Citrus Sinensis ID: 010865

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Secondary Structure (PSIPRED)
ccccccccccccEEEcccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccHHccccHHHHHHcccccccccccEEEEccEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccccccEEEccccccccccHHccccccEccccccccccccccccccccEEEcccHHHccccHHccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEcccccEEcccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHHHHHHccEHHHcccccEEEEccHHHHHHHHHHHHHcHHHHcHccHHHHHHHHccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEEEccccccccccccccccccccccEEEHHHHHHHHHHHHHHHcccEEEEccccc
Coil and Loop (DISEMBL)
meswiygsegkgilysdevdssvdpftrsRKTLmaweskpsynfdinklfsdsddvenMEFMDlcftdltrkpchsnsslgtpngevgsdtnerltttpcmvtsnsfcgpesgskissSCMKSISQDSALIDlklgrlvdgrdkqcgklfkersvassahpslmakkvrttsscsqtplcqvygcnkdlssskdyhkrhkvcdvhsktpkvivngNEQRFCQQCSRFHllaefddskRSCRRRLAghnerrrkpqfnihsdrsrselpwtslqngtsfvypdmlpggilfperyepvkqikfserppyspqlavpntneqlltksslyqgnkkqhrlaipldtaltfqdssgishssgALSLLSAqsqsmpnhlsgipmarplisqVSHTHLnlgqnfvktsgttplgkyetkgfytsgmnsmdgaqmrslmvpdaghafelkvetdevsqesdffkdkncyspeqgfTVDLIQLSSHLKRVEQQrnsiqpkqhtddl
Flexible Loop (DISEMBL)
meswiygsegkgilysdevdssVDPFTRSRKTlmaweskpsynfdINKLFSDSDDVENMEFMDLCFTDLTRKPCHsnsslgtpngevgsdtneRLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFkersvassahpslmakkvrttsscsqtplCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLlaefddskrscrrrlaghnerrrkpqfnihsdrsrselpwtslqngTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQnfvktsgttplgKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVeqqrnsiqpkqhtddl
Low Complexity Region (SEG)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPEsgskissscmksisqdsALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDssgishssgalsllsaqsqsMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Disordered region (IsUnstruct)
****************************************SYNFDINKLFSDSDDVENMEFMDLCFTDLTR*********************************************************ALIDLKLGRLVDGRD*QCG*****************************TPLCQVYGCNKDLS**KDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEF***********************************WTSLQNGTSFVYPDMLPGGILFPERYEPVKQI*************************************AIPLD****************************************LISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYT*************************************FFKDKNCYSPEQGFTVDLIQL***********************
Disordered Region (DISOPRED)
***WI**SEGKGILYSDE***************MAWESKPSYNFDINKLFS**DDV*NMEFMDL*********************************************************************KLGRLVDG****************************************VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR*********************************************************************************************************************************************************************************************************************************PEQGFTVDLIQLSS*********************
Disordered Region (DISEMBL)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCG*************SISQDSALIDLKLGRLVDGRDKQCGKLFK************************QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKV**********FFKDKNCYSPEQGFTVDLIQLSSHL*******************
Disordered Region (DISPRO)
**SWIYGS*GKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPC***S****************************FC*********************LIDLKLGRLVDGR*********************************QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRR******************************************GGILFP*R***VKQIKF*******P***************************************************************************************************************SM*GAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQ*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNGTSFVYPDMLPGGILFPERYEPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	498	2.2.26 [Sep-21-2011]
Q94JW8	405	Squamosa promoter-binding	yes	no	0.604	0.743	0.395	1e-49
A2YGR5	475	Squamosa promoter-binding	N/A	no	0.267	0.28	0.529	2e-34
Q5Z818	475	Squamosa promoter-binding	yes	no	0.267	0.28	0.529	2e-34
A3A2Z8	469	Squamosa promoter-binding	no	no	0.253	0.268	0.601	2e-33
A2X0Q6	469	Squamosa promoter-binding	N/A	no	0.253	0.268	0.601	2e-33
Q8S9L0	396	Squamosa promoter-binding	no	no	0.232	0.292	0.572	1e-31
Q7XT42	360	Squamosa promoter-binding	no	no	0.176	0.244	0.636	1e-31
Q01JD1	360	Squamosa promoter-binding	N/A	no	0.176	0.244	0.636	1e-31
Q0J0K1	472	Squamosa promoter-binding	no	no	0.242	0.256	0.536	4e-31
Q8RY95	1035	Squamosa promoter-binding	no	no	0.176	0.085	0.681	4e-31

>sp|Q94JW8|SPL6_ARATH Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2

 Score =  197 bits (502), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 188/372 (50%), Gaps = 71/372 (19%)

Query: 126 QDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGC 185
           Q+   ID KL   +D        L  +    SS   +L +KK R ++ CSQ PLCQVYGC
Sbjct: 78  QELNRIDFKLRSFLD--------LGNDDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGC 129

Query: 186 NKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLA 245
           +KDLSSSKDYHKRH+VC+ HSKT  VIVNG EQRFCQQCSRFH L+EFDD KRSCRRRLA
Sbjct: 130 SKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLA 189

Query: 246 GHNERRRKPQFNIHSD------RSRSELPWTSLQNGTSFVYPDMLPGGILF----PERYE 295
           GHNERRRKP F           R+  ++        +S V P+  PG +L+     + + 
Sbjct: 190 GHNERRRKPAFYFLPGKRHKLLRTSQDVVGNKFLENSSLVLPESFPGSLLYRVIDEDDHR 249

Query: 296 PVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTFQDSSGISH 355
             + + F + P  S     P TNEQ    S  Y+     +   +   +++     +  S 
Sbjct: 250 TSRLVSFKDEPTCS---MFP-TNEQ--NSSRTYESKPAIYSTEV---SSIWDLHETAASR 300

Query: 356 SSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGF 415
           S+ ALSLLSAQSQ    HLS  P     I+Q +       QN   +S T           
Sbjct: 301 STRALSLLSAQSQ---QHLSKFPNTTFSITQPN-------QNLNHSSST----------- 339

Query: 416 YTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQL 475
                   D  QM   +  D G       +T+     S   K  +        TVDL+QL
Sbjct: 340 --------DYHQMEQPLWIDPG-------KTNSAGSSSCKGKGTS--------TVDLLQL 376

Query: 476 SSHLKRVEQQRN 487
           SSHL+R+EQQRN
Sbjct: 377 SSHLQRIEQQRN 388

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|A2YGR5|SPL12_ORYSI Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 93/134 (69%), Gaps = 1/134 (0%)

Query: 123 SISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH-PSLMAKKVRTTSSCSQTPLCQ 181
           ++S    +I LKLG+     +   G+  K  S AS    PS + KK++ +   +Q+  CQ
Sbjct: 122 AVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQ 181

Query: 182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
           V GC  DLSS+++YH++HKVC+ HSK PKVIV+G E+RFCQQCSRFH LAEFD  K+SCR
Sbjct: 182 VEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCR 241

Query: 242 RRLAGHNERRRKPQ 255
           RRL+ HN RRRKPQ
Sbjct: 242 RRLSDHNARRRKPQ 255

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q5Z818|SPL12_ORYSJ Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica GN=SPL12 PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 93/134 (69%), Gaps = 1/134 (0%)

Query: 123 SISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH-PSLMAKKVRTTSSCSQTPLCQ 181
           ++S    +I LKLG+     +   G+  K  S AS    PS + KK++ +   +Q+  CQ
Sbjct: 122 AVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQ 181

Query: 182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
           V GC  DLSS+++YH++HKVC+ HSK PKVIV+G E+RFCQQCSRFH LAEFD  K+SCR
Sbjct: 182 VEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCR 241

Query: 242 RRLAGHNERRRKPQ 255
           RRL+ HN RRRKPQ
Sbjct: 242 RRLSDHNARRRKPQ 255

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A3A2Z8|SPL3_ORYSJ Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1

 Score =  144 bits (363), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 88/128 (68%), Gaps = 2/128 (1%)

Query: 130 LIDLKLGRLVDGRDKQCGKLFKER-SVASSAHPSL-MAKKVRTTSSCSQTPLCQVYGCNK 187
           LI LKLG+     D   G+  K   S  S A PS  +AKKV+     +Q P CQV GCN 
Sbjct: 130 LIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAKKVKVAQQNTQNPHCQVEGCNV 189

Query: 188 DLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGH 247
           DLSS+K YH++H+VC+ HSKT KVIV G E+RFCQQCSRFH LAEFD  KRSCRRRL  H
Sbjct: 190 DLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDH 249

Query: 248 NERRRKPQ 255
           N RRRKPQ
Sbjct: 250 NARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2X0Q6|SPL3_ORYSI Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1

 Score =  144 bits (363), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/128 (60%), Positives = 88/128 (68%), Gaps = 2/128 (1%)

Query: 130 LIDLKLGRLVDGRDKQCGKLFKER-SVASSAHPSL-MAKKVRTTSSCSQTPLCQVYGCNK 187
           LI LKLG+     D   G+  K   S  S A PS  +AKKV+     +Q P CQV GCN 
Sbjct: 130 LIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAKKVKVAQQNTQNPHCQVEGCNV 189

Query: 188 DLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGH 247
           DLSS+K YH++H+VC+ HSKT KVIV G E+RFCQQCSRFH LAEFD  KRSCRRRL  H
Sbjct: 190 DLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDH 249

Query: 248 NERRRKPQ 255
           N RRRKPQ
Sbjct: 250 NARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8S9L0|SPL10_ARATH Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 8/124 (6%)

Query: 161 PSLMAKKVRTTSSCSQT---PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNE 217
           PS++A+K   T SC Q+   P CQ+ GC  DLSSSKDYH++H+VC+ HSK PKV+V+G E
Sbjct: 156 PSVVARK--KTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLE 213

Query: 218 QRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ--FNIHSDRSRSELPWTS-LQN 274
           +RFCQQCSRFH ++EFD+ KRSCR+RL+ HN RRRKPQ  F ++S+R       TS L N
Sbjct: 214 RRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQGVFPLNSERVFDRRQHTSMLWN 273

Query: 275 GTSF 278
           G S 
Sbjct: 274 GLSL 277

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XT42|SPL7_ORYSJ Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query: 166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
           +K +  ++    P CQV GC+  L   K+YH+RHKVC+VH+K P+V+V+G EQRFCQQCS
Sbjct: 94  RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCS 153

Query: 226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
           RFH+LAEFDD+K+SCRRRLAGHNERRR+
Sbjct: 154 RFHVLAEFDDAKKSCRRRLAGHNERRRR 181

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q01JD1|SPL7_ORYSI Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica GN=SPL7 PE=2 SV=1

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query: 166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
           +K +  ++    P CQV GC+  L   K+YH+RHKVC+VH+K P+V+V+G EQRFCQQCS
Sbjct: 94  RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCS 153

Query: 226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
           RFH+LAEFDD+K+SCRRRLAGHNERRR+
Sbjct: 154 RFHVLAEFDDAKKSCRRRLAGHNERRRR 181

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q0J0K1|SPL18_ORYSJ Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica GN=SPL18 PE=2 SV=1

 Score =  136 bits (343), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 84/136 (61%), Gaps = 15/136 (11%)

Query: 176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDD 235
           Q P C V GC  DLS  +DYH+RHKVC+ HSKTP V+V+G E RFCQQCSRFHLL EFD+
Sbjct: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170

Query: 236 SKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNGTSFVYPDMLPGGILFPERYE 295
           +KRSCR+RL GHN RRRKPQ +  S  S     + + Q GT F            P R E
Sbjct: 171 AKRSCRKRLDGHNRRRRKPQADSMSSGS-----FMTSQQGTRFAS--------FTPPRPE 217

Query: 296 PVKQ--IKFSERPPYS 309
           P     IK  E P YS
Sbjct: 218 PSWPGIIKSEETPYYS 233

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3

 Score =  136 bits (342), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 69/88 (78%)

Query: 166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
           KKVR+ S     P+CQV  C +DLS +KDYH+RHKVC+VHSK  K +V    QRFCQQCS
Sbjct: 106 KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCS 165

Query: 226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
           RFHLL+EFD+ KRSCRRRLAGHN RRRK
Sbjct: 166 RFHLLSEFDEGKRSCRRRLAGHNRRRRK 193

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
359472829	611	PREDICTED: squamosa promoter-binding-lik	0.997	0.813	0.513	1e-125
255541980	512	LIGULELESS1 protein, putative [Ricinus c	0.943	0.917	0.495	1e-119
297738116	498	unnamed protein product [Vitis vinifera]	0.915	0.915	0.519	1e-114
224108868	600	hypothetical protein POPTRDRAFT_769914 [	0.963	0.8	0.484	1e-112
356502645	482	PREDICTED: squamosa promoter-binding-lik	0.907	0.937	0.429	2e-88
356498035	482	PREDICTED: squamosa promoter-binding-lik	0.917	0.948	0.410	7e-87
225456548	557	PREDICTED: squamosa promoter-binding-lik	0.981	0.877	0.430	8e-85
449441121	550	PREDICTED: uncharacterized protein LOC10	0.967	0.876	0.392	2e-81
449439349	548	PREDICTED: uncharacterized protein LOC10	0.959	0.872	0.398	3e-75
255547135	557	LIGULELESS1 protein, putative [Ricinus c	0.973	0.870	0.396	6e-74

>gi|359472829|ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/520 (51%), Positives = 334/520 (64%), Gaps = 23/520 (4%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW +  E K  LYS+E+D + D   RSRK L  W+ +  +NF+ + L  D D VE+ME
Sbjct: 87  MESWSHALEKKMFLYSEEMDLTTDAVGRSRKLLTGWDMRTPFNFENDGLVLDRDAVESME 146

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNS-FCGPESGSKISSS 119
           FM+L   DL RK   SN S+G  +GE+G ++++R+ +   MVTSN  F G ES S++SSS
Sbjct: 147 FMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVTSNPIFGGEESSSRLSSS 206

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            M+S SQDS++IDLKLGRL D  D +  +  KE SV SS   S+ AK+ RTTS CSQTPL
Sbjct: 207 FMESNSQDSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLASSMPAKRARTTSVCSQTPL 266

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV+GCN DLSSSKDYHKRHKVCDVHSKTPKVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 267 CQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 326

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSR--------SELPWTSLQNGTSFVYPDMLPGGILFP 291
           CR+RLAGHNERRRKPQ + HS + +        + +  TSL     FV+ D+LPG +  P
Sbjct: 327 CRKRLAGHNERRRKPQLDTHSGKPQKLLQSYPGTRILGTSLAKRPPFVFQDILPGSVYCP 386

Query: 292 ERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQ---------HRLA 338
           + Y    P + IK  + P YS QL +P  + QL  KS L+  G ++Q             
Sbjct: 387 DGYGQANPSRSIKLEKEPIYSSQLVIP-ISGQLPPKSFLHLYGTERQCPPGFLSSGTEDC 445

Query: 339 IPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNF 398
                A T Q+  G+S S+ ALSLLSAQSQ + NHL GIPMA P   Q  H H +   N 
Sbjct: 446 TGFYPASTVQELPGVSKSNCALSLLSAQSQDLSNHLMGIPMANPPTVQGCHAHYSAVHNS 505

Query: 399 VKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKD 458
            K  G + L K+ + G Y+S MNS++ AQM  +M+PD G+A   +V T+   Q SDF   
Sbjct: 506 DKPIGMSSLEKFASNGSYSSRMNSVEVAQMGPVMLPDGGNAVSFEVRTNRNFQGSDFLNA 565

Query: 459 KNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 498
           K  +S E+  TVDL+QLSSHLKRVE QRN +  KQ  DD 
Sbjct: 566 KYSHSSEREPTVDLLQLSSHLKRVEWQRNYMHVKQENDDF 605

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541980|ref|XP_002512054.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223549234|gb|EEF50723.1| LIGULELESS1 protein, putative [Ricinus communis]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 262/529 (49%), Positives = 325/529 (61%), Gaps = 59/529 (11%)

Query: 1   MESWIYG-SEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENM 59
           M+SW +  +EGK + +SDE+D S D F RSRKTL  W               D + VENM
Sbjct: 1   MDSWRFTTAEGKSLFFSDEIDVSTDSFGRSRKTLTGW---------------DGESVENM 45

Query: 60  EFMDLCFTDLTRKPCHSNSSLG----TPNGEVGSDTNE---RLTTTPCMVTSNSFCGPES 112
           EF+DL F+++ ++  +  S+ G      +GEV  D +     L++  CM+ SNS    ES
Sbjct: 46  EFIDLGFSEMHKRQFYGTSNTGFGILGSSGEVNFDASSNKIELSSPSCMIASNS--SLES 103

Query: 113 GSKISSSCMKSISQDSA-LIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTT 171
           GS  S+S M++ S DS+ LIDLKLGRL DG+D    K  KERSV SS  P+  AK+ RT 
Sbjct: 104 GSNHSNSVMEANSHDSSSLIDLKLGRLGDGKDVDNSKFLKERSVVSSVTPTFQAKRARTM 163

Query: 172 SSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLA 231
           +S +QTP CQVYGCNKDLSS KDYHKRHKVC+VHSKTPKVIVNG EQRFCQQCSRFHLL 
Sbjct: 164 NSRTQTPFCQVYGCNKDLSSLKDYHKRHKVCEVHSKTPKVIVNGVEQRFCQQCSRFHLLV 223

Query: 232 EFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSR--------SELPWTSLQNGTSFVYPDM 283
           EFDD KRSCR+RLAGHNERRRKPQF   S R          ++   TSL    SF++P+M
Sbjct: 224 EFDDGKRSCRKRLAGHNERRRKPQFGALSGRPHKLLQAYQGTKFLGTSLPKRASFLFPNM 283

Query: 284 LPGGILFPERYEPV---KQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQHRLAI 339
            PGGIL+PE YE     + +K  E+  Y        TN QLL KS L+  GN  Q+   I
Sbjct: 284 RPGGILYPEIYEQANCCRPVKLEEKSCY-------GTNSQLLQKSFLHLHGNGIQNTSGI 336

Query: 340 P---------LDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHT 390
                        +    + +G+SHSS ALSLLSA+SQ + +H +GI MARPLISQV  +
Sbjct: 337 SPPASEDFTVFSASSNIHELAGVSHSSCALSLLSAESQDL-SHSAGIIMARPLISQVGRS 395

Query: 391 HLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEV- 449
           H  LG  F   S      KY    F +SGM+S+    M  LM   AGHA + ++E+DE  
Sbjct: 396 HHILG--FSDKSSLGSSEKYVGDIFQSSGMSSLKTNHMGPLMGSCAGHATDGQIESDEYL 453

Query: 450 -SQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 497
            +Q  DF  DK C S E G TVDL+QLSSHL RVEQQRNS+Q K   ++
Sbjct: 454 QNQGPDFVSDKFCISAENGTTVDLLQLSSHLHRVEQQRNSMQVKHELEE 502

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738116|emb|CBI27317.3| unnamed protein product [Vitis vinifera]

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 249/479 (51%), Positives = 310/479 (64%), Gaps = 23/479 (4%)

Query: 42  YNFDINKLFSDSDDVENMEFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCM 101
           +NF+ + L  D D VE+MEFM+L   DL RK   SN S+G  +GE+G ++++R+ +   M
Sbjct: 15  FNFENDGLVLDRDAVESMEFMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNM 74

Query: 102 VTSNS-FCGPESGSKISSSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAH 160
           VTSN  F G ES S++SSS M+S SQDS++IDLKLGRL D  D +  +  KE SV SS  
Sbjct: 75  VTSNPIFGGEESSSRLSSSFMESNSQDSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLA 134

Query: 161 PSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRF 220
            S+ AK+ RTTS CSQTPLCQV+GCN DLSSSKDYHKRHKVCDVHSKTPKVIVNG EQRF
Sbjct: 135 SSMPAKRARTTSVCSQTPLCQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRF 194

Query: 221 CQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSR--------SELPWTSL 272
           CQQCSRFHLLAEFDD KRSCR+RLAGHNERRRKPQ + HS + +        + +  TSL
Sbjct: 195 CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQLDTHSGKPQKLLQSYPGTRILGTSL 254

Query: 273 QNGTSFVYPDMLPGGILFPERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY- 328
                FV+ D+LPG +  P+ Y    P + IK  + P YS QL +P  + QL  KS L+ 
Sbjct: 255 AKRPPFVFQDILPGSVYCPDGYGQANPSRSIKLEKEPIYSSQLVIP-ISGQLPPKSFLHL 313

Query: 329 QGNKKQ---------HRLAIPLDTALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPM 379
            G ++Q                  A T Q+  G+S S+ ALSLLSAQSQ + NHL GIPM
Sbjct: 314 YGTERQCPPGFLSSGTEDCTGFYPASTVQELPGVSKSNCALSLLSAQSQDLSNHLMGIPM 373

Query: 380 ARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHA 439
           A P   Q  H H +   N  K  G + L K+ + G Y+S MNS++ AQM  +M+PD G+A
Sbjct: 374 ANPPTVQGCHAHYSAVHNSDKPIGMSSLEKFASNGSYSSRMNSVEVAQMGPVMLPDGGNA 433

Query: 440 FELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 498
              +V T+   Q SDF   K  +S E+  TVDL+QLSSHLKRVE QRN +  KQ  DD 
Sbjct: 434 VSFEVRTNRNFQGSDFLNAKYSHSSEREPTVDLLQLSSHLKRVEWQRNYMHVKQENDDF 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108868|ref|XP_002314996.1| hypothetical protein POPTRDRAFT_769914 [Populus trichocarpa] gi|222864036|gb|EEF01167.1| hypothetical protein POPTRDRAFT_769914 [Populus trichocarpa]

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 253/522 (48%), Positives = 313/522 (59%), Gaps = 42/522 (8%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           M+ W Y SEGKG+L+SDE+D S D FTRSRK  +                 D++  E+ E
Sbjct: 28  MDFWSYASEGKGLLFSDEIDLSGDAFTRSRKASIG---------------CDTEAAESAE 72

Query: 61  FMDLCFTDLTRKPCH-SNSSLGTPNGE-VGSDTNERLTTTP-CMVTSNSFCGPESGSKIS 117
            +DL F+++ RKP H S +  G   G  VG D+++ +  +P CM+ SNS    ES S  S
Sbjct: 73  SLDLGFSEIPRKPFHGSKTGAGMFGGSCVGIDSSKLVVGSPNCMIASNS--SMESRSNHS 130

Query: 118 SSCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQT 177
           +S M+S SQDS+L DLKLGRL D  D Q  +  KER + SSA P+  AK+    S   + 
Sbjct: 131 NSLMESNSQDSSLFDLKLGRLADCIDAQNSRFSKERFLLSSASPTTQAKRAPMASLRPRI 190

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
             CQVY CNKDLSSSKDYHKRHKVC+VH+KTP+VIVNGNEQRFCQQCSRFHLL EFDD K
Sbjct: 191 SFCQVYDCNKDLSSSKDYHKRHKVCEVHTKTPQVIVNGNEQRFCQQCSRFHLLVEFDDGK 250

Query: 238 RSCRRRLAGHNERRRKPQFNIHSDRSRSEL-PW-------TSLQNGTSFVYPDMLPGGIL 289
           RSCR+RLAGHNERRRKPQF   S +    L P+       TSL   TSF++P+MLPGG  
Sbjct: 251 RSCRKRLAGHNERRRKPQFGTLSVKPHKLLHPFQSTKFLGTSLAKRTSFLFPNMLPGGTF 310

Query: 290 FPERYEP---VKQIKFSERPPYSPQLAVPNTNEQLLTKSSLY-QGNKKQHRLAI-PLD-- 342
            P+ YE     K +K  E   YS   A+P  N QLL +S L+  GN+ Q    I PLD  
Sbjct: 311 CPQSYEEDNWRKHVKLEENSIYSSPSAIPIRNGQLLPRSFLHLHGNRIQKTCGISPLDTE 370

Query: 343 ------TALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ 396
                 TA T  + +G+SHSS ALSLLSA      +H +G  M RPL+SQ       LG 
Sbjct: 371 DLTISNTATTINELAGVSHSSCALSLLSAAESQDLSHSAGNIMVRPLVSQAGGACQTLGI 430

Query: 397 NFVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFF 456
              K+ G     KY   G  + GMN ++   M    V  +GHA +LKVETD     SDF 
Sbjct: 431 A-NKSLGGGSSEKYVPIGINSFGMNFIEVDNMGPFGVSGSGHAADLKVETDGFLHHSDFL 489

Query: 457 KDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDDL 498
             K+C SP    TVD +QLSSHL+RVEQQRNS++ K   +D 
Sbjct: 490 NAKHCVSPANESTVDWLQLSSHLQRVEQQRNSMKVKHENEDF 531

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502645|ref|XP_003520128.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Glycine max]

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 224/521 (42%), Positives = 290/521 (55%), Gaps = 69/521 (13%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y  E KG L+SDE+D S+D F RSRK L+ W++K ++  + +   SD + V +ME
Sbjct: 1   MESWSYVPEEKGYLFSDEMDFSLDAFMRSRKALVEWDNKSNF-VEKDGFNSDREVVRSME 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSD-TNERLTTTPCMVTSNSFCGPE-SGSKISS 118
           F+DL F DL +K  H +  L T + E+ S+ +++R  ++P ++  +S  G E S SK  S
Sbjct: 60  FVDLGFPDLLQKSFHGSQPLETSSYELDSNNSSKRGNSSPHVIALDSSMGEEESDSKHLS 119

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           S ++S + DS+LIDLKLGRL D +     K+ KE    +S HP+ + K+ RT+S  +Q P
Sbjct: 120 SLVESKTHDSSLIDLKLGRLADCKGASSDKVAKEGFTLTSIHPTTLWKRARTSSLPAQAP 179

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
           +CQVYGCN DLSSSKDYHKRHKVCD HSKT KVIVNG EQRFCQQCSRFHLLAEFDD KR
Sbjct: 180 VCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKR 239

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRSELP--------WTSLQNGTSFVYPDMLPGGILF 290
           SCRRRLAGHNERRRKPQF+  + +    L          +SLQN   F + D+    ILF
Sbjct: 240 SCRRRLAGHNERRRKPQFDYVTGKQHKILQSYQGTKYLGSSLQNKPQFPFQDIFQSSILF 299

Query: 291 PERYEPVKQ---IKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKKQHRLAIPLDTALTF 347
           P ++    Q   +K  E   Y  QLA P T +Q                           
Sbjct: 300 PGKHAQFSQSGRVKLEEDSIYGSQLAAPVTLDQ--------------------------- 332

Query: 348 QDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLI----------SQVSHTHLNLGQN 397
                   SS ALSLLS QSQ    H +G P+A P +          S+VS   L +   
Sbjct: 333 ------ESSSCALSLLSDQSQYPSCHAAGNPLASPQVFSGIRIPDRDSRVSKKPLRI--- 383

Query: 398 FVKTSGTTPLGKYETKGFYTSGMNSMDGAQMRSLMV-PDAGHAFELKVETDEVSQESDFF 456
                  +P  K      +     S +  + RS       GHA E+    D++ Q S+ F
Sbjct: 384 -------SPADKLAPNESFPCDTISKEVIKNRSAATFSSVGHALEVH-NGDDICQPSELF 435

Query: 457 KDKNCYSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 497
             K+  S E   TVDL QLSSHL+RVEQQRNS+  K   +D
Sbjct: 436 SIKHSLSSEHAATVDLFQLSSHLQRVEQQRNSVLVKWENED 476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498035|ref|XP_003517860.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Glycine max]

 Score =  327 bits (839), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 212/516 (41%), Positives = 286/516 (55%), Gaps = 59/516 (11%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y  E KG L+SDE++ S+D F RSRK L+ W++K ++  + +   SD + V++ME
Sbjct: 1   MESWSYVPEEKGYLFSDEMEFSLDAFMRSRKALVEWDNKSNF-VERDGFNSDREVVKSME 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERL--TTTPCMVTSNSFCGPESGSKISS 118
           F+DL F DL +K  H +  L T + E+ S+ + +   ++T  +   +S    ES SK  S
Sbjct: 60  FVDLGFPDLLQKSFHGSLPLETSSYELDSNNSSKRGNSSTHVIALDSSMGEEESNSKHLS 119

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           S ++S +QDS+LIDLKLGRL D +     K+ KE    +S HP+ ++K+ RT+S  +Q P
Sbjct: 120 SLVESKTQDSSLIDLKLGRLADCKGASSDKVEKEGFTLTSIHPTTLSKRARTSSLPAQAP 179

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
           +CQVYGCN DLSSSKDYHKRHKVCD HSKT KVIVNG EQRFCQQCSRFHLL EFDD KR
Sbjct: 180 VCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKR 239

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRSELP--------WTSLQNGTSFVYPDMLPGGILF 290
           SCRRRLAGHNERRRKPQF+  + +    L          +SLQN   F + D+    ILF
Sbjct: 240 SCRRRLAGHNERRRKPQFDYMTGKQHKILQSYQGTKYLGSSLQNKPMFPFQDIFQSSILF 299

Query: 291 PERYEPVKQ---IKFSERPPYSPQLAVPNTNEQLLTKSSLYQGNKK-----QHRLAIPLD 342
           P ++  + Q   +K  E   YS QL  P T +Q  +  +L   + +      H    PL 
Sbjct: 300 PGKHAQISQSGRVKLEEDSIYSSQLTAPITLDQESSSCALSLLSDQSQYLSHHAACNPLT 359

Query: 343 TALTFQDSSGISHSSGALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTS 402
           +   F   SGI                +PN             Q+S T L +        
Sbjct: 360 SHRVF---SGIC---------------IPNR----------DGQISETPLRI-------- 383

Query: 403 GTTPLGKYETKGFYTSGMNSMDGAQMRSLMV-PDAGHAFELKVETDEVSQESDFFKDKNC 461
             +   K+     +     S +  + RS     + GHA  +    D++ Q S+    K+ 
Sbjct: 384 --SSADKHAPNESFPCNTTSKEVIKNRSAATFSNTGHALRVH-HGDDICQPSELLDVKHH 440

Query: 462 YSPEQGFTVDLIQLSSHLKRVEQQRNSIQPKQHTDD 497
           +S E   TVDL QLSSHL+RVEQQRNS+  K   +D
Sbjct: 441 FSSEHAATVDLFQLSSHLQRVEQQRNSVLVKWENED 476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456548|ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  320 bits (821), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 240/557 (43%), Positives = 292/557 (52%), Gaps = 68/557 (12%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           M SW Y S+ K  + SD  D   +   RS+   M WE K    +  + L S    ++N  
Sbjct: 1   MGSWSYVSQEKEFV-SDATDLQPNSSARSKNVFMGWELKTPCGYGNSILVSSQQVIQNQG 59

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFC-GPESGSKISSS 119
           F +    ++ RK    NS      G+ G    + +     MV+ N F    ES SK+SSS
Sbjct: 60  FGEFGIPEMVRKQLPDNSIRDVSCGKGG----DGIMVNSIMVSPNVFPRDDESSSKLSSS 115

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            M+S SQDS LIDLKLGR  D  D Q  K  K      SA  S  AK+VR     SQT  
Sbjct: 116 VMESNSQDSLLIDLKLGRFADHSDSQNCKPSKANPSLPSAESSTPAKRVRAVGLNSQTAF 175

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV+GCNKDLSSSKDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 176 CQVHGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 235

Query: 240 CRRRLAGHNERRRKPQFNIHSDRSRSELPWTSLQNG----------TSFVYPDMLPGGIL 289
           CR+RLAGHNERRRKPQ  IH  R+   L   +   G           SF+  D+LP G+L
Sbjct: 236 CRKRLAGHNERRRKPQVGIHPGRAGRLLQSYNGYAGNRFQGTTLTTASFICQDILPSGLL 295

Query: 290 FPERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKS-----------SLYQGNKK-- 333
            PE+Y   +  K+IK  +   YSPQ  +P TN     KS           S +Q N    
Sbjct: 296 PPEKYGMSDWCKRIKVEDGTDYSPQSTIPITNGHPHPKSLFPTFEFEKQYSSFQDNGANT 355

Query: 334 -----QHRLAIPLDTALT-------FQDS-------------------SGISHSSGALSL 362
                +H    P D A         FQD+                   SGIS S  ALSL
Sbjct: 356 GSIFSEHNSRYPHDLADANSGPHSFFQDTSLGNEDLSVFDAGSTVQALSGISDSGRALSL 415

Query: 363 LSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTP---LGKYETKGFYTSG 419
           LS+QSQ+  +H SGIPM  PLI    H H N+ Q   K  G +P   + +   K F +SG
Sbjct: 416 LSSQSQNSSSHSSGIPMIHPLIMPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNK-FLSSG 474

Query: 420 MNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLSSHL 479
           MNS +G  +  +++ D       +V TD + Q SDF   K+C   E G T+DL+QLSS L
Sbjct: 475 MNSAEGNHLGPILISDCSEPVNFEV-TDGIFQGSDFVNTKDCLPCETGPTIDLLQLSSQL 533

Query: 480 KRVEQQRNSIQPKQHTD 496
            RVE QR SI  KQ  D
Sbjct: 534 HRVEHQRQSIHVKQEND 550

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441121|ref|XP_004138332.1| PREDICTED: uncharacterized protein LOC101221286 [Cucumis sativus]

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 218/556 (39%), Positives = 301/556 (54%), Gaps = 74/556 (13%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENME 60
           MESW Y SEGKG + SDE++S      R++ +L+ WE K   +F  + +   S  V+N  
Sbjct: 1   MESWSYVSEGKGCM-SDEMNSPTSSLARNKDSLLGWEFKNPCSFG-STMLPTSQQVDNQG 58

Query: 61  FMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGP-ESGSKISSS 119
           F +L F ++  K    NS     + +V      R    P M +S +F G  ES SK+SSS
Sbjct: 59  FGELVFPEMIGKQLPDNSVCDILSSKV---VGGRFLN-PAMNSSIAFLGEDESTSKLSSS 114

Query: 120 CMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTPL 179
            + S S+DS+ IDLKLGR  D RD    K FK   + SS+  S+ +K+VR +   SQT  
Sbjct: 115 IVDSSSRDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYF 174

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQVYGCNKDLSS KDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KRS
Sbjct: 175 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 234

Query: 240 CRRRLAGHNERRRKPQFNIHSDRS--------RSELPWTSLQNGTSFVYPDMLPGGILFP 291
           CR+RLAGHNERRRKPQ  I+S R+         S L  T+L   TSF+  ++LP G+L P
Sbjct: 235 CRKRLAGHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTAL-TATSFICQEILPNGLLHP 293

Query: 292 ERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKS----------------------- 325
           E+Y   +  + +K  ++  Y P  AV   +  L +KS                       
Sbjct: 294 EKYGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASA 353

Query: 326 -SLYQGNKKQHRLAI---------------------PLDTALTFQDSSGISHSSGALSLL 363
            ++++ N  Q+ L++                      + +A +    SG+S S  ALSLL
Sbjct: 354 TNIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLL 413

Query: 364 SAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ--NFVKTSGTTPLGKYETKGFYTSGMN 421
           S+Q+Q+   H SGIP+ RPL+      H ++ Q    +    +       +  F +SG+N
Sbjct: 414 SSQTQNSSTHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLN 473

Query: 422 SMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSP-EQGFTVDLIQLSSHLK 480
           + +G  +  +  P+   A   ++        +  F   N   P E G T+DL+QLSS L+
Sbjct: 474 TSEGCTLGPISTPETSDAVNFEI-------SNRIFHGSNLADPGEGGPTIDLLQLSSQLQ 526

Query: 481 RVEQQRNSIQPKQHTD 496
           RVE QR ++Q KQ ++
Sbjct: 527 RVEHQRQAMQVKQESN 542

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439349|ref|XP_004137448.1| PREDICTED: uncharacterized protein LOC101206747 [Cucumis sativus] gi|449486905|ref|XP_004157437.1| PREDICTED: uncharacterized protein LOC101225600 [Cucumis sativus]

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 222/557 (39%), Positives = 293/557 (52%), Gaps = 79/557 (14%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNFDINKLF-SDSDDVENM 59
           MESW YGS+GKG L SDE++SS +   RS+ +L+ WE K   +F  N L  S +  VEN 
Sbjct: 1   MESWNYGSQGKGFL-SDEMNSSTNSPLRSKYSLLGWEFKNPCSFGDNMLLTSGAQHVENQ 59

Query: 60  EFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPE-SGSKISS 118
            F +L F  +  K    +S  G  N +     N  L     + TS+   G E S SK+S 
Sbjct: 60  SFGELEFPQMVGKQLPDDSVSGVLNTKTDGGRNLNLV----LPTSHPLHGEEESTSKLSG 115

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           S + S ++DS+LIDLKLGR +D  D    K  K  +++SS   S   KK+R+     QT 
Sbjct: 116 SIVDSNNRDSSLIDLKLGRFIDQGDAHSSKYSKRAAISSSTESSTSQKKMRSQGVNFQTA 175

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
            CQVYGCNKDLSSSKDYHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLL EFDD KR
Sbjct: 176 FCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKR 235

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRSRSEL-PWTSLQN---------GTSFVYPDMLPGGI 288
           SCR+RLAGHNERRRKPQ + HS R++  L P+  + +          TSF+  D+L  G+
Sbjct: 236 SCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGIGDSRFQEKTLTATSFICKDILSSGL 295

Query: 289 LFPERY---EPVKQIKFSERPPYSPQLAVPNTNEQLLTKSSL-----------YQGN--- 331
            +PE+    +  K++K   +  Y+   A   +N  L  KS L           +Q N   
Sbjct: 296 YYPEKLGENDWCKRVKVEGKSDYNSISATSLSNRHLNVKSPLLPYDFEVQIPPFQENGTS 355

Query: 332 -------------KKQHRLAIP--------------------LDTALTFQDSSGISHSSG 358
                        +  H +  P                     D A T Q  SGI  S  
Sbjct: 356 TAPTVNMLSETTCQYSHNVGGPHIDTHPLFHQTTLSSEDFGVYDAASTIQGLSGIPDSGC 415

Query: 359 ALSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQNFVKTSGTTPLGKYETKGFYTS 418
           ALSLLS+QSQS  NH S + + R  I   S ++ ++ +   K  G +P  +  + G  + 
Sbjct: 416 ALSLLSSQSQSASNHPSIVHIPRAFIMSESQSNYSMSELSEKLMGVSP--QASSTGITSK 473

Query: 419 GMNSMDGAQMRSLMVPDAGHA-----FELKVETDEVSQESDFFKDKNCYSPEQGFTVDLI 473
             + M  AQM S  +P  G +     F++      V   S     K   S E+  T+DL+
Sbjct: 474 FASGMSEAQMGS--IPTCGSSDRTVTFQIP---GRVLHRSGLANPKANISYERTPTIDLL 528

Query: 474 QLSSHLKRVEQQRNSIQ 490
           QLSS L+RVE QR+S+Q
Sbjct: 529 QLSSQLQRVEHQRHSMQ 545

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547135|ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223546229|gb|EEF47731.1| LIGULELESS1 protein, putative [Ricinus communis]

 Score =  284 bits (727), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 222/560 (39%), Positives = 300/560 (53%), Gaps = 75/560 (13%)

Query: 1   MESWIYGSEGKGILYSDEVDSSVDPFTRSRKTLMAWESKPSYNF-DINKLFSDSDDVENM 59
           M+SW Y S GKG + S+E  SS D   +S+  LM W+ K +  F + N + +    +EN 
Sbjct: 1   MQSWNYVSGGKGFV-SNETASSSDSIAKSKNVLMGWDLKTACGFGNNNVVVAGQQAIENH 59

Query: 60  EFMDLCFTDLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSF-CGPESGSKISS 118
            F +L + +L  K    NS        + S+ +   +    MV  N F    ES S++S 
Sbjct: 60  CFGELNYQELMGKQLPDNS----IRNALSSEADGGKSINHFMVNMNVFSLEHESTSRLSR 115

Query: 119 SCMKSISQDSALIDLKLGRLVDGRDKQCGKLFKERSVASSAHPSLMAKKVRTTSSCSQTP 178
           + ++S S+DS+ IDLKLGR  D  +    ++ K  SV SS+  S   K++R   + S   
Sbjct: 116 TVVESNSRDSSFIDLKLGRFGDPTEGHNSRISKGASVMSSSESSTPPKRLRVGVN-SHPA 174

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
            CQVYGCNKDLSSSK+YHKRHKVC+VHSKT KVIVNG EQRFCQQCSRFHLLAEFDD KR
Sbjct: 175 HCQVYGCNKDLSSSKEYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKR 234

Query: 239 SCRRRLAGHNERRRKPQFNIHSDRS-----------RSELPWTSLQNGTSFVYPDMLPGG 287
           SCR+RLAGHNERRRKPQ   HS R+            S    T+L   TSF+  D+LPGG
Sbjct: 235 SCRKRLAGHNERRRKPQVGPHSGRTGKLLQSYNGIDTSRFHGTAL---TSFICQDILPGG 291

Query: 288 ILFPERY----------------EPVKQIKFSERPPYSPQLAVPNTNEQLL--------- 322
            + P+RY                 P+  I  S   P+S  L   N  +++          
Sbjct: 292 PMHPKRYGTDNWCRQIKVEDGYFNPLSSIPVSSGHPHSKSLFPSNNLDKVFLACHGNEAT 351

Query: 323 --TKSSLYQG-NKKQHRLAI--------------------PLDTALTFQDSSGISHSSGA 359
             T S+L +  N+  H L                        D A   Q  SGI++S  A
Sbjct: 352 TATGSTLSESTNRYPHDLGGSISSSQSLIQDASLGQADFSAFDAASNVQGVSGITNSGSA 411

Query: 360 LSLLSAQSQSMPNHLSGIPMARPLISQVSHTHLNLGQ---NFVKTSGTTPLGKYETKGFY 416
           LSLLS+QS ++ +H SGI MA PL+     +H ++ Q     V  S     G  + K F 
Sbjct: 412 LSLLSSQSHNLSSHSSGISMACPLVLPGRSSHYSVSQVSEKLVGISSQASAGAMQNK-FS 470

Query: 417 TSGMNSMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLS 476
           +SG +S +G+++ S+++ D   A    V  D + Q S+F   K+C S E G T+DL+QLS
Sbjct: 471 SSGTSSAEGSRLGSILLSDGSDAINF-VIADGMYQGSNFMNAKDCLSCEDGTTIDLLQLS 529

Query: 477 SHLKRVEQQRNSIQPKQHTD 496
           S L+RVE+Q+ S+Q KQ  D
Sbjct: 530 SQLERVERQKQSMQVKQEND 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
TAIR|locus:2026428	405	AT1G69170 [Arabidopsis thalian	0.317	0.390	0.551	2.3e-53
TAIR|locus:2016014	396	SPL10 "squamosa promoter bindi	0.230	0.290	0.577	5.2e-33
TAIR|locus:2169248	419	SPL2 "squamosa promoter bindin	0.269	0.319	0.468	9.8e-32
TAIR|locus:2159717	359	SPL13A "SQUAMOSA PROMOTER-BIND	0.248	0.345	0.529	1.3e-31
TAIR|locus:2832472	359	SPL13B "SQUAMOSA PROMOTER-BIND	0.248	0.345	0.529	1.3e-31
TAIR|locus:2015999	393	SPL11 "squamosa promoter-like	0.289	0.366	0.48	1.1e-30
TAIR|locus:2059974	375	SPL9 "squamosa promoter bindin	0.198	0.264	0.643	1e-29
TAIR|locus:2095793	354	SPL15 "squamosa promoter bindi	0.218	0.307	0.577	1.9e-28
TAIR|locus:2037355	1035	SPL14 "squamosa promoter bindi	0.176	0.085	0.681	4.6e-28
TAIR|locus:2057656	131	SPL3 "squamosa promoter bindin	0.176	0.671	0.613	2.2e-27

TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
 Identities = 97/176 (55%), Positives = 117/176 (66%)

Query:   157 SSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGN 216
             SS   +L +KK R ++ CSQ PLCQVYGC+KDLSSSKDYHKRH+VC+ HSKT  VIVNG 
Sbjct:   101 SSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGL 160

Query:   217 EQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFNIHSDRSRSELPWTS----- 271
             EQRFCQQCSRFH L+EFDD KRSCRRRLAGHNERRRKP F     + R +L  TS     
Sbjct:   161 EQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLPGK-RHKLLRTSQDVVG 219

Query:   272 ---LQNGTSFVYPDMLPGGILF----PERYEPVKQIKFSERPPYSPQLAVPNTNEQ 320
                L+N +S V P+  PG +L+     + +   + + F + P  S     P TNEQ
Sbjct:   220 NKFLEN-SSLVLPESFPGSLLYRVIDEDDHRTSRLVSFKDEPTCS---MFP-TNEQ 270

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2016014 SPL10 "squamosa promoter binding protein-like 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 71/123 (57%), Positives = 91/123 (73%)

Query:   161 PSLMAKKVRTTSSCSQT---PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNE 217
             PS++A+K   T SC Q+   P CQ+ GC  DLSSSKDYH++H+VC+ HSK PKV+V+G E
Sbjct:   156 PSVVARK--KTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLE 213

Query:   218 QRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ--FNIHSDRSRSELPWTS-LQN 274
             +RFCQQCSRFH ++EFD+ KRSCR+RL+ HN RRRKPQ  F ++S+R       TS L N
Sbjct:   214 RRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQGVFPLNSERVFDRRQHTSMLWN 273

Query:   275 GTS 277
             G S
Sbjct:   274 GLS 276

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010358 "leaf shaping" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2169248 SPL2 "squamosa promoter binding protein-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/145 (46%), Positives = 94/145 (64%)

Query:   156 ASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNG 215
             +SS  P    KK ++     QTP CQV GCN DLSS+KDYH++H++C+ HSK PKV+V+G
Sbjct:   148 SSSVSP---VKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSG 204

Query:   216 NEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ-FNIHSDRSRSELPWTSL-- 272
              E+RFCQQCSRFH L+EFD+ KRSCRRRL+ HN RRRKP     +  + + +  W     
Sbjct:   205 VERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKPNPGRTYDGKPQVDFVWNRFAL 264

Query:   273 ---QNGTSFVYPDM--LPGGILFPE 292
                ++   F++P    +P  +L P+
Sbjct:   265 IHPRSEEKFIWPSSKHVPSRVLMPQ 289

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/134 (52%), Positives = 90/134 (67%)

Query:   132 DLKLGRLVD------GRDKQCGKL--FKERSVAS-SAHPSLMAKKVRTTS-SCSQTPLCQ 181
             DLKLGR +       G  +Q   L  +K+ ++A      S  +K+ R      +Q P+C 
Sbjct:    43 DLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICL 102

Query:   182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
             V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+ KRSCR
Sbjct:   103 VDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCR 162

Query:   242 RRLAGHNERRRKPQ 255
             +RL GHN RRRKPQ
Sbjct:   163 KRLDGHNRRRRKPQ 176

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/134 (52%), Positives = 90/134 (67%)

Query:   132 DLKLGRLVD------GRDKQCGKL--FKERSVAS-SAHPSLMAKKVRTTS-SCSQTPLCQ 181
             DLKLGR +       G  +Q   L  +K+ ++A      S  +K+ R      +Q P+C 
Sbjct:    43 DLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICL 102

Query:   182 VYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCR 241
             V GC+ D S+ ++YHKRHKVCDVHSKTP V +NG++QRFCQQCSRFH L EFD+ KRSCR
Sbjct:   103 VDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCR 162

Query:   242 RRLAGHNERRRKPQ 255
             +RL GHN RRRKPQ
Sbjct:   163 KRLDGHNRRRRKPQ 176

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2015999 SPL11 "squamosa promoter-like 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 72/150 (48%), Positives = 96/150 (64%)

Query:   133 LKLGRLVDGRDKQCGKLFKERSVASSA--HPSLMAKKVRTTSSCSQTPLCQVYGCNKDLS 190
             LKLG+     ++  G+   E S  S     PS++A K +        P CQ+ GC  DLS
Sbjct:   127 LKLGKRTYS-EEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLS 185

Query:   191 SSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNER 250
             S+K YH++HKVC+ HSK PKV V+G E+RFCQQCSRFH ++EFD+ KRSCR+RL+ HN R
Sbjct:   186 SAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNAR 245

Query:   251 RRKPQ--FNIHSDRSRSELPWTS-LQNGTS 277
             RRKPQ  F+++ +R       T+ L NG S
Sbjct:   246 RRKPQGVFSMNPERVYDRRQHTNMLWNGVS 275

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2059974 SPL9 "squamosa promoter binding protein-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 65/101 (64%), Positives = 73/101 (72%)

Query:   157 SSAHPSLMAKKVRTTSS--CSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVN 214
             SS+      ++VR   S    Q P CQV GC  DL+++K Y+ RH+VC VHSKTPKV V 
Sbjct:    49 SSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVA 108

Query:   215 GNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ 255
             G EQRFCQQCSRFH L EFD  KRSCRRRLAGHNERRRKPQ
Sbjct:   109 GIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQ 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0048366 "leaf development" evidence=IMP;IDA

GO:2000025 "regulation of leaf formation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2095793 SPL15 "squamosa promoter binding protein-like 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 63/109 (57%), Positives = 72/109 (66%)

Query:   147 GKLFKERSVASSAHPSLMAKKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHS 206
             G  F ++        S    +V T    S T  CQV GC  DLS+ K Y+ RHKVC +HS
Sbjct:    26 GLRFGQKIYFEDGSGSRSKNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHS 85

Query:   207 KTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ 255
             K+ KVIV+G  QRFCQQCSRFH L+EFD  KRSCRRRLA HNERRRKPQ
Sbjct:    86 KSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHNERRRKPQ 134

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0008361 "regulation of cell size" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
 Identities = 60/88 (68%), Positives = 69/88 (78%)

Query:   166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
             KKVR+ S     P+CQV  C +DLS +KDYH+RHKVC+VHSK  K +V    QRFCQQCS
Sbjct:   106 KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCS 165

Query:   226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
             RFHLL+EFD+ KRSCRRRLAGHN RRRK
Sbjct:   166 RFHLLSEFDEGKRSCRRRLAGHNRRRRK 193

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2057656 SPL3 "squamosa promoter binding protein-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 54/88 (61%), Positives = 67/88 (76%)

Query:   166 KKVRTTSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCS 225
             +K +   + S + +CQV  C  D+S +K YHKRHKVC  H+K P V ++G  QRFCQQCS
Sbjct:    40 EKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCS 99

Query:   226 RFHLLAEFDDSKRSCRRRLAGHNERRRK 253
             RFH L+EFD++KRSCRRRLAGHNERRRK
Sbjct:   100 RFHALSEFDEAKRSCRRRLAGHNERRRK 127

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0010321 "regulation of vegetative phase change" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0009908 "flower development" evidence=TAS

GO:0009911 "positive regulation of flower development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	498
pfam03110	79	pfam03110, SBP, SBP domain	5e-51

>gnl|CDD|190527 pfam03110, SBP, SBP domain

 Score =  167 bits (426), Expect = 5e-51
 Identities = 61/77 (79%), Positives = 69/77 (89%)

Query: 179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKR 238
            CQV GC  DLS++KDYH+RHKVC+VHSK P V+V+G EQRFCQQCSRFHLL+EFD+ KR
Sbjct: 1   RCQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKR 60

Query: 239 SCRRRLAGHNERRRKPQ 255
           SCRRRLAGHNERRRKPQ
Sbjct: 61  SCRRRLAGHNERRRKPQ 77

SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	498
PF03110	79	SBP: SBP domain; InterPro: IPR004333 The SBP plant	100.0

>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []

Probab=100.00  E-value=2e-38  Score=262.86  Aligned_cols=78  Identities=64%  Similarity=1.145  Sum_probs=63.2

Q ss_pred             ccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccccccchHHHHHhhhhhhhcCCCC
Q 010865          179 LCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQF  256 (498)
Q Consensus       179 ~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rL~~HN~RRRK~q~  256 (498)
                      +||||||++||+.+|.||+||||||.|+|||+|+++|.++||||||+|||+|+||||+|||||++|++||+||||+++
T Consensus         1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~   78 (79)
T PF03110_consen    1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ   78 (79)
T ss_dssp             C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred             CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999999875

Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	498
1ul4_A	94	Solution Structure Of The Dna-Binding Domain Of Squ		3e-25
1ul5_A	88	Solution Structure Of The Dna-binding Domain Of Squ		1e-18
1wj0_A	60	Solution Structure Of The Dna-Binding Domain Of Squ		4e-17

>pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 63/83 (75%)
Query: 171 TSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLL 230
           +S  S   LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L
Sbjct: 2   SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDL 61
Query: 231 AEFDDSKRSCRRRLAGHNERRRK 253
            EFD++KRSCRRRLAGHNERRRK
Sbjct: 62  QEFDEAKRSCRRRLAGHNERRRK 84

>pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRS 239
           CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+ KRS
Sbjct: 6   CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRS 65
Query: 240 CRRRLAGHNERR-RKP 254
           CRR+L  HN RR RKP
Sbjct: 66  CRRKLERHNNRRKRKP 81

>pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
           CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 6   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	498
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	2e-38
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	2e-37
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	4e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94

 Score =  134 bits (339), Expect = 2e-38
 Identities = 53/85 (62%), Positives = 63/85 (74%)

Query: 171 TSSCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLL 230
           +S  S   LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L
Sbjct: 2   SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDL 61

Query: 231 AEFDDSKRSCRRRLAGHNERRRKPQ 255
            EFD++KRSCRRRLAGHNERRRK  
Sbjct: 62  QEFDEAKRSCRRRLAGHNERRRKSS 86

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88

 Score =  131 bits (331), Expect = 2e-37
 Identities = 38/80 (47%), Positives = 52/80 (65%)

Query: 176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDD 235
               CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+
Sbjct: 2   SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDE 61

Query: 236 SKRSCRRRLAGHNERRRKPQ 255
            KRSCRR+L  HN RR++  
Sbjct: 62  GKRSCRRKLERHNNRRKRKP 81

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60

 Score =  113 bits (284), Expect = 4e-31
 Identities = 36/58 (62%), Positives = 41/58 (70%)

Query: 177 TPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
              CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 3   AICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 81/595 (13%), Positives = 164/595 (27%), Gaps = 195/595 (32%)

Query: 11  KGILYSDEVDSSV---DPFTRSRKTLMAWESKPSYNFDINKLFSDSDDVENMEFMDLCFT 67
           K IL  +E+D  +   D  + + +      SK     ++ + F +     N +F+     
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE---EMVQKFVEEVLRINYKFLMSPIK 99

Query: 68  DLTRKPCHSNSSLGTPNGEVGSDTNERLTTTPCMVTSNSFCGPESGSKISSSCMKSISQD 127
              R+P        +    +  +  +RL     +    +    +   K+           
Sbjct: 100 TEQRQP--------SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR---------- 141

Query: 128 SALIDLKLGR--LVDGRDKQCGKLFKERSV-ASSAHPSLMAKKVRT---------TSSCS 175
            AL++L+  +  L+DG     GK     +  A       ++ KV+               
Sbjct: 142 QALLELRPAKNVLIDG-VLGSGK-----TWVALDV---CLSYKVQCKMDFKIFWLNLKNC 192

Query: 176 QTP---------LCQVYGCN------------KDLSSSKDY------HKRHKVC-----D 203
            +P         L      N              + S +         K ++ C     +
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 204 VHSKTPKVIVNGNEQRFCQQC-----SRFHLLAEFDDSKRSCRRRL----AGHNERRRKP 254
           V  +  K         F   C     +RF  + +F  +  +    L            K 
Sbjct: 253 V--QNAKAW-----NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 255 QFNIHSDRSRSELPWTSLQNGTSFV---YPDMLPGGILFPERYEPVKQIKFSE------- 304
               + D    +LP   +            + +  G+   + ++ V   K +        
Sbjct: 306 LLLKYLDCRPQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 305 -------RPPYSPQLAV--PNTN--EQLLT-------------------KSSLYQGNKKQ 334
                  R  +  +L+V  P+ +    LL+                   K SL +   K+
Sbjct: 365 VLEPAEYRKMFD-RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Query: 335 HRLAIP---LDTALTFQDSSGISHSS-----GALSLLSAQSQSMPN-----------HLS 375
             ++IP   L+  +  ++   + H S            +     P            HL 
Sbjct: 424 STISIPSIYLELKVKLENEYAL-HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 376 GIPMARPLISQVSHTHLNLG--QNFVKTSGTTP------------LGKYETKGFYTSGMN 421
            I      ++      L+    +  ++   T              L  Y  K +      
Sbjct: 483 NIEHPE-RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY--KPYIC---- 535

Query: 422 SMDGAQMRSLMVPDAGHAFELKVETDEVSQESDFFKDKNCYSPEQGFTVDLIQLS 476
             D       +V      F  K+E              N    +  +T DL++++
Sbjct: 536 --DNDPKYERLVNAILD-FLPKIEE-------------NLICSK--YT-DLLRIA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	498
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	100.0
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	100.0
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	99.96

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=1.1e-41  Score=288.83  Aligned_cols=88  Identities=59%  Similarity=1.006  Sum_probs=80.5

Q ss_pred             CCCCCCccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccccccchHHHHHhhhhhhhc
Q 010865          173 SCSQTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRR  252 (498)
Q Consensus       173 ~~~~~~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rL~~HN~RRR  252 (498)
                      .+++.++|||+||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||+.|||||+||++||+|||
T Consensus         4 ~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RRR   83 (94)
T 1ul4_A            4 GSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRR   83 (94)
T ss_dssp             ----CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCC
T ss_pred             CCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 010865          253 KPQFNIHS  260 (498)
Q Consensus       253 K~q~~~~~  260 (498)
                      |+++++.+
T Consensus        84 k~~~~~~~   91 (94)
T 1ul4_A           84 KSSGESGP   91 (94)
T ss_dssp             SCCCC---
T ss_pred             cCCCCcCC
Confidence            99999754

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=2.1e-40  Score=278.33  Aligned_cols=83  Identities=46%  Similarity=0.943  Sum_probs=78.9

Q ss_pred             CCCccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccccccchHHHHHhhhhhhhcCCC
Q 010865          176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQ  255 (498)
Q Consensus       176 ~~~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rL~~HN~RRRK~q  255 (498)
                      ..++|||+||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||+.|||||+||++||+||||++
T Consensus         2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~   81 (88)
T 1ul5_A            2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP   81 (88)
T ss_dssp             -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred             CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             CCC
Q 010865          256 FNI  258 (498)
Q Consensus       256 ~~~  258 (498)
                      .+.
T Consensus        82 ~~~   84 (88)
T 1ul5_A           82 VDK   84 (88)
T ss_dssp             CSS
T ss_pred             ccC
Confidence            664

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=99.96  E-value=3.3e-31  Score=209.12  Aligned_cols=59  Identities=61%  Similarity=1.111  Sum_probs=57.2

Q ss_pred             CCCccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccc
Q 010865          176 QTPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD  234 (498)
Q Consensus       176 ~~~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFD  234 (498)
                      +.++|||+||++||+.+|+|||||||||.|+|||+|+++|+++||||||+|||+|+|||
T Consensus         2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD   60 (60)
T 1wj0_A            2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   60 (60)
T ss_dssp             -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence            46899999999999999999999999999999999999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	498
d1ul5a_	86	g.72.1.1 (A:) Squamosa promoter binding protein-li	3e-43
d1ul4a_	81	g.72.1.1 (A:) Squamosa promoter binding protein-li	1e-42
d1wj0a_	58	g.72.1.1 (A:) Squamosa-promoter binding-like prote	1e-29

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  146 bits (369), Expect = 3e-43
 Identities = 38/78 (48%), Positives = 52/78 (66%)

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
             CQV  C  D+S  K YHKRH+VC   +    V+++G  +R+CQQC +FHLL +FD+ K
Sbjct: 2   ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGK 61

Query: 238 RSCRRRLAGHNERRRKPQ 255
           RSCRR+L  HN RR++  
Sbjct: 62  RSCRRKLERHNNRRKRKP 79

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (364), Expect = 1e-42
 Identities = 51/78 (65%), Positives = 60/78 (76%)

Query: 178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSK 237
            LCQV  C  D+  +K YH+RHKVC+VH+K   V ++G  QRFCQQCSRFH L EFD++K
Sbjct: 2   RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAK 61

Query: 238 RSCRRRLAGHNERRRKPQ 255
           RSCRRRLAGHNERRRK  
Sbjct: 62  RSCRRRLAGHNERRRKSS 79

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  107 bits (270), Expect = 1e-29
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 180 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD 234
           CQV  C  DLS  KDYH+RHKVC++HSK    +V G  QRFCQQCSRFH+L EFD
Sbjct: 4   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	498
d1ul5a_	86	Squamosa promoter binding protein-like 7, DNA-bind	100.0
d1ul4a_	81	Squamosa promoter binding protein-like 4, DNA-bind	100.0
d1wj0a_	58	Squamosa-promoter binding-like protein 12, DNA-bin	99.96

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.6e-41  Score=279.25  Aligned_cols=84  Identities=45%  Similarity=0.927  Sum_probs=81.3

Q ss_pred             CCccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccccccchHHHHHhhhhhhhcCCCC
Q 010865          177 TPLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQF  256 (498)
Q Consensus       177 ~~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rL~~HN~RRRK~q~  256 (498)
                      .++||||||++||+.+|+||+||||||.|+|||.|+|+|+++||||||+|||+|+|||++|||||+||++||+||||+++
T Consensus         1 ~~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~   80 (86)
T d1ul5a_           1 VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPV   80 (86)
T ss_dssp             CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSC
T ss_pred             CCeeeeCCCcchhhhCHHhhhhhHHHHHhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCc
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 010865          257 NIHS  260 (498)
Q Consensus       257 ~~~~  260 (498)
                      ++.+
T Consensus        81 ~~~g   84 (86)
T d1ul5a_          81 DKGG   84 (86)
T ss_dssp             SSCC
T ss_pred             cccc
Confidence            8754

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.8e-41  Score=275.03  Aligned_cols=80  Identities=64%  Similarity=1.117  Sum_probs=78.2

Q ss_pred             CccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccccccchHHHHHhhhhhhhcCCCCC
Q 010865          178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFDDSKRSCRRRLAGHNERRRKPQFN  257 (498)
Q Consensus       178 ~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rL~~HN~RRRK~q~~  257 (498)
                      ..||||||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~~CqVdgC~~dls~~k~YhrRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (81)
T d1ul4a_           2 RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE   81 (81)
T ss_dssp             CCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred             CeeeeCCCcchHHhhHHhhhhhHHHHHHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999875

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=3.6e-31  Score=206.02  Aligned_cols=57  Identities=63%  Similarity=1.145  Sum_probs=55.9

Q ss_pred             CccccCCCcccccCCcchhccccccccccCCCeEEECCeehhhhhhhcccccccccc
Q 010865          178 PLCQVYGCNKDLSSSKDYHKRHKVCDVHSKTPKVIVNGNEQRFCQQCSRFHLLAEFD  234 (498)
Q Consensus       178 ~~CQVdGC~~dLs~~K~YhrRhRVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFD  234 (498)
                      .+|||+||++||+.+|+|||||||||.|+|||.|+|+|+++||||||+|||+|+|||
T Consensus         2 ~~CqV~gC~~dl~~~k~YhrRhkvCe~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD   58 (58)
T d1wj0a_           2 ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   58 (58)
T ss_dssp             EECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             ceeEeCCcchhhhhhHHhcchhhHHHHhcCCCeEEECCcccccccccCCcccccccC
Confidence            479999999999999999999999999999999999999999999999999999998