAKLFSDEAANIYERAISTLLKKNMLLYFAY 105 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSC-------CHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccc-------hhhcccchHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 7899999999999999999999999999754 55 11112234999999999999 799999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ-ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 291 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~-a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~ 291 (498)
|.++.. .|++++|. ..|+++++++|++.. +|.++|.++.+.|++ ++|+..|++|+++.
T Consensus 106 ~~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~a~~~~ 164 (308)
T 2ond_A 106 ADYEES----RMKYEKVH-------SIYNRLLAIEDIDPTLVYIQYMKFARRAEGI----------KSGRMIFKKAREDA 164 (308)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHTSSSSCTHHHHHHHHHHHHHHHCH----------HHHHHHHHHHHTST
T ss_pred HHHHHh----cCCHHHHH-------HHHHHHHhccccCccHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcC
Confidence 999999 99999999 699999999999987 999999999999999 99999999999999
Q ss_pred CCCHHHHHHHHHHHHH-cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 292 FDFHRAIYNLGTVLYG-LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 292 P~~~~a~~~Lg~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
|....++...+.+.+. .|+ +..|..+|++++++.|++..+...+..+
T Consensus 165 p~~~~~~~~~a~~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~~~~~~~~ 212 (308)
T 2ond_A 165 RTRHHVYVTAALMEYYCSKD-------------------KSVAFKIFELGLKKYGDIPEYVLAYIDY 212 (308)
T ss_dssp TCCTHHHHHHHHHHHHTSCC-------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 9998888877766543 577 8999999999999999998665554443
No 77
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=9.8e-16 Score=130.17 Aligned_cols=119 Identities=16% Similarity=0.019 Sum_probs=112.4
Q ss_pred CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010864 155 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 234 (498)
Q Consensus 155 P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~ 234 (498)
|..+..|+.+|..++..|+ +++|+..|+++++++|++..+|+++|.++.. +|++++|+
T Consensus 1 p~~a~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~----~~~~~~A~---- 58 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSD--------------WPNAVKAYTEMIKRAPEDARGYSNRAAALAK----LMSFPEAI---- 58 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH----
T ss_pred CchHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hcCHHHHH----
Confidence 4457889999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHc
Q 010864 235 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ------FDFHRAIYNLGTVLYGL 308 (498)
Q Consensus 235 ~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~------P~~~~a~~~Lg~~~~~~ 308 (498)
..|+++++++|++..+++++|.++..+|++ ++|+..|+++++++ |++..++..++.+...+
T Consensus 59 ---~~~~~al~~~p~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 59 ---ADCNKAIEKDPNFVRAYIRKATAQIAVKEY----------ASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp ---HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHhCCCcHHHHHHHHHHHHHHhCH----------HHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 699999999999999999999999999999 99999999999999 99999999998887543
No 78
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=151.73 Aligned_cols=168 Identities=17% Similarity=0.192 Sum_probs=144.7
Q ss_pred hhHHhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-
Q 010864 132 EGRSRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC- 202 (498)
Q Consensus 132 ~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~- 202 (498)
..+...|++++|+.+|++++.+ +|....+++++|.+|...|+ +++|+..|++++++.
T Consensus 77 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~a~~~~~ 142 (311)
T 3nf1_A 77 LVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGK--------------YKEAEPLCKRALEIRE 142 (311)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCc--------------HHHHHHHHHHHHHHHH
Confidence 3466789999999999999988 46678899999999999999 999999999999984
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCcchHHhhh
Q 010864 203 -------PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQ 274 (498)
Q Consensus 203 -------p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~a~~~~ 274 (498)
|....+++++|.++.. .|++++|++.|++++..+++.... +|....+++++|.+|..+|++
T Consensus 143 ~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~------- 211 (311)
T 3nf1_A 143 KVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF------- 211 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH-------
T ss_pred HhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH-------
Confidence 5667899999999999 999999997666666555443211 566788999999999999999
Q ss_pred hhHHHHHHHHHHHHHh-------------------------------------------------cCCCHHHHHHHHHHH
Q 010864 275 TIVRTAISKFRAAIQL-------------------------------------------------QFDFHRAIYNLGTVL 305 (498)
Q Consensus 275 ~~~~~Ai~~~~~Al~l-------------------------------------------------~P~~~~a~~~Lg~~~ 305 (498)
++|+.+|++++++ +|....+++++|.+|
T Consensus 212 ---~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~ 288 (311)
T 3nf1_A 212 ---KQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALY 288 (311)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHH
Confidence 9999999999975 466778899999999
Q ss_pred HHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 306 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
..+|+ +.+|..+|++++++.|.
T Consensus 289 ~~~g~-------------------~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 289 RRQGK-------------------FEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHTC-------------------HHHHHHHHHHHHHHHC-
T ss_pred HHCCC-------------------HHHHHHHHHHHHHHhhc
Confidence 99999 99999999999998775
No 79
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.67 E-value=7e-15 Score=147.31 Aligned_cols=197 Identities=9% Similarity=0.006 Sum_probs=169.0
Q ss_pred hhhhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CcCCCCCCCCchhhhHH
Q 010864 111 QLAEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLDSTSPSKDALLE 189 (498)
Q Consensus 111 q~~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g-~~~~~~~~~~~~~~~~~ 189 (498)
.+..++..++..+..+... .+..++|+.+++++|.++|++..+|+.++.++..++ . ++
T Consensus 48 ~y~~~y~~~~~~~r~~~~~-------~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~--------------l~ 106 (349)
T 3q7a_A 48 MYSEEYKDAMDYFRAIAAK-------EEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKS--------------LE 106 (349)
T ss_dssp CCCHHHHHHHHHHHHHHHT-------TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC--------------HH
T ss_pred eeCHHHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhh--------------HH
Confidence 3567788888888777655 556678999999999999999999999999999999 5 99
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 190 EACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR-G-RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 190 ~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~-g-~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
+++..+++++..+|++..+|+..+.++.. + + ++++++ ..+.++++.+|+|..+|++.+.++.++|.+
T Consensus 107 eEL~~~~~~L~~nPKny~aW~hR~wlL~~----l~~~~~~~EL-------~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~ 175 (349)
T 3q7a_A 107 DELRLMNEFAVQNLKSYQVWHHRLLLLDR----ISPQDPVSEI-------EYIHGSLLPDPKNYHTWAYLHWLYSHFSTL 175 (349)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHH----HCCSCCHHHH-------HHHHHHTSSCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH----hcCCChHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999998 7 7 777777 799999999999999999999999999988
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
+.+ ....+.+++++++++++++|.+..+|++++.++..+++. ......+.++++++.+++.++|+|
T Consensus 176 ~~~--~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~------------~~~~~~~~eELe~~~~aI~~~P~n 241 (349)
T 3q7a_A 176 GRI--SEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGA------------ETSSRSLQDELIYILKSIHLIPHN 241 (349)
T ss_dssp TCC--CHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTC------------CCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred ccc--chhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc------------ccchHHHHHHHHHHHHHHHhCCCC
Confidence 100 011223999999999999999999999999999988751 123456899999999999999999
Q ss_pred HHHHHH
Q 010864 348 SVYSSA 353 (498)
Q Consensus 348 ~~~~~~ 353 (498)
......
T Consensus 242 ~SaW~Y 247 (349)
T 3q7a_A 242 VSAWNY 247 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 954443
No 80
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.66 E-value=6.2e-15 Score=124.24 Aligned_cols=134 Identities=31% Similarity=0.430 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010864 159 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK 238 (498)
Q Consensus 159 ~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~ 238 (498)
++|+.+|.++...|+ +++|+..|+++++.+|++..+++++|.++.. .|++++|+ .
T Consensus 2 ~~~~~l~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~ 56 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPRSAEAWYNLGNAYYK----QGDYDEAI-------E 56 (136)
T ss_dssp HHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-------H
T ss_pred cHHHHHHHHHHHcCc--------------HHHHHHHHHHHHHcCCcchhHHHHHHHHHHH----hcCHHHHH-------H
Confidence 578999999999999 9999999999999999999999999999999 99999999 6
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCC
Q 010864 239 NYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGT 318 (498)
Q Consensus 239 ~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~ 318 (498)
.|++++..+|.+..+++++|.++...|++ ++|+..|+++++..|++..+++++|.++...|+
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------- 118 (136)
T 2fo7_A 57 YYQKALELDPRSAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD-------- 118 (136)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC--------
T ss_pred HHHHHHHHCCCchHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc--------
Confidence 88888899999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 319 VNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 319 ~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
+.+|..+|.+++.++|+
T Consensus 119 -----------~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 119 -----------YDEAIEYYQKALELDPR 135 (136)
T ss_dssp -----------HHHHHHHHHHHHHHSTT
T ss_pred -----------HHHHHHHHHHHHccCCC
Confidence 89999999999999886
No 81
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.65 E-value=8.2e-16 Score=138.61 Aligned_cols=131 Identities=14% Similarity=0.065 Sum_probs=119.1
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|+++.+|+.+|.+|...|+ +++|+..|+++++++|++..+++++|
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~la 85 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQND--------------YSNSLLAYRQALQLRGENAELYAALA 85 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHCSCHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 3457899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HH-HHHHHHHcCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 214 IA-ISDRAKMRGRT--KEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 214 ~~-~~~~~~~~g~~--~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
.+ +.. .|++ ++|+ ..|+++++.+|++..+++++|.+|..+|++ ++|+.+|++++++
T Consensus 86 ~~l~~~----~~~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~ 144 (177)
T 2e2e_A 86 TVLYYQ----ASQHMTAQTR-------AMIDKALALDSNEITALMLLASDAFMQANY----------AQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHH----TTTCCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHT
T ss_pred HHHHHh----cCCcchHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcccH----------HHHHHHHHHHHhh
Confidence 99 778 9998 9999 699999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHH
Q 010864 291 QFDFHRAIY 299 (498)
Q Consensus 291 ~P~~~~a~~ 299 (498)
+|++.....
T Consensus 145 ~p~~~~~~~ 153 (177)
T 2e2e_A 145 NSPRINRTQ 153 (177)
T ss_dssp CCTTSCHHH
T ss_pred CCCCccHHH
Confidence 999865443
No 82
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.65 E-value=7.1e-15 Score=131.30 Aligned_cols=148 Identities=14% Similarity=0.178 Sum_probs=132.6
Q ss_pred hcHHHHHHHHHHhhhcc----------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCc
Q 010864 114 EQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 183 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~ 183 (498)
+++++|+..+.+++... +..+...|++++|+..|+++++.+|++..++..+|.++...|+
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~---------- 91 (186)
T 3as5_A 22 GRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQK---------- 91 (186)
T ss_dssp TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC----------
T ss_pred cCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC----------
Confidence 45555555555554433 2345678999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
+++|+..|++++.++|++..+++++|.++.. .|++++|+ ..|+++++.+|++..++.++|.++..
T Consensus 92 ----~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 92 ----YDLAVPLLIKVAEANPINFNVRFRLGVALDN----LGRFDEAI-------DSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp ----HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH----cCcHHHHH-------HHHHHHHhcCccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 68889999999999999999999999
Q ss_pred hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH
Q 010864 264 LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 264 ~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~ 296 (498)
.|++ ++|+.+|++++++.|++..
T Consensus 157 ~~~~----------~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 157 MGRH----------EEALPHFKKANELDEGASV 179 (186)
T ss_dssp TTCH----------HHHHHHHHHHHHHHHCCCG
T ss_pred cCCH----------HHHHHHHHHHHHcCCCchh
Confidence 9999 9999999999999988653
No 83
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.65 E-value=2.6e-15 Score=133.88 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=112.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 154 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 154 ~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
++.++.+|+.+|.+++..|+ |++|+..|+++++++|++..+|+++|.+|.. +|++++|+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~--- 65 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKE--------------YSKAIDLYTQALSIAPANPIYLSNRAAAYSA----SGQHEKAA--- 65 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH---
T ss_pred hhhhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH----ccCHHHHH---
Confidence 45668899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 234 KQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 234 ~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
..|+++++++|++..+|+++|.+|..+|++ ++|+.+|+++++++|++..++++++.......
T Consensus 66 ----~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 127 (164)
T 3sz7_A 66 ----EDAELATVVDPKYSKAWSRLGLARFDMADY----------KGAKEAYEKGIEAEGNGGSDAMKRGLETTKRK 127 (164)
T ss_dssp ----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999 99999999999999999998888777655443
No 84
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.65 E-value=7.9e-15 Score=157.61 Aligned_cols=191 Identities=10% Similarity=0.028 Sum_probs=158.0
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 216 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~ 216 (498)
....++|+..+++++.++|++..+|+.++.++..+++. .........+++++++|+++++.+|++..+|++.+.++
T Consensus 42 ~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~----~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l 117 (567)
T 1dce_A 42 GELDESVLELTSQILGANPDFATLWNCRREVLQHLETE----KSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (567)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT----SCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccc----cchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34456889999999999999999999999999998861 00011223489999999999999999999999999999
Q ss_pred HHHHHHcC--CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc-CcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 217 SDRAKMRG--RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS-AIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 217 ~~~~~~~g--~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g-~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.. .| ++++++ ..+.+++++||.+..+|++.|.++..+| .+ +++++++.++|+++|+
T Consensus 118 ~~----l~~~~~~~el-------~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~----------~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 118 SR----LPEPNWAREL-------ELCARFLEADERNFHCWDYRRFVAAQAAVAP----------AEELAFTDSLITRNFS 176 (567)
T ss_dssp HT----CSSCCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTCCCH----------HHHHHHHHTTTTTTCC
T ss_pred HH----cccccHHHHH-------HHHHHHHhhccccccHHHHHHHHHHHcCCCh----------HHHHHHHHHHHHHCCC
Confidence 99 99 657777 7999999999999999999999999999 78 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 294 FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 294 ~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+..+|+++|.++..++..... ..........++++++++.+|+.++|++......++.+
T Consensus 177 n~saW~~r~~ll~~l~~~~~~-----~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~l 235 (567)
T 1dce_A 177 NYSSWHYRSCLLPQLHPQPDS-----GPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 235 (567)
T ss_dssp CHHHHHHHHHHHHHHSCCCCS-----SSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHH
T ss_pred CccHHHHHHHHHHhhcccccc-----cccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 999999999999987541000 00001124568999999999999999998555544443
No 85
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.64 E-value=1.4e-15 Score=150.48 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=151.2
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcCcCCCCCCCCchhh
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQESADNVSLDSTSPSKDA 186 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~ 186 (498)
.++++.|...|.++... +...|++++|+.+|.+++++.+.. ..++.++|.+|..+|+
T Consensus 29 ~~~~~~A~~~~~~a~~~----~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~------------- 91 (307)
T 2ifu_A 29 KPDYDSAASEYAKAAVA----FKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQR------------- 91 (307)
T ss_dssp SCCHHHHHHHHHHHHHH----HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------
T ss_pred CCCHHHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-------------
Confidence 36789999999998776 778999999999999999987543 5689999999999999
Q ss_pred hHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010864 187 LLEEACKKYDEATRLCPT------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 260 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~ 260 (498)
+++|+.+|++|+++.+. ...++.++|.+|. .|++++|++.|++|+..+... ........+++++|.+
T Consensus 92 -~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-----~g~~~~A~~~~~~Al~~~~~~-~~~~~~~~~~~~lg~~ 164 (307)
T 2ifu_A 92 -MPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-----PLDLSKAVHLYQQAAAVFENE-ERLRQAAELIGKASRL 164 (307)
T ss_dssp -GGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHH
Confidence 99999999999999543 2468889999883 499999997666666555431 0001126789999999
Q ss_pred HHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHH
Q 010864 261 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSA 334 (498)
Q Consensus 261 l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~ 334 (498)
|..+|++ ++|+.+|++++++.|++ ..++.++|.++..+|+ +.+|.
T Consensus 165 ~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~-------------------~~~A~ 215 (307)
T 2ifu_A 165 LVRQQKF----------DEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRAD-------------------YVAAQ 215 (307)
T ss_dssp HHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHH
T ss_pred HHHcCCH----------HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCC-------------------HHHHH
Confidence 9999999 99999999999987654 3578899999999999 99999
Q ss_pred HHHHHHHhcCCCHH
Q 010864 335 IYIAAAHALKPSYS 348 (498)
Q Consensus 335 ~~~~~Al~l~p~~~ 348 (498)
.+|++++ ++|+..
T Consensus 216 ~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 216 KCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHT-TSTTST
T ss_pred HHHHHHh-CCCCCC
Confidence 9999999 999765
No 86
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=3.7e-16 Score=136.30 Aligned_cols=122 Identities=12% Similarity=0.142 Sum_probs=111.0
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHH
Q 010864 192 CKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAR 271 (498)
Q Consensus 192 ~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~ 271 (498)
-..|++++.++|++..+++++|.++.. .|++++|+ ..|++++..+|+++.+|+++|.+|..+|++
T Consensus 4 ~~~l~~al~~~p~~~~~~~~~a~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~---- 68 (142)
T 2xcb_A 4 GGTLAMLRGLSEDTLEQLYALGFNQYQ----AGKWDDAQ-------KIFQALCMLDHYDARYFLGLGACRQSLGLY---- 68 (142)
T ss_dssp -----CCTTCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHH----HccHHHHH-------HHHHHHHHhCCccHHHHHHHHHHHHHHhhH----
Confidence 357888999999999999999999999 99999999 699999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHH
Q 010864 272 EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 351 (498)
Q Consensus 272 ~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~ 351 (498)
++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|..+|+++++++|+++.+.
T Consensus 69 ------~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~ 123 (142)
T 2xcb_A 69 ------EQALQSYSYGALMDINEPRFPFHAAECHLQLGD-------------------LDGAESGFYSARALAAAQPAHE 123 (142)
T ss_dssp ------HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHTCGGGH
T ss_pred ------HHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCcchH
Confidence 999999999999999999999999999999999 9999999999999999877444
Q ss_pred HH
Q 010864 352 SA 353 (498)
Q Consensus 352 ~~ 353 (498)
..
T Consensus 124 ~~ 125 (142)
T 2xcb_A 124 AL 125 (142)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 87
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.64 E-value=4.5e-16 Score=148.99 Aligned_cols=164 Identities=22% Similarity=0.232 Sum_probs=143.5
Q ss_pred HhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-----
Q 010864 135 SRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----- 201 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----- 201 (498)
...|++++|+.+|++++++ +|..+.+++.+|.+|...|+ +++|+..|++++++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~ 77 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNK--------------YKEAAHLLNDALAIREKTL 77 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHHHHHHc
Confidence 3456777777777777763 26678899999999999999 99999999999998
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 202 ---CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 202 ---~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~-P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
+|....+++++|.++.. +|++++|++.|++|+..+++....+ |....+++++|.+|..+|++
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~---------- 143 (283)
T 3edt_B 78 GKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKA---------- 143 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH----------
T ss_pred CCcchHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCH----------
Confidence 36677899999999999 9999999988888888877766543 77889999999999999999
Q ss_pred HHHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCC
Q 010864 278 RTAISKFRAAIQL--------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 345 (498)
Q Consensus 278 ~~Ai~~~~~Al~l--------~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p 345 (498)
++|+.+|++++++ .|....++.++|.+|..+|+ +.+|..+|++++++.+
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGK-------------------YQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHH
Confidence 9999999999999 77778999999999999999 8999999999998743
No 88
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.64 E-value=2.7e-15 Score=161.04 Aligned_cols=135 Identities=17% Similarity=0.091 Sum_probs=128.2
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
.+..+|++++|+..|+++++++|+++.+++++|.+|..+|+ +++|+..|+++++++|++..+++++
T Consensus 32 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 32 AELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQR--------------HAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp HHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 36678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh---cCcchHHhhhhhHHHHHHHHHHHHH
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQEL---SAIVPAREKQTIVRTAISKFRAAIQ 289 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~---g~~~~a~~~~~~~~~Ai~~~~~Al~ 289 (498)
|.+|.. +|++++|+ ..|+++++++|++..++.++|.++..+ |++ ++|+..|+++++
T Consensus 98 a~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~----------~~A~~~~~~al~ 156 (568)
T 2vsy_A 98 GHALED----AGQAEAAA-------AAYTRAHQLLPEEPYITAQLLNWRRRLCDWRAL----------DVLSAQVRAAVA 156 (568)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTH----------HHHHHHHHHHHH
T ss_pred HHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhhccccH----------HHHHHHHHHHHh
Confidence 999999 99999999 699999999999999999999999999 888 999999999999
Q ss_pred hcCCCHHHHHHHH
Q 010864 290 LQFDFHRAIYNLG 302 (498)
Q Consensus 290 l~P~~~~a~~~Lg 302 (498)
.+|++...+..++
T Consensus 157 ~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 157 QGVGAVEPFAFLS 169 (568)
T ss_dssp HTCCCSCHHHHTT
T ss_pred cCCcccChHHHhC
Confidence 9999877776665
No 89
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.63 E-value=2.4e-15 Score=133.08 Aligned_cols=123 Identities=20% Similarity=0.326 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 230 EELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 230 ~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
+..|++|++.|+++++++|+++.+|+++|.++..+++++.+.+..+.+++|+..|++||+++|++..+|++||.+|..+|
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 44566677999999999999999999999999999999777777788899999999999999999999999999999987
Q ss_pred hhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcc
Q 010864 310 EDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVRSM 360 (498)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~~~ 360 (498)
.. .+......+.+.+|+.||++|++++|++..|..++.++..-
T Consensus 95 ~l--------~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka 137 (158)
T 1zu2_A 95 FL--------TPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKA 137 (158)
T ss_dssp HH--------CCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTH
T ss_pred cc--------CcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhC
Confidence 41 00000011349999999999999999999999999987654
No 90
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.63 E-value=2.9e-16 Score=164.63 Aligned_cols=140 Identities=14% Similarity=0.116 Sum_probs=130.7
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC----------
Q 010864 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---------- 205 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---------- 205 (498)
..+++++|+..|++++..+|+++.+|+++|.+|+.+|+ |++|+..|++|++++|++
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 311 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGK--------------YMQAVIQYGKIVSWLEMEYGLSEKESKA 311 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHTTCCSCCHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHHhcccccCChHHHHH
Confidence 45678889999999999999999999999999999999 999999999999999998
Q ss_pred -----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH
Q 010864 206 -----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 280 (498)
Q Consensus 206 -----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A 280 (498)
..+|+|+|.+|.. +|++++|+ .+|+++++++|++..+++++|.+|..+|++ ++|
T Consensus 312 ~~~~~~~~~~nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~~g~a~~~~g~~----------~~A 370 (457)
T 1kt0_A 312 SESFLLAAFLNLAMCYLK----LREYTKAV-------ECCDKALGLDSANEKGLYRRGEAQLLMNEF----------ESA 370 (457)
T ss_dssp HHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred HHHHHHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHhcCCccHHHHHHHHHHHHHccCH----------HHH
Confidence 7999999999999 99999999 699999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 281 ISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 281 i~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+.+|++|++++|++..++.+++.++..+++
T Consensus 371 ~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 371 KGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997
No 91
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.63 E-value=1.2e-14 Score=134.44 Aligned_cols=144 Identities=16% Similarity=0.188 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 237 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al 237 (498)
...++++|.++...|+ +++|+..|++++ +| ++.+++++|.++.. +|++++|+
T Consensus 6 ~~~~~~~g~~~~~~~~--------------~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~----~g~~~~A~------- 57 (213)
T 1hh8_A 6 AISLWNEGVLAADKKD--------------WKGALDAFSAVQ--DP-HSRICFNIGCMYTI----LKNMTEAE------- 57 (213)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHTSS--SC-CHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHhCC--------------HHHHHHHHHHHc--CC-ChHHHHHHHHHHHH----cCCHHHHH-------
Confidence 3457899999999999 999999999995 44 78999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH----------------HHHHHH
Q 010864 238 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH----------------RAIYNL 301 (498)
Q Consensus 238 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~----------------~a~~~L 301 (498)
..|+++++++|++..+++++|.+|..+|++ ++|+.+|++++++.|++. .+++++
T Consensus 58 ~~~~~al~~~~~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (213)
T 1hh8_A 58 KAFTRSINRDKHLAVAYFQRGMLYYQTEKY----------DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNI 127 (213)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHH
T ss_pred HHHHHHHHhCccchHHHHHHHHHHHHcccH----------HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHH
Confidence 689999999999999999999999999999 999999999999888766 999999
Q ss_pred HHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHH
Q 010864 302 GTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS--VYSSALRLVR 358 (498)
Q Consensus 302 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~--~~~~~l~~~~ 358 (498)
|.+|..+|+ +..|..+|+++++++|++. .+..++..++
T Consensus 128 ~~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~ 167 (213)
T 1hh8_A 128 AFMYAKKEE-------------------WKKAEEQLALATSMKSEPRHSKIDKAMECVW 167 (213)
T ss_dssp HHHHHHTTC-------------------HHHHHHHHHHHHTTCCSGGGGHHHHHHHHHH
T ss_pred HHHHHHccC-------------------HHHHHHHHHHHHHcCcccccchHHHHHHHHH
Confidence 999999999 9999999999999999765 5555555554
No 92
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.63 E-value=8.1e-15 Score=143.77 Aligned_cols=151 Identities=10% Similarity=0.012 Sum_probs=140.3
Q ss_pred hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 153 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 153 ~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
.-|++.+.++.+|..+...|+ +++|+..|+++++++|++..++++||.++.. +|++++|+
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~la~~~~~----~g~~~~A~-- 171 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESN--------------YTDALPLLXDAWQLSNQNGEIGLLLAETLIA----LNRSEDAE-- 171 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred HcCCchhhHHHHHHHHHhCCC--------------HHHHHHHHHHHHHhCCcchhHHHHHHHHHHH----CCCHHHHH--
Confidence 349999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010864 233 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 312 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~ 312 (498)
..|++++..+|+....+.+.+..+...++. ++|+..|+++++++|++..++++||.+|...|+
T Consensus 172 -----~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~----------~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~-- 234 (287)
T 3qou_A 172 -----AVLXTIPLQDQDTRYQGLVAQIELLXQAAD----------TPEIQQLQQQVAENPEDAALATQLALQLHQVGR-- 234 (287)
T ss_dssp -----HHHTTSCGGGCSHHHHHHHHHHHHHHHHTS----------CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--
T ss_pred -----HHHHhCchhhcchHHHHHHHHHHHHhhccc----------CccHHHHHHHHhcCCccHHHHHHHHHHHHHccc--
Confidence 699999999998888889999999999999 999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHH
Q 010864 313 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY--SVYSSALRLV 357 (498)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~--~~~~~~l~~~ 357 (498)
+.+|...|.++++.+|++ ......+..+
T Consensus 235 -----------------~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~ 264 (287)
T 3qou_A 235 -----------------NEEALELLFGHLRXDLTAADGQTRXTFQEI 264 (287)
T ss_dssp -----------------HHHHHHHHHHHHHHCTTGGGGHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHhcccccccchHHHHHHHH
Confidence 999999999999999998 5444444433
No 93
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.63 E-value=1e-15 Score=156.03 Aligned_cols=187 Identities=17% Similarity=0.150 Sum_probs=154.0
Q ss_pred hhcHHHHHHHHHHhhhcc--------------hhhHHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 010864 113 AEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQESA 172 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~--------------~~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g 172 (498)
.+++++|+..+.+++... +..+...|++++|+.+|++++++ +|....+++++|.+|..+|
T Consensus 61 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 140 (411)
T 4a1s_A 61 AGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG 140 (411)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC
Confidence 356666666666665543 23456789999999999999998 6778899999999999999
Q ss_pred CcCCCCCCCCchhhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHH
Q 010864 173 DNVSLDSTSPSKDALLEEACKKYDEATRL------CPTLHDAFYNWAIAISDRAKMRGR----------TKEAEELWKQA 236 (498)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------~p~~~~a~~~lg~~~~~~~~~~g~----------~~eA~~~~~~A 236 (498)
+ +++|+..|++++.+ .+....+++++|.+|.. +|+ +.+|...|++|
T Consensus 141 ~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 141 R--------------FDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA----KGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp C--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred C--------------HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH----cCcccccccchhhhhhhhHHHHHH
Confidence 9 99999999999999 56677899999999999 999 66666666666
Q ss_pred HHHHHHHHhcC------CCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH------HHHHHHHH
Q 010864 237 TKNYEKAVQLN------WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR------AIYNLGTV 304 (498)
Q Consensus 237 l~~~~~Al~l~------P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~------a~~~Lg~~ 304 (498)
+..|++++++. +....+++++|.+|..+|++ ++|+.+|++++++.++... +++++|.+
T Consensus 203 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 272 (411)
T 4a1s_A 203 VEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDF----------QAAIEHHQERLRIAREFGDRAAERRANSNLGNS 272 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 66776666543 44567999999999999999 9999999999998765433 89999999
Q ss_pred HHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 305 LYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 305 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
|..+|+ +.+|..+|++++.+.+.
T Consensus 273 ~~~~g~-------------------~~~A~~~~~~al~~~~~ 295 (411)
T 4a1s_A 273 HIFLGQ-------------------FEDAAEHYKRTLALAVE 295 (411)
T ss_dssp HHTTTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHCcC-------------------HHHHHHHHHHHHHHHHH
Confidence 999998 88888888888887764
No 94
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.63 E-value=2.2e-15 Score=153.08 Aligned_cols=166 Identities=17% Similarity=0.120 Sum_probs=142.2
Q ss_pred hHHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC--
Q 010864 133 GRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-- 204 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~-- 204 (498)
.+...|++++|+.+|++++.+ .+..+.+++++|.+|..+|+ +++|+..|++|+++.+.
T Consensus 112 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~~~~~ 177 (383)
T 3ulq_A 112 YELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQ--------------TYFSMDYARQAYEIYKEHE 177 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTCS
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHhCc
Confidence 356789999999999999987 23356899999999999999 99999999999999443
Q ss_pred -----CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHH
Q 010864 205 -----LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRT 279 (498)
Q Consensus 205 -----~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~ 279 (498)
.+.+++++|.+|.. +|++++|++.|++|+..+.+. ...+....+++++|.+|..+|++ ++
T Consensus 178 ~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~~g~~----------~~ 242 (383)
T 3ulq_A 178 AYNIRLLQCHSLFATNFLD----LKQYEDAISHFQKAYSMAEAE-KQPQLMGRTLYNIGLCKNSQSQY----------ED 242 (383)
T ss_dssp TTHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HH
T ss_pred cchHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHCCCH----------HH
Confidence 35689999999999 999999997777766665543 11223457899999999999999 99
Q ss_pred HHHHHHHHHHh-----c-CCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 280 AISKFRAAIQL-----Q-FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 280 Ai~~~~~Al~l-----~-P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
|+.+|++++++ + |....+++++|.+|..+|+ +.+|..+|++++++.+.
T Consensus 243 A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 243 AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGK-------------------IDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp HHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHHHH
Confidence 99999999994 5 8889999999999999999 99999999999998543
No 95
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.62 E-value=2.3e-14 Score=138.22 Aligned_cols=180 Identities=14% Similarity=0.142 Sum_probs=144.0
Q ss_pred hhcHHHHHHHHHHhhhcc--------hhhHHh----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCcCC
Q 010864 113 AEQNNAAMELINSVTGVD--------EEGRSR----QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADNVS 176 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~--------~~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~ 176 (498)
.+++++|+.++.++.... +..+.. .+++++|+..|+++++. +++.+++++|.+|.. .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~--- 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRD--- 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC---
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccC---
Confidence 466777888887776654 233455 78889999999998887 488889999999988 888
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 010864 177 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN 256 (498)
Q Consensus 177 ~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~ 256 (498)
+++|+.+|+++++++ +..+++++|.+|.......+++++|+ .+|+++++. +++.++++
T Consensus 130 -----------~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~-------~~~~~a~~~--~~~~a~~~ 187 (273)
T 1ouv_A 130 -----------FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKAL-------ASYDKACDL--KDSPGCFN 187 (273)
T ss_dssp -----------HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHH-------HHHHHHHHT--TCHHHHHH
T ss_pred -----------HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHH-------HHHHHHHHC--CCHHHHHH
Confidence 999999999998876 67888888888864111156777777 577777766 46888999
Q ss_pred HHHHHHH----hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhH
Q 010864 257 WGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNE 328 (498)
Q Consensus 257 lg~~l~~----~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~ 328 (498)
+|.+|.. .+++ ++|+.+|+++++..| +.++++||.+|.. .++
T Consensus 188 lg~~~~~g~~~~~~~----------~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~------------------ 237 (273)
T 1ouv_A 188 AGNMYHHGEGATKNF----------KEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRN------------------ 237 (273)
T ss_dssp HHHHHHHTCSSCCCH----------HHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCC------------------
T ss_pred HHHHHHcCCCCCccH----------HHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccC------------------
Confidence 9999998 8888 999999999999865 8899999999998 776
Q ss_pred HHHHHHHHHHHHHhcCCCHHHH
Q 010864 329 LYSQSAIYIAAAHALKPSYSVY 350 (498)
Q Consensus 329 ~~~~A~~~~~~Al~l~p~~~~~ 350 (498)
+.+|..+|++++++.|++...
T Consensus 238 -~~~A~~~~~~a~~~~~~~a~~ 258 (273)
T 1ouv_A 238 -EKQAIENFKKGCKLGAKGACD 258 (273)
T ss_dssp -STTHHHHHHHHHHHTCHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHH
Confidence 788999999999999976644
No 96
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=4.2e-15 Score=125.97 Aligned_cols=122 Identities=19% Similarity=0.159 Sum_probs=116.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 154 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 154 ~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
.|.+..+|+.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. .|++++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~la~~~~~----~~~~~~A~--- 70 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGD--------------YPQAMKHYTEAIKRNPKDAKLYSNRAACYTK----LLEFQLAL--- 70 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTC--------------SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT----TTCHHHHH---
T ss_pred CcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH----hccHHHHH---
Confidence 46778999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 234 KQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 234 ~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
..|+++++++|++..+++++|.++..+|++ ++|+.+|+++++++|++..++.+++.++..+|+
T Consensus 71 ----~~~~~a~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 71 ----KDCEECIQLEPTFIKGYTRKAAALEAMKDY----------TKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp ----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHhCCCchHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999 999999999999999999999999999988763
No 97
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.62 E-value=8.5e-14 Score=138.76 Aligned_cols=176 Identities=9% Similarity=0.040 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 010864 140 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDR 219 (498)
Q Consensus 140 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~ 219 (498)
+++++.++++++..+|.+..+|+.++.++..+++ ..+++++.++.++++++|.|..+|++.+.++..
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~------------~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~- 156 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE------------PNWARELELCARFLEADERNFHCWDYRRFVAAQ- 156 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSS------------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCc------------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-
Confidence 7899999999999999999999999999999883 018999999999999999999999999999999
Q ss_pred HHHcCC-HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchH----HhhhhhHHHHHHHHHHHHHhcCCC
Q 010864 220 AKMRGR-TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA----REKQTIVRTAISKFRAAIQLQFDF 294 (498)
Q Consensus 220 ~~~~g~-~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a----~~~~~~~~~Ai~~~~~Al~l~P~~ 294 (498)
.|+ +++++ .++.++++.+|.|..+|++++.++..++....+ ....+.++++++++.++|.++|++
T Consensus 157 ---l~~~~~eel-------~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 157 ---AAVAPAEEL-------AFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp ---TTCCHHHHH-------HHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred ---hCcCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 998 46666 799999999999999999999999988432110 111245699999999999999999
Q ss_pred HHHHHHHHHHHHHc-chhHHhccCCCCCCCCC--hhHHHHHHHHHHHHHHhcCCCHHH
Q 010864 295 HRAIYNLGTVLYGL-AEDTLRTGGTVNPREVS--PNELYSQSAIYIAAAHALKPSYSV 349 (498)
Q Consensus 295 ~~a~~~Lg~~~~~~-g~~~~~~~~~~~~~~~~--~~~~~~~A~~~~~~Al~l~p~~~~ 349 (498)
..+|+.+..++... |. ...+ ....+.+++.++.+++++.|++.-
T Consensus 227 ~SaW~Y~r~ll~~~~~~-----------~~~~~~~~~~l~~el~~~~elle~~pd~~w 273 (331)
T 3dss_A 227 QSAWFYHRWLLGAGSGR-----------CELSVEKSTVLQSELESCKELQELEPENKW 273 (331)
T ss_dssp HHHHHHHHHHHHSSSCG-----------GGCCHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhccCc-----------cccchHHHHHHHHHHHHHHHHHhhCcccch
Confidence 99998666655544 32 1111 124689999999999999999973
No 98
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.62 E-value=6.7e-14 Score=134.99 Aligned_cols=178 Identities=16% Similarity=0.139 Sum_probs=147.7
Q ss_pred hcHHHHHHHHHHhhhcc--------hhhHHh----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCcCCC
Q 010864 114 EQNNAAMELINSVTGVD--------EEGRSR----QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADNVSL 177 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~--------~~~~~~----~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~~ 177 (498)
+++++|+.++.++.... +..+.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .++
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~---- 93 (273)
T 1ouv_A 20 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQN---- 93 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC----
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccC----
Confidence 56677777777666533 233556 899999999999999985 89999999999999 888
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 010864 178 DSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNW 257 (498)
Q Consensus 178 ~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~l 257 (498)
+++|+..|+++++.+ +..+++++|.+|.......+++++|+ .+|+++++.+ +..+++++
T Consensus 94 ----------~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~-------~~~~~a~~~~--~~~a~~~l 152 (273)
T 1ouv_A 94 ----------TNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAV-------EYFTKACDLN--DGDGCTIL 152 (273)
T ss_dssp ----------HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHH-------HHHHHHHHTT--CHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHH-------HHHHHHHhcC--cHHHHHHH
Confidence 999999999999874 88999999999864111157888888 6777887765 78899999
Q ss_pred HHHHHH----hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhHH
Q 010864 258 GLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNEL 329 (498)
Q Consensus 258 g~~l~~----~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~ 329 (498)
|.+|.. .+++ ++|+.+|+++++. +++.+++++|.+|.. .++
T Consensus 153 g~~~~~~~~~~~~~----------~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~------------------- 201 (273)
T 1ouv_A 153 GSLYDAGRGTPKDL----------KKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKN------------------- 201 (273)
T ss_dssp HHHHHHTSSSCCCH----------HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCC-------------------
T ss_pred HHHHHcCCCCCCCH----------HHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCcc-------------------
Confidence 999998 8888 9999999999987 568999999999999 887
Q ss_pred HHHHHHHHHHHHhcCCCHHH
Q 010864 330 YSQSAIYIAAAHALKPSYSV 349 (498)
Q Consensus 330 ~~~A~~~~~~Al~l~p~~~~ 349 (498)
+.+|..+|+++++..+....
T Consensus 202 ~~~A~~~~~~a~~~~~~~a~ 221 (273)
T 1ouv_A 202 FKEALARYSKACELENGGGC 221 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH
Confidence 89999999999999874433
No 99
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.62 E-value=7.1e-15 Score=142.99 Aligned_cols=166 Identities=20% Similarity=0.249 Sum_probs=147.9
Q ss_pred HHhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh----
Q 010864 134 RSRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---- 201 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---- 201 (498)
+...|++++|+.+|++++++ +|....++..+|.+|...|+ +++|+..|++++.+
T Consensus 37 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 37 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNK--------------YKDAANLLNDALAIREKT 102 (311)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHHHHH
Confidence 56789999999999999995 67788999999999999999 99999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCcchHHhhhhh
Q 010864 202 ----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELSAIVPAREKQTI 276 (498)
Q Consensus 202 ----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~-P~~~~a~~~lg~~l~~~g~~~~a~~~~~~ 276 (498)
+|....+++++|.++.. .|++++|+..|++++..+++....+ |....+++++|.++...|++
T Consensus 103 ~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--------- 169 (311)
T 3nf1_A 103 LGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKY--------- 169 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH---------
T ss_pred hCCCChHHHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCH---------
Confidence 45677899999999999 9999999988888877776654333 56788999999999999999
Q ss_pred HHHHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 277 VRTAISKFRAAIQL--------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 277 ~~~Ai~~~~~Al~l--------~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
++|+.+|++++++ .|....+++++|.+|..+|+ +.+|..+|++++++.+.
T Consensus 170 -~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 170 -EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK-------------------FKQAETLYKEILTRAHE 227 (311)
T ss_dssp -HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 9999999999998 77778899999999999999 89999999999986443
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.62 E-value=2.9e-14 Score=125.72 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 237 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al 237 (498)
+..++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 13 ~~~~~~~a~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~----~~~~~~A~------- 67 (166)
T 1a17_A 13 AEELKTQANDYFKAKD--------------YENAIKFYSQAIELNPSNAIYYGNRSLAYLR----TECYGYAL------- 67 (166)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCCHHHHH-------
Confidence 5789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH--HHHcchhHHhc
Q 010864 238 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV--LYGLAEDTLRT 315 (498)
Q Consensus 238 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~--~~~~g~~~~~~ 315 (498)
..|+++++++|++..+++++|.++..+|++ ++|+.+|+++++++|++..++..++.+ +...|+
T Consensus 68 ~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~----- 132 (166)
T 1a17_A 68 GDATRAIELDKKYIKGYYRRAASNMALGKF----------RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKA----- 132 (166)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-----
Confidence 689999999999999999999999999999 999999999999999999998666655 777777
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 316 GGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 316 ~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
+.+|..++.++..
T Consensus 133 --------------~~~A~~~~~~~~~ 145 (166)
T 1a17_A 133 --------------FERAIAGDEHKRS 145 (166)
T ss_dssp --------------HHHHHHHHHHHHH
T ss_pred --------------HHHHHHcccchHH
Confidence 7888887776544
No 101
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.61 E-value=4e-14 Score=119.20 Aligned_cols=126 Identities=29% Similarity=0.351 Sum_probs=120.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++.+|.++...|+ +++|+..|++++..+|++..+++++|
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~l~ 76 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPRSAEAWYNLG 76 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.++.. .|++++|+ ..|++++..+|.+..++..+|.++...|++ ++|+.+|+++++++|+
T Consensus 77 ~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 77 NAYYK----QGDYDEAI-------EYYQKALELDPRSAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHT----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHSTT
T ss_pred HHHHH----hcCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHHccH----------HHHHHHHHHHHccCCC
Confidence 99999 99999999 688889999999999999999999999999 9999999999999986
Q ss_pred C
Q 010864 294 F 294 (498)
Q Consensus 294 ~ 294 (498)
.
T Consensus 136 ~ 136 (136)
T 2fo7_A 136 S 136 (136)
T ss_dssp C
T ss_pred C
Confidence 3
No 102
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.61 E-value=1.1e-14 Score=122.44 Aligned_cols=123 Identities=24% Similarity=0.248 Sum_probs=117.2
Q ss_pred hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 153 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 153 ~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
.+|.++.+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-- 66 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVEN--------------FEAAVHFYGKAIELNPANAVYFCNRAAAYSK----LGNYAGAV-- 66 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred cchhhhHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----hhchHHHH--
Confidence 446678899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 233 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
..|++++..+|++..+++++|.++..+|++ ++|+.+|+++++++|++..+++++|.++..+|+
T Consensus 67 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 67 -----QDCERAICIDPAYSKAYGRMGLALSSLNKH----------VEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp -----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHhcCccCHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999999 999999999999999999999999999998886
No 103
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.61 E-value=1.8e-14 Score=133.21 Aligned_cols=131 Identities=11% Similarity=0.118 Sum_probs=119.0
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++ +| ++.+++++|.+|..+|+ +++|+..|+++++++|++..+++++|
T Consensus 16 ~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~lg 78 (213)
T 1hh8_A 16 AADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKN--------------MTEAEKAFTRSINRDKHLAVAYFQRG 78 (213)
T ss_dssp HHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCccchHHHHHHH
Confidence 567899999999999996 44 78999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP----------------QALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~----------------~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
.++.. +|++++|+ ..|++++++.|++. .+++++|.++..+|++
T Consensus 79 ~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~---------- 137 (213)
T 1hh8_A 79 MLYYQ----TEKYDLAI-------KDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW---------- 137 (213)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH----------
T ss_pred HHHHH----cccHHHHH-------HHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH----------
Confidence 99999 99999999 68888998887766 9999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 278 RTAISKFRAAIQLQFDFHRAIYNLG 302 (498)
Q Consensus 278 ~~Ai~~~~~Al~l~P~~~~a~~~Lg 302 (498)
++|+.+|+++++++|++.......+
T Consensus 138 ~~A~~~~~~al~~~p~~~~~~~~~a 162 (213)
T 1hh8_A 138 KKAEEQLALATSMKSEPRHSKIDKA 162 (213)
T ss_dssp HHHHHHHHHHHTTCCSGGGGHHHHH
T ss_pred HHHHHHHHHHHHcCcccccchHHHH
Confidence 9999999999999998754444333
No 104
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.61 E-value=1.5e-15 Score=139.80 Aligned_cols=141 Identities=16% Similarity=0.084 Sum_probs=126.8
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH--------
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH-------- 206 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~-------- 206 (498)
...|.++++.+.+.......+..+..+..+|.+++..|+ |++|+..|++++.+.|++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~ 80 (198)
T 2fbn_A 15 ENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNE--------------INEAIVKYKEALDFFIHTEEWDDQILL 80 (198)
T ss_dssp -------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHTTTTCTTCCCHHHH
T ss_pred hhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHhcccccchhhHH
Confidence 446778888888887777777788999999999999999 9999999999999999887
Q ss_pred --------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHH
Q 010864 207 --------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 278 (498)
Q Consensus 207 --------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~ 278 (498)
.+++++|.++.. +|++++|+ .+|+++++++|++..+++++|.+|..+|++ +
T Consensus 81 ~~~~~~~~~~~~~la~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~~~~----------~ 139 (198)
T 2fbn_A 81 DKKKNIEISCNLNLATCYNK----NKDYPKAI-------DHASKVLKIDKNNVKALYKLGVANMYFGFL----------E 139 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHTCH----------H
T ss_pred HHHHHHHHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHHhCcccHHHHHHHHHHHHHcccH----------H
Confidence 899999999999 99999999 699999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 279 TAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 279 ~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+|+.+|+++++++|++..++.+++.++..+++
T Consensus 140 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 140 EAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887
No 105
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.61 E-value=1.2e-14 Score=128.51 Aligned_cols=114 Identities=23% Similarity=0.270 Sum_probs=95.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
..+.+.|++|+..|+++++++|+++++|+++|.++..+++.. ......+.+++|+..|++||+++|++..+|+++|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~----~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG 87 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFH----SISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccc----hhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHH
Confidence 346789999999999999999999999999999999998710 0001223357999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 251 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~ 251 (498)
.+|..+-+...++.++.+.|++|+.+|++|++++|++.
T Consensus 88 ~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 88 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 99998322234678888899999999999999999875
No 106
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.61 E-value=2.7e-15 Score=151.68 Aligned_cols=188 Identities=18% Similarity=0.200 Sum_probs=149.6
Q ss_pred hhcHHHHHHHHHHhhhcc--------------hhhHHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 010864 113 AEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQESA 172 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~--------------~~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g 172 (498)
.+++++|+..+.+++... +..+...|++++|+.+|++++.+ .|....++.++|.+|..+|
T Consensus 22 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 101 (406)
T 3sf4_A 22 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 101 (406)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcC
Confidence 355666666666555443 23466789999999999999887 4556789999999999999
Q ss_pred CcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCC-------------HHHHHHHH
Q 010864 173 DNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGR-------------TKEAEELW 233 (498)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~-------------~~eA~~~~ 233 (498)
+ +++|+..|++++.+.|.. ..+++++|.++.. .|+ +.++...|
T Consensus 102 ~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 102 N--------------FDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp C--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHTCC-------CCCCHHHHHHH
T ss_pred C--------------HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH----cCCcccccccchhhhhhhhHHHHH
Confidence 9 999999999999997653 5689999999999 999 55555555
Q ss_pred HHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH------HHHHHH
Q 010864 234 KQATKNYEKAVQL------NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH------RAIYNL 301 (498)
Q Consensus 234 ~~Al~~~~~Al~l------~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~------~a~~~L 301 (498)
++|+..|++++.+ .|....+++++|.++..+|++ ++|+.+|++++++.++.. .+++++
T Consensus 164 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 233 (406)
T 3sf4_A 164 QAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNF----------RDAVIAHEQRLLIAKEFGDKAAERRAYSNL 233 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 5555666666654 455678999999999999999 999999999999866553 389999
Q ss_pred HHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 302 GTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 302 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
|.+|..+|+ +.+|..+|.+++.+.+..
T Consensus 234 a~~~~~~g~-------------------~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 234 GNAYIFLGE-------------------FETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHTTC-------------------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCC-------------------hHHHHHHHHHHHHHHHhC
Confidence 999999998 788888888888776543
No 107
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.61 E-value=1.1e-14 Score=142.88 Aligned_cols=164 Identities=15% Similarity=0.048 Sum_probs=138.0
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC--
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYD------ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-- 205 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~------a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~-- 205 (498)
+...|++++|+..|++++...+.++. .++.+|.++...++ +++|+..|++++.+.+..
T Consensus 85 ~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~Ai~~~~~al~~~~~~~~ 150 (293)
T 3u3w_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD--------------YEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSC--------------HHHHHHHHHHHHHTCCCCSC
T ss_pred HHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccC--------------HHHHHHHHHHHHHHhccccc
Confidence 46689999999999999998887765 34468898888888 999999999999975442
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 206 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 206 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
..+++++|.+|.. +|++++|+..|++|+..+++.-...+....+++|+|.+|.++|++ ++|+
T Consensus 151 ~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y----------~~A~ 216 (293)
T 3u3w_A 151 VYQNLYIENAIANIYAE----NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY----------EESL 216 (293)
T ss_dssp TTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred HHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHH----------HHHH
Confidence 4479999999999 999999998888888766543233344567999999999999999 9999
Q ss_pred HHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhc
Q 010864 282 SKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 343 (498)
Q Consensus 282 ~~~~~Al~l~P~~------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 343 (498)
.+|++++++.++. +.+++++|.+|..+|+. +.+|..+|++|+.+
T Consensus 217 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~------------------~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 217 YQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE------------------EAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc------------------HHHHHHHHHHHHHH
Confidence 9999999986544 88999999999999941 58999999998865
No 108
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.60 E-value=1.2e-14 Score=124.52 Aligned_cols=110 Identities=21% Similarity=0.204 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 236 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 236 (498)
.+.++.++|.+++..|+ |++|+.+|++|++++|+++.+|+++|.+|.. +|++++|+
T Consensus 7 ~A~a~~~lG~~~~~~~~--------------~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~----~~~~~~A~------ 62 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKD--------------FEKAHVHYDKAIELDPSNITFYNNKAAVYFE----EKKFAECV------ 62 (127)
T ss_dssp HHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH------
T ss_pred HHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH----hhhHHHHH------
Confidence 46788999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCCCC-------HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 237 TKNYEKAVQLNWNS-------PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 302 (498)
Q Consensus 237 l~~~~~Al~l~P~~-------~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg 302 (498)
..|+++++++|++ ..+++++|.++..+|++ ++|+.+|+++++..|+ +.....|.
T Consensus 63 -~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~----------~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 63 -QFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDL----------SLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp -HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred -HHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 5777777777665 45788888888888888 9999999999999886 55554443
No 109
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.60 E-value=3.6e-15 Score=145.78 Aligned_cols=198 Identities=16% Similarity=0.160 Sum_probs=148.4
Q ss_pred hhcHHHHHHHHHHhhhcc--------------hhhHHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 010864 113 AEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQESA 172 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~--------------~~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g 172 (498)
.+++++|+..+.+++... +..+...|++++|+.+|++++.+ .+....++..+|.+|..+|
T Consensus 18 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 18 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 97 (338)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc
Confidence 355666666666655443 22356789999999999999987 4566789999999999999
Q ss_pred CcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCC-------------HHHHHHHH
Q 010864 173 DNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGR-------------TKEAEELW 233 (498)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~-------------~~eA~~~~ 233 (498)
+ +++|+..|++++++.+.. ..+++++|.++.. .|+ ..++.+.|
T Consensus 98 ~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~ 159 (338)
T 3ro2_A 98 N--------------FDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDTGEFPEDVRNAL 159 (338)
T ss_dssp C--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HHHTSSSSSCC----CCHHHHHHH
T ss_pred C--------------HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----cCcccccchhhhhhhhhhhHHHHH
Confidence 9 999999999999986543 4589999999999 999 44444445
Q ss_pred HHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCcchH------------------------------HhhhhhH
Q 010864 234 KQATKNYEKAVQL------NWNSPQALNNWGLALQELSAIVPA------------------------------REKQTIV 277 (498)
Q Consensus 234 ~~Al~~~~~Al~l------~P~~~~a~~~lg~~l~~~g~~~~a------------------------------~~~~~~~ 277 (498)
++|+..|++++.+ .+....++.++|.++...|++++| +...|++
T Consensus 160 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 239 (338)
T 3ro2_A 160 QAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 239 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH
Confidence 5555555555543 344567888999999999998665 2235677
Q ss_pred HHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 278 RTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 278 ~~Ai~~~~~Al~l~P~~------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
++|+.+|++++++.++. ..+++++|.++..+|+ +.+|..+|++++.+.+..
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~~ 296 (338)
T 3ro2_A 240 ETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQD-------------------YEKAIDYHLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcC-------------------HHHHHHHHHHHHHHHHhc
Confidence 88888888888776554 6677778888888887 888888888888876543
No 110
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.60 E-value=5.1e-14 Score=117.24 Aligned_cols=122 Identities=29% Similarity=0.365 Sum_probs=112.8
Q ss_pred hCCCC-HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 153 RNPED-YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 153 ~~P~~-~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
.+|.. ..+++.+|.++...|+ +++|+..|++++..+|++..+++++|.++.. .|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~- 63 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAI- 63 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred CCccccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH----hCCHHHHH-
Confidence 45665 7899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 232 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
..|++++..+|++..+++++|.++...|++ ++|+.+|+++++++|++..++.++|.++...|
T Consensus 64 ------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 64 ------EYYQKALELDPNNAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp ------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHhCCccHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 688889999999999999999999999999 99999999999999999999999999987654
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.59 E-value=5.9e-15 Score=133.40 Aligned_cols=139 Identities=7% Similarity=-0.055 Sum_probs=123.1
Q ss_pred CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 154 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 154 ~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
+|...+.++.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. .|++++|+
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~la~~~~~----~g~~~~A~--- 60 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGE--------------HAQALNVIQTLSDELQSRGDVKLAKADCLLE----TKQFELAQ--- 60 (176)
T ss_dssp ----CTTHHHHHHHHHHTTC--------------HHHHHHHHHTSCHHHHTSHHHHHHHHHHHHH----TTCHHHHH---
T ss_pred CCCHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH----CCCHHHHH---
Confidence 34555678999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010864 234 KQATKNYEKAVQLNWNSPQALNNWGLALQ-ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 312 (498)
Q Consensus 234 ~~Al~~~~~Al~l~P~~~~a~~~lg~~l~-~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~ 312 (498)
..|++++..+| ++..+..++.+.. ..+.. .+|+..|+++++++|+++.+++++|.++...|+
T Consensus 61 ----~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~----------~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~-- 123 (176)
T 2r5s_A 61 ----ELLATIPLEYQ-DNSYKSLIAKLELHQQAAE----------SPELKRLEQELAANPDNFELACELAVQYNQVGR-- 123 (176)
T ss_dssp ----HHHTTCCGGGC-CHHHHHHHHHHHHHHHHTS----------CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC--
T ss_pred ----HHHHHhhhccC-ChHHHHHHHHHHHHhhccc----------chHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc--
Confidence 69999999999 8888777775533 33444 568999999999999999999999999999999
Q ss_pred HhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 313 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
+.+|..+|.++++++|+.
T Consensus 124 -----------------~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 124 -----------------DEEALELLWNILKVNLGA 141 (176)
T ss_dssp -----------------HHHHHHHHHHHHTTCTTT
T ss_pred -----------------HHHHHHHHHHHHHhCccc
Confidence 999999999999999975
No 112
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.59 E-value=1.3e-13 Score=136.45 Aligned_cols=208 Identities=9% Similarity=0.006 Sum_probs=163.8
Q ss_pred HHHHHHHHHhhhcch----------hhHHhhc--cHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHh---cCcCCC
Q 010864 117 NAAMELINSVTGVDE----------EGRSRQR--ILTFAAKRYANAIERNPEDYDALYNWALVL----QES---ADNVSL 177 (498)
Q Consensus 117 ~~A~~~~~~~~~~~~----------~~~~~~g--~~~~A~~~~~~al~~~P~~~~a~~~lg~~~----~~~---g~~~~~ 177 (498)
++|+.+...++..+. ..+...+ ++++++.+++++|..+|++..+|+.++.++ ... ++
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~---- 125 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFD---- 125 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCC----
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCC----
Confidence 456777777766662 2334466 999999999999999999999999999999 555 45
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010864 178 DSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTK--EAEELWKQATKNYEKAVQLNWNSPQALN 255 (498)
Q Consensus 178 ~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~--eA~~~~~~Al~~~~~Al~l~P~~~~a~~ 255 (498)
+++++.++.++++++|++..+|++.+.++.. .|+++ +++ ..+.++++.+|.|..+|+
T Consensus 126 ----------~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~----l~~~~~~~EL-------~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 126 ----------PYREFDILEAMLSSDPKNHHVWSYRKWLVDT----FDLHNDAKEL-------SFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp ----------THHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCTTCHHHH-------HHHHHHHHHCTTCHHHHH
T ss_pred ----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcccChHHHH-------HHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999999999 99887 766 799999999999999999
Q ss_pred HHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhcc------CCCC-CCCCCh--
Q 010864 256 NWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTG------GTVN-PREVSP-- 326 (498)
Q Consensus 256 ~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~------~~~~-~~~~~~-- 326 (498)
+++.++..+++. .....+++++++++++|.++|++..+|++++.++...|+...... ..+. ....++
T Consensus 185 ~R~~ll~~l~~~----~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 260 (306)
T 3dra_A 185 HRFFLLFSKKHL----ATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFA 260 (306)
T ss_dssp HHHHHHHSSGGG----CCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHH
T ss_pred HHHHHHHhcccc----chhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHH
Confidence 999999998871 011123999999999999999999999999999999886321110 0011 000011
Q ss_pred ----------hHHHHHHHHHHHHHHh-cCCCHHHHHHH
Q 010864 327 ----------NELYSQSAIYIAAAHA-LKPSYSVYSSA 353 (498)
Q Consensus 327 ----------~~~~~~A~~~~~~Al~-l~p~~~~~~~~ 353 (498)
.+...+|..+|.++.+ +||-+..|..-
T Consensus 261 l~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~ 298 (306)
T 3dra_A 261 LETLAKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDY 298 (306)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHhccChHHHHHHHH
Confidence 1124678888888886 78888866553
No 113
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.59 E-value=2e-13 Score=136.03 Aligned_cols=194 Identities=11% Similarity=0.019 Sum_probs=156.8
Q ss_pred hccHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010864 137 QRILT-FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 215 (498)
Q Consensus 137 ~g~~~-~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~ 215 (498)
.|.++ +|+.++.++|.++|++..+|+.++.++..++.... .......+++++.++.+++..+|++..+|+..+.+
T Consensus 42 ~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~----~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wl 117 (331)
T 3dss_A 42 AGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKS----PEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 117 (331)
T ss_dssp TTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhccccc----chhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 44554 79999999999999999999999999998875100 00112347999999999999999999999999999
Q ss_pred HHHHHHHcCC--HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC-cchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 216 ISDRAKMRGR--TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA-IVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 216 ~~~~~~~~g~--~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~-~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
+.. .|+ +++++ .++.++++.+|.|..+|++.+.++...|. + ++++.++.++|+.+|
T Consensus 118 L~~----l~~~~~~~EL-------~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~----------~eel~~~~~~I~~~p 176 (331)
T 3dss_A 118 LSR----LPEPNWAREL-------ELCARFLEADERNFHCWDYRRFVAAQAAVAP----------AEELAFTDSLITRNF 176 (331)
T ss_dssp HHH----CSSCCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH----------HHHHHHHHHHHHHCS
T ss_pred Hhc----cCcccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhCcCH----------HHHHHHHHHHHHHCC
Confidence 999 885 66666 79999999999999999999999999998 5 899999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHcc
Q 010864 293 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSS-ALRLVRSM 360 (498)
Q Consensus 293 ~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~-~l~~~~~~ 360 (498)
.+..+|++++.++..+...... .+........+.++++++.+++.++|++..... ...++...
T Consensus 177 ~N~SAW~~R~~ll~~l~~~~~~-----~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~ 240 (331)
T 3dss_A 177 SNYSSWHYRSCLLPQLHPQPDS-----GPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAG 240 (331)
T ss_dssp CCHHHHHHHHHHHHHHSCCC-----------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHhhhcccc-----ccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 9999999999999988531100 001112345689999999999999999995443 33444443
No 114
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.59 E-value=2.7e-14 Score=122.39 Aligned_cols=124 Identities=17% Similarity=0.085 Sum_probs=113.6
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 152 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 152 ~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
..+|.++..++.+|.+++..|+ +++|+..|++++.++|++..+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~~~~~~A~- 63 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRK--------------YPEAAACYGRAITRNPLVAVYYTNRALCYLK----MQQPEQAL- 63 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred CCccccHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH----hcCHHHHH-
Confidence 4578899999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHH
Q 010864 232 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-----FHRAIYNLGTVLY 306 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~-----~~~a~~~Lg~~~~ 306 (498)
..|+++++++|+++.+++++|.++..+|++ ++|+.+|+++++++|+ +..+...+..+..
T Consensus 64 ------~~~~~al~~~p~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 64 ------ADCRRALELDGQSVKAHFFLGQCQLEMESY----------DEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp ------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred ------HHHHHHHHhCchhHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999 9999999999999998 7788888877766
Q ss_pred Hcch
Q 010864 307 GLAE 310 (498)
Q Consensus 307 ~~g~ 310 (498)
....
T Consensus 128 ~~~~ 131 (137)
T 3q49_B 128 KRWN 131 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 115
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.2e-14 Score=121.74 Aligned_cols=116 Identities=17% Similarity=0.119 Sum_probs=107.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHH
Q 010864 203 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAIS 282 (498)
Q Consensus 203 p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~ 282 (498)
|..+..++++|..+.. .|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|+.
T Consensus 1 p~~a~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~a~~~~~~~~~----------~~A~~ 59 (126)
T 3upv_A 1 SMKAEEARLEGKEYFT----KSDWPNAV-------KAYTEMIKRAPEDARGYSNRAAALAKLMSF----------PEAIA 59 (126)
T ss_dssp CHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHH
T ss_pred CchHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHhcCH----------HHHHH
Confidence 3456789999999999 99999999 699999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC------CCHHHHHHHHHH
Q 010864 283 KFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK------PSYSVYSSALRL 356 (498)
Q Consensus 283 ~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~------p~~~~~~~~l~~ 356 (498)
.|+++++++|++..+++++|.++..+|+ +.+|..+|+++++++ |++......+..
T Consensus 60 ~~~~al~~~p~~~~~~~~lg~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~ 120 (126)
T 3upv_A 60 DCNKAIEKDPNFVRAYIRKATAQIAVKE-------------------YASALETLDAARTKDAEVNNGSSAREIDQLYYK 120 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHhC-------------------HHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999 888877766665
Q ss_pred HH
Q 010864 357 VR 358 (498)
Q Consensus 357 ~~ 358 (498)
+.
T Consensus 121 ~~ 122 (126)
T 3upv_A 121 AS 122 (126)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 116
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.58 E-value=1.3e-14 Score=147.24 Aligned_cols=165 Identities=12% Similarity=0.021 Sum_probs=142.6
Q ss_pred HHhhccHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC---
Q 010864 134 RSRQRILTFAAKRYANAIERN------PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT--- 204 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~------P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~--- 204 (498)
+...|++++|+..|++++.+. +..+.+++++|.+|..+|+ +++|+..|++|+.+.+.
T Consensus 111 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~--------------~~~A~~~~~~al~~~~~~~~ 176 (378)
T 3q15_A 111 EFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQ--------------THVSMYHILQALDIYQNHPL 176 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCC--------------cHHHHHHHHHHHHHHHhCCC
Confidence 567899999999999999874 2356799999999999999 99999999999998443
Q ss_pred ----CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH
Q 010864 205 ----LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 280 (498)
Q Consensus 205 ----~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A 280 (498)
.+.+++++|.+|.. +|++++|++.|++|+..+++. ...+....+++++|.+|..+|++ ++|
T Consensus 177 ~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~~~~~----------~~A 241 (378)
T 3q15_A 177 YSIRTIQSLFVIAGNYDD----FKHYDKALPHLEAALELAMDI-QNDRFIAISLLNIANSYDRSGDD----------QMA 241 (378)
T ss_dssp CHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTCH----------HHH
T ss_pred chhhHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHCCCH----------HHH
Confidence 35689999999999 999999998777777666432 11123467899999999999999 999
Q ss_pred HHHHHHHHH-----hcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 281 ISKFRAAIQ-----LQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 281 i~~~~~Al~-----l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
+.+|+++++ .+|....+++++|.+|..+|+ +.+|..++++++++.+.
T Consensus 242 ~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 242 VEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQ-------------------TQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHHHH
Confidence 999999999 688889999999999999999 99999999999998554
No 117
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.58 E-value=1.4e-14 Score=147.18 Aligned_cols=169 Identities=14% Similarity=0.093 Sum_probs=134.2
Q ss_pred hhhcHHHHHHHHHHhhhcc----------------hhhHHhhccHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHH
Q 010864 112 LAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPE-------DYDALYNWALVL 168 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~~~~A~~~~~~al~~~P~-------~~~a~~~lg~~~ 168 (498)
..+++++|+..+.+++... +..+...|++++|+.+|++++++.+. .+.+++++|.+|
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 194 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNF 194 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 4578888988888887652 33467789999999999999998543 356899999999
Q ss_pred HHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 010864 169 QESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK 242 (498)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~ 242 (498)
..+|+ +++|+..|++++++.+.. ..+++++|.+|.. +|++++|+..|++|+..+++
T Consensus 195 ~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 195 LDLKQ--------------YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS----QSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHTTC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH
T ss_pred HHhcC--------------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHh
Confidence 99999 999999999999985543 3589999999999 99999999655555555443
Q ss_pred HHhcC-CCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHcch
Q 010864 243 AVQLN-WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ-----FDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 243 Al~l~-P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~-----P~~~~a~~~Lg~~~~~~g~ 310 (498)
. .+ |....+++++|.++..+|++ ++|+.+|++++++. |.....+.++|.++...|+
T Consensus 257 ~--~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~ 318 (383)
T 3ulq_A 257 S--NILPSLPQAYFLITQIHYKLGKI----------DKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPD 318 (383)
T ss_dssp T--TCGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCC
T ss_pred h--ccchhHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCc
Confidence 1 35 77899999999999999999 88888888888873 3333335556666666664
No 118
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.58 E-value=9.6e-15 Score=148.81 Aligned_cols=173 Identities=14% Similarity=0.071 Sum_probs=147.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh------CC
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY----DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------CP 203 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~----~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------~p 203 (498)
+...|++++|+.+|+++++++|++. .+++.+|.+|...|+ +++|+..|++++++ .|
T Consensus 58 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 58 LCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGD--------------YNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHHHHccCch
Confidence 5778999999999999999999987 589999999999999 99999999999998 57
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC----------cchHHhh
Q 010864 204 TLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA----------IVPAREK 273 (498)
Q Consensus 204 ~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~----------~~~a~~~ 273 (498)
....+++++|.+|.. +|++++|+..|++++..+.+. ...|....+++++|.+|..+|+ + .+.
T Consensus 124 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~---~~a 195 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKV----MGRFDEAAICCERHLTLARQL-GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFG---DDV 195 (411)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC---HHH
T ss_pred HHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHcCcccccccchhhh---hhh
Confidence 788999999999999 999999998777777766553 2245678899999999999999 1 111
Q ss_pred hhhHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 274 QTIVRTAISKFRAAIQLQ------FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 274 ~~~~~~Ai~~~~~Al~l~------P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
...+++|+.+|++++++. +....+++++|.+|..+|+ +.+|..+|++++++.+..
T Consensus 196 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~~ 256 (411)
T 4a1s_A 196 KEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGD-------------------FQAAIEHHQERLRIAREF 256 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-------------------hHHHHHHHHHHHHHHHhc
Confidence 111299999999999873 4456799999999999999 899999999999987754
No 119
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.57 E-value=2.3e-14 Score=127.39 Aligned_cols=119 Identities=17% Similarity=0.060 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------------------CPTLHDAFYNWAIAISD 218 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------------------~p~~~~a~~~lg~~~~~ 218 (498)
.+..+..+|..++..|+ |++|+..|++++.+ +|.+..+|+++|.+|..
T Consensus 10 ~a~~~~~~G~~~~~~~~--------------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 75 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKD--------------YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN 75 (162)
T ss_dssp HHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35778999999999999 99999999999999 77788999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH-HH
Q 010864 219 RAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH-RA 297 (498)
Q Consensus 219 ~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~-~a 297 (498)
+|++++|+ ..|+++++++|+++.+++++|.+|..+|++ ++|+..|+++++++|++. .+
T Consensus 76 ----~~~~~~A~-------~~~~~al~~~p~~~~a~~~~g~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~ 134 (162)
T 3rkv_A 76 ----IGDLHEAE-------ETSSEVLKREETNEKALFRRAKARIAAWKL----------DEAEEDLKLLLRNHPAAASVV 134 (162)
T ss_dssp ----HTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCGGGHHHH
T ss_pred ----cCcHHHHH-------HHHHHHHhcCCcchHHHHHHHHHHHHHhcH----------HHHHHHHHHHHhcCCCCHHHH
Confidence 99999999 699999999999999999999999999999 999999999999999999 77
Q ss_pred HHHHHHHHHHcch
Q 010864 298 IYNLGTVLYGLAE 310 (498)
Q Consensus 298 ~~~Lg~~~~~~g~ 310 (498)
...|+.+...+.+
T Consensus 135 ~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 135 AREMKIVTERRAE 147 (162)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877665
No 120
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.57 E-value=3.4e-14 Score=127.93 Aligned_cols=130 Identities=12% Similarity=0.055 Sum_probs=116.5
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH-
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA- 260 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~- 260 (498)
+...+++++|+..|+++++.+|++..+++.+|.++.. .|++++|+ ..|+++++++|++..+++++|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~l 88 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLW----QNDYSNSL-------LAYRQALQLRGENAELYAALATVL 88 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4456779999999999999999999999999999999 99999999 69999999999999999999999
Q ss_pred HHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHH
Q 010864 261 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAA 340 (498)
Q Consensus 261 l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 340 (498)
+...|++ ..++|+.+|+++++++|++..+++++|.+|..+|+ +.+|..+|.++
T Consensus 89 ~~~~~~~--------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a 141 (177)
T 2e2e_A 89 YYQASQH--------MTAQTRAMIDKALALDSNEITALMLLASDAFMQAN-------------------YAQAIELWQKV 141 (177)
T ss_dssp HHHTTTC--------CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHH
T ss_pred HHhcCCc--------chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccc-------------------HHHHHHHHHHH
Confidence 7788872 11899999999999999999999999999999999 99999999999
Q ss_pred HhcCCCHHH
Q 010864 341 HALKPSYSV 349 (498)
Q Consensus 341 l~l~p~~~~ 349 (498)
++++|++..
T Consensus 142 l~~~p~~~~ 150 (177)
T 2e2e_A 142 MDLNSPRIN 150 (177)
T ss_dssp HHTCCTTSC
T ss_pred HhhCCCCcc
Confidence 999998863
No 121
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.57 E-value=1.2e-13 Score=135.25 Aligned_cols=160 Identities=16% Similarity=0.052 Sum_probs=135.7
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC--
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-- 205 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~------~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~-- 205 (498)
+...|++++|+..|.++++..+... ..++.+|.++...|+ +++|+..|++++.+.+..
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD--------------YEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSC--------------HHHHHHHHHHHHTTCCCSSC
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCC--------------HHHHHHHHHHHHHHHhcCCc
Confidence 5678999999999999999988765 346788999999999 999999999999886553
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 206 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS----PQALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 206 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~----~~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
..+++++|.+|.. +|++++|+..|++|+..++ ..|++ ..+++|+|.+|..+|++
T Consensus 151 ~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~kal~~~~----~~~~~~~~~~~~~~nlg~~y~~~~~y---------- 212 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAE----NGYLKKGIDLFEQILKQLE----ALHDNEEFDVKVRYNHAKALYLDSRY---------- 212 (293)
T ss_dssp TTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHTTCH----------
T ss_pred hHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHH----hcCccccchHHHHHhHHHHHHHHhhH----------
Confidence 6799999999999 9999999976666665554 34443 37999999999999999
Q ss_pred HHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHH-HHHHHHHHhcC
Q 010864 278 RTAISKFRAAIQLQFD------FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQS-AIYIAAAHALK 344 (498)
Q Consensus 278 ~~Ai~~~~~Al~l~P~------~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A-~~~~~~Al~l~ 344 (498)
++|+.+|++++++.++ ...+++++|.+|..+|+ +.+| ..+|++|+.+.
T Consensus 213 ~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~-------------------~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY-------------------EEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTC-------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCC-------------------cHHHHHHHHHHHHHHH
Confidence 9999999999998643 27899999999999998 7888 77888888653
No 122
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.57 E-value=1.9e-14 Score=145.50 Aligned_cols=187 Identities=13% Similarity=0.092 Sum_probs=150.3
Q ss_pred hhhcHHHHHHHHHHhhhcc----------------hhhHHhhcc--------------------HHHHHHHHHHHHHh--
Q 010864 112 LAEQNNAAMELINSVTGVD----------------EEGRSRQRI--------------------LTFAAKRYANAIER-- 153 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~--------------------~~~A~~~~~~al~~-- 153 (498)
..+++++|+..+.+++... +..+...|+ +++|+..|++++.+
T Consensus 99 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 178 (406)
T 3sf4_A 99 VLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT 178 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3467777777777666543 234566788 99999999999887
Q ss_pred ----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHHHHc
Q 010864 154 ----NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH------DAFYNWAIAISDRAKMR 223 (498)
Q Consensus 154 ----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~------~a~~~lg~~~~~~~~~~ 223 (498)
.+....++.++|.+|..+|+ +++|+..|++++++.+... .+++++|.++.. +
T Consensus 179 ~~~~~~~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~ 240 (406)
T 3sf4_A 179 ALGDRAAQGRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF----L 240 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTB--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----T
T ss_pred hccCcHHHHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----c
Confidence 34556789999999999999 9999999999999966543 389999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCC------HHH
Q 010864 224 GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRA 297 (498)
Q Consensus 224 g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~------~~a 297 (498)
|++++|+..|++++..+.+. ...+....+++++|.+|...|++ ++|+.+|++++++.+.. ..+
T Consensus 241 g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~ 309 (406)
T 3sf4_A 241 GEFETASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELNDRIGEGRA 309 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhC-cCchHHHHHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 99999996555555444321 00111278899999999999999 99999999999986554 778
Q ss_pred HHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 298 IYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 298 ~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
+.++|.+|..+|+ +.+|..+|++++++.+.
T Consensus 310 ~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 339 (406)
T 3sf4_A 310 CWSLGNAYTALGN-------------------HDQAMHFAEKHLEISRE 339 (406)
T ss_dssp HHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999988543
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.57 E-value=1.6e-13 Score=120.90 Aligned_cols=122 Identities=20% Similarity=0.160 Sum_probs=113.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++++|.++...|+ +++|+..|+++++++|++..+++++|
T Consensus 23 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 23 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTEC--------------YGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 5778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA--LQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~--l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
.++.. +|++++|+ ..|+++++++|++..++.+++.+ +...|++ ++|+..++++..+
T Consensus 89 ~~~~~----~~~~~~A~-------~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~~ 146 (166)
T 1a17_A 89 ASNMA----LGKFRAAL-------RDYETVVKVKPHDKDAKMKYQECNKIVKQKAF----------ERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHH
T ss_pred HHHHH----hccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHcccchHHH
Confidence 99999 99999999 69999999999999998666655 7777888 9999999988765
No 124
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.57 E-value=2.4e-14 Score=121.70 Aligned_cols=102 Identities=14% Similarity=0.142 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010864 160 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 239 (498)
Q Consensus 160 a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~ 239 (498)
.++.+|.++...|+ +++|+..|+++++++|++..+|+++|.++.. +|++++|+ ..
T Consensus 19 ~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~A~-------~~ 73 (121)
T 1hxi_A 19 NPMEEGLSMLKLAN--------------LAEAALAFEAVCQKEPEREEAWRSLGLTQAE----NEKDGLAI-------IA 73 (121)
T ss_dssp CHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------HH
T ss_pred hHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----cCCHHHHH-------HH
Confidence 47899999999999 9999999999999999999999999999999 99999999 79
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH
Q 010864 240 YEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 240 ~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~ 296 (498)
|+++++++|++..+++++|.+|..+|++ ++|+..|+++++++|++..
T Consensus 74 ~~~al~l~P~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 74 LNHARMLDPKDIAVHAALAVSHTNEHNA----------NAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHC-------
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999 9999999999999998754
No 125
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.56 E-value=5.6e-14 Score=120.35 Aligned_cols=106 Identities=13% Similarity=0.080 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHH
Q 010864 205 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 284 (498)
Q Consensus 205 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~ 284 (498)
.+.++.+||.++.. .|++++|+ .+|++|++++|+++.+++++|.+|..+|++ ++|+..|
T Consensus 7 ~A~a~~~lG~~~~~----~~~~~~A~-------~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~----------~~A~~~~ 65 (127)
T 4gcn_A 7 AAIAEKDLGNAAYK----QKDFEKAH-------VHYDKAIELDPSNITFYNNKAAVYFEEKKF----------AECVQFC 65 (127)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHhHHHHHHHhhhH----------HHHHHHH
Confidence 45688999999999 99999999 699999999999999999999999999999 9999999
Q ss_pred HHHHHhcCCC-------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHH
Q 010864 285 RAAIQLQFDF-------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 350 (498)
Q Consensus 285 ~~Al~l~P~~-------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~ 350 (498)
+++++++|++ +.+++++|.++..+|+ +..|+.+|++++.+.|+....
T Consensus 66 ~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~-------------------~~~A~~~~~kal~~~~~~~~~ 119 (127)
T 4gcn_A 66 EKAVEVGRETRADYKLIAKAMSRAGNAFQKQND-------------------LSLAVQWFHRSLSEFRDPELV 119 (127)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHhCcccchhhHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHhhCcCHHHH
Confidence 9999998876 3578888888888888 999999999999999976543
No 126
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.56 E-value=1.2e-13 Score=138.74 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=115.0
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPED---------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDE 197 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~ 197 (498)
.+..+|++++|+.+|++++.++|++ ..+|+++|.+|..+|+ +++|+.+|++
T Consensus 156 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~~~~ 221 (336)
T 1p5q_A 156 VYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA--------------FSAAIESCNK 221 (336)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHH
Confidence 3678999999999999999999999 6999999999999999 9999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 198 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 198 Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
+++++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++.++|.++..+|++
T Consensus 222 al~~~p~~~~a~~~lg~~~~~----~g~~~~A~-------~~~~~al~l~P~~~~a~~~l~~~~~~~~~~---------- 280 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLA----VNDFELAR-------ADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ---------- 280 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSSCHHHHHHHHHHHHHHHHH----------
T ss_pred HHHhCCCcHHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHH----------
Confidence 999999999999999999999 99999999 699999999999999999999999999999
Q ss_pred HHH-HHHHHHHHHh
Q 010864 278 RTA-ISKFRAAIQL 290 (498)
Q Consensus 278 ~~A-i~~~~~Al~l 290 (498)
++| ...|++++..
T Consensus 281 ~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 281 LAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 877 5567776643
No 127
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.56 E-value=1.4e-13 Score=113.59 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=109.0
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 236 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 236 (498)
.+..++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~------ 58 (118)
T 1elw_A 3 QVNELKEKGNKALSVGN--------------IDDALQCYSEAIKLDPHNHVLYSNRSAAYAK----KGDYQKAY------ 58 (118)
T ss_dssp HHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH------
T ss_pred hHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh----hccHHHHH------
Confidence 46789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 237 TKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305 (498)
Q Consensus 237 l~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~ 305 (498)
..|+++++.+|++..+++++|.++..+|++ ++|+.+|+++++++|++..++.+++.+.
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 59 -EDGCKTVDLKPDWGKGYSRKAAALEFLNRF----------EEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp -HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred -HHHHHHHHhCcccHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 689999999999999999999999999999 9999999999999999999999998875
No 128
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=6.4e-14 Score=130.97 Aligned_cols=165 Identities=14% Similarity=-0.033 Sum_probs=134.9
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc----CcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA----DNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 209 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g----~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~ 209 (498)
+...+++++|+.+|+++++. +++.+++++|.+|.. + + +++|+.+|++++ +++++.++
T Consensus 28 ~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~--------------~~~A~~~~~~A~--~~g~~~a~ 88 (212)
T 3rjv_A 28 WVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQAD--------------YPQARQLAEKAV--EAGSKSGE 88 (212)
T ss_dssp HHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCC--------------HHHHHHHHHHHH--HTTCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCC--------------HHHHHHHHHHHH--HCCCHHHH
Confidence 45589999999999999875 689999999999988 6 6 999999999995 56899999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH----hcCcchHHhhhhhHHHHHHH
Q 010864 210 YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW--NSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 210 ~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P--~~~~a~~~lg~~l~~----~g~~~~a~~~~~~~~~Ai~~ 283 (498)
++||.+|.......+++++|+ .+|+++++..+ +++.++++||.+|.. .+++ ++|+.+
T Consensus 89 ~~Lg~~y~~g~g~~~d~~~A~-------~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~----------~~A~~~ 151 (212)
T 3rjv_A 89 IVLARVLVNRQAGATDVAHAI-------TLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD----------VKASEY 151 (212)
T ss_dssp HHHHHHHTCGGGSSCCHHHHH-------HHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH----------HHHHHH
T ss_pred HHHHHHHHcCCCCccCHHHHH-------HHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH----------HHHHHH
Confidence 999999963111135777777 79999999988 469999999999998 6677 999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 284 FRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 284 ~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
|++|+++ +.++.++++||.+|...... .....+.+|..+|+++.+......
T Consensus 152 ~~~A~~~-~~~~~a~~~Lg~~y~~g~gg-------------~~~~d~~~A~~~~~~A~~~g~~~A 202 (212)
T 3rjv_A 152 FKGSSSL-SRTGYAEYWAGMMFQQGEKG-------------FIEPNKQKALHWLNVSCLEGFDTG 202 (212)
T ss_dssp HHHHHHT-SCTTHHHHHHHHHHHHCBTT-------------TBCCCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHcCCCC-------------CCCCCHHHHHHHHHHHHHcCCHHH
Confidence 9999999 77888999999999764200 000017899999999999865443
No 129
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.55 E-value=3.8e-14 Score=138.57 Aligned_cols=165 Identities=14% Similarity=0.033 Sum_probs=126.3
Q ss_pred CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010864 155 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 234 (498)
Q Consensus 155 P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~ 234 (498)
|.++.+++.+|.+++..|+ +++|+..|+++++++|++..+++++|.+|.. +|++++|+
T Consensus 1 p~~a~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~A~---- 58 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRK--------------YPEAAACYGRAITRNPLVAVYYTNRALCYLK----MQQPEQAL---- 58 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCHHHHH----
T ss_pred ChhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hcCHHHHH----
Confidence 6788999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHH-
Q 010864 235 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTL- 313 (498)
Q Consensus 235 ~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~- 313 (498)
..|+++++++|++..+++++|.+|..+|++ ++|+..|+++++++|++...+..+........+...
T Consensus 59 ---~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~ 125 (281)
T 2c2l_A 59 ---ADCRRALELDGQSVKAHFFLGQCQLEMESY----------DEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 125 (281)
T ss_dssp ---HHHHHHTTSCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999 999999999999999763222211111111111000
Q ss_pred -hccCCCCCCCCC--------hhHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 314 -RTGGTVNPREVS--------PNELYSQSAIYIAAAHALKPSYSVYSSAL 354 (498)
Q Consensus 314 -~~~~~~~~~~~~--------~~~~~~~A~~~~~~Al~l~p~~~~~~~~l 354 (498)
.........+.. ....+.+|+..|.++++++|++......+
T Consensus 126 ~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~~~~~~~l 175 (281)
T 2c2l_A 126 NSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQ 175 (281)
T ss_dssp HHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCHHHHTHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhHH
Confidence 000000101110 11246788888889999999887444443
No 130
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=1.1e-13 Score=130.34 Aligned_cols=150 Identities=12% Similarity=0.097 Sum_probs=128.4
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---HDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
.+.+++++|..++..|+ +++|+..|+++++..|++ ..+++++|.+|.. +|++++|+
T Consensus 3 ~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~--- 61 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGN--------------WRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK----NADLPLAQ--- 61 (225)
T ss_dssp CHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH----TTCHHHHH---
T ss_pred CHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh----cCCHHHHH---
Confidence 56889999999999999 999999999999999986 4799999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHhcCc--------chHHhhhhhHHHHHHHHHHHHHhcCCCHHHH----
Q 010864 234 KQATKNYEKAVQLNWNSPQ---ALNNWGLALQELSAI--------VPAREKQTIVRTAISKFRAAIQLQFDFHRAI---- 298 (498)
Q Consensus 234 ~~Al~~~~~Al~l~P~~~~---a~~~lg~~l~~~g~~--------~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~---- 298 (498)
..|+++++.+|++.. +++++|.++..+|.. .......|++++|+..|+++++..|++..++
T Consensus 62 ----~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~ 137 (225)
T 2yhc_A 62 ----AAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATK 137 (225)
T ss_dssp ----HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHH
T ss_pred ----HHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHH
Confidence 699999999999864 899999999876421 1113345677999999999999999987554
Q ss_pred -------------HHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHH
Q 010864 299 -------------YNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 350 (498)
Q Consensus 299 -------------~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~ 350 (498)
+.+|.+|+..|+ +..|+.+|+++++..|+++..
T Consensus 138 ~l~~~~~~~~~~~~~~a~~~~~~~~-------------------~~~A~~~~~~~l~~~p~~~~~ 183 (225)
T 2yhc_A 138 RLVFLKDRLAKYEYSVAEYYTERGA-------------------WVAVVNRVEGMLRDYPDTQAT 183 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCc-------------------HHHHHHHHHHHHHHCcCCCcc
Confidence 577888888888 999999999999999998743
No 131
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.54 E-value=5.1e-14 Score=125.43 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=107.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 202 CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 202 ~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
++.++..++++|.++.. .|++++|+ ..|+++++++|+++.+++++|.+|..+|++ ++|+
T Consensus 7 ~~~~a~~~~~~g~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~~~g~~----------~~A~ 65 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMA----RKEYSKAI-------DLYTQALSIAPANPIYLSNRAAAYSASGQH----------EKAA 65 (164)
T ss_dssp CCHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred hhhhHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCcCHHHHHHHHHHHHHccCH----------HHHH
Confidence 34567899999999999 99999999 699999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHH--HHHHHHHHH
Q 010864 282 SKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSV--YSSALRLVR 358 (498)
Q Consensus 282 ~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~--~~~~l~~~~ 358 (498)
.+|+++++++|++..+++++|.+|..+|+ +.+|..+|+++++++|++.. +..++..++
T Consensus 66 ~~~~~al~~~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 66 EDAELATVVDPKYSKAWSRLGLARFDMAD-------------------YKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHccC-------------------HHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999999974 555555444
No 132
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.53 E-value=3.1e-14 Score=126.22 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHhcCcchHHhh
Q 010864 206 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-------SPQ-----ALNNWGLALQELSAIVPAREK 273 (498)
Q Consensus 206 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~-------~~~-----a~~~lg~~l~~~g~~~~a~~~ 273 (498)
+..+.++|..+.. .|+|++|+ ..|++|++++|+ +.. +|+|+|.++..+|++
T Consensus 11 a~~~~~~G~~l~~----~g~~eeAi-------~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~------ 73 (159)
T 2hr2_A 11 AYLALSDAQRQLV----AGEYDEAA-------ANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF------ 73 (159)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH------
T ss_pred HHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH------
Confidence 4678999999999 99999999 699999999999 544 999999999999999
Q ss_pred hhhHHHHHHHHHHHHHh-------cCCCHHHH----HHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 274 QTIVRTAISKFRAAIQL-------QFDFHRAI----YNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 274 ~~~~~~Ai~~~~~Al~l-------~P~~~~a~----~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
++|+.+|++||++ +|++..+| +++|.+|..+|+ +++|+.+|+++++
T Consensus 74 ----~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr-------------------~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 ----DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGR-------------------GAEAMPEFKKVVE 130 (159)
T ss_dssp ----HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCC-------------------HHHHHHHHHHHHh
Confidence 9999999999999 99999999 999999999999 9999999999999
Q ss_pred cCCCHH
Q 010864 343 LKPSYS 348 (498)
Q Consensus 343 l~p~~~ 348 (498)
++|++.
T Consensus 131 l~p~d~ 136 (159)
T 2hr2_A 131 MIEERK 136 (159)
T ss_dssp HHHHCC
T ss_pred cCCCcH
Confidence 999887
No 133
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.53 E-value=4.8e-14 Score=137.74 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=147.0
Q ss_pred hhhcHHHHHHHHHHhhhcc----------------hhhHHhhcc--------------------HHHHHHHHHHHHHh--
Q 010864 112 LAEQNNAAMELINSVTGVD----------------EEGRSRQRI--------------------LTFAAKRYANAIER-- 153 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~--------------------~~~A~~~~~~al~~-- 153 (498)
..+++++|...+.+++... +..+...|+ +++|+..|++++.+
T Consensus 95 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~ 174 (338)
T 3ro2_A 95 VLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVT 174 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3467777777776665543 234566788 99999999999876
Q ss_pred ----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHc
Q 010864 154 ----NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMR 223 (498)
Q Consensus 154 ----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~ 223 (498)
.+....++.++|.++...|+ +++|+..|++++++.+.. ..+++++|.++.. .
T Consensus 175 ~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~ 236 (338)
T 3ro2_A 175 ALGDRAAQGRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF----L 236 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----H
T ss_pred hcCCHHHHHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----c
Confidence 34456789999999999999 999999999999986542 3489999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCC------HHH
Q 010864 224 GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRA 297 (498)
Q Consensus 224 g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~------~~a 297 (498)
|++++|++.+++++..+.+. ...+....+++++|.++..+|++ ++|+.+|++++++.+.. ..+
T Consensus 237 g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~ 305 (338)
T 3ro2_A 237 GEFETASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELKDRIGEGRA 305 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 99999996555555444431 00111278899999999999999 99999999999986543 568
Q ss_pred HHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 298 IYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 298 ~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
+.++|.+|..+|+ +.+|..+|++++++.+.
T Consensus 306 ~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 306 CWSLGNAYTALGN-------------------HDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHTC-------------------HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHcCC-------------------hHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999998765
No 134
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.6e-13 Score=118.42 Aligned_cols=121 Identities=18% Similarity=0.096 Sum_probs=113.5
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHHHHcCCHHH
Q 010864 152 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---HDAFYNWAIAISDRAKMRGRTKE 228 (498)
Q Consensus 152 ~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---~~a~~~lg~~~~~~~~~~g~~~e 228 (498)
..+|.+...++.+|..++..|+ +++|+..|+++++++|++ ..+++++|.++.. .|++++
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~ 83 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGD--------------YGGALAAYTQALGLDATPQDQAVLHRNRAACHLK----LEDYDK 83 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH----TTCHHH
T ss_pred ccchHHHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----HccHHH
Confidence 3467899999999999999999 999999999999999998 8999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 010864 229 AEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG 307 (498)
Q Consensus 229 A~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~ 307 (498)
|+ ..|+++++++|++..+++++|.++..+|++ ++|+.+|+++++++|++..++..++.+...
T Consensus 84 A~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 84 AE-------TEASKAIEKDGGDVKALYRRSQALEKLGRL----------DQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HH-------HHHHHHHHHTSCCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HH-------HHHHHHHhhCccCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 99 688999999999999999999999999999 999999999999999999999988887543
No 135
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.52 E-value=1.1e-13 Score=135.22 Aligned_cols=166 Identities=14% Similarity=-0.003 Sum_probs=126.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++.++|+++.+++++|.+|..+|+ +++|+..|+++++++|++..+++++|
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~lg 79 (281)
T 2c2l_A 14 LFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ--------------PEQALADCRRALELDGQSVKAHFFLG 79 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH---HHHhcCcchH----------------Hhhh
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA---LQELSAIVPA----------------REKQ 274 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~---l~~~g~~~~a----------------~~~~ 274 (498)
.+|.. +|++++|+ ..|+++++++|++...+...... +.+...+... .-..
T Consensus 80 ~~~~~----~g~~~~A~-------~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~ 148 (281)
T 2c2l_A 80 QCQLE----MESYDEAI-------ANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIA 148 (281)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred HHHHH----cCCHHHHH-------HHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99999 99999999 56666666666542111111111 1100000000 0124
Q ss_pred hhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 275 TIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 275 ~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
|++++|+..|+++++++|++......++.++...++ .+.++...|.++.+
T Consensus 149 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~------------------~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 149 AERERELEECQRNHEGHEDDGHIRAQQACIEAKHDK------------------YMADMDELFSQVDE 198 (281)
T ss_dssp HHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHHHH------------------HHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhhhccccchhhhhhHHHHHHHHHHH------------------HHHHHHHHHHhhhc
Confidence 556899999999999999888888888777766632 15667777776654
No 136
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.52 E-value=1.3e-14 Score=141.08 Aligned_cols=171 Identities=12% Similarity=0.041 Sum_probs=138.6
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHH-------HHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHH
Q 010864 136 RQRILTFAAKRYANAIERNPEDYDALYNW-------ALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDA 208 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~~P~~~~a~~~l-------g~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a 208 (498)
..+++..|..+|.++++++|+.+++|.++ +.++..+++ +.+++..+++++.+.|+...+
T Consensus 18 ~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r--------------~~~a~~~~~~~l~l~p~~l~a 83 (282)
T 4f3v_A 18 LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWY--------------SRRNFGQLSGSVQISMSTLNA 83 (282)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHH--------------TGGGTTHHHHTTTCCGGGGCC
T ss_pred cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHH--------------HHHHHHHHHHHhcCChhhhhh
Confidence 47999999999999999999999999999 999999999 999999999999998886655
Q ss_pred HHH---------------------HHHHHHHHHHHcCCHHHHHHHHH--------------------------HHHHHHH
Q 010864 209 FYN---------------------WAIAISDRAKMRGRTKEAEELWK--------------------------QATKNYE 241 (498)
Q Consensus 209 ~~~---------------------lg~~~~~~~~~~g~~~eA~~~~~--------------------------~Al~~~~ 241 (498)
+++ ++.++.. .|+|++|.+.|+ .|+..|+
T Consensus 84 ~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~----~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~ 159 (282)
T 4f3v_A 84 RIAIGGLYGDITYPVTSPLAITMGFAACEAA----QGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVK 159 (282)
T ss_dssp EEECCTTTCCCEEECSSHHHHHHHHHHHHHH----HTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred hhccCCcccccccccCCHhHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 555 7788888 999999996542 3444444
Q ss_pred HHHhcC-CCC-HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc--CC-CHHHHHHHHHHHHHcchhHHhcc
Q 010864 242 KAVQLN-WNS-PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ--FD-FHRAIYNLGTVLYGLAEDTLRTG 316 (498)
Q Consensus 242 ~Al~l~-P~~-~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~--P~-~~~a~~~Lg~~~~~~g~~~~~~~ 316 (498)
+++... |.+ ..+++++|.++..+|++ ++|+.+|++++.-. |. ...+++++|.++..+|+
T Consensus 160 ~a~~~~d~~~~~~a~~~LG~al~~LG~~----------~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr------ 223 (282)
T 4f3v_A 160 SAGKWPDKFLAGAAGVAHGVAAANLALF----------TEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN------ 223 (282)
T ss_dssp TGGGCSCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC------
T ss_pred HhhccCCcccHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC------
Confidence 443332 111 34667777777777776 99999999998654 65 66799999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 317 GTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSAL 354 (498)
Q Consensus 317 ~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l 354 (498)
.++|...|+++++.+|+ .....+|
T Consensus 224 -------------~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 224 -------------ESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp -------------HHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred -------------HHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 89999999999999999 7665555
No 137
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.52 E-value=1.9e-13 Score=146.88 Aligned_cols=170 Identities=9% Similarity=0.063 Sum_probs=146.0
Q ss_pred HHHHHHHHHHhhhcch----------hhHHhhcc----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--C
Q 010864 116 NNAAMELINSVTGVDE----------EGRSRQRI----------LTFAAKRYANAIERNPEDYDALYNWALVLQESA--D 173 (498)
Q Consensus 116 ~~~A~~~~~~~~~~~~----------~~~~~~g~----------~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g--~ 173 (498)
.++|++.+..++.... ......++ +++++..++++++.+|++..+|+.++.++..++ +
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~ 124 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 124 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc
Confidence 3466677776666652 22334555 999999999999999999999999999999999 5
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHhcCCCCHH
Q 010864 174 NVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG-RTKEAEELWKQATKNYEKAVQLNWNSPQ 252 (498)
Q Consensus 174 ~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g-~~~eA~~~~~~Al~~~~~Al~l~P~~~~ 252 (498)
+++++++++++++++|.+..+|++.+.++.. .| .+++++ +++.++++.+|.+..
T Consensus 125 --------------~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~----l~~~~~~el-------~~~~~~I~~~p~n~s 179 (567)
T 1dce_A 125 --------------WARELELCARFLEADERNFHCWDYRRFVAAQ----AAVAPAEEL-------AFTDSLITRNFSNYS 179 (567)
T ss_dssp --------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TCCCHHHHH-------HHHHTTTTTTCCCHH
T ss_pred --------------HHHHHHHHHHHHhhccccccHHHHHHHHHHH----cCCChHHHH-------HHHHHHHHHCCCCcc
Confidence 7999999999999999999999999999999 99 787777 799999999999999
Q ss_pred HHHHHHHHHHHhcCcchHH----hhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 253 ALNNWGLALQELSAIVPAR----EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 253 a~~~lg~~l~~~g~~~~a~----~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+|+++|.++..++....+. -..+.+++|++++.+|+.++|++..+|+.++.++...++
T Consensus 180 aW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 180 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp HHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCC
Confidence 9999999999975542221 123667999999999999999999999999999988776
No 138
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.51 E-value=2.7e-13 Score=144.17 Aligned_cols=163 Identities=13% Similarity=0.088 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------hcCcCCCCCCCCchhhhHH-------HHHHHHHHHHH-hCCCC
Q 010864 141 TFAAKRYANAIERNPEDYDALYNWALVLQE-------SADNVSLDSTSPSKDALLE-------EACKKYDEATR-LCPTL 205 (498)
Q Consensus 141 ~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-------~g~~~~~~~~~~~~~~~~~-------~A~~~~~~Al~-l~p~~ 205 (498)
..++..|++++..+|.++++|+++|..+.. .|+ ++ +|+..|++|++ ++|++
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~--------------~~~a~~~~~~A~~~~~~Al~~~~p~~ 320 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGD--------------MNNAKLFSDEAANIYERAISTLLKKN 320 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTC--------------CHHHHHHHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccc--------------hhhhhhhhHHHHHHHHHHHHHhCccc
Confidence 478899999999999999999999999987 677 76 99999999997 89999
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHhcCcchH--------------
Q 010864 206 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP-QALNNWGLALQELSAIVPA-------------- 270 (498)
Q Consensus 206 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~-~a~~~lg~~l~~~g~~~~a-------------- 270 (498)
..+|+++|.++.. .|++++|. ..|+++++++|.++ .+|.++|.++.+.|++++|
T Consensus 321 ~~l~~~~~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 321 MLLYFAYADYEES----RMKYEKVH-------SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHHHHHHHHHHHh----cCCHHHHH-------HHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 9999999999999 99999999 68999999999985 6999999999999988766
Q ss_pred -----------HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHH
Q 010864 271 -----------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAA 339 (498)
Q Consensus 271 -----------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 339 (498)
+...|++++|+..|+++++..|+++.+|.+++.++..+|+ +..|..+|++
T Consensus 390 ~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~-------------------~~~Ar~~~~~ 450 (530)
T 2ooe_A 390 HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE-------------------DNNTRVLFER 450 (530)
T ss_dssp THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTC-------------------HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCC-------------------HhhHHHHHHH
Confidence 1136788999999999999999999999999999999888 8899999999
Q ss_pred HHhcCCCH
Q 010864 340 AHALKPSY 347 (498)
Q Consensus 340 Al~l~p~~ 347 (498)
++...|.+
T Consensus 451 al~~~~~~ 458 (530)
T 2ooe_A 451 VLTSGSLP 458 (530)
T ss_dssp HHHSCCSC
T ss_pred HHhccCCC
Confidence 99886544
No 139
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.51 E-value=1.8e-13 Score=116.26 Aligned_cols=101 Identities=16% Similarity=0.040 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHH
Q 010864 208 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 208 a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
.++.+|.++.. .|++++|+ ..|+++++++|+++.+|+++|.++..+|++ ++|+.+|+++
T Consensus 19 ~~~~~g~~~~~----~g~~~~A~-------~~~~~al~~~P~~~~a~~~lg~~~~~~g~~----------~~A~~~~~~a 77 (121)
T 1hxi_A 19 NPMEEGLSMLK----LANLAEAA-------LAFEAVCQKEPEREEAWRSLGLTQAENEKD----------GLAIIALNHA 77 (121)
T ss_dssp CHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHH
T ss_pred hHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHH
Confidence 47899999999 99999999 699999999999999999999999999999 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 288 IQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 288 l~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
++++|++..++++||.+|..+|+ +.+|..+|+++++++|++.
T Consensus 78 l~l~P~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 78 RMLDPKDIAVHAALAVSHTNEHN-------------------ANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHC------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999999999 9999999999999999865
No 140
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.51 E-value=1e-12 Score=110.21 Aligned_cols=109 Identities=22% Similarity=0.256 Sum_probs=105.1
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|+++.+++.+|.++...|+ +++|+..|++++.++|++..+++++|
T Consensus 22 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 22 QMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGN--------------YAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhc--------------hHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
.++.. .|++++|+ ..|+++++++|++..++.++|.++..+|++
T Consensus 88 ~~~~~----~~~~~~A~-------~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 88 LALSS----LNKHVEAV-------AYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHH----hCCHHHHH-------HHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 99999 99999999 699999999999999999999999999986
No 141
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.50 E-value=2.5e-13 Score=137.77 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=123.7
Q ss_pred hhhcHHHHHHHHHHhhhcc----------------hhhHHhhccHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHH
Q 010864 112 LAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPE-------DYDALYNWALVL 168 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~~~~A~~~~~~al~~~P~-------~~~a~~~lg~~~ 168 (498)
..+++++|+..+.++.... +..+...|++++|+.+|++++++.+. .+.+++++|.+|
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 4577888888888876553 33467789999999999999987543 356889999999
Q ss_pred HHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 010864 169 QESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK 242 (498)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~ 242 (498)
..+|+ +++|+..|++++.+.+. ...+++++|.+|.. +|++++|+..|++|+..+++
T Consensus 193 ~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 193 DDFKH--------------YDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp HHTTC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCC--------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHh
Confidence 99999 99999999999998431 35689999999999 99999999766666665554
Q ss_pred HHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 243 AVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 243 Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
. .+|....+++++|.++..+|++ ++|+.+|++++++
T Consensus 255 ~--~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~ 290 (378)
T 3q15_A 255 K--VPDLLPKVLFGLSWTLCKAGQT----------QKAFQFIEEGLDH 290 (378)
T ss_dssp H--CGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred h--CChhHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHH
Confidence 3 5677899999999999999999 8888888888887
No 142
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.50 E-value=4.2e-14 Score=139.84 Aligned_cols=171 Identities=18% Similarity=0.175 Sum_probs=136.5
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHh-hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHH
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSR-QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEA 191 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A 191 (498)
++++.+|..++.++.......+++ .+++++|+.+|.++ |.+|...|+ +++|
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a--------------~~~~~~~g~--------------~~~A 55 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKA--------------AVAFKNAKQ--------------LEQA 55 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHH--------------HHHHHHTTC--------------HHHH
T ss_pred cchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHH--------------HHHHHHcCC--------------HHHH
Confidence 356677777777665543222233 57788888888776 678999999 9999
Q ss_pred HHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHh
Q 010864 192 CKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSPQALNNWGLALQEL 264 (498)
Q Consensus 192 ~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P-~~~~a~~~lg~~l~~~ 264 (498)
+.+|.+++++.+.. ..++.++|.+|.. +|++++|+..|++|+..+.+.- ++ ....+++++|.+|..
T Consensus 56 ~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~Al~l~~~~g--~~~~~a~~~~~lg~~~~~- 128 (307)
T 2ifu_A 56 KDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKD----LQRMPEAVQYIEKASVMYVENG--TPDTAAMALDRAGKLMEP- 128 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCGGGGHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHc-
Confidence 99999999996542 5689999999999 9999999977777776654310 11 135789999999998
Q ss_pred cCcchHHhhhhhHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHH
Q 010864 265 SAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 338 (498)
Q Consensus 265 g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 338 (498)
|++ ++|+.+|++|+++.+.. ..+++++|.+|..+|+ +.+|+.+|+
T Consensus 129 g~~----------~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~ 179 (307)
T 2ifu_A 129 LDL----------SKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQK-------------------FDEAAASLQ 179 (307)
T ss_dssp TCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHH
T ss_pred CCH----------HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHH
Confidence 999 99999999999997754 5789999999999999 999999999
Q ss_pred HHHhcCCCH
Q 010864 339 AAHALKPSY 347 (498)
Q Consensus 339 ~Al~l~p~~ 347 (498)
+++.+.|++
T Consensus 180 ~al~~~~~~ 188 (307)
T 2ifu_A 180 KEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999986654
No 143
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.49 E-value=1.2e-14 Score=146.18 Aligned_cols=148 Identities=20% Similarity=0.113 Sum_probs=97.8
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH-----------------HHHH
Q 010864 148 ANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH-----------------DAFY 210 (498)
Q Consensus 148 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~-----------------~a~~ 210 (498)
...++..+..+..++.+|.+++..|+ |++|+..|++++.+.|++. .+|+
T Consensus 169 ~~~~~~~~~~a~~~~~~g~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~ 234 (338)
T 2if4_A 169 DMTVEERIGAADRRKMDGNSLFKEEK--------------LEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHL 234 (338)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTCSSSC--------------CHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHH
Confidence 33334445567889999999999999 9999999999999999987 4999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 211 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 211 ~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
++|.+|.. +|++++|+ .+|+++++++|++..+++++|.+|..+|++ ++|+.+|++++++
T Consensus 235 nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~a~~~~g~~----------~~A~~~l~~al~l 293 (338)
T 2if4_A 235 NIAACLIK----LKRYDEAI-------GHCNIVLTEEEKNPKALFRRGKAKAELGQM----------DSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHT----TTCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHTTC-
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHH
Confidence 99999999 99999999 699999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 291 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 291 ~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
+|++..++.+|+.+...... ....+...|.+++...|++.
T Consensus 294 ~p~~~~a~~~L~~l~~~~~~------------------~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 294 APDDKAIRRELRALAEQEKA------------------LYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ----------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHhhCCCCCCC
Confidence 99999999999988655443 15667778899999988775
No 144
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.49 E-value=4.2e-13 Score=114.84 Aligned_cols=117 Identities=18% Similarity=0.169 Sum_probs=105.5
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHH
Q 010864 200 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRT 279 (498)
Q Consensus 200 ~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~ 279 (498)
..+|.++..++++|.++.. .|++++|+ ..|++++.++|++..+++++|.++..+|++ ++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~l~~~~~~~~~~----------~~ 61 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFV----GRKYPEAA-------ACYGRAITRNPLVAVYYTNRALCYLKMQQP----------EQ 61 (137)
T ss_dssp ---CCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HH
T ss_pred CCccccHHHHHHHHHHHHH----hCcHHHHH-------HHHHHHHhhCcCcHHHHHHHHHHHHHhcCH----------HH
Confidence 4578899999999999999 99999999 699999999999999999999999999999 99
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC-----HHHHHHHH
Q 010864 280 AISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS-----YSVYSSAL 354 (498)
Q Consensus 280 Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~-----~~~~~~~l 354 (498)
|+.+|+++++++|+++.+++++|.+|..+|+ +..|..+|.++++++|+ +......+
T Consensus 62 A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l 122 (137)
T 3q49_B 62 ALADCRRALELDGQSVKAHFFLGQCQLEMES-------------------YDEAIANLQRAYSLAKEQRLNFGDDIPSAL 122 (137)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHHTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHhCchhHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHChhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999998 44444444
Q ss_pred HH
Q 010864 355 RL 356 (498)
Q Consensus 355 ~~ 356 (498)
..
T Consensus 123 ~~ 124 (137)
T 3q49_B 123 RI 124 (137)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 145
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.49 E-value=7.8e-15 Score=154.55 Aligned_cols=118 Identities=16% Similarity=0.119 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 237 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al 237 (498)
+.+++++|.++...|+ +++|++.|++|++++|++..+++++|.+|.. +|++++|+
T Consensus 6 a~~~~~lg~~~~~~g~--------------~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~----~g~~~~A~------- 60 (477)
T 1wao_1 6 AEELKTQANDYFKAKD--------------YENAIKFYSQAIELNPSNAIYYGNRSLAYLR----TECYGYAL------- 60 (477)
T ss_dssp HTTSSSSSSSTTTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hcCHHHHH-------
Confidence 4456677777777777 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH--HHHcch
Q 010864 238 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV--LYGLAE 310 (498)
Q Consensus 238 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~--~~~~g~ 310 (498)
..|+++++++|+++.+++++|.+|..+|++ ++|+..|+++++++|++..++.+++.+ +..+|+
T Consensus 61 ~~~~~al~l~p~~~~~~~~lg~~~~~~g~~----------~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~ 125 (477)
T 1wao_1 61 GDATRAIELDKKYIKGYYRRAASNMALGKF----------RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKA 125 (477)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999 999999999999999999999999999 777676
No 146
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=3.1e-13 Score=126.26 Aligned_cols=154 Identities=18% Similarity=0.058 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 010864 142 FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAK 221 (498)
Q Consensus 142 ~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~ 221 (498)
+|+..|+++.+. .++.+++++|.+|...++ +++|+.+|+++++. +++.++++||.+|..
T Consensus 4 eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~--- 62 (212)
T 3rjv_A 4 EPGSQYQQQAEA--GDRRAQYYLADTWVSSGD--------------YQKAEYWAQKAAAQ--GDGDALALLAQLKIR--- 62 (212)
T ss_dssp CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHT--TCHHHHHHHHHHTTS---
T ss_pred hHHHHHHHHHHC--CCHHHHHHHHHHHhcCCC--------------HHHHHHHHHHHHHc--CCHHHHHHHHHHHHc---
Confidence 578899999876 899999999999999999 99999999999875 689999999999975
Q ss_pred HcC---CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCcchHHhhhhhHHHHHHHHHHHHHhcC--
Q 010864 222 MRG---RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQF-- 292 (498)
Q Consensus 222 ~~g---~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P-- 292 (498)
.| ++++|+ .+|++++ +++++.++++||.+|.. .+++ ++|+.+|+++++..+
T Consensus 63 -~g~~~~~~~A~-------~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~----------~~A~~~~~~A~~~~~~~ 122 (212)
T 3rjv_A 63 -NPQQADYPQAR-------QLAEKAV--EAGSKSGEIVLARVLVNRQAGATDV----------AHAITLLQDAARDSESD 122 (212)
T ss_dssp -STTSCCHHHHH-------HHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCH----------HHHHHHHHHHTSSTTSH
T ss_pred -CCCCCCHHHHH-------HHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCH----------HHHHHHHHHHHHcCCCc
Confidence 43 788888 5777775 46799999999999987 6676 999999999999988
Q ss_pred CCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 293 DFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 293 ~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
+++.++++||.+|.. .++ +.+|..+|+++.++ +.+......+..
T Consensus 123 ~~~~a~~~Lg~~y~~g~g~~~d-------------------~~~A~~~~~~A~~~-~~~~~a~~~Lg~ 170 (212)
T 3rjv_A 123 AAVDAQMLLGLIYASGVHGPED-------------------DVKASEYFKGSSSL-SRTGYAEYWAGM 170 (212)
T ss_dssp HHHHHHHHHHHHHHHTSSSSCC-------------------HHHHHHHHHHHHHT-SCTTHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 469999999999988 555 89999999999998 444433333333
No 147
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.48 E-value=2.2e-13 Score=124.41 Aligned_cols=163 Identities=9% Similarity=0.040 Sum_probs=129.9
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh------CCCCHHH
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------CPTLHDA 208 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------~p~~~~a 208 (498)
...|++++|...++......+....+++.+|.++...|+ +++|+..|++++.+ .+....+
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~ 68 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDR--------------FDEARASFQALQQQAQKSGDHTAEHRA 68 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 457899999996555544333678999999999999999 99999999999995 4456789
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHH
Q 010864 209 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 209 ~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P-~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
++++|.++.. +|++++|+..+++|+..+++ ...++ ....+++++|.++..+|++ ++|+.+|+++
T Consensus 69 ~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~a 133 (203)
T 3gw4_A 69 LHQVGMVERM----AGNWDAARRCFLEERELLAS-LPEDPLAASANAYEVATVALHFGDL----------AGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTCH----------HHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHHHHhCCH----------HHHHHHHHHH
Confidence 9999999999 99999999777777666552 11122 3467899999999999999 9999999999
Q ss_pred HHhcC--CC----HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCC
Q 010864 288 IQLQF--DF----HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 345 (498)
Q Consensus 288 l~l~P--~~----~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p 345 (498)
+++.+ ++ ..++.++|.++..+|+ +.+|..++.+++++..
T Consensus 134 l~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 134 LVYAQQADDQVAIACAFRGLGDLAQQEKN-------------------LLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHCcC-------------------HHHHHHHHHHHHHHHH
Confidence 98743 22 3457899999999999 8999999999988744
No 148
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.48 E-value=4.7e-13 Score=112.45 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=109.0
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 235 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 235 (498)
..+.+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 2 ~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~----- 58 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKD--------------FDTALKHYDKAKELDPTNMTYITNQAAVYFE----KGDYNKCR----- 58 (131)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-----
T ss_pred hHHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH----hccHHHHH-----
Confidence 346789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCC-------HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 010864 236 ATKNYEKAVQLNWNS-------PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL 308 (498)
Q Consensus 236 Al~~~~~Al~l~P~~-------~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~ 308 (498)
..|++++.++|++ ..+++++|.++...|++ ++|+.+|++++++.| +...+..++.++..+
T Consensus 59 --~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 59 --ELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKY----------KDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp --HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 5777777777766 89999999999999999 999999999999999 589999999988776
Q ss_pred ch
Q 010864 309 AE 310 (498)
Q Consensus 309 g~ 310 (498)
++
T Consensus 126 ~~ 127 (131)
T 1elr_A 126 KE 127 (131)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 149
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.48 E-value=7.3e-14 Score=128.48 Aligned_cols=148 Identities=11% Similarity=0.034 Sum_probs=118.8
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 236 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 236 (498)
.+..+...+.....+|+ +++|.+.+.......+..+..+.++|.++.. .|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~------ 58 (198)
T 2fbn_A 3 SSHHHHHHSSGRENLYF--------------QGAKKSIYDYTDEEKVQSAFDIKEEGNEFFK----KNEINEAI------ 58 (198)
T ss_dssp ---------------------------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHH----TTCHHHHH------
T ss_pred Ccccccchhhhhhhhhh--------------ccccCchhhCCHHHHHHHHHHHHHHHHHHHH----cCCHHHHH------
Confidence 34445566666777777 9999888888888788888999999999999 99999999
Q ss_pred HHHHHHHHhcCCCCH----------------HHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHH
Q 010864 237 TKNYEKAVQLNWNSP----------------QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYN 300 (498)
Q Consensus 237 l~~~~~Al~l~P~~~----------------~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~ 300 (498)
..|++++.+.|.++ .+++++|.+|..+|++ ++|+.+|+++++++|++..++++
T Consensus 59 -~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~ 127 (198)
T 2fbn_A 59 -VKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDY----------PKAIDHASKVLKIDKNNVKALYK 127 (198)
T ss_dssp -HHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHH
T ss_pred -HHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCcccHHHHHH
Confidence 68999999998887 8999999999999999 99999999999999999999999
Q ss_pred HHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 301 LGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 301 Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
+|.+|..+|+ +..|..+|+++++++|++......+..+.
T Consensus 128 lg~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 128 LGVANMYFGF-------------------LEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHTC-------------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHccc-------------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 9999999999 99999999999999999986666655544
No 150
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.48 E-value=3.5e-13 Score=113.89 Aligned_cols=108 Identities=23% Similarity=0.269 Sum_probs=103.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++++|.+|...|+ +++|+..|+++++++|++..+++++|
T Consensus 26 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 26 CFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLE--------------FQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp HHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 5668999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 266 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 266 (498)
.++.. +|++++|+ ..|+++++++|++..++.+++.++..+|+
T Consensus 92 ~~~~~----~~~~~~A~-------~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEA----MKDYTKAM-------DVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHH----HhhHHHHH-------HHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999 99999999 69999999999999999999999998874
No 151
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=2e-13 Score=111.57 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=102.7
Q ss_pred hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 153 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 153 ~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
++|+++.+++.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-- 60 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGN--------------YTESIDLFEKAIQLDPEESKYWLMKGKALYN----LERYEEAV-- 60 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCC--------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCCCcHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH----ccCHHHHH--
Confidence 468899999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHh-cCcchHHhhhhhHHHHHHHHHHHHHhcCCC
Q 010864 233 WKQATKNYEKAVQLNWN--SPQALNNWGLALQEL-SAIVPAREKQTIVRTAISKFRAAIQLQFDF 294 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P~--~~~a~~~lg~~l~~~-g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~ 294 (498)
..|+++++.+|+ +..+++++|.++..+ |++ ++|+.+|++++...|.+
T Consensus 61 -----~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 61 -----DCYNYVINVIEDEYNKDVWAAKADALRYIEGKE----------VEAEIAEARAKLEHHHH 110 (112)
T ss_dssp -----HHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCS----------HHHHHHHHHHGGGCCCC
T ss_pred -----HHHHHHHHhCcccchHHHHHHHHHHHHHHhCCH----------HHHHHHHHHHhhcccCC
Confidence 699999999999 999999999999999 999 99999999999999875
No 152
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.48 E-value=4.7e-13 Score=118.84 Aligned_cols=122 Identities=10% Similarity=0.103 Sum_probs=104.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh-----------cCCCCHHHHHHHHHHHHHhcCcchHHhh
Q 010864 205 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ-----------LNWNSPQALNNWGLALQELSAIVPAREK 273 (498)
Q Consensus 205 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~-----------l~P~~~~a~~~lg~~l~~~g~~~~a~~~ 273 (498)
.+..+.++|..+.. .|++++|+..|++|+..+..... .+|.+..+++++|.+|..+|++
T Consensus 10 ~a~~~~~~G~~~~~----~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~------ 79 (162)
T 3rkv_A 10 SVEALRQKGNELFV----QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDL------ 79 (162)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCH------
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcH------
Confidence 35678999999999 99999999655555555443221 1677789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH-HHHH
Q 010864 274 QTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS-VYSS 352 (498)
Q Consensus 274 ~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~-~~~~ 352 (498)
++|+.+|+++++++|+++.+++++|.+|..+|+ +..|..+|.++++++|++. .+..
T Consensus 80 ----~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~-------------------~~~A~~~~~~al~l~p~~~~~~~~ 136 (162)
T 3rkv_A 80 ----HEAEETSSEVLKREETNEKALFRRAKARIAAWK-------------------LDEAEEDLKLLLRNHPAAASVVAR 136 (162)
T ss_dssp ----HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ----HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhc-------------------HHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999999999999999999999999999999 9999999999999999998 6666
Q ss_pred HHHHHHc
Q 010864 353 ALRLVRS 359 (498)
Q Consensus 353 ~l~~~~~ 359 (498)
.+..+..
T Consensus 137 ~l~~~~~ 143 (162)
T 3rkv_A 137 EMKIVTE 143 (162)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 153
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.47 E-value=6.1e-14 Score=147.69 Aligned_cols=127 Identities=19% Similarity=0.188 Sum_probs=115.3
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+..+|++++|+.+|+++++++|+++.+|+++|.+|..+|+ +++|+..|+++++++|++..+++++|
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTEC--------------YGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHhcCcchHHhhhhhHHHHHHHHH------
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA--LQELSAIVPAREKQTIVRTAISKFR------ 285 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~--l~~~g~~~~a~~~~~~~~~Ai~~~~------ 285 (498)
.+|.. +|++++|+ ..|+++++++|++..++.+++.+ +..+|++ ++|+..|+
T Consensus 82 ~~~~~----~g~~~eA~-------~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~----------~~A~~~~~~~~~~~ 140 (477)
T 1wao_1 82 ASNMA----LGKFRAAL-------RDYETVVKVKPHDKDAKMKYQECNKIVKQKAF----------ERAIAGDEHKRSVV 140 (477)
T ss_dssp HHHHH----HTCHHHHH-------HHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHH----------CCC------CCSTT
T ss_pred HHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH----------HHHhccccccchhH
Confidence 99999 99999999 69999999999999999999999 8888888 99999999
Q ss_pred -----HHHHhcCCCH
Q 010864 286 -----AAIQLQFDFH 295 (498)
Q Consensus 286 -----~Al~l~P~~~ 295 (498)
++++++|++.
T Consensus 141 ~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 141 DSLDIESMTIEDEYS 155 (477)
T ss_dssp TCCTTSSCCCCTTCC
T ss_pred hhhhhhhcccccccc
Confidence 8888877653
No 154
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.46 E-value=1.6e-12 Score=109.97 Aligned_cols=116 Identities=14% Similarity=0.034 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010864 159 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH---DAFYNWAIAISDRAKMRGRTKEAEELWKQ 235 (498)
Q Consensus 159 ~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~---~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 235 (498)
++++.+|.++...|+ +++|+..|+++++.+|++. .+++++|.++.. .|++++|+
T Consensus 3 ~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~----~~~~~~A~----- 59 (129)
T 2xev_A 3 RTAYNVAFDALKNGK--------------YDDASQLFLSFLELYPNGVYTPNALYWLGESYYA----TRNFQLAE----- 59 (129)
T ss_dssp CCHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred HHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH----hccHHHHH-----
Confidence 467899999999999 9999999999999999988 899999999999 99999999
Q ss_pred HHHHHHHHHhcCCCC---HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 236 ATKNYEKAVQLNWNS---PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 236 Al~~~~~Al~l~P~~---~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
..|++++..+|++ +.+++++|.++..+|++ ++|+..|+++++..|++..+...+..+-...+
T Consensus 60 --~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 60 --AQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN----------TEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp --HHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 6999999999999 99999999999999999 99999999999999999988776666554443
No 155
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.45 E-value=1.7e-12 Score=130.04 Aligned_cols=174 Identities=11% Similarity=0.015 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhhcch----------hhHHhhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-c-CcCCCCCCCCc
Q 010864 117 NAAMELINSVTGVDE----------EGRSRQR-ILTFAAKRYANAIERNPEDYDALYNWALVLQES-A-DNVSLDSTSPS 183 (498)
Q Consensus 117 ~~A~~~~~~~~~~~~----------~~~~~~g-~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-g-~~~~~~~~~~~ 183 (498)
++|+.++..++..+. ......+ .+++++.+++++|..+|++..+|+.++.++..+ + +
T Consensus 71 e~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~---------- 140 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQD---------- 140 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSC----------
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCC----------
Confidence 456777777776662 2234456 599999999999999999999999999999998 7 7
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKE-AEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~e-A~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~ 262 (498)
++++++++.++++++|++..+|+..+.++.. .|+++. ..+.+.+++..+.++++.+|.|..+|++++.++.
T Consensus 141 ----~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~----l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~ 212 (349)
T 3q7a_A 141 ----PVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH----FSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRV 212 (349)
T ss_dssp ----CHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH----HHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred ----hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999998 776651 1234456668999999999999999999999999
Q ss_pred HhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchh
Q 010864 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAED 311 (498)
Q Consensus 263 ~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~ 311 (498)
.++++. .....+++++++++++|.++|++..+|+++..++...|+.
T Consensus 213 ~l~~~~---~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 213 SRPGAE---TSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp TSTTCC---CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred hccccc---cchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 998720 1122349999999999999999999999999999887764
No 156
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.43 E-value=4.6e-12 Score=104.22 Aligned_cols=104 Identities=19% Similarity=0.188 Sum_probs=99.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|+++.+++++|.++...|+ +++|+..|++++.++|++..+++++|
T Consensus 14 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a 79 (118)
T 1elw_A 14 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGD--------------YQKAYEDGCKTVDLKPDWGKGYSRKA 79 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhcc--------------HHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~ 262 (498)
.++.. +|++++|+ ..|+++++.+|++..++.+++.+..
T Consensus 80 ~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 80 AALEF----LNRFEEAK-------RTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHH----HhhHHHHH-------HHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999 99999999 6999999999999999999998753
No 157
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.43 E-value=5e-12 Score=104.99 Aligned_cols=107 Identities=31% Similarity=0.391 Sum_probs=102.3
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+...|++++|+..|++++..+|++..+++.+|.++...|+ +++|+..|++++.++|++..+++++|
T Consensus 19 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la 84 (125)
T 1na0_A 19 YYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYNLG 84 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS 265 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g 265 (498)
.++.. .|++++|+ ..|+++++.+|++..++.++|.++...|
T Consensus 85 ~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 85 NAYYK----QGDYDEAI-------EYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHH----hcCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999 99999999 6999999999999999999999998765
No 158
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.43 E-value=1.3e-12 Score=132.97 Aligned_cols=118 Identities=19% Similarity=0.150 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR----------------LCPTLHDAFYNWAIAISDRAK 221 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~----------------l~p~~~~a~~~lg~~~~~~~~ 221 (498)
+..+..+|..++..|+ |++|+..|+++++ ++|.+..+|+++|.+|..
T Consensus 223 a~~~~~~g~~~~~~g~--------------~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--- 285 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQN--------------WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK--- 285 (370)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 4678999999999999 9999999999999 788889999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010864 222 MRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNL 301 (498)
Q Consensus 222 ~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~L 301 (498)
+|++++|+ .+|+++++++|+++.+++++|.+|..+|++ ++|+..|++|++++|++..++..+
T Consensus 286 -~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 286 -MSDWQGAV-------DSCLEALEIDPSNTKALYRRAQGWQGLKEY----------DQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp -TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred -ccCHHHHH-------HHHHHHHHhCchhHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999 699999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHcch
Q 010864 302 GTVLYGLAE 310 (498)
Q Consensus 302 g~~~~~~g~ 310 (498)
+.++..+++
T Consensus 348 ~~~~~~~~~ 356 (370)
T 1ihg_A 348 LKVKQKIKA 356 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999887
No 159
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.43 E-value=8.8e-12 Score=131.05 Aligned_cols=151 Identities=22% Similarity=0.187 Sum_probs=110.9
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-----cCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQES-----ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 211 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-----g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~ 211 (498)
.+++++|+..|+++++. +++.+++++|.+|... ++ +++|+..|+++++. ++..++++
T Consensus 272 ~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~--------------~~~A~~~~~~a~~~--~~~~a~~~ 333 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKN--------------REQAISWYTKSAEQ--GDATAQAN 333 (490)
T ss_dssp SCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCC--------------HHHHHHHHHHHHHT--TCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCC--------------HHHHHHHHHHHHhc--CCHHHHHH
Confidence 46666666666666543 5566666777666665 45 77777777777664 45566777
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCcchHHhhhhhHHHHHHHHHHH
Q 010864 212 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 212 lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
||.+|.. .|. .+.+++|+.+|+++++. +++.++++||.+|.. .+++ ++|+.+|++|
T Consensus 334 lg~~y~~----~g~----~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~----------~~A~~~~~~A 393 (490)
T 2xm6_A 334 LGAIYFR----LGS----EEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDE----------QQAAIWMRKA 393 (490)
T ss_dssp HHHHHHH----SCC----HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH----------HHHHHHHHHH
T ss_pred HHHHHHh----CCC----cccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH----------HHHHHHHHHH
Confidence 7777766 541 11234445778887776 678899999998888 6777 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010864 288 IQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 346 (498)
Q Consensus 288 l~l~P~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~ 346 (498)
++. +++.++++||.+|.. .++ +.+|..+|+++++.+|+
T Consensus 394 ~~~--~~~~a~~~Lg~~y~~g~g~~~d-------------------~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 394 AEQ--GLSAAQVQLGEIYYYGLGVERD-------------------YVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHHHHHHHHHHHCC
T ss_pred HhC--CCHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHHCCCC
Confidence 886 468999999999987 666 89999999999999955
No 160
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.43 E-value=1.5e-12 Score=136.21 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=102.4
Q ss_pred hHHhhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIERNPED---------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDE 197 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~ 197 (498)
.++++|+|++|+..|+++++++|.+ ..+|+++|.+|..+|+ |++|+.+|++
T Consensus 277 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~~~~ 342 (457)
T 1kt0_A 277 VYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLRE--------------YTKAVECCDK 342 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcC--------------HHHHHHHHHH
Confidence 3678999999999999999999999 7999999999999999 9999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 198 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 198 Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
+++++|++..+|+++|.+|.. +|++++|+ ..|+++++++|++..++.+++.++..++++
T Consensus 343 al~~~p~~~~a~~~~g~a~~~----~g~~~~A~-------~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLL----MNEFESAK-------GDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred HHhcCCccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999 799999999999999999999999999998
No 161
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.42 E-value=2e-13 Score=137.21 Aligned_cols=128 Identities=14% Similarity=0.104 Sum_probs=83.4
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY-----------------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYD 196 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~-----------------~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 196 (498)
+...|+|++|+.+|++++.++|++. .+|+++|.+|..+|+ |++|+.+|+
T Consensus 189 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~--------------~~~A~~~~~ 254 (338)
T 2if4_A 189 LFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKR--------------YDEAIGHCN 254 (338)
T ss_dssp TCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTC--------------CHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHH
Confidence 5778999999999999999999987 499999999999999 999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCcchHHhhhh
Q 010864 197 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ-ELSAIVPAREKQT 275 (498)
Q Consensus 197 ~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~-~~g~~~~a~~~~~ 275 (498)
++++++|++..+|+++|.+|.. +|++++|+ .+|+++++++|++..++.+|+.+.. ..+..
T Consensus 255 ~al~~~p~~~~a~~~lg~a~~~----~g~~~~A~-------~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~-------- 315 (338)
T 2if4_A 255 IVLTEEEKNPKALFRRGKAKAE----LGQMDSAR-------DDFRKAQKYAPDDKAIRRELRALAEQEKALY-------- 315 (338)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHT----TTCHHHHH-------HHHHHTTC-------------------------------
T ss_pred HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999 99999999 6999999999999999999999854 44555
Q ss_pred hHHHHHHHHHHHHHhcCCCHH
Q 010864 276 IVRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 276 ~~~~Ai~~~~~Al~l~P~~~~ 296 (498)
+++...|++++...|+++.
T Consensus 316 --~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 316 --QKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ---------------------
T ss_pred --HHHHHHHHHhhCCCCCCCC
Confidence 8899999999999998753
No 162
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=4.5e-12 Score=109.24 Aligned_cols=119 Identities=18% Similarity=0.159 Sum_probs=110.6
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHhcCcchHHhhhhh
Q 010864 200 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS---PQALNNWGLALQELSAIVPAREKQTI 276 (498)
Q Consensus 200 ~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~---~~a~~~lg~~l~~~g~~~~a~~~~~~ 276 (498)
..+|.+...++.+|..+.. .|++++|+ ..|+++++++|++ ..+++++|.+|..+|++
T Consensus 22 ~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--------- 81 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFK----CGDYGGAL-------AAYTQALGLDATPQDQAVLHRNRAACHLKLEDY--------- 81 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHT----TTCHHHHH-------HHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCH---------
T ss_pred ccchHHHHHHHHHHHHHHH----hCCHHHHH-------HHHHHHHHHcccchHHHHHHHHHHHHHHHHccH---------
Confidence 3567899999999999999 99999999 6999999999998 89999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010864 277 VRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 356 (498)
Q Consensus 277 ~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~ 356 (498)
++|+.+|+++++++|++..+++++|.+|..+|+ +.+|..+|+++++++|++..+...+..
T Consensus 82 -~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (148)
T 2dba_A 82 -DKAETEASKAIEKDGGDVKALYRRSQALEKLGR-------------------LDQAVLDLQRCVSLEPKNKVFQEALRN 141 (148)
T ss_dssp -HHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred -HHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999877776655
Q ss_pred HH
Q 010864 357 VR 358 (498)
Q Consensus 357 ~~ 358 (498)
+.
T Consensus 142 ~~ 143 (148)
T 2dba_A 142 IS 143 (148)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 163
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.41 E-value=6e-12 Score=133.70 Aligned_cols=177 Identities=8% Similarity=-0.033 Sum_probs=149.7
Q ss_pred HHHHHHHHhhh-cc----------hhhHHhhccHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHhcCcCCCCCCCCchh
Q 010864 118 AAMELINSVTG-VD----------EEGRSRQRILTFAAKRYANAIERNPEDY-DALYNWALVLQESADNVSLDSTSPSKD 185 (498)
Q Consensus 118 ~A~~~~~~~~~-~~----------~~~~~~~g~~~~A~~~~~~al~~~P~~~-~a~~~lg~~~~~~g~~~~~~~~~~~~~ 185 (498)
+|...+.+++. .. ...+.+.|++++|+..|+++++++|.++ .+|.++|.++...|+
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~------------ 371 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG------------ 371 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC------------
Confidence 78888888875 33 1234567899999999999999999886 689999999998888
Q ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 010864 186 ALLEEACKKYDEATRLCPTLHDAFYNWAIA-ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQEL 264 (498)
Q Consensus 186 ~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~-~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~ 264 (498)
+++|+..|++|++..|.....+...+.+ +.. .|++++|. ..|+++++.+|+++.+|.+++.++...
T Consensus 372 --~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~----~~~~~~A~-------~~~e~al~~~p~~~~~~~~~~~~~~~~ 438 (530)
T 2ooe_A 372 --IKSGRMIFKKAREDARTRHHVYVTAALMEYYC----SKDKSVAF-------KIFELGLKKYGDIPEYVLAYIDYLSHL 438 (530)
T ss_dssp --HHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHH----TCCHHHHH-------HHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred --HHHHHHHHHHHHhccCCchHHHHHHHHHHHHH----cCChhHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHhC
Confidence 9999999999999988877777766655 335 88988888 688899999999999999999999999
Q ss_pred cCcchHHhhhhhHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHH
Q 010864 265 SAIVPAREKQTIVRTAISKFRAAIQLQFDFHR----AIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAA 340 (498)
Q Consensus 265 g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~----a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 340 (498)
|++ ++|...|++++...|.++. +|..........|+ ...+..++.++
T Consensus 439 g~~----------~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~-------------------~~~~~~~~~r~ 489 (530)
T 2ooe_A 439 NED----------NNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD-------------------LASILKVEKRR 489 (530)
T ss_dssp TCH----------HHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSC-------------------HHHHHHHHHHH
T ss_pred CCH----------hhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHH
Confidence 999 9999999999998766544 88888888888898 78889999999
Q ss_pred HhcCCCHH
Q 010864 341 HALKPSYS 348 (498)
Q Consensus 341 l~l~p~~~ 348 (498)
++..|++.
T Consensus 490 ~~~~p~~~ 497 (530)
T 2ooe_A 490 FTAFREEY 497 (530)
T ss_dssp HHHTHHHH
T ss_pred HHHCchhc
Confidence 99998644
No 164
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.40 E-value=4.5e-13 Score=112.44 Aligned_cols=107 Identities=10% Similarity=0.060 Sum_probs=91.9
Q ss_pred hhccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 136 RQRILTFAAKRYANAIER---NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~---~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
.+|++++|+.+|++++++ +|+++.+++++|.+|..+|+ +++|+..|+++++++|++..+++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~l 67 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGE--------------YRKAEAVLANGVKQFPNHQALRVFY 67 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCchHHHHHH
Confidence 368999999999999999 69999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 213 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 213 g~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
|.++.. +|++++|+ ..|+++++.+|+++........+....+.+
T Consensus 68 ~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~ai~~~~~~l 111 (117)
T 3k9i_A 68 AMVLYN----LGRYEQGV-------ELLLKIIAETSDDETIQSYKQAILFYADKL 111 (117)
T ss_dssp HHHHHH----HTCHHHHH-------HHHHHHHHHHCCCHHHHHTHHHHHHHTTCT
T ss_pred HHHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 999999 99999999 689999999999988766555554444433
No 165
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.39 E-value=1.1e-12 Score=107.22 Aligned_cols=107 Identities=19% Similarity=0.132 Sum_probs=101.8
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH
Q 010864 201 LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 280 (498)
Q Consensus 201 l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A 280 (498)
++|++..+++++|.++.. .|++++|+ ..|+++++++|.+..+++++|.++..+|++ ++|
T Consensus 1 l~p~~~~~~~~~~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~----------~~A 59 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYD----AGNYTESI-------DLFEKAIQLDPEESKYWLMKGKALYNLERY----------EEA 59 (112)
T ss_dssp CCCSSTTGGGGHHHHHHS----SCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred CCCCcHHHHHHHHHHHHH----hhhHHHHH-------HHHHHHHHhCcCCHHHHHHHHHHHHHccCH----------HHH
Confidence 468889999999999999 99999999 689999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHc-chhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 281 ISKFRAAIQLQFD--FHRAIYNLGTVLYGL-AEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 281 i~~~~~Al~l~P~--~~~a~~~Lg~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
+.+|++++++.|+ +..+++++|.++..+ |+ +.+|..++.+++...|.+
T Consensus 60 ~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~-------------------~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 60 VDCYNYVINVIEDEYNKDVWAAKADALRYIEGK-------------------EVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSC-------------------SHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHhCcccchHHHHHHHHHHHHHHhCC-------------------HHHHHHHHHHHhhcccCC
Confidence 9999999999999 999999999999999 98 899999999999998864
No 166
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.39 E-value=7.2e-12 Score=126.22 Aligned_cols=164 Identities=11% Similarity=-0.022 Sum_probs=138.8
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC---
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY-----DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL--- 205 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~-----~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~--- 205 (498)
+...|++++|+..+++++...|.+. .+++++|.++...|+ +++|+..|++++.+.+..
T Consensus 24 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~ 89 (373)
T 1hz4_A 24 AINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGE--------------LTRSLALMQQTEQMARQHDVW 89 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCc--------------HHHHHHHHHHHHHHHHhcCcH
Confidence 4568999999999999999987653 368899999999999 999999999999986543
Q ss_pred ---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 206 ---HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 206 ---~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
..+++++|.++.. +|++++|+..|++++..+++.-.. .|....++.++|.++...|++ ++|+
T Consensus 90 ~~~~~~~~~la~~~~~----~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~ 155 (373)
T 1hz4_A 90 HYALWSLIQQSEILFA----QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARL----------DEAE 155 (373)
T ss_dssp HHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred HHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCH----------HHHH
Confidence 2457899999999 999999998777777666543211 145677899999999999999 9999
Q ss_pred HHHHHHHHhcCC-----CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC
Q 010864 282 SKFRAAIQLQFD-----FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 344 (498)
Q Consensus 282 ~~~~~Al~l~P~-----~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~ 344 (498)
.+|++++++.+. ...++.++|.++...|+ +.+|..++++++.+.
T Consensus 156 ~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 156 ASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD-------------------LDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHH
Confidence 999999998765 35688999999999999 899999999998873
No 167
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.39 E-value=7.4e-13 Score=111.14 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010864 186 ALLEEACKKYDEATRL---CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262 (498)
Q Consensus 186 ~~~~~A~~~~~~Al~l---~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~ 262 (498)
|++++|+..|++++++ +|++..+++++|.+|.. +|++++|+ ..|+++++++|+++.+++++|.++.
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~ 72 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT----LGEYRKAE-------AVLANGVKQFPNHQALRVFYAMVLY 72 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCchHHHHHHHHHHH
Confidence 4499999999999999 69999999999999999 99999999 6999999999999999999999999
Q ss_pred HhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 010864 263 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL 308 (498)
Q Consensus 263 ~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~ 308 (498)
.+|++ ++|+..|++++++.|+++.+......+....
T Consensus 73 ~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~ 108 (117)
T 3k9i_A 73 NLGRY----------EQGVELLLKIIAETSDDETIQSYKQAILFYA 108 (117)
T ss_dssp HHTCH----------HHHHHHHHHHHHHHCCCHHHHHTHHHHHHHT
T ss_pred HcCCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 99999 9999999999999999998766555444433
No 168
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.37 E-value=7e-12 Score=105.89 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHhcCcchHHhhhhhHHHHHHH
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP---QALNNWGLALQELSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~---~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~ 283 (498)
.+++++|.++.. .|++++|+ ..|+++++.+|++. .+++++|.++...|++ ++|+..
T Consensus 3 ~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~----------~~A~~~ 61 (129)
T 2xev_A 3 RTAYNVAFDALK----NGKYDDAS-------QLFLSFLELYPNGVYTPNALYWLGESYYATRNF----------QLAEAQ 61 (129)
T ss_dssp CCHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCH----------HHHHHH
T ss_pred HHHHHHHHHHHH----hCCHHHHH-------HHHHHHHHHCCCCcccHHHHHHHHHHHHHhccH----------HHHHHH
Confidence 457899999999 99999999 68999999999988 8999999999999999 999999
Q ss_pred HHHHHHhcCCC---HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcc
Q 010864 284 FRAAIQLQFDF---HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVRSM 360 (498)
Q Consensus 284 ~~~Al~l~P~~---~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~~~ 360 (498)
|+++++..|++ +.+++++|.+|..+|+ +.+|..+|+++++..|++.....+...+..+
T Consensus 62 ~~~~~~~~p~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 62 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGK-------------------NTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHCTTSTTHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 99999999999 8999999999999999 9999999999999999999777766655543
No 169
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.37 E-value=7.1e-11 Score=124.10 Aligned_cols=150 Identities=19% Similarity=0.210 Sum_probs=113.0
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 212 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~l 212 (498)
.+++++|+.+|+++++. .++.+++++|.+|.. .++ +++|+..|+++++. ++..++++|
T Consensus 236 ~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d--------------~~~A~~~~~~a~~~--~~~~a~~~L 297 (490)
T 2xm6_A 236 TQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKE--------------PLKALEWYRKSAEQ--GNSDGQYYL 297 (490)
T ss_dssp CCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCC--------------HHHHHHHHHHHHTT--TCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCC--------------HHHHHHHHHHHHHc--CCHHHHHHH
Confidence 45666777777766654 456677777777766 555 88888888887654 567788888
Q ss_pred HHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHH
Q 010864 213 AIAISDRAKMR-----GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 213 g~~~~~~~~~~-----g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
|.+|.. . +++++|+ ..|+++++. +++.+++++|.+|...|. .+++++|+.+|+++
T Consensus 298 g~~y~~----~~~g~~~~~~~A~-------~~~~~a~~~--~~~~a~~~lg~~y~~~g~-------~~~~~~A~~~~~~a 357 (490)
T 2xm6_A 298 AHLYDK----GAEGVAKNREQAI-------SWYTKSAEQ--GDATAQANLGAIYFRLGS-------EEEHKKAVEWFRKA 357 (490)
T ss_dssp HHHHHH----CBTTBCCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHHSCC-------HHHHHHHHHHHHHH
T ss_pred HHHHHc----CCCCCcCCHHHHH-------HHHHHHHhc--CCHHHHHHHHHHHHhCCC-------cccHHHHHHHHHHH
Confidence 888877 6 7777777 566666655 467888888888887652 12449999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCC
Q 010864 288 IQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 345 (498)
Q Consensus 288 l~l~P~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p 345 (498)
++. +++.++++||.+|.. .++ +.+|..+|+++.+...
T Consensus 358 ~~~--~~~~a~~~Lg~~y~~g~g~~~~-------------------~~~A~~~~~~A~~~~~ 398 (490)
T 2xm6_A 358 AAK--GEKAAQFNLGNALLQGKGVKKD-------------------EQQAAIWMRKAAEQGL 398 (490)
T ss_dssp HHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHHHHHHHHHTTC
T ss_pred HHC--CCHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHhCCC
Confidence 987 679999999999988 555 8999999999998754
No 170
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.36 E-value=3.3e-11 Score=117.78 Aligned_cols=149 Identities=10% Similarity=0.019 Sum_probs=117.5
Q ss_pred hhcHHHHHHHHHHhhhcc----------------hhhHHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 010864 113 AEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQE 170 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~ 170 (498)
.+++++|+..+...+... +..+...|++++|+.+|++++.+.+.. ..+++++|.+|..
T Consensus 88 ~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 456666666665544322 122456789999999999999876544 6799999999999
Q ss_pred hcCcCCCCCCCCchhhhHHHHHHHHHHHHH---hCCCCH----HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 010864 171 SADNVSLDSTSPSKDALLEEACKKYDEATR---LCPTLH----DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 243 (498)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~---l~p~~~----~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~A 243 (498)
+|+ +++|+..|++++. ..|++. .+++++|.+|.. +|++++|++.|++|+.....
T Consensus 168 ~~~--------------~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~Al~~~~kal~~~~~- 228 (293)
T 2qfc_A 168 NGY--------------LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEISCR- 228 (293)
T ss_dssp TTC--------------HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH-
T ss_pred cCC--------------HHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH----HhhHHHHHHHHHHHHHHHHh-
Confidence 999 9999999999994 466643 689999999999 99999999877777666532
Q ss_pred HhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH-HHHHHHHHHh
Q 010864 244 VQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA-ISKFRAAIQL 290 (498)
Q Consensus 244 l~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A-i~~~~~Al~l 290 (498)
.........+++++|.+|..+|++ ++| ..+|++|+.+
T Consensus 229 ~~~~~~~~~~~~~lg~~y~~~g~~----------~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 229 INSMALIGQLYYQRGECLRKLEYE----------EAEIEDAYKKASFF 266 (293)
T ss_dssp TTBCSSHHHHHHHHHHHHHHTTCC----------HHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCc----------HHHHHHHHHHHHHH
Confidence 122222478999999999999999 999 7889999976
No 171
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.35 E-value=3.3e-11 Score=125.76 Aligned_cols=163 Identities=14% Similarity=0.094 Sum_probs=127.1
Q ss_pred HHhhc---cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh----cCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCH
Q 010864 134 RSRQR---ILTFAAKRYANAIERNPEDYDALYNWALVLQES----ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH 206 (498)
Q Consensus 134 ~~~~g---~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~----g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 206 (498)
+...| ++++|+..|+++++..+..+..++++|.+|... ++ +++|+.+|+++. |+++
T Consensus 186 ~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d--------------~~~A~~~~~~aa---~g~~ 248 (452)
T 3e4b_A 186 YQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPD--------------EKTAQALLEKIA---PGYP 248 (452)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCC--------------HHHHHHHHHHHG---GGST
T ss_pred HHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCC--------------HHHHHHHHHHHc---CCCH
Confidence 34456 999999999999999999999999999999654 34 999999999997 8999
Q ss_pred HHHHHHHHHHH---HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHH
Q 010864 207 DAFYNWAIAIS---DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 207 ~a~~~lg~~~~---~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~ 283 (498)
.++++||.+|. . .+++++|+ .+|+++.+. +++.++++||.+|. .|.- ...++++|+.+
T Consensus 249 ~a~~~Lg~~~~~~~~----~~d~~~A~-------~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g-----~~~d~~~A~~~ 309 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPE----LGDVEQMM-------KYLDNGRAA--DQPRAELLLGKLYY-EGKW-----VPADAKAAEAH 309 (452)
T ss_dssp HHHHHHHHHHHHSGG----GCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHH-HCSS-----SCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCC----CCCHHHHH-------HHHHHHHHC--CCHHHHHHHHHHHH-cCCC-----CCCCHHHHHHH
Confidence 99999999943 4 78888888 577777754 58999999999998 5610 11233999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHH
Q 010864 284 FRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 350 (498)
Q Consensus 284 ~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~ 350 (498)
|++|. ++++.++++||.+|.. |. +. ...+.+|..+|+++.+.......+
T Consensus 310 ~~~Aa---~g~~~A~~~Lg~~y~~-G~-----g~---------~~d~~~A~~~~~~Aa~~g~~~A~~ 358 (452)
T 3e4b_A 310 FEKAV---GREVAADYYLGQIYRR-GY-----LG---------KVYPQKALDHLLTAARNGQNSADF 358 (452)
T ss_dssp HHTTT---TTCHHHHHHHHHHHHT-TT-----TS---------SCCHHHHHHHHHHHHTTTCTTHHH
T ss_pred HHHHh---CCCHHHHHHHHHHHHC-CC-----CC---------CcCHHHHHHHHHHHHhhChHHHHH
Confidence 99998 9999999999988876 32 00 011678888888887765444433
No 172
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.35 E-value=7.2e-12 Score=127.46 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=105.6
Q ss_pred hHHhhccHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHH
Q 010864 133 GRSRQRILTFAAKRYANAIE----------------RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYD 196 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~----------------~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 196 (498)
.+.+.|++++|+..|+++++ ++|.+..+|+++|.+|..+|+ +++|+.+|+
T Consensus 232 ~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~~~ 297 (370)
T 1ihg_A 232 TFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSD--------------WQGAVDSCL 297 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccC--------------HHHHHHHHH
Confidence 36789999999999999999 788889999999999999999 999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 197 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 197 ~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
++++++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++..++.++..++++
T Consensus 298 ~al~~~p~~~~a~~~lg~~~~~----~g~~~eA~-------~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 298 EALEIDPSNTKALYRRAQGWQG----LKEYDQAL-------ADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCchhHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999 699999999999999999999999999988
No 173
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.33 E-value=3e-11 Score=121.64 Aligned_cols=143 Identities=14% Similarity=0.003 Sum_probs=112.5
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-----
Q 010864 134 RSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC----- 202 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~----- 202 (498)
+...|++++|+..|++++.+.+.. ..+++++|.++..+|+ +++|+..|++++++.
T Consensus 63 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~--------------~~~A~~~~~~al~~~~~~~~ 128 (373)
T 1hz4_A 63 LHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGF--------------LQTAWETQEKAFQLINEQHL 128 (373)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHHHHhcc
Confidence 566899999999999999876543 2447899999999999 999999999999985
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHhcCcchHHhhh
Q 010864 203 ---PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-----SPQALNNWGLALQELSAIVPAREKQ 274 (498)
Q Consensus 203 ---p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~-----~~~a~~~lg~~l~~~g~~~~a~~~~ 274 (498)
|....++.++|.++.. +|++++|+. .|++++.+.+. ...++.++|.++...|++
T Consensus 129 ~~~~~~~~~~~~la~~~~~----~g~~~~A~~-------~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~------- 190 (373)
T 1hz4_A 129 EQLPMHEFLVRIRAQLLWA----WARLDEAEA-------SARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDL------- 190 (373)
T ss_dssp TTSTHHHHHHHHHHHHHHH----TTCHHHHHH-------HHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCH-------
T ss_pred ccCcHHHHHHHHHHHHHHH----hcCHHHHHH-------HHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCH-------
Confidence 3456788999999999 999999995 66666666553 457899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCC--CHHHHH-----HHHHHHHHcchh
Q 010864 275 TIVRTAISKFRAAIQLQFD--FHRAIY-----NLGTVLYGLAED 311 (498)
Q Consensus 275 ~~~~~Ai~~~~~Al~l~P~--~~~a~~-----~Lg~~~~~~g~~ 311 (498)
++|+.++++++++.+. ++..+. .++.++...|+.
T Consensus 191 ---~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 231 (373)
T 1hz4_A 191 ---DNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDK 231 (373)
T ss_dssp ---HHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred ---HHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCH
Confidence 9999999998887432 211111 234456677764
No 174
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.33 E-value=8.4e-12 Score=108.30 Aligned_cols=140 Identities=15% Similarity=0.085 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
..++..+|.++...|+ +++|+..|++++++.+.. ..+++++|.++.. +|++++|+.
T Consensus 9 ~~~~~~l~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~ 70 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF----LGEFETASE 70 (164)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH----cCCHHHHHH
Confidence 5678999999999999 999999999999986542 2589999999999 999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcC------CCHHHHHHHHHHH
Q 010864 232 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF------DFHRAIYNLGTVL 305 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P------~~~~a~~~Lg~~~ 305 (498)
.|++++..+.+. ...+....+++++|.++..+|++ ++|+.+|++++++.+ ....++.++|.++
T Consensus 71 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 139 (164)
T 3ro3_A 71 YYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 139 (164)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHH
Confidence 777776665542 11112367899999999999999 999999999998843 2357899999999
Q ss_pred HHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCC
Q 010864 306 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 345 (498)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p 345 (498)
..+|+ +.+|..++++++++..
T Consensus 140 ~~~g~-------------------~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 140 TALGN-------------------HDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHTC-------------------HHHHHHHHHHHHHHHT
T ss_pred HHccC-------------------HHHHHHHHHHHHHHHH
Confidence 99999 8999999999987643
No 175
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.32 E-value=9.1e-12 Score=121.84 Aligned_cols=149 Identities=10% Similarity=-0.006 Sum_probs=114.5
Q ss_pred hhcHHHHHHHHHHhhhcc----------------hhhHHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 010864 113 AEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQE 170 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~----------------~~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~ 170 (498)
.+++++|...+.++.... +..+...+++++|+.+|++++.+.+.. ..+++++|.+|..
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 355666666666554422 112345679999999999999975443 3479999999999
Q ss_pred hcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 010864 171 SADNVSLDSTSPSKDALLEEACKKYDEATRL-------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 243 (498)
Q Consensus 171 ~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-------~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~A 243 (498)
+|+ +++|+.+|++++++ .+....+++|+|.+|.. +|++++|++.+++|+....+.
T Consensus 168 ~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 168 NGY--------------LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp TTC--------------HHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCC--------------HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHc
Confidence 999 99999999999964 22245689999999999 999999997666665544321
Q ss_pred HhcCCCCHHHHHHHHHHHHHhc-CcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 244 VQLNWNSPQALNNWGLALQELS-AIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 244 l~l~P~~~~a~~~lg~~l~~~g-~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
...+..+.+++++|.+|..+| .+ ++|+.+|++|+.+
T Consensus 230 -~~~~~~~~~~~~lg~~~~~~g~~~----------~~A~~~~~~Al~i 266 (293)
T 3u3w_A 230 -NSMALIGQLYYQRGECLRKLEYEE----------AEIEDAYKKASFF 266 (293)
T ss_dssp -TBCTTHHHHHHHHHHHHHHTTCCH----------HHHHHHHHHHHHH
T ss_pred -CcHHHHHHHHHHHHHHHHHhCCcH----------HHHHHHHHHHHHH
Confidence 222334899999999999999 57 9999999999986
No 176
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.32 E-value=2.6e-11 Score=101.63 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHH
Q 010864 204 TLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 204 ~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~ 283 (498)
..+..++.+|.++.. .|++++|+ ..|++++..+|++..+++++|.++...|++ ++|+.+
T Consensus 2 ~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~ 60 (131)
T 1elr_A 2 KQALKEKELGNDAYK----KKDFDTAL-------KHYDKAKELDPTNMTYITNQAAVYFEKGDY----------NKCREL 60 (131)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH----------HHHHHH
T ss_pred hHHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHhcCCccHHHHHHHHHHHHHhccH----------HHHHHH
Confidence 346789999999999 99999999 688999999999999999999999999999 999999
Q ss_pred HHHHHHhcCCC-------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 284 FRAAIQLQFDF-------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 284 ~~~Al~l~P~~-------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
|++++.+.|++ ..+++++|.+|..+|+ +..|..+|++++.+.|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~ 113 (131)
T 1elr_A 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEK-------------------YKDAIHFYNKSLAEHRTPD 113 (131)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHhhccccchhHHHHHHHHHHHHHHHHHhcc-------------------HHHHHHHHHHHHHhCCCHH
Confidence 99999999887 9999999999999999 9999999999999999643
No 177
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.30 E-value=1.9e-11 Score=106.09 Aligned_cols=131 Identities=12% Similarity=-0.006 Sum_probs=110.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC--
Q 010864 134 RSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-- 205 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~-- 205 (498)
+...|++++|+.+|++++++.+.. ..++.++|.++..+|+ +++|+..|++++.+.+..
T Consensus 19 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~a~~~~~~~~~ 84 (164)
T 3ro3_A 19 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGE--------------FETASEYYKKTLLLARQLKD 84 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHHhCC
Confidence 677899999999999999886543 2589999999999999 999999999999986543
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 206 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 206 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
..+++++|.++.. +|++++|++.+++++..+++. ...+....++.++|.++..+|++ ++|+
T Consensus 85 ~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~~A~ 149 (164)
T 3ro3_A 85 RAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLAIAQEL-KDRIGEGRACWSLGNAYTALGNH----------DQAM 149 (164)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTCH----------HHHH
T ss_pred cHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHc-cchHhHHHHHHHHHHHHHHccCH----------HHHH
Confidence 6789999999999 999999998777777665432 11123467899999999999999 9999
Q ss_pred HHHHHHHHhcCC
Q 010864 282 SKFRAAIQLQFD 293 (498)
Q Consensus 282 ~~~~~Al~l~P~ 293 (498)
.+|++++++...
T Consensus 150 ~~~~~a~~~~~~ 161 (164)
T 3ro3_A 150 HFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999999988654
No 178
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.26 E-value=6.6e-11 Score=98.45 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcch
Q 010864 190 EACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVP 269 (498)
Q Consensus 190 ~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~ 269 (498)
+|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++++|++..+++++|.+|..+|++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~-- 69 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAE----HEQFDAAL-------PHLRAALDFDPTYSVAWKWLGKTLQGQGDR-- 69 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH--
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHcCCH--
Confidence 58899999999999999999999999999 99999999 699999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHcch
Q 010864 270 AREKQTIVRTAISKFRAAIQLQFD--FHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 270 a~~~~~~~~~Ai~~~~~Al~l~P~--~~~a~~~Lg~~~~~~g~ 310 (498)
++|+.+|++++++.|+ +......+...+..+++
T Consensus 70 --------~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 70 --------AGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp --------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 9999999999999874 56677777777777665
No 179
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.25 E-value=1.8e-11 Score=118.86 Aligned_cols=134 Identities=12% Similarity=0.013 Sum_probs=117.9
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC--HHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL--HDAFYN 211 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~--~~a~~~ 211 (498)
+...|+|++|.+.|+.++..+|++. +++.+|.++++.++ +++|+..|++++...+.. ..++++
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r--------------~~dA~~~l~~a~~~~d~~~~~~a~~~ 176 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAER--------------WTDVIDQVKSAGKWPDKFLAGAAGVA 176 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTC--------------HHHHHHHHTTGGGCSCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCC--------------HHHHHHHHHHhhccCCcccHHHHHHH
Confidence 4558999999999999999999999 99999999999999 999999999887764222 458999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHH
Q 010864 212 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN--WN-SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAI 288 (498)
Q Consensus 212 lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~--P~-~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al 288 (498)
+|.++.. +|++++|+ .+|++++.-. |. ...+++++|.++.++|+. ++|+..|++++
T Consensus 177 LG~al~~----LG~~~eAl-------~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~----------deA~~~l~~a~ 235 (282)
T 4f3v_A 177 HGVAAAN----LALFTEAE-------RRLTEANDSPAGEACARAIAWYLAMARRSQGNE----------SAAVALLEWLQ 235 (282)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH----------HHHHHHHHHHH
T ss_pred HHHHHHH----CCCHHHHH-------HHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHH
Confidence 9999999 99999999 6888887544 66 678999999999999999 99999999999
Q ss_pred HhcCCCHHHHHHHHHH
Q 010864 289 QLQFDFHRAIYNLGTV 304 (498)
Q Consensus 289 ~l~P~~~~a~~~Lg~~ 304 (498)
..+|+ ..++..|...
T Consensus 236 a~~P~-~~~~~aL~~~ 250 (282)
T 4f3v_A 236 TTHPE-PKVAAALKDP 250 (282)
T ss_dssp HHSCC-HHHHHHHHCT
T ss_pred hcCCc-HHHHHHHhCC
Confidence 99999 8877776543
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.25 E-value=4.8e-11 Score=108.62 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=108.7
Q ss_pred hHHhhccHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh---CC
Q 010864 133 GRSRQRILTFAAKRYANAIE------RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---CP 203 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~------~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---~p 203 (498)
.+...|++++|+.+|++++. ..+....+++++|.+|..+|+ +++|+..|++++.+ .+
T Consensus 35 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~ 100 (203)
T 3gw4_A 35 VYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN--------------WDAARRCFLEERELLASLP 100 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHHcC
Confidence 36678999999999999999 445567899999999999999 99999999999999 44
Q ss_pred C----CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHH
Q 010864 204 T----LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRT 279 (498)
Q Consensus 204 ~----~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~ 279 (498)
+ ...+++++|.++.. +|++++|+..+++++...++.- .......++.++|.++..+|++ ++
T Consensus 101 ~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~----------~~ 165 (203)
T 3gw4_A 101 EDPLAASANAYEVATVALH----FGDLAGARQEYEKSLVYAQQAD-DQVAIACAFRGLGDLAQQEKNL----------LE 165 (203)
T ss_dssp CCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCH----------HH
T ss_pred ccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHCcCH----------HH
Confidence 3 35679999999999 9999999987777766544211 0011245679999999999999 99
Q ss_pred HHHHHHHHHHhcCC
Q 010864 280 AISKFRAAIQLQFD 293 (498)
Q Consensus 280 Ai~~~~~Al~l~P~ 293 (498)
|+.+|++++++...
T Consensus 166 A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 166 AQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998543
No 181
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.24 E-value=6.8e-11 Score=98.35 Aligned_cols=101 Identities=13% Similarity=0.181 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 010864 142 FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAK 221 (498)
Q Consensus 142 ~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~ 221 (498)
+|+..|+++++.+|+++.+++++|.+|...|+ +++|+..|+++++++|++..+|+++|.++..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~--- 65 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQ--------------FDAALPHLRAALDFDPTYSVAWKWLGKTLQG--- 65 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH---
Confidence 58899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhcCc
Q 010864 222 MRGRTKEAEELWKQATKNYEKAVQLNW--NSPQALNNWGLALQELSAI 267 (498)
Q Consensus 222 ~~g~~~eA~~~~~~Al~~~~~Al~l~P--~~~~a~~~lg~~l~~~g~~ 267 (498)
+|++++|+ ..|+++++++| .+..+...+...+..+++.
T Consensus 66 -~g~~~~A~-------~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 66 -QGDRAGAR-------QAWESGLAAAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp -HTCHHHHH-------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHH-------HHHHHHHHhccccccHHHHHHHHHHHHHhccc
Confidence 99999999 57777777666 3556667777766666543
No 182
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.24 E-value=9.7e-12 Score=101.94 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 236 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 236 (498)
++.+|+++|.++...|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~------ 58 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGL--------------YREAVHCYDQLITAQPQNPVGYSNKAMALIK----LGEYTQAI------ 58 (111)
T ss_dssp HHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH------
T ss_pred hHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCHHHHH------
Confidence 46789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCCCC------HHHHHHHHHHHHHhcCc
Q 010864 237 TKNYEKAVQLNWNS------PQALNNWGLALQELSAI 267 (498)
Q Consensus 237 l~~~~~Al~l~P~~------~~a~~~lg~~l~~~g~~ 267 (498)
..|+++++++|++ ..+++++|.++..+|++
T Consensus 59 -~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 59 -QMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSV 94 (111)
T ss_dssp -HHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhH
Confidence 6999999999999 99999999999999998
No 183
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.22 E-value=1.5e-10 Score=120.72 Aligned_cols=158 Identities=16% Similarity=0.064 Sum_probs=126.4
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc---CcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010864 139 ILTFAAKRYANAIERNPEDYDALYNWALVLQESA---DNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 215 (498)
Q Consensus 139 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g---~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~ 215 (498)
..+.+..+++.+...+|. +++++|.+|...| + +++|+..|+++.+.++..+..+++||.+
T Consensus 160 ~~~~a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~~~~--------------~~~A~~~~~~aa~~g~~~a~~~~~Lg~~ 222 (452)
T 3e4b_A 160 HLDDVERICKAALNTTDI---CYVELATVYQKKQQPEQ--------------QAELLKQMEAGVSRGTVTAQRVDSVARV 222 (452)
T ss_dssp GHHHHHHHHHHHTTTCTT---HHHHHHHHHHHTTCHHH--------------HHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHH---HHHHHHHHHHHcCCccc--------------HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 455566666666665555 9999999999988 6 9999999999999999999999999999
Q ss_pred HHHHHHHc----CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH---HhcCcchHHhhhhhHHHHHHHHHHHH
Q 010864 216 ISDRAKMR----GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ---ELSAIVPAREKQTIVRTAISKFRAAI 288 (498)
Q Consensus 216 ~~~~~~~~----g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~---~~g~~~~a~~~~~~~~~Ai~~~~~Al 288 (498)
|.. . +++++|+ .+|+++. |+++.++++||.+|. ..+++ ++|+.+|++++
T Consensus 223 y~~----g~~~~~d~~~A~-------~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~----------~~A~~~~~~Aa 278 (452)
T 3e4b_A 223 LGD----ATLGTPDEKTAQ-------ALLEKIA---PGYPASWVSLAQLLYDFPELGDV----------EQMMKYLDNGR 278 (452)
T ss_dssp HTC----GGGSSCCHHHHH-------HHHHHHG---GGSTHHHHHHHHHHHHSGGGCCH----------HHHHHHHHHHH
T ss_pred HhC----CCCCCCCHHHHH-------HHHHHHc---CCCHHHHHHHHHHHHhCCCCCCH----------HHHHHHHHHHH
Confidence 976 4 6888888 6888887 899999999999944 45565 99999999998
Q ss_pred HhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 289 QLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 357 (498)
Q Consensus 289 ~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~ 357 (498)
+. +++.++++||.+|. .|. +.. ..+.+|..+|.++. +++......+..+
T Consensus 279 ~~--g~~~A~~~Lg~~y~-~G~-----g~~---------~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~ 327 (452)
T 3e4b_A 279 AA--DQPRAELLLGKLYY-EGK-----WVP---------ADAKAAEAHFEKAV---GREVAADYYLGQI 327 (452)
T ss_dssp HT--TCHHHHHHHHHHHH-HCS-----SSC---------CCHHHHHHHHHTTT---TTCHHHHHHHHHH
T ss_pred HC--CCHHHHHHHHHHHH-cCC-----CCC---------CCHHHHHHHHHHHh---CCCHHHHHHHHHH
Confidence 54 58999999999998 552 000 01789999999988 6666555555443
No 184
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.22 E-value=9.5e-10 Score=125.11 Aligned_cols=212 Identities=14% Similarity=0.032 Sum_probs=152.5
Q ss_pred hhhcHHHHHHHHHHhhhcch--hhHH-hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhH
Q 010864 112 LAEQNNAAMELINSVTGVDE--EGRS-RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALL 188 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~~--~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~ 188 (498)
..+.+++|..+|.++..... ..+. ..+++++|+++++++ +.+.+|+++|.++...|+ +
T Consensus 1061 ~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aerv-----n~p~vWsqLAKAql~~G~--------------~ 1121 (1630)
T 1xi4_A 1061 SNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGM--------------V 1121 (1630)
T ss_pred hCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhc-----CCHHHHHHHHHHHHhCCC--------------H
Confidence 45778888888888764432 1122 456777777776654 779999999999999999 9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------------HHHHHhc
Q 010864 189 EEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN----------------------YEKAVQL 246 (498)
Q Consensus 189 ~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~----------------------~~~Al~l 246 (498)
++|+.+|.+| +++..|.++|.++.+ .|++++|++.|..|++. ++..+
T Consensus 1122 kEAIdsYiKA-----dD~say~eVa~~~~~----lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI-- 1190 (1630)
T 1xi4_A 1122 KEAIDSYIKA-----DDPSSYMEVVQAANT----SGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFI-- 1190 (1630)
T ss_pred HHHHHHHHhc-----CChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHH--
Confidence 9999999887 899999999999999 99999999888665521 11111
Q ss_pred CCCCHHHHHHHHHHHHHhcCcchH----------------HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 247 NWNSPQALNNWGLALQELSAIVPA----------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 247 ~P~~~~a~~~lg~~l~~~g~~~~a----------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+..+...+.++|..+...|+|++| +.+.|++++|++++++| ++..+|.+.+.++...|+
T Consensus 1191 ~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~acve~~E 1265 (1630)
T 1xi4_A 1191 NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKE 1265 (1630)
T ss_pred hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHHhhhhH
Confidence 233456677899999999999887 44678899999999988 556788877777766655
Q ss_pred hHHhccCCC----CCCC-------CChhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010864 311 DTLRTGGTV----NPRE-------VSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 358 (498)
Q Consensus 311 ~~~~~~~~~----~~~~-------~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~ 358 (498)
...+...-+ .+.. ......+++|+.++++++.+++.+..+..-+..+.
T Consensus 1266 f~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLy 1324 (1630)
T 1xi4_A 1266 FRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY 1324 (1630)
T ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHH
Confidence 322221111 1100 11112478999999999999998886554444443
No 185
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.20 E-value=1.5e-10 Score=91.26 Aligned_cols=85 Identities=32% Similarity=0.411 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 235 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 235 (498)
.++.+++.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. .|++++|+
T Consensus 7 ~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~----- 63 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAI----- 63 (91)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred ccHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HhhHHHHH-----
Confidence 467899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhc
Q 010864 236 ATKNYEKAVQLNWNSPQALNNWGLALQELS 265 (498)
Q Consensus 236 Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g 265 (498)
..|+++++++|++..++.++|.++..+|
T Consensus 64 --~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 64 --EYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp --HHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 6999999999999999999999998765
No 186
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.19 E-value=1.3e-10 Score=91.49 Aligned_cols=85 Identities=28% Similarity=0.325 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHH
Q 010864 204 TLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 204 ~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~ 283 (498)
.+..+++++|.++.. .|++++|+ ..|+++++++|++..+++++|.++...|++ ++|+.+
T Consensus 7 ~~~~~~~~la~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~ 65 (91)
T 1na3_A 7 NSAEAWYNLGNAYYK----QGDYDEAI-------EYYQKALELDPNNAEAWYNLGNAYYKQGDY----------DEAIEY 65 (91)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHH
T ss_pred ccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHHhhH----------HHHHHH
Confidence 357899999999999 99999999 689999999999999999999999999999 999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 284 FRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 284 ~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
|+++++++|++..++.++|.++..+|
T Consensus 66 ~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 66 YQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999998764
No 187
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.19 E-value=8.5e-11 Score=123.67 Aligned_cols=130 Identities=12% Similarity=-0.046 Sum_probs=114.0
Q ss_pred HHhhccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh----
Q 010864 134 RSRQRILTFAAKRYANAIERN-----PED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---- 201 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~-----P~~---~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---- 201 (498)
+..+|+|++|+..|+++|++. |++ ...+++||.+|..+|+ |++|+..|+++|++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQA--------------YEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHHH
Confidence 456899999999999999863 444 5679999999999999 99999999999987
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCcchHHhhhhh
Q 010864 202 ----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELSAIVPAREKQTI 276 (498)
Q Consensus 202 ----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~-P~~~~a~~~lg~~l~~~g~~~~a~~~~~~ 276 (498)
+|+.+..++|||.+|.. +|++++|+.+|++|++.+++.+.-+ |.......+++.++.+++.+
T Consensus 385 lG~~Hp~~a~~l~nLa~~~~~----~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~--------- 451 (490)
T 3n71_A 385 YHHNNAQLGMAVMRAGLTNWH----AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMF--------- 451 (490)
T ss_dssp SCTTCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHH---------
T ss_pred cCCCCHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH---------
Confidence 45556789999999999 9999999999999999999988544 66677889999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 010864 277 VRTAISKFRAAIQLQ 291 (498)
Q Consensus 277 ~~~Ai~~~~~Al~l~ 291 (498)
++|...|+++.+..
T Consensus 452 -~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 452 -RQNEFMYHKMREAA 465 (490)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHH
Confidence 99999999987643
No 188
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.16 E-value=1.9e-09 Score=107.81 Aligned_cols=165 Identities=14% Similarity=0.006 Sum_probs=130.1
Q ss_pred HHHHHhCCCCHHHH--HHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCC
Q 010864 148 ANAIERNPEDYDAL--YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGR 225 (498)
Q Consensus 148 ~~al~~~P~~~~a~--~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~ 225 (498)
+++...-|.+.++| +..|..+...+. ...+.+|+.+|++|++++|+++.+|-.++.+|..++...+.
T Consensus 184 ~r~~~~~p~~~~Aydl~Lra~~~l~~~~-----------~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~ 252 (372)
T 3ly7_A 184 ETLQKILPHRGALLTNFYQAHDYLLHGD-----------DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPL 252 (372)
T ss_dssp HHHHHHSCSSGGGHHHHHHHHHHHHHCS-----------HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCC
Confidence 34556678877665 566777766544 23489999999999999999999999999999754333323
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 226 TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305 (498)
Q Consensus 226 ~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~ 305 (498)
.......+.+++.. ..++..+|.++.++.-++.++...|++ ++|+..+++|++++|+ ..++..+|.++
T Consensus 253 ~~~~~~~l~~a~~a-~~a~~~~~~~a~~~~alal~~l~~gd~----------d~A~~~l~rAl~Ln~s-~~a~~llG~~~ 320 (372)
T 3ly7_A 253 DEKQLAALNTEIDN-IVTLPELNNLSIIYQIKAVSALVKGKT----------DESYQAINTGIDLEMS-WLNYVLLGKVY 320 (372)
T ss_dssp CHHHHHHHHHHHHH-HHTCGGGTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCCC-HHHHHHHHHHH
T ss_pred chhhHHHHHHHHHH-HHhcccCCcCHHHHHHHHHHHHhCCCH----------HHHHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 23333334444442 235578899999999999999999999 9999999999999975 77889999999
Q ss_pred HHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010864 306 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSAL 354 (498)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~~l 354 (498)
...|+ +.+|.+.|.+|+.++|....|...-
T Consensus 321 ~~~G~-------------------~~eA~e~~~~AlrL~P~~~t~~~~~ 350 (372)
T 3ly7_A 321 EMKGM-------------------NREAADAYLTAFNLRPGANTLYWIE 350 (372)
T ss_dssp HHTTC-------------------HHHHHHHHHHHHHHSCSHHHHHHHH
T ss_pred HHCCC-------------------HHHHHHHHHHHHhcCCCcChHHHHh
Confidence 99999 9999999999999999998655443
No 189
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.15 E-value=1.7e-10 Score=121.31 Aligned_cols=132 Identities=12% Similarity=-0.049 Sum_probs=112.0
Q ss_pred HHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010864 163 NWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 234 (498)
Q Consensus 163 ~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--------~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~ 234 (498)
..+..+..+|+ |++|+..|+++|++ +|+.+..++|||.+|.. +|+|++|+.+++
T Consensus 314 e~a~~~~~qg~--------------~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~ 375 (490)
T 3n71_A 314 EKIDKARSEGL--------------YHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY----LQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHTTTC--------------HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHH
T ss_pred HHHHHHHhCCC--------------HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----hcCHHHHHHHHH
Confidence 34455677888 99999999999997 34456789999999999 999999999999
Q ss_pred HHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh-----cCCC---HHHHHHHHHHH
Q 010864 235 QATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDF---HRAIYNLGTVL 305 (498)
Q Consensus 235 ~Al~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-----~P~~---~~a~~~Lg~~~ 305 (498)
+++..+++.+.- +|+-+..++|||.+|..+|++ ++|+.+|++|+++ .|++ .....+|+.++
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 445 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHI----------EVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTE 445 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 999999998844 377788999999999999999 9999999999987 3555 56678899999
Q ss_pred HHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHH
Q 010864 306 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAH 341 (498)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 341 (498)
..++. |.+|...|.++.
T Consensus 446 ~e~~~-------------------~~~ae~~~~~~~ 462 (490)
T 3n71_A 446 MELRM-------------------FRQNEFMYHKMR 462 (490)
T ss_dssp HHHHH-------------------HHHHHHHHHHHH
T ss_pred HHHHH-------------------HHHHHHHHHHHH
Confidence 99988 777777777764
No 190
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.14 E-value=1.3e-09 Score=107.03 Aligned_cols=164 Identities=12% Similarity=-0.024 Sum_probs=135.2
Q ss_pred HHhhccHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC----CHH
Q 010864 134 RSRQRILTFAAKRYANAIERNP--EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT----LHD 207 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P--~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~----~~~ 207 (498)
+...|++++|+..+.+.+..+| ++.+++..++.+|..+|+ ++.|.+.++++.+.+|+ +-.
T Consensus 110 ~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r--------------~d~A~k~l~~~~~~~~d~~~~~d~ 175 (310)
T 3mv2_B 110 QAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNN--------------VSTASTIFDNYTNAIEDTVSGDNE 175 (310)
T ss_dssp HHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhcCccccccchH
Confidence 5568999999999999999997 899999999999999999 99999999999999994 335
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHH
Q 010864 208 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFR 285 (498)
Q Consensus 208 a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~ 285 (498)
...+|+.++..++...+++.+|. ..|+++.+..|+ ....+.+ ++..+|++ ++|...++
T Consensus 176 ~l~~Laea~v~l~~g~~~~q~A~-------~~f~El~~~~p~~~~~~lLln---~~~~~g~~----------~eAe~~L~ 235 (310)
T 3mv2_B 176 MILNLAESYIKFATNKETATSNF-------YYYEELSQTFPTWKTQLGLLN---LHLQQRNI----------AEAQGIVE 235 (310)
T ss_dssp HHHHHHHHHHHHHHTCSTTTHHH-------HHHHHHHTTSCSHHHHHHHHH---HHHHHTCH----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHH-------HHHHHHHHhCCCcccHHHHHH---HHHHcCCH----------HHHHHHHH
Confidence 55666655443222233888888 689998888887 3445555 89999999 99999999
Q ss_pred HHHHh----------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHHHHHH
Q 010864 286 AAIQL----------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSS 352 (498)
Q Consensus 286 ~Al~l----------~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~~~~ 352 (498)
+++++ +|+++.++.|+..+...+|+ .+..++.++.++.|+++....
T Consensus 236 ~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk---------------------~a~~l~~qL~~~~P~hp~i~d 291 (310)
T 3mv2_B 236 LLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL---------------------DTEDLTNQLVKLDHEHAFIKH 291 (310)
T ss_dssp HHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC---------------------TTHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh---------------------HHHHHHHHHHHhCCCChHHHH
Confidence 88887 58999999999999999985 457889999999999994433
No 191
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.6e-10 Score=93.22 Aligned_cols=85 Identities=15% Similarity=0.181 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHH
Q 010864 205 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 284 (498)
Q Consensus 205 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~ 284 (498)
++.+++++|.++.. .|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|+.+|
T Consensus 3 ~~~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~ 61 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK----QGLYREAV-------HCYDQLITAQPQNPVGYSNKAMALIKLGEY----------TQAIQMC 61 (111)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHhcCH----------HHHHHHH
Confidence 46789999999999 99999999 699999999999999999999999999999 9999999
Q ss_pred HHHHHhcCCC------HHHHHHHHHHHHHcch
Q 010864 285 RAAIQLQFDF------HRAIYNLGTVLYGLAE 310 (498)
Q Consensus 285 ~~Al~l~P~~------~~a~~~Lg~~~~~~g~ 310 (498)
+++++++|++ ..+++++|.++..+|+
T Consensus 62 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 93 (111)
T 2l6j_A 62 QQGLRYTSTAEHVAIRSKLQYRLELAQGAVGS 93 (111)
T ss_dssp HHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 9999999999999985
No 192
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.08 E-value=8.8e-09 Score=117.31 Aligned_cols=170 Identities=15% Similarity=0.113 Sum_probs=134.8
Q ss_pred hhhcHHHHHHHHHHhhhcc-----hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhh
Q 010864 112 LAEQNNAAMELINSVTGVD-----EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDA 186 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~-----~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~ 186 (498)
..+.+++|.+++.++-... +..+...|++++|+.+|.++ ++++.|.++|.++.+.|+
T Consensus 1088 ~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGk------------- 1149 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGN------------- 1149 (1630)
T ss_pred HHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCC-------------
Confidence 3455666666665543322 44566789999999999886 899999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCC---------------------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH----
Q 010864 187 LLEEACKKYDEATRLCPT---------------------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQ---- 235 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~---------------------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~---- 235 (498)
|++|+++|..|.+..++ +...+.++|..+.. .|+|++|...|.+
T Consensus 1150 -yEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~----eg~YeeA~~~Y~kA~ny 1224 (1630)
T 1xi4_A 1150 -WEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYD----EKMYDAAKLLYNNVSNF 1224 (1630)
T ss_pred -HHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHh----cCCHHHHHHHHHhhhHH
Confidence 99999999887765433 23456778888888 9999999988744
Q ss_pred ---------------HHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchH--------------------HhhhhhHHHH
Q 010864 236 ---------------ATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA--------------------REKQTIVRTA 280 (498)
Q Consensus 236 ---------------Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a--------------------~~~~~~~~~A 280 (498)
|+..+++| ++..+|.+.+.++...|+|..| ++..|.+++|
T Consensus 1225 ~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEA 1299 (1630)
T 1xi4_A 1225 GRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEEL 1299 (1630)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHH
Confidence 55566655 5778888888888777777665 5678999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 281 ISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 281 i~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
+.+|++++.+++.+...+..||.+|.+-.
T Consensus 1300 I~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1300 ITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 99999999999999999999999998765
No 193
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.1e-09 Score=112.12 Aligned_cols=164 Identities=5% Similarity=-0.038 Sum_probs=137.0
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY-----------------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYD 196 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~-----------------~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 196 (498)
+...|+|++|++.|.+++..+|... .++.++|.+|..+|+ +++|++.|.
T Consensus 14 l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~--------------~~~a~~~~~ 79 (434)
T 4b4t_Q 14 LVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGA--------------KDKLREFIP 79 (434)
T ss_dssp HHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCC--------------HHHHHHHHH
Confidence 3557999999999999999988653 468999999999999 999999999
Q ss_pred HHHHhCCCCH------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchH
Q 010864 197 EATRLCPTLH------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA 270 (498)
Q Consensus 197 ~Al~l~p~~~------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a 270 (498)
+++.+.+... .+..++|.++.. .|++++|++.+++++....+ ....+....++.+||.+|...|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~--- 151 (434)
T 4b4t_Q 80 HSTEYMMQFAKSKTVKVLKTLIEKFEQV----PDSLDDQIFVCEKSIEFAKR-EKRVFLKHSLSIKLATLHYQKKQY--- 151 (434)
T ss_dssp HTHHHHHTSCHHHHHHHHHHHHHHHCSC----CSCHHHHHHHHHHHHHHHHH-SSCCSSHHHHHHHHHHHHHHHTCH---
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHccCh---
Confidence 9999866532 356778888888 99999999877777766553 233455678999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHh------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcC
Q 010864 271 REKQTIVRTAISKFRAAIQL------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 344 (498)
Q Consensus 271 ~~~~~~~~~Ai~~~~~Al~l------~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~ 344 (498)
++|+..+++++.. .+....++.++|.+|..+|+ +.+|..+|.+++.+.
T Consensus 152 -------~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 152 -------KDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRN-------------------LAKSKASLTAARTAA 205 (434)
T ss_dssp -------HHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCc-------------------HHHHHHHHHHHHHHh
Confidence 9999999999986 34446899999999999999 889999999888764
Q ss_pred C
Q 010864 345 P 345 (498)
Q Consensus 345 p 345 (498)
+
T Consensus 206 ~ 206 (434)
T 4b4t_Q 206 N 206 (434)
T ss_dssp H
T ss_pred h
Confidence 3
No 194
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.07 E-value=6.9e-10 Score=90.30 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=74.8
Q ss_pred hCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 153 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 153 ~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
.+|+++.+++++|.+|..+|+ +++|+..|+++++++|++..+|+++|.+|.. +|++++|+
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~-- 61 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDN--------------ASRALALFEELVETDPDYVGTYYHLGKLYER----LDRTDDAI-- 61 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCccCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHH--
Confidence 479999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhcCc
Q 010864 233 WKQATKNYEKAVQLNW--NSPQALNNWGLALQELSAI 267 (498)
Q Consensus 233 ~~~Al~~~~~Al~l~P--~~~~a~~~lg~~l~~~g~~ 267 (498)
..|++++++.| .+......+..++...+..
T Consensus 62 -----~~~~~al~l~~~~~~~~~~~~l~~~l~~~~~~ 93 (100)
T 3ma5_A 62 -----DTYAQGIEVAREEGTQKDLSELQDAKLKAEGL 93 (100)
T ss_dssp -----HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHhhhhcCCchhHHHHHHHHHHHcccc
Confidence 46666666654 3556666666666666554
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.04 E-value=5.5e-10 Score=89.91 Aligned_cols=92 Identities=23% Similarity=0.292 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010864 161 LYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD-AFYNWAIAISDRAKMRGRTKEAEELWKQATKN 239 (498)
Q Consensus 161 ~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~-a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~ 239 (498)
.+++|.++...|+ +++|+..|+++++++|++.. +++++|.++.. +|++++|+ ..
T Consensus 3 ~~~~a~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~----~~~~~~A~-------~~ 57 (99)
T 2kc7_A 3 QLKTIKELINQGD--------------IENALQALEEFLQTEPVGKDEAYYLMGNAYRK----LGDWQKAL-------NN 57 (99)
T ss_dssp THHHHHHHHHHTC--------------HHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH----HTCHHHHH-------HH
T ss_pred HHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH----cCCHHHHH-------HH
Confidence 3678999999999 99999999999999999999 99999999999 99999999 69
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH
Q 010864 240 YEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 295 (498)
Q Consensus 240 ~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~ 295 (498)
|+++++++|++..++++ +.+ .+++..|++++..+|++.
T Consensus 58 ~~~al~~~p~~~~~~~~--------~~~----------~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 58 YQSAIELNPDSPALQAR--------KMV----------MDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHCTTSTHHHHH--------HHH----------HHHHHHHCCTTHHHHCCS
T ss_pred HHHHHhcCCCcHHHHHH--------HHH----------HHHHHHHHHHhccCcccc
Confidence 99999999999998865 445 889999999998888753
No 196
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.03 E-value=1.5e-09 Score=88.35 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=76.7
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHH
Q 010864 201 LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 280 (498)
Q Consensus 201 l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~A 280 (498)
.+|+++.+++++|.+|.. +|++++|+ ..|+++++++|+++.+|+++|.+|..+|++ ++|
T Consensus 2 ~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK----HDNASRAL-------ALFEELVETDPDYVGTYYHLGKLYERLDRT----------DDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHH
T ss_pred CCccCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCH----------HHH
Confidence 479999999999999999 99999999 699999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHcch
Q 010864 281 ISKFRAAIQLQFD--FHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 281 i~~~~~Al~l~P~--~~~a~~~Lg~~~~~~g~ 310 (498)
+..|++++++.|+ +......+..++...+.
T Consensus 61 ~~~~~~al~l~~~~~~~~~~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 61 IDTYAQGIEVAREEGTQKDLSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhcCCchhHHHHHHHHHHHccc
Confidence 9999999999764 45666666666665553
No 197
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=6.2e-09 Score=90.17 Aligned_cols=126 Identities=18% Similarity=0.147 Sum_probs=103.2
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 216 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~ 216 (498)
.+++++|+..|+++.+... +.+. +|.+|...+. +++|+.+|++|.+. +++.++++||.+|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~--~~a~--lg~~y~~g~~--------------~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 67 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE--MFGC--LSLVSNSQIN--------------KQKLFQYLSKACEL--NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC--TTHH--HHHHTCTTSC--------------HHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCC--Hhhh--HHHHHHcCCC--------------HHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 5789999999999999874 4444 9999988887 99999999999987 7899999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCcchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 217 SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 217 ~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
..-....+++++|+ .+|+++.+. .++.++++||.+|.. .+++ ++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~-------~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~----------~~A~~~~~~Aa~~-- 126 (138)
T 1klx_A 68 ENGKYVKKDLRKAA-------QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNE----------KQAVKTFEKACRL-- 126 (138)
T ss_dssp HHCSSSCCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH----------HHHHHHHHHHHHT--
T ss_pred HcCCCCCccHHHHH-------HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCH----------HHHHHHHHHHHHC--
Confidence 75111135777777 688888776 789999999999998 7777 9999999999987
Q ss_pred CCHHHHHHHHH
Q 010864 293 DFHRAIYNLGT 303 (498)
Q Consensus 293 ~~~~a~~~Lg~ 303 (498)
.++.+.++|+.
T Consensus 127 g~~~A~~~l~~ 137 (138)
T 1klx_A 127 GSEDACGILNN 137 (138)
T ss_dssp TCHHHHHHC--
T ss_pred CCHHHHHHHhh
Confidence 56777777764
No 198
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.00 E-value=6.7e-09 Score=103.92 Aligned_cols=152 Identities=15% Similarity=0.048 Sum_probs=114.2
Q ss_pred HHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHH
Q 010864 117 NAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYD 196 (498)
Q Consensus 117 ~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~ 196 (498)
..|++++-++...... .....+.+|+.+|++|++++|+++.+|..++.+|....... +........+.+|+.. .
T Consensus 194 ~~Aydl~Lra~~~l~~--~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~---~~~~~~~~~l~~a~~a-~ 267 (372)
T 3ly7_A 194 GALLTNFYQAHDYLLH--GDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQH---PLDEKQLAALNTEIDN-I 267 (372)
T ss_dssp GGGHHHHHHHHHHHHH--CSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccC---CCchhhHHHHHHHHHH-H
Confidence 3566666555443111 12466799999999999999999999999999997543210 0111111122333331 1
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhh
Q 010864 197 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTI 276 (498)
Q Consensus 197 ~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~ 276 (498)
.++.++|.++.+|..++.++.. .|++++|+ ..+++|+.++| +..+|..+|.++...|++
T Consensus 268 ~a~~~~~~~a~~~~alal~~l~----~gd~d~A~-------~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~--------- 326 (372)
T 3ly7_A 268 VTLPELNNLSIIYQIKAVSALV----KGKTDESY-------QAINTGIDLEM-SWLNYVLLGKVYEMKGMN--------- 326 (372)
T ss_dssp HTCGGGTTCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHCC-CHHHHHHHHHHHHHTTCH---------
T ss_pred HhcccCCcCHHHHHHHHHHHHh----CCCHHHHH-------HHHHHHHhcCC-CHHHHHHHHHHHHHCCCH---------
Confidence 3446689999999999999988 99999999 69999999997 478889999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHH
Q 010864 277 VRTAISKFRAAIQLQFDFHR 296 (498)
Q Consensus 277 ~~~Ai~~~~~Al~l~P~~~~ 296 (498)
++|++.|++|++++|....
T Consensus 327 -~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 327 -REAADAYLTAFNLRPGANT 345 (372)
T ss_dssp -HHHHHHHHHHHHHSCSHHH
T ss_pred -HHHHHHHHHHHhcCCCcCh
Confidence 9999999999999998653
No 199
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.96 E-value=6.9e-09 Score=106.10 Aligned_cols=162 Identities=9% Similarity=-0.053 Sum_probs=128.1
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-----
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDY------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC----- 202 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~------~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~----- 202 (498)
+..+|++++|+.+|.+++.+.+... .+...+|.++...|+ +++|+..|++++.+.
T Consensus 65 y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 65 YVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDS--------------LDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSC--------------HHHHHHHHHHHHHHHHHSSC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCC--------------HHHHHHHHHHHHHHHHHhCc
Confidence 6779999999999999998776543 345678888888888 999999999999873
Q ss_pred -CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 203 -PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 203 -p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
+..+.++.+||.+|.. .|++.+|+..+++++..+.+. .-.+....++.++|.+|..+|++ ++|.
T Consensus 131 ~~~~~~~~~~la~~~~~----~g~~~~A~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~A~ 195 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQ----KKQYKDSLALINDLLREFKKL-DDKPSLVDVHLLESKVYHKLRNL----------AKSK 195 (434)
T ss_dssp CSSHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTS-SCSTHHHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred cHHHHHHHHHHHHHHHH----ccChHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHhCcH----------HHHH
Confidence 3347899999999999 999999997666655443321 12345678999999999999999 9999
Q ss_pred HHHHHHHHhcCCC-------HHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhc
Q 010864 282 SKFRAAIQLQFDF-------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 343 (498)
Q Consensus 282 ~~~~~Al~l~P~~-------~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 343 (498)
.+|++++.+.+.. ...+.++|.++...++ |..|..+|.+++..
T Consensus 196 ~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------------------y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 196 ASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKD-------------------YKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHh-------------------HHHHHHHHHHHHHH
Confidence 9999999885432 3456667777777776 88888888888764
No 200
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.95 E-value=1.4e-09 Score=87.39 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHH
Q 010864 209 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ-ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 209 ~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~-a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
.+++|.++.. .|++++|+ ..|+++++.+|++.. +++++|.+|..+|++ ++|+.+|+++
T Consensus 3 ~~~~a~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~a 61 (99)
T 2kc7_A 3 QLKTIKELIN----QGDIENAL-------QALEEFLQTEPVGKDEAYYLMGNAYRKLGDW----------QKALNNYQSA 61 (99)
T ss_dssp THHHHHHHHH----HTCHHHHH-------HHHHHHHHHCSSTHHHHHHHHHHHHHHHTCH----------HHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHHcCCH----------HHHHHHHHHH
Confidence 3678888988 99999999 699999999999999 999999999999999 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 288 IQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 288 l~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
++++|++..++++ +. +.++..+|+++...+|++
T Consensus 62 l~~~p~~~~~~~~--------~~-------------------~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 62 IELNPDSPALQAR--------KM-------------------VMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHCTTSTHHHHH--------HH-------------------HHHHHHHHCCTTHHHHCC
T ss_pred HhcCCCcHHHHHH--------HH-------------------HHHHHHHHHHHhccCccc
Confidence 9999999998854 22 566667777766666654
No 201
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.93 E-value=2.3e-08 Score=86.45 Aligned_cols=115 Identities=18% Similarity=0.149 Sum_probs=98.5
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 184 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
-.+++++|+..|+++.+.....+ . ||.+|.. .+.+++|+ .+|+++.+. +++.++++||.+|..
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~~a--~--lg~~y~~----g~~~~~A~-------~~~~~Aa~~--g~~~a~~~Lg~~y~~ 69 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEMFG--C--LSLVSNS----QINKQKLF-------QYLSKACEL--NSGNGCRFLGDFYEN 69 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTH--H--HHHHTCT----TSCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHcCCCHhh--h--HHHHHHc----CCCHHHHH-------HHHHHHHcC--CCHHHHHHHHHHHHc
Confidence 34579999999999999874444 3 9999988 88888877 688888776 789999999999998
Q ss_pred ----hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCChhHHHHHHHH
Q 010864 264 ----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAI 335 (498)
Q Consensus 264 ----~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~A~~ 335 (498)
.+++ ++|+.+|++|.+. .++.++++||.+|.. .++ +.+|..
T Consensus 70 G~g~~~d~----------~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d-------------------~~~A~~ 118 (138)
T 1klx_A 70 GKYVKKDL----------RKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKN-------------------EKQAVK 118 (138)
T ss_dssp CSSSCCCH----------HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHH
T ss_pred CCCCCccH----------HHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcC-------------------HHHHHH
Confidence 6777 9999999999987 789999999999988 555 899999
Q ss_pred HHHHHHhcCCC
Q 010864 336 YIAAAHALKPS 346 (498)
Q Consensus 336 ~~~~Al~l~p~ 346 (498)
+|++|.+....
T Consensus 119 ~~~~Aa~~g~~ 129 (138)
T 1klx_A 119 TFEKACRLGSE 129 (138)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHCCCH
Confidence 99999998544
No 202
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.92 E-value=2.9e-08 Score=95.62 Aligned_cols=177 Identities=12% Similarity=0.020 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC-cCCC------CCCCCchhhhHHHHHHHHHHHHHh-------------
Q 010864 142 FAAKRYANAIERNPEDYDALYNWALVLQESAD-NVSL------DSTSPSKDALLEEACKKYDEATRL------------- 201 (498)
Q Consensus 142 ~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~-~~~~------~~~~~~~~~~~~~A~~~~~~Al~l------------- 201 (498)
..+..++-.+..+|++...+...|..|..-+. ++.. ......+...+.+|.+.|.++...
T Consensus 50 ~~Lk~~e~Ll~~~P~~~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~ 129 (301)
T 3u64_A 50 LVLKVYEALHLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFT 129 (301)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 35677888888899998776666666644432 1110 000011122344555555554432
Q ss_pred ------------------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHH
Q 010864 202 ------------------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLAL 261 (498)
Q Consensus 202 ------------------~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~--~~~a~~~lg~~l 261 (498)
+|+++++++..|.++...+...+.--.|+....+|...+++|+++||+ +..+|..||.+|
T Consensus 130 ~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY 209 (301)
T 3u64_A 130 REVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFY 209 (301)
T ss_dssp HHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHH
Confidence 566688888888888763222112224667777888999999999999 677999999999
Q ss_pred HHh-----cCcchHHhhhhhHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHc-chhHHhccCCCCCCCCChhHHHHHHH
Q 010864 262 QEL-----SAIVPAREKQTIVRTAISKFRAAIQLQFDF-HRAIYNLGTVLYGL-AEDTLRTGGTVNPREVSPNELYSQSA 334 (498)
Q Consensus 262 ~~~-----g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~-~~a~~~Lg~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~A~ 334 (498)
... |+. ++|..+|++|++++|+. ..+++.+|..+... |+ +..+.
T Consensus 210 ~~vPp~~gGd~----------ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd-------------------~~~a~ 260 (301)
T 3u64_A 210 AAAPESFGGGM----------EKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN-------------------RAGFD 260 (301)
T ss_dssp HHSCTTTTCCH----------HHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC-------------------HHHHH
T ss_pred HhCCCccCCCH----------HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC-------------------HHHHH
Confidence 995 888 99999999999999975 99999999999885 87 88999
Q ss_pred HHHHHHHhcCCCH
Q 010864 335 IYIAAAHALKPSY 347 (498)
Q Consensus 335 ~~~~~Al~l~p~~ 347 (498)
.++++++..+|..
T Consensus 261 ~~L~kAL~a~p~~ 273 (301)
T 3u64_A 261 EALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHCCGGG
T ss_pred HHHHHHHcCCCCC
Confidence 9999999998874
No 203
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.86 E-value=4.2e-08 Score=96.39 Aligned_cols=159 Identities=7% Similarity=-0.041 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHH
Q 010864 143 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCP--TLHDAFYNWAIAISDRA 220 (498)
Q Consensus 143 A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p--~~~~a~~~lg~~~~~~~ 220 (498)
|+..|++.++..+....++..+|.++...|+ +++|++.+.+.+..+| ++.+++..++.++..
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~--------------~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-- 148 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGD--------------LDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-- 148 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC--------------HHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH--
Confidence 7888998888777778888999999999999 9999999999999997 889999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhcCCC----CHHHHHHHH--HHHHHhc--CcchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 221 KMRGRTKEAEELWKQATKNYEKAVQLNWN----SPQALNNWG--LALQELS--AIVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 221 ~~~g~~~eA~~~~~~Al~~~~~Al~l~P~----~~~a~~~lg--~~l~~~g--~~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
+|+.+.|. +.+++..+.+|+ +-.++.+|+ ++....| ++ ++|...|+++.+..|
T Consensus 149 --~~r~d~A~-------k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~----------q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 149 --NNNVSTAS-------TIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETA----------TSNFYYYEELSQTFP 209 (310)
T ss_dssp --TTCHHHHH-------HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTT----------THHHHHHHHHHTTSC
T ss_pred --CCCHHHHH-------HHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccH----------HHHHHHHHHHHHhCC
Confidence 99999999 688888888884 344455554 4466667 88 999999999988888
Q ss_pred C--CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHH
Q 010864 293 D--FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL----------KPSYSVYSSALRLVR 358 (498)
Q Consensus 293 ~--~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----------~p~~~~~~~~l~~~~ 358 (498)
+ ....++| ++..+|+ +.+|...+++++++ +|+++....++-.+.
T Consensus 210 ~~~~~~lLln---~~~~~g~-------------------~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~ 265 (310)
T 3mv2_B 210 TWKTQLGLLN---LHLQQRN-------------------IAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLA 265 (310)
T ss_dssp SHHHHHHHHH---HHHHHTC-------------------HHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHH
T ss_pred CcccHHHHHH---HHHHcCC-------------------HHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHH
Confidence 7 3445555 8999999 99999999988887 588887665544343
No 204
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.84 E-value=3.4e-08 Score=95.17 Aligned_cols=155 Identities=12% Similarity=0.036 Sum_probs=118.8
Q ss_pred cHHHHHHHHHHhhhcchhhHHhh-ccHHHHHH-----HHHHHH-HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhh
Q 010864 115 QNNAAMELINSVTGVDEEGRSRQ-RILTFAAK-----RYANAI-ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDAL 187 (498)
Q Consensus 115 ~~~~A~~~~~~~~~~~~~~~~~~-g~~~~A~~-----~~~~al-~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~ 187 (498)
....|..++.+.......++... ..+.+++. -+.+++ ..+|+++++++..|.+....-. .........+.
T Consensus 102 ~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~---~~~gg~~Al~~ 178 (301)
T 3u64_A 102 AYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFA---LTPLGSALPDT 178 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHT---TSCTTSCCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHh---cCCCChHHHHh
Confidence 34566666666665543333221 33333332 233333 4578999999999999876432 22334567778
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHhcCCCC-HHHHHHHHH
Q 010864 188 LEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAKMR-----GRTKEAEELWKQATKNYEKAVQLNWNS-PQALNNWGL 259 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~--~~~a~~~lg~~~~~~~~~~-----g~~~eA~~~~~~Al~~~~~Al~l~P~~-~~a~~~lg~ 259 (498)
..+|...+++|++++|+ +..+|..||.+|.. . |+.++|. .+|++|++++|+. ..+++.+|.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~----vPp~~gGd~ekA~-------~~ferAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA----APESFGGGMEKAH-------TAFEHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH----SCTTTTCCHHHHH-------HHHHHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh----CCCccCCCHHHHH-------HHHHHHHHhCCCCCchHHHHHHH
Confidence 99999999999999999 66799999999987 7 9999999 7999999999975 999999999
Q ss_pred HHHHh-cCcchHHhhhhhHHHHHHHHHHHHHhcCC
Q 010864 260 ALQEL-SAIVPAREKQTIVRTAISKFRAAIQLQFD 293 (498)
Q Consensus 260 ~l~~~-g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~ 293 (498)
.|... |++ ++|..++++|++.+|.
T Consensus 248 ~l~~~~gd~----------~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 248 ALCIPLNNR----------AGFDEALDRALAIDPE 272 (301)
T ss_dssp HTTTTTTCH----------HHHHHHHHHHHHCCGG
T ss_pred HHHHhcCCH----------HHHHHHHHHHHcCCCC
Confidence 99884 999 9999999999999877
No 205
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.82 E-value=1.2e-08 Score=105.70 Aligned_cols=108 Identities=11% Similarity=-0.047 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHH
Q 010864 188 LEEACKKYDEATRL-----CPTL---HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ-LNWNSPQALNNWG 258 (498)
Q Consensus 188 ~~~A~~~~~~Al~l-----~p~~---~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~-l~P~~~~a~~~lg 258 (498)
|++|+..|++++++ .|++ ...+.|||.+|.. +|+|++|+.++++++..|++.+. .+|+-+..++|||
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~----~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN----LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 99999999999986 3444 5689999999999 99999999999999999999884 4467778899999
Q ss_pred HHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh-----cCCCH---HHHHHHHHHHHHcc
Q 010864 259 LALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFH---RAIYNLGTVLYGLA 309 (498)
Q Consensus 259 ~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-----~P~~~---~a~~~Lg~~~~~~g 309 (498)
.+|..+|++ ++|+.+|++|+++ -|+++ .++.+|+.+...+.
T Consensus 379 ~~~~~~g~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 379 KLQLHQGMF----------PQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCH----------HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 999999999 9999999999987 45554 55677777765543
No 206
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.78 E-value=1.9e-08 Score=104.16 Aligned_cols=114 Identities=10% Similarity=-0.144 Sum_probs=97.6
Q ss_pred HHhhccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh----
Q 010864 134 RSRQRILTFAAKRYANAIERN-----PED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---- 201 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~-----P~~---~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---- 201 (498)
+..+|+|++|+..|++++++. |++ ...+.++|.+|..+|+ |++|+..|+++|.+
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~--------------~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGL--------------LEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhcc--------------HHHHHHHHHHHHHhHHHH
Confidence 456899999999999999763 444 5679999999999999 99999999999987
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhc
Q 010864 202 ----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELS 265 (498)
Q Consensus 202 ----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~-P~~~~a~~~lg~~l~~~g 265 (498)
+|+.+..++|||.+|.. +|++++|+.+|++|++.+++.+..+ |....++++|+.+..+++
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~----~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLH----QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 45556789999999999 9999999999999999999987544 556677888998887664
No 207
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.77 E-value=1e-08 Score=106.11 Aligned_cols=97 Identities=12% Similarity=0.016 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHH
Q 010864 188 LEEACKKYDEATRL-----CPT---LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWG 258 (498)
Q Consensus 188 ~~~A~~~~~~Al~l-----~p~---~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l-~P~~~~a~~~lg 258 (498)
|++|+..|+++|++ .|+ .+..++|||.+|.. +|+|++|+.++++++..+++.+.- +|+-+..++|||
T Consensus 314 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 314 PSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY----MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 99999999999997 444 45689999999999 999999999999999999998854 477788899999
Q ss_pred HHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh-----cCCCHHHH
Q 010864 259 LALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFHRAI 298 (498)
Q Consensus 259 ~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-----~P~~~~a~ 298 (498)
.+|..+|++ ++|+.+|++|+++ .|+++.+.
T Consensus 390 ~~~~~qg~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 390 RLYMGLENK----------AAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHhccCH----------HHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 999999999 9999999999987 46666543
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.77 E-value=1.1e-08 Score=105.01 Aligned_cols=192 Identities=13% Similarity=0.043 Sum_probs=64.9
Q ss_pred hhcHHHHHHHHHHhhhcc-----hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhh
Q 010864 113 AEQNNAAMELINSVTGVD-----EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDAL 187 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~-----~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~ 187 (498)
.+++.+|++.|.+..... .......|++++|+.+++.+++..++ +.+...++.+|.++|+
T Consensus 45 ~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~Klg~-------------- 109 (449)
T 1b89_A 45 KGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNR-------------- 109 (449)
T ss_dssp -----------------------------------------------------------------C--------------
T ss_pred cCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHHHHhCC--------------
Confidence 345555555554432211 11233456677777766666654322 5556666666666666
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
+.++.+.|+ .|+ ..+|.++|..+.+ .|++++|.. +|.++ ..|..+|.++.++|++
T Consensus 110 l~e~e~f~~-----~pn-~~a~~~IGd~~~~----~g~yeeA~~-------~Y~~a--------~n~~~LA~~L~~Lg~y 164 (449)
T 1b89_A 110 LAELEEFIN-----GPN-NAHIQQVGDRCYD----EKMYDAAKL-------LYNNV--------SNFGRLASTLVHLGEY 164 (449)
T ss_dssp HHHHTTTTT-----CC---------------------CTTTHHH-------HHHHT--------TCHHHHHHHHHTTTCH
T ss_pred HHHHHHHHc-----CCc-HHHHHHHHHHHHH----cCCHHHHHH-------HHHHh--------hhHHHHHHHHHHhccH
Confidence 555555443 132 2356666666666 666666653 33322 3455555555555555
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChh------------HHHHHHHH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPN------------ELYSQSAI 335 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~------------~~~~~A~~ 335 (498)
++|++.|++| +++.+|..++.++...|+-..+....+. ....+. +.+.+++.
T Consensus 165 ----------q~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~~lv~~Yek~G~~eEai~ 228 (449)
T 1b89_A 165 ----------QAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELEELINYYQDRGYFEELIT 228 (449)
T ss_dssp ----------HHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ----------HHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHHHHHHHHHHCCCHHHHHH
Confidence 6666666666 3566666666666666543222111110 101111 12789999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHcc
Q 010864 336 YIAAAHALKPSYSVYSSALRLVRSM 360 (498)
Q Consensus 336 ~~~~Al~l~p~~~~~~~~l~~~~~~ 360 (498)
++++++.+++.+......+.++..-
T Consensus 229 lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 229 MLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 9999999999987665555555433
No 209
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.76 E-value=9.6e-09 Score=105.39 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=96.3
Q ss_pred hhhcHHHHHHHHHHhhhcc---------hhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCC
Q 010864 112 LAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSP 182 (498)
Q Consensus 112 ~~~~~~~A~~~~~~~~~~~---------~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~ 182 (498)
..+++++|+.++....... ..++.+.|+++++..+++. |+ ..+|.++|..+...|.
T Consensus 73 ~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~-----pn-~~a~~~IGd~~~~~g~--------- 137 (449)
T 1b89_A 73 TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFING-----PN-NAHIQQVGDRCYDEKM--------- 137 (449)
T ss_dssp ------------------------------------CHHHHTTTTTC-----C-----------------C---------
T ss_pred hCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcC-----Cc-HHHHHHHHHHHHHcCC---------
Confidence 3567777777666555331 2256778999998888753 43 4599999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010864 183 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 262 (498)
Q Consensus 183 ~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~ 262 (498)
|++|+.+|.++ ..|.+||.++.. +|++++|+ ..|+++ +++.+|..++.++.
T Consensus 138 -----yeeA~~~Y~~a--------~n~~~LA~~L~~----Lg~yq~AV-------ea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 138 -----YDAAKLLYNNV--------SNFGRLASTLVH----LGEYQAAV-------DGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp -----TTTHHHHHHHT--------TCHHHHHHHHHT----TTCHHHHH-------HHHHHH-----TCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHh--------hhHHHHHHHHHH----hccHHHHH-------HHHHHc-----CCchhHHHHHHHHH
Confidence 99999999977 578899999999 99999999 567766 47888999889999
Q ss_pred HhcCcchH--------------------HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010864 263 ELSAIVPA--------------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 309 (498)
Q Consensus 263 ~~g~~~~a--------------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g 309 (498)
..|+++.| +++.|++++|+.++++++.+++.+..++..||.+|.+-.
T Consensus 189 ~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 189 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 88877766 567889999999999999999999999999999998776
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.72 E-value=2.2e-08 Score=103.57 Aligned_cols=97 Identities=13% Similarity=0.027 Sum_probs=83.6
Q ss_pred hhccHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh------
Q 010864 136 RQRILTFAAKRYANAIER-----NPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------ 201 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------ 201 (498)
..|+|++|+..|+++|++ .|++ ...+.++|.+|..+|+ |++|+..|+++|++
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------~~eA~~~~~~aL~i~~~~lG 375 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQD--------------WEGALKYGQKIIKPYSKHYP 375 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHSC
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcC--------------HHHHHHHHHHHHHHHHHHcC
Confidence 368999999999999986 3555 5678999999999999 99999999999987
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH
Q 010864 202 --CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ 252 (498)
Q Consensus 202 --~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~ 252 (498)
+|+-+..++|||.+|.. +|++++|+.+|++|++.+++.+. |+++.
T Consensus 376 ~~Hp~~a~~l~nLa~~~~~----qg~~~eA~~~~~~Al~i~~~~lG--~~Hp~ 422 (433)
T 3qww_A 376 VYSLNVASMWLKLGRLYMG----LENKAAGEKALKKAIAIMEVAHG--KDHPY 422 (433)
T ss_dssp SSCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTC--TTCHH
T ss_pred CCChHHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHcC--CCChH
Confidence 55556789999999999 99999999999999999998764 44443
No 211
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.63 E-value=1.1e-06 Score=95.94 Aligned_cols=170 Identities=10% Similarity=-0.028 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010864 140 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEAC-KKYDEATRLCPTLHDAFYNWAIAISD 218 (498)
Q Consensus 140 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~-~~~~~Al~l~p~~~~a~~~lg~~~~~ 218 (498)
.+.....|+++|...|.+++.|+..+..+...|+ .++|. ..|++|+..+|.+...|..++.....
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~--------------~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~ 390 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNT--------------DSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL 390 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSC--------------CTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCc--------------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999998 88997 99999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHh----cCCC-----------CHHHHHHHHHHHHHhcCcchH-------------
Q 010864 219 RAKMRGRTKEAEELWKQATKNYEKAVQ----LNWN-----------SPQALNNWGLALQELSAIVPA------------- 270 (498)
Q Consensus 219 ~~~~~g~~~eA~~~~~~Al~~~~~Al~----l~P~-----------~~~a~~~lg~~l~~~g~~~~a------------- 270 (498)
.|+++.|.+.|++++..+.+.++ -.|. ...+|..++.+..+.|..+.|
T Consensus 391 ----~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~ 466 (679)
T 4e6h_A 391 ----NTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKL 466 (679)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGG
T ss_pred ----hCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Confidence 99999999888888776543332 1243 355788888877777777544
Q ss_pred -----------Hh-h-hhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHH
Q 010864 271 -----------RE-K-QTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYI 337 (498)
Q Consensus 271 -----------~~-~-~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 337 (498)
.+ . .++.+.|...|+++++..|+++..|...+......|+ ...|...|
T Consensus 467 ~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-------------------~~~AR~lf 527 (679)
T 4e6h_A 467 VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-------------------ESQVKSLF 527 (679)
T ss_dssp SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-------------------HHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-------------------HHHHHHHH
Confidence 00 1 2346788888888888888888877777777777776 67888888
Q ss_pred HHHHhcCCC
Q 010864 338 AAAHALKPS 346 (498)
Q Consensus 338 ~~Al~l~p~ 346 (498)
++++...|+
T Consensus 528 eral~~~~~ 536 (679)
T 4e6h_A 528 ESSIDKISD 536 (679)
T ss_dssp HHHTTTSSS
T ss_pred HHHHHhcCC
Confidence 998888874
No 212
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.61 E-value=3.3e-07 Score=80.07 Aligned_cols=105 Identities=13% Similarity=0.020 Sum_probs=92.0
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-C-CCHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-P-TLHDAFYNWAI 214 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-p-~~~~a~~~lg~ 214 (498)
...+..+.+.|.+.+..++.+.++.+++|+++..... ..++++++..++..++.+ | ++.+++|+||.
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~-----------~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv 79 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKY-----------NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 79 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSS-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCCccchHHHHHHHHH
Confidence 4566778899999999999999999999999999773 223889999999999999 7 57899999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 215 AISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 215 ~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
.+.+ +|+|++|. .+++++|+++|+|.++...+-.+-.+
T Consensus 80 ~~~k----l~~Y~~A~-------~y~~~lL~ieP~n~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 80 GNYR----LKEYEKAL-------KYVRGLLQTEPQNNQAKELERLIDKA 117 (152)
T ss_dssp HHHH----TSCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHH----ccCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9999 99999999 79999999999999998877665443
No 213
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.60 E-value=4.1e-07 Score=79.45 Aligned_cols=107 Identities=9% Similarity=0.007 Sum_probs=92.5
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHhcC-C-CCHHHHHHH
Q 010864 183 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG---RTKEAEELWKQATKNYEKAVQLN-W-NSPQALNNW 257 (498)
Q Consensus 183 ~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g---~~~eA~~~~~~Al~~~~~Al~l~-P-~~~~a~~~l 257 (498)
...+.+..+.+.|.+.+..++.+..+.+++|.++.+ .. ++++++ ..++..++.+ | ++.+++++|
T Consensus 9 l~~~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~----S~~~~~~~~gI-------~lLe~ll~~~~p~~~rd~lY~L 77 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR----SKYNDDIRKGI-------VLLEELLPKGSKEEQRDYVFYL 77 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT----CSSHHHHHHHH-------HHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc----CCCHHHHHHHH-------HHHHHHHhcCCccchHHHHHHH
Confidence 345668899999999999999999999999999998 87 444666 7899999888 7 679999999
Q ss_pred HHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 258 GLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 258 g~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
|..+.++|+| ++|+.+++++|+++|++..+..-+-.+-....+
T Consensus 78 Av~~~kl~~Y----------~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 78 AVGNYRLKEY----------EKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHTSCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999988877666555443
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.59 E-value=4.9e-07 Score=72.61 Aligned_cols=73 Identities=11% Similarity=-0.055 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHHHHHhcC---cchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010864 247 NWNSPQALNNWGLALQELSA---IVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 323 (498)
Q Consensus 247 ~P~~~~a~~~lg~~l~~~g~---~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~ 323 (498)
+|+++..+..+|.++...++ . ++|...|++|++++|+++.+++.+|.+++..|+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~----------~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~------------- 58 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMT----------DEVSLLLEQALQLEPYNEAALSLIANDHFISFR------------- 58 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCC----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCC----------HHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCC-------------
Confidence 68999999999999987665 6 999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhcCCCHH
Q 010864 324 VSPNELYSQSAIYIAAAHALKPSYS 348 (498)
Q Consensus 324 ~~~~~~~~~A~~~~~~Al~l~p~~~ 348 (498)
|.+|+.+|+++++.+|..+
T Consensus 59 ------y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 59 ------FQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp ------HHHHHHHHHHHHTCCCTTC
T ss_pred ------HHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999843
No 215
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.52 E-value=4.4e-07 Score=72.89 Aligned_cols=72 Identities=15% Similarity=-0.026 Sum_probs=66.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHH
Q 010864 202 CPTLHDAFYNWAIAISDRAKMRGR---TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 278 (498)
Q Consensus 202 ~p~~~~a~~~lg~~~~~~~~~~g~---~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~ 278 (498)
+|+++..+..+|.++.. .++ ..+|. ..++++++++|+++.+++.+|.++.+.|+| +
T Consensus 2 ~p~~~~~~~~~a~al~~----~~~~~~~~~A~-------~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y----------~ 60 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY----LHKQAMTDEVS-------LLLEQALQLEPYNEAALSLIANDHFISFRF----------Q 60 (93)
T ss_dssp CCCCHHHHHHHHHHHHH----TTTTCCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------H
T ss_pred CCCCHHHHHHHHHHHHH----hcCCCCCHHHH-------HHHHHHHHHCcCCHHHHHHHHHHHHHcCCH----------H
Confidence 68999999999999976 655 68888 799999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHhcCCC
Q 010864 279 TAISKFRAAIQLQFDF 294 (498)
Q Consensus 279 ~Ai~~~~~Al~l~P~~ 294 (498)
+|+.+|+++++.+|.+
T Consensus 61 ~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 61 EAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHhhCCCC
Confidence 9999999999999884
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=6.8e-07 Score=73.13 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHH
Q 010864 205 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 284 (498)
Q Consensus 205 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~ 284 (498)
++.-.+.+|..+.. .|+|..|+.-|++|+..+..--...+....++.+||.++.++|++ +.|+.++
T Consensus 4 sa~dc~~lG~~~~~----~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~----------~~A~~~~ 69 (104)
T 2v5f_A 4 TAEDCFELGKVAYT----EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDL----------DKALLLT 69 (104)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred CHHHHHHHHHHHHH----ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCH----------HHHHHHH
Confidence 35667899999999 999999996555555444211111345789999999999999999 9999999
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q 010864 285 RAAIQLQFDFHRAIYNLGTV 304 (498)
Q Consensus 285 ~~Al~l~P~~~~a~~~Lg~~ 304 (498)
+++++++|++..+..|++..
T Consensus 70 ~~al~l~P~~~~~~~n~~~~ 89 (104)
T 2v5f_A 70 KKLLELDPEHQRANGNLKYF 89 (104)
T ss_dssp HHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHhhHHHH
Confidence 99999999999999999843
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.47 E-value=1.8e-06 Score=70.52 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHcCCHHHH
Q 010864 157 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-------PTLHDAFYNWAIAISDRAKMRGRTKEA 229 (498)
Q Consensus 157 ~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-------p~~~~a~~~lg~~~~~~~~~~g~~~eA 229 (498)
++.-.+.+|..++..++ |..|+..|++|++.. +....++.+||.++.+ +|++++|
T Consensus 4 sa~dc~~lG~~~~~~~~--------------y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~----~g~~~~A 65 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEAD--------------YYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ----QGDLDKA 65 (104)
T ss_dssp CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH----TTCHHHH
T ss_pred CHHHHHHHHHHHHHccc--------------hHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH----ccCHHHH
Confidence 45678899999999999 999999999999973 3467899999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010864 230 EELWKQATKNYEKAVQLNWNSPQALNNWGLA 260 (498)
Q Consensus 230 ~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~ 260 (498)
+ ..++++++++|++..+++|++.+
T Consensus 66 ~-------~~~~~al~l~P~~~~~~~n~~~~ 89 (104)
T 2v5f_A 66 L-------LLTKKLLELDPEHQRANGNLKYF 89 (104)
T ss_dssp H-------HHHHHHHHHCTTCHHHHHHHHHH
T ss_pred H-------HHHHHHHhcCCCCHHHHhhHHHH
Confidence 9 69999999999999999999843
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.38 E-value=9.9e-06 Score=88.32 Aligned_cols=168 Identities=10% Similarity=0.006 Sum_probs=131.5
Q ss_pred HhhccHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-----------C
Q 010864 135 SRQRILTFAA-KRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----------C 202 (498)
Q Consensus 135 ~~~g~~~~A~-~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----------~ 202 (498)
...|+.++|+ ..|++|+..+|.+...|..++......|+ +++|...|++++.. .
T Consensus 354 ~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~--------------~e~aR~iyek~l~~l~~~~~~~~~~~ 419 (679)
T 4e6h_A 354 GEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTK--------------IPEIETTILSCIDRIHLDLAALMEDD 419 (679)
T ss_dssp HHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence 3467778897 99999999999999999999999999999 99999999999975 2
Q ss_pred CC-----------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-----------------------------HHHHHHHH
Q 010864 203 PT-----------LHDAFYNWAIAISDRAKMRGRTKEAEELWK-----------------------------QATKNYEK 242 (498)
Q Consensus 203 p~-----------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~-----------------------------~Al~~~~~ 242 (498)
|. ...+|...+..... .|..+.|...|. +|.+.|++
T Consensus 420 p~~~~~~~~~~~~~~~vWi~y~~~erR----~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~ 495 (679)
T 4e6h_A 420 PTNESAINQLKSKLTYVYCVYMNTMKR----IQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLEL 495 (679)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHH
T ss_pred CcchhhhhhhccchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 53 33466666666555 666666665443 34456667
Q ss_pred HHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHcchhHHhccCCC
Q 010864 243 AVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD---FHRAIYNLGTVLYGLAEDTLRTGGTV 319 (498)
Q Consensus 243 Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~---~~~a~~~Lg~~~~~~g~~~~~~~~~~ 319 (498)
+++..|+++..|..++......|+. +.|...|++|+...|+ ...+|......-...|.
T Consensus 496 ~Lk~~p~~~~~w~~y~~fe~~~~~~----------~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~--------- 556 (679)
T 4e6h_A 496 GLKYFATDGEYINKYLDFLIYVNEE----------SQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGS--------- 556 (679)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCC---------
T ss_pred HHHHCCCchHHHHHHHHHHHhCCCH----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCC---------
Confidence 7777777777777777777777777 9999999999999883 45677777777777787
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCCCHHH
Q 010864 320 NPREVSPNELYSQSAIYIAAAHALKPSYSV 349 (498)
Q Consensus 320 ~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~ 349 (498)
...+...+.++.+..|++..
T Consensus 557 ----------~~~~~~v~~R~~~~~P~~~~ 576 (679)
T 4e6h_A 557 ----------LNSVRTLEKRFFEKFPEVNK 576 (679)
T ss_dssp ----------SHHHHHHHHHHHHHSTTCCH
T ss_pred ----------HHHHHHHHHHHHHhCCCCcH
Confidence 67788899999999999763
No 219
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.92 E-value=0.00056 Score=71.75 Aligned_cols=145 Identities=10% Similarity=-0.010 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---
Q 010864 140 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI--- 216 (498)
Q Consensus 140 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~--- 216 (498)
.+.....|++++...|..+..|+..+..+...|+ .++|...|++|+.. |.+...|+..+...
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~--------------~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~ 259 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQ--------------KEKAKKVVERGIEM-SDGMFLSLYYGLVMDEE 259 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhC-CCcHHHHHHHHhhcchh
Confidence 3456789999999999999999999999999999 99999999999999 99876666554431
Q ss_pred ---HHHHHHc--CC--------HHHH-------------HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc-Ccch
Q 010864 217 ---SDRAKMR--GR--------TKEA-------------EELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS-AIVP 269 (498)
Q Consensus 217 ---~~~~~~~--g~--------~~eA-------------~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g-~~~~ 269 (498)
...+... .. .... ....+.|...|.+| ...+.....|...+.+-...+ +.
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~-- 336 (493)
T 2uy1_A 260 AVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSR-- 336 (493)
T ss_dssp HHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCS--
T ss_pred HHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCCh--
Confidence 0000000 00 0000 01123455788888 433345667777777766666 47
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 270 AREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 270 a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+.|...|+++++..|+.+..+...+......|+
T Consensus 337 --------~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~ 369 (493)
T 2uy1_A 337 --------ATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGD 369 (493)
T ss_dssp --------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred --------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC
Confidence 999999999999999998888777777777775
No 220
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.83 E-value=0.00023 Score=59.82 Aligned_cols=105 Identities=12% Similarity=0.017 Sum_probs=89.4
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC-C-CCHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-P-TLHDAFYNWAI 214 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-p-~~~~a~~~lg~ 214 (498)
...+..+...|.+.+..++...++-+++|+++..... ..+..++|..++..++-+ | ..-+++|.||.
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~-----------~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAv 82 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRY-----------NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 82 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSS-----------HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 4566778888999999899999999999999988776 233566999999999887 5 56789999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 215 AISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 215 ~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
.+.+ +|+|.+|. .+++..|+.+|+|.++......+--+
T Consensus 83 g~yk----lg~Y~~A~-------~~~~~lL~~eP~n~QA~~Lk~~i~~~ 120 (126)
T 1nzn_A 83 GNYR----LKEYEKAL-------KYVRGLLQTEPQNNQAKELERLIDKA 120 (126)
T ss_dssp HHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHH----hhhHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999 99999999 79999999999999998877666443
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.76 E-value=0.00028 Score=59.26 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHh
Q 010864 187 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-W-NSPQALNNWGLALQEL 264 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~-P-~~~~a~~~lg~~l~~~ 264 (498)
.+..+...|.+.+..++....+.+++|.++.+ ......-. +++..++..+..+ | ..-..++.||..++++
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~----S~~~~d~~----~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR----TRYNDDIR----KGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTT----SSSHHHHH----HHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHc----CCCHHHHH----HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHh
Confidence 47788889999999889999999999999998 77766622 3447888888777 5 5778999999999999
Q ss_pred cCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010864 265 SAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 305 (498)
Q Consensus 265 g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~ 305 (498)
|+| ++|..+++..|++.|++..+..-...+-
T Consensus 88 g~Y----------~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 88 KEY----------EKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp TCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999 9999999999999999988776555543
No 222
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.73 E-value=0.0073 Score=63.33 Aligned_cols=185 Identities=10% Similarity=-0.037 Sum_probs=138.7
Q ss_pred HHHHhhhcchhhHHhhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH
Q 010864 122 LINSVTGVDEEGRSRQRILTFAAKRYANAIERN-PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR 200 (498)
Q Consensus 122 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 200 (498)
.++..+.. +.+.|++++|+..|++..+.. .-+...|+.+=.++...+. .......+.+++|.+.|++...
T Consensus 28 ~l~~~id~----c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~-----~~~~~~~~~l~~A~~lf~~M~~ 98 (501)
T 4g26_A 28 LLKQKLDM----CSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEA-----ATESSPNPGLSRGFDIFKQMIV 98 (501)
T ss_dssp HHHHHHHH----TTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCC-----CSSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCc-----hhhhhhcchHHHHHHHHHHHHH
Confidence 34455544 678999999999999998764 2245667666555544433 1122345668999999999887
Q ss_pred hCCC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHhcCcchHHhhhhhH
Q 010864 201 LCPT-LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL--NWNSPQALNNWGLALQELSAIVPAREKQTIV 277 (498)
Q Consensus 201 l~p~-~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l--~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~ 277 (498)
..-. +..+|+.+-.+|.+ .|++++|.+ .|++..+. .| +..+|+.+-..|.+.|+.
T Consensus 99 ~G~~Pd~~tyn~lI~~~~~----~g~~~~A~~-------l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~---------- 156 (501)
T 4g26_A 99 DKVVPNEATFTNGARLAVA----KDDPEMAFD-------MVKQMKAFGIQP-RLRSYGPALFGFCRKGDA---------- 156 (501)
T ss_dssp TTCCCCHHHHHHHHHHHHH----HTCHHHHHH-------HHHHHHHTTCCC-CHHHHHHHHHHHHHTTCH----------
T ss_pred hCCCCCHHHHHHHHHHHHh----cCCHHHHHH-------HHHHHHHcCCCC-ccceehHHHHHHHHCCCH----------
Confidence 6432 67889999999999 999999994 66665544 34 678899999999999999
Q ss_pred HHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh--cCCCHHHHHHH
Q 010864 278 RTAISKFRAAIQL--QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA--LKPSYSVYSSA 353 (498)
Q Consensus 278 ~~Ai~~~~~Al~l--~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~--l~p~~~~~~~~ 353 (498)
++|...|++..+. .|+ ...|..|-.+|.+.|+ .++|...+++.-+ ..|+...|...
T Consensus 157 ~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~~g~-------------------~d~A~~ll~~Mr~~g~~ps~~T~~~l 216 (501)
T 4g26_A 157 DKAYEVDAHMVESEVVPE-EPELAALLKVSMDTKN-------------------ADKVYKTLQRLRDLVRQVSKSTFDMI 216 (501)
T ss_dssp HHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHTSSBCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhhCCC-------------------HHHHHHHHHHHHHhCCCcCHHHHHHH
Confidence 9999999999875 455 7789999999999998 7888888877554 56777766555
Q ss_pred HHHH
Q 010864 354 LRLV 357 (498)
Q Consensus 354 l~~~ 357 (498)
....
T Consensus 217 ~~~F 220 (501)
T 4g26_A 217 EEWF 220 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.40 E-value=0.00059 Score=59.93 Aligned_cols=117 Identities=7% Similarity=-0.062 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHHHHHcCCHHHHH
Q 010864 160 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---------HDAFYNWAIAISDRAKMRGRTKEAE 230 (498)
Q Consensus 160 a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~---------~~a~~~lg~~~~~~~~~~g~~~eA~ 230 (498)
+++.-...++..+. |+.|+-....++.+..++ +.++..+|.+++. .++|..|.
T Consensus 22 ~l~dqik~L~d~~L--------------Y~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~----~~eyrrA~ 83 (167)
T 3ffl_A 22 NVIDHVRDMAAAGL--------------HSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH----DKEYRNAV 83 (167)
T ss_dssp CHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH----TTCHHHHH
T ss_pred HHHHHHHHHHHhhh--------------HHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc----ccHHHHHH
Confidence 44555566677777 999999999988874322 3478999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhcC------------------CCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcC
Q 010864 231 ELWKQATKNYEKAVQLN------------------WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 292 (498)
Q Consensus 231 ~~~~~Al~~~~~Al~l~------------------P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P 292 (498)
..|++|+...+...+.. +...+..+.++.||.+++++ ++|+..++.. -..-
T Consensus 84 ~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~----------~~Ai~~Le~I-p~k~ 152 (167)
T 3ffl_A 84 SKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQD----------KDAIAILDGI-PSRQ 152 (167)
T ss_dssp HHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCH----------HHHHHHHHTS-CGGG
T ss_pred HHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCH----------HHHHHHHhcC-Cchh
Confidence 99999987776433221 22347899999999999999 9999987653 2234
Q ss_pred CCHHHHHHHHHHH
Q 010864 293 DFHRAIYNLGTVL 305 (498)
Q Consensus 293 ~~~~a~~~Lg~~~ 305 (498)
..+.+...||.+|
T Consensus 153 Rt~kvnm~LakLy 165 (167)
T 3ffl_A 153 RTPKINMLLANLY 165 (167)
T ss_dssp CCHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHh
Confidence 5677888888765
No 224
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.34 E-value=0.00018 Score=59.24 Aligned_cols=105 Identities=15% Similarity=0.227 Sum_probs=72.8
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-... ....|+++||+|....|..+..... ......|+|..+..++.+.+..
T Consensus 9 ~~~G~L~K~~~-----~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~~~- 66 (115)
T 2dn6_A 9 LKQGYMMKKGH-----RRKNWTERWFVLKPNIISYYVSEDL----------------KDKKGDILLDENCCVESLPDKD- 66 (115)
T ss_dssp SEEEEEEEECT-----TSSCEEEEEEEECSSCEEEESSTTC----------------SSEEEEECCCTTCEEEEECCCT-
T ss_pred eEEEEEEecCC-----CCCCcEEeEEEEECCEEEEeCCCCC----------------cccCcEEEecCcEEEEECCCCC-
Confidence 34666654211 2357999999998876665442211 1235578888777776654422
Q ss_pred CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHHhhcccchh
Q 010864 446 PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIYARGKADVL 492 (498)
Q Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 492 (498)
...+.|.|.|.....||.|+|.++++.|++||+.+......|..-..
T Consensus 67 ~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~~~~~~ 113 (115)
T 2dn6_A 67 GKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSSGPS 113 (115)
T ss_dssp TCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred CCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 34578888876666699999999999999999999998887765443
No 225
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.26 E-value=7.8e-05 Score=66.62 Aligned_cols=105 Identities=12% Similarity=0.186 Sum_probs=65.9
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccc---cC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSAC---AD 442 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 442 (498)
+..|||.-............|+++||+|+...|..+-...... ........|+|..+..++.+ .+
T Consensus 4 ikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~------------~~~~~~G~I~L~~~~~ve~~~~~~~ 71 (169)
T 1btk_A 4 ILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERG------------RRGSKKGSIDVEKITCVETVVPEKN 71 (169)
T ss_dssp CEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTT------------EEEEEEEEEEGGGEEEEEECCCCSS
T ss_pred EEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccC------------CCCceeeEEECcceEEEEeccCCCC
Confidence 3567776432211111235799999999988777655421000 00123456788877766654 22
Q ss_pred CC--CC-----------CC--------CeeeEeecCCceeeeecChhhhhhHHHHHHHHHH
Q 010864 443 LT--LP-----------PG--------AGLCIETIHGPVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 443 ~~--~p-----------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
.+ .+ +| +.|.|-|.....||.|+|.+++++|++||+-+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 72 PPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred cchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 11 11 11 7888887777789999999999999999997653
No 226
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.25 E-value=0.00015 Score=64.47 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=68.0
Q ss_pred hhhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC-
Q 010864 365 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL- 443 (498)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 443 (498)
-+.+|+|.-.....-......|+++||+|....|..+...... ......|+|..+..++.+.+.
T Consensus 15 ~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~---------------~~~~G~I~L~~~~~v~~~~~~~ 79 (164)
T 2lul_A 15 TILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK---------------KYRKGFIDVSKIKCVEIVKNDD 79 (164)
T ss_dssp EEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS---------------CCCCCEEEGGGCCEEEECCCCS
T ss_pred eeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc---------------cccccEEEEeeeEEEEeccccc
Confidence 3456777643222222223469999999988777665321110 112346888888887766553
Q ss_pred ---CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 444 ---TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 444 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.....+.|.|.|.....||.|+|.++++.|++||+-|-
T Consensus 80 ~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i 120 (164)
T 2lul_A 80 GVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEI 120 (164)
T ss_dssp SSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 23366788888766667999999999999999998763
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.21 E-value=0.0047 Score=52.71 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=75.6
Q ss_pred CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcchhHHhccCCCCCCCCC
Q 010864 247 NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVS 325 (498)
Q Consensus 247 ~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~-~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~ 325 (498)
+.-+.++.+++++++.+..+. .+..++|..++..++..|. .-+.+|.|+..++++|+
T Consensus 35 ~~vs~~t~F~YAw~Lv~S~~~-------~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~--------------- 92 (144)
T 1y8m_A 35 PTATIQSRFNYAWGLIKSTDV-------NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE--------------- 92 (144)
T ss_dssp TTSCHHHHHHHHHHHHHSSSH-------HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTC---------------
T ss_pred CCCcHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhh---------------
Confidence 356899999999999988765 5568999999999999885 56789999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHc
Q 010864 326 PNELYSQSAIYIAAAHALKPSYSVYSSALRLVRS 359 (498)
Q Consensus 326 ~~~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~~ 359 (498)
|..|..|....|+..|+|........++.+
T Consensus 93 ----Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 93 ----YSMAKRYVDTLFEHERNNKQVGALKSMVED 122 (144)
T ss_dssp ----HHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999999999999999999977776666554
No 228
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.13 E-value=0.035 Score=57.94 Aligned_cols=149 Identities=14% Similarity=-0.021 Sum_probs=100.2
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH------HhcCcCC-CC--------CC-----------CCchhhhH
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQ------ESADNVS-LD--------ST-----------SPSKDALL 188 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~------~~g~~~~-~~--------~~-----------~~~~~~~~ 188 (498)
.+.|+.+.|...|++++.. |.+...|...+.... ..-.... .. .. .....+.+
T Consensus 224 ~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~ 302 (493)
T 2uy1_A 224 IGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGL 302 (493)
T ss_dssp HHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCH
Confidence 4578999999999999999 998777765554310 0000000 00 00 00123448
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 189 EEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG-RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 189 ~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g-~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
+.|...|.+| ...+.....|...+.+-.. .+ +.+.|. ..|+++++..|+.+..|..++......|+.
T Consensus 303 ~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~----~~~d~~~ar-------~ife~al~~~~~~~~~~~~yid~e~~~~~~ 370 (493)
T 2uy1_A 303 ELFRKLFIEL-GNEGVGPHVFIYCAFIEYY----ATGSRATPY-------NIFSSGLLKHPDSTLLKEEFFLFLLRIGDE 370 (493)
T ss_dssp HHHHHHHHHH-TTSCCCHHHHHHHHHHHHH----HHCCSHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHh-hCCCCChHHHHHHHHHHHH----HCCChHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHcCCH
Confidence 8899999999 4333355666665655554 44 577777 688888888899998888888888888888
Q ss_pred chHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 268 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
+.|...|+++ +.....|......-...|+
T Consensus 371 ----------~~aR~l~er~----~k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 371 ----------ENARALFKRL----EKTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp ----------HHHHHHHHHS----CCBHHHHHHHHHHHHHHSC
T ss_pred ----------HHHHHHHHHH----HHHHHHHHHHHHHHHHCCC
Confidence 9999999998 3456666666655555565
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.10 E-value=0.006 Score=51.40 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=80.6
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Q 010864 139 ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-LHDAFYNWAIAIS 217 (498)
Q Consensus 139 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~-~~~a~~~lg~~~~ 217 (498)
++.....-|.+-+ ...-.+.+-+++|+++..... ..+..++|..++..++.+|. .-+++|.||..+.
T Consensus 22 eL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~-----------~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y 89 (134)
T 3o48_A 22 QLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTD-----------VNDERLGVKILTDIYKEAESRRRECLYYLTIGCY 89 (134)
T ss_dssp HHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSC-----------HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 3344444454433 222357889999999988766 34577999999999999995 5789999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 010864 218 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQEL 264 (498)
Q Consensus 218 ~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~ 264 (498)
+ +|+|.+|. .+.+..|+.+|+|.++......+--+.
T Consensus 90 k----lgdY~~Ar-------~y~d~lL~~eP~N~QA~~Lk~~Ie~ki 125 (134)
T 3o48_A 90 K----LGEYSMAK-------RYVDTLFEHERNNKQVGALKSMVEDKI 125 (134)
T ss_dssp H----HTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred H----hhhHHHHH-------HHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 9 99999999 799999999999999988777665443
No 230
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.09 E-value=0.0018 Score=56.87 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=76.9
Q ss_pred HhhccHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC---
Q 010864 135 SRQRILTFAAKRYANAIERNPED---------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC--- 202 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~---------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~--- 202 (498)
...|.|+.|+.....++.+..++ ..++..+|.+++..++ |.+|...|++||.+.
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~e--------------yrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKE--------------YRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHCC
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccH--------------HHHHHHHHHHHHHHHHHH
Confidence 55788999999999877765333 3488999999999999 999999999998862
Q ss_pred ---CC-------------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010864 203 ---PT-------------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 260 (498)
Q Consensus 203 ---p~-------------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~ 260 (498)
+. ..+..|.++.||.+ ++++.+|+. .++ .+-..-..+.....||.+
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~----l~~~~~Ai~-------~Le-~Ip~k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTV----LKQDKDAIA-------ILD-GIPSRQRTPKINMLLANL 164 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHH----TTCHHHHHH-------HHH-TSCGGGCCHHHHHHHHHH
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHH----HCCHHHHHH-------HHh-cCCchhcCHHHHHHHHHH
Confidence 11 12688999999999 999999993 332 222223467777777776
Q ss_pred HH
Q 010864 261 LQ 262 (498)
Q Consensus 261 l~ 262 (498)
|.
T Consensus 165 y~ 166 (167)
T 3ffl_A 165 YK 166 (167)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 231
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.09 E-value=0.0056 Score=51.59 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcchhHHhccCCCCCCCCChh
Q 010864 249 NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 327 (498)
Q Consensus 249 ~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~-~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~ 327 (498)
-.+++.+++++++.+.... .+..++|..++..++.+|. .-+.+|.|+..++++|+
T Consensus 38 vs~qt~F~yAw~Lv~S~~~-------~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgd----------------- 93 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDV-------NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE----------------- 93 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCH-------HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTC-----------------
T ss_pred CChhhHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhh-----------------
Confidence 3789999999999988764 5568999999999999984 47889999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHc
Q 010864 328 ELYSQSAIYIAAAHALKPSYSVYSSALRLVRS 359 (498)
Q Consensus 328 ~~~~~A~~~~~~Al~l~p~~~~~~~~l~~~~~ 359 (498)
|..|..|....+++.|+|........++.+
T Consensus 94 --Y~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 94 --YSMAKRYVDTLFEHERNNKQVGALKSMVED 123 (134)
T ss_dssp --HHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 999999999999999999987776666543
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.05 E-value=0.01 Score=50.57 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Q 010864 140 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-LHDAFYNWAIAISD 218 (498)
Q Consensus 140 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~-~~~a~~~lg~~~~~ 218 (498)
+.....-|.+-+. +.-..++.+++|+++..... ..+..+++..++..++-+|. .-+++|.||..+.+
T Consensus 22 L~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~-----------~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk 89 (144)
T 1y8m_A 22 LEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTD-----------VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK 89 (144)
T ss_dssp HHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSS-----------HHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH
Confidence 3334444444311 34578999999999998876 34578999999999999995 56799999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 219 RAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 219 ~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
+|+|.+|. .+.+..|+.+|+|.++......+-.+
T Consensus 90 ----l~~Y~~Ar-------~y~d~lL~~eP~n~QA~~Lk~~Ie~~ 123 (144)
T 1y8m_A 90 ----LGEYSMAK-------RYVDTLFEHERNNKQVGALKSMVEDK 123 (144)
T ss_dssp ----TTCHHHHH-------HHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred ----hhhHHHHH-------HHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 99999999 79999999999999988776665443
No 233
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.98 E-value=0.00032 Score=59.35 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=62.2
Q ss_pred hhccccCCCCCCCCCCchhhhhhhhccch--hh-hhhhcccchhhccccccCCCCCCCCCCccccccCCccccccccc-C
Q 010864 367 KAGYLTAPPAGIPVAPHSDWKRSQFVLNH--EG-LQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-D 442 (498)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 442 (498)
..|||.--.. .....|+++||+|+. .. +.....+.... ........|+|..+..|..+. .
T Consensus 17 ~~G~L~K~g~----~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~------------~~~~~~G~I~L~~~~~V~~~~~~ 80 (126)
T 1v5p_A 17 ICGFLDIEDN----ENSGKFLRRYFILDTQANCLLWYMDNPQNLA------------VGAGAVGSLQLTYISKVSIATPK 80 (126)
T ss_dssp EECCEEEECT----TCSSCEEEEEEEEETTTTEEEEESSCTTTSC------------TTCCCSEEEETTTCCEEEECCTT
T ss_pred eEEEEEEeCC----CCCCCccceEEEEecCCCCEEEEECCCCCCC------------CCceeeEEEECCCccEEecCCcc
Confidence 3688765321 124689999999983 22 23322211000 001234567777766666554 2
Q ss_pred CCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010864 443 LTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 443 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
...-..++|.|.|..-..||.|+|.++++.|++||+-+..|
T Consensus 81 ~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 81 QKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp TSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred cCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 22235578888766555699999999999999999976543
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.97 E-value=0.014 Score=50.30 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=96.1
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHhcCcchHH
Q 010864 200 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--------SPQALNNWGLALQELSAIVPAR 271 (498)
Q Consensus 200 ~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~--------~~~a~~~lg~~l~~~g~~~~a~ 271 (498)
-+.|++++.|......+.+ .|+...- .+.++-+..|++|+..-|- +...|.+++.. ...++.
T Consensus 7 ~~~p~~yd~W~~yl~llE~----~g~p~~d-~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~---- 76 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEK----NSVPLSD-ALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEP---- 76 (161)
T ss_dssp ---CCSHHHHHHHHHHHHH----HTCSCCH-HHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCG----
T ss_pred eeCCCCHHHHHHHHHHHHH----cCCCchh-hHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCH----
Confidence 3689999999999999988 8888222 4445555788888866553 56677777755 566777
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCHH-HH
Q 010864 272 EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS-VY 350 (498)
Q Consensus 272 ~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~-~~ 350 (498)
++|...|+.++.+...++.+|...+..-..+|+ ...|...+.+|+.+.|... ..
T Consensus 77 ------d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgn-------------------l~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 77 ------DDARDYFQMARANCKKFAFVHISFAQFELSQGN-------------------VKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp ------GGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHTTCBCHHHH
T ss_pred ------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHccc-------------------HHHHHHHHHHHhccCCCcHHHH
Confidence 999999999999999999999999999889998 8999999999999999766 45
Q ss_pred HHHHHHHH
Q 010864 351 SSALRLVR 358 (498)
Q Consensus 351 ~~~l~~~~ 358 (498)
..++.-+.
T Consensus 132 e~a~~nl~ 139 (161)
T 4h7y_A 132 EIALRNLN 139 (161)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 55555444
No 235
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.88 E-value=0.015 Score=50.13 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=93.6
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHHc
Q 010864 152 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT--------LHDAFYNWAIAISDRAKMR 223 (498)
Q Consensus 152 ~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~--------~~~a~~~lg~~~~~~~~~~ 223 (498)
-+.|++++.|......+...|+ ...+..+++-++.|++|+..-|- +...|.+.+.. .. .
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~--------p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~e----i 73 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSV--------PLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KA----I 73 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTC--------SCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HH----H
T ss_pred eeCCCCHHHHHHHHHHHHHcCC--------CchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HH----h
Confidence 4689999999999999988887 11125568999999999998664 23444555533 34 6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010864 224 GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGT 303 (498)
Q Consensus 224 g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~ 303 (498)
++.++|. ..|+.++.+....+..|...+..-.++|+. ..|...+.+|+.+.|.....+ ..+.
T Consensus 74 ~D~d~aR-------~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl----------~kARkILg~AiG~~~k~~~~l-e~a~ 135 (161)
T 4h7y_A 74 QEPDDAR-------DYFQMARANCKKFAFVHISFAQFELSQGNV----------KKSKQLLQKAVERGAVPLEML-EIAL 135 (161)
T ss_dssp HCGGGCH-------HHHHHHHHHCTTBHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHTTCBCHHHH-HHHH
T ss_pred cCHHHHH-------HHHHHHHHHhHHHHHHHHHHHHHHHHcccH----------HHHHHHHHHHhccCCCcHHHH-HHHH
Confidence 7777777 566666666778899999999999999998 999999999999999865443 3344
Q ss_pred HHHHcch
Q 010864 304 VLYGLAE 310 (498)
Q Consensus 304 ~~~~~g~ 310 (498)
.-.+.|+
T Consensus 136 ~nl~~~~ 142 (161)
T 4h7y_A 136 RNLNLQK 142 (161)
T ss_dssp HHHHTTC
T ss_pred HhhhcCC
Confidence 4445554
No 236
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.85 E-value=0.00069 Score=55.89 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=63.2
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccc--hhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLN--HEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
...|||.-.. .....|+++||+|. ...|..+..... ......|+|..+..+.++...
T Consensus 9 ~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~~ 67 (117)
T 1v5u_A 9 SYEGILYKKG-----AFMKPWKARWFVLDKTKHQLRYYDHRMD----------------TECKGVIDLAEVEAVAPGTPT 67 (117)
T ss_dssp SEEEEEEECC-----CSSSCCEEEEEEEETTTTEEEEESSSSC----------------SSCCCEEEGGGEEEEECCCCC
T ss_pred cEEEEEEecC-----CCCCCceeeEEEEECCCCEEEEeecCCC----------------CccceEEEccCcEEEeecCcc
Confidence 3467776432 12458999999998 545555432211 123456888888777765532
Q ss_pred -CC----CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHH
Q 010864 444 -TL----PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 444 -~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 480 (498)
.. ...++|.|.|.....||.|+|.++++.|++||+-+
T Consensus 68 ~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~ 109 (117)
T 1v5u_A 68 IGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSC 109 (117)
T ss_dssp TTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTT
T ss_pred ccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHH
Confidence 22 24578999876556689999999999999999753
No 237
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.82 E-value=0.001 Score=57.90 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=64.9
Q ss_pred hhhhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 364 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
|....|||.--. .....|+++||+|....|..+-..... .....|+|.....+.. .+.
T Consensus 17 pv~keG~L~Kkg-----~~~k~WkrRWFvLk~~~L~Yyk~~~d~----------------~~~g~I~L~~~~~~~~-~~~ 74 (149)
T 1x1f_A 17 PLYFEGFLLIKR-----SGYREYEHYWTELRGTTLFFYTDKKSI----------------IYVDKLDIVDLTCLTE-QNS 74 (149)
T ss_dssp CEEEEEEEEEEC-----TTCCSCEEEEEEEETTEEEEESCSSCS----------------SCSEECCCSSCCEEEE-CCC
T ss_pred CccEEEEEEEeC-----CCCCCceeEEEEEcCCEEEEEeCCCcc----------------ccCcEEECCCceEEee-ccC
Confidence 455678887532 223689999999987766654332221 1234677776654411 111
Q ss_pred CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010864 444 TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 444 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
.-...+.|+|.|.....||.|+|.++++.|+.||+-|..+
T Consensus 75 ~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 75 TEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp TTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred CCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 1124678999887777899999999999999999977654
No 238
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.79 E-value=0.0013 Score=54.11 Aligned_cols=95 Identities=18% Similarity=0.236 Sum_probs=60.8
Q ss_pred hhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCC
Q 010864 367 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP 446 (498)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 446 (498)
..|||.-.. .....|+++||+|....|..+..... ......|+|.....++...+..-+
T Consensus 10 ~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v~~~~~~~~~~ 68 (118)
T 1v89_A 10 KMGWLKKQR-----SIVKNWQQRYFVLRAQQLYYYKDEED----------------TKPQGCMYLPGCTIKEIATNPEEA 68 (118)
T ss_dssp EEEEEEEEC-----SSSSCEEEEEEEEETTEEEEESSSSC----------------CSCSEEECSTTEEEEEECCCSSCC
T ss_pred EEEEEEecC-----CCCCCccEEEEEEECCEEEEEeCCCC----------------CCceEEEECCCCEEEEcCcCcccC
Confidence 456665431 12347999999998876665433221 123445666655444333333345
Q ss_pred CCCeeeEeec-------CC-ceeeeecChhhhhhHHHHHHHHHH
Q 010864 447 PGAGLCIETI-------HG-PVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 447 ~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
..++|.|.|. .+ ..||.|+|.++++.|++||+.+..
T Consensus 69 ~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 69 GKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 6788998872 33 358999999999999999997753
No 239
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.78 E-value=0.0018 Score=53.13 Aligned_cols=85 Identities=21% Similarity=0.251 Sum_probs=60.1
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCc-ee
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGP-VF 461 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~ 461 (498)
...|+++||+|....|..+..... ......|+|..+..+.++.+. -...++|.|.|..+. .|
T Consensus 18 ~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~~~~~~~~-~~~~~~F~i~~~~~r~~~ 80 (113)
T 1pls_A 18 FNTWKPMWVVLLEDGIEFYKKKSD----------------NSPKGMIPLKGSTLTSPCQDF-GKRMFVFKITTTKQQDHF 80 (113)
T ss_dssp SSCCEEEEEEEETTEEEEESSTTC----------------SSCSEEEESSSCCEESSCCSS-CCSSSEEEEEETTTEEEE
T ss_pred CCCceEEEEEEECCEEEEEeCCCC----------------CCcceEEEcCCCEEEEecCCC-CCCccEEEEEcCCCCEEE
Confidence 357999999998877665433211 123456777777766644432 235678999877654 58
Q ss_pred eeecChhhhhhHHHHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVYTIY 484 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~~~~ 484 (498)
|.|+|.++++.|+++|+.+..-.
T Consensus 81 l~a~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 81 FQAAFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999876543
No 240
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=96.65 E-value=0.00045 Score=57.79 Aligned_cols=97 Identities=22% Similarity=0.338 Sum_probs=66.1
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-.. .....|+++||+|....|..+..... ......|+|.++..+..|.....
T Consensus 15 ~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~~~v~~~~~~~~ 73 (125)
T 1eaz_A 15 IKAGYCVKQG-----AVMKNWKRRYFQLDENTIGYFKSELE----------------KEPLRVIPLKEVHKVQECKQSDI 73 (125)
T ss_dssp SEEEEEEEEC-----TTTCCEEEEEEEECSSEEEEESSTTC----------------SSCSEEEEGGGCCEEEECTTHHH
T ss_pred cEEEEEEEeC-----CCCCCcceEEEEEeCCEEEEEcCCCC----------------CcceeEEEcccceEEeecccccc
Confidence 4567776431 12357999999998776665433221 12345678888777766543222
Q ss_pred -CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010864 446 -PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 446 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
...++|.|.|.....||.|+|.++++.|++||+.+...
T Consensus 74 ~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 74 MMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp HTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 35678888876555689999999999999999987654
No 241
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.65 E-value=0.11 Score=54.21 Aligned_cols=129 Identities=11% Similarity=-0.001 Sum_probs=102.9
Q ss_pred hccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCC-CCHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERN-PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCP-TLHDAFYNWAI 214 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p-~~~~a~~~lg~ 214 (498)
.+.+++|...|++..... .-+..+|+.+-..|...|+ +++|...|++..+..- -+...|+.+=.
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~--------------~~~A~~l~~~M~~~g~~Pd~~tyn~lI~ 148 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDD--------------PEMAFDMVKQMKAFGIQPRLRSYGPALF 148 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHcCCCCccceehHHHH
Confidence 456899999999988754 2267889999999999999 9999999999987632 26778888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh--
Q 010864 215 AISDRAKMRGRTKEAEELWKQATKNYEKAVQL--NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-- 290 (498)
Q Consensus 215 ~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l--~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-- 290 (498)
.|.+ .|+.++|.+ .|++..+. .| +..+|+.|-.+|.+.|+. ++|...|++..+.
T Consensus 149 ~~~~----~g~~~~A~~-------l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~----------d~A~~ll~~Mr~~g~ 206 (501)
T 4g26_A 149 GFCR----KGDADKAYE-------VDAHMVESEVVP-EEPELAALLKVSMDTKNA----------DKVYKTLQRLRDLVR 206 (501)
T ss_dssp HHHH----TTCHHHHHH-------HHHHHHHTTCCC-CHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHTS
T ss_pred HHHH----CCCHHHHHH-------HHHHHHhcCCCC-CHHHHHHHHHHHhhCCCH----------HHHHHHHHHHHHhCC
Confidence 8999 999999994 66666544 34 678899999999999999 9999999998764
Q ss_pred cCCCHHHHHHHH
Q 010864 291 QFDFHRAIYNLG 302 (498)
Q Consensus 291 ~P~~~~a~~~Lg 302 (498)
.|+ ...+..+-
T Consensus 207 ~ps-~~T~~~l~ 217 (501)
T 4g26_A 207 QVS-KSTFDMIE 217 (501)
T ss_dssp SBC-HHHHHHHH
T ss_pred CcC-HHHHHHHH
Confidence 465 34444443
No 242
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.60 E-value=0.0012 Score=54.49 Aligned_cols=90 Identities=10% Similarity=0.149 Sum_probs=61.7
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.--.. .....|+++||+|....|..+..... ......|+|..+..+++..
T Consensus 9 ~~~G~L~K~~~----~~~~~WkkR~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~~~v~~~~---- 64 (115)
T 2cod_A 9 VKSGWLDKLSP----QGKRMFQKRWVKFDGLSISYYNNEKE----------------MYSKGIIPLSAISTVRVQG---- 64 (115)
T ss_dssp CEEEEEEECCS----SSSSCCEEEEEEECSSEEEEEESSCC----------------SSCCCEEETTTEEEEEEET----
T ss_pred cEEEEEEEcCC----CCCCCCceEEEEEECCEEEEEcCCCC----------------cccCCEEECCcceEEEeCC----
Confidence 45677764311 12357999999998776665433222 1234467777777666543
Q ss_pred CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 446 PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.++|.|.|.....||.|+|.++++.|+++|+.+.
T Consensus 65 --~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 65 --DNKFEVVTTQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp --TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 5788888665556899999999999999999764
No 243
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.49 E-value=0.002 Score=52.51 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=60.0
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-. ......|+++||+|....|..+..... ......|+|..+..+....+.
T Consensus 9 ~~~G~L~K~-----~~~~~~Wk~RwfvL~~~~L~yyk~~~~----------------~~~~~~i~L~~~~~~~~~~~~-- 65 (109)
T 1wgq_A 9 TMSGYLYRS-----KGSKKPWKHLWFVIKNKVLYTYAASED----------------VAALESQPLLGFTVTLVKDEN-- 65 (109)
T ss_dssp SCEEEEEEE-----SSTTSCCEEEEEEEETTEEEEESCTTC----------------SSCSEEEECSSEEEEECCCSS--
T ss_pred eEEEEEEeC-----CCCCCCceeEEEEEeCCEEEEECCCCc----------------CccCceEECCCCEEEECCCCC--
Confidence 346666632 122358999999998766655432221 123446677666555443222
Q ss_pred CCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010864 446 PPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 446 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 480 (498)
.+.++|.|.|..+. .||.|+|.++++.|++||+.+
T Consensus 66 ~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 66 SESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp CSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHH
Confidence 24578888876555 589999999999999999875
No 244
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.48 E-value=0.00084 Score=56.92 Aligned_cols=100 Identities=21% Similarity=0.323 Sum_probs=56.5
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhcc-chhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVL-NHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 444 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (498)
...|||.--. .....|+++||+| ....|..+....... ..| ...+.+++.+|.....|.++.
T Consensus 9 ~~~G~L~K~g-----~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~-------~~g-----~i~l~~~~~~i~~~~~~~~v~ 71 (130)
T 2d9v_A 9 VRGGWLWRQS-----SILRRWKRNWFALWLDGTLGYYHDETAQD-------EED-----RVVIHFNVRDIKVGQECQDVQ 71 (130)
T ss_dssp EEEEEEEEEC-----SSSCCEEEEEEEEETTTEEEEESSSSTTS-------EEE-----EEECTTTEEEEEEGGGCSSCC
T ss_pred eEEEEEEeec-----CccCCceeeEEEEccCCEEEEEeCCCCCC-------cCc-----eEecccceeEEeccccccccC
Confidence 3467766431 1235899999999 555555543322110 000 001111221222112233332
Q ss_pred C----CCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHHH
Q 010864 445 L----PPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 445 ~----p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
. ...+.|.|.|..+.+ ||.|+|.++++.|+.||+.+..
T Consensus 72 ~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 72 PPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp CCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 2 346789998766554 8999999999999999998754
No 245
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.34 E-value=0.0025 Score=52.93 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=62.8
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchh--hhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
...|||.--... .....|+++||+|... .|..+..... ......|+|..+..+...
T Consensus 9 ~~~G~L~K~g~~---~~~k~WkkRwfvL~~~~~~L~Yy~~~~~----------------~~~~g~I~L~~~~~~~~~--- 66 (119)
T 2dhk_A 9 KLCGYLSKFGGK---GPIRGWKSRWFFYDERKCQLYYSRTAQD----------------ANPLDSIDLSSAVFDCKA--- 66 (119)
T ss_dssp CCEEEEEECSCS---SSSCCCEEEEEEEETTTTEEEEESSTTC----------------CSCSEEEEGGGCEEEECT---
T ss_pred cEEEEEEecCCC---CCCCCceeEEEEEECCccEEEEECCCCC----------------cccccEEECCCCEEEecC---
Confidence 346777643210 1235899999999876 4554332211 122445777766655421
Q ss_pred CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHHhh
Q 010864 444 TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIYAR 486 (498)
Q Consensus 444 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 486 (498)
-...+.|.|.|..-..||.|+|.++++.|++||+.+.+-+..
T Consensus 67 -~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 67 -DAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHN 108 (119)
T ss_dssp -TGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 124568888876444579999999999999999988766654
No 246
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=96.33 E-value=0.0025 Score=53.34 Aligned_cols=96 Identities=14% Similarity=0.210 Sum_probs=60.0
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccccc-CCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-DLT 444 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 444 (498)
...|||.--.. .....|+++||+|....|..+..... ......|+|.++. +..+. .-.
T Consensus 22 ~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~~~ 80 (128)
T 2dkp_A 22 VRRGWLYKQDS----TGMKLWKKRWFVLSDLCLFYYRDEKE----------------EGILGSILLPSFQ-IALLTSEDH 80 (128)
T ss_dssp CEEEEEEEECC----SSSCCEEEEEEEEETTEEEEESSTTC----------------CSEEEEECGGGSE-EEECCGGGC
T ss_pred EEEEEEEEeCC----CCCCCceeEEEEEeCCEEEEECCCCC----------------cccceEEEcCceE-EEEcCCccc
Confidence 45777754311 12357999999998766665432221 1123345665432 22221 123
Q ss_pred CCCCCeeeEeecCC-ceeeeecChhhhhhHHHHHHHHHH
Q 010864 445 LPPGAGLCIETIHG-PVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 445 ~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
....++|.|.|..+ ..||.|+|.++++.|++||+.+..
T Consensus 81 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 81 INRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp CSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 35668899987653 469999999999999999987754
No 247
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.30 E-value=0.0026 Score=52.80 Aligned_cols=95 Identities=20% Similarity=0.244 Sum_probs=59.1
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC-CC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-LT 444 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 444 (498)
...|||.--.. .....|+++||+|....|..+..... ......|+|.++. +..+.. -.
T Consensus 23 ~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~~~ 81 (122)
T 2yry_A 23 TKAGWLFKQAS----SGVKQWNKRWFVLVDRCLFYYKDEKE----------------ESILGSIPLLSFR-VAAVQPSDN 81 (122)
T ss_dssp EEEEEEEEECC----SSSCCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEESTTCC-CEECCTTCS
T ss_pred cEEEEEEEECC----CCCCCcEEEEEEEeCCEEEEECCCCC----------------CCcccEEEcCCCE-EEEcCcccc
Confidence 45677764311 12357999999998766655432221 1123456666543 322211 23
Q ss_pred CCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHH
Q 010864 445 LPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 445 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
....++|.|.+..+. .||.|+|.++++.|++||+.+.
T Consensus 82 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 82 ISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp CSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 345678888655444 5899999999999999998764
No 248
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.24 E-value=0.0036 Score=51.43 Aligned_cols=95 Identities=20% Similarity=0.244 Sum_probs=58.9
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC-CC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-LT 444 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 444 (498)
...|||.--.. .....|+++||+|....|..+..... ......|+|.++. +..+.. -.
T Consensus 12 ~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~~~ 70 (117)
T 2d9y_A 12 TKAGWLFKQAS----SGVKQWNKRWFVLVDRCLFYYKDEKE----------------ESILGSIPLLSFR-VAAVQPSDN 70 (117)
T ss_dssp CEEEEEEEECT----TSSSCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEECSSCE-EEECCTTTT
T ss_pred eEEEEEEEeCC----CCCCCceEEEEEECCCEEEEECCCCC----------------CCcCCEEEeCCeE-EEEcCcccc
Confidence 34677654311 12357999999998766665432211 1123456666543 222211 23
Q ss_pred CCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHH
Q 010864 445 LPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 445 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.+..++|.|.+..+. .||.|+|.++++.|++||+.+.
T Consensus 71 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 71 ISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp CCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 456678888654444 5899999999999999998764
No 249
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=96.22 E-value=0.0032 Score=51.02 Aligned_cols=93 Identities=20% Similarity=0.246 Sum_probs=55.4
Q ss_pred hhccccCCCCCCCCCCchhhhhhhhccchh--hhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC-
Q 010864 367 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL- 443 (498)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 443 (498)
..|||.-.. .....|+++||+|... .|..+..... ......|+|....-.......
T Consensus 9 ~~G~L~K~g-----~~~~~Wk~R~fvL~~~~~~L~yyk~~~~----------------~~~~g~i~L~~~~v~~~~~~~~ 67 (109)
T 2i5f_A 9 KQGCLLKQG-----HRRKNWKVRKFILREDPAYLHYYDPAGA----------------EDPLGAIHLRGCVVTSVESNSN 67 (109)
T ss_dssp EEEEEEEEC-----TTTCCEEEEEEEEETTTTEEEEECTTSC----------------SSCSEEEECTTCEEEEECC---
T ss_pred EEEEEEEcC-----CCCCCceEEEEEEeCCCcEEEEECCCCC----------------CCccEEEECCCCEEEEccCCcc
Confidence 456665421 1234699999999865 3444322111 112345666653211111111
Q ss_pred --CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010864 444 --TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 444 --~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 480 (498)
.....++|.|.|..+. .||.|+|.++++.|++||+.+
T Consensus 68 ~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 68 GRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp -----CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred cccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 1126788999987766 588999999999999999865
No 250
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=96.16 E-value=0.0041 Score=51.61 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=59.6
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC-CC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-LT 444 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 444 (498)
...|||.--.. .....|+++||+|....|..+..... ......|+|..+. +..+.. ..
T Consensus 12 ~~~G~L~K~~~----~~~~~WkkR~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~~-v~~~~~~~~ 70 (123)
T 1upq_A 12 HIRGWLHKQDS----SGLRLWKRRWFVLSGHCLFYYKDSRE----------------ESVLGSVLLPSYN-IRPDGPGAP 70 (123)
T ss_dssp EEEEEEEEECS----SSSCCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEEGGGCE-EEECCSSCT
T ss_pred eEEEEEEeeCC----CCCCCceeEEEEEeCCEEEEECCCCC----------------cccceEEECCCCE-EEECCCCcc
Confidence 45777764321 12357999999998766665432221 1123345555432 333322 22
Q ss_pred CCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010864 445 LPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 445 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
....+.|.|.|..+. .||.|+|.++++.|++||..+..
T Consensus 71 ~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 71 RGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp TSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 336788888766544 58899999999999999998764
No 251
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=96.15 E-value=0.0033 Score=50.66 Aligned_cols=82 Identities=10% Similarity=0.137 Sum_probs=54.4
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC--CCCCCCCeeeEeecCC-ce
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD--LTLPPGAGLCIETIHG-PV 460 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~-~~ 460 (498)
..|+++||+|....|..+..... ......|+|..+.. ..+.+ ......++|.|.|..+ ..
T Consensus 21 ~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v-~~~~~~~~~~~~~~~F~i~~~~~r~~ 83 (108)
T 1u5d_A 21 SEWQKRWCVVSRGLFYYYANEKS----------------KQPKGTFLIKGYSV-RMAPHLRRDSKKESCFELTSQDRRTY 83 (108)
T ss_dssp EEEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCEE-EECGGGCSSGGGGGEEEEECSSSCCE
T ss_pred cCceeeEEEEeCCEEEEecCCCC----------------CCCCEEEEecceEE-EeCCccccccCCcceEEEEcCCCcEE
Confidence 68999999998766655432221 11234566665552 22211 1223568899987764 46
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010864 461 FLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 461 ~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
||.|+|.++++.|++||+.+..
T Consensus 84 ~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 84 EFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999997754
No 252
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.10 E-value=0.0039 Score=52.29 Aligned_cols=94 Identities=24% Similarity=0.377 Sum_probs=56.4
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccch--hhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNH--EGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
...|||.-.. .....|+++||+|.. .-|..+...... ......|+|... .+..+.+.
T Consensus 19 ~~~G~L~K~g-----~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~---------------~~~~g~i~L~~~-~v~~~~~~ 77 (129)
T 1x1g_A 19 VKQGYLAKQG-----HKRKNWKVRRFVLRKDPAFLHYYDPSKEE---------------NRPVGGFSLRGS-LVSALEDN 77 (129)
T ss_dssp EEEEEEEEEC-----SSSSSEEEEEEEEEESSCEEEEECSSSCC---------------SSCSCCEESTTC-CCEECCSS
T ss_pred EEEEEEEEEC-----CCCCCeeeEEEEEeCCCCeEEEeCCCCcC---------------CccceEEECcCC-EEEEeCCC
Confidence 4467776431 114689999999984 244443322010 112334555431 12222222
Q ss_pred CCC-------CCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010864 444 TLP-------PGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 444 ~~p-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 480 (498)
..| ..++|.|.|..+. .||.|+|.++++.|++||+.+
T Consensus 78 ~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 122 (129)
T 1x1g_A 78 GVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 122 (129)
T ss_dssp SSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 222 4678999887765 689999999999999999876
No 253
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=96.07 E-value=0.0034 Score=52.49 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=65.1
Q ss_pred hhhhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 364 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
+....|||.-.. .....|+++||+|....|..+..... ......|+|..+..+++..+
T Consensus 17 ~~~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~- 74 (126)
T 1fao_A 17 LGTKEGYLTKQG-----GLVKTWKTRWFTLHRNELKYFKDQMS----------------PEPIRILDLTECSAVQFDYS- 74 (126)
T ss_dssp TTCEEEEEEEEC-----SSSCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEEGGGCCEEEEECS-
T ss_pred CccEEEEEEEcC-----CCCCCcccEEEEEECCEEEEeCCCCC----------------CCceeEEEccceEEEEeccc-
Confidence 345678876532 12457999999998776665432221 12345677777766665432
Q ss_pred CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010864 444 TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 444 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
-...++|.|.|.....||.|+|.++++.|++||+-+..-
T Consensus 75 -~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 75 -QERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp -SSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 224578888875555699999999999999999976543
No 254
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=96.07 E-value=0.0028 Score=51.75 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=27.9
Q ss_pred CCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHH
Q 010864 448 GAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 448 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.++|.|.|..+. .||.|+|.++++.|++||+-+.
T Consensus 76 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 76 DCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp GGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 468888765455 4899999999999999998764
No 255
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.07 E-value=0.0051 Score=51.05 Aligned_cols=87 Identities=14% Similarity=0.250 Sum_probs=55.3
Q ss_pred chhhhhhhhccch--hhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCc-
Q 010864 383 HSDWKRSQFVLNH--EGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGP- 459 (498)
Q Consensus 383 ~~~w~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~- 459 (498)
...|+++||+|.. ..|..+....... ......|+|..+. +.+.. ..++.|.|.|..+.
T Consensus 21 ~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~--------------~~~~g~I~L~~~~-v~~~~----~~~~~F~i~~~~~r~ 81 (120)
T 2d9x_A 21 VTGWQYRFFVLNNEAGLLEYFVNEQSRN--------------QKPRGTLQLAGAV-ISPSD----EDSHTFTVNAASGEQ 81 (120)
T ss_dssp TTEEEEEEEEECTTTCEEEEESSGGGSS--------------SCCSEEEECTTCC-EECCS----SSSSCEEECCSSSCC
T ss_pred CCCceEEEEEEECCCCEEEEEecCcccC--------------CCccceEEcceEE-EEecC----CCCCEEEEEcCCCCE
Confidence 3579999999974 3444433222210 0123345665543 22211 24588888876654
Q ss_pred eeeeecChhhhhhHHHHHHHHHHHHhhcc
Q 010864 460 VFLVADSWEALDGWLDAIRLVYTIYARGK 488 (498)
Q Consensus 460 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 488 (498)
.||.|+|.++++.|++||+.+......+.
T Consensus 82 ~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 82 YKLRATDAKERQHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 48889999999999999998877665544
No 256
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=95.98 E-value=0.0034 Score=52.73 Aligned_cols=97 Identities=20% Similarity=0.236 Sum_probs=59.5
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchh--hhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
...|||.-... ....|+++||+|... -|..+..... ......|+|....-.......
T Consensus 19 ~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v~~~~~~~ 77 (129)
T 1x05_A 19 IKQGCLLKQGH-----RRKNWKVRKFILREDPAYLHYYDPAGA----------------EDPLGAIHLRGCVVTSVESNS 77 (129)
T ss_dssp EEEEEEEECCS-----SCCCCEEEEEEEEETTTEEEEECSSCC----------------SSCSEEEECTTCEEEECCCCC
T ss_pred eEEEEEEecCC-----CCCCCeeEEEEEeCCCCEEEEECCCCC----------------CcceeEEEccCCEEEEccCCc
Confidence 45777765311 234699999999865 2444322111 122345666653222211111
Q ss_pred ---CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHHH
Q 010864 444 ---TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 444 ---~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
..-..+.|.|.|..+. .||.|+|.++++.|++||..+...
T Consensus 78 ~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 78 NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp CSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 1126788999877665 589999999999999999987653
No 257
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=95.90 E-value=0.0025 Score=50.35 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=48.5
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCceeee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLV 463 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 463 (498)
..|+++||+|....|..+....... ......+++..+.-.. .-...+.|.+.|.....||.
T Consensus 15 k~WkkR~FvL~~~~L~Yy~~~~~~~--------------~~~~~~i~l~~~~~~~-----~~~~~~~F~i~~~~r~~~l~ 75 (94)
T 2rsg_A 15 HGWQDRWVVLKNNALSYYKSEDETE--------------YGCRGSICLSKAVITP-----HDFDECRFDISVNDSVWYLR 75 (94)
T ss_dssp TCEEEEEEEEETTEEEEESSTTGGG--------------TCCSEEEETTTCEEEE-----CSSCSSEEEEEETTEEEEEE
T ss_pred CCceEEEEEEECCEEEEEEeccccc--------------ccceeeEecceeeeec-----CcccceeEEEEeCCeEEEEE
Confidence 4699999999987776654332211 0012223333221111 11245678888655445899
Q ss_pred ecChhhhhhHHHHHHHH
Q 010864 464 ADSWEALDGWLDAIRLV 480 (498)
Q Consensus 464 ~~~~~~~~~~~~a~~~~ 480 (498)
|+|.++++.|++||..+
T Consensus 76 A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 76 AQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CCSSCCTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhh
Confidence 99999999999999865
No 258
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.84 E-value=0.0082 Score=51.84 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=60.9
Q ss_pred hhhccccCCCCCCCC-CCchhhhhhhhccchh-----hhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccc
Q 010864 366 LKAGYLTAPPAGIPV-APHSDWKRSQFVLNHE-----GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSA 439 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~-~~~~~w~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (498)
...|||.-....... .....|+++||+|... .|..+..... .......|+|..+..+..
T Consensus 19 ~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~---------------~~~~~g~I~L~~~~~~~~ 83 (150)
T 1wg7_A 19 TKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI---------------SKEPKGSIFLDSCMGVVQ 83 (150)
T ss_dssp CCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC---------------SSCCSEEECTTTCCEECC
T ss_pred eEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC---------------CCCcCcEEecccCEEEec
Confidence 456777653211100 1234799999999875 4444322110 012344566666554432
Q ss_pred ccCCCCCCCCeeeEeecCC-ceeeeecChhhhhhHHHHHHHHHH
Q 010864 440 CADLTLPPGAGLCIETIHG-PVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 440 ~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
. .-...++|.|.|..+ ..||.|+|.++++.|+.||+-+..
T Consensus 84 ~---~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 84 N---NKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp C---CSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred C---CCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 1 124668899987654 458999999999999999998754
No 259
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.78 E-value=0.0082 Score=50.82 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=55.6
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-.. ....|+++||+|...-|..+-.... ......|+|....-++ ..+-
T Consensus 9 ~k~GwL~K~g------~~k~WkrRWfVLk~~~L~yyk~~~~----------------~~p~G~I~L~~~~v~~---~~~~ 63 (130)
T 1v88_A 9 VMADWLKIRG------TLKSWTKLWCVLKPGVLLIYKTQKN----------------GQWVGTVLLNACEIIE---RPSK 63 (130)
T ss_dssp CEEEEEEECC------SSSSCEEEEEEEETTEEEEESCSSS----------------CCCCEEEECSSCEECC---CCTT
T ss_pred EEEeEEEEeC------CCCCceEEEEEEECCEEEEECCCCC----------------CCceEEEEcCCCEEEE---CCCC
Confidence 4567776521 2358999999998766655433222 1123345555332111 1222
Q ss_pred CCCCeeeEeecCC-----------------------c-eeeeecChhhhhhHHHHHHHHHH
Q 010864 446 PPGAGLCIETIHG-----------------------P-VFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 446 p~~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
..++.|.|.+... . .||.|+|.++++.|++||+.+..
T Consensus 64 ~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 64 KDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp TSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3457777754221 1 36899999999999999998763
No 260
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=95.72 E-value=0.0085 Score=50.53 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=56.1
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccc--cccccCCCCCCCCeeeEeec-CC-
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVS--VSACADLTLPPGAGLCIETI-HG- 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~-~~- 458 (498)
...|+++||+|....|..+...+... ...+...|+|..+.. +++..+-.....++|.|.|. ++
T Consensus 20 ~~~WkrRwfvL~~~~L~yyk~~~d~~-------------~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~ 86 (134)
T 2y7b_A 20 FGAWHRRWCVLSGNCISYWTYPDDEK-------------RKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQR 86 (134)
T ss_dssp EEEEEEEEEEEETTEEEEESSHHHHT-------------TSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECC
T ss_pred CCCcEEEEEEEECCEEEEECCCCccc-------------ccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCc
Confidence 45899999999887766654332211 012244567766442 44433322335577777752 11
Q ss_pred ------------------ceeeeecChhhhhhHHHHHHHHHHH
Q 010864 459 ------------------PVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 459 ------------------~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
..||.|+|.++++.|++||+-+..-
T Consensus 87 ~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 87 EDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp TTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 2699999999999999999987543
No 261
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=95.72 E-value=0.0084 Score=50.39 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=30.6
Q ss_pred CCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010864 446 PPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 446 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
...+.|.|-|..+. .||.|+|.++++.|++||+-+..
T Consensus 87 ~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 87 EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp CCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 46678888877754 59999999999999999987654
No 262
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=95.70 E-value=0.013 Score=48.73 Aligned_cols=91 Identities=9% Similarity=0.184 Sum_probs=56.0
Q ss_pred CchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-
Q 010864 382 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV- 460 (498)
Q Consensus 382 ~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~- 460 (498)
....|.++||+|....|..+......... .+. +-.....|+|... .++++.|. -.+.++|+|.|..+.+
T Consensus 28 ~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~------~~~--~~~~~~~i~L~~~-~v~~~~d~-~kr~~~F~l~t~~~~~~ 97 (122)
T 1dro_A 28 SNRSWDKVYMAAKAGRISFYKDQKGYKSN------PEL--TFRGEPSYDLQNA-AIEIASDY-TKKKHVLRVKLANGALF 97 (122)
T ss_dssp CCCCCEEEEEEESSSCCBEESSSSHHHHC------TTC--CSSCCCBCCCSSC-CCEECCSS-SSSTTEEEEECSSSCEE
T ss_pred CCCCccEEEEEEECCEEEEEeCCcccccC------CCc--ccCCCceEECCCC-EEEeCCCC-CCCCeEEEEEEcCCCEE
Confidence 35689999999988776655443332210 000 0001123444321 23333332 2467899999877766
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010864 461 FLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 461 ~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
+|.|+|.+++..|+.||.-+.+
T Consensus 98 lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 98 LLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp EEECSSSHHHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999997643
No 263
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.65 E-value=0.053 Score=56.49 Aligned_cols=81 Identities=23% Similarity=0.218 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHH
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRA 286 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~ 286 (498)
.++.+||.+... ...+..|. .+|.+|+.++|++...++.||.+....|+. -+|+.+|-+
T Consensus 153 r~l~~LGDL~RY----~~~~~~A~-------~~Y~~A~~~~P~~G~~~nqLavla~~~~~~----------l~a~y~y~r 211 (497)
T 1ya0_A 153 HCLVHLGDIARY----RNQTSQAE-------SYYRHAAQLVPSNGQPYNQLAILASSKGDH----------LTTIFYYCR 211 (497)
T ss_dssp HHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTBSHHHHHHHHHHHHTTCH----------HHHHHHHHH
T ss_pred HHHHHcccHHHH----HHHHHHHH-------HHHHHHHHhCCCCCchHHHHHHHHhccccc----------HHHHHHHHH
Confidence 355667776666 77776666 799999999999999999999999999999 999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHc
Q 010864 287 AIQLQFDFHRAIYNLGTVLYGL 308 (498)
Q Consensus 287 Al~l~P~~~~a~~~Lg~~~~~~ 308 (498)
++....-++.+..||...+...
T Consensus 212 sl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 212 SIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCChhHHHHHHHHHHHH
Confidence 9999888999999999988764
No 264
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.62 E-value=0.0097 Score=49.36 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=67.1
Q ss_pred hhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC-CC
Q 010864 367 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL-TL 445 (498)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 445 (498)
+.|+|--.+...-. ..|+++||+|-.+.-......|-.... -..+.| ......|.|.|=++|.+...- +-
T Consensus 14 k~G~L~~q~q~~fg---kKWrk~w~vLy~~S~~GvaRLE~yd~~--ek~~r~----~~~rrVIrLsdCisV~~~~~e~~~ 84 (127)
T 2d9w_A 14 KQGFLYLQQQQTFG---KKWRRFGASLYGGSDCALARLELQEGP--EKPRRC----EAARKVIRLSDCLRVAEAGGEASS 84 (127)
T ss_dssp EEEEEEECBCSSSS---CBCCEEEEEEECCSSSSCCEEEEECCC--SCSSSC----SCCEEEECGGGEEEEEECCSCSSS
T ss_pred cceEEEecccchhh---hhhheeEEEEecCCCCCceeeeeeecc--CccccC----CCCceEEEhhhCCeEecccCccCC
Confidence 45555544322222 259999999976544443333332210 000111 124678999999999998776 66
Q ss_pred C-CCCeeeEeecCCceeeeecChhhhhhHHHHHHHH
Q 010864 446 P-PGAGLCIETIHGPVFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 446 p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 480 (498)
| -.++|+|+|-...++|-|++ ..++.|..+|-.+
T Consensus 85 pk~~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 85 PRDTSAFFLETKERLYLLAAPA-AERGDWVQAICLL 119 (127)
T ss_dssp CSSCEEEEEEESSCEEEEEECH-HHHHHHHHHHHHH
T ss_pred CCcceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHH
Confidence 7 56789999888766777775 5899999999765
No 265
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=95.53 E-value=0.0073 Score=53.31 Aligned_cols=84 Identities=11% Similarity=0.134 Sum_probs=49.0
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccc-cccccCCCCCCCCeeeEeecCCcee
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVS-VSACADLTLPPGAGLCIETIHGPVF 461 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~ 461 (498)
...|.++||+|....|..+....... ......|+|..+.+ ++.. .......++|.|.|.....|
T Consensus 26 ~k~WkkRwfvL~~~~L~yyk~~~~~~--------------~~~~g~i~l~~~~~~~~~~-~~~~~~~~~F~I~t~~r~~~ 90 (168)
T 2j59_M 26 IRPWKQMYVVLRGHSLYLYKDKREQT--------------TPSEEEQPISVNACLIDIS-YSETKRKNVFRLTTSDCECL 90 (168)
T ss_dssp --CCEEEEEEEETTEEEEESCTTCC----------------------CEECSSCEEEEC-SSSCSCSSEEEEECSSCEEE
T ss_pred CCCceEEEEEEeCCEEEEEECCcccc--------------cccCCceEecccceEEEec-cccCCCCCEEEEEeCCceEE
Confidence 45799999999887666544322100 00112233333211 1111 11123567899987766568
Q ss_pred eeecChhhhhhHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~ 481 (498)
|.|+|.++++.|++||+-+.
T Consensus 91 l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 91 FQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp EECSSHHHHHHHHHHHHHHC
T ss_pred EEcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998664
No 266
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=95.52 E-value=0.0059 Score=58.36 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=64.4
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchh-------hhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccc
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE-------GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVS 438 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (498)
...|||.-. ..|+++||+|... .|..+........ + .......|+|.++.++.
T Consensus 11 ~k~G~L~K~---------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~--------~---~~~p~g~I~L~~~~~V~ 70 (264)
T 1qqg_A 11 RKVGYLRKP---------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRH--------K---SSAPKRSIPLESCFNIN 70 (264)
T ss_dssp EEEEEEECT---------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHT--------T---CSCCSEEEEGGGEEEEE
T ss_pred cEEEEEEEC---------CCCEeEEEEEECCCCCCCCCEEEEECCCccccc--------c---ccCcceEEEeeceEEEE
Confidence 346777643 5899999999876 4444332221110 0 01235568888887776
Q ss_pred cccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHH
Q 010864 439 ACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIY 484 (498)
Q Consensus 439 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 484 (498)
+..+ -...++|.|.|.....||.|+|.++++.|++||..+..=.
T Consensus 71 ~~~~--~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 71 KRAD--SKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp EECC--SSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred eccC--CCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 6544 2356789998876667999999999999999999875543
No 267
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.47 E-value=0.14 Score=51.62 Aligned_cols=95 Identities=9% Similarity=-0.006 Sum_probs=79.4
Q ss_pred hccHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPED----------------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKK 194 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~----------------------~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~ 194 (498)
.|+.+.|+..+.+|+.+-... ..+...++..+...|+ +.+|+..
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~--------------~~~a~~~ 193 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGR--------------ASAVIAE 193 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------HHHHHHH
Confidence 467778888888888764211 1244566777888888 9999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010864 195 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN 249 (498)
Q Consensus 195 ~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~ 249 (498)
+.+++..+|-+-.+|..|-.+|.. .|+..+|+..|++....+.+-+.++|.
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~----~Gr~~~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYL----SDRQSDALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999 999999999999998888888888885
No 268
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=95.44 E-value=0.0074 Score=50.54 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=54.3
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCC---c
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHG---P 459 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~ 459 (498)
...|+++||+|....|..+......... ....| ......|+|.... ++.+.+-....-++|.|.+... .
T Consensus 25 ~k~Wk~RwfVL~~~~L~yyk~~~~~~~e---~~plg----~~~~G~I~L~~~~-v~~~~~~~~~k~~~F~I~~~~~~~~~ 96 (124)
T 2w2x_D 25 DQKWTRHFCAIADAKLSFSDDIEQTMEE---DNPLG----SLCRGILDLNTYN-VVKAPQGKNQKSFVFILEPKQQGDPP 96 (124)
T ss_dssp TTEEEEEEEEEETTEEEEEEEHHHHHHC---SSCCC----CSCSEEEEGGGEE-EEECTTCBTTBSEEEEEEECC--CCC
T ss_pred CCCceEeEEEEECCEEEEEccccccccc---ccccC----CccccEEECCCCE-EEEccCCcCCCCEEEEEECCCCCCce
Confidence 3579999999988777665543321100 00011 1124456666443 3333332223446888876443 3
Q ss_pred eeeeecChhhhhhHHHHHHHHH
Q 010864 460 VFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 460 ~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.||.|+|.++++.|+.||+-+.
T Consensus 97 ~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 97 VEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp EEEEECCCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHH
Confidence 5799999999999999999653
No 269
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.36 E-value=0.0077 Score=48.79 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=54.0
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-. ....|+++||+|....|..+...... ......|++... .+++..+ -
T Consensus 9 ~~~G~L~K~-------~~k~Wk~RwfvL~~~~L~yyk~~~~~---------------~~~~~~i~l~~~-~v~~~~~--~ 63 (107)
T 2cof_A 9 ETSSYLNVL-------VNSQWKSRWCSVRDNHLHFYQDRNRS---------------KVAQQPLSLVGC-EVVPDPS--P 63 (107)
T ss_dssp TTCCEEEEE-------ETTEEEEEEEEECSSCEEEECSSTTC---------------SEEEEEECTTTC-EEECCCB--T
T ss_pred cEeEEEEEe-------cCCCcceEEEEEECCEEEEEeCCccc---------------CCCeeEEeccce-EEEECCC--C
Confidence 346666542 24589999999987766543322110 011223333221 1333222 1
Q ss_pred CCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010864 446 PPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 446 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 480 (498)
...++|.|.|..+. .||.|+|.++++.|++||+-+
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 99 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 25578888875344 599999999999999999854
No 270
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=95.34 E-value=0.017 Score=48.74 Aligned_cols=93 Identities=22% Similarity=0.275 Sum_probs=55.8
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-ee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-FL 462 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~ 462 (498)
..|.++||+|....|..+-.......+.. .+. ....+...|+|.... ++...|-+ ...++|.|.|..+.. ||
T Consensus 32 k~Wk~rwfvL~~~~L~yykd~~~~~~~~~----~~~-~~~~p~g~I~L~~~~-v~~~~~~~-kr~~~F~l~t~~~~~yl~ 104 (129)
T 2p0d_A 32 KNWGPSWVVLTGNSLVFYREPPPTAPSSG----WGP-AGSRPESSVDLRGAA-LAHGRHLS-SRRNVLHIRTIPGHEFLL 104 (129)
T ss_dssp CCCEEEEEEEESSEEEEESCC-------------------CCSEEEECTTCE-EEECTTSC-SSSSEEEEECTTSCEEEE
T ss_pred CCceEEEEEEeCCEEEEEcCccccccccc----ccc-cCCCCccEEEeCCcE-EEECCCCC-CCCcEEEEEcCCCCEEEE
Confidence 68999999998877765443322110000 000 011234466666433 22222222 356899999888865 67
Q ss_pred eecChhhhhhHHHHHHHHHHH
Q 010864 463 VADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 463 ~~~~~~~~~~~~~a~~~~~~~ 483 (498)
.|+|.++++.|+.||.-+..-
T Consensus 105 qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 105 QSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp ECSCHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999977553
No 271
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=95.32 E-value=0.012 Score=47.17 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=48.4
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCc-eee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGP-VFL 462 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~ 462 (498)
..|+++||+|....|..+....... ......|+|. ..++.+..+ .++.|.|.|..+. .||
T Consensus 13 k~Wk~R~fvL~~~~L~Yy~~~~~~~--------------~~~~g~i~L~-~~~v~~~~~----~~~~F~i~~~~~r~~~l 73 (103)
T 3rcp_A 13 TGWQPRWFVLDNGILSYYDSQDDVC--------------KGSKGSIKMA-VCEIKVHSA----DNTRMELIIPGEQHFYM 73 (103)
T ss_dssp TCEEEEEEEEETTEEEEESSCC-----------------CCCSCEEEGG-GCEEECCTT----CSSEEEEEETTTEEEEE
T ss_pred CCeeceEEEEECCEEEEEecCCccc--------------CCcccEEEee-eeEEEEcCC----CCceEEEEeCCCCEEEE
Confidence 4799999999976666544332210 0112344443 233322211 3567888764344 488
Q ss_pred eecChhhhhhHHHHHHHHH
Q 010864 463 VADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 463 ~~~~~~~~~~~~~a~~~~~ 481 (498)
.|+|.++++.|+.||+.+.
T Consensus 74 ~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 74 KAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp ECSSHHHHHHHHHHHHTTS
T ss_pred ECCCHHHHHHHHHHHHHHH
Confidence 9999999999999998653
No 272
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=95.31 E-value=0.013 Score=48.78 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=49.0
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCC----
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHG---- 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---- 458 (498)
...|+++||+|....|..+..... ......|+|.++. +..+.+. ...++|.|.+..+
T Consensus 18 ~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~--~~~~~f~i~~~~~~~~~ 78 (127)
T 1fgy_A 18 VKTWKRRWFILTDNCLYYFEYTTD----------------KEPRGIIPLENLS-IREVLDP--RKPNCFELYNPSHKGQV 78 (127)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEEECCS--SCSSEEEEECSSSTTCC
T ss_pred CCCeEEEEEEEECCEEEEeCCCCC----------------CCcceEEECCceE-EEEccCC--CCCceEEEecCCccccc
Confidence 357999999998776665443221 1123345666542 2222221 2345565554332
Q ss_pred ------------------ceeeeecChhhhhhHHHHHHHHH
Q 010864 459 ------------------PVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 459 ------------------~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
..||.|+|.++++.|++||+-+.
T Consensus 79 ~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i 119 (127)
T 1fgy_A 79 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 119 (127)
T ss_dssp CCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 24889999999999999998653
No 273
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=95.30 E-value=0.011 Score=54.50 Aligned_cols=82 Identities=7% Similarity=0.119 Sum_probs=54.1
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccccc-CCCCCCCCeeeEeecCCce-e
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-DLTLPPGAGLCIETIHGPV-F 461 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~-~ 461 (498)
..|+++||+|....|..+..... ......|+|..+..+.... ...-...++|.|.|..+.+ |
T Consensus 124 k~WkkRwfVL~~~~L~Yyk~~~~----------------~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~ 187 (211)
T 1u5e_A 124 FEWQKRWCALSKTVFYYYGSDKD----------------KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQ 187 (211)
T ss_dssp CCCEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEE
T ss_pred CCcEeEEEEEECCEEEEEcCCCC----------------ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEE
Confidence 47999999998766655433221 1124456776666554221 1111245788888765454 7
Q ss_pred eeecChhhhhhHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~ 481 (498)
|.|+|.++++.|++||+.+.
T Consensus 188 l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 188 FTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHH
Confidence 89999999999999998764
No 274
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=95.30 E-value=0.013 Score=48.00 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=51.2
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccccc-CCCCCCCCeeeEeecCCc-e
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-DLTLPPGAGLCIETIHGP-V 460 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~-~ 460 (498)
...|.++||+|....|..+...... .....|+|.... +..|. ...-.+-++|.|.+..+. .
T Consensus 17 ~k~Wk~rwfvL~~~~L~~yk~~~~~----------------~p~~~i~l~~~~-~~~~~~~~~~~r~~~F~l~~~~~~~y 79 (112)
T 3cxb_B 17 KEHWKTCFVVLSNGILYQYPDRTDV----------------IPLLSVNMGGEQ-CGGCRRANTTDRPHAFQVILSDRPCL 79 (112)
T ss_dssp CCCCEEEEEEEETTEEEEESSSSCC----------------SCSEEEETTC-C-EEEEEECCCSSCTTEEEEEETTSCCE
T ss_pred CCCceEEEEEEECCEEEEECCCCCC----------------CccceEEecCCE-EEeeeccCCCCCCeEEEEEcCCCCEE
Confidence 4689999999987665544332211 112234444221 11111 112346689999876665 4
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010864 461 FLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 461 ~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
+|.|+|.++++.|+.||+.+..
T Consensus 80 ~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 80 ELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp EEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHHHHHHHHHhh
Confidence 8899999999999999986643
No 275
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.30 E-value=0.019 Score=48.06 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=56.8
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhc----ccchhhccccccCCCCCCCCCCccccccCCcc--ccccc
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQAS----KNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDI--VSVSA 439 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 439 (498)
...|||..... .....|+++||||....|.... .... ..+.-.|+|+.. ..+++
T Consensus 9 ~~~G~L~KqG~----~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~----------------~~p~G~I~L~g~tV~~~~~ 68 (126)
T 1wi1_A 9 KHSGYLWAIGK----NVWKRWKKRFFVLVQVSQYTFAMCSYREKK----------------AEPQELLQLDGYTVDYTDP 68 (126)
T ss_dssp EEEEEEEEECS----SSCCSCEEEEEEEEEEETTEEEEEECCSSS----------------SCCSEEEECSSCEEEECCC
T ss_pred ceeEEEEEeCC----CcccccceEEEEEeCCEEEEEEcccccccC----------------CCCceEEECCCcEEEEecC
Confidence 45677764311 1225899999999987776643 1111 112334566642 12223
Q ss_pred ccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 440 CADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 440 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
..+. ...-++|.+.+..-..||-|||.++++.|+.||.-+.
T Consensus 69 ~~~~-~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 69 QPGL-EGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp CSSC-CSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred Cccc-ccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHh
Confidence 2222 3456778766433335888899999999999998653
No 276
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=95.29 E-value=0.0072 Score=58.34 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=51.2
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccc--c----cCCCCCCCCeeeEeecC
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSA--C----ADLTLPPGAGLCIETIH 457 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~p~~~~~~~~~~~ 457 (498)
..|+++||+|....|..+....... ....|++.++..+.. . .....|..++|+|.+..
T Consensus 182 k~WkkR~fvL~~~~L~yyk~~~~~~----------------~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~ 245 (291)
T 3tca_A 182 KSWKRRYFLLRASGIYYVPKGKTKT----------------SRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQ 245 (291)
T ss_dssp SCEEEEEEEECSSEEEECCTTCCSS----------------TTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTT
T ss_pred CCceEEEEEEeCCEEEEEecCcccc----------------ccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCC
Confidence 4799999999887776543322211 111223322222111 1 11355677899997543
Q ss_pred C------ceeeeecChhhhhhHHHHHHHHH
Q 010864 458 G------PVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 458 ~------~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
. -.||.|+|.++++.|+.||+++-
T Consensus 246 ~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 246 IQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp CCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 2 15899999999999999999874
No 277
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=95.18 E-value=0.013 Score=50.40 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=59.1
Q ss_pred hhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC--C
Q 010864 367 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL--T 444 (498)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 444 (498)
..|||.-...... .....|+++||+|....|..+..... ......|+|..+. +..+.+. .
T Consensus 19 ~~G~L~K~g~~~~-~~~k~WkkR~fvL~~~~L~yyk~~~~----------------~~~~g~i~L~~~~-v~~~~~~~~~ 80 (148)
T 1u5f_A 19 KAGYLEKRRKDHS-FLGFEWQKRWCALSKTVFYYYGSDKD----------------KQQKGEFAIDGYD-VRMNNTLRKD 80 (148)
T ss_dssp EEEEEEEECCCSS-CSSCSEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEECTTSCSS
T ss_pred EEEEEEEeCCCCC-CcCCCceeEEEEEECCEEEEEcCCCC----------------cccceEEEcCCcE-EEECCCcccC
Confidence 4677764321111 01258999999998766655432211 1123456666553 3222221 1
Q ss_pred CCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010864 445 LPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 445 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
-...++|.|.|..+. .||.|+|.++++.|++||+.+..
T Consensus 81 ~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 81 GKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp TTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 123478999876654 47899999999999999998754
No 278
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.10 E-value=0.02 Score=47.58 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=53.7
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-e
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 461 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~ 461 (498)
...|+++||+|....|..+........ |.... ....|++.. ..++.+.+ .-...++|.|.|..|.+ +
T Consensus 29 ~~~Wk~rwfvL~~~~L~yyk~~~~~~~--------~~~~~--~~~~i~l~~-~~~~~~~~-~~~r~~~F~i~~~~~~~~~ 96 (123)
T 1wjm_A 29 NRSWQNVYCVLRRGSLGFYKDAKAASA--------GVPYH--GEVPVSLAR-AQGSVAFD-YRKRKHVFKLGLQDGKEYL 96 (123)
T ss_dssp CCCCEEEEEEEETTEEEEESSHHHHTT--------TCBSS--SCCCEECTT-CEEEECTT-CSSCSSEEEEECSSSCEEE
T ss_pred CCCccEEEEEEECCEEEEEEccccccc--------CcccC--CCceEEccC-cEEeeccc-ccCCCCEEEEEEcCCcEEE
Confidence 458999999998877765543332210 00000 112233321 11222222 12367899999887755 7
Q ss_pred eeecChhhhhhHHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~~ 482 (498)
|.|+|.+++..|++||..+..
T Consensus 97 f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 97 FQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp EECSSHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHh
Confidence 899999999999999997654
No 279
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=95.08 E-value=0.0094 Score=55.64 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=56.0
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCceeee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLV 463 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 463 (498)
..|+++||+|....|..+..... ......|+|..+..+.... ...++|.|.|.....||.
T Consensus 77 k~WkkRwfvL~~~~L~Yyk~~~~----------------~~~~g~I~L~~~~~v~~~~----~k~~~F~I~t~~r~~~l~ 136 (228)
T 3tfm_A 77 RNWKKRWFVLRQSKLMYFENDSE----------------EKLKGTVEVRSAKEIIDNT----NKENGIDIIMADRTFHLI 136 (228)
T ss_dssp GGCEEEEEEECSSEEEEESSTTC----------------CSEEEEEEGGGCSEEEEET----TTTSEEEEECSSCEEEEE
T ss_pred CCceEEEEEEeCCEEEEEeCCCC----------------cceeEEEEcCCCEEeccCC----CCCcEEEEEcCCcEEEEE
Confidence 78999999998766655432211 1234467777666554322 356789998765556999
Q ss_pred ecChhhhhhHHHHHHHHHH
Q 010864 464 ADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 464 ~~~~~~~~~~~~a~~~~~~ 482 (498)
|+|.++++.|++||+-+..
T Consensus 137 A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 137 AESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp CSSHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHh
Confidence 9999999999999997764
No 280
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.03 E-value=0.12 Score=53.70 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010864 160 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 239 (498)
Q Consensus 160 a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~ 239 (498)
.+..+|.+...... +..|..+|.+|+.++|++...|+.||.+... .|+.-+|+ -+
T Consensus 154 ~l~~LGDL~RY~~~--------------~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~----~~~~l~a~-------y~ 208 (497)
T 1ya0_A 154 CLVHLGDIARYRNQ--------------TSQAESYYRHAAQLVPSNGQPYNQLAILASS----KGDHLTTI-------FY 208 (497)
T ss_dssp HHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH----TTCHHHHH-------HH
T ss_pred HHHHcccHHHHHHH--------------HHHHHHHHHHHHHhCCCCCchHHHHHHHHhc----ccccHHHH-------HH
Confidence 45677888888877 9999999999999999999999999999999 99998888 68
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHh
Q 010864 240 YEKAVQLNWNSPQALNNWGLALQEL 264 (498)
Q Consensus 240 ~~~Al~l~P~~~~a~~~lg~~l~~~ 264 (498)
|-+++....-++.+..||..++.+.
T Consensus 209 y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 209 YCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChhHHHHHHHHHHHH
Confidence 8888877766889999998888763
No 281
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.98 E-value=0.018 Score=47.10 Aligned_cols=92 Identities=13% Similarity=0.233 Sum_probs=54.1
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.--... ....|+++||+|....|..+...... ....|.+... .+.+..+
T Consensus 11 ~~~G~L~K~~~~----~~k~WkkR~fvL~~~~L~yyk~~~~~-----------------~~~~i~l~~~-~v~~~~~--- 65 (114)
T 2da0_A 11 EKKGYLLKKSDG----IRKVWQRRKCSVKNGILTISHATSNR-----------------QPAKLNLLTC-QVKPNAE--- 65 (114)
T ss_dssp CEEEEEEEECSS----SCCCEEEEEEEEETTEEEECCSSCCS-----------------CCEEEETTTS-EEEECSS---
T ss_pred cEEEEEEEeCCC----CCCCceeEEEEEeCCEEEEEcCCCCC-----------------CCCEEEeeee-EEEECCC---
Confidence 346776643211 12589999999977666554331110 1111121111 0111111
Q ss_pred CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010864 446 PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 483 (498)
Q Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 483 (498)
..++|.|.|.....||.|+|.++++.|++||+-+..-
T Consensus 66 -~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 66 -DKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp -SSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 3468888875545699999999999999999976543
No 282
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=94.83 E-value=0.023 Score=45.53 Aligned_cols=85 Identities=13% Similarity=0.225 Sum_probs=49.9
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-e
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 461 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~ 461 (498)
...|.++||+|....|..+........ +.. ......|++.... ++...+ .-...++|.|.|..+.+ |
T Consensus 20 ~~~Wk~rwfvL~~~~L~yyk~~~~~~~--------~~~--~~~~~~i~l~~~~-~~~~~~-~~~~~~~F~i~~~~~~~~~ 87 (106)
T 1btn_A 20 SRSWHNVYCVINNQEMGFYKDAKSAAS--------GIP--YHSEVPVSLKEAI-CEVALD-YKKKKHVFKLRLSDGNEYL 87 (106)
T ss_dssp CCCCEEEEEEEETTEEEEESSHHHHHH--------TCC--SSSCCCEECTTCE-EEECSS-CCSSSSEEEEECTTSCEEE
T ss_pred CCChhEEEEEEECCEEEEEeCCccccc--------CCC--CCCcceEECCCCE-EEEccc-ccCCccEEEEEecCCCEEE
Confidence 457999999998776665543332110 000 0012223332211 111111 12356789998877554 8
Q ss_pred eeecChhhhhhHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRL 479 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~ 479 (498)
|.|+|.+++..|++||+-
T Consensus 88 ~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 88 FQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp EECSSHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHhc
Confidence 899999999999999973
No 283
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=94.82 E-value=0.022 Score=47.38 Aligned_cols=86 Identities=13% Similarity=0.280 Sum_probs=51.8
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCC------CCCCCeeeEeec
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT------LPPGAGLCIETI 456 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~~ 456 (498)
...|.++||||...-|..+-..+... ...+...|+|.+-.-..++.+-+ .+.++.|.|.+.
T Consensus 19 ~k~W~~rwfVL~~~~L~yyK~~~~~~-------------d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~ 85 (120)
T 4a6h_A 19 LKSYSKGYYVLTPNFLHEFKTADRKK-------------DLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAK 85 (120)
T ss_dssp TTEEEEEEEEECSSEEEEESSCCTTT-------------CCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEES
T ss_pred CCCCccEEEEEeCCEEEEEcCCCcCc-------------CCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeC
Confidence 34799999999887555443322210 01123456665433222222211 246778888765
Q ss_pred CC-------ceeeeecChhhhhhHHHHHHHHH
Q 010864 457 HG-------PVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 457 ~~-------~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.. ..+|.|+|.++++.|++||+-+-
T Consensus 86 ~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 86 QNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 52 35999999999999999999763
No 284
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.79 E-value=0.053 Score=44.99 Aligned_cols=80 Identities=24% Similarity=0.319 Sum_probs=58.5
Q ss_pred hhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC-CCC---CeeeEeecCCce
Q 010864 385 DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL-PPG---AGLCIETIHGPV 460 (498)
Q Consensus 385 ~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~---~~~~~~~~~~~~ 460 (498)
.|+|....||...+.-... +. ...--..|||.+|.+|+++.++++ |++ +.|.+.| +.-+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~-e~---------------~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T-~~~~ 85 (129)
T 2d9z_A 23 LRKRHYWRLDSKCLTLFQN-ES---------------GSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT-DTMV 85 (129)
T ss_dssp CCEEEEEEEESSCEEEESC-SS---------------CCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC-SSCE
T ss_pred cccceeeEecCCeEEEEec-CC---------------CCceeceeeHHHhcccccccCccccCCCCCCceEEEEE-CCEE
Confidence 4777778888766554322 11 012244699999999999999876 544 8899997 6778
Q ss_pred eeeecC----------------hhhhhhHHHHHHHHH
Q 010864 461 FLVADS----------------WEALDGWLDAIRLVY 481 (498)
Q Consensus 461 ~~~~~~----------------~~~~~~~~~a~~~~~ 481 (498)
|+|.++ .+.+..|-.||+.+.
T Consensus 86 y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 86 YFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp EEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 999873 477888999999864
No 285
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.49 E-value=0.9 Score=42.93 Aligned_cols=119 Identities=12% Similarity=-0.022 Sum_probs=86.8
Q ss_pred HHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010864 134 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 213 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg 213 (498)
+.+.|.+++|+......++.+|.|+.....+-.++.-.|+ +++|.+-++.+.+++|.....-..+-
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~--------------w~RA~~QL~~~a~l~p~~~~~a~~yr 72 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGD--------------FERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 4567999999999999999999999999999999999999 99999999999999999765433322
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH---hcCC------CCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHH
Q 010864 214 IAISDRAKMRGRTKEAEELWKQATKNYEKAV---QLNW------NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 284 (498)
Q Consensus 214 ~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al---~l~P------~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~ 284 (498)
.+... +.++..+ +..| ........-+......|+. ++|...-
T Consensus 73 ~lI~a-------------------E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~----------~~A~~lr 123 (273)
T 1zbp_A 73 HLVKA-------------------AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDY----------EQVSELA 123 (273)
T ss_dssp HHHHH-------------------HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCH----------HHHHHHH
T ss_pred HHHHH-------------------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCH----------HHHHHHH
Confidence 22211 1333333 1112 1222333444555566888 9999999
Q ss_pred HHHHHhcCCCH
Q 010864 285 RAAIQLQFDFH 295 (498)
Q Consensus 285 ~~Al~l~P~~~ 295 (498)
.+|++..|..+
T Consensus 124 ~~A~e~ap~~~ 134 (273)
T 1zbp_A 124 LQIEELRQEKG 134 (273)
T ss_dssp HHHHHHCCCCC
T ss_pred HHHHhcCcccC
Confidence 99999987754
No 286
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.26 E-value=0.39 Score=52.39 Aligned_cols=89 Identities=15% Similarity=-0.015 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHhc
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELS 265 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~--l~P~~~~a~~~lg~~l~~~g 265 (498)
+++|.+..+ .-++...|.++|..+.+ .|+++.|+.+|.++ ..|..+.. ....+...+..++......|
T Consensus 668 ~~~A~~~~~-----~~~~~~~W~~la~~al~----~~~~~~A~~~y~~~-~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 668 LTLARDLLT-----DESAEMKWRALGDASLQ----RFNFKLAIEAFTNA-HDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHHHHHT-----TCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHH-TCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH-----hhCcHhHHHHHHHHHHH----cCCHHHHHHHHHHc-cChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 888877643 34677899999999999 99999999877654 22333222 22557777778888888888
Q ss_pred CcchH---HhhhhhHHHHHHHHHH
Q 010864 266 AIVPA---REKQTIVRTAISKFRA 286 (498)
Q Consensus 266 ~~~~a---~~~~~~~~~Ai~~~~~ 286 (498)
++..| +.+.|++++|++.|.+
T Consensus 738 ~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 738 KFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chHHHHHHHHHcCCHHHHHHHHHH
Confidence 88443 2334555555555443
No 287
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=94.17 E-value=0.043 Score=45.03 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=48.7
Q ss_pred chhhhhhhhccchhh---hhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCC-CCCeeeEeecCC
Q 010864 383 HSDWKRSQFVLNHEG---LQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIETIHG 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~ 458 (498)
...|+++||+|.... |..+..... ..+...|||... .|..+....-+ ..++|.|- ..+
T Consensus 20 ~~~WkkrWfVL~~~~~~~Ly~Yk~~~d----------------~~p~g~I~L~g~-~V~~~~~~~~~~~~~~Fki~-~~~ 81 (112)
T 2coc_A 20 GETWSEVWAAIPMSDPQVLHLQGGSQD----------------GRLPRTIPLPSC-KLSVPDPEERLDSGHVWKLQ-WAK 81 (112)
T ss_dssp SSCEEEEEEECCTTCTTCEEEECCTTC----------------SSSCSEECGGGC-EEECCCSSSCCSSSEEEEEE-ETT
T ss_pred CCCceEEEEEEECCCccEEEEECCCCc----------------cCcceEEEcCCC-EEEecCcccccCCCCEEEEe-cCC
Confidence 457999999997632 332221111 123445666543 22221111122 56788877 334
Q ss_pred ce-eeeecChhhhhhHHHHHHHHH
Q 010864 459 PV-FLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 459 ~~-~~~~~~~~~~~~~~~a~~~~~ 481 (498)
-+ ||.|+|.++++.|+.+|..+.
T Consensus 82 ~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 82 QSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHh
Confidence 34 999999999999999998753
No 288
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.08 E-value=0.6 Score=50.85 Aligned_cols=121 Identities=12% Similarity=-0.044 Sum_probs=73.3
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH--------hCCCCHH
Q 010864 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR--------LCPTLHD 207 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~--------l~p~~~~ 207 (498)
..|++++|.+..+ ..++...|..+|..+...++ ++.|+.+|.++-. ...++.+
T Consensus 664 ~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~--------------~~~A~~~y~~~~d~~~l~~l~~~~~~~~ 724 (814)
T 3mkq_A 664 KVGQLTLARDLLT-----DESAEMKWRALGDASLQRFN--------------FKLAIEAFTNAHDLESLFLLHSSFNNKE 724 (814)
T ss_dssp HHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHTCHHHHHHHHHHTTCHH
T ss_pred hcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCC--------------HHHHHHHHHHccChhhhHHHHHHcCCHH
Confidence 4566666666543 34788999999999999999 9999999998721 1233344
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchH---HhhhhhHHHHHHHH
Q 010864 208 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA---REKQTIVRTAISKF 284 (498)
Q Consensus 208 a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a---~~~~~~~~~Ai~~~ 284 (498)
.+..++..... .|++..|.. ++.+.|++++| +.+.+++++|+..-
T Consensus 725 ~~~~~~~~a~~----~~~~~~A~~----------------------------~~~~~g~~~~a~~~~~~~~~~~~A~~lA 772 (814)
T 3mkq_A 725 GLVTLAKDAET----TGKFNLAFN----------------------------AYWIAGDIQGAKDLLIKSQRFSEAAFLG 772 (814)
T ss_dssp HHHHHHHHHHH----TTCHHHHHH----------------------------HHHHHTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHH----cCchHHHHH----------------------------HHHHcCCHHHHHHHHHHcCChHHHHHHH
Confidence 44444444444 555555553 23334444433 33344448887765
Q ss_pred HHHHHhcCCC---HHHHHHHHHHHHHcch
Q 010864 285 RAAIQLQFDF---HRAIYNLGTVLYGLAE 310 (498)
Q Consensus 285 ~~Al~l~P~~---~~a~~~Lg~~~~~~g~ 310 (498)
++ ..|.. ..+....+.-+...|+
T Consensus 773 ~~---~~~~~~~i~~~~~~~~~~L~~~~~ 798 (814)
T 3mkq_A 773 ST---YGLGDNEVNDIVTKWKENLILNGK 798 (814)
T ss_dssp HH---TTCCHHHHHHHHHHHHHHHHTTTC
T ss_pred HH---hCCChHHHHHHHHHHHHHHHhccc
Confidence 53 45443 3555556666666664
No 289
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=94.03 E-value=0.017 Score=48.06 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=54.9
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchh-hhhhhcccchhhccccccCCCCCCCCCCccccccCCccccccc-ccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE-GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSA-CADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 443 (498)
...|||.--. .....|+++||+|... .|..+...... .....|||..+.-+.. +...
T Consensus 9 ~~~G~L~K~g-----~~~k~WkkRwfvL~~~~~L~yy~~~~~~----------------~~~g~i~L~~~~~~~~~~~~~ 67 (125)
T 1unq_A 9 VKEGWLHKRG-----EYIKTWRPRYFLLKNDGTFIGYKERPQD----------------VDQREAPLNNFSVAQCQLMKT 67 (125)
T ss_dssp EEEEEEEEEC-----SSSCCEEEEEEEEETTSEEEEESSCCCS----------------HHHHTSCSEEEECTTCEEEEE
T ss_pred eEEeeEEecc-----CCccCccCcEEEEecCCEEEEEeCCCCC----------------CCCceeEccceeEEeeeeccc
Confidence 3467776421 1245799999999843 44433221110 1123345554432211 0001
Q ss_pred CCCCCCeeeEeec---CC-ceeeeecChhhhhhHHHHHHHHHH
Q 010864 444 TLPPGAGLCIETI---HG-PVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 444 ~~p~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
.-...++|.|.+. .+ ..||.|+|.++++.|++||+-+..
T Consensus 68 ~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~ 110 (125)
T 1unq_A 68 ERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 110 (125)
T ss_dssp CSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 1245678888753 22 248999999999999999997754
No 290
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=93.77 E-value=0.056 Score=54.52 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=62.4
Q ss_pred chhhhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccc---c
Q 010864 363 LPYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVS---A 439 (498)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 439 (498)
...+..|||.-.... ....|+++||+|....|..+...... .....|+|..+..+- .
T Consensus 267 ~~~~k~G~L~K~g~~----~~k~WKkRwFVL~~~~L~YYk~~~d~----------------~~~G~I~L~~~~~~~~v~~ 326 (386)
T 3lju_X 267 RNYLKEGYMEKTGPK----QTEGFRKRWFTMDDRRLMYFKDPLDA----------------FARGEVFIGSKESGYTVLH 326 (386)
T ss_dssp CCCSEEEEEEECCTT----SCSCCEEEEEEEETTEEEEESSTTCS----------------BCSEEEECCCGGGTCEEEE
T ss_pred cccceeeeEEEECCC----CCCCCcccEEEEECCEEEEEecCCCc----------------ccceEEEeecceeeeeecc
Confidence 334568888754211 12589999999997777665432221 123456665554432 2
Q ss_pred ccCCCCC---CCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 440 CADLTLP---PGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 440 ~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
+...+.. ..++|.|.|..-..||.|+|.++++.|++||+-|.
T Consensus 327 ~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i 371 (386)
T 3lju_X 327 GFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAV 371 (386)
T ss_dssp SCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1212221 14788888765556999999999999999999764
No 291
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=93.71 E-value=0.06 Score=51.27 Aligned_cols=89 Identities=17% Similarity=0.216 Sum_probs=54.5
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-ee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-FL 462 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~ 462 (498)
..|+++||+|....|..+-...... ......+...|+|..- .+..+.+-+ -..++|.|.|..+.+ +|
T Consensus 37 K~WkrRWfVL~~~~L~yyK~~~~~~----------~~~~~~p~g~I~L~~~-~v~~~~~~~-kk~~~F~I~t~~~r~y~f 104 (263)
T 3a8p_A 37 RKWKQYWVTLKGCTLLFYETYGKNS----------TEQNSAPRCALFAEDS-IVQSVPEHP-KKEHVFCLSNSCGDVYLF 104 (263)
T ss_dssp CCCEEEEEEEETTEEEEESSCCC----------------CCCSEEEECTTC-EEEECTTCS-SCSSEEEEECTTSCEEEE
T ss_pred CCceEEEEEEcCCEEEEEecCcccc----------cccccCccceEEcCCc-EEEECCcCC-CCCCEEEEEcCCCcEEEE
Confidence 4899999999887666544321100 0000112334666422 222222221 257899999866655 78
Q ss_pred eecChhhhhhHHHHHHHHHHHH
Q 010864 463 VADSWEALDGWLDAIRLVYTIY 484 (498)
Q Consensus 463 ~~~~~~~~~~~~~a~~~~~~~~ 484 (498)
.|+|.++++.|++||.-+....
T Consensus 105 ~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 105 QATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999876544
No 292
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=93.57 E-value=0.067 Score=44.25 Aligned_cols=81 Identities=27% Similarity=0.436 Sum_probs=57.9
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC-CCC---CeeeEeecCCc
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL-PPG---AGLCIETIHGP 459 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~---~~~~~~~~~~~ 459 (498)
..|+|..+.||...+.-...... ...-..|||.+|.+|++|.+.++ |++ +.|.+.| +.-
T Consensus 22 ~~rKRHYWrLD~K~Itlf~~e~~----------------~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T-~~~ 84 (125)
T 2coa_A 22 TLRKRHYWRLDCKCITLFQNNTT----------------NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVT-ANA 84 (125)
T ss_dssp CCCEEEEEEECSSEEEEESSSSC----------------SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEEC-SSC
T ss_pred ccccceeeEecCCeEEEEecCCC----------------CceeeeeehhHeecccccccccccCCCCCCceEEEEe-CCe
Confidence 36788888888766654322111 12344699999999999999886 544 7888887 566
Q ss_pred eeeeecC------h------hhhhhHHHHHHHHH
Q 010864 460 VFLVADS------W------EALDGWLDAIRLVY 481 (498)
Q Consensus 460 ~~~~~~~------~------~~~~~~~~a~~~~~ 481 (498)
+|+|..+ . +.+..|-.||+.+.
T Consensus 85 ~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 85 TYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp CCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred EEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 8989874 2 44888999999763
No 293
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.44 E-value=0.86 Score=45.71 Aligned_cols=81 Identities=16% Similarity=-0.013 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Q 010864 188 LEEACKKYDEATRLCPTL----------------------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ 245 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~----------------------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~ 245 (498)
.+.|...+.+|+.+-... ..+...++.++.. .|++.+++ ..+++++.
T Consensus 131 ~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~----~g~~~~a~-------~~l~~~~~ 199 (388)
T 2ff4_A 131 FEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIA----CGRASAVI-------AELEALTF 199 (388)
T ss_dssp HHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHH
Confidence 777777777777762210 1223334444555 88888888 68899999
Q ss_pred cCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHH
Q 010864 246 LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQ 289 (498)
Q Consensus 246 l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~ 289 (498)
.+|-+..++..+-.+|...|+. .+|+..|+++-+
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~----------~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQ----------SDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHH
Confidence 9999999999999999999999 999999988754
No 294
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=93.34 E-value=3.5 Score=41.46 Aligned_cols=78 Identities=21% Similarity=0.280 Sum_probs=49.6
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCc--e
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGP--V 460 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~ 460 (498)
...|.++||+|....+..+..... .....++|.. .+|.++.+ ..+.|+|.|-|..+. .
T Consensus 317 ~~~W~rrwfvl~~~~l~y~~~~~~-----------------~~~~~~~l~~-~~v~~~~~--~~r~~cF~i~~~~~~~~~ 376 (407)
T 4h8s_A 317 TTTWERLYFFTQGGNLMCQPRGAV-----------------AGGLIQDLDN-CSVMAVDC--EDRRYCFQITTPNGKSGI 376 (407)
T ss_dssp CEEEEEEEEEECSSCEECCCTTCS-----------------SCCCCBCSSC-CEEEEECC--TTCSSEEEEECTTSSCCE
T ss_pred CCCceEEEEEEECCEEEEEeCCCC-----------------CCCeEEECCc-eEEEECCC--CCCCceEEEEecCCCceE
Confidence 357999999998876665432111 0112233321 12333222 236688888876653 5
Q ss_pred eeeecChhhhhhHHHHHHHH
Q 010864 461 FLVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 461 ~~~~~~~~~~~~~~~a~~~~ 480 (498)
||-|+|.++++.|+.||.-+
T Consensus 377 ~l~A~s~~e~~~Wi~ai~~a 396 (407)
T 4h8s_A 377 ILQAESRKENEEWICAINNI 396 (407)
T ss_dssp EEECSSSHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHH
Confidence 88999999999999999865
No 295
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=93.21 E-value=0.071 Score=44.43 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=51.5
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCC---CCccccccCCccccccccc-CCCCCCCCeeeEeecCCc
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSP---DRRAIRIEVPDIVSVSACA-DLTLPPGAGLCIETIHGP 459 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~ 459 (498)
..|.++||+|....|.-+....... ..|.-.+ ......|+|.. ..++... |.+ -+-++|.|.|..|.
T Consensus 29 r~W~~~w~VL~~~~L~~yKd~~~~~-------~~~~~~~~~~~~~~~~i~L~~-a~v~~~~~d~~-krk~vF~l~t~~~~ 99 (124)
T 3pp2_A 29 KHWSASWTVLEGGVLTFFKDSKTSA-------AGGLRQPSKFSTPEYTVELRG-ATLSWAPKDKS-SRKNVLELRSRDGS 99 (124)
T ss_dssp CCCEEEEEEEETTEEEEESCSBCC----------CBCCGGGGCSEEEEEECTT-CEEEECCGGGC-SSSSEEEEECTTSC
T ss_pred CCceEEEEEEECCEEEEEecCcccc-------ccCccCcccccCCcceEEcCC-CEEEecccccC-CCceEEEEECCCCC
Confidence 4899999999876665543322211 0000000 01233455443 2223221 321 25689999988886
Q ss_pred ee-eeecChhhhhhHHHHHHHH
Q 010864 460 VF-LVADSWEALDGWLDAIRLV 480 (498)
Q Consensus 460 ~~-~~~~~~~~~~~~~~a~~~~ 480 (498)
.| |-|+|.+++..|+.+|.-+
T Consensus 100 ~ylfqA~s~~e~~~Wi~aI~~a 121 (124)
T 3pp2_A 100 EYLIQHDSEAIISTWHKAIAQG 121 (124)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHH
Confidence 64 5589999999999999864
No 296
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.66 Score=50.65 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH--------hCCCCHH----
Q 010864 140 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR--------LCPTLHD---- 207 (498)
Q Consensus 140 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~--------l~p~~~~---- 207 (498)
++.|+..+++....+|.... ++..+.+...... ...=-+|+....++++ +.+.+..
T Consensus 265 ~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~-----------~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~ 332 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHI-----------ETKELDMITILNETLDPLLSLLNDLPPRDADSARL 332 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTC-----------GGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHh-----------hhhhHHHHHHHHHHHHHhhhhhhhhcccccccccc
Confidence 68899999999999997643 3333333221111 0013456666666653 2333332
Q ss_pred ------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHH
Q 010864 208 ------AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 281 (498)
Q Consensus 208 ------a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai 281 (498)
.+..-+..+.. .|+++-|+ ++.++|+..-|....+|+.|+.+|..+|+| +.|+
T Consensus 333 ~~~~~~LL~~Qa~FLl~----K~~~elAL-------~~Ak~AV~~aPseF~tW~~La~vYi~l~d~----------e~AL 391 (754)
T 4gns_B 333 MNCMSDLLNIQTNFLLN----RGDYELAL-------GVSNTSTELALDSFESWYNLARCHIKKEEY----------EKAL 391 (754)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSSCHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred cCcchHHHHHHHHHHhc----cCcHHHHH-------HHHHHHHhcCchhhHHHHHHHHHHHHhccH----------HHHH
Confidence 22222444445 78888887 799999999999999999999999999999 8888
Q ss_pred HHHHHH
Q 010864 282 SKFRAA 287 (498)
Q Consensus 282 ~~~~~A 287 (498)
-.++-+
T Consensus 392 LtLNSc 397 (754)
T 4gns_B 392 FAINSM 397 (754)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 666554
No 297
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.81 E-value=1.8 Score=47.28 Aligned_cols=110 Identities=14% Similarity=0.090 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHHHHHHHh-cCCCCHH----------HHH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAIS-DRAKMRGRTKEAEELWKQATKNYEKAVQ-LNWNSPQ----------ALN 255 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~-~~~~~~g~~~eA~~~~~~Al~~~~~Al~-l~P~~~~----------a~~ 255 (498)
++.|+..+++..+.+|.....+ ....+.. . +...+--+|+....++++.+...+. +.+.+.. .+.
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~-~~~~i~~~~--~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~ 341 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYY-KTAMITILD--HIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLN 341 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHH-HHHHHHHHT--TCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHH-HHHHHHHHH--HhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHH
Confidence 6889999999999999764433 2222221 1 0012344566655555554444332 2333332 233
Q ss_pred HHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010864 256 NWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 310 (498)
Q Consensus 256 ~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~ 310 (498)
.-+..+...|++ +-|+.+-++|+.+.|.....|+.|+.+|..+|+
T Consensus 342 ~Qa~FLl~K~~~----------elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d 386 (754)
T 4gns_B 342 IQTNFLLNRGDY----------ELALGVSNTSTELALDSFESWYNLARCHIKKEE 386 (754)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCcH----------HHHHHHHHHHHhcCchhhHHHHHHHHHHHHhcc
Confidence 334444455666 999999999999999999999999999999999
No 298
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=92.21 E-value=0.23 Score=41.34 Aligned_cols=86 Identities=14% Similarity=0.278 Sum_probs=63.3
Q ss_pred CCchhhhhhhhccchhhhhhh---cccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCC-CCCeeeEeec
Q 010864 381 APHSDWKRSQFVLNHEGLQQA---SKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIETI 456 (498)
Q Consensus 381 ~~~~~w~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 456 (498)
.....|++|+++|-+.+.... .-..++. +..+++.|+...|..|+.|-.+-+| .-..|.+.+.
T Consensus 37 ~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk-------------ssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~ 103 (136)
T 1v5m_A 37 GGTAQWQKCRLLLRRAVAGERFRLEFFVPPK-------------ASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVE 103 (136)
T ss_dssp CCSCCCEEEEEEEEECSSSCCEEEEEESSTT-------------SSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCT
T ss_pred CcccchhheeeEEEEccCCCceEEEEecCCc-------------ccCCccccchhhhhhhhhccccccCCccceEEEEec
Confidence 345689999999977522110 0111111 1235789999999999999999999 7788999877
Q ss_pred CCc-eeeeecChhhhhhHHHHHHH
Q 010864 457 HGP-VFLVADSWEALDGWLDAIRL 479 (498)
Q Consensus 457 ~~~-~~~~~~~~~~~~~~~~a~~~ 479 (498)
.+- .+|-++|..++..|+..|+-
T Consensus 104 n~~eyi~ea~d~~q~~sWla~Ir~ 127 (136)
T 1v5m_A 104 NGAEYILETIDSLQKHSWVADIQG 127 (136)
T ss_dssp TSCBEEEECSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHh
Confidence 774 47778899999999999964
No 299
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=91.83 E-value=0.12 Score=42.92 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=57.3
Q ss_pred hhhhccccCCCCCCCCCCch-hhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 365 YLKAGYLTAPPAGIPVAPHS-DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~-~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
-.+.|+|.... .+-.. .|+++||||..+-|..+-..+.. ....-|||+.+. +..+.+-
T Consensus 12 VirkGWL~k~~----~g~~k~~wk~rWFVLt~~~L~yyKd~~ek----------------e~~G~IpL~~~~-vr~v~~~ 70 (125)
T 1dyn_A 12 VIRKGWLTINN----IGIMKGGSKEYWFVLTAENLSWYKDDEEK----------------EKKYMLSVDNLK-LRDVEKG 70 (125)
T ss_dssp EEEEEEEEESC----CCGGGTSSEEEEEEEESSEEEEESSTTCS----------------CEEEEEECTTEE-EEECCSC
T ss_pred eEEEEEEEEec----CccccCCceeeEEEEeccceeeecCCccc----------------ccceEEECCCce-EeccCCC
Confidence 35678877521 22233 59999999998888765544332 234456665433 2222222
Q ss_pred CCCCCCeeeEeecCC--------ceeeeecChhhhhhHHHHHH
Q 010864 444 TLPPGAGLCIETIHG--------PVFLVADSWEALDGWLDAIR 478 (498)
Q Consensus 444 ~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~a~~ 478 (498)
....-+.|.+-...| ...|-|+|.+++++|..||+
T Consensus 71 ~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ 113 (125)
T 1dyn_A 71 FMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 113 (125)
T ss_dssp SSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHH
T ss_pred CCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHH
Confidence 234556666653333 34899999999999999995
No 300
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.81 E-value=1.4 Score=38.99 Aligned_cols=99 Identities=12% Similarity=-0.036 Sum_probs=65.8
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010864 136 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 215 (498)
Q Consensus 136 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~ 215 (498)
..|+++.|.+..++. ++...|..||......|+ ++-|+.+|+++ ++.. .+-.+
T Consensus 17 ~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn--------------~~lAe~cy~~~-----~D~~---~L~~L 69 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL-----NDSITWERLIQEALAQGN--------------ASLAEMIYQTQ-----HSFD---KLSFL 69 (177)
T ss_dssp HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHT-----TCHH---HHHHH
T ss_pred hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCC--------------hHHHHHHHHHh-----CCHH---HHHHH
Confidence 468999999887654 778999999999999999 99999999987 3322 33334
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHH
Q 010864 216 ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 287 (498)
Q Consensus 216 ~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~A 287 (498)
|.. .|+.+.-. +.-+.+... -+ ++....++..+|++ +++++.|.+.
T Consensus 70 y~~----tg~~e~L~-------kla~iA~~~-g~----~n~af~~~l~lGdv----------~~~i~lL~~~ 115 (177)
T 3mkq_B 70 YLV----TGDVNKLS-------KMQNIAQTR-ED----FGSMLLNTFYNNST----------KERSSIFAEG 115 (177)
T ss_dssp HHH----HTCHHHHH-------HHHHHHHHT-TC----HHHHHHHHHHHTCH----------HHHHHHHHHT
T ss_pred HHH----hCCHHHHH-------HHHHHHHHC-cc----HHHHHHHHHHcCCH----------HHHHHHHHHC
Confidence 444 56554433 122222211 11 12223567778888 8888888654
No 301
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=91.55 E-value=0.13 Score=50.95 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=55.8
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 445 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (498)
...|||.-.. .....|+++||+|....|..+..... ......|+|..+. +..+.+.
T Consensus 214 ~k~G~L~K~g-----~~~k~WkkRwFVL~~~~L~Yyk~~~~----------------~~p~G~I~L~~~~-v~~~~~~-- 269 (347)
T 2r09_A 214 DREGWLLKLG-----GRVKTWKRRWFILTDNCLYYFEYTTD----------------KEPRGIIPLENLS-IREVEDP-- 269 (347)
T ss_dssp CEEEEEEEEC-----SSSCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEEECCS--
T ss_pred ccCCeeEecC-----CCcccceeEEEEEcCCEEEEEcCCCc----------------cCCcEEEEcCCeE-EEEccCC--
Confidence 3467776431 12457999999998766655432221 1123356666553 3333221
Q ss_pred CCCCeeeEeecC---------------------Cc-eeeeecChhhhhhHHHHHHHHH
Q 010864 446 PPGAGLCIETIH---------------------GP-VFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 446 p~~~~~~~~~~~---------------------~~-~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
...++|.|.|.. +. .||.|+|.++++.|++||+.+.
T Consensus 270 ~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 270 RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 244566665432 12 4789999999999999999764
No 302
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=91.32 E-value=0.097 Score=52.69 Aligned_cols=78 Identities=18% Similarity=0.300 Sum_probs=50.3
Q ss_pred hhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCC--cee
Q 010864 384 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHG--PVF 461 (498)
Q Consensus 384 ~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~ 461 (498)
..|.++||+|....+..... .. . .....|+|... ++.++.+ ..+.++|.|.|..| ..|
T Consensus 295 ~~WkkRwfvL~~~~L~y~k~-~~-------------~---~~~~~i~l~~~-~v~~~~~--~~r~~~F~i~t~~~~~~~~ 354 (385)
T 2q13_A 295 STWDRQFYFTQGGNLMSQAR-GD-------------V---AGGLAMDIDNC-SVMAVDC--EDRRYCFQITSFDGKKSSI 354 (385)
T ss_dssp -CCEEEEEEEETTEEEEECS-SC-------------S---SCEEEEECTTC-EEEEECC--TTCSSEEEEECTTSCBCCC
T ss_pred CCceeEEEEEECCEEEEecC-CC-------------c---CCCceEEccce-EEEeccc--cCCCceEEEEeCCCCeEEE
Confidence 36999999998776643222 10 0 11233444321 2233322 34668999998875 358
Q ss_pred eeecChhhhhhHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~ 481 (498)
|.|+|.++++.|+.||.-+.
T Consensus 355 l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 355 LQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHHH
Confidence 99999999999999998753
No 303
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=91.05 E-value=0.14 Score=42.20 Aligned_cols=94 Identities=14% Similarity=0.299 Sum_probs=57.6
Q ss_pred hccccCCCCCCCCCCch-hhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC----
Q 010864 368 AGYLTAPPAGIPVAPHS-DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD---- 442 (498)
Q Consensus 368 ~~~~~~~~~~~~~~~~~-~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 442 (498)
+|++..+..+. -.. .|+++||+|....+..+........ ......|+|..+.+|+++..
T Consensus 4 eGwl~~pk~~~---~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~-------------~~p~~~Idl~~~~~V~~V~~~d~i 67 (117)
T 2rov_A 4 EGWLSLPVRNN---TKKFGWVKKYVIVSSKKILFYDSEQDKEQ-------------SNPYMVLDIDKLFHVRPVTQTDVY 67 (117)
T ss_dssp EEEEECCCCSS---SSCCCCCEEEEEEETTEEEEESCHHHHHT-------------TCCSEEECGGGEEEEEECCTTTCS
T ss_pred EEEEEeecCCC---ccCCCcEEEEEEEECCEEEEEECCCCccc-------------CCceEEEECcccEEEEEccccccc
Confidence 57776542222 123 6999999998887776554332210 01234566666666554432
Q ss_pred ----CCCCCCCeeeEeec------CCceeeeecChhhhhhHHHHHHH
Q 010864 443 ----LTLPPGAGLCIETI------HGPVFLVADSWEALDGWLDAIRL 479 (498)
Q Consensus 443 ----~~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~a~~~ 479 (498)
-.+| ..|.|-+. ....||.|+|.++...|+.||+-
T Consensus 68 ~~~~~~~p--~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~ 112 (117)
T 2rov_A 68 RADAKEIP--RIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVK 112 (117)
T ss_dssp SSCTTTGG--GEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccccccCC--cEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 1233 45666542 23569999999999999999973
No 304
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=90.61 E-value=1.2 Score=34.90 Aligned_cols=51 Identities=14% Similarity=0.088 Sum_probs=42.2
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010864 182 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 251 (498)
Q Consensus 182 ~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~ 251 (498)
..+...++.|+....+|++.+ . .|++++|+.+|.+|+..|..++...|+..
T Consensus 6 ~~~~~~l~~Ai~lv~~Ave~D---------------~----~g~y~eAl~~Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 6 SGQDSDSTAAVAVLKRAVELD---------------A----ESRYQQALVCYQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp SCCCCHHHHHHHHHHHHHHHH---------------H----TTCHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred ccchHHHHHHHHHHHHHHHHH---------------H----hCCHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 344556889999988887653 3 89999999999999999999999887644
No 305
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.28 E-value=0.48 Score=36.40 Aligned_cols=46 Identities=26% Similarity=0.216 Sum_probs=38.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 186 ALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 186 ~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
...++|+....+|++. -. .|++++|+.+|.+|+..|.+++...|+.
T Consensus 14 ~~~~~Ai~lv~~Ave~---------------D~----~g~y~eAl~lY~~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 14 MLEEMARKYAINAVKA---------------DK----EGNAEEAITNYKKAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHHHHH---------------HH----TTCHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHHHH---------------HH----hccHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 4578888888888665 34 9999999999999999999999887654
No 306
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=89.78 E-value=0.34 Score=41.58 Aligned_cols=35 Identities=29% Similarity=0.256 Sum_probs=29.1
Q ss_pred CCCeeeEeecCC---ceeeeecChhhhhhHHHHHHHHH
Q 010864 447 PGAGLCIETIHG---PVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 447 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.-++|+|.+... +.+|-|+|-+++.+|+.||+=+.
T Consensus 110 ~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 110 RLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp CSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 457899987644 57999999999999999998663
No 307
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=89.78 E-value=1.8 Score=35.45 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH
Q 010864 187 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ 252 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~ 252 (498)
.+++|+....+|+.. -. .|+|++|+.+|.+|+.+|.++++..+.+..
T Consensus 14 ~l~kAi~lv~~Ave~---------------D~----ag~y~eAl~lY~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 14 NLQKAIDLASKAAQE---------------DK----AGNYEEALQLYQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHHH---------------HH----HTCHHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHHH---------------HH----ccCHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 578888888888743 23 899999999999999999999998866654
No 308
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=89.44 E-value=0.56 Score=35.99 Aligned_cols=45 Identities=20% Similarity=0.119 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 251 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~ 251 (498)
.++|+....+|++.+ . .|++.+|+.+|.+|+..|.+++...|+..
T Consensus 8 ~~~Ai~lv~~Ave~D---------------~----~g~y~eAl~lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKAD---------------K----EGKVEDAITYYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHH---------------H----TTCHHHHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHH---------------H----hccHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 677888888886653 4 99999999999999999999998876543
No 309
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=88.92 E-value=0.14 Score=51.51 Aligned_cols=95 Identities=15% Similarity=0.303 Sum_probs=55.2
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhcc--chhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVL--NHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (498)
...|||.--. .....|+++||+| ...-|..+...+. ..+...|+|.++..+......
T Consensus 147 ~keG~L~KrG-----~~~k~WkrRwFVL~~~~~~L~Yy~~~~~----------------~~p~g~I~L~~~~~~~~~~~~ 205 (386)
T 3lju_X 147 YREGFLWKRG-----RDNGQFLSRKFVLTEREGALKYFNRNDA----------------KEPKAVMKIEHLNATFQPAKI 205 (386)
T ss_dssp EEEEEEEEEC-----SSSCCEEEEEEEEETTTTEEEEEC---------------------CCSEEEEGGGEEEEECHHHH
T ss_pred ccccceeeec-----cccCCceEEEEEEEcCCCEEEEECCCCc----------------cCcccEEEeeccEEEEccccc
Confidence 3477776431 2245899999999 4445554433221 124556777776555422223
Q ss_pred CCCCCCeeeEe--ecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 444 TLPPGAGLCIE--TIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 444 ~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.-|-||.+... |..--.||.|+|.++++.|++||+.+.
T Consensus 206 ~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 206 GHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp TSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 33444444322 111124889999999999999999763
No 310
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=88.77 E-value=1.8 Score=33.56 Aligned_cols=44 Identities=25% Similarity=0.184 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALN 255 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~ 255 (498)
..+...+..+.. .|+|++|+++.++|..++..|+++- .+.+++.
T Consensus 16 H~~~RrAe~ll~----~gkydeAIech~kAa~yL~eAmklt-qs~qa~~ 59 (97)
T 2crb_A 16 HQQSRRADRLLA----AGKYEEAISCHRKATTYLSEAMKLT-ESEQAHL 59 (97)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHTTC-CCHHHHH
T ss_pred hHhhhHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 445566667777 9999999999999999999999987 6666655
No 311
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=88.12 E-value=0.35 Score=45.60 Aligned_cols=87 Identities=24% Similarity=0.400 Sum_probs=55.0
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccC---CCCCCCCeeeEeecCC-
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD---LTLPPGAGLCIETIHG- 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~- 458 (498)
...|.++||+|...++....+..+.. ++.-...+++++..-..+... ..-|-.++|+|....-
T Consensus 145 ~K~WkkRyfvLr~sgLy~~~k~~sk~-------------~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~ 211 (256)
T 3hk0_A 145 KKSWKKLYVCLRRSGLYCSTKGTSAA-------------PRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVR 211 (256)
T ss_dssp SSCEEEEEEEEETTEEEEESSTTCCC-------------GGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCS
T ss_pred CCcceEEEEEEeCCEEEEEecCCCCc-------------cccceEEEEcCCCEEEEecccccccCCCCCCEEEEEccccc
Confidence 46899999999988876544332210 011112346665444333322 3556677888762221
Q ss_pred -----ceeeeecChhhhhhHHHHHHHHHH
Q 010864 459 -----PVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 459 -----~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
-.||-|+|.+++..|..||+++.+
T Consensus 212 ~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 212 NETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp SCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 259999999999999999999753
No 312
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=87.98 E-value=0.5 Score=45.12 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=52.4
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCce-e
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 461 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~ 461 (498)
...|.++||+|....|.-+......... ........|+|..-. ++.+.|-+ -.-++|+|.|..|.. +
T Consensus 36 ~r~Wkk~w~VLkg~~L~fYKde~~~~~~----------~~~~p~~~I~L~ga~-v~~a~d~~-kKk~vF~L~t~~g~~yL 103 (279)
T 3a8n_A 36 RRKWKHYWVSLKGCTLFFYETDGRSGID----------HNSVPKHAVWVENSI-VQAVPEHP-KKDFVFCLSNSLGDAFL 103 (279)
T ss_dssp CCCCEEEEEEEETTEECCBCCC------------------CCCSSCCBCCSCE-ECCCTTSS-SSCSCCCEEETTTEEEE
T ss_pred CCCCeEEEEEEeCCEEEEEecccccccc----------cccCCCceEeccCcE-EEeccccC-CCCcEEEEEcCCCCEEE
Confidence 4689999999987666554432221100 000112234443222 12121211 134789998888876 5
Q ss_pred eeecChhhhhhHHHHHHHHHHHH
Q 010864 462 LVADSWEALDGWLDAIRLVYTIY 484 (498)
Q Consensus 462 ~~~~~~~~~~~~~~a~~~~~~~~ 484 (498)
|-|+|.+++..|+.||..+...+
T Consensus 104 FQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 104 FQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHHHhhh
Confidence 56889999999999999887643
No 313
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=87.98 E-value=0.2 Score=41.91 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=53.4
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeec-CCce-
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETI-HGPV- 460 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~- 460 (498)
...|.++|++|...-|-.+.....+. .........+.-.|+|+.. .|+.+.+.+ .-++|.|.+. .|-+
T Consensus 21 ~ksWkr~W~vL~g~~L~yf~~~~~~~-------~~~~~~~~~P~~~i~L~g~-~V~~~e~~~--~~~~F~L~~~~~G~~Y 90 (126)
T 2dtc_A 21 LSSWTRYWVVLSGATLLYYGAKSLRG-------TDRKHYKSTPGKKVSIVGW-MVQLPDDPE--HPDIFQLNNPDKGNVY 90 (126)
T ss_dssp SCCCEEEEEEEETTEEEEEEBSSSCC-------SSGGGBCSSCSEEEECTTC-EEECCCCTT--STTEEEEECTTSCSEE
T ss_pred ccCcccEEEEEeCCEEEEEccccccc-------ccccccccCCCceEEeCCC-EEEecCCCC--CCCEEEEeeCCCCCEE
Confidence 45899999999887766544221110 0000001123346666533 334444433 5677888766 5666
Q ss_pred eeeecChhhhhhHHHHHHHHH
Q 010864 461 FLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 461 ~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.|-|+|.++++.|+.||+-+-
T Consensus 91 ~fqA~s~~~~~~W~~ai~~a~ 111 (126)
T 2dtc_A 91 KFQTGSRFHAILWHKHLDDAC 111 (126)
T ss_dssp EEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHH
Confidence 566789999999999998754
No 314
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=87.84 E-value=7.2 Score=39.05 Aligned_cols=97 Identities=14% Similarity=0.018 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHH
Q 010864 209 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRA 286 (498)
Q Consensus 209 ~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~ 286 (498)
-..||..|.+ .|+|.+|.+.+.+.+..+.+ +|.. -.+.+..-..+|..++++ .++...|.+
T Consensus 102 ~~kL~~l~~~----~~~y~~a~~~i~~l~~~~~~---~dd~~~llev~lle~~~~~~~~n~----------~k~k~~l~~ 164 (394)
T 3txn_A 102 EARLIALYFD----TALYTEALALGAQLLRELKK---LDDKNLLVEVQLLESKTYHALSNL----------PKARAALTS 164 (394)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHHTT---SSCTHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHH
T ss_pred HHHHHHHHHH----hhhHHHHHHHHHHHHHHHhc---cccchhHHHHHHHHHHHHHHhccH----------HHHHHHHHH
Confidence 3488999999 99999999777666665543 2221 234555666667777777 999999999
Q ss_pred HHHhc---CCCHH----HHHHHHHHHH-HcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHH
Q 010864 287 AIQLQ---FDFHR----AIYNLGTVLY-GLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAH 341 (498)
Q Consensus 287 Al~l~---P~~~~----a~~~Lg~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 341 (498)
|.... +.++. ....-|..+. ..++ |..|..+|-.++
T Consensus 165 a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rd-------------------yk~A~~~F~eaf 208 (394)
T 3txn_A 165 ARTTANAIYCPPKVQGALDLQSGILHAADERD-------------------FKTAFSYFYEAF 208 (394)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSC-------------------HHHHHHHHHHHH
T ss_pred HHhhhccCCCCHHHHHHHHHHhhHHHHHhccC-------------------HHHHHHHHHHHH
Confidence 98763 23333 3333466666 5666 888888887776
No 315
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=87.43 E-value=7.4 Score=34.09 Aligned_cols=119 Identities=13% Similarity=0.004 Sum_probs=84.1
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 216 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~ 216 (498)
-.+|+.++-.-.- +-|..++--..++.+++-.|. |.+++-.+. +-+...+.+.-..||
T Consensus 15 Y~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngE--------------Y~R~Lf~L~-----~lNT~Ts~YYk~LCy 72 (242)
T 3kae_A 15 YRDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGE--------------YTRALFHLH-----KLNTCTSKYYESLCY 72 (242)
T ss_dssp TTCHHHHHHHHHH---HC----CTHHHHHHHHHHTTC--------------HHHHHHHHH-----TCCBHHHHHHHHHHH
T ss_pred cccccHHHHHHHH---HccCChHHHhhhhhhhhhcch--------------HhHHHHHHH-----hcchHHHHHHHHHHH
Confidence 3556665543322 234444556778889999999 888876553 345667777788899
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHH--h---------------cCCCCHH-HHHHHHHHHHHhcCcchHHhhhhhHH
Q 010864 217 SDRAKMRGRTKEAEELWKQATKNYEKAV--Q---------------LNWNSPQ-ALNNWGLALQELSAIVPAREKQTIVR 278 (498)
Q Consensus 217 ~~~~~~~g~~~eA~~~~~~Al~~~~~Al--~---------------l~P~~~~-a~~~lg~~l~~~g~~~~a~~~~~~~~ 278 (498)
.. +.++..|+ ...++.+ . +||.+.+ .++.+|.++.+.|.. +
T Consensus 73 ~k----lKdYkkA~-------~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r----------~ 131 (242)
T 3kae_A 73 KK----KKDYKKAI-------KSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYR----------E 131 (242)
T ss_dssp HH----TTCHHHHH-------HHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCH----------H
T ss_pred HH----HHHHHHHH-------HHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCH----------H
Confidence 88 99999999 5777776 2 2344444 467789999999999 9
Q ss_pred HHHHHHHHHHHhcCCCHHHH
Q 010864 279 TAISKFRAAIQLQFDFHRAI 298 (498)
Q Consensus 279 ~Ai~~~~~Al~l~P~~~~a~ 298 (498)
+||.+|.......|-++.+-
T Consensus 132 EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 132 EGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHHHHHHHHCCCHHHHH
T ss_pred HhhhHhhhhcCCccccchHH
Confidence 99999999999988866544
No 316
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=87.19 E-value=0.4 Score=45.86 Aligned_cols=87 Identities=17% Similarity=0.322 Sum_probs=51.3
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCc--cccccccc-CCCCCCCCeeeEeec---
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPD--IVSVSACA-DLTLPPGAGLCIETI--- 456 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~p~~~~~~~~~~--- 456 (498)
...|.++||+|...++....+..+.. +..-...+++++ |-.+.... ...-|-.++|+|...
T Consensus 171 ~k~WkkRyfvLr~sgLyy~~K~~sk~-------------~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~ 237 (281)
T 4gmv_A 171 KKSWKKRYFLLRASGIYYVPKGKAKV-------------SRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQ 237 (281)
T ss_dssp SSCEEEEEEEECSSCEEEC----------------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCC
T ss_pred CCCCeEEEEEEeCCEEEEEeCCCCCc-------------cccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccC
Confidence 35899999999888876544432211 011122234443 22221111 134477888888732
Q ss_pred ---CCceeeeecChhhhhhHHHHHHHHHH
Q 010864 457 ---HGPVFLVADSWEALDGWLDAIRLVYT 482 (498)
Q Consensus 457 ---~~~~~~~~~~~~~~~~~~~a~~~~~~ 482 (498)
..-.||-|+|..+++.|..||+++-+
T Consensus 238 ~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 238 KKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp SCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 22359999999999999999999743
No 317
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=87.08 E-value=10 Score=36.66 Aligned_cols=126 Identities=12% Similarity=0.038 Sum_probs=67.8
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHH
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEAC 192 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~ 192 (498)
.|++=+|.+.+..+... +.++++|++|++.+... +..+.+.|+ +..|.
T Consensus 26 ~G~yYEAhQ~~Rtl~~R----y~~~~~~~eAidlL~~g--------------a~~ll~~~Q--------------~~sa~ 73 (312)
T 2wpv_A 26 AGDYYEAHQTLRTIANR----YVRSKSYEHAIELISQG--------------ALSFLKAKQ--------------GGSGT 73 (312)
T ss_dssp HTCHHHHHHHHHHHHHH----HHHTTCHHHHHHHHHHH--------------HHHHHHTTC--------------HHHHH
T ss_pred ccChHHHHHHHHHHHHH----HHHhcCHHHHHHHHHHH--------------HHHHHHCCC--------------cchHH
Confidence 46677888888887777 77888999998875543 233333344 33333
Q ss_pred HHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Q 010864 193 KKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAE-ELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 266 (498)
Q Consensus 193 ~~~~~Al~l-----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~-~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 266 (498)
+...-.++. .+-+.....++..++.. ...-+... +...+|++.-.+.-...-.++..+..+|..|++.|+
T Consensus 74 DLa~llvev~~~~~~~~~~~~~~rl~~l~~~----~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~ 149 (312)
T 2wpv_A 74 DLIFYLLEVYDLAEVKVDDISVARLVRLIAE----LDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDF 149 (312)
T ss_dssp HHHHHHHHHHHHTTCCCSHHHHHHHHHHHTT----CCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH----CCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCC
Confidence 322222111 12233333444444332 22211111 112223333332222223589999999999999999
Q ss_pred cchHHhhhhhHHHHHHHH
Q 010864 267 IVPAREKQTIVRTAISKF 284 (498)
Q Consensus 267 ~~~a~~~~~~~~~Ai~~~ 284 (498)
+ .+|..+|
T Consensus 150 ~----------~~A~~H~ 157 (312)
T 2wpv_A 150 V----------YEAERYF 157 (312)
T ss_dssp H----------HHHHHHH
T ss_pred H----------HHHHHHH
Confidence 9 6666655
No 318
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=85.25 E-value=5.3 Score=40.00 Aligned_cols=124 Identities=13% Similarity=-0.020 Sum_probs=83.0
Q ss_pred ccHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC------C
Q 010864 138 RILTFAAKRYANAIERNPEDYD------ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT------L 205 (498)
Q Consensus 138 g~~~~A~~~~~~al~~~P~~~~------a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~------~ 205 (498)
+..+.-++.+..+++..-+.-. .-..+|..|+..|+ |.+|.+.+.+.++-... .
T Consensus 73 ~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~--------------y~~a~~~i~~l~~~~~~~dd~~~l 138 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTAL--------------YTEALALGAQLLRELKKLDDKNLL 138 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHTTSSCTHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHHHhccccchhH
Confidence 3344455666666543322211 23389999999999 99999999999886322 2
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHH-HhcCcchHHhhhhhHHHHHHH
Q 010864 206 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-SPQALNNWGLALQ-ELSAIVPAREKQTIVRTAISK 283 (498)
Q Consensus 206 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~-~~~a~~~lg~~l~-~~g~~~~a~~~~~~~~~Ai~~ 283 (498)
.+.+..-..+|.. ++++..+...|.+|...-. ++-.+|. .+.....-|..+. ..++| ++|-.+
T Consensus 139 lev~lle~~~~~~----~~n~~k~k~~l~~a~~~~~-ai~~~p~i~a~i~~~~Gi~~l~~~rdy----------k~A~~~ 203 (394)
T 3txn_A 139 VEVQLLESKTYHA----LSNLPKARAALTSARTTAN-AIYCPPKVQGALDLQSGILHAADERDF----------KTAFSY 203 (394)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHTTSCH----------HHHHHH
T ss_pred HHHHHHHHHHHHH----hccHHHHHHHHHHHHhhhc-cCCCCHHHHHHHHHHhhHHHHHhccCH----------HHHHHH
Confidence 3556666777777 9999999977776665543 2222332 3445566677777 78888 999999
Q ss_pred HHHHHHh
Q 010864 284 FRAAIQL 290 (498)
Q Consensus 284 ~~~Al~l 290 (498)
|-++++-
T Consensus 204 F~eaf~~ 210 (394)
T 3txn_A 204 FYEAFEG 210 (394)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9888754
No 319
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.26 E-value=0.69 Score=38.93 Aligned_cols=85 Identities=14% Similarity=0.284 Sum_probs=51.2
Q ss_pred chhhhhhhhccchhhhhhh-cccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCC-CCCCeeeEeecC--C
Q 010864 383 HSDWKRSQFVLNHEGLQQA-SKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL-PPGAGLCIETIH--G 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~--~ 458 (498)
...|+++||++....|..+ ++.+.. +.+...|+|+... |.| |.++ +-.|+|.+-+.. |
T Consensus 25 lK~~KrrWFvlk~~~L~YyK~kee~~---------------~ePig~I~L~gce-V~p--d~~~~~~kf~ikl~iPs~~g 86 (137)
T 2ys3_A 25 LKGYRQHWVVFKETTLSYYKSQDEAP---------------GDPIQQLNLKGCE-VVP--DVNVSGQKFCIKLLVPSPEG 86 (137)
T ss_dssp SSSSCCCEEEECSSCEEEESSTTTTT---------------SCCSCCBCTTTCE-EEE--CCBGGGTBEEEEEEEECSSS
T ss_pred cccceeEEEEEeCCEEEEECCchhcc---------------CCCceEEECCCCE-Eec--cccccCCceEEEEEccCCCC
Confidence 3479999999987776665 333321 1223344444322 222 2222 245566555321 1
Q ss_pred --ceeeeecChhhhhhHHHHHHHHHHHHhhccc
Q 010864 459 --PVFLVADSWEALDGWLDAIRLVYTIYARGKA 489 (498)
Q Consensus 459 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 489 (498)
-+||.+||.+..+.|..|++++ .+||.
T Consensus 87 ~r~y~l~cdsEeqy~~WMaA~rlA----skgkt 115 (137)
T 2ys3_A 87 MSEIYLRCQDEQQYARWMAGCRLA----SKGRT 115 (137)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHH----HTSCC
T ss_pred ceEEEEECCCHHHHHHHHHHHHHh----ccCcc
Confidence 2699999999999999999965 46753
No 320
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=84.07 E-value=28 Score=33.87 Aligned_cols=119 Identities=12% Similarity=-0.089 Sum_probs=61.5
Q ss_pred hhcH---HHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHH
Q 010864 113 AEQN---NAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLE 189 (498)
Q Consensus 113 ~~~~---~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~ 189 (498)
.|++ =+|.+.+..+... +.++++|++|++++... +..+.+.|+ +.
T Consensus 25 ~G~y~~~YEAHQ~~RTi~~R----y~~~k~y~eAidLL~~G--------------A~~ll~~~Q--------------~~ 72 (336)
T 3lpz_A 25 EGQPEEQYEAAQETRLVAAR----YSKQGNWAAAVDILASV--------------SQTLLRSGQ--------------GG 72 (336)
T ss_dssp HCCHHHHHHHHHHHHHHHHH----HHHTTCHHHHHHHHHHH--------------HHHHHHTTC--------------HH
T ss_pred CCCCccccHHHHHHHHHHHH----HHhhcCHHHHHHHHHHH--------------HHHHHHCCC--------------cc
Confidence 3666 6777777777766 77888999888765443 233333333 33
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 190 EACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEE-LWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 190 ~A~~~~~~Al~l-----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~-~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
-|.+...-.++. -+-+.....++..++.. ...-+-... ..++|+++-.+.=...-.++..+..+|..|++
T Consensus 73 sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~----~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~ 148 (336)
T 3lpz_A 73 SGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRL----FQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVE 148 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTT----SCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----CCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHc
Confidence 332222111111 11122333334443333 322111111 22333344433112234589999999999999
Q ss_pred hcCc
Q 010864 264 LSAI 267 (498)
Q Consensus 264 ~g~~ 267 (498)
.+++
T Consensus 149 e~~~ 152 (336)
T 3lpz_A 149 EGEF 152 (336)
T ss_dssp TTCH
T ss_pred cCCH
Confidence 9999
No 321
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.88 E-value=2.3 Score=43.20 Aligned_cols=105 Identities=11% Similarity=-0.007 Sum_probs=74.4
Q ss_pred CCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 155 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT---LHDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 155 P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~---~~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
..-..++..+|..|...|+ +++|.++|.++...... ..+.+.++-.++.. .+++..+..
T Consensus 128 ~e~~~~~~~la~~~~~~Gd--------------~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~----~~d~~~~~~ 189 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGD--------------KDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF----YNDQLYVKE 189 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCC--------------CTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH----HTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----hccHHHHHH
Confidence 3345688999999999999 99999999999887443 35677777777777 999999996
Q ss_pred HHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhc
Q 010864 232 LWKQATKNYEKAVQLNWNS---PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 291 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~~---~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~ 291 (498)
.+.+|..... ..++. .......|.++...++| .+|-.+|-.++...
T Consensus 190 ~~~ka~~~~~----~~~d~~~~~~lk~~~gl~~l~~r~f----------~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 190 KLEAVNSMIE----KGGDWERRNRYKTYYGIHCLAVRNF----------KEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHHHHT----TCCCTHHHHHHHHHHHHGGGGTSCH----------HHHHHHHHHHHHHS
T ss_pred HHHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhChH----------HHHHHHHHHHhccC
Confidence 5555433222 12221 12334455666666777 99999998887653
No 322
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.97 E-value=3.4 Score=33.55 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=25.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010864 223 RGRTKEAEELWKQATKNYEKAVQLNWN 249 (498)
Q Consensus 223 ~g~~~eA~~~~~~Al~~~~~Al~l~P~ 249 (498)
.|+-++|+++|++.+..++++|.+..+
T Consensus 35 ~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 35 LGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 799999999999999999999988764
No 323
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=82.86 E-value=5.4 Score=30.43 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 187 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
.+++|+....+|+.. -. .|++++|+.+|.+|+..|..++...++.
T Consensus 9 ~l~~A~~l~~~Av~~---------------D~----~g~y~eAl~~Y~~aie~l~~a~k~e~~~ 53 (85)
T 2v6x_A 9 FLTKGIELVQKAIDL---------------DT----ATQYEEAYTAYYNGLDYLMLALKYEKNP 53 (85)
T ss_dssp HHHHHHHHHHHHHHH---------------HH----TTCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHHH---------------HH----cCCHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 377888888888643 34 8999999999999999999999888654
No 324
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=81.87 E-value=29 Score=39.16 Aligned_cols=98 Identities=10% Similarity=-0.118 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
...|+.+-..|.+.|+ .++|...|.+.-+. ..-+...|+-|-..|.+ .|++++|.
T Consensus 127 ~~TynaLIdglcK~G~--------------leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck----~G~~~eA~--- 185 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQ--------------LPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR----QGAFKELV--- 185 (1134)
T ss_dssp HHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH----HTCHHHHH---
T ss_pred HHHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh----CCCHHHHH---
Confidence 3467888889999999 99999999775432 23366889999999999 99999999
Q ss_pred HHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 234 KQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 234 ~~Al~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
..|++..+ +.| +..+|+.+-.++.+.|+. .++|...|++..+.
T Consensus 186 ----~Lf~eM~~~G~~P-DvvTYntLI~glcK~G~~---------~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 186 ----YVLFMVKDAGLTP-DLLSYAAALQCMGRQDQD---------AGTIERCLEQMSQE 230 (1134)
T ss_dssp ----HHHHHHHHTTCCC-CHHHHHHHHHHHHHHTCC---------HHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCC-cHHHHHHHHHHHHhCCCc---------HHHHHHHHHHHHHc
Confidence 46666654 345 788888888899999984 15777888888775
No 325
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=81.84 E-value=21 Score=33.61 Aligned_cols=61 Identities=11% Similarity=0.046 Sum_probs=55.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHH
Q 010864 223 RGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYN 300 (498)
Q Consensus 223 ~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~ 300 (498)
.|.+++|+ ......++.+|.++.....|-.+|+-.|++ +.|..-++-+.+++|+.......
T Consensus 10 ~g~L~~al-------~~~~~~VR~~P~da~~R~~LfqLLcv~G~w----------~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 10 EGQLQQAL-------ELLIEAIKASPKDASLRSSFIELLCIDGDF----------ERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp TTCHHHHH-------HHHHHHHHTCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCGGGHHHHHH
T ss_pred CCCHHHHH-------HHHHHHHHhCCcCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHhCchhhHHHHH
Confidence 78888888 689999999999999999999999999999 99999999999999998665433
No 326
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=79.90 E-value=31 Score=30.26 Aligned_cols=76 Identities=13% Similarity=0.016 Sum_probs=58.3
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH--h-----------
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR--L----------- 201 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~--l----------- 201 (498)
+-.|+|..++-.+. +-+...+.+....+|..+++ |..|+.+++..++ +
T Consensus 44 yyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKd--------------YkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 44 YLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKD--------------YKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp HHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred hhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHhcccccCcccccccc
Confidence 44677777765543 34667888899999999999 9999999999993 2
Q ss_pred ----CCCCHHH-HHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 202 ----CPTLHDA-FYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 202 ----~p~~~~a-~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
+|.+-+. +..+|.++.. .|..+||+..|
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq----~g~r~EaI~y~ 137 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTL----SGYREEGIGHY 137 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHH----TTCHHHHHHHH
T ss_pred eeeeccchHHHHHHHHHHHHHH----hcCHHHhhhHh
Confidence 4556664 4566888888 99999999644
No 327
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=79.68 E-value=1.3 Score=38.00 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=52.8
Q ss_pred hhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCCCeeeEeecCCceeeee
Q 010864 385 DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVA 464 (498)
Q Consensus 385 ~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 464 (498)
-|+++||+|.....-.+..+.. .....-||+..-.+++..- ...|+|.|-. -+|-+.
T Consensus 65 ~~kkR~liLT~~PrL~Yvdp~~----------------~~~KGeIpls~~l~ve~k~------~~~F~I~Tp~-RtY~~~ 121 (151)
T 1w1g_A 65 FARRRQLLLTEGPHLYYVDPVN----------------KVLKGEIPWSQELRPEAKN------FKTFFVHTPN-RTYYLM 121 (151)
T ss_dssp EEEEEEEEEETTTEEEEEETTT----------------TEEEEEECCCTTCEEEESS------SSEEEEEETT-EEEEEE
T ss_pred cceeEEEEEcCCceEEEEcCcc----------------ccccceEecCCCeeEEEcC------CCEEEEECCC-ceEEEE
Confidence 3889999998755444333222 2345567777544444322 3389998644 788888
Q ss_pred cChhhhhhHHHHHHHHHHHHh
Q 010864 465 DSWEALDGWLDAIRLVYTIYA 485 (498)
Q Consensus 465 ~~~~~~~~~~~a~~~~~~~~~ 485 (498)
|+-..+..||+||.-+...+-
T Consensus 122 d~~~~AqeWv~aI~~~~~~~~ 142 (151)
T 1w1g_A 122 DPSGNAHKWCRKIQEVWRQRY 142 (151)
T ss_dssp CTTSCHHHHHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHHHHHh
Confidence 888899999999998776543
No 328
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=78.35 E-value=23 Score=39.90 Aligned_cols=92 Identities=8% Similarity=-0.104 Sum_probs=70.6
Q ss_pred HHHHhhhcchhhHHhhccHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHH
Q 010864 122 LINSVTGVDEEGRSRQRILTFAAKRYANAIER----NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDE 197 (498)
Q Consensus 122 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~ 197 (498)
.|+.++.. +.+.|++++|...|.+.-+. -.-+...|+.+-..|.+.|+ +++|.+.|++
T Consensus 129 TynaLIdg----lcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~--------------~~eA~~Lf~e 190 (1134)
T 3spa_A 129 RLLAFFKC----CLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGA--------------FKELVYVLFM 190 (1134)
T ss_dssp HHHHHHHH----HHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTC--------------HHHHHHHHHH
T ss_pred HHHHHHHH----HHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCC--------------HHHHHHHHHH
Confidence 44555444 88899999999999775432 23467899999999999999 9999999999
Q ss_pred HHHhCC-CCHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHH
Q 010864 198 ATRLCP-TLHDAFYNWAIAISDRAKMRGRT-KEAEELWKQ 235 (498)
Q Consensus 198 Al~l~p-~~~~a~~~lg~~~~~~~~~~g~~-~eA~~~~~~ 235 (498)
..+..- -+...|+.+=.++.+ .|+. ++|.+++++
T Consensus 191 M~~~G~~PDvvTYntLI~glcK----~G~~~e~A~~Ll~E 226 (1134)
T 3spa_A 191 VKDAGLTPDLLSYAAALQCMGR----QDQDAGTIERCLEQ 226 (1134)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHH----HTCCHHHHHHHHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHh----CCCcHHHHHHHHHH
Confidence 987632 266778887778888 8885 677766543
No 329
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.63 E-value=2.5 Score=43.84 Aligned_cols=123 Identities=11% Similarity=-0.103 Sum_probs=54.1
Q ss_pred HhhccHHHHHHHHHHHH-----------HhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHH----------HH
Q 010864 135 SRQRILTFAAKRYANAI-----------ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEA----------CK 193 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al-----------~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A----------~~ 193 (498)
...+++++|..+-...+ .+|+-.+.+|+.++.++...|+ +... ..
T Consensus 147 ~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~--------------~~~~~~~~~~~~~ir~ 212 (523)
T 4b4t_S 147 WDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLAR--------------SSEEINSDNQNIILRS 212 (523)
T ss_dssp ----------------------------------------------------------------------CHHHHHHHHT
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcc--------------cccccccccchhhHHH
Confidence 45678888887766554 1234456677777777777776 3332 12
Q ss_pred HHHHHHHh-----CCC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHH
Q 010864 194 KYDEATRL-----CPT-LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-------SPQALNNWGLA 260 (498)
Q Consensus 194 ~~~~Al~l-----~p~-~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~-------~~~a~~~lg~~ 260 (498)
.+-.+++- +.. .+..++.+=..|.. .+.++.|. +...++. .|. ....++.+|.+
T Consensus 213 ~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~----~~~y~qA~-------~lvsk~~--fP~~~~sn~q~~rY~YY~GRI 279 (523)
T 4b4t_S 213 TMMKFLKIASLKHDNETKAMLINLILRDFLN----NGEVDSAS-------DFISKLE--YPHTDVSSSLEARYFFYLSKI 279 (523)
T ss_dssp HHHHHHHHCCSCSSSCHHHHHHHHHHHHHHH----SSCSTTHH-------HHHHHHC--SCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcchhHHHHHHHHHHHHc----cCcHHHHH-------HHHhcCc--CCcccCCHHHHHHHHHHHHHH
Confidence 22233322 332 24456666666766 89999998 5666664 332 14567888999
Q ss_pred HHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCC
Q 010864 261 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF 294 (498)
Q Consensus 261 l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~ 294 (498)
+.-+++| .+|..++..|++..|.+
T Consensus 280 ~a~q~~Y----------~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 280 NAIQLDY----------STANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHTTCH----------HHHHHHHHHHTSSCSCS
T ss_pred HHHhccH----------HHHHHHHHHHHHhCCcc
Confidence 9999999 99999999999987754
No 330
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.35 E-value=17 Score=27.81 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 251 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~ 251 (498)
-..|+....+|++. -. .|++++|+.+|.+|+..|..++...|+..
T Consensus 13 ~~~A~~lv~~Ave~---------------D~----~g~y~eAl~lY~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 13 STAAATVLKRAVEL---------------DS----ESRYPQALVCYQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHHHHHHH---------------HH----TTCHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHH---------------HH----cCCHHHHHHHHHHHHHHHHHHHhhCCCHH
Confidence 45566666666554 34 89999999999999999999999887653
No 331
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.85 E-value=21 Score=36.19 Aligned_cols=101 Identities=11% Similarity=-0.047 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC--CC----CHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC--PT----LHDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~--p~----~~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
+.....|+.+|...|+ +.+|...+.....-. .. -.+.+.....+|.. .+++..|..
T Consensus 137 arl~~~La~i~e~~g~--------------~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~----~~d~~~a~~ 198 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGK--------------IDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL----KGDYSQATV 198 (445)
T ss_dssp HHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH----HTCHHHHHH
T ss_pred HHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH----CCCHHHHHH
Confidence 3456788999999999 999999998876431 11 23566666777777 999999995
Q ss_pred HHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 232 LWKQATKNYEKAVQLNWNS----PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 232 ~~~~Al~~~~~Al~l~P~~----~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
.+.++... ++. .+.. ...+...|.++...++| .+|-.+|..+++.
T Consensus 199 ~~~ki~~~---~~~-~~~~~~lk~~~~~~~~~~~~~e~~y----------~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 199 LSRKILKK---TFK-NPKYESLKLEYYNLLVKISLHKREY----------LEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHH---HHH-SSCCHHHHHHHHHHHHHHHHHHCCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHh---hcc-cCCcHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHHHHHhc
Confidence 44443221 122 2222 34567778888888888 9999999999875
No 332
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.01 E-value=9.2 Score=38.64 Aligned_cols=86 Identities=13% Similarity=-0.019 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Q 010864 187 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 266 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 266 (498)
.+++.+..+.+-..-......++..+|..|.+ .|++++|.+.|.+...... -...-...+.++-.++...++
T Consensus 112 ~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~----~Gd~~~A~~~~~~~~~~~~----~~~~kid~~l~~irl~l~~~d 183 (429)
T 4b4t_R 112 ELNEKIQKLEEDDEGELEQAQAWINLGEYYAQ----IGDKDNAEKTLGKSLSKAI----STGAKIDVMLTIARLGFFYND 183 (429)
T ss_dssp HHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHH----HCCCTTHHHHHHHHHHHHT----CCCSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHhcc
Confidence 34444444433222233455688999999999 9999999965544332221 112346788888888999999
Q ss_pred cchHHhhhhhHHHHHHHHHHHHHh
Q 010864 267 IVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 267 ~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
+ ..+..+++++-.+
T Consensus 184 ~----------~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 184 Q----------LYVKEKLEAVNSM 197 (429)
T ss_dssp H----------HHHHHHHHHHHHH
T ss_pred H----------HHHHHHHHHHHHh
Confidence 9 9999999998776
No 333
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=70.58 E-value=2 Score=37.24 Aligned_cols=85 Identities=15% Similarity=0.275 Sum_probs=51.5
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCCCC-CeeeEeecCCc--
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPG-AGLCIETIHGP-- 459 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~-- 459 (498)
-..|+++||++....+..+-..+... +.+...|+|. .-+..-|+++..+ |+|++. ++.+
T Consensus 63 LKgyKryWFv~kd~~LsyYKskEe~~--------------geP~~~I~Lr---GCEVtpDVnva~~Kf~IkL~-vP~~~g 124 (173)
T 4f7h_A 63 LKGYKQYWCTFKDTSISCYKSKEESS--------------GTPAHQMNLR---GCEVTPDVNISGQKFNIKLL-IPVAEG 124 (173)
T ss_dssp CCCCEEEEEEEETTEEEEESCGGGCS--------------SCCSEEEECT---TCEEEEEEETTTTEEEEEEE-EEETTE
T ss_pred cccceeEEEEEeCCEEEEEcCHhHhc--------------CCCceEEecC---ceEEeccccccccceeEEEe-ccCCCC
Confidence 45799999999877776654333311 1122233332 1111123445533 555554 3322
Q ss_pred ---eeeeecChhhhhhHHHHHHHHHHHHhhccc
Q 010864 460 ---VFLVADSWEALDGWLDAIRLVYTIYARGKA 489 (498)
Q Consensus 460 ---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 489 (498)
+||.+++....+.|.-|.+| +.|||.
T Consensus 125 m~e~~Lrcd~E~qya~WMAAcrL----AskGkt 153 (173)
T 4f7h_A 125 MNEIWLRCDNEKQYAHWMAACRL----ASKGKT 153 (173)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHH----HHTTCC
T ss_pred cceeeeecCCHHHHHHHHHHhhh----hccCCc
Confidence 79999999999999999987 568874
No 334
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=68.27 E-value=4.7 Score=33.53 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=43.2
Q ss_pred ccccccCCcccccccccCC--------CCCCCCeeeEeecC--CceeeeecChhhhhhHHHHHHHHH
Q 010864 425 RAIRIEVPDIVSVSACADL--------TLPPGAGLCIETIH--GPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
..-.|++.+|..++..... ..|+...|.|=-.. ...+|+|.|.++.+-|++.|+.+.
T Consensus 54 ~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~ 120 (131)
T 1mai_A 54 ESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKII 120 (131)
T ss_dssp TTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 5678999999999987732 34566666664333 257999999999999999998654
No 335
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.65 E-value=46 Score=38.06 Aligned_cols=99 Identities=12% Similarity=-0.069 Sum_probs=69.6
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH-------------HHHHHHHhc---CCCCHHHHHHHHHHH
Q 010864 198 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT-------------KNYEKAVQL---NWNSPQALNNWGLAL 261 (498)
Q Consensus 198 Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al-------------~~~~~Al~l---~P~~~~a~~~lg~~l 261 (498)
.+...|.++...|-+|.++.. .|++++|.++|++|- ......... ....+..|+.+..++
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~----~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LF 909 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKL 909 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHH
T ss_pred HhhhccCCcHHHHHHHHHHHh----cCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHH
Confidence 445678888888999999999 999999997775532 111111221 122345677777788
Q ss_pred HHhcCcchHHhhhhhHHHHHHHHHHHHHhcC-CCHH----HHHHHHHHHHHcch
Q 010864 262 QELSAIVPAREKQTIVRTAISKFRAAIQLQF-DFHR----AIYNLGTVLYGLAE 310 (498)
Q Consensus 262 ~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P-~~~~----a~~~Lg~~~~~~g~ 310 (498)
.+.|.+ +.++++-+.||+..+ ++.. .|.++=..+..+|+
T Consensus 910 e~~~~~----------~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ 953 (1139)
T 4fhn_B 910 FEESAY----------IDALEFSLLADASKETDDEDLSIAITHETLKTACAAGK 953 (1139)
T ss_dssp HHTSCC----------HHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHcCCH----------HHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCC
Confidence 888888 999999999998754 4432 56666666777775
No 336
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=66.58 E-value=2.5 Score=36.30 Aligned_cols=85 Identities=20% Similarity=0.343 Sum_probs=50.7
Q ss_pred chhhhhhhhccchhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCCCCC-CCCeeeEeecC---C
Q 010864 383 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIETIH---G 458 (498)
Q Consensus 383 ~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~---~ 458 (498)
-..|+++||++....+..+-..+... +.....|+|.. -|..-|+++. --++|++- ++ |
T Consensus 42 LKgfKryWfv~kDt~LsyYKSkEe~~--------------geP~~~inLrG---CEVtPDVnva~~Kf~ikL~-ip~~~g 103 (165)
T 4bbk_A 42 LKACKQYWFVFKDTSIAYFKNKELEQ--------------GEPIEKLNLRG---CEIVPDVNVSGRKFGIKLL-IPVADG 103 (165)
T ss_dssp --CCEEEEEEEETTEEEEESSGGGTT--------------SCCSEEEECTT---CEEEEEEETTTTEEEEEEE-EEETTE
T ss_pred cccceeEEEEEeCCEEEEEcCHHHhc--------------CCCceEEecCc---cEEecccccccceeeEEEe-cCCCCc
Confidence 45799999999887776654333311 12233444432 1222234454 33445553 22 2
Q ss_pred --ceeeeecChhhhhhHHHHHHHHHHHHhhccc
Q 010864 459 --PVFLVADSWEALDGWLDAIRLVYTIYARGKA 489 (498)
Q Consensus 459 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 489 (498)
-+||.+|+......|.-|.+|+ .+||.
T Consensus 104 m~e~~LrcdsE~QYa~WMAAcrLA----skGkT 132 (165)
T 4bbk_A 104 MNEVYLRCDHEDQYARWMAACILA----SKGKT 132 (165)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHH----HTTCC
T ss_pred ceeeeeecCCHHHHHHHHHHhhhc----ccccc
Confidence 2699999999999999999975 56763
No 337
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.73 E-value=24 Score=40.37 Aligned_cols=97 Identities=12% Similarity=-0.016 Sum_probs=68.9
Q ss_pred HHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-----------------------CCCCH
Q 010864 150 AIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----------------------CPTLH 206 (498)
Q Consensus 150 al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----------------------~p~~~ 206 (498)
.+...|.++..-|.+|.+|...|+ +++|..+|++|-.- .....
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge--------------~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 899 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKE--------------AVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLS 899 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSH
T ss_pred HhhhccCCcHHHHHHHHHHHhcCC--------------HHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHH
Confidence 445678888888999999999999 99999999887321 11123
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCH----HHHHHHHHHHHHhcCcchHH
Q 010864 207 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSP----QALNNWGLALQELSAIVPAR 271 (498)
Q Consensus 207 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P-~~~----~a~~~lg~~l~~~g~~~~a~ 271 (498)
..|+.+..++.+ .+.++.++ ...+.|++..+ ++. ..|.++=..+..+|+|++|+
T Consensus 900 ~YY~hv~~LFe~----~~~~~~vi-------~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay 958 (1139)
T 4fhn_B 900 CYYLHLSKKLFE----ESAYIDAL-------EFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAH 958 (1139)
T ss_dssp HHHHHHHHHHHH----TSCCHHHH-------HHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGG
T ss_pred HHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 445566666666 78888888 45566665443 333 25778888899999995553
No 338
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=65.71 E-value=3.5 Score=41.74 Aligned_cols=94 Identities=16% Similarity=0.254 Sum_probs=52.7
Q ss_pred hhhccccCCCCCCCCCCchhhhhhhhccc-hhhhhhhcccchhhccccccCCCCCCCCCCccccccCCcccccccccCC-
Q 010864 366 LKAGYLTAPPAGIPVAPHSDWKRSQFVLN-HEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL- 443 (498)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~w~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 443 (498)
+++||+.-- ..-...|+++||+|. ...+..+...... .....||+..+...+ |.-.
T Consensus 7 ~keG~L~K~-----g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~----------------~~~~~i~l~~~~~~~-~~~~~ 64 (446)
T 4ejn_A 7 VKEGWLHKR-----GEYIKTWRPRYFLLKNDGTFIGYKERPQD----------------VDQREAPLNNFSVAQ-CQLMK 64 (446)
T ss_dssp EEEEEEEEE-----ETTTTEEEEEEEEEETTSBEEEESSCC-----------------------CCCGGGBCTT-CEEEE
T ss_pred EEEeeEEee-----ccccccccceEEEEeeCCEEEEEecCCCC----------------CccCcccccCccccc-eeecC
Confidence 446776632 222458999999996 4555543321110 112345555433221 1111
Q ss_pred -CCCCCCeeeEeecCCce----eeeecChhhhhhHHHHHHHHH
Q 010864 444 -TLPPGAGLCIETIHGPV----FLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 444 -~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~ 481 (498)
.-+..+.|.+.+..... ++.+++.+..+.|.+||+-+.
T Consensus 65 ~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i 107 (446)
T 4ejn_A 65 TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 107 (446)
T ss_dssp ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhh
Confidence 12334577777655544 588999999999999999874
No 339
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=65.35 E-value=98 Score=29.62 Aligned_cols=107 Identities=10% Similarity=-0.039 Sum_probs=73.1
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhh
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER-----NPEDYDALYNWALVLQESADNVSLDSTSPSKDAL 187 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~ 187 (498)
..++++|++++...... +.+.|++..|.++..-.++. .+-+.+....+..++..... ....+...
T Consensus 46 ~~~~~eAidlL~~ga~~----ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~------~~~~r~~f 115 (312)
T 2wpv_A 46 SKSYEHAIELISQGALS----FLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDP------SEPNLKDV 115 (312)
T ss_dssp TTCHHHHHHHHHHHHHH----HHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCT------TCTTHHHH
T ss_pred hcCHHHHHHHHHHHHHH----HHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCC------CCchHHHH
Confidence 46788999998887766 67778888877764444432 24455566666666654332 23344555
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 233 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 233 (498)
..+|+++-.+.-...-.++..|..+|..|.. .|++.+|..+|
T Consensus 116 i~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~----e~~~~~A~~H~ 157 (312)
T 2wpv_A 116 ITGMNNWSIKFSEYKFGDPYLHNTIGSKLLE----GDFVYEAERYF 157 (312)
T ss_dssp HHHHHHHHHHTSSCTTCCHHHHHHHHHHHHH----TTCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHhh----cCCHHHHHHHH
Confidence 6666666555433333689999999999999 99999999766
No 340
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=62.34 E-value=1.6e+02 Score=31.06 Aligned_cols=114 Identities=11% Similarity=-0.052 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH-H---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010864 188 LEEACKKYDEATRLCPTLHDAF-Y---NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 263 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~-~---~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~ 263 (498)
.+.|...+.+......-+.... . .++.-+.. .+...++. ..+.+......++...-...+.++ +
T Consensus 230 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~----~~~~~~~~-------~~~~~~~~~~~~~~~~e~~~r~Al-r 297 (618)
T 1qsa_A 230 AENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMG----NDVTDEQA-------KWRDDAIMRSQSTSLIERRVRMAL-G 297 (618)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCS----TTCCHHHH-------HHHHHHHHTCCCHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHH----cCCChHHH-------HHHHhccccCCChHHHHHHHHHHH-H
Confidence 7788888877654433332222 2 22222222 33234444 355555544444444444555554 5
Q ss_pred hcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHHHHHh
Q 010864 264 LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 342 (498)
Q Consensus 264 ~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 342 (498)
.|++ +.|..+|++.-.-........|-+|.++..+|+ -.+|..+|.++..
T Consensus 298 ~~d~----------~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~-------------------~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 298 TGDR----------RGLNTWLARLPMEAKEKDEWRYWQADLLLERGR-------------------EAEAKEILHQLMQ 347 (618)
T ss_dssp HTCH----------HHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHT
T ss_pred CCCH----------HHHHHHHHHccccccccHhHHHHHHHHHHHcCC-------------------HHHHHHHHHHHhc
Confidence 6888 999999987655445668889999999999998 5778888888775
No 341
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.36 E-value=25 Score=36.42 Aligned_cols=125 Identities=14% Similarity=0.038 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHH-----------hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-------HHHHHHHHHH-hcCC
Q 010864 188 LEEACKKYDEATR-----------LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK-------QATKNYEKAV-QLNW 248 (498)
Q Consensus 188 ~~~A~~~~~~Al~-----------l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~-------~Al~~~~~Al-~l~P 248 (498)
|++|.++-...+. +++=.+.+|+.++.++.. .|+..+...... .-+..++.|. ..|+
T Consensus 152 ~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~----~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~ 227 (523)
T 4b4t_S 152 LEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHET----LARSSEEINSDNQNIILRSTMMKFLKIASLKHDN 227 (523)
T ss_dssp -------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHH----hcccccccccccchhhHHHHHHHHHHHHhcccCc
Confidence 8888777665541 144456788888888877 777665432111 1122333332 3344
Q ss_pred C-CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHcchhHHhccCCCC
Q 010864 249 N-SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF-------HRAIYNLGTVLYGLAEDTLRTGGTVN 320 (498)
Q Consensus 249 ~-~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~-------~~a~~~Lg~~~~~~g~~~~~~~~~~~ 320 (498)
. .+..++.+=..|...+.| ++|..+..++. .|.. ..-+|.+|.++.-+++
T Consensus 228 ~~qa~l~nllLRnYL~~~~y----------~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~---------- 285 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEV----------DSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLD---------- 285 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCS----------TTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTC----------
T ss_pred chhHHHHHHHHHHHHccCcH----------HHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhcc----------
Confidence 3 456678888889999999 99999999985 3332 4456778888888888
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCCH
Q 010864 321 PREVSPNELYSQSAIYIAAAHALKPSY 347 (498)
Q Consensus 321 ~~~~~~~~~~~~A~~~~~~Al~l~p~~ 347 (498)
|.+|..++..|+..-|.+
T Consensus 286 ---------Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 286 ---------YSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp ---------HHHHHHHHHHHTSSCSCS
T ss_pred ---------HHHHHHHHHHHHHhCCcc
Confidence 999999999999887754
No 342
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=54.18 E-value=11 Score=29.10 Aligned_cols=46 Identities=20% Similarity=0.253 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC
Q 010864 187 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW 248 (498)
Q Consensus 187 ~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P 248 (498)
.+++|..+..++|.++-.+ . .|+-++|+++|++.+..+.+.+.+.-
T Consensus 12 ~h~~AF~~Is~aL~~DE~~------------~----~G~k~~A~~~YkkGi~eL~~Gi~V~~ 57 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDE------------K----AGQKEQAVEWYKKGIEELEKGIAVIV 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHS------------C----SSSGGGSHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhhhcc------------c----CCCHHHHHHHHHHHHHHHHhhcCCcc
Confidence 4777777777777665311 0 29999999999999999999998754
No 343
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=53.58 E-value=69 Score=33.92 Aligned_cols=80 Identities=13% Similarity=-0.069 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
..++...+.+......++.......+.+ .. .|++..|. ..|++.-..........+-+|.++..+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r~A-lr----~~d~~~a~-------~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~ 335 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVRMA-LG----TGDRRGLN-------TWLARLPMEAKEKDEWRYWQADLLLERGRE 335 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHHHH-HH----HTCHHHHH-------HHHHHSCTTGGGSHHHHHHHHHHHHHTTCH
T ss_pred ChHHHHHHHhccccCCChHHHHHHHHHH-HH----CCCHHHHH-------HHHHHccccccccHhHHHHHHHHHHHcCCH
Confidence 4566777777665444433333344443 35 78999888 466554333335688899999999999999
Q ss_pred chHHhhhhhHHHHHHHHHHHHH
Q 010864 268 VPAREKQTIVRTAISKFRAAIQ 289 (498)
Q Consensus 268 ~~a~~~~~~~~~Ai~~~~~Al~ 289 (498)
++|..+|+++..
T Consensus 336 ----------~~a~~~~~~~a~ 347 (618)
T 1qsa_A 336 ----------AEAKEILHQLMQ 347 (618)
T ss_dssp ----------HHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHhc
Confidence 999999999975
No 344
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=51.33 E-value=1.2e+02 Score=26.33 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 231 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 231 (498)
++.|.+..+.. ++...|..||..... .|+++-|+.
T Consensus 21 l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~----~gn~~lAe~ 55 (177)
T 3mkq_B 21 LDAALDEAKKL-----NDSITWERLIQEALA----QGNASLAEM 55 (177)
T ss_dssp HHHHHHHHHHH-----CCHHHHHHHHHHHHH----TTCHHHHHH
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHH----cCChHHHHH
Confidence 88887776554 677888899988888 899888884
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.47 E-value=1.7e+02 Score=32.62 Aligned_cols=86 Identities=14% Similarity=-0.015 Sum_probs=59.5
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------HHHHHHh-cCCC--CHHHHHHHHHH
Q 010864 197 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK-------------NYEKAVQ-LNWN--SPQALNNWGLA 260 (498)
Q Consensus 197 ~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~-------------~~~~Al~-l~P~--~~~a~~~lg~~ 260 (498)
..+...|.++-.-|-+|.+|.. .|++++|..+|++|-. .....+. ..++ ....|.+...+
T Consensus 831 eL~~~~~~t~~~~yv~gr~~L~----~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~L 906 (950)
T 4gq2_M 831 QLIGWLNSDPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK 906 (950)
T ss_dssp HHGGGCCSSHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHH
T ss_pred HHHhhcCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHH
Confidence 4556688888888999999999 9999999987765321 1111111 1112 23456677777
Q ss_pred HHHhcCcchHHhhhhhHHHHHHHHHHHHHh-cCCCHH
Q 010864 261 LQELSAIVPAREKQTIVRTAISKFRAAIQL-QFDFHR 296 (498)
Q Consensus 261 l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-~P~~~~ 296 (498)
+.+.+.+ +.++..-+.||+. .+++..
T Consensus 907 FE~~~a~----------~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 907 LFEESAY----------IDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHHTTCH----------HHHHHHHHHHHHTCCSCCHH
T ss_pred HHhcCCH----------HHHHHHHHHHHhhcccCCcc
Confidence 7777777 9999999999975 456654
No 346
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=47.19 E-value=2e+02 Score=27.70 Aligned_cols=152 Identities=13% Similarity=0.021 Sum_probs=92.5
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhh
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER-----NPEDYDALYNWALVLQESADNVSLDSTSPSKDAL 187 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~ 187 (498)
..++++|++++...... +.+.|++.-|.++..-.++. -+-+.+....+..++..... ....+...
T Consensus 48 ~k~y~eAidLL~~GA~~----ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~------~~p~r~~f 117 (336)
T 3lpz_A 48 QGNWAAAVDILASVSQT----LLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQP------GEPVRKRF 117 (336)
T ss_dssp TTCHHHHHHHHHHHHHH----HHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCT------TCHHHHHH
T ss_pred hcCHHHHHHHHHHHHHH----HHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCC------CCcHHHHH
Confidence 47788999998887766 66778877777665444332 13344556666666654332 23345556
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-----H----HHHHHHHHHhcCCCCHHHHHHHH
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK-----Q----ATKNYEKAVQLNWNSPQALNNWG 258 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~-----~----Al~~~~~Al~l~P~~~~a~~~lg 258 (498)
..+|+++-.+.=...-.++..|..+|..|.+ .+++.+|...|- . |--.++-..+..|.....+...+
T Consensus 118 i~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~----e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRa 193 (336)
T 3lpz_A 118 VKEMIDWSKKFGDYPAGDPELHHVVGTLYVE----EGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARA 193 (336)
T ss_dssp HHHHHHHHHHHSSCTTCCHHHHHHHHHHHHH----TTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHc----cCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 6777777665222234689999999999999 999999997651 1 11111211223345555555555
Q ss_pred HH-HHHhcCcchHHhhhhhHHHHHHHHHHHH
Q 010864 259 LA-LQELSAIVPAREKQTIVRTAISKFRAAI 288 (498)
Q Consensus 259 ~~-l~~~g~~~~a~~~~~~~~~Ai~~~~~Al 288 (498)
.+ |..+++. ..|...|..-+
T Consensus 194 VL~yL~l~n~----------~~A~~~~~~f~ 214 (336)
T 3lpz_A 194 VLPYLLVANV----------RAANTAYRIFT 214 (336)
T ss_dssp HHHHHHTTCH----------HHHHHHHHHHH
T ss_pred HHHHHHhCCH----------HHHHHHHHHHH
Confidence 43 5556666 77777554444
No 347
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=46.42 E-value=87 Score=26.43 Aligned_cols=53 Identities=17% Similarity=0.005 Sum_probs=41.4
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh
Q 010864 135 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL 201 (498)
Q Consensus 135 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 201 (498)
..+|+-++--..+...+.-++-+++.+..+|.+|...|+ ..+|-+.+.+|-+-
T Consensus 102 v~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~--------------~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGD--------------ERDATTLLIEACKK 154 (172)
T ss_dssp HHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHT
T ss_pred HHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcc--------------hhhHHHHHHHHHHh
Confidence 345666666667776666677789999999999999999 99999999988764
No 348
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=45.23 E-value=27 Score=26.38 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=25.0
Q ss_pred hcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 114 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
.-.+.|+.+..+++.. -+.|+|.+|+.+|.++++.
T Consensus 14 ~~~~~Ai~lv~~Ave~-----D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 14 MLEEMARKYAINAVKA-----DKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HHhccHHHHHHHHHHHHHH
Confidence 3456788888887766 4467888888888877653
No 349
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=43.04 E-value=31 Score=26.03 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 116 NNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 116 ~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
...|+.+..+++.. -+.|+|.+|+.+|.++++.
T Consensus 8 ~~~Ai~lv~~Ave~-----D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKA-----DKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----HHhccHHHHHHHHHHHHHH
Confidence 45777777777665 4467788888888877653
No 350
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=42.78 E-value=5.1 Score=37.43 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 186 ALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 186 ~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
.....|+....+|++.+- .|+|.+|+.+|++|+..+..+++..|+.
T Consensus 18 p~~~~Ai~lv~~AVe~D~-------------------~g~y~eAl~lY~eaIe~Ll~alk~e~d~ 63 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDS-------------------ESRYPQALVCYQEGIDLLLQVLKGTKDN 63 (257)
T ss_dssp -----------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 347788888888887663 8999999999999999999999877653
No 351
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=40.72 E-value=2.3e+02 Score=26.46 Aligned_cols=196 Identities=12% Similarity=0.072 Sum_probs=109.3
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc----------CCCCCCCCchhhhHHHHHHHHHHHHHhCCC---
Q 010864 138 RILTFAAKRYANAIERNPEDYDALYNWALVLQESADN----------VSLDSTSPSKDALLEEACKKYDEATRLCPT--- 204 (498)
Q Consensus 138 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~----------~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~--- 204 (498)
.-|+.|++..+--++..|++....+.++.++++.=+. ....+.........++|+.+++..-+-.|.
T Consensus 99 eFFDaALERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~~Laqk~~e~~t 178 (346)
T 3qtm_A 99 SYIDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLRPLAQDSTEYFD 178 (346)
T ss_dssp HHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHHHHHSTTSCCCT
T ss_pred HHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHHHhhChhhcc
Confidence 3467788888888889999999988888888765331 111222233456688899888855544333
Q ss_pred -----CHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHH--hcCCCCHH-----HHHHHHHHHH-------Hh
Q 010864 205 -----LHDAFYNWAIAISDRAKMRG-RTKEAEELWKQATKNYEKAV--QLNWNSPQ-----ALNNWGLALQ-------EL 264 (498)
Q Consensus 205 -----~~~a~~~lg~~~~~~~~~~g-~~~eA~~~~~~Al~~~~~Al--~l~P~~~~-----a~~~lg~~l~-------~~ 264 (498)
..+-.+.|...+.+ -| ++.++. ...-+-..+...+ ..+|+.+. ++..++.++. .+
T Consensus 179 ~~tld~~rpl~~lS~yl~~----~~~~~SE~f-lldvc~~~t~l~lks~~d~nTpa~~kl~Aq~av~t~~t~vAeyy~DL 253 (346)
T 3qtm_A 179 ALTPDSLRPLYILSSYLFQ----FGDQFSEAF-LLDVCSIITALWLKSVVDPNTPAYYKLIAQEAVLNNYTTFAEYYMDL 253 (346)
T ss_dssp TCCTTTTTTHHHHHHHHHH----TGGGSCHHH-HHHHHHHHHHHHHHTTCSTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHH----hccchHHHH-HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 33444555555544 33 333433 1111111222222 33454332 3334444433 33
Q ss_pred cCcch-----H-HhhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCChhHHHHHHHHHHH
Q 010864 265 SAIVP-----A-REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 338 (498)
Q Consensus 265 g~~~~-----a-~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~Lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 338 (498)
-+-.+ + .....++..|+..|+...-++.+ ++.++.++.+.+.+|+.- . .+.+-...+.+|..+++
T Consensus 254 lDd~es~vdd~~~kA~~~L~~aid~~~~~y~ldk~-~e~l~~lAd~kmdlan~~-------~-~Ed~Qdk~l~EA~~~ir 324 (346)
T 3qtm_A 254 LDNSESNVDDLINKASSWLNNSVDTWNVIYTLDKS-PERLLKLADIKMDLAQIV-------Q-DEASQDNYLKEACNAIK 324 (346)
T ss_dssp HTC----CHHHHHHHHHHHHHHHHHHHHHHHHSCC-GGGHHHHHHHHHHHHHHC-------S-CHHHHHHHHHHHHHHHH
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccC-HHHHHHHHHHHHHHHHHc-------c-ChhhHHHHHHHHHHHHH
Confidence 22111 1 23356778888888877666544 677788888888777511 0 11112335788888888
Q ss_pred HHHhcCCCH
Q 010864 339 AAHALKPSY 347 (498)
Q Consensus 339 ~Al~l~p~~ 347 (498)
+|..+.-+.
T Consensus 325 eAq~~Gv~l 333 (346)
T 3qtm_A 325 EAQGSGVEL 333 (346)
T ss_dssp HHHHTTCCC
T ss_pred HHHhcCCCC
Confidence 887765443
No 352
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.28 E-value=2.9e+02 Score=27.51 Aligned_cols=89 Identities=7% Similarity=-0.034 Sum_probs=63.7
Q ss_pred HHhhccHHHHHHHHHHHHHhCC--C----CHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh---CCC
Q 010864 134 RSRQRILTFAAKRYANAIERNP--E----DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---CPT 204 (498)
Q Consensus 134 ~~~~g~~~~A~~~~~~al~~~P--~----~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---~p~ 204 (498)
+...|++.+|...+.....-.- . -.+.+.....+|...++ +.+|...+.++... .+.
T Consensus 147 ~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d--------------~~~a~~~~~ki~~~~~~~~~ 212 (445)
T 4b4t_P 147 KKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGD--------------YSQATVLSRKILKKTFKNPK 212 (445)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHSSC
T ss_pred HHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHhhcccCC
Confidence 5567999999999988753211 1 14677888888999999 99999999987431 333
Q ss_pred C----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 010864 205 L----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNY 240 (498)
Q Consensus 205 ~----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~ 240 (498)
. ...+...|..+.. .++|.+|-.+|.++...+
T Consensus 213 ~~~lk~~~~~~~~~~~~~----e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 213 YESLKLEYYNLLVKISLH----KREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp CHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHhcc
Confidence 3 2456677788877 999999996555554443
No 353
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=38.93 E-value=78 Score=30.98 Aligned_cols=67 Identities=16% Similarity=0.044 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAE 230 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~ 230 (498)
.+|.++.+||.+--.. |...... ++..|.+|+.. +-.+..-|..+|-.+.+ .+++.+|+
T Consensus 253 rYPmALgnLgDLEe~~-----pt~gr~~-------~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR----~~~~reAl 316 (472)
T 3re2_A 253 TYPMAIANLGDLEEIS-----PTPGRPP-------AEELFKEAITVAKREYSDHHIYPYTYLGGYYYR----KKKYYEAI 316 (472)
T ss_dssp TCHHHHHHHHHHHHHS-----CCTTSCC-------HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHH
T ss_pred hCchhhcchhhHHhcC-----CCCCCCC-------HHHHHHHHHHHHHHHhccCCccchhhhhhhhhh----cchHHHHH
Confidence 4566777776654422 2222222 45555555544 44466778888888888 99999999
Q ss_pred HHHHHHHH
Q 010864 231 ELWKQATK 238 (498)
Q Consensus 231 ~~~~~Al~ 238 (498)
..|.+|-.
T Consensus 317 ~~WA~Aa~ 324 (472)
T 3re2_A 317 ASWVDAGY 324 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87765543
No 354
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=38.49 E-value=1.2e+02 Score=25.51 Aligned_cols=78 Identities=17% Similarity=0.039 Sum_probs=51.4
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWAL-VLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 215 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~-~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~~~lg~~ 215 (498)
-|++..-+.+|-+. +-.+ -|.++|. ++..+|+ -++-.+.+...+.-++-+++.++.+|.+
T Consensus 74 C~NlKrVi~C~~~~---n~~s--e~vd~ALd~lv~~~K--------------kDqLdki~~~~l~n~~~~~~~l~kia~A 134 (172)
T 1wy6_A 74 CQNLKSVVECGVIN---NTLN--EHVNKALDILVIQGK--------------RDKLEEIGREILKNNEVSASILVAIANA 134 (172)
T ss_dssp CSCTHHHHHHHHHT---TCCC--HHHHHHHHHHHHTTC--------------HHHHHHHHHHHC--CCSCHHHHHHHHHH
T ss_pred hhcHHHHHHHHHHh---cchH--HHHHHHHHHHHHhcc--------------HhHHHHHHHHHhccCCCChHHHHHHHHH
Confidence 45666666666543 2121 2344443 3445666 7777777777666677789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHH
Q 010864 216 ISDRAKMRGRTKEAEELWKQAT 237 (498)
Q Consensus 216 ~~~~~~~~g~~~eA~~~~~~Al 237 (498)
|.+ .|+..+|.++..+|.
T Consensus 135 y~K----lg~~r~a~eLl~~AC 152 (172)
T 1wy6_A 135 LRR----VGDERDATTLLIEAC 152 (172)
T ss_dssp HHH----TTCHHHHHHHHHHHH
T ss_pred HHH----hcchhhHHHHHHHHH
Confidence 999 999999997555543
No 355
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=36.95 E-value=31 Score=30.22 Aligned_cols=35 Identities=34% Similarity=0.387 Sum_probs=30.7
Q ss_pred CCCCCCeeeEeecCCc--eeeeecChhhhhhHHHHHH
Q 010864 444 TLPPGAGLCIETIHGP--VFLVADSWEALDGWLDAIR 478 (498)
Q Consensus 444 ~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~ 478 (498)
+-|++..|.|...+|. ++|++.|..++..|..||.
T Consensus 137 tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~ 173 (178)
T 2adz_A 137 TDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQ 173 (178)
T ss_dssp SCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHH
Confidence 4458999999988886 4999999999999999995
No 356
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=36.53 E-value=1.9e+02 Score=28.09 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL 201 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 201 (498)
..+++|+|.+|...+.... .......+.|+.+|++|-.+
T Consensus 117 a~VLfNiaal~s~~a~~~~-----r~~~~glK~A~~~fq~AAG~ 155 (363)
T 3rau_A 117 ACILYNLGALHSMLGAMDK-----RVSEEGMKVSCTHFQCAAGA 155 (363)
T ss_dssp HHHHHHHHHHHHHHHHHSC-----CCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-----cCChHHHHHHHHHHHHHHHH
Confidence 4678899999988775211 11233467777777777554
No 357
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=35.02 E-value=47 Score=25.24 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=24.4
Q ss_pred hcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 114 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
.+...|..+..+++.. -..|+|++|+.+|..+++.
T Consensus 11 ~~~~~A~~lv~~Ave~-----D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 11 PQSTAAATVLKRAVEL-----DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp CHHHHHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHH
Confidence 3455677777777765 3467788888888887753
No 358
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=34.31 E-value=60 Score=25.06 Aligned_cols=30 Identities=23% Similarity=0.039 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL 201 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 201 (498)
+..+-.++..+...|+ |++||++.++|..+
T Consensus 15 AH~~~RrAe~ll~~gk--------------ydeAIech~kAa~y 44 (97)
T 2crb_A 15 AHQQSRRADRLLAAGK--------------YEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCC--------------HHHHHHHHHHHHHH
Confidence 4556678888888898 99999999888653
No 359
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=33.88 E-value=1.9e+02 Score=24.65 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=42.6
Q ss_pred HHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHHHHHHHHcCCHHHHHHHHH
Q 010864 162 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYN-WAIAISDRAKMRGRTKEAEELWK 234 (498)
Q Consensus 162 ~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~------~~a~~~-lg~~~~~~~~~~g~~~eA~~~~~ 234 (498)
+.-|..++..|+ |=+|-+.++.+-.-.+.. ...+.. ++.++.. ...|+..-|..++.
T Consensus 36 ~~~~i~lFn~g~--------------yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H--~~rgN~~GA~~ll~ 99 (161)
T 2ijq_A 36 VVHGVRLYNSGE--------------FHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKH--FDFEDDDGMRSLFR 99 (161)
T ss_dssp HHHHHHHHHTTC--------------HHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC--------------chHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH--HHhCCHHHHHHHHH
Confidence 445677788888 999999999998876554 223344 4444433 34799999996665
Q ss_pred HHHHHHH
Q 010864 235 QATKNYE 241 (498)
Q Consensus 235 ~Al~~~~ 241 (498)
+|+..+.
T Consensus 100 ~Al~~L~ 106 (161)
T 2ijq_A 100 TSLQYFR 106 (161)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555444
No 360
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=32.56 E-value=51 Score=26.63 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 115 QNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 115 ~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
-...|+.++.+++.. -..|+|++|+.+|..++++
T Consensus 14 ~l~kAi~lv~~Ave~-----D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 14 NLQKAIDLASKAAQE-----DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHH-----HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHH
Confidence 456788888887755 3457777777777777653
No 361
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=32.34 E-value=50 Score=25.45 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=24.6
Q ss_pred hcHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 114 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 114 ~~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
.-.+.|+.++.+++.. -..|+|++|+.+|..+++.
T Consensus 10 ~~l~~Ai~lv~~Ave~-----D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVEL-----DAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp CHHHHHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HHhCCHHHHHHHHHHHHHH
Confidence 4466888888888766 3457777777777777653
No 362
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=31.75 E-value=1e+02 Score=22.67 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHHH
Q 010864 162 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 209 (498)
Q Consensus 162 ~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a~ 209 (498)
..+|..+...|+ +++|..+|-+|+...|+-....
T Consensus 21 V~~GE~L~~~g~--------------~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGD--------------YEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTC--------------HHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCC--------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 467999999999 9999999999999988865543
No 363
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=31.59 E-value=59 Score=24.39 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHhhhcchhhHHhhccHHHHHHHHHHHHHh
Q 010864 115 QNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 153 (498)
Q Consensus 115 ~~~~A~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 153 (498)
-...|..++.+++.. -..|+|++|+.+|..+++.
T Consensus 9 ~l~~A~~l~~~Av~~-----D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 9 FLTKGIELVQKAIDL-----DTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHH-----HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHH
Confidence 356777777777655 3457888888888887763
No 364
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=30.58 E-value=1.2e+02 Score=30.25 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=30.2
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010864 191 ACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 237 (498)
Q Consensus 191 A~~~~~~Al~l-----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al 237 (498)
++..|.+|+.. +-.+..-|..+|-.+.+ .+++.+|+..|..|-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR----~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR----NRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhh----cchHHHHHHHHHHHH
Confidence 45555555554 34456678888888888 999999997665554
No 365
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=29.56 E-value=47 Score=31.06 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=29.0
Q ss_pred CCCeeeEeecCCc--eeeeecChhhhhhHHHHHHH
Q 010864 447 PGAGLCIETIHGP--VFLVADSWEALDGWLDAIRL 479 (498)
Q Consensus 447 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~ 479 (498)
+.++|.++...|. .+|+++|..++.+|..||.-
T Consensus 225 ~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~ 259 (263)
T 1z87_A 225 EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQA 259 (263)
T ss_dssp SSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHH
Confidence 8889999987785 49999999999999999963
No 366
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=29.53 E-value=3.4e+02 Score=27.32 Aligned_cols=100 Identities=8% Similarity=-0.083 Sum_probs=65.1
Q ss_pred hhhhHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH--HHhcCCC
Q 010864 184 KDALLEEACKKYDEATRLCPT------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK--AVQLNWN 249 (498)
Q Consensus 184 ~~~~~~~A~~~~~~Al~l~p~------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~--Al~l~P~ 249 (498)
+...++++.....++..+.-+ .-...+.++..+.+.|.+.++..-+...+. +++.-.- -+...|.
T Consensus 138 ~~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k-~i~~~~~~p~~~~~p~ 216 (455)
T 3t5v_B 138 SHQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFK-NFQPKSMLAHFNEYQL 216 (455)
T ss_dssp TTHHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHH-THHHHCCCSCGGGSCH
T ss_pred chhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHH-HhccCCCCcChhhCCc
Confidence 345699999999999998322 123444455555555666999988884221 1111000 0111121
Q ss_pred --CHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh-cCCC
Q 010864 250 --SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-QFDF 294 (498)
Q Consensus 250 --~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l-~P~~ 294 (498)
-...++.+|.++...++| .+|..++..|++. -|..
T Consensus 217 ~q~v~Y~YYlGr~~~~~~~y----------~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 217 DQQIEYRYLLGRYYLLNSQV----------HNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHCC
T ss_pred cceEeeeHHHHHHHHHHccH----------HHHHHHHHHHHHhcCCcc
Confidence 346689999999999999 9999999999998 6654
No 367
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=29.32 E-value=3.5e+02 Score=26.34 Aligned_cols=105 Identities=20% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhc------------CcCCCCCCCCchhhhHHHHHHHHHHHHHh----------------------CC
Q 010864 158 YDALYNWALVLQESA------------DNVSLDSTSPSKDALLEEACKKYDEATRL----------------------CP 203 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g------------~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----------------------~p 203 (498)
..+++|+|.+|.+.+ . .+.|+.+|++|-.+ +|
T Consensus 114 a~VLfNiaal~sq~A~~~~~~~r~~~e~--------------lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~Dls~ 179 (376)
T 3r9m_A 114 ISMGFNVALWYTKYASRLAGKENITEDE--------------AKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLES 179 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCHHH--------------HHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTSTTSH
T ss_pred HHHHHHHHHHHHHHHHHhhccccCChHH--------------HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccCH
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHH----------HHHHHHHHHHHHHHhcCCCC--------------------HHH
Q 010864 204 TLHDAFYNWAIAISDRAKMRGRTKEAE----------ELWKQATKNYEKAVQLNWNS--------------------PQA 253 (498)
Q Consensus 204 ~~~~a~~~lg~~~~~~~~~~g~~~eA~----------~~~~~Al~~~~~Al~l~P~~--------------------~~a 253 (498)
+...++..+..+... .--+..|+ ++-.++..+|++|...--.. +.+
T Consensus 180 ~~l~~L~~l~LAQAQ----E~~~~Kai~~~~k~~liAKLa~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A 255 (376)
T 3r9m_A 180 RLIEAYVIQCQAEAQ----EVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYA 255 (376)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHh
Q 010864 254 LNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 290 (498)
Q Consensus 254 ~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l 290 (498)
++..|..+...+++ -+||..++.|.+.
T Consensus 256 ~y~~a~~~~~~~k~----------GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 256 YCYHGETLLASDKC----------GEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCh----------HHHHHHHHHHHHH
No 368
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=28.52 E-value=1.4e+02 Score=29.82 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Q 010864 156 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAE 230 (498)
Q Consensus 156 ~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----~p~~~~a~~~lg~~~~~~~~~~g~~~eA~ 230 (498)
.+|.++.+||.+---. +..... .++..|++|+.. +-.+...|..+|-.+.+ .+++.+|+
T Consensus 260 ~YPmALgnLgDLEei~-----pt~grp-------~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R----~~~~~eAl 323 (489)
T 4gq4_A 260 RYPMALGNLADLEELE-----PTPGRP-------DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR----NRNVREAL 323 (489)
T ss_dssp TCHHHHHHHHHHHHHS-----CCTTSC-------CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHH
T ss_pred hcchhhhcccCHhhcC-----CCCCCC-------CHHHHHHHHHHHHHHhcccCcccceeecchHHHH----hhhHHHHH
Confidence 4567777777665322 222222 234455555553 44456778888888888 99999999
Q ss_pred HHHHHHH
Q 010864 231 ELWKQAT 237 (498)
Q Consensus 231 ~~~~~Al 237 (498)
..|..|-
T Consensus 324 ~~wa~aa 330 (489)
T 4gq4_A 324 QAWADTA 330 (489)
T ss_dssp HHHHHHH
T ss_pred HHhhhhh
Confidence 7776553
No 369
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=27.55 E-value=1.2e+02 Score=26.88 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhCCCCHHH
Q 010864 159 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDA 208 (498)
Q Consensus 159 ~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~p~~~~a 208 (498)
.-+|.+|.++...++ |.+|.+.+..|++..|.....
T Consensus 15 ~Y~YYlGr~~~~~~~--------------y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSD--------------FKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHCCHhHHH
Confidence 457899999999999 999999999999998876543
No 370
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=27.24 E-value=6.5e+02 Score=28.01 Aligned_cols=109 Identities=15% Similarity=0.044 Sum_probs=59.6
Q ss_pred hHHhhccHHHHHHHHHHHHHhCC---C---CH----HHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHhC
Q 010864 133 GRSRQRILTFAAKRYANAIERNP---E---DY----DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC 202 (498)
Q Consensus 133 ~~~~~g~~~~A~~~~~~al~~~P---~---~~----~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~ 202 (498)
|....|...+++.++...+.-+. . +. .+-..||.+|...++ +++.+.+...+.-+
T Consensus 420 Gli~ag~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~---------------eev~e~L~~~L~dd 484 (963)
T 4ady_A 420 GLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN---------------IEVYEALKEVLYND 484 (963)
T ss_dssp HHHTTTTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC---------------HHHHHHHHHHHHTC
T ss_pred HHhcCCCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHhcC
Confidence 33344544567887777776432 1 11 345577777766554 56777777777644
Q ss_pred CCCH--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCc
Q 010864 203 PTLH--DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 267 (498)
Q Consensus 203 p~~~--~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 267 (498)
.... .+-+.||.++.. .|+-+-.. .....+.+-..+...-...+|..+...|+.
T Consensus 485 ~~~~~~~AalALGli~vG----Tgn~~ai~-------~LL~~~~e~~~e~vrR~aalgLGll~~g~~ 540 (963)
T 4ady_A 485 SATSGEAAALGMGLCMLG----TGKPEAIH-------DMFTYSQETQHGNITRGLAVGLALINYGRQ 540 (963)
T ss_dssp CHHHHHHHHHHHHHHHTT----CCCHHHHH-------HHHHHHHHCSCHHHHHHHHHHHHHHTTTCG
T ss_pred CHHHHHHHHHHHhhhhcc----cCCHHHHH-------HHHHHHhccCcHHHHHHHHHHHHhhhCCCh
Confidence 3221 345567777766 67655444 344444443333333334444555566775
No 371
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=26.74 E-value=2.2e+02 Score=31.64 Aligned_cols=45 Identities=18% Similarity=0.139 Sum_probs=36.2
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHH
Q 010864 137 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEAT 199 (498)
Q Consensus 137 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al 199 (498)
.+.++-| .+.+...|.++-.-|.+|.+|...|+ +++|..+|++|-
T Consensus 823 ~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge--------------~~~A~~~F~kAA 867 (950)
T 4gq2_M 823 FKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKE--------------AVKAVRCFKTTS 867 (950)
T ss_dssp TTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTC--------------HHHHHHHHHTCC
T ss_pred hcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHh
Confidence 4555433 34556778898888999999999999 999999999874
No 372
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=26.22 E-value=1.3e+02 Score=22.14 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCHHHH
Q 010864 255 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAI 298 (498)
Q Consensus 255 ~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~~a~ 298 (498)
..+|..+...|++ ++|+.+|-+|+..-|+=...+
T Consensus 21 V~~GE~L~~~g~~----------~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGDY----------EKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTCH----------HHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCCH----------HHHHHHHHHHHHHcCCHHHHH
Confidence 4678889999998 999999999999988755443
No 373
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=26.13 E-value=86 Score=28.27 Aligned_cols=51 Identities=22% Similarity=0.224 Sum_probs=34.2
Q ss_pred cccccCCcccccccccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHH
Q 010864 426 AIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIR 478 (498)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 478 (498)
.-.+++..|.++.+....+ ....|.+-|..--.+|.++|.+++++|+.||.
T Consensus 175 ~g~~~~~~i~s~~~~~~~~--~~~~f~iit~~r~~~~~a~s~~e~~~Wi~~lq 225 (228)
T 3tfm_A 175 VGTLDVGLIDSVCASDSPD--RPNSFVIITANRVLHCNADTPEEMHHWITLLQ 225 (228)
T ss_dssp SEEEEGGGEEEEEECCCSS--CTTEEEEEETTEEEEEECSSHHHHHHHHHHHC
T ss_pred cccCChhheeccccCCCCC--CCCcEEEEeCCceEEEEcCCHHHHHHHHHHHh
Confidence 3455666666665444333 44566666554444799999999999999984
No 374
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=26.01 E-value=3.9e+02 Score=28.50 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHH
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR 200 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 200 (498)
+.+++|+|.+|..++.... ......++.|+.+|++|-.
T Consensus 127 a~vLfNlaal~s~~A~~~~-----r~~~~~lK~A~~~fq~AAG 164 (704)
T 2xs1_A 127 SCVLFNCAALASQIAAEQN-----LDNDEGLKIAAKHYQFASG 164 (704)
T ss_dssp HHHHHHHHHHHHHHHHTSC-----TTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-----CCChHHHHHHHHHHHHHHH
Confidence 3567888888888776211 1123346677777776654
No 375
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=25.89 E-value=75 Score=25.32 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=35.9
Q ss_pred ccCCcccccccccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010864 429 IEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 481 (498)
Q Consensus 429 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 481 (498)
+|++++ .+.-+.|.. +-..+|.|.+......+-|++.++-..|.++|+-+.
T Consensus 56 ~~L~~~-~v~d~~d~~-~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 56 YPLDRL-AVVNVKDNP-PMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETK 106 (113)
T ss_dssp EETTTC-EEEEECCBT-TBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEcccC-EEEECCCCc-ccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 466653 233233322 457788888766667888999999999999999763
No 376
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=25.43 E-value=15 Score=37.26 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010864 188 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 250 (498)
Q Consensus 188 ~~~A~~~~~~Al~l~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~~~~~Al~l~P~~ 250 (498)
+++|++...+|++.+ . .|+|++|+.+|.+|+.+|.++++..+.+
T Consensus 8 ~~~A~~~~~~Av~~D---------------~----~g~~~eA~~~Y~~a~~~l~~~~k~e~~~ 51 (444)
T 2zan_A 8 LQKAIDLASKAAQED---------------K----AGNYEEALQLYQHAVQYFLHVVKYEAQG 51 (444)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHH---------------H----cCCHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 677888888886654 3 8999999999999999999999766433
No 377
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=25.03 E-value=8.3e+02 Score=28.30 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 010864 139 ILTFAAKRYANAIERNPEDYDALYNWALVLQES 171 (498)
Q Consensus 139 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 171 (498)
+.+++.++|++.++..|++..++..+-..+...
T Consensus 1122 ~~~~~~~~~~~l~~~~P~~l~~~~~~l~~l~~~ 1154 (1354)
T 3lxu_X 1122 ELEMAEKIYNDVVAAHPKHLQANLLLIQNIESN 1154 (1354)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCccHHHHHHHHHhhhhh
Confidence 357788999999999999999888776665543
No 378
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=24.14 E-value=3.8e+02 Score=23.76 Aligned_cols=107 Identities=8% Similarity=-0.004 Sum_probs=0.0
Q ss_pred hhcHHHHHHHHHHhhhcchhhHHhhcc--HHHHH-HHHHHHHHh---------CCCCHHHHHHHHHHHHHhcCcCCCCCC
Q 010864 113 AEQNNAAMELINSVTGVDEEGRSRQRI--LTFAA-KRYANAIER---------NPEDYDALYNWALVLQESADNVSLDST 180 (498)
Q Consensus 113 ~~~~~~A~~~~~~~~~~~~~~~~~~g~--~~~A~-~~~~~al~~---------~P~~~~a~~~lg~~~~~~g~~~~~~~~ 180 (498)
....+..++.+.+.+.-....+-..+. -..=. ..+++++.. ||.....|...+..+ ..+.
T Consensus 23 l~~~dDPL~~w~~YIkW~ee~yP~g~~~~~s~L~~~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~------- 94 (202)
T 3esl_A 23 LEDMDDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNN------- 94 (202)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTC-------
T ss_pred cccCCCchHHHHHHHHHHHHhCCCCCCcchhchHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccc-------
Q ss_pred CCchhhhHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010864 181 SPSKDALLEEACKKYDEATRL--CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK 238 (498)
Q Consensus 181 ~~~~~~~~~~A~~~~~~Al~l--~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~Al~ 238 (498)
..++...|...... .-..+..|..+|..+.. .|++.+|.+.|+.++.
T Consensus 95 -------~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~----~g~~~~A~~Vy~~GI~ 143 (202)
T 3esl_A 95 -------FHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN----AQFFLEAKVLLELGAE 143 (202)
T ss_dssp -------HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred -------cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
No 379
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=21.42 E-value=5.9e+02 Score=25.39 Aligned_cols=85 Identities=8% Similarity=-0.097 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCcchHHhhhhhHHHHHH
Q 010864 205 LHDAFYNWAIAISDRAKMRG--RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAIS 282 (498)
Q Consensus 205 ~~~a~~~lg~~~~~~~~~~g--~~~eA~~~~~~Al~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~ 282 (498)
++.++.|||.+-.- .- ....++++|.+|+..-++-. +-....-|..+|-.+.+.+++ .+|+.
T Consensus 261 YPmALgnLgDLEei----~pt~grp~~~~Lf~~AI~~ar~~Y--~~~hvYPYtYlgG~~~R~~~~----------~eAl~ 324 (489)
T 4gq4_A 261 YPMALGNLADLEEL----EPTPGRPDPLTLYHKGIASAKTYY--RDEHIYPYMYLAGYHCRNRNV----------REALQ 324 (489)
T ss_dssp CHHHHHHHHHHHHH----SCCTTSCCHHHHHHHHHHHHHHHS--TTCCSHHHHHHHHHHHHTTCH----------HHHHH
T ss_pred cchhhhcccCHhhc----CCCCCCCCHHHHHHHHHHHHHHhc--ccCcccceeecchHHHHhhhH----------HHHHH
Confidence 44555555554432 21 11235556666665555433 334567788889999999999 99999
Q ss_pred HHHHHHHh------cCCCHHHHHHHHHHH
Q 010864 283 KFRAAIQL------QFDFHRAIYNLGTVL 305 (498)
Q Consensus 283 ~~~~Al~l------~P~~~~a~~~Lg~~~ 305 (498)
++-.|-.. ..++.++|..+-.+.
T Consensus 325 ~wa~aa~Vi~~YnY~reDeEiYke~~eIa 353 (489)
T 4gq4_A 325 AWADTATVIQDYNYCREDEEIYKEFFEVA 353 (489)
T ss_dssp HHHHHHHHHTTSCCCTTCHHHHHHHHHHH
T ss_pred HhhhhhhhhhhcccccchHHHHHHHHHHH
Confidence 99888654 455666665554443
No 380
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=20.88 E-value=3.2e+02 Score=26.75 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh
Q 010864 158 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL 201 (498)
Q Consensus 158 ~~a~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l 201 (498)
..+++|+|.+|.+.+...... ..+.|+..|++|-.+
T Consensus 123 a~vLfNlaal~s~~A~~~~r~--------~lk~A~~~fq~AAG~ 158 (392)
T 1zb1_A 123 SCTLFNIAVIFTQIARENINE--------DYKNSIANLTKAFSC 158 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchH--------HHHHHHHHHHHHHHH
Confidence 456788888888777632211 266666666666544
No 381
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=20.13 E-value=4.4e+02 Score=23.81 Aligned_cols=69 Identities=19% Similarity=0.053 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCcCCCCCCCCchhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010864 161 LYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--------CPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 232 (498)
Q Consensus 161 ~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--------~p~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 232 (498)
+...|..|..+..... |..+.|..+|+.|+.+ +|-......|.+..|.. .+++.++|..+
T Consensus 123 ~KMKGDYyRYlAE~~~---------g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYE---Iln~p~~Ac~l 190 (227)
T 2o8p_A 123 LKVKSDISRYKLEFGL---------CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSE---KYGEKKQVFNM 190 (227)
T ss_dssp HHHHHHHHHHHHHTTS---------SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHH---TSSCHHHHHHH
T ss_pred HHHhhhHHHHHHHHcc---------ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHH---HccCHHHHHHH
Confidence 4455666666554111 1178899999999876 45555667777777765 37999999977
Q ss_pred HHHHHHHHH
Q 010864 233 WKQATKNYE 241 (498)
Q Consensus 233 ~~~Al~~~~ 241 (498)
-++|....+
T Consensus 191 Ak~Afd~~~ 199 (227)
T 2o8p_A 191 LNSLGKILE 199 (227)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666433
No 382
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=20.06 E-value=1.8e+02 Score=25.64 Aligned_cols=35 Identities=11% Similarity=-0.162 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhcCcchHHhhhhhHHHHHHHHHHHHHhcCCCH
Q 010864 251 PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 295 (498)
Q Consensus 251 ~~a~~~lg~~l~~~g~~~~a~~~~~~~~~Ai~~~~~Al~l~P~~~ 295 (498)
...++.+|.++...++| .+|..++.+|++.-|...
T Consensus 14 v~Y~YYlGr~~~~~~~y----------~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDF----------KQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCH----------HHHHHHHHHHHHHCCHhH
Confidence 45678999999999999 999999999999987654
Done!