Query 010866
Match_columns 498
No_of_seqs 495 out of 2810
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 15:56:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 2E-180 7E-185 1433.4 30.4 467 1-484 3-480 (535)
2 1vco_A CTP synthetase; tetrame 100.0 3E-148 9E-153 1199.3 30.2 464 1-483 12-484 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 1E-145 3E-150 1178.2 31.6 460 1-482 3-481 (545)
4 2c5m_A CTP synthase; cytidine 100.0 6E-144 2E-148 1054.7 20.4 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 2E-142 7E-147 1051.1 18.6 273 1-273 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 3.2E-30 1.1E-34 258.8 12.9 196 282-479 10-206 (289)
7 1a9x_B Carbamoyl phosphate syn 100.0 3.6E-31 1.2E-35 275.3 3.1 208 180-421 53-291 (379)
8 2w7t_A CTP synthetase, putativ 99.9 1.3E-26 4.3E-31 230.9 11.6 173 297-479 8-182 (273)
9 3fij_A LIN1909 protein; 11172J 99.7 4.3E-17 1.5E-21 160.0 13.2 151 297-483 4-183 (254)
10 4gud_A Imidazole glycerol phos 99.6 3.4E-16 1.2E-20 148.1 6.8 146 299-482 4-154 (211)
11 2a9v_A GMP synthase; structura 99.6 3.6E-15 1.2E-19 142.7 9.6 133 296-483 12-146 (212)
12 1qdl_B Protein (anthranilate s 99.5 8.7E-15 3E-19 137.7 9.1 130 300-483 4-141 (195)
13 2vpi_A GMP synthase; guanine m 99.5 9.2E-15 3.2E-19 140.7 4.4 131 298-483 25-157 (218)
14 1o1y_A Conserved hypothetical 99.5 1.4E-13 4.9E-18 134.0 11.7 138 295-482 10-154 (239)
15 1wl8_A GMP synthase [glutamine 99.5 2.3E-13 7.7E-18 126.9 10.5 93 299-416 2-97 (189)
16 1gpw_B Amidotransferase HISH; 99.4 9.9E-14 3.4E-18 130.4 7.6 133 298-484 1-147 (201)
17 1i1q_B Anthranilate synthase c 99.4 5.2E-13 1.8E-17 125.1 12.2 97 298-414 1-99 (192)
18 3m3p_A Glutamine amido transfe 99.4 3.7E-13 1.3E-17 132.6 11.4 134 299-482 5-144 (250)
19 3l7n_A Putative uncharacterize 99.4 9.8E-13 3.4E-17 127.4 10.5 97 298-414 1-107 (236)
20 3uow_A GMP synthetase; structu 99.4 2.8E-13 9.5E-18 147.2 7.3 153 298-483 8-176 (556)
21 2ywj_A Glutamine amidotransfer 99.4 2.8E-13 9.5E-18 125.8 5.2 84 298-412 1-89 (186)
22 1gpm_A GMP synthetase, XMP ami 99.4 3.3E-13 1.1E-17 145.5 6.3 132 298-483 8-148 (525)
23 3tqi_A GMP synthase [glutamine 99.4 4.8E-13 1.7E-17 144.3 7.3 93 298-414 11-105 (527)
24 3d54_D Phosphoribosylformylgly 99.4 1.7E-12 5.7E-17 122.3 9.6 130 298-481 3-145 (213)
25 3r75_A Anthranilate/para-amino 99.3 1.2E-12 4.1E-17 144.5 9.3 95 298-417 447-547 (645)
26 1l9x_A Gamma-glutamyl hydrolas 99.3 8.9E-13 3.1E-17 133.6 7.5 100 297-413 30-146 (315)
27 1q7r_A Predicted amidotransfer 99.3 1.3E-12 4.5E-17 125.0 5.2 90 296-413 22-116 (219)
28 1ka9_H Imidazole glycerol phos 99.3 4E-12 1.4E-16 119.6 7.9 134 298-479 3-146 (200)
29 2ywb_A GMP synthase [glutamine 99.3 1.8E-12 6.3E-17 138.9 5.5 92 300-415 2-95 (503)
30 2ywd_A Glutamine amidotransfer 99.3 3.3E-12 1.1E-16 118.6 5.4 88 298-413 3-97 (191)
31 2iss_D Glutamine amidotransfer 99.2 3.6E-12 1.2E-16 121.0 5.4 90 295-412 18-112 (208)
32 2nv0_A Glutamine amidotransfer 99.2 5.6E-12 1.9E-16 118.0 5.0 88 298-413 2-94 (196)
33 2vxo_A GMP synthase [glutamine 99.2 5.4E-12 1.8E-16 140.4 5.6 130 298-483 30-162 (697)
34 2abw_A PDX2 protein, glutamina 99.2 1.7E-11 6E-16 117.4 5.1 88 297-412 3-101 (227)
35 1jvn_A Glutamine, bifunctional 99.0 9.4E-11 3.2E-15 127.3 2.4 141 298-482 5-157 (555)
36 3ugj_A Phosphoribosylformylgly 98.5 7.4E-08 2.5E-12 113.4 6.8 90 296-405 1046-1150(1303)
37 1fy2_A Aspartyl dipeptidase; s 98.5 6.3E-08 2.2E-12 93.7 3.9 88 297-405 31-127 (229)
38 3l4e_A Uncharacterized peptida 98.5 1.2E-07 4.1E-12 90.7 5.6 92 297-405 27-127 (206)
39 2h2w_A Homoserine O-succinyltr 98.2 3.5E-06 1.2E-10 85.6 9.0 50 361-410 110-166 (312)
40 2vdj_A Homoserine O-succinyltr 98.2 3.1E-06 1.1E-10 85.6 8.1 51 360-410 97-154 (301)
41 1oi4_A Hypothetical protein YH 97.7 0.00011 3.7E-09 68.5 9.6 100 297-406 23-133 (193)
42 3l18_A Intracellular protease 97.4 0.00046 1.6E-08 62.2 8.8 97 297-405 2-109 (168)
43 3qxc_A Dethiobiotin synthetase 96.9 0.0041 1.4E-07 60.6 10.2 172 1-220 21-200 (242)
44 4dzz_A Plasmid partitioning pr 96.7 0.0042 1.4E-07 56.5 8.4 89 1-153 1-89 (206)
45 2vrn_A Protease I, DR1199; cys 96.6 0.0057 2E-07 56.1 8.7 100 297-406 9-123 (190)
46 3of5_A Dethiobiotin synthetase 96.6 0.0065 2.2E-07 58.3 8.8 170 1-220 4-180 (228)
47 4e08_A DJ-1 beta; flavodoxin-l 96.4 0.0048 1.7E-07 56.8 6.3 98 299-406 7-115 (190)
48 4hcj_A THIJ/PFPI domain protei 96.3 0.0033 1.1E-07 58.3 4.8 45 361-405 68-115 (177)
49 2ab0_A YAJL; DJ-1/THIJ superfa 96.2 0.0044 1.5E-07 58.1 5.1 97 299-405 4-114 (205)
50 3er6_A Putative transcriptiona 96.1 0.0076 2.6E-07 56.8 6.1 48 358-405 70-122 (209)
51 3fgn_A Dethiobiotin synthetase 96.0 0.014 4.7E-07 57.1 7.7 168 1-219 26-196 (251)
52 2fex_A Conserved hypothetical 95.6 0.0075 2.6E-07 55.4 4.0 44 362-405 63-108 (188)
53 2rk3_A Protein DJ-1; parkinson 95.6 0.0058 2E-07 56.6 3.0 100 299-406 5-114 (197)
54 3l3b_A ES1 family protein; ssg 95.5 0.0096 3.3E-07 58.0 4.3 48 361-408 106-168 (242)
55 3uk7_A Class I glutamine amido 95.5 0.034 1.2E-06 57.0 8.7 46 361-406 281-329 (396)
56 3cne_A Putative protease I; st 95.5 0.01 3.6E-07 53.7 4.2 46 361-406 65-119 (175)
57 1xjc_A MOBB protein homolog; s 95.4 0.017 5.8E-07 53.4 5.5 44 1-46 4-48 (169)
58 3efe_A THIJ/PFPI family protei 95.4 0.02 6.9E-07 53.9 6.1 44 362-405 74-119 (212)
59 3f5d_A Protein YDEA; unknow pr 95.3 0.025 8.6E-07 53.4 6.6 44 362-405 63-107 (206)
60 1vhq_A Enhancing lycopene bios 95.2 0.01 3.5E-07 56.7 3.5 47 361-407 89-149 (232)
61 3gra_A Transcriptional regulat 95.2 0.025 8.4E-07 53.0 6.1 45 360-405 69-115 (202)
62 3uk7_A Class I glutamine amido 95.0 0.054 1.8E-06 55.5 8.5 46 361-406 88-136 (396)
63 2xxa_A Signal recognition part 95.0 0.24 8.3E-06 52.0 13.4 40 2-43 101-141 (433)
64 3ot1_A 4-methyl-5(B-hydroxyeth 94.9 0.031 1.1E-06 52.4 5.8 98 298-405 10-119 (208)
65 2xj4_A MIPZ; replication, cell 94.8 0.2 6.9E-06 48.7 11.5 40 2-42 5-44 (286)
66 2g0t_A Conserved hypothetical 94.8 0.017 5.7E-07 59.5 3.7 41 1-42 169-209 (350)
67 1u9c_A APC35852; structural ge 94.7 0.015 5.1E-07 54.7 3.1 45 361-405 88-136 (224)
68 3ej6_A Catalase-3; heme, hydro 94.7 0.11 3.7E-06 57.8 10.1 95 298-405 538-644 (688)
69 3fse_A Two-domain protein cont 94.5 0.078 2.7E-06 54.8 8.2 101 297-405 10-119 (365)
70 3en0_A Cyanophycinase; serine 94.4 0.034 1.2E-06 55.7 5.1 108 282-405 43-159 (291)
71 3dm5_A SRP54, signal recogniti 94.4 0.41 1.4E-05 50.6 13.4 40 2-43 101-140 (443)
72 3noq_A THIJ/PFPI family protei 94.3 0.039 1.3E-06 52.9 4.9 47 359-405 62-111 (231)
73 3ttv_A Catalase HPII; heme ori 94.1 0.043 1.5E-06 61.4 5.4 97 298-405 601-706 (753)
74 3kl4_A SRP54, signal recogniti 94.0 0.56 1.9E-05 49.4 13.6 39 2-42 98-136 (433)
75 3ea0_A ATPase, para family; al 94.0 0.096 3.3E-06 48.8 7.0 41 1-42 4-45 (245)
76 3kjh_A CO dehydrogenase/acetyl 93.9 0.15 5.1E-06 47.2 7.9 39 1-42 1-39 (254)
77 1rw7_A YDR533CP; alpha-beta sa 93.6 0.023 7.7E-07 54.7 1.9 45 361-405 97-145 (243)
78 3n7t_A Macrophage binding prot 93.4 0.032 1.1E-06 54.5 2.5 45 361-405 104-152 (247)
79 3mgk_A Intracellular protease/ 93.3 0.035 1.2E-06 52.4 2.5 45 361-405 64-111 (211)
80 3kkl_A Probable chaperone prot 93.2 0.035 1.2E-06 54.0 2.4 45 361-405 97-145 (244)
81 3end_A Light-independent proto 92.6 0.17 5.8E-06 49.4 6.4 43 1-45 41-83 (307)
82 3ewn_A THIJ/PFPI family protei 92.2 0.09 3.1E-06 51.3 3.9 44 362-405 84-131 (253)
83 1sy7_A Catalase 1; heme oxidat 92.1 0.23 7.9E-06 55.5 7.5 102 298-409 535-646 (715)
84 1n57_A Chaperone HSP31, protei 92.0 0.05 1.7E-06 54.1 1.8 46 360-405 143-192 (291)
85 2iuf_A Catalase; oxidoreductas 91.9 0.26 8.8E-06 54.9 7.4 95 298-405 530-646 (688)
86 2ffh_A Protein (FFH); SRP54, s 91.4 1.6 5.5E-05 45.7 12.6 40 2-43 99-138 (425)
87 3q9l_A Septum site-determining 91.0 0.3 1E-05 45.8 6.0 40 1-41 2-41 (260)
88 1g3q_A MIND ATPase, cell divis 90.9 0.32 1.1E-05 45.0 6.0 41 1-42 2-42 (237)
89 2obn_A Hypothetical protein; s 90.5 2 6.8E-05 44.1 11.9 151 1-221 152-311 (349)
90 1np6_A Molybdopterin-guanine d 89.9 0.4 1.4E-05 44.0 5.6 44 1-46 6-50 (174)
91 1ihu_A Arsenical pump-driving 89.6 0.36 1.2E-05 51.9 5.8 42 3-45 328-369 (589)
92 3k9g_A PF-32 protein; ssgcid, 88.7 0.48 1.6E-05 45.0 5.4 42 1-44 27-68 (267)
93 1hyq_A MIND, cell division inh 88.7 0.53 1.8E-05 44.4 5.7 41 1-42 2-42 (263)
94 3fwy_A Light-independent proto 88.4 0.64 2.2E-05 46.6 6.3 44 1-46 48-91 (314)
95 2ph1_A Nucleotide-binding prot 88.4 0.57 1.9E-05 44.7 5.7 42 1-43 18-59 (262)
96 2afh_E Nitrogenase iron protei 87.8 0.68 2.3E-05 44.6 5.9 42 1-44 2-43 (289)
97 1cp2_A CP2, nitrogenase iron p 87.5 0.67 2.3E-05 43.9 5.6 42 1-44 1-42 (269)
98 3zq6_A Putative arsenical pump 86.5 0.57 2E-05 46.6 4.7 41 1-42 13-53 (324)
99 1wcv_1 SOJ, segregation protei 85.8 0.78 2.7E-05 43.5 5.0 43 1-44 6-48 (257)
100 1byi_A Dethiobiotin synthase; 85.5 0.99 3.4E-05 41.4 5.4 40 1-43 1-40 (224)
101 1ls1_A Signal recognition part 83.7 7 0.00024 38.4 11.0 40 2-43 99-138 (295)
102 3ug7_A Arsenical pump-driving 83.6 1.1 3.8E-05 45.2 5.3 41 1-42 25-65 (349)
103 4gdh_A DJ-1, uncharacterized p 83.5 0.41 1.4E-05 44.4 1.8 44 360-403 71-119 (194)
104 1nks_A Adenylate kinase; therm 83.2 0.86 2.9E-05 40.2 3.8 36 1-38 1-36 (194)
105 3bhn_A THIJ/PFPI domain protei 83.2 0.27 9.2E-06 47.4 0.5 45 360-406 78-127 (236)
106 3pg5_A Uncharacterized protein 83.0 1.2 4.2E-05 44.9 5.3 46 1-47 1-46 (361)
107 2oze_A ORF delta'; para, walke 80.9 1.4 4.9E-05 42.4 4.7 42 3-44 36-78 (298)
108 3cio_A ETK, tyrosine-protein k 79.1 2.1 7.3E-05 42.1 5.4 155 1-219 104-276 (299)
109 3fkq_A NTRC-like two-domain pr 79.1 1.8 6.1E-05 43.8 4.9 44 1-45 143-186 (373)
110 1ihu_A Arsenical pump-driving 78.9 2 6.8E-05 46.1 5.4 39 2-42 9-47 (589)
111 3io3_A DEHA2D07832P; chaperone 78.5 1.9 6.6E-05 43.8 4.9 40 1-42 18-59 (348)
112 3iqw_A Tail-anchored protein t 78.4 1.8 6.3E-05 43.6 4.7 40 2-43 17-56 (334)
113 3bfv_A CAPA1, CAPB2, membrane 78.2 2.7 9.2E-05 40.8 5.7 156 1-220 82-255 (271)
114 1z0s_A Probable inorganic poly 78.1 1.1 3.8E-05 44.5 3.0 72 297-400 29-100 (278)
115 2woo_A ATPase GET3; tail-ancho 77.8 1.8 6.2E-05 43.2 4.4 41 2-43 19-59 (329)
116 4b4o_A Epimerase family protei 77.7 2.3 7.9E-05 40.7 5.0 34 1-41 1-34 (298)
117 2woj_A ATPase GET3; tail-ancho 77.0 1.6 5.4E-05 44.3 3.8 42 2-44 18-61 (354)
118 2z0h_A DTMP kinase, thymidylat 76.2 3.3 0.00011 36.8 5.2 33 2-36 1-33 (197)
119 3cwq_A Para family chromosome 76.1 2.7 9.2E-05 38.8 4.8 40 2-43 1-40 (209)
120 1gtv_A TMK, thymidylate kinase 73.2 1.4 4.8E-05 39.9 2.0 36 2-39 1-36 (214)
121 3guy_A Short-chain dehydrogena 72.1 2 6.8E-05 39.7 2.8 34 1-40 1-34 (230)
122 3ff4_A Uncharacterized protein 71.8 21 0.00073 30.7 9.2 37 362-404 82-118 (122)
123 1zu4_A FTSY; GTPase, signal re 71.5 5.4 0.00019 39.9 6.0 39 2-42 106-144 (320)
124 2f1r_A Molybdopterin-guanine d 71.1 3 0.0001 37.9 3.8 40 1-42 2-41 (171)
125 2v3c_C SRP54, signal recogniti 70.3 2.5 8.5E-05 44.2 3.4 40 2-43 100-139 (432)
126 3la6_A Tyrosine-protein kinase 68.0 5.2 0.00018 39.2 5.0 40 2-42 93-132 (286)
127 1vma_A Cell division protein F 67.9 7.1 0.00024 38.8 6.0 40 2-43 105-144 (306)
128 2pbr_A DTMP kinase, thymidylat 67.1 5.2 0.00018 35.1 4.4 33 2-36 1-33 (195)
129 2oyn_A Hypothetical protein MJ 66.2 2.2 7.5E-05 38.7 1.6 31 2-32 5-39 (146)
130 2px0_A Flagellar biosynthesis 65.7 6.3 0.00021 38.9 5.1 39 2-42 106-145 (296)
131 1fjh_A 3alpha-hydroxysteroid d 65.0 4.8 0.00016 37.4 3.9 34 1-40 1-34 (257)
132 1zmt_A Haloalcohol dehalogenas 64.7 4.8 0.00016 37.8 3.8 31 1-37 1-31 (254)
133 3pfn_A NAD kinase; structural 62.6 9.2 0.00032 39.4 5.7 94 298-400 39-141 (365)
134 1j8m_F SRP54, signal recogniti 62.2 9.3 0.00032 37.7 5.5 40 2-43 99-138 (297)
135 3ez2_A Plasmid partition prote 61.7 10 0.00035 38.3 5.9 43 1-44 108-156 (398)
136 1eiw_A Hypothetical protein MT 61.1 6 0.00021 34.0 3.4 39 359-397 35-73 (111)
137 1rz3_A Hypothetical protein rb 60.1 11 0.00038 34.1 5.4 41 2-44 23-63 (201)
138 1nn5_A Similar to deoxythymidy 59.5 9.3 0.00032 34.2 4.7 34 2-37 10-43 (215)
139 2j37_W Signal recognition part 58.9 12 0.00041 40.0 6.0 40 2-43 102-141 (504)
140 3a4m_A L-seryl-tRNA(SEC) kinas 58.2 9.1 0.00031 36.4 4.6 39 1-41 4-42 (260)
141 3ez9_A Para; DNA binding, wing 57.2 8.7 0.0003 39.0 4.4 45 1-46 111-161 (403)
142 1p3d_A UDP-N-acetylmuramate--a 56.7 11 0.00039 39.2 5.3 57 2-64 119-175 (475)
143 4fyk_A Deoxyribonucleoside 5'- 56.3 26 0.00088 31.7 6.9 94 298-399 3-102 (152)
144 3ksm_A ABC-type sugar transpor 56.0 33 0.0011 31.3 8.0 33 361-397 57-90 (276)
145 3h2s_A Putative NADH-flavin re 55.7 12 0.0004 33.7 4.7 34 1-41 1-34 (224)
146 4edh_A DTMP kinase, thymidylat 55.3 14 0.00048 34.5 5.2 35 2-38 7-41 (213)
147 3igf_A ALL4481 protein; two-do 55.1 10 0.00036 38.8 4.6 39 1-42 2-40 (374)
148 3gbv_A Putative LACI-family tr 55.0 53 0.0018 30.4 9.3 34 361-398 68-101 (304)
149 3ew7_A LMO0794 protein; Q8Y8U8 54.6 14 0.00049 32.9 5.0 34 1-41 1-34 (221)
150 2x5o_A UDP-N-acetylmuramoylala 54.5 15 0.00052 37.8 5.8 55 2-70 105-164 (439)
151 2f00_A UDP-N-acetylmuramate--L 54.0 13 0.00045 38.9 5.3 57 2-64 120-176 (491)
152 1kht_A Adenylate kinase; phosp 53.8 12 0.00041 32.7 4.3 34 2-37 4-37 (192)
153 3llv_A Exopolyphosphatase-rela 53.8 9.6 0.00033 32.2 3.5 33 2-41 7-39 (141)
154 1w78_A FOLC bifunctional prote 53.7 14 0.00046 37.9 5.2 32 2-37 50-81 (422)
155 3l6e_A Oxidoreductase, short-c 53.3 9.1 0.00031 35.6 3.6 33 1-39 3-35 (235)
156 2yvu_A Probable adenylyl-sulfa 52.5 14 0.00048 32.6 4.6 39 2-42 14-52 (186)
157 1zmo_A Halohydrin dehalogenase 52.3 11 0.00036 35.2 3.9 31 1-37 1-31 (244)
158 1jbw_A Folylpolyglutamate synt 52.0 13 0.00046 38.0 4.9 32 2-37 40-71 (428)
159 2wwf_A Thymidilate kinase, put 51.4 16 0.00056 32.6 4.9 34 2-37 11-44 (212)
160 1u0t_A Inorganic polyphosphate 51.2 12 0.0004 37.0 4.2 93 299-400 6-108 (307)
161 4e4y_A Short chain dehydrogena 50.6 7.8 0.00027 36.0 2.6 35 1-40 4-38 (244)
162 3nrs_A Dihydrofolate:folylpoly 49.9 13 0.00045 38.4 4.5 31 2-36 53-83 (437)
163 1j6u_A UDP-N-acetylmuramate-al 49.8 21 0.00073 37.2 6.1 38 2-44 115-152 (469)
164 2an1_A Putative kinase; struct 49.7 18 0.00062 35.0 5.2 88 299-400 7-96 (292)
165 3orf_A Dihydropteridine reduct 49.6 12 0.00042 34.9 3.9 34 2-41 23-56 (251)
166 2jah_A Clavulanic acid dehydro 49.4 11 0.00037 35.2 3.4 32 2-39 8-39 (247)
167 3i1j_A Oxidoreductase, short c 49.3 10 0.00036 34.9 3.3 32 2-39 15-46 (247)
168 3kb2_A SPBC2 prophage-derived 48.6 13 0.00044 31.9 3.5 25 1-27 1-25 (173)
169 3o26_A Salutaridine reductase; 48.1 11 0.00038 35.7 3.3 32 2-39 13-44 (311)
170 1o5z_A Folylpolyglutamate synt 47.9 16 0.00056 37.8 4.8 32 2-37 53-84 (442)
171 3e03_A Short chain dehydrogena 47.6 13 0.00045 35.3 3.7 31 2-38 7-37 (274)
172 3kts_A Glycerol uptake operon 47.2 20 0.00068 33.7 4.8 79 112-217 11-89 (192)
173 3h7a_A Short chain dehydrogena 47.1 13 0.00046 34.8 3.7 32 2-39 8-39 (252)
174 4a0g_A Adenosylmethionine-8-am 47.1 16 0.00053 41.4 4.8 36 2-38 35-75 (831)
175 3ged_A Short-chain dehydrogena 46.7 12 0.00042 35.9 3.4 33 2-40 3-35 (247)
176 3vtz_A Glucose 1-dehydrogenase 46.5 13 0.00046 35.3 3.6 33 2-40 15-47 (269)
177 3asu_A Short-chain dehydrogena 46.4 16 0.00054 34.2 4.1 31 2-38 1-31 (248)
178 1g5t_A COB(I)alamin adenosyltr 46.2 11 0.00038 35.4 2.9 29 13-41 36-66 (196)
179 3rht_A (gatase1)-like protein; 46.1 69 0.0023 31.1 8.7 81 298-397 5-85 (259)
180 1t0b_A THUA-like protein; treh 46.0 56 0.0019 31.4 8.0 88 297-400 7-106 (252)
181 2ekp_A 2-deoxy-D-gluconate 3-d 45.9 15 0.00051 34.0 3.7 33 2-40 3-35 (239)
182 3tpc_A Short chain alcohol deh 45.8 15 0.0005 34.4 3.7 32 2-39 8-39 (257)
183 3t4x_A Oxidoreductase, short c 45.8 12 0.00042 35.3 3.2 32 2-39 11-42 (267)
184 2hq1_A Glucose/ribitol dehydro 45.7 13 0.00044 34.1 3.2 30 2-37 6-35 (247)
185 3rwb_A TPLDH, pyridoxal 4-dehy 45.7 12 0.00042 34.9 3.1 30 2-37 7-36 (247)
186 3lf2_A Short chain oxidoreduct 45.6 13 0.00046 35.0 3.4 32 2-39 9-40 (265)
187 3zv4_A CIS-2,3-dihydrobiphenyl 45.6 13 0.00045 35.5 3.4 30 2-37 6-35 (281)
188 3gvc_A Oxidoreductase, probabl 45.6 15 0.0005 35.3 3.8 31 2-38 30-60 (277)
189 3p19_A BFPVVD8, putative blue 45.5 13 0.00043 35.4 3.3 31 2-38 17-47 (266)
190 3lyl_A 3-oxoacyl-(acyl-carrier 45.2 13 0.00046 34.2 3.3 31 2-38 6-36 (247)
191 2d1y_A Hypothetical protein TT 45.1 15 0.00052 34.3 3.7 33 2-40 7-39 (256)
192 4hf7_A Putative acylhydrolase; 45.0 30 0.001 31.1 5.6 61 118-186 63-130 (209)
193 3nyw_A Putative oxidoreductase 44.9 12 0.00041 35.1 3.0 32 2-39 8-39 (250)
194 2dtx_A Glucose 1-dehydrogenase 44.7 16 0.00054 34.6 3.8 34 2-41 9-42 (264)
195 2dkn_A 3-alpha-hydroxysteroid 44.6 23 0.00077 32.3 4.8 34 1-40 1-34 (255)
196 4e5v_A Putative THUA-like prot 44.6 56 0.0019 32.0 7.9 90 296-401 3-96 (281)
197 3pxx_A Carveol dehydrogenase; 44.5 14 0.00048 34.9 3.4 33 2-40 11-43 (287)
198 2fwm_X 2,3-dihydro-2,3-dihydro 44.4 16 0.00055 34.0 3.7 33 2-40 8-40 (250)
199 4dmm_A 3-oxoacyl-[acyl-carrier 44.3 13 0.00045 35.3 3.1 30 2-37 29-58 (269)
200 3ezl_A Acetoacetyl-COA reducta 44.2 14 0.00046 34.4 3.2 29 2-36 14-42 (256)
201 2cfc_A 2-(R)-hydroxypropyl-COM 43.7 16 0.00054 33.6 3.5 31 2-38 3-33 (250)
202 8abp_A L-arabinose-binding pro 43.5 1E+02 0.0035 28.6 9.3 33 361-397 56-88 (306)
203 3l49_A ABC sugar (ribose) tran 43.3 99 0.0034 28.4 9.1 33 361-397 60-92 (291)
204 4eso_A Putative oxidoreductase 43.1 15 0.00053 34.5 3.4 32 2-39 9-40 (255)
205 2vos_A Folylpolyglutamate synt 43.0 18 0.00061 38.1 4.2 31 2-36 65-95 (487)
206 3ai3_A NADPH-sorbose reductase 43.0 16 0.00053 34.3 3.4 31 2-38 8-38 (263)
207 4b79_A PA4098, probable short- 43.0 17 0.00058 35.0 3.7 33 2-40 12-44 (242)
208 2ew8_A (S)-1-phenylethanol deh 43.0 17 0.00059 33.8 3.7 32 2-39 8-39 (249)
209 1vl8_A Gluconate 5-dehydrogena 42.8 15 0.00053 34.7 3.4 32 2-39 22-53 (267)
210 3a28_C L-2.3-butanediol dehydr 42.8 15 0.0005 34.4 3.2 32 2-39 3-34 (258)
211 3lv8_A DTMP kinase, thymidylat 42.7 25 0.00085 33.6 4.8 35 2-38 28-63 (236)
212 3m1a_A Putative dehydrogenase; 42.7 17 0.00057 34.4 3.6 31 2-38 6-36 (281)
213 3tfo_A Putative 3-oxoacyl-(acy 42.6 15 0.00051 35.1 3.3 33 2-40 5-37 (264)
214 3bos_A Putative DNA replicatio 42.6 41 0.0014 30.0 6.1 59 3-63 54-112 (242)
215 3oid_A Enoyl-[acyl-carrier-pro 42.5 15 0.00052 34.6 3.3 29 2-36 5-33 (258)
216 4iiu_A 3-oxoacyl-[acyl-carrier 42.5 15 0.0005 34.6 3.1 29 2-36 27-55 (267)
217 2pjk_A 178AA long hypothetical 42.5 32 0.0011 31.4 5.3 47 111-166 59-106 (178)
218 3op4_A 3-oxoacyl-[acyl-carrier 42.4 15 0.00053 34.2 3.3 31 2-38 10-40 (248)
219 3uce_A Dehydrogenase; rossmann 42.4 11 0.00036 34.6 2.1 33 2-40 7-39 (223)
220 4e3z_A Putative oxidoreductase 42.4 15 0.00051 34.6 3.2 29 2-36 27-55 (272)
221 2gk3_A Putative cytoplasmic pr 42.3 16 0.00054 35.2 3.4 71 313-397 42-124 (256)
222 3ioy_A Short-chain dehydrogena 42.3 19 0.00064 35.3 4.0 32 2-39 9-40 (319)
223 3tl3_A Short-chain type dehydr 42.1 14 0.00047 34.6 2.9 30 2-37 10-39 (257)
224 2uvd_A 3-oxoacyl-(acyl-carrier 42.0 15 0.00052 34.0 3.2 30 2-37 5-34 (246)
225 3ek2_A Enoyl-(acyl-carrier-pro 42.0 20 0.00068 33.3 4.0 31 2-37 15-46 (271)
226 3rkr_A Short chain oxidoreduct 42.0 16 0.00054 34.4 3.3 31 2-38 30-60 (262)
227 3ppi_A 3-hydroxyacyl-COA dehyd 42.0 18 0.00062 34.2 3.7 32 2-39 31-62 (281)
228 3f1l_A Uncharacterized oxidore 42.0 16 0.00056 34.1 3.4 31 2-38 13-43 (252)
229 2rhc_B Actinorhodin polyketide 41.8 16 0.00056 34.7 3.4 32 2-39 23-54 (277)
230 1mxh_A Pteridine reductase 2; 41.8 15 0.00052 34.6 3.1 30 2-37 12-41 (276)
231 1xx6_A Thymidine kinase; NESG, 41.8 26 0.0009 32.2 4.7 33 2-38 9-43 (191)
232 1iy8_A Levodione reductase; ox 41.5 17 0.00057 34.2 3.4 31 2-38 14-44 (267)
233 3qiv_A Short-chain dehydrogena 41.5 17 0.00058 33.7 3.4 31 2-38 10-40 (253)
234 3pk0_A Short-chain dehydrogena 41.5 16 0.00053 34.5 3.2 32 2-39 11-42 (262)
235 2p67_A LAO/AO transport system 41.5 1.1E+02 0.0038 30.1 9.6 40 2-43 57-96 (341)
236 3tzq_B Short-chain type dehydr 41.5 19 0.00064 34.2 3.7 32 2-39 12-43 (271)
237 4imr_A 3-oxoacyl-(acyl-carrier 41.5 17 0.00059 34.7 3.5 30 2-37 34-63 (275)
238 3tsc_A Putative oxidoreductase 41.4 17 0.00057 34.5 3.4 32 2-39 12-43 (277)
239 2o23_A HADH2 protein; HSD17B10 41.4 19 0.00065 33.3 3.7 32 2-39 13-44 (265)
240 2wsb_A Galactitol dehydrogenas 41.3 17 0.00059 33.4 3.4 31 2-38 12-42 (254)
241 4dry_A 3-oxoacyl-[acyl-carrier 41.3 16 0.00053 35.1 3.2 31 2-38 34-64 (281)
242 2ae2_A Protein (tropinone redu 41.2 17 0.00059 34.0 3.4 32 2-39 10-41 (260)
243 2nwq_A Probable short-chain de 41.1 22 0.00075 33.9 4.2 33 2-40 22-54 (272)
244 3dqp_A Oxidoreductase YLBE; al 41.1 23 0.00079 31.9 4.2 34 1-41 1-34 (219)
245 1h5q_A NADP-dependent mannitol 41.0 18 0.0006 33.5 3.4 30 2-37 15-44 (265)
246 1e7w_A Pteridine reductase; di 40.9 16 0.00054 35.1 3.2 31 2-38 10-40 (291)
247 3s55_A Putative short-chain de 40.9 17 0.00058 34.4 3.4 33 2-40 11-43 (281)
248 1spx_A Short-chain reductase f 40.9 16 0.00055 34.4 3.2 32 2-39 7-38 (278)
249 4tmk_A Protein (thymidylate ki 40.8 28 0.00097 32.5 4.8 33 2-36 4-37 (213)
250 3o38_A Short chain dehydrogena 40.7 21 0.00073 33.3 4.0 33 2-39 23-55 (266)
251 4dqx_A Probable oxidoreductase 40.7 17 0.00059 34.7 3.4 31 2-38 28-58 (277)
252 3uve_A Carveol dehydrogenase ( 40.6 17 0.00059 34.5 3.4 33 2-40 12-44 (286)
253 1edo_A Beta-keto acyl carrier 40.6 17 0.00057 33.3 3.1 29 2-36 2-30 (244)
254 3tjr_A Short chain dehydrogena 40.5 17 0.00059 35.1 3.4 30 2-37 32-61 (301)
255 3r1i_A Short-chain type dehydr 40.5 19 0.00066 34.3 3.7 30 2-37 33-62 (276)
256 3rd5_A Mypaa.01249.C; ssgcid, 40.4 18 0.00061 34.5 3.5 33 2-40 17-49 (291)
257 3icc_A Putative 3-oxoacyl-(acy 40.4 17 0.00058 33.6 3.2 30 2-37 8-37 (255)
258 3t7c_A Carveol dehydrogenase; 40.4 17 0.00059 35.0 3.4 34 2-41 29-62 (299)
259 3sx2_A Putative 3-ketoacyl-(ac 40.4 18 0.00061 34.2 3.4 32 2-39 14-45 (278)
260 3g1w_A Sugar ABC transporter; 40.3 1.1E+02 0.0037 28.5 8.9 33 361-397 60-92 (305)
261 2qq5_A DHRS1, dehydrogenase/re 40.2 17 0.00059 33.9 3.3 31 2-38 6-36 (260)
262 3gem_A Short chain dehydrogena 40.2 15 0.00052 34.7 2.9 33 2-40 28-60 (260)
263 3un1_A Probable oxidoreductase 40.1 19 0.00067 33.9 3.6 33 2-40 29-61 (260)
264 3l6u_A ABC-type sugar transpor 39.9 1.1E+02 0.0038 28.1 8.9 33 361-397 63-95 (293)
265 3lkv_A Uncharacterized conserv 39.7 76 0.0026 30.4 7.9 67 295-370 6-77 (302)
266 3v2g_A 3-oxoacyl-[acyl-carrier 39.6 18 0.00062 34.4 3.4 30 2-37 32-61 (271)
267 1geg_A Acetoin reductase; SDR 39.6 19 0.00064 33.6 3.4 31 2-38 3-33 (256)
268 3ak4_A NADH-dependent quinucli 39.5 19 0.00064 33.7 3.4 31 2-38 13-43 (263)
269 2q2v_A Beta-D-hydroxybutyrate 39.4 19 0.00065 33.6 3.4 30 2-37 5-34 (255)
270 1vjn_A Zn-dependent hydrolase 39.2 33 0.0011 31.8 5.0 71 139-219 138-208 (220)
271 3ftp_A 3-oxoacyl-[acyl-carrier 39.1 18 0.00061 34.5 3.2 30 2-37 29-58 (270)
272 3rot_A ABC sugar transporter, 39.1 96 0.0033 28.9 8.4 33 361-397 60-92 (297)
273 2z1n_A Dehydrogenase; reductas 39.0 19 0.00066 33.6 3.4 31 2-38 8-38 (260)
274 1yde_A Retinal dehydrogenase/r 38.8 19 0.00066 34.1 3.4 32 2-39 10-41 (270)
275 3ijr_A Oxidoreductase, short c 38.7 21 0.00073 34.2 3.7 32 2-39 48-79 (291)
276 3uug_A Multiple sugar-binding 38.5 1.3E+02 0.0044 28.3 9.2 33 361-397 58-90 (330)
277 2x9g_A PTR1, pteridine reducta 38.4 18 0.00061 34.5 3.1 32 2-39 24-55 (288)
278 4e6p_A Probable sorbitol dehyd 38.3 20 0.00069 33.5 3.4 31 2-38 9-39 (259)
279 1xu9_A Corticosteroid 11-beta- 38.3 19 0.00066 34.1 3.3 32 2-39 29-60 (286)
280 2ptg_A Enoyl-acyl carrier redu 38.2 24 0.00083 34.2 4.0 33 2-39 10-43 (319)
281 3svt_A Short-chain type dehydr 38.1 20 0.00069 34.0 3.4 33 2-40 12-44 (281)
282 1uls_A Putative 3-oxoacyl-acyl 38.0 21 0.00071 33.2 3.4 32 2-39 6-37 (245)
283 3uf0_A Short-chain dehydrogena 38.0 20 0.00068 34.2 3.4 30 2-37 32-61 (273)
284 3hp4_A GDSL-esterase; psychrot 37.9 52 0.0018 28.2 5.8 74 91-174 21-103 (185)
285 3sc4_A Short chain dehydrogena 37.9 21 0.0007 34.2 3.4 33 2-40 10-42 (285)
286 1yo6_A Putative carbonyl reduc 37.6 21 0.00071 32.4 3.3 33 2-40 4-38 (250)
287 3v8b_A Putative dehydrogenase, 37.6 21 0.00072 34.2 3.5 31 2-38 29-59 (283)
288 3rih_A Short chain dehydrogena 37.5 21 0.00072 34.6 3.5 33 2-40 42-74 (293)
289 3m9w_A D-xylose-binding peripl 37.5 79 0.0027 29.7 7.5 82 298-397 3-89 (313)
290 3ko8_A NAD-dependent epimerase 37.5 33 0.0011 32.4 4.8 31 4-40 3-33 (312)
291 2plr_A DTMP kinase, probable t 37.4 33 0.0011 30.3 4.6 30 2-34 5-34 (213)
292 3is3_A 17BETA-hydroxysteroid d 37.4 20 0.00068 33.9 3.2 29 2-36 19-47 (270)
293 3edm_A Short chain dehydrogena 37.3 21 0.00072 33.5 3.4 30 2-37 9-38 (259)
294 3osu_A 3-oxoacyl-[acyl-carrier 37.3 20 0.00068 33.3 3.1 29 2-36 5-33 (246)
295 2h7i_A Enoyl-[acyl-carrier-pro 37.2 29 0.001 32.6 4.4 32 2-38 8-40 (269)
296 3v2h_A D-beta-hydroxybutyrate 37.1 21 0.00072 34.1 3.4 30 2-37 26-55 (281)
297 2zat_A Dehydrogenase/reductase 37.1 21 0.00072 33.3 3.3 31 2-38 15-45 (260)
298 2i2c_A Probable inorganic poly 37.0 11 0.00037 36.6 1.3 35 362-401 35-71 (272)
299 3dhn_A NAD-dependent epimerase 36.8 35 0.0012 30.6 4.7 35 1-41 4-38 (227)
300 4h15_A Short chain alcohol deh 36.8 20 0.0007 34.5 3.2 31 2-38 12-42 (261)
301 3ksu_A 3-oxoacyl-acyl carrier 36.8 17 0.00057 34.4 2.5 30 2-37 12-41 (262)
302 1x1t_A D(-)-3-hydroxybutyrate 36.7 21 0.00073 33.3 3.3 30 2-37 5-34 (260)
303 4fn4_A Short chain dehydrogena 36.7 22 0.00074 34.4 3.4 32 2-39 8-39 (254)
304 4f67_A UPF0176 protein LPG2838 36.7 22 0.00074 34.8 3.4 61 2-71 183-247 (265)
305 1e6c_A Shikimate kinase; phosp 36.5 22 0.00074 30.6 3.1 25 1-27 2-26 (173)
306 1ae1_A Tropinone reductase-I; 36.4 23 0.00077 33.5 3.4 32 2-39 22-53 (273)
307 3p32_A Probable GTPase RV1496/ 36.4 42 0.0014 33.4 5.6 41 2-44 80-120 (355)
308 1hdc_A 3-alpha, 20 beta-hydrox 36.3 22 0.00074 33.3 3.3 31 2-38 6-36 (254)
309 3uxy_A Short-chain dehydrogena 36.3 20 0.00067 34.1 3.0 30 2-37 29-58 (266)
310 4gkb_A 3-oxoacyl-[acyl-carrier 36.2 25 0.00086 33.9 3.7 30 2-37 8-37 (258)
311 1uuy_A CNX1, molybdopterin bio 36.1 64 0.0022 28.8 6.3 47 111-166 49-96 (167)
312 4g81_D Putative hexonate dehyd 36.0 18 0.0006 35.0 2.6 30 2-37 10-39 (255)
313 3ucx_A Short chain dehydrogena 36.0 28 0.00095 32.7 4.0 31 2-38 12-42 (264)
314 1gz6_A Estradiol 17 beta-dehyd 36.0 19 0.00066 35.4 2.9 30 2-37 10-39 (319)
315 2r8r_A Sensor protein; KDPD, P 35.9 30 0.001 33.2 4.2 32 11-42 14-45 (228)
316 4hp8_A 2-deoxy-D-gluconate 3-d 35.9 24 0.00081 34.1 3.5 30 2-37 10-39 (247)
317 3v9p_A DTMP kinase, thymidylat 35.9 30 0.001 32.7 4.2 35 2-38 26-64 (227)
318 3qlj_A Short chain dehydrogena 35.8 21 0.00071 34.8 3.1 31 2-38 28-58 (322)
319 3gk3_A Acetoacetyl-COA reducta 35.8 20 0.00067 33.8 2.9 29 2-36 26-54 (269)
320 1sby_A Alcohol dehydrogenase; 35.7 25 0.00086 32.5 3.6 31 2-38 6-37 (254)
321 1e8c_A UDP-N-acetylmuramoylala 35.7 40 0.0014 35.3 5.5 33 2-38 109-141 (498)
322 1zem_A Xylitol dehydrogenase; 35.7 23 0.0008 33.1 3.4 32 2-39 8-39 (262)
323 4fc7_A Peroxisomal 2,4-dienoyl 35.5 21 0.00073 33.9 3.1 30 2-37 28-57 (277)
324 3sho_A Transcriptional regulat 35.4 2.2E+02 0.0076 24.7 10.7 95 282-398 27-121 (187)
325 2o2s_A Enoyl-acyl carrier redu 35.2 26 0.0009 33.9 3.8 33 2-39 10-43 (315)
326 3jy6_A Transcriptional regulat 35.2 1.7E+02 0.0057 26.8 9.3 31 361-398 62-92 (276)
327 4ibo_A Gluconate dehydrogenase 35.2 19 0.00064 34.3 2.6 30 2-37 27-56 (271)
328 1xhl_A Short-chain dehydrogena 35.2 22 0.00076 34.3 3.2 32 2-39 27-58 (297)
329 3ld9_A DTMP kinase, thymidylat 35.1 40 0.0014 31.9 4.9 33 2-36 22-55 (223)
330 3cxt_A Dehydrogenase with diff 35.1 24 0.00082 34.0 3.4 31 2-38 35-65 (291)
331 3nrc_A Enoyl-[acyl-carrier-pro 34.9 33 0.0011 32.5 4.3 34 2-40 27-61 (280)
332 1gee_A Glucose 1-dehydrogenase 34.9 23 0.0008 32.7 3.2 30 2-37 8-37 (261)
333 1vi6_A 30S ribosomal protein S 34.9 1.4E+02 0.0047 28.4 8.5 77 298-398 69-145 (208)
334 3pzy_A MOG; ssgcid, seattle st 34.8 36 0.0012 30.6 4.3 45 111-166 46-91 (164)
335 2pez_A Bifunctional 3'-phospho 34.8 52 0.0018 28.6 5.4 32 2-35 6-37 (179)
336 3cs3_A Sugar-binding transcrip 34.8 91 0.0031 28.6 7.3 30 362-397 57-86 (277)
337 1xq1_A Putative tropinone redu 34.8 23 0.00079 32.9 3.2 33 2-40 15-47 (266)
338 2c07_A 3-oxoacyl-(acyl-carrier 34.7 19 0.00065 34.3 2.6 31 2-38 45-75 (285)
339 1yxm_A Pecra, peroxisomal tran 34.6 25 0.00084 33.5 3.4 31 2-38 19-49 (303)
340 3n74_A 3-ketoacyl-(acyl-carrie 34.5 26 0.00088 32.5 3.5 32 2-39 10-41 (261)
341 2b4q_A Rhamnolipids biosynthes 34.5 23 0.00078 33.7 3.1 30 2-37 30-59 (276)
342 1fmc_A 7 alpha-hydroxysteroid 34.5 21 0.00073 32.7 2.8 31 2-38 12-42 (255)
343 1hxh_A 3BETA/17BETA-hydroxyste 34.4 22 0.00074 33.2 2.9 30 2-37 7-36 (253)
344 3u5t_A 3-oxoacyl-[acyl-carrier 34.3 22 0.00075 33.8 2.9 29 2-36 28-56 (267)
345 3oec_A Carveol dehydrogenase ( 34.2 24 0.00081 34.4 3.3 31 2-38 47-77 (317)
346 3evn_A Oxidoreductase, GFO/IDH 34.2 70 0.0024 31.1 6.7 25 296-324 4-28 (329)
347 1g0o_A Trihydroxynaphthalene r 34.2 26 0.0009 33.2 3.5 30 2-37 30-59 (283)
348 3ctm_A Carbonyl reductase; alc 34.2 28 0.00095 32.7 3.7 31 2-38 35-65 (279)
349 3imf_A Short chain dehydrogena 34.1 24 0.00084 33.0 3.2 31 2-38 7-37 (257)
350 3sju_A Keto reductase; short-c 34.1 26 0.00088 33.4 3.4 31 2-38 25-55 (279)
351 4egf_A L-xylulose reductase; s 34.0 24 0.00082 33.3 3.2 32 2-39 21-52 (266)
352 2qhx_A Pteridine reductase 1; 33.9 23 0.0008 34.8 3.2 31 2-38 47-77 (328)
353 1sny_A Sniffer CG10964-PA; alp 33.9 26 0.00087 32.6 3.3 34 1-40 21-57 (267)
354 2pd4_A Enoyl-[acyl-carrier-pro 33.9 33 0.0011 32.4 4.1 32 2-38 7-39 (275)
355 3grp_A 3-oxoacyl-(acyl carrier 33.8 25 0.00085 33.3 3.3 31 2-38 28-58 (266)
356 1orr_A CDP-tyvelose-2-epimeras 33.8 35 0.0012 32.6 4.4 31 1-37 1-31 (347)
357 3u9l_A 3-oxoacyl-[acyl-carrier 33.7 27 0.00093 34.3 3.6 30 2-37 6-35 (324)
358 2bgk_A Rhizome secoisolaricire 33.6 27 0.00092 32.6 3.4 31 2-38 17-47 (278)
359 2p91_A Enoyl-[acyl-carrier-pro 33.5 36 0.0012 32.3 4.3 32 2-38 22-54 (285)
360 2nm0_A Probable 3-oxacyl-(acyl 33.2 32 0.0011 32.3 3.9 33 2-40 22-54 (253)
361 2a4k_A 3-oxoacyl-[acyl carrier 33.2 27 0.00094 32.9 3.4 31 2-38 7-37 (263)
362 2ph3_A 3-oxoacyl-[acyl carrier 33.2 34 0.0012 31.1 4.0 31 1-37 1-31 (245)
363 2v54_A DTMP kinase, thymidylat 33.1 25 0.00085 31.1 3.0 31 2-36 5-35 (204)
364 4ag6_A VIRB4 ATPase, type IV s 33.0 44 0.0015 33.4 5.1 50 3-56 37-102 (392)
365 3gv0_A Transcriptional regulat 32.9 1.2E+02 0.004 28.1 7.8 31 361-397 65-95 (288)
366 1qsg_A Enoyl-[acyl-carrier-pro 32.8 38 0.0013 31.7 4.3 32 2-38 10-42 (265)
367 1xkq_A Short-chain reductase f 32.5 26 0.00089 33.2 3.2 32 2-39 7-38 (280)
368 3tb6_A Arabinose metabolism tr 32.5 2E+02 0.0068 26.3 9.3 37 361-398 70-106 (298)
369 4da9_A Short-chain dehydrogena 32.4 28 0.00095 33.2 3.4 30 2-37 30-59 (280)
370 1uj2_A Uridine-cytidine kinase 32.4 38 0.0013 31.6 4.3 24 2-27 23-46 (252)
371 3l77_A Short-chain alcohol deh 32.3 44 0.0015 30.4 4.6 33 1-39 2-34 (235)
372 1uf9_A TT1252 protein; P-loop, 32.3 35 0.0012 30.0 3.8 25 2-32 9-33 (203)
373 4fgs_A Probable dehydrogenase 32.2 28 0.00097 33.9 3.4 31 2-38 30-60 (273)
374 1m7g_A Adenylylsulfate kinase; 32.0 36 0.0012 30.8 3.9 35 2-38 26-61 (211)
375 2p5y_A UDP-glucose 4-epimerase 31.9 39 0.0013 32.0 4.3 30 1-37 1-30 (311)
376 3r3s_A Oxidoreductase; structu 31.7 29 0.00099 33.4 3.4 30 2-37 50-79 (294)
377 1d7o_A Enoyl-[acyl-carrier pro 31.5 37 0.0013 32.3 4.1 35 2-41 9-44 (297)
378 3qvo_A NMRA family protein; st 31.4 39 0.0013 30.9 4.1 35 1-41 23-58 (236)
379 3pgx_A Carveol dehydrogenase; 31.4 31 0.001 32.7 3.4 32 2-39 16-47 (280)
380 3tox_A Short chain dehydrogena 31.3 25 0.00085 33.7 2.8 31 2-38 9-39 (280)
381 2wyu_A Enoyl-[acyl carrier pro 31.2 37 0.0013 31.7 4.0 32 2-38 9-41 (261)
382 2c20_A UDP-glucose 4-epimerase 31.0 46 0.0016 31.6 4.7 32 1-38 1-32 (330)
383 1oaa_A Sepiapterin reductase; 31.0 31 0.001 32.1 3.3 31 2-38 7-40 (259)
384 4eaq_A DTMP kinase, thymidylat 30.9 36 0.0012 31.8 3.8 31 2-35 27-57 (229)
385 1odf_A YGR205W, hypothetical 3 30.9 39 0.0013 33.0 4.2 41 2-44 32-75 (290)
386 1a7j_A Phosphoribulokinase; tr 30.7 31 0.0011 33.6 3.4 41 2-44 6-46 (290)
387 2rh8_A Anthocyanidin reductase 30.4 51 0.0017 31.5 4.9 34 2-41 10-43 (338)
388 2wtz_A UDP-N-acetylmuramoyl-L- 30.3 51 0.0017 34.9 5.3 32 2-37 147-178 (535)
389 3oig_A Enoyl-[acyl-carrier-pro 30.3 41 0.0014 31.3 4.1 31 2-37 8-39 (266)
390 3r6d_A NAD-dependent epimerase 30.0 50 0.0017 29.6 4.5 34 1-40 5-39 (221)
391 1jtv_A 17 beta-hydroxysteroid 29.9 27 0.00093 34.3 2.9 30 2-37 3-32 (327)
392 3e48_A Putative nucleoside-dip 29.8 46 0.0016 31.1 4.4 34 1-41 1-35 (289)
393 2c29_D Dihydroflavonol 4-reduc 29.6 47 0.0016 31.8 4.5 34 2-41 6-39 (337)
394 3rft_A Uronate dehydrogenase; 29.6 28 0.00096 32.6 2.8 35 1-41 3-37 (267)
395 3kvo_A Hydroxysteroid dehydrog 29.4 33 0.0011 34.2 3.4 32 2-39 46-77 (346)
396 1y63_A LMAJ004144AAA protein; 29.3 34 0.0012 30.2 3.2 22 2-25 11-32 (184)
397 4fb5_A Probable oxidoreductase 29.2 29 0.001 34.0 3.0 14 296-310 24-37 (393)
398 2grj_A Dephospho-COA kinase; T 29.2 41 0.0014 30.7 3.8 33 2-42 13-46 (192)
399 3k4h_A Putative transcriptiona 29.1 1.5E+02 0.0052 27.1 7.8 31 361-397 68-98 (292)
400 1jlj_A Gephyrin; globular alph 29.1 75 0.0026 29.2 5.6 66 89-166 34-103 (189)
401 3bch_A 40S ribosomal protein S 29.0 93 0.0032 30.4 6.4 76 299-398 106-181 (253)
402 3h75_A Periplasmic sugar-bindi 28.9 90 0.0031 30.0 6.4 32 362-398 62-93 (350)
403 3gdg_A Probable NADP-dependent 28.5 38 0.0013 31.5 3.5 31 2-37 21-52 (267)
404 2pk3_A GDP-6-deoxy-D-LYXO-4-he 28.5 55 0.0019 30.9 4.7 35 1-41 12-46 (321)
405 3d02_A Putative LACI-type tran 28.3 2.4E+02 0.0082 25.9 9.1 34 361-398 60-93 (303)
406 2rgy_A Transcriptional regulat 28.3 1.8E+02 0.0061 26.9 8.2 32 361-398 66-97 (290)
407 3d7l_A LIN1944 protein; APC893 28.2 54 0.0019 28.8 4.4 33 1-41 4-36 (202)
408 3u3x_A Oxidoreductase; structu 28.1 43 0.0015 33.4 4.0 69 297-371 26-97 (361)
409 1yrb_A ATP(GTP)binding protein 27.9 71 0.0024 29.4 5.2 39 3-44 16-54 (262)
410 3kkj_A Amine oxidase, flavin-c 27.8 33 0.0011 29.6 2.7 28 15-42 9-36 (336)
411 4amg_A Snogd; transferase, pol 27.8 41 0.0014 32.8 3.7 37 1-40 23-59 (400)
412 4hv4_A UDP-N-acetylmuramate--L 27.6 3E+02 0.01 28.6 10.6 29 298-330 23-52 (494)
413 2gk4_A Conserved hypothetical 27.5 40 0.0014 32.4 3.5 39 2-40 4-52 (232)
414 3i4f_A 3-oxoacyl-[acyl-carrier 27.5 53 0.0018 30.4 4.3 31 1-37 7-37 (264)
415 2if2_A Dephospho-COA kinase; a 27.3 38 0.0013 30.1 3.1 23 1-25 1-23 (204)
416 3e70_C DPA, signal recognition 27.0 86 0.003 31.2 6.0 39 2-42 130-168 (328)
417 3da7_A Barnase circular permut 26.8 46 0.0016 28.7 3.3 28 54-92 26-53 (111)
418 2x7x_A Sensor protein; transfe 26.8 3.6E+02 0.012 25.3 10.3 33 361-397 61-93 (325)
419 3kjx_A Transcriptional regulat 26.6 3E+02 0.01 26.2 9.7 31 361-397 123-153 (344)
420 2qt1_A Nicotinamide riboside k 26.1 37 0.0013 30.4 2.8 37 2-44 22-58 (207)
421 2f6r_A COA synthase, bifunctio 26.1 43 0.0015 32.2 3.5 34 1-42 75-108 (281)
422 3qk7_A Transcriptional regulat 25.9 1.8E+02 0.006 27.1 7.7 32 361-398 64-95 (294)
423 3grk_A Enoyl-(acyl-carrier-pro 25.9 53 0.0018 31.5 4.1 31 2-37 32-63 (293)
424 1rrv_A Glycosyltransferase GTF 25.8 61 0.0021 32.1 4.7 38 1-41 1-38 (416)
425 4id9_A Short-chain dehydrogena 25.8 54 0.0019 31.4 4.2 34 2-41 20-53 (347)
426 2fn9_A Ribose ABC transporter, 25.8 2.8E+02 0.0094 25.3 9.0 33 361-397 57-89 (290)
427 2bd0_A Sepiapterin reductase; 25.7 43 0.0015 30.5 3.3 25 2-32 3-27 (244)
428 3eag_A UDP-N-acetylmuramate:L- 25.6 2.7E+02 0.0093 27.1 9.3 29 298-330 5-34 (326)
429 1udb_A Epimerase, UDP-galactos 25.5 65 0.0022 30.7 4.6 28 4-37 3-30 (338)
430 2vk2_A YTFQ, ABC transporter p 25.4 2.3E+02 0.0078 26.4 8.4 33 361-397 57-89 (306)
431 3awd_A GOX2181, putative polyo 25.3 64 0.0022 29.6 4.4 30 2-37 14-43 (260)
432 4hv4_A UDP-N-acetylmuramate--L 25.2 67 0.0023 33.6 5.0 57 2-64 123-179 (494)
433 3kbq_A Protein TA0487; structu 25.1 1.4E+02 0.0047 27.2 6.5 83 312-409 24-107 (172)
434 2lpm_A Two-component response 25.0 1.3E+02 0.0046 25.4 6.1 75 296-395 7-83 (123)
435 2vfb_A Arylamine N-acetyltrans 25.0 84 0.0029 30.7 5.4 53 22-74 76-133 (280)
436 3o74_A Fructose transport syst 24.9 2.2E+02 0.0076 25.6 8.1 32 361-397 57-88 (272)
437 3bbl_A Regulatory protein of L 24.9 1.2E+02 0.0043 27.9 6.4 32 361-398 63-94 (287)
438 3eag_A UDP-N-acetylmuramate:L- 24.6 1.1E+02 0.0037 30.0 6.2 59 2-64 109-174 (326)
439 3ic5_A Putative saccharopine d 24.3 84 0.0029 24.7 4.4 33 2-41 6-39 (118)
440 3brq_A HTH-type transcriptiona 24.2 3.3E+02 0.011 24.7 9.2 31 361-397 76-107 (296)
441 4fs3_A Enoyl-[acyl-carrier-pro 24.2 67 0.0023 30.2 4.4 31 2-37 7-38 (256)
442 3sc6_A DTDP-4-dehydrorhamnose 24.2 35 0.0012 31.9 2.3 33 1-39 4-37 (287)
443 2q1w_A Putative nucleotide sug 24.1 78 0.0027 30.4 4.9 34 1-40 21-54 (333)
444 3m2p_A UDP-N-acetylglucosamine 24.1 70 0.0024 30.2 4.5 33 2-40 3-35 (311)
445 2fep_A Catabolite control prot 24.1 3.4E+02 0.012 25.0 9.3 32 361-398 71-102 (289)
446 1u7z_A Coenzyme A biosynthesis 23.9 46 0.0016 31.8 3.1 32 2-38 9-55 (226)
447 1t2a_A GDP-mannose 4,6 dehydra 23.9 78 0.0027 30.8 4.9 33 2-40 25-57 (375)
448 2p4h_X Vestitone reductase; NA 23.8 70 0.0024 30.1 4.5 31 2-38 2-32 (322)
449 3p94_A GDSL-like lipase; serin 23.8 56 0.0019 28.4 3.5 60 118-185 59-125 (204)
450 3trf_A Shikimate kinase, SK; a 23.8 59 0.002 28.3 3.6 24 2-27 6-29 (185)
451 2ehd_A Oxidoreductase, oxidore 23.6 71 0.0024 28.9 4.3 32 2-39 6-37 (234)
452 4gqa_A NAD binding oxidoreduct 23.6 1E+02 0.0036 30.9 5.9 25 295-323 24-48 (412)
453 3d3w_A L-xylulose reductase; u 23.5 74 0.0025 28.9 4.4 32 2-39 8-39 (244)
454 3f9i_A 3-oxoacyl-[acyl-carrier 23.5 68 0.0023 29.4 4.2 31 2-38 15-45 (249)
455 1w5r_A Arylamine N-acetyltrans 23.4 86 0.003 30.5 5.1 53 22-74 79-136 (278)
456 1ek6_A UDP-galactose 4-epimera 23.4 67 0.0023 30.7 4.3 30 2-37 3-32 (348)
457 1ooe_A Dihydropteridine reduct 23.2 85 0.0029 28.6 4.8 34 2-41 4-37 (236)
458 3ruf_A WBGU; rossmann fold, UD 23.2 84 0.0029 30.1 4.9 33 2-40 26-58 (351)
459 3o9z_A Lipopolysaccaride biosy 23.0 2.6E+02 0.0089 27.0 8.6 27 297-327 3-30 (312)
460 2p2s_A Putative oxidoreductase 22.9 99 0.0034 30.0 5.5 68 297-370 4-74 (336)
461 1uay_A Type II 3-hydroxyacyl-C 22.8 79 0.0027 28.4 4.4 34 2-41 3-36 (242)
462 1kew_A RMLB;, DTDP-D-glucose 4 22.8 77 0.0026 30.5 4.6 33 1-40 1-34 (361)
463 3vps_A TUNA, NAD-dependent epi 22.7 79 0.0027 29.6 4.6 33 2-40 8-40 (321)
464 3e61_A Putative transcriptiona 22.7 2E+02 0.0068 26.1 7.3 29 361-397 63-92 (277)
465 2h3h_A Sugar ABC transporter, 22.6 2.8E+02 0.0095 25.9 8.5 34 361-398 56-89 (313)
466 3lw7_A Adenylate kinase relate 22.4 71 0.0024 26.7 3.8 27 2-34 2-28 (179)
467 1n7h_A GDP-D-mannose-4,6-dehyd 22.4 84 0.0029 30.7 4.8 33 2-40 29-61 (381)
468 1jjv_A Dephospho-COA kinase; P 22.4 69 0.0023 28.5 3.9 27 1-33 2-28 (206)
469 3e8x_A Putative NAD-dependent 22.4 88 0.003 28.2 4.7 34 2-41 22-55 (236)
470 1uz5_A MOEA protein, 402AA lon 22.3 81 0.0028 32.5 4.9 45 111-166 226-271 (402)
471 2b69_A UDP-glucuronate decarbo 22.3 78 0.0027 30.4 4.5 33 1-39 27-59 (343)
472 1sb8_A WBPP; epimerase, 4-epim 22.3 86 0.0029 30.2 4.8 33 1-39 27-59 (352)
473 3d3q_A TRNA delta(2)-isopenten 22.1 1E+02 0.0035 31.1 5.5 44 2-52 8-54 (340)
474 1xg5_A ARPG836; short chain de 22.1 79 0.0027 29.6 4.4 32 2-39 33-64 (279)
475 1f0k_A MURG, UDP-N-acetylgluco 22.1 77 0.0026 30.2 4.4 35 1-40 7-43 (364)
476 2ydy_A Methionine adenosyltran 22.0 74 0.0025 30.0 4.2 32 2-39 3-34 (315)
477 3u5c_A 40S ribosomal protein S 21.9 2E+02 0.0068 28.1 7.2 96 299-418 72-187 (252)
478 3oml_A GH14720P, peroxisomal m 21.9 44 0.0015 36.1 2.8 31 2-38 20-50 (613)
479 1qf9_A UMP/CMP kinase, protein 21.8 67 0.0023 27.7 3.6 25 1-27 6-30 (194)
480 3e9n_A Putative short-chain de 21.8 42 0.0014 30.9 2.3 30 2-38 6-35 (245)
481 3nbm_A PTS system, lactose-spe 21.8 2.4E+02 0.0082 23.6 6.9 79 295-398 4-85 (108)
482 4h08_A Putative hydrolase; GDS 21.5 85 0.0029 27.5 4.3 47 137-186 72-123 (200)
483 2fvy_A D-galactose-binding per 21.5 4.5E+02 0.015 24.0 9.6 34 361-398 58-91 (309)
484 4fzr_A SSFS6; structural genom 21.4 63 0.0022 31.6 3.7 36 1-39 16-51 (398)
485 3egc_A Putative ribose operon 21.4 1.5E+02 0.0051 27.3 6.2 12 361-372 63-74 (291)
486 3h4t_A Glycosyltransferase GTF 21.4 70 0.0024 31.8 4.1 35 1-38 1-35 (404)
487 3e9m_A Oxidoreductase, GFO/IDH 21.3 57 0.0019 31.9 3.3 24 296-323 4-27 (330)
488 2r47_A Uncharacterized protein 21.3 18 0.00061 33.1 -0.3 104 280-399 15-125 (157)
489 2qgz_A Helicase loader, putati 21.3 67 0.0023 31.4 3.8 61 2-64 153-223 (308)
490 3kzv_A Uncharacterized oxidore 21.2 48 0.0016 30.8 2.7 29 2-36 3-33 (254)
491 3afn_B Carbonyl reductase; alp 21.2 90 0.0031 28.3 4.5 31 2-38 8-38 (258)
492 2pnf_A 3-oxoacyl-[acyl-carrier 21.2 82 0.0028 28.5 4.2 31 2-38 8-38 (248)
493 3o1i_D Periplasmic protein TOR 21.2 2.9E+02 0.0098 25.3 8.1 32 361-397 62-93 (304)
494 1rj9_A FTSY, signal recognitio 21.2 92 0.0031 30.6 4.8 38 3-42 104-141 (304)
495 3otg_A CALG1; calicheamicin, T 21.1 65 0.0022 31.4 3.7 36 1-39 21-56 (412)
496 3j20_B 30S ribosomal protein S 21.1 1.5E+02 0.005 28.0 6.0 76 299-398 66-141 (202)
497 1iir_A Glycosyltransferase GTF 21.1 94 0.0032 30.8 5.0 39 1-42 1-39 (415)
498 3fwz_A Inner membrane protein 21.1 54 0.0019 27.7 2.8 26 17-42 16-41 (140)
499 3lt0_A Enoyl-ACP reductase; tr 21.0 67 0.0023 31.3 3.8 35 2-41 3-38 (329)
500 4eyg_A Twin-arginine transloca 21.0 4.5E+02 0.015 24.7 9.7 91 295-398 4-103 (368)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2e-180 Score=1433.42 Aligned_cols=467 Identities=46% Similarity=0.787 Sum_probs=448.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ 160 (498)
+||++||+||||||++||+|||+|||||||||||||||||||+||+++|+ ..+|||||||||||||||||+|||
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999995 468999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 010866 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (498)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~ 240 (498)
||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||+|||||++++++++|+|+||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHHhcCCCCCCChhhHHHHHHHHhhhc--CCCCCeEEEEEcccCCccchHHHHHH
Q 010866 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 318 (498)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~il~~l~l~~~~~~~~l~~W~~lv~~v~--~~~~~v~IaIVgkY~~l~day~SI~~ 318 (498)
||+++|+||||++|++||+||+++.++++|+|+ .+.+++++|+++++++. ++.++++||+||||.++.|||.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999999999999999997 35678999999999998 88889999999999999999999999
Q ss_pred HHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 319 AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
||+|+|.++.++|++.||++++++.++. ++|+.+.++|||++|||||+++.+++++++++++++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998865332 12467889999999999999988999999999999999999999
Q ss_pred HHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCc-cCcCCcccccCcEeEEEeeCchHHHHhhCCCee-----
Q 010866 399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLFICGFN----- 472 (498)
Q Consensus 399 lGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~-~~~~G~tmrlG~~~v~i~~g~S~l~~iYg~~~i----- 472 (498)
+|||+|++||||+++|+++++|+||++++++|++.+|++++ ..++|+|||+|+|+|.+.+| |+++++||++.+
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG~~~I~erHr 465 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYGKKVVYERHR 465 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHTSSEEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhCCCeeeeccc
Confidence 99999999999999999999999999999999999999865 57899999999999999999 999999998876
Q ss_pred ---EEeccccccccc
Q 010866 473 ---YVEIIISKANME 484 (498)
Q Consensus 473 ---~vnslh~q~~~~ 484 (498)
.||+.|.|++-.
T Consensus 466 HryeVNs~h~q~l~~ 480 (535)
T 3nva_A 466 HRYEVNPKYVDILED 480 (535)
T ss_dssp ECCEECHHHHHHHHH
T ss_pred ccceechHHHhhccc
Confidence 699999999853
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=2.6e-148 Score=1199.31 Aligned_cols=464 Identities=49% Similarity=0.823 Sum_probs=432.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||||||||||+||+|||+++||||+||++|||+|+++|+||||||||||||||||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ 160 (498)
.|+++||+||||||++||+|||+|||||+||||+||||||||+||+++++ ..++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999984 457999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 010866 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (498)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~ 240 (498)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHHhcCCCCCCChhhHHHHHHHHhhhcCCCCCeEEEEEcccCCccchHHHHHHHH
Q 010866 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (498)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~il~~l~l~~~~~~~~l~~W~~lv~~v~~~~~~v~IaIVgkY~~l~day~SI~~AL 320 (498)
||++.||||||+||++||+||+|++++++++++ ...+++..|.+++.++.++.++++|+++|||..+.|+|.|+.+||
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999999999999999986 345678899999999988888899999999998999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeehHH
Q 010866 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 321 ~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
.+++.+..+++++.|+++++++.++ +++.+.++||||||||||+++.+++++++++++++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999988888999999886654211 235678899999999999998889999999999999999999999
Q ss_pred HHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCC-ccCcCCcccccCcEeEEEeeCchHHHHhhCCCee-------
Q 010866 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLFICGFN------- 472 (498)
Q Consensus 401 mQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~-~~~~~G~tmrlG~~~v~i~~g~S~l~~iYg~~~i------- 472 (498)
||+|++++||++++|+++|+.||++.+++|++.+++++ +++++|++||+|+|+|.+.++ |+++++|+++.+
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~~~~v~e~h~H~ 472 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYGKEEVLERHRHR 472 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHCCSEEEEEEEES
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcCCceeeeeccce
Confidence 99999999999999999999999988899999988864 588999999999999999998 999999998765
Q ss_pred -EEecccccccc
Q 010866 473 -YVEIIISKANM 483 (498)
Q Consensus 473 -~vnslh~q~~~ 483 (498)
.||+.|.|..-
T Consensus 473 Y~Vns~~~~~l~ 484 (550)
T 1vco_A 473 YEVNPLYVDGLE 484 (550)
T ss_dssp EEECHHHHHHHH
T ss_pred EEEchHHhhccc
Confidence 58898887653
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=9.8e-146 Score=1178.17 Aligned_cols=460 Identities=48% Similarity=0.800 Sum_probs=428.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||||||||||+||+|||+++||||+||++|||+|+++|+||||||||||||||||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ 160 (498)
.|+++||+|+||+|++||+|||+|+|+|+|||++||+|||||+||+++++ ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999983 7899999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 010866 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (498)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~ 240 (498)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHHhcCCCCCCChhhHHHHHHHHhhhcCCCCCeEEEEEcccCCccchHHHHHHHH
Q 010866 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (498)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~il~~l~l~~~~~~~~l~~W~~lv~~v~~~~~~v~IaIVgkY~~l~day~SI~~AL 320 (498)
||+++||||||+||++||+||+|++++++++++ ...+++.+|.++++++++++..++||++|||..+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999986 245688899999999999888899999999999999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeehHH
Q 010866 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 321 ~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
.++|+++.+.+++.|+++++++.+ +++.+.++||||||||||++...++++++++++++++|+||||+|
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999888888999987654210 113467899999999999998889999999999999999999999
Q ss_pred HHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeC----------CCC-ccCcCCcccccCcEeEEEeeCchHHHHhhCC
Q 010866 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLFIC 469 (498)
Q Consensus 401 mQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~----------~e~-~~~~~G~tmrlG~~~v~i~~g~S~l~~iYg~ 469 (498)
||+|++||||++++|+++|+.||++.++||++.++ +++ ...++|++||+|+|+|.+.++ |+++++|++
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg~ 460 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYNA 460 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTTS
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcCC
Confidence 99999999999999999999999988899999988 443 356889999999999999999 999999998
Q ss_pred Cee--------EEeccccccc
Q 010866 470 GFN--------YVEIIISKAN 482 (498)
Q Consensus 470 ~~i--------~vnslh~q~~ 482 (498)
..+ .||+.|.|++
T Consensus 461 ~~v~e~h~Hry~VNs~~~~~l 481 (545)
T 1s1m_A 461 PTIVERHRHRYEVNNMLLKQI 481 (545)
T ss_dssp SEEEEEEEECCEECHHHHHHH
T ss_pred ceEEEecCcceEEChHHhhhc
Confidence 764 5888888865
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=5.9e-144 Score=1054.67 Aligned_cols=272 Identities=67% Similarity=1.118 Sum_probs=229.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||||||||||+|||||||+|||||+|||+|||+|++||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ 160 (498)
+|+++||+||||||++||+|||||||||||||||||||||||+||+++|++|||++..+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 010866 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (498)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~ 240 (498)
||+||||+++|++|+||||||||||++++||+||||||||||+|||.|||||+|+|||+.+++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHHhcCC
Q 010866 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272 (498)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~il~~l~l 272 (498)
||+++|++++|++|++|++||+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999875
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=2.1e-142 Score=1051.07 Aligned_cols=273 Identities=66% Similarity=1.114 Sum_probs=231.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||||||||||+|||||||+|||||+|||+|||+|+++|||||||||||||||||||||||||||+||||||||||||+|+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ 160 (498)
+|+++||+||||||++||+|||+|||||||||||||||||||+||+++|.+|+|++..+|||||||||||||||||+|||
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCC
Q 010866 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (498)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~ 240 (498)
||+||||+++|++|+||||||||||++++||+||||||||||+|||.|||||+|||||+.+++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHHhcCCC
Q 010866 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 273 (498)
Q Consensus 241 Vi~i~dVdTrY~lpl~LreqG~~~~il~~l~l~ 273 (498)
||+++|++|+|+||+.|++||+++.++++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999885
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.96 E-value=3.2e-30 Score=258.84 Aligned_cols=196 Identities=47% Similarity=0.709 Sum_probs=158.6
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc
Q 010866 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK 361 (498)
Q Consensus 282 ~~W~~lv~~v~~~~~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~ 361 (498)
.-|+.+++++.++..+++|+++++|....++|.|+.++|+++|+.+...+.+.|+++++++...+..+++.|+++|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (289)
T 2v4u_A 10 GVDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLC 89 (289)
T ss_dssp -------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHh
Confidence 35999999998888889999998895577789999999999999888888899999876543222235666788888888
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccC
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 441 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~ 441 (498)
++||||||||||++...+.+++++++++.++|+||||+|||+|+.++||+++|++++++.|++++.++|++.++++....
T Consensus 90 ~~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~ 169 (289)
T 2v4u_A 90 KADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPG 169 (289)
T ss_dssp HCSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTT
T ss_pred hCCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhccc
Confidence 99999999999998778899999999999999999999999999999999999999888888887788988888865555
Q ss_pred cCCcccccCcEeEEEe-eCchHHHHhhCCCeeEEecccc
Q 010866 442 HMGGTMRLGSRRTYFQ-IKDCKSAKLFICGFNYVEIIIS 479 (498)
Q Consensus 442 ~~G~tmrlG~~~v~i~-~g~S~l~~iYg~~~i~vnslh~ 479 (498)
++|++|++|++++.+. ++ |.++++|+.+ ..|++.|+
T Consensus 170 ~~~~~~~~g~~~v~~~~~~-s~l~~~~~~~-~~v~~~H~ 206 (289)
T 2v4u_A 170 NLGGTMRLGIRRTVFKTEN-SILRKLYGDV-PFIEERHR 206 (289)
T ss_dssp CSSCBCEEEEEEEEESCSC-CHHHHHTTSC-SEEEEEEE
T ss_pred ccCCccccceEEEEEecCC-CHHHHhcCCC-ceEEEecc
Confidence 6789999999999997 78 9999999975 78999997
No 7
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.96 E-value=3.6e-31 Score=275.31 Aligned_cols=208 Identities=19% Similarity=0.253 Sum_probs=159.3
Q ss_pred EeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhcccCccCCCCCCCeeecCCCCccchhhHHHHH
Q 010866 180 VSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRD 259 (498)
Q Consensus 180 ~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~~l~s~~r~KisLf~~v~~~~Vi~i~dVdTrY~lpl~Lre 259 (498)
+.--|.|...|=-+ .+.||.+|++.++|||+.++.|||||++.||.+||++++|+||.+|||| +|+++||+
T Consensus 53 ~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~iR~ 123 (379)
T 1a9x_B 53 TLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLLRE 123 (379)
T ss_dssp EECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHHHH
T ss_pred EEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHHHh
Confidence 33456676655422 3689999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhHHHHHHhc-CCCCCCChhhHHHHH-----HHHhhhcCC-------CC----------------CeEEEEEcccCCcc
Q 010866 260 QKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDGL-------HE----------------PVRIAMVGKYTGLS 310 (498)
Q Consensus 260 qG~~~~il~~l-~l~~~~~~~~l~~W~-----~lv~~v~~~-------~~----------------~v~IaIVgkY~~l~ 310 (498)
+|+|+++|... ..+..+..+.+..|. +++..+++. .. ..+|+++| |+
T Consensus 124 ~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~viD-~G--- 199 (379)
T 1a9x_B 124 KGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYD-FG--- 199 (379)
T ss_dssp HCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEEE-SS---
T ss_pred cCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEEE-CC---
Confidence 99999988653 111100011233442 455555431 11 46899997 86
Q ss_pred chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHh-ccCCCEEEEcCCCCCCC-chhHHHHHHHHH
Q 010866 311 DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-LKGADGILVPGGFGNRG-VQGKILAAKYAR 388 (498)
Q Consensus 311 day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~-l~~~DGIilpGG~g~~~-~~g~i~~i~~a~ 388 (498)
...|+.++|+.+|+.+.+. +.+.- + .+. ..++||||||||||++. ....++++++++
T Consensus 200 -~k~ni~r~L~~~G~~v~vv------p~~~~--------~------e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~ 258 (379)
T 1a9x_B 200 -AKRNILRMLVDRGCRLTIV------PAQTS--------A------EDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFL 258 (379)
T ss_dssp -CCHHHHHHHHHTTEEEEEE------ETTCC--------H------HHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHT
T ss_pred -ChHHHHHHHHHCCCEEEEE------eccCC--------H------HHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHH
Confidence 4578999999999876654 32210 0 011 23699999999999984 467889999999
Q ss_pred HcCCCEEeehHHHHHHHHHhcchhcccCCCCCC
Q 010866 389 EHRIPYLGICLGMQVAVIEFARSVLNLRDANST 421 (498)
Q Consensus 389 e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~ 421 (498)
+.++|+||||+|||+|+.|+|+++++++++|+.
T Consensus 259 ~~~~PILGIClG~QLLa~A~GG~v~k~~~gh~g 291 (379)
T 1a9x_B 259 ETDIPVFGICLGHQLLALASGAKTVKMKFGHHG 291 (379)
T ss_dssp TSCCCEEEETHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred HcCCCEEEECchHHHHHHHhCcEEEeccccccc
Confidence 989999999999999999999999998877654
No 8
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.93 E-value=1.3e-26 Score=230.85 Aligned_cols=173 Identities=43% Similarity=0.677 Sum_probs=143.3
Q ss_pred CeEEEEEccc-CCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC
Q 010866 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (498)
Q Consensus 297 ~v~IaIVgkY-~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~ 375 (498)
+++|||+|+| ..+.|+|.|+.++|+++|.++.+.+++.|+++++++..+ . ...++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~----~---~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPN----A---DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTT----T---HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhccccc----c---hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999999 467789999999999999988888899999987654311 0 0022457789999999999998
Q ss_pred CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEeEE
Q 010866 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (498)
Q Consensus 376 ~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~v~ 455 (498)
...+.++++++++++++|+||||+|||+|+++|||++.+++++++.|+++++++|++.+++ .....++++|++|+|++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 7778899999999999999999999999999999999999999888988777778776663 333445668899999999
Q ss_pred Ee-eCchHHHHhhCCCeeEEecccc
Q 010866 456 FQ-IKDCKSAKLFICGFNYVEIIIS 479 (498)
Q Consensus 456 i~-~g~S~l~~iYg~~~i~vnslh~ 479 (498)
+. ++ |.++++|+.. ..+++.|.
T Consensus 160 ~~~~~-s~l~~~~~~~-~~v~~~H~ 182 (273)
T 2w7t_A 160 IVEKS-SIMAKIYSKS-NIVVERHR 182 (273)
T ss_dssp ECCTT-SHHHHHTTTC-SEEEEEEE
T ss_pred EecCC-cHHHHHhCCC-ceEEeecc
Confidence 97 48 8999999854 67899886
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.71 E-value=4.3e-17 Score=160.05 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=103.8
Q ss_pred CeEEEEEcccCC----------ccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEE
Q 010866 297 PVRIAMVGKYTG----------LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGI 366 (498)
Q Consensus 297 ~v~IaIVgkY~~----------l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGI 366 (498)
++.|||...+.. ..-.+.+.+++|+.+|+.+.+. +..+-. . ..+.+..+|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~l------p~~~~~-----------~-~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIAL------PIDDPS-----------T-AVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEEE------CCCCGG-----------G-HHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEEE------eCCCch-----------H-HHHHHhhCCEE
Confidence 357888864311 0012357899999999877653 332110 0 12457789999
Q ss_pred EEcCCCC-CC---------Cc--------hhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCC
Q 010866 367 LVPGGFG-NR---------GV--------QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTK 428 (498)
Q Consensus 367 ilpGG~g-~~---------~~--------~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~ 428 (498)
|||||++ +| .. ..+++++++++++++|+||||+|||+|++++||++++... .. .
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~--~~-~----- 137 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQDIS--QV-E----- 137 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESSGG--GS-S-----
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecccc--cc-c-----
Confidence 9999976 11 10 2378899999999999999999999999999999975321 11 0
Q ss_pred CCeeeeCCCCccCcCC-cccccCcEeEEEeeCchHHHHhhCCCeeEEecccccccc
Q 010866 429 NPCVIFMPEGSKTHMG-GTMRLGSRRTYFQIKDCKSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 429 ~~vi~l~~e~~~~~~G-~tmrlG~~~v~i~~g~S~l~~iYg~~~i~vnslh~q~~~ 483 (498)
.+.+. |+. ..+++|+|++.+.++ |.+++.|+. .+.||++|+|++-
T Consensus 138 ~~~~~--------h~~~~~~~~g~~~v~~~~~-s~l~~~~~~-~~~v~~~H~~~v~ 183 (254)
T 3fij_A 138 TKALQ--------HLQRVDEQLGSHTIDIEPT-SELAKHHPN-KKLVNSLHHQFIK 183 (254)
T ss_dssp SCCCC--------CBCCSCTTSCCEEEEECTT-SSGGGTCCT-TEEECCBCSCEES
T ss_pred Ccccc--------ccCCCCCccceEEEEeCCC-ChHHHhcCC-cEEEEEeccchhh
Confidence 01111 111 245788999999999 899999987 7899999999874
No 10
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.62 E-value=3.4e-16 Score=148.13 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=88.5
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC-c
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG-V 377 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~-~ 377 (498)
+|+||| |+ .+ +..||.+||+++|+++.+. ++| +.+.++|||||||| |.+. .
T Consensus 4 ~I~iiD-~g-~~-n~~si~~al~~~G~~~~v~-----------------~~~-------~~l~~~D~lilPG~-g~~~~~ 55 (211)
T 4gud_A 4 NVVIID-TG-CA-NISSVKFAIERLGYAVTIS-----------------RDP-------QVVLAADKLFLPGV-GTASEA 55 (211)
T ss_dssp CEEEEC-CC-CT-THHHHHHHHHHTTCCEEEE-----------------CCH-------HHHHHCSEEEECCC-SCHHHH
T ss_pred EEEEEE-CC-CC-hHHHHHHHHHHCCCEEEEE-----------------CCH-------HHHhCCCEEEECCC-CCHHHH
Confidence 699997 98 44 7899999999999987753 122 56778999999964 4432 1
Q ss_pred -h--hHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCC-CccCcCCcccccCcEe
Q 010866 378 -Q--GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 453 (498)
Q Consensus 378 -~--g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e-~~~~~~G~tmrlG~~~ 453 (498)
. .....++.+++.++|+||||+|||+|+.++|+++.+....+.. -...+.+|..+... ...++++| ..
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~~~g--l~~~~~~v~~~~~~~~~~~~~~~------~~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEIVQC--LGLVDGEVRLLQTGDLPLPHMGW------NT 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCCEEC--CCSSSCEEEECCCTTSCSSEEEE------EC
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCcccc--ceeccceEEEcccCCcceeeccc------ee
Confidence 1 1223467778899999999999999999999998764433221 11123455544322 22334333 23
Q ss_pred EEEeeCchHHHHhhCCCeeEEeccccccc
Q 010866 454 TYFQIKDCKSAKLFICGFNYVEIIISKAN 482 (498)
Q Consensus 454 v~i~~g~S~l~~iYg~~~i~vnslh~q~~ 482 (498)
+....+ +.+.+-+. +...+...|+++.
T Consensus 128 ~~~~~~-~~l~~~l~-~~~~~~~~H~~~v 154 (211)
T 4gud_A 128 VQVKEG-HPLFNGIE-PDAYFYFVHSFAM 154 (211)
T ss_dssp CEECTT-CGGGTTCC-TTCCEEEEESEEC
T ss_pred eeeecc-ChhhcCCC-CCcEEEEEeeEEe
Confidence 344444 33433332 2345666666553
No 11
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.58 E-value=3.6e-15 Score=142.68 Aligned_cols=133 Identities=20% Similarity=0.229 Sum_probs=95.4
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCC-CCC
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 374 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG-~g~ 374 (498)
..+||.++|.|.++. .++.++|+.+|+.+.+. +.+. ++ +.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~vv------~~~~--------~~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKIV------PNDI--------DS-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCEE------ETTS--------CG-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEEE------eCCC--------CH-------HHHhCCCEEEECCCCCCC
Confidence 356899998666443 47899999999887654 3221 11 45667999999999 777
Q ss_pred CCch-hHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEe
Q 010866 375 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (498)
Q Consensus 375 ~~~~-g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~ 453 (498)
.... ......+.+++.++|+||||+|||+|+.++|+++.+.+. + ..|.++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~~-----------------------~------~~G~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKH-----------------------P------EFGKTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEEE-----------------------E------EEEEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCCC-----------------------c------ccCcee
Confidence 5221 233345666789999999999999999999999864210 1 134567
Q ss_pred EEEeeCchHHHHhhCCCeeEEecccccccc
Q 010866 454 TYFQIKDCKSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 454 v~i~~g~S~l~~iYg~~~i~vnslh~q~~~ 483 (498)
+.+.++ +.+++.++ +.+.+++.|++++.
T Consensus 119 v~~~~~-~~l~~~~~-~~~~v~~~H~~~v~ 146 (212)
T 2a9v_A 119 VSVMHS-ENIFGGLP-SEITVWENHNDEII 146 (212)
T ss_dssp EEESCC-CGGGTTCC-SEEEEEEEEEEEEE
T ss_pred eEECCC-ChhHhcCC-CceEEEeEhhhhHh
Confidence 778777 77777776 46789999999874
No 12
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.55 E-value=8.7e-15 Score=137.68 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=88.9
Q ss_pred EEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc--CCCEEEEcCCCCCCCc
Q 010866 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (498)
Q Consensus 300 IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~--~~DGIilpGG~g~~~~ 377 (498)
|+|++.+.+.. .++.++|+.+|+++.+. +.++.. + +.+. ++||||||||++.+..
T Consensus 4 i~iid~~~s~~---~~~~~~l~~~G~~~~v~------~~~~~~-------~-------~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSFV---YNIAQIVGELGSYPIVI------RNDEIS-------I-------KGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSSH---HHHHHHHHHTTCEEEEE------ETTTSC-------H-------HHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCchH---HHHHHHHHhCCCEEEEE------eCCCCC-------H-------HHHhhCCCCEEEECCCCCChhh
Confidence 99998666432 47889999999876543 322110 1 2232 6999999999988643
Q ss_pred ---h-hHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEe
Q 010866 378 ---Q-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (498)
Q Consensus 378 ---~-g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~ 453 (498)
. ...+.++++ +.++|+||||+|||+|+.++|+++.+.+.. ++.+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~~----------------------~~g~------~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARKV----------------------FHGK------ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEEE----------------------EEEE------EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCCC----------------------cCCC------ceE
Confidence 2 234677775 789999999999999999999998653210 1111 234
Q ss_pred EEEeeCch--HHHHhhCCCeeEEecccccccc
Q 010866 454 TYFQIKDC--KSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 454 v~i~~g~S--~l~~iYg~~~i~vnslh~q~~~ 483 (498)
+.+.++ + .+++.++ +.+.+++.|++++.
T Consensus 112 v~~~~~-~~~~l~~~~~-~~~~v~~~H~~~v~ 141 (195)
T 1qdl_B 112 IILVNN-SPLSLYYGIA-KEFKATRYHSLVVD 141 (195)
T ss_dssp EEECCS-SCCSTTTTCC-SEEEEEEEEEEEEE
T ss_pred EEECCC-CHhHHHhcCC-CceEEeccccchhh
Confidence 555556 5 5666665 56889999999874
No 13
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.49 E-value=9.2e-15 Score=140.74 Aligned_cols=131 Identities=15% Similarity=0.053 Sum_probs=85.5
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g~~ 375 (498)
.+|+|+| |+.- .-.++.++|+.+|+.+.+. +++.+ + +.+ .++||||||||++.+
T Consensus 25 ~~I~iiD-~g~~--~~~~i~~~l~~~G~~~~vv----~~~~~----------~-------~~l~~~~~dglil~Gg~~~~ 80 (218)
T 2vpi_A 25 GAVVILD-AGAQ--YGKVIDRRVRELFVQSEIF----PLETP----------A-------FAIKEQGFRAIIISGGPNSV 80 (218)
T ss_dssp TCEEEEE-CSTT--TTHHHHHHHHHTTCCEEEE----CTTCC----------H-------HHHHHHTCSEEEEEC-----
T ss_pred CeEEEEE-CCCc--hHHHHHHHHHHCCCEEEEE----ECCCC----------h-------HHHhhcCCCEEEECCCCccc
Confidence 3799997 6521 2358999999999876653 22211 1 122 569999999998764
Q ss_pred CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEeEE
Q 010866 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (498)
Q Consensus 376 ~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~v~ 455 (498)
.........+.+++.++|+||||+|||+|+.++||++.+++. + ..|.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-----------------------~------~~G~~~v~ 131 (218)
T 2vpi_A 81 YAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------R------EDGVFNIS 131 (218)
T ss_dssp ----CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------C------SCEEEEEE
T ss_pred ccccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCC-----------------------C------cccEEEEE
Confidence 211111122344578999999999999999999999865321 0 12356778
Q ss_pred EeeCchHHHHhhCCCeeEEecccccccc
Q 010866 456 FQIKDCKSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 456 i~~g~S~l~~iYg~~~i~vnslh~q~~~ 483 (498)
+.++ +.+++.++. ...+++.|++++-
T Consensus 132 ~~~~-~~l~~~l~~-~~~v~~~H~~~v~ 157 (218)
T 2vpi_A 132 VDNT-CSLFRGLQK-EEVVLLTHGDSVD 157 (218)
T ss_dssp ECTT-SGGGTTCCS-EEEEEECSEEEES
T ss_pred EccC-ChhHhcCCC-CcEEeehhhhHhh
Confidence 8888 778887764 5689999999974
No 14
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.48 E-value=1.4e-13 Score=133.96 Aligned_cols=138 Identities=17% Similarity=0.136 Sum_probs=93.5
Q ss_pred CCCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCC
Q 010866 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (498)
Q Consensus 295 ~~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~ 374 (498)
...++|.++-.+. .. +..++.++|+..|+.+.+. ..+. .+ . .| +.+.++||||||||++.
T Consensus 10 ~~~~~~~~i~~~~-~~-~~~~i~~~l~~~G~~v~v~----~~~~--~~--~---~~-------~~l~~~Dglil~GG~~~ 69 (239)
T 1o1y_A 10 HHHVRVLAIRHVE-IE-DLGMMEDIFREKNWSFDYL----DTPK--GE--K---LE-------RPLEEYSLVVLLGGYMG 69 (239)
T ss_dssp CCCCEEEEECSST-TS-SCTHHHHHHHHTTCEEEEE----CGGG--TC--C---CS-------SCGGGCSEEEECCCSCC
T ss_pred cceeEEEEEECCC-CC-CchHHHHHHHhCCCcEEEe----CCcC--cc--c---cc-------cchhcCCEEEECCCCcc
Confidence 3468999996543 32 4458889999999776532 2121 11 0 11 34678999999999865
Q ss_pred C-C------chhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCccc
Q 010866 375 R-G------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (498)
Q Consensus 375 ~-~------~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tm 447 (498)
+ + +....++++++.+.++|+||||+|||+|+.++|+++.+.+.+ +
T Consensus 70 ~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~g----------------------~------ 121 (239)
T 1o1y_A 70 AYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKNG----------------------E------ 121 (239)
T ss_dssp TTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTTC----------------------C------
T ss_pred ccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCCC----------------------C------
Confidence 4 1 235778899999899999999999999999999998753210 0
Q ss_pred ccCcEeEEEeeCchHHHHhhCCCeeEEeccccccc
Q 010866 448 RLGSRRTYFQIKDCKSAKLFICGFNYVEIIISKAN 482 (498)
Q Consensus 448 rlG~~~v~i~~g~S~l~~iYg~~~i~vnslh~q~~ 482 (498)
..|.+++.+.++ +.+++.++ +.+.++..|++..
T Consensus 122 ~~G~~~v~~~~~-~~l~~~~~-~~~~~~~~H~~~v 154 (239)
T 1o1y_A 122 EIGWYFVEKVSD-NKFFREFP-DRLRVFQWHGDTF 154 (239)
T ss_dssp EEEEEEEEECCC-CGGGTTSC-SEEEEEEEESEEE
T ss_pred ccccEEEEECCC-CchHHhCC-CCceeEeecCCcc
Confidence 123455555555 55666555 4567777777765
No 15
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.45 E-value=2.3e-13 Score=126.93 Aligned_cols=93 Identities=22% Similarity=0.236 Sum_probs=68.4
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCCCCC
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 376 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g~~~ 376 (498)
.|+|+|.++. ...++.++|+.+|+.+.+. +... .+ +.+ .++||||||||+ ++.
T Consensus 2 mi~iid~~~~---~~~~~~~~l~~~G~~~~~~------~~~~--------~~-------~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMDNGGQ---YVHRIWRTLRYLGVETKII------PNTT--------PL-------EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEECSCT---THHHHHHHHHHTTCEEEEE------ETTC--------CH-------HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEECCCc---hHHHHHHHHHHCCCeEEEE------ECCC--------Ch-------HHhcccCCCEEEECCCC-Chh
Confidence 4899983332 4568999999999876653 3221 01 223 369999999998 553
Q ss_pred ch-hHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccC
Q 010866 377 VQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLR 416 (498)
Q Consensus 377 ~~-g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk 416 (498)
.. ...+.++.+.+.++|+||||+|||+|+.++|+++.+++
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~ 97 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGE 97 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECS
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCC
Confidence 22 34677777768899999999999999999999998653
No 16
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.44 E-value=9.9e-14 Score=130.38 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=85.7
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcC-----CcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG-----~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~ 372 (498)
++|+|++ |+ .+ ++.|+.++|+.+| +++.+. +.. +. .++||||||||
T Consensus 1 m~I~iid-~~-~g-~~~s~~~~l~~~G~~~~~~~~~~~------~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGIIS-VG-PG-NIMNLYRGVKRASENFEDVSIELV------ESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEEC-CS-SS-CCHHHHHHHHHHSTTBSSCEEEEE------CSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEEe-cC-Cc-hHHHHHHHHHHcCCCCCceEEEEE------CCC------------------cc-cCCCEEEECCC-
Confidence 4799997 76 33 6789999999998 555432 221 23 67899999884
Q ss_pred CCCCc-------hhHHHHHHHHHHcCCCEEeehHHHHHHHHHhc--chhcccCCCCCCccCCCCCCCeeeeCCCCccCcC
Q 010866 373 GNRGV-------QGKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 443 (498)
Q Consensus 373 g~~~~-------~g~i~~i~~a~e~~iPiLGIClGmQll~va~g--~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~ 443 (498)
|++.. .+..+.++++.+.++|+||||+|||+|+.++| ++.-++.. ....+... +..+.+++
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~---------~~g~v~~~-~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSL---------IEGNVVKL-RSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCS---------SSEEEEEC-CCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcce---------eeeEEEEc-CCCCCCcc
Confidence 55321 14678889998999999999999999999987 43211110 01122221 11123344
Q ss_pred CcccccCcEeEEEeeCchHHHHhhCCCeeEEeccccccccc
Q 010866 444 GGTMRLGSRRTYFQIKDCKSAKLFICGFNYVEIIISKANME 484 (498)
Q Consensus 444 G~tmrlG~~~v~i~~g~S~l~~iYg~~~i~vnslh~q~~~~ 484 (498)
|| +++.+..+ + +...+++.|++++-+
T Consensus 122 g~------~~l~~~~~-~--------~~~~v~~~H~~~v~~ 147 (201)
T 1gpw_B 122 GW------NEVIFKDT-F--------PNGYYYFVHTYRAVC 147 (201)
T ss_dssp EE------EEEEESSS-S--------CCEEEEEEESEEEEE
T ss_pred cc------eeeEeccC-C--------CCCeEEEECcceecc
Confidence 43 45555444 3 467899999998854
No 17
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.44 E-value=5.2e-13 Score=125.10 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=66.1
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc--CCCEEEEcCCCCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~--~~DGIilpGG~g~~ 375 (498)
++|+|||.|+++ -.++.++|+.+|+++.+. +.+. .++ +..+.+. +.|++|++||+|.+
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v~----~~~~-~~~------------~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVIY----RNHI-PAQ------------TLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEEE----ETTS-CSH------------HHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEEE----ECCC-CHH------------HHHHHhhhccCCeEEECCCCcCc
Confidence 379999966643 368899999999876653 2111 110 0112222 34579999999987
Q ss_pred CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcc
Q 010866 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLN 414 (498)
Q Consensus 376 ~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~ 414 (498)
...+....+.++.+.++|+||||+|||+|+.++|+++.+
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~ 99 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQ 99 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEe
Confidence 443433444445678999999999999999999998854
No 18
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.44 E-value=3.7e-13 Score=132.61 Aligned_cols=134 Identities=13% Similarity=0.120 Sum_probs=95.3
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC---
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR--- 375 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~--- 375 (498)
+|.++. ..... ...++.++|+..|+++.+. .....+. .| +.+.++||||||||++.+
T Consensus 5 ~vliiq-h~~~e-~~~~i~~~l~~~G~~v~v~----~~~~~~~-------~p-------~~~~~~d~lIl~GGp~~~~d~ 64 (250)
T 3m3p_A 5 PVMIIQ-FSASE-GPGHFGDFLAGEHIPFQVL----RMDRSDP-------LP-------AEIRDCSGLAMMGGPMSANDD 64 (250)
T ss_dssp CEEEEE-SSSSC-CCHHHHHHHHHTTCCEEEE----EGGGTCC-------CC-------SCGGGSSEEEECCCSSCTTSC
T ss_pred eEEEEE-CCCCC-CHHHHHHHHHHCCCeEEEE----eccCCCc-------Cc-------CccccCCEEEECCCCCccccc
Confidence 677774 22222 4568889999999887654 2221110 11 246789999999999763
Q ss_pred --CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEe
Q 010866 376 --GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (498)
Q Consensus 376 --~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~ 453 (498)
.+....+.++.+.+.++|+||||+|||+|+.++||++.+.+ . +++ |.++
T Consensus 65 ~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~--------------~---------~e~------G~~~ 115 (250)
T 3m3p_A 65 LPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP--------------H---------AEI------GWVR 115 (250)
T ss_dssp CTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE--------------E---------EEE------EEEE
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC--------------C---------Cce------eeEE
Confidence 23456788898888999999999999999999999987521 0 123 3456
Q ss_pred EEEeeCchHHHHhhC-CCeeEEeccccccc
Q 010866 454 TYFQIKDCKSAKLFI-CGFNYVEIIISKAN 482 (498)
Q Consensus 454 v~i~~g~S~l~~iYg-~~~i~vnslh~q~~ 482 (498)
+.+.+. +....++| .+.+.|++.|+++.
T Consensus 116 v~~~~~-~~~~~l~g~~~~~~v~~~H~~~v 144 (250)
T 3m3p_A 116 AWPQHV-PQALEWLGTWDELELFEWHYQTF 144 (250)
T ss_dssp EEECSS-HHHHHHHSCSSCEEEEEEEEEEE
T ss_pred EEEecC-CCCcccccCCCccEEEEEcccee
Confidence 778776 55566776 46789999999986
No 19
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.39 E-value=9.8e-13 Score=127.43 Aligned_cols=97 Identities=19% Similarity=0.221 Sum_probs=70.5
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC-
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~- 376 (498)
+||+++- ..... ....+.+.|+..|+++.+. .+...+. -| +.+.++||||||||++.+.
T Consensus 1 m~i~vi~-h~~~e-~~g~~~~~l~~~g~~~~~~----~~~~~~~-------~p-------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFIL-HETFE-APGAYLAWAALRGHDVSMT----KVYRYEK-------LP-------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEEE-CCTTS-CCHHHHHHHHHTTCEEEEE----EGGGTCC-------CC-------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEEe-CCCCC-CchHHHHHHHHCCCeEEEE----eeeCCCC-------CC-------CCccccCEEEECCCCCCccc
Confidence 4677774 43232 4567788899899876653 3222110 11 2366899999999998741
Q ss_pred -------c--hhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcc
Q 010866 377 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLN 414 (498)
Q Consensus 377 -------~--~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~ 414 (498)
+ ....++++.+.+.++|+||||+|||+|+.++|+++.+
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~ 107 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLH 107 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEE
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEec
Confidence 1 2367899999999999999999999999999998864
No 20
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.38 E-value=2.8e-13 Score=147.18 Aligned_cols=153 Identities=19% Similarity=0.238 Sum_probs=94.5
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g~~ 375 (498)
-+|+|+| |+. + .-.+|.++|+.+|+.+.+. +.+ .++ +.+ .++|||||||||+++
T Consensus 8 ~~IlilD-~Gs-~-~~~~I~r~lre~Gv~~eiv----~~~-~~~----------------~~i~~~~~dgIIlsGGp~s~ 63 (556)
T 3uow_A 8 DKILVLN-FGS-Q-YFHLIVKRLNNIKIFSETK----DYG-VEL----------------KDIKDMNIKGVILSGGPYSV 63 (556)
T ss_dssp CEEEEEE-SSC-T-THHHHHHHHHHTTCCEEEE----ETT-CCG----------------GGTTTSCEEEEEECCCSCCT
T ss_pred CEEEEEE-CCC-c-cHHHHHHHHHHCCCeEEEE----ECC-CCH----------------HHHhhcCCCEEEECCCCCcc
Confidence 4799997 772 1 3469999999999887654 221 111 233 378999999999875
Q ss_pred Cchh----HHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCC-------C---CCCCeeeeCCCCccC
Q 010866 376 GVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDP-------N---TKNPCVIFMPEGSKT 441 (498)
Q Consensus 376 ~~~g----~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~-------~---~~~~vi~l~~e~~~~ 441 (498)
..++ ....++.+.+.++|+||||+|||+|+.++||++.+.. +.|++. . .++|++..+++.. +
T Consensus 64 ~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~-~ 139 (556)
T 3uow_A 64 TEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS-S 139 (556)
T ss_dssp TSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-C
T ss_pred cccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-c
Confidence 3211 2345666778899999999999999999999997532 233321 1 1244444443322 5
Q ss_pred cCCcccccCcEeEEEeeCchHHHHhhCCCeeEEecccccccc
Q 010866 442 HMGGTMRLGSRRTYFQIKDCKSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 442 ~~G~tmrlG~~~v~i~~g~S~l~~iYg~~~i~vnslh~q~~~ 483 (498)
||||..+ .+.+...++++..++ .+...+...|+++..
T Consensus 140 ~mg~~~n----~~~~~~~~~Lf~gl~-~~~~~v~~~H~d~V~ 176 (556)
T 3uow_A 140 AMDLYSN----YKLMNETCCLFENIK-SDITTVWMNHNDEVT 176 (556)
T ss_dssp HHHHHTT----SCCCC--CGGGTTCC-SSEEEEEEEEEEEEE
T ss_pred ccccccc----cccccccchhhcccc-cCceEEEEEccceee
Confidence 6665222 122222313333333 357889999998863
No 21
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=2.8e-13 Score=125.85 Aligned_cols=84 Identities=20% Similarity=0.302 Sum_probs=62.7
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC-
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~- 376 (498)
+||+|++-+ ++|.++.++|+.+|+.+.+. +.. +.+.++|||+||||++.+.
T Consensus 1 m~i~vl~~~----g~~~~~~~~l~~~G~~~~~~------~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLAIQ----GDVEEHEEAIKKAGYEAKKV------KRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEECSS----SCCHHHHHHHHHTTSEEEEE------CSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEecC----cchHHHHHHHHHCCCEEEEE------CCh------------------HHhccCCEEEECCCCchhhh
Confidence 479999733 47889999999999865442 321 3467889999999987542
Q ss_pred ----chhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchh
Q 010866 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV 412 (498)
Q Consensus 377 ----~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v 412 (498)
..+..+. +++.++|+||||+|||+|+.++|+++
T Consensus 53 ~~~~~~~~~~~---i~~~~~PilGIC~G~Qll~~~~gg~~ 89 (186)
T 2ywj_A 53 KLMKKYGLLEK---IKNSNLPILGTCAGMVLLSKGTGINQ 89 (186)
T ss_dssp HHHHHTTHHHH---HHTCCCCEEEETHHHHHHSSCCSSCC
T ss_pred hhhhccCHHHH---HHhcCCcEEEECHHHHHHHHHhCCCc
Confidence 1123333 33789999999999999999999874
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.37 E-value=3.3e-13 Score=145.47 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=86.7
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g~~ 375 (498)
.+|+|+| |+.. .-.++.++|+.+|+.+.+. +.+. ++ +.+ .++|||||||||++.
T Consensus 8 ~~IlIlD-~g~~--~~~~i~r~lr~~G~~~~i~------p~~~--------~~-------~~i~~~~~dgiILsGGp~s~ 63 (525)
T 1gpm_A 8 HRILILD-FGSQ--YTQLVARRVRELGVYCELW------AWDV--------TE-------AQIRDFNPSGIILSGGPEST 63 (525)
T ss_dssp SEEEEEE-CSCT--THHHHHHHHHHTTCEEEEE------ESCC--------CH-------HHHHHHCCSEEEECCCSSCT
T ss_pred CEEEEEE-CCCc--cHHHHHHHHHHCCCEEEEE------ECCC--------CH-------HHHhccCCCEEEECCcCccc
Confidence 5899997 7732 2257999999999876653 2221 01 122 267999999999875
Q ss_pred CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEeEE
Q 010866 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (498)
Q Consensus 376 ~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~v~ 455 (498)
..+......+.+.+.++|+||||+|||+|+.++||++.+.+ +.| +|.+++.
T Consensus 64 ~~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~~e--------------------------~G~~~v~ 114 (525)
T 1gpm_A 64 TEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---ERE--------------------------FGYAQVE 114 (525)
T ss_dssp TSTTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---SCE--------------------------EEEEEEE
T ss_pred cccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---Ccc--------------------------cceEEEE
Confidence 22111112344567899999999999999999999997532 111 2344555
Q ss_pred EeeCchHHHHhhCC-------CeeEEecccccccc
Q 010866 456 FQIKDCKSAKLFIC-------GFNYVEIIISKANM 483 (498)
Q Consensus 456 i~~g~S~l~~iYg~-------~~i~vnslh~q~~~ 483 (498)
+.++ +.+++-++. ....|+..|++++.
T Consensus 115 ~~~~-~~L~~~l~~~~~~~~~~~~~v~~~H~~~V~ 148 (525)
T 1gpm_A 115 VVND-SALVRGIEDALTADGKPLLDVWMSHGDKVT 148 (525)
T ss_dssp ECSC-CTTTTTCCSEECTTSCEEEEEEEEECSEEE
T ss_pred eCCC-CHhhccCccccccccccceEEEEEccceee
Confidence 5555 555554443 16788888988864
No 23
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.36 E-value=4.8e-13 Score=144.32 Aligned_cols=93 Identities=22% Similarity=0.309 Sum_probs=63.3
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc--CCCEEEEcCCCCCC
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~--~~DGIilpGG~g~~ 375 (498)
.+|+|+| |+.. .-.+|.++|+.+|+.+.+. +.+.. . +.+. ++|||||||||+..
T Consensus 11 ~~I~IlD-~g~~--~~~~i~r~lr~~Gv~~~i~------p~~~~-~--------------~~i~~~~~dgIILsGGp~sv 66 (527)
T 3tqi_A 11 HRILILD-FGSQ--YAQLIARRVREIGVYCELM------PCDID-E--------------ETIRDFNPHGIILSGGPETV 66 (527)
T ss_dssp SEEEEEE-CSCT--THHHHHHHHHHHTCEEEEE------ETTCC-S--------------SSSTTTCCSEEEECCCCC--
T ss_pred CeEEEEE-CCCc--cHHHHHHHHHHCCCeEEEE------ECCCC-H--------------HHHHhcCCCEEEECCcCccc
Confidence 4899997 7621 2358999999999887664 21110 0 1222 57999999999876
Q ss_pred CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcc
Q 010866 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLN 414 (498)
Q Consensus 376 ~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~ 414 (498)
...+.....+.+.+.++|+||||+|||+|+.++||++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~ 105 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNR 105 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC-
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEe
Confidence 444444455666788999999999999999999999864
No 24
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.35 E-value=1.7e-12 Score=122.33 Aligned_cols=130 Identities=18% Similarity=0.138 Sum_probs=89.0
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC-C
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 376 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~-~ 376 (498)
++|+|++ |.... ...++.++|+.+|+.+.+. +.. +.+.++|+||||||++.. .
T Consensus 3 ~~i~il~-~~~~~-~~~~~~~~l~~~g~~~~~~------~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVVV-YPGSN-CDRDAYHALEINGFEPSYV------GLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEEC-CTTEE-EHHHHHHHHHTTTCEEEEE------CTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEEE-cCCCC-ccHHHHHHHHHCCCEEEEE------ecC------------------CCcccCCEEEECCCCchhhh
Confidence 5899996 65332 3357899999999765543 221 135678999999987532 1
Q ss_pred --------chhHHHHHHHHHHcCCCEEeehHHHHHHHHH--hcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcc
Q 010866 377 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (498)
Q Consensus 377 --------~~g~i~~i~~a~e~~iPiLGIClGmQll~va--~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~t 446 (498)
.....++++++.++++|+||||+|||+|+.+ +++++...+ ...
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~---------------------------~~~ 109 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNS---------------------------SGK 109 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCS---------------------------SSS
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCC---------------------------CCc
Confidence 2456788999888999999999999999988 555442110 000
Q ss_pred cccCcEeEEEe-eCchHHHHhhCC-CeeEEecccccc
Q 010866 447 MRLGSRRTYFQ-IKDCKSAKLFIC-GFNYVEIIISKA 481 (498)
Q Consensus 447 mrlG~~~v~i~-~g~S~l~~iYg~-~~i~vnslh~q~ 481 (498)
...|.+++.+. ++ +.+.+.++. ..+.+++.|+||
T Consensus 110 ~~~g~~~v~~~~~~-~~l~~~~~~~~~~~~~~~H~~~ 145 (213)
T 3d54_D 110 FICKWVDLIVENND-TPFTNAFEKGEKIRIPIAHGFG 145 (213)
T ss_dssp CBCCEEEEEECCCS-STTSTTSCTTCEEEEECCBSSC
T ss_pred eEeeeEEEEeCCCC-CceeeccCCCCEEEEEeecCce
Confidence 12345677776 56 677777764 578888888665
No 25
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.34 E-value=1.2e-12 Score=144.46 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=73.7
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCc
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~ 377 (498)
.+|.++|.|.+ ...++.++|+..|+.+.+. +.+.. ..+.++|||||+||||++..
T Consensus 447 k~IlviD~gds---f~~~l~~~l~~~G~~v~Vv----~~d~~------------------~~~~~~DgIIlsGGPg~p~d 501 (645)
T 3r75_A 447 CRALIVDAEDH---FTAMIAQQLSSLGLATEVC----GVHDA------------------VDLARYDVVVMGPGPGDPSD 501 (645)
T ss_dssp CEEEEEESSCT---HHHHHHHHHHHTTCEEEEE----ETTCC------------------CCGGGCSEEEECCCSSCTTC
T ss_pred CEEEEEECCcc---HHHHHHHHHHHCCCEEEEE----ECCCc------------------ccccCCCEEEECCCCCChhh
Confidence 48999985542 3368999999999876653 32221 12457899999999998743
Q ss_pred h------hHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCC
Q 010866 378 Q------GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRD 417 (498)
Q Consensus 378 ~------g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~ 417 (498)
. ...++++++++.++|+||||+|||+|+.++|+++.+++.
T Consensus 502 ~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~ 547 (645)
T 3r75_A 502 AGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREV 547 (645)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCC
Confidence 2 356788999999999999999999999999999987553
No 26
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.34 E-value=8.9e-13 Score=133.61 Aligned_cols=100 Identities=20% Similarity=0.173 Sum_probs=64.7
Q ss_pred CeEEEEEcccCCcc--------chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEE
Q 010866 297 PVRIAMVGKYTGLS--------DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 368 (498)
Q Consensus 297 ~v~IaIVgkY~~l~--------day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIil 368 (498)
++.|||........ -...|+.++|+.+|+.+.+. +... ++ ....+.+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv------~~~~--------~~---~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPV------RLDL--------TE---KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEE------CSSC--------CH---HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEE------ecCC--------CH---HHHHHHHhcCCEEEE
Confidence 56899996443211 02247899999999876653 2211 01 011234568999999
Q ss_pred cCCCCCC--C-c-hhHHHHHHHHHHc-----CCCEEeehHHHHHHHHHhcchhc
Q 010866 369 PGGFGNR--G-V-QGKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVL 413 (498)
Q Consensus 369 pGG~g~~--~-~-~g~i~~i~~a~e~-----~iPiLGIClGmQll~va~g~~v~ 413 (498)
|||+++. . . .....+++.+++. ++|+||||+|||+|++++||++.
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~ 146 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECL 146 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCC
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccc
Confidence 9999874 2 1 1112334444443 69999999999999999999864
No 27
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.29 E-value=1.3e-12 Score=125.01 Aligned_cols=90 Identities=19% Similarity=0.292 Sum_probs=69.6
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~ 375 (498)
.+++|+|++ + .++|.+..++|+.+|+.+.+. +.. +.+.++||||||||++..
T Consensus 22 ~~~~I~il~-~---~~~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVLG-L---QGAVREHVRAIEACGAEAVIV------KKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEES-C---GGGCHHHHHHHHHTTCEEEEE------CSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEEe-C---CCCcHHHHHHHHHCCCEEEEE------CCH------------------HHHhhCCEEEECCCChHH
Confidence 357999997 4 236777789999999865442 321 246689999999998643
Q ss_pred C-----chhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhc
Q 010866 376 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVL 413 (498)
Q Consensus 376 ~-----~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~ 413 (498)
. .....+.++++.+.++|+||||+|||+|+.++|+++.
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~ 116 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDE 116 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCc
Confidence 1 2345788999999999999999999999999999763
No 28
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.29 E-value=4e-12 Score=119.60 Aligned_cols=134 Identities=24% Similarity=0.285 Sum_probs=87.3
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC--
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~-- 375 (498)
++|+|++ |+ .+ ++.++.++|+.+|+++.+. +.. +.+.++|||+||| +|++
T Consensus 3 ~~I~iid-~~-~~-~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLID-YG-SG-NLRSAAKALEAAGFSVAVA------QDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEEC-SS-CS-CHHHHHHHHHHTTCEEEEE------SST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEEe-CC-Cc-cHHHHHHHHHHCCCeEEEe------cCh------------------HHcccCCEEEECC-CCcHHH
Confidence 5899996 75 33 7889999999999876543 221 2356899999987 3442
Q ss_pred ---Cc--hhHHHHHHHHHHcCCCEEeehHHHHHHHHH---hcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCccc
Q 010866 376 ---GV--QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (498)
Q Consensus 376 ---~~--~g~i~~i~~a~e~~iPiLGIClGmQll~va---~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tm 447 (498)
.+ ....+.++++.+.++|+||||+|||+|+.+ +|+ + +.. ..+ +..+... +..+.+++
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg--~--~~l--~~~----~g~v~~~-~~~~~~~~---- 119 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG--V--RGL--GLV----PGEVRRF-RAGRVPQM---- 119 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT--C--CCC--CSS----SSEEEEC-CSSSSSEE----
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC--c--CCc--ccc----ccEEEEC-CCCCCCce----
Confidence 11 346788999999999999999999999988 554 2 111 011 1223222 10122333
Q ss_pred ccCcEeEEEeeCchHHHHhhCCCeeEEecccc
Q 010866 448 RLGSRRTYFQIKDCKSAKLFICGFNYVEIIIS 479 (498)
Q Consensus 448 rlG~~~v~i~~g~S~l~~iYg~~~i~vnslh~ 479 (498)
|.+++.+.+ + +..+.+.....+||+|.
T Consensus 120 --G~~~v~~~~--~-l~~~~~~~~~~~Hs~~~ 146 (200)
T 1ka9_H 120 --GWNALEFGG--A-FAPLTGRHFYFANSYYG 146 (200)
T ss_dssp --EEEECEECG--G-GGGGTTCEEEEEESEEC
T ss_pred --eEEEEEech--h-hhcCCCCCEEEeccccc
Confidence 445666665 4 66666644567899987
No 29
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.27 E-value=1.8e-12 Score=138.94 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=64.2
Q ss_pred EEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc--CCCEEEEcCCCCCCCc
Q 010866 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (498)
Q Consensus 300 IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~--~~DGIilpGG~g~~~~ 377 (498)
|+|+| |+.. .-.+|.++|+.+|+.+.+. +.+. ++ +.+. ++|||||||||++...
T Consensus 2 i~ilD-~g~~--~~~~i~r~l~~~G~~~~i~------p~~~--------~~-------~~i~~~~~dgiIlsGGp~s~~~ 57 (503)
T 2ywb_A 2 VLVLD-FGSQ--YTRLIARRLRELRAFSLIL------PGDA--------PL-------EEVLKHRPQALILSGGPRSVFD 57 (503)
T ss_dssp EEEEE-SSCT--THHHHHHHHHTTTCCEEEE------ETTC--------CH-------HHHHTTCCSEEEECCCSSCSSC
T ss_pred EEEEE-CCCc--HHHHHHHHHHHCCCEEEEE------ECCC--------CH-------HHHHhcCCCEEEECCCCchhcc
Confidence 88997 7721 2258999999999887654 2211 01 2333 4699999999987522
Q ss_pred hhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhccc
Q 010866 378 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNL 415 (498)
Q Consensus 378 ~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~l 415 (498)
+......+.+.+.++|+||||+|||+|+.++||++.+.
T Consensus 58 ~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~ 95 (503)
T 2ywb_A 58 PDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERA 95 (503)
T ss_dssp TTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC
T ss_pred CCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeC
Confidence 11111224456789999999999999999999999753
No 30
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.26 E-value=3.3e-12 Score=118.56 Aligned_cols=88 Identities=16% Similarity=0.232 Sum_probs=68.1
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC--
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~-- 375 (498)
++|+|+. + .+++.++.++|+.+|+.+.+. +.. +.+.++|||+||||++..
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKEV------RKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEEE------CSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEEe------CCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799996 3 237889999999999887653 211 245679999999996431
Q ss_pred C---chhHHHHHHHHHHcC-CCEEeehHHHHHHHHHhcc-hhc
Q 010866 376 G---VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVL 413 (498)
Q Consensus 376 ~---~~g~i~~i~~a~e~~-iPiLGIClGmQll~va~g~-~v~ 413 (498)
. .....+.++.+.+.+ +|+||||+|||+|+.++|+ +++
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~ 97 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQ 97 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTC
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCC
Confidence 1 134577888888889 9999999999999999998 653
No 31
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.25 E-value=3.6e-12 Score=120.98 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=65.5
Q ss_pred CCCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCC
Q 010866 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (498)
Q Consensus 295 ~~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~ 374 (498)
.++++|++++ |. .+|.++.++|+.+|+++.+. +.. +.+.++|||+||||+..
T Consensus 18 ~~~~~I~ii~-~~---~~~~~~~~~l~~~g~~~~~~------~~~------------------~~l~~~d~iil~GG~~~ 69 (208)
T 2iss_D 18 GSHMKIGVLG-VQ---GDVREHVEALHKLGVETLIV------KLP------------------EQLDMVDGLILPGGEST 69 (208)
T ss_dssp --CCEEEEEC-SS---SCHHHHHHHHHHTTCEEEEE------CSG------------------GGGGGCSEEEECSSCHH
T ss_pred CCCcEEEEEE-CC---CchHHHHHHHHHCCCEEEEe------CCh------------------HHHhhCCEEEECCCcHH
Confidence 4568999996 72 38999999999998755432 321 23567999999998532
Q ss_pred C-C----chhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchh
Q 010866 375 R-G----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV 412 (498)
Q Consensus 375 ~-~----~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v 412 (498)
. + ..+..++++++.+.++|+||||+|||+|+.++|++.
T Consensus 70 ~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~ 112 (208)
T 2iss_D 70 TMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYS 112 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---
T ss_pred HHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCC
Confidence 1 1 123467889998999999999999999999999864
No 32
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.22 E-value=5.6e-12 Score=117.98 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=64.8
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC-
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~- 376 (498)
+||+|++ |. ++|.+..++|+.+|+.+.+. +.. +.+.++|||+||||++...
T Consensus 2 m~I~il~-~~---~~~~~~~~~l~~~g~~~~~~------~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVLG-LQ---GAVREHIHAIEACGAAGLVV------KRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEEC-SS---SCCHHHHHHHHHTTCEEEEE------CSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEEE-cc---CCcHHHHHHHHHCCCEEEEe------CCh------------------HHHhhCCEEEECCCChhhHH
Confidence 5899997 42 47778889999999764432 321 2456799999999986431
Q ss_pred ----chhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhc
Q 010866 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVL 413 (498)
Q Consensus 377 ----~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~ 413 (498)
..+..+.++.+.++++|+||||+|||+|+.++|+++.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~ 94 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDN 94 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCC
Confidence 1334678889989999999999999999999999763
No 33
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.22 E-value=5.4e-12 Score=140.42 Aligned_cols=130 Identities=16% Similarity=0.118 Sum_probs=82.1
Q ss_pred eEEEEEcccCCccchH-HHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCCC
Q 010866 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (498)
Q Consensus 298 v~IaIVgkY~~l~day-~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g~ 374 (498)
.+|+++| |+. .| ..+.++|+.+|+.+.+. +.+.. + +.+ .++|||||||||++
T Consensus 30 ~~I~VLD-fg~---q~~~liar~lre~Gv~~~iv------p~~~~--------~-------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVILD-AGA---QYGKVIDRRVRELFVQSEIF------PLETP--------A-------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEEE-EC-----CHHHHHHHHHHTTCCEEEE------ETTCC--------H-------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEEE-CCC---chHHHHHHHHHHCCCEEEEE------ECCCC--------H-------HHHhhcCCCEEEECCCCCc
Confidence 3799997 652 33 25789999999887654 32211 0 222 57999999999997
Q ss_pred CCchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcchhcccCCCCCCccCCCCCCCeeeeCCCCccCcCCcccccCcEeE
Q 010866 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (498)
Q Consensus 375 ~~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~~v~~lk~~~s~E~~~~~~~~vi~l~~e~~~~~~G~tmrlG~~~v 454 (498)
...++.....+.+.+.++|+||||+|||+|+.++||++.+++ +. ..|.+++
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~---~~--------------------------e~G~~~v 135 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS---VR--------------------------EDGVFNI 135 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEE
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecC---CC--------------------------ccceEEE
Confidence 421111111233456889999999999999999999997532 11 1234667
Q ss_pred EEeeCchHHHHhhCCCeeEEecccccccc
Q 010866 455 YFQIKDCKSAKLFICGFNYVEIIISKANM 483 (498)
Q Consensus 455 ~i~~g~S~l~~iYg~~~i~vnslh~q~~~ 483 (498)
.+.++ +.+++.++ +...|+..|++++.
T Consensus 136 ~~~~~-~~Lf~~l~-~~~~v~~~H~~~V~ 162 (697)
T 2vxo_A 136 SVDNT-CSLFRGLQ-KEEVVLLTHGDSVD 162 (697)
T ss_dssp EECTT-SGGGTTCC-SEEEECCCSSCCBS
T ss_pred EecCC-ChhhhcCC-ccCcceeeccccee
Confidence 77766 66766665 35688889999873
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.15 E-value=1.7e-11 Score=117.42 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=66.5
Q ss_pred CeEEEEEcccCCccchHHHHHHHHHHc---CCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCC
Q 010866 297 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (498)
Q Consensus 297 ~v~IaIVgkY~~l~day~SI~~AL~~a---G~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g 373 (498)
+++|+|++ |. .++.+..++|+.+ |+.+.. ++. + +.+.++||||||||+.
T Consensus 3 ~~~I~Il~-~~---~~~~~~~~~l~~~~~~G~~~~~------~~~-----------~-------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVLS-LQ---GDFEPHINHFIKLQIPSLNIIQ------VRN-----------V-------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEEC-TT---SCCHHHHHHHHTTCCTTEEEEE------ECS-----------H-------HHHHTCSEEEECCSCH
T ss_pred CcEEEEEe-CC---CCcHHHHHHHHHhccCCeEEEE------EcC-----------c-------cccccCCEEEECCCcH
Confidence 47999996 54 2567889999998 754332 221 1 3467899999999975
Q ss_pred CC-----Cc--hhHHHHHHHHHHc-CCCEEeehHHHHHHHHHhcchh
Q 010866 374 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSV 412 (498)
Q Consensus 374 ~~-----~~--~g~i~~i~~a~e~-~iPiLGIClGmQll~va~g~~v 412 (498)
+. .. .+..+.++.+.+. ++|+||||+|||+|+.++|+++
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~ 101 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIK 101 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCc
Confidence 31 11 3457888999999 9999999999999999999875
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.99 E-value=9.4e-11 Score=127.28 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=86.6
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC-
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~- 376 (498)
++|+|++ |+ .+ ++.++.++|+.+|+.+.+. +..+ . ..+.++|||||||| |++.
T Consensus 5 ~~I~Iid-~~-~g-~~~~~~~~l~~~G~~~~vv------~~~~--~--------------~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVID-VE-SG-NLQSLTNAIEHLGYEVQLV------KSPK--D--------------FNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEEC-CS-CS-CCHHHHHHHHHTTCEEEEE------SSGG--G--------------CCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEEE-CC-CC-CHHHHHHHHHHCCCEEEEE------CCcc--c--------------cccccCCEEEECCC-CchHh
Confidence 5899997 86 22 5678999999999866543 3210 0 13678999999884 3321
Q ss_pred ------chhHHHHHHHHHHcCCCEEeehHHHHHHHHHh--cchhcccCCCCCCccCCCCCCCeeeeCC-CCccCcCCccc
Q 010866 377 ------VQGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTEFDPNTKNPCVIFMP-EGSKTHMGGTM 447 (498)
Q Consensus 377 ------~~g~i~~i~~a~e~~iPiLGIClGmQll~va~--g~~v~~lk~~~s~E~~~~~~~~vi~l~~-e~~~~~~G~tm 447 (498)
..+..++++.+.+.++|+||||+|||+|+.++ |+..-+|. .+ ...+.++.. ..+.+++||
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg-----~l----gg~v~~~~~~~~~~~~~G~-- 127 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLN-----YI----DFKLSRFDDSEKPVPEIGW-- 127 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCC-----SE----EEEEEECCTTTSCSSEEEE--
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccC-----CC----CcEEEECCcCCCCCccccc--
Confidence 12457788999899999999999999999877 22211110 00 112322211 123455565
Q ss_pred ccCcEeEEEeeCchHHHHhhCC--CeeEEeccccccc
Q 010866 448 RLGSRRTYFQIKDCKSAKLFIC--GFNYVEIIISKAN 482 (498)
Q Consensus 448 rlG~~~v~i~~g~S~l~~iYg~--~~i~vnslh~q~~ 482 (498)
+++.+. + . +++..+. ....+||+|.|++
T Consensus 128 ----~~v~~~-~-~-L~~~l~~~~~~~~vHS~~~~~i 157 (555)
T 1jvn_A 128 ----NSCIPS-E-N-LFFGLDPYKRYYFVHSFAAILN 157 (555)
T ss_dssp ----ECCCCC-T-T-CCTTCCTTSCEEEEESEECBCC
T ss_pred ----eEEEEc-C-H-HHhhCCCCceEEEEEEEEEEec
Confidence 333333 3 3 3333333 4567999999986
No 36
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.52 E-value=7.4e-08 Score=113.37 Aligned_cols=90 Identities=19% Similarity=0.222 Sum_probs=62.0
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~ 375 (498)
.++||+|++ |.... +-.++.+||+++|+++.+. |+. ++.. .+ +.+.++|+|+|||||...
T Consensus 1046 ~~pkVaIi~-~~G~N-~~~~~~~A~~~aG~~~~~v----~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSyg 1105 (1303)
T 3ugj_A 1046 ARPKVAVLR-EQGVN-SHVEMAAAFHRAGFDAIDV----HMS--DLLG-----GR-------IGLGNFHALVACGGFSYG 1105 (1303)
T ss_dssp CCCEEEEEE-CTTCC-CHHHHHHHHHHTTCEEEEE----EHH--HHHT-----TS-------CCGGGCSEEEECCSCGGG
T ss_pred CCCEEEEEe-cCCcC-CHHHHHHHHHHhCCceEEE----eec--cccc-----Cc-------ccHhhCCEEEECCCCcch
Confidence 357999997 74333 5689999999999876643 431 1100 01 357789999999997431
Q ss_pred -----Cc---------hhHHHHHHHHH-HcCCCEEeehHHHHHHH
Q 010866 376 -----GV---------QGKILAAKYAR-EHRIPYLGICLGMQVAV 405 (498)
Q Consensus 376 -----~~---------~g~i~~i~~a~-e~~iPiLGIClGmQll~ 405 (498)
+. ....++++.+. +.++|+||||+|||+|+
T Consensus 1106 D~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~ 1150 (1303)
T 3ugj_A 1106 DVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS 1150 (1303)
T ss_dssp GTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH
T ss_pred hhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH
Confidence 10 23445566644 57899999999999999
No 37
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.47 E-value=6.3e-08 Score=93.71 Aligned_cols=88 Identities=15% Similarity=0.182 Sum_probs=62.9
Q ss_pred CeEEEEEcccCC---cc-chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCC
Q 010866 297 PVRIAMVGKYTG---LS-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (498)
Q Consensus 297 ~v~IaIVgkY~~---l~-day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~ 372 (498)
..+|++|+ |.. .. .+..|+.++|+..|+++... .. . .+ ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI~-~a~~~~~~~~~~~~~~~al~~lG~~~~~v------~~--~------~d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFIP-FAGVTQTWDEYTDKTAEVLAPLGVNVTGI------HR--V------AD------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEEC-TTCCSSCHHHHHHHHHHHHGGGTCEEEET------TS--S------SC------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEEE-CCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ec--c------cc------HHHHHhcCCEEEECCCc
Confidence 45899996 862 11 24578999999999764432 11 0 01 11567889999999954
Q ss_pred CCC---C--chhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 373 GNR---G--VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 373 g~~---~--~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
-.. . ..+..++++++.++++|++|||.|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 322 1 24678889988889999999999999998
No 38
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.46 E-value=1.2e-07 Score=90.71 Aligned_cols=92 Identities=15% Similarity=0.003 Sum_probs=64.4
Q ss_pred CeEEEEEcccCCc---c-chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCC
Q 010866 297 PVRIAMVGKYTGL---S-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (498)
Q Consensus 297 ~v~IaIVgkY~~l---~-day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~ 372 (498)
..+|++|+ |..- . +...|+.++|++.|+++.+. +-.+ .+| .+..+.+.++|+|++|||-
T Consensus 27 ~~~i~~Ip-~As~~~~~~~~~~s~~~a~~~lG~~v~~~------~i~~-------~~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFIP-TASTVEEVTFYVEAGKKALESLGLLVEEL------DIAT-------ESL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEEC-GGGGGCSCCHHHHHHHHHHHHTTCEEEEC------CTTT-------SCH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEEC-CCCCCCCHHHHHHHHHHHHHHcCCeEEEE------EecC-------CCh---HHHHHHHHhCCEEEECCCC
Confidence 35999996 7632 1 24579999999999865432 2111 011 1122567889999999953
Q ss_pred CCC-----CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 373 GNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 373 g~~-----~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
-.. ...+..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 222 125788899999999999999999999997
No 39
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=98.18 E-value=3.5e-06 Score=85.57 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=40.6
Q ss_pred cCCCEEEEcCCCCCC-------CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcc
Q 010866 361 KGADGILVPGGFGNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR 410 (498)
Q Consensus 361 ~~~DGIilpGG~g~~-------~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~ 410 (498)
.++||+|+.|||-.. -+..+.+.++++.++++|+||||+|+|++..++||
T Consensus 110 ~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G 166 (312)
T 2h2w_A 110 RKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYG 166 (312)
T ss_dssp CCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHC
T ss_pred cCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCC
Confidence 579999999998432 23557778899999999999999999996666665
No 40
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=98.16 E-value=3.1e-06 Score=85.56 Aligned_cols=51 Identities=18% Similarity=0.241 Sum_probs=40.7
Q ss_pred ccCCCEEEEcCCCCCC-------CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhcc
Q 010866 360 LKGADGILVPGGFGNR-------GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR 410 (498)
Q Consensus 360 l~~~DGIilpGG~g~~-------~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g~ 410 (498)
..++||+|+.|||-.. -+..+.+.++++.++++|+||||+|+|++..++||
T Consensus 97 ~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G 154 (301)
T 2vdj_A 97 NEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYG 154 (301)
T ss_dssp TSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHC
T ss_pred ccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCC
Confidence 3679999999998432 23557788899999999999999999996555555
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.73 E-value=0.00011 Score=68.50 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=63.0
Q ss_pred CeEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCC-cccc----ccCCChhhhHHHHHh--ccCCCEEEE
Q 010866 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWKL--LKGADGILV 368 (498)
Q Consensus 297 ~v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~-l~~~----~~~~~p~~y~~~~~~--l~~~DGIil 368 (498)
..||+++- +..+.+ ......+.|+.+|+++.+. -..... +... .+..+. ..+. ...+|+|++
T Consensus 23 ~~kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~~v~~~~-----~l~~~~~~~~D~liv 92 (193)
T 1oi4_A 23 SKKIAVLI-TDEFEDSEFTSPADEFRKAGHEVITI----EKQAGKTVKGKKGEASVTIDK-----SIDEVTPAEFDALLL 92 (193)
T ss_dssp CCEEEEEC-CTTBCTHHHHHHHHHHHHTTCEEEEE----ESSTTCEEECTTSSCEEECCE-----EGGGCCGGGCSEEEE
T ss_pred CCEEEEEE-CCCCCHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCCeEEECCC-----ChHHCCcccCCEEEE
Confidence 45788885 543432 3567889999999766543 111110 1000 000000 0012 246899999
Q ss_pred cCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 369 PGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 369 pGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
|||++.. ......++++.+.++++|++|||.|.|+|+-
T Consensus 93 pGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~ 133 (193)
T 1oi4_A 93 PGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLIS 133 (193)
T ss_dssp CCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 9997642 2356788899999999999999999999984
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.41 E-value=0.00046 Score=62.21 Aligned_cols=97 Identities=13% Similarity=0.267 Sum_probs=61.6
Q ss_pred CeEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCC--ccc-cc--cCCChhhhHHHHHhc--cCCCEEEE
Q 010866 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD--LED-AT--EKENPDAYKAAWKLL--KGADGILV 368 (498)
Q Consensus 297 ~v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~--l~~-~~--~~~~p~~y~~~~~~l--~~~DGIil 368 (498)
.+||+++- |..+.+ ......+.|+.+|+++.+. .++. +.. .. +..+. ..+.+ ..+|.|++
T Consensus 2 ~~ki~il~-~~g~~~~e~~~~~~~l~~ag~~v~~v------s~~~~~v~~~~g~~i~~~~-----~~~~~~~~~~D~liv 69 (168)
T 3l18_A 2 SMKVLFLS-ADGFEDLELIYPLHRIKEEGHEVYVA------SFQRGKITGKHGYSVNVDL-----TFEEVDPDEFDALVL 69 (168)
T ss_dssp CCEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEE------ESSSEEEECTTSCEEEECE-----EGGGCCGGGCSEEEE
T ss_pred CcEEEEEe-CCCccHHHHHHHHHHHHHCCCEEEEE------ECCCCEEecCCCcEEeccC-----ChhHCCHhhCCEEEE
Confidence 35788874 554432 3456788999998766543 1111 000 00 00000 01222 35899999
Q ss_pred cCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 369 PGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 369 pGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
|||++.. ......+.++.+.++++|+.+||-|.++|+
T Consensus 70 pGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 109 (168)
T 3l18_A 70 PGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILI 109 (168)
T ss_dssp CCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHH
T ss_pred CCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHH
Confidence 9998642 335677889999999999999999999988
No 43
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.88 E-value=0.0041 Score=60.59 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=95.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCcc----cc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~Y----eR 76 (498)
+|.||||| .=++.||=++++.|.+.|+.+|++|...| |.+.|-. ..+| .|-|...+ .+
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK-------------Pv~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK-------------PIETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC-------------CEECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe-------------eeecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47899986 56999999999999999999999999988 2222210 0001 22233333 34
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcccccc-
Q 010866 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (498)
Q Consensus 77 f~-~~~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdi- 154 (498)
+. +.+...-+-++--.-.+--+..++.|.+ +. ---++|++.+.+++ .++|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~--------~~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFT--------KTYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGG--------GTCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCccccc
Confidence 43 2221000000000000112233334432 11 13477888888886 36899999965545442
Q ss_pred -CcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecC-CCccccCCchhhHHHhhcCCCcccEEEEecCC
Q 010866 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNV-VGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (498)
Q Consensus 155 -Es~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~-~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~ 220 (498)
+..-..+-++++... ++.| ... .|- -.-+.-+++.|++.|+. .++|+-...
T Consensus 148 ~~~~~~adlA~~l~~p-----VILV-------~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~v~ 200 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----MLLI-------SHDNLGL--INDCLLNDFLLKSHQLD-YKIAINLKG 200 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----EEEE-------ECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECCCT
T ss_pred cccchHHHHHHHcCCC-----EEEE-------EcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeCCC
Confidence 334445666666532 2221 211 121 12456677888899999 999986543
No 44
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.73 E-value=0.0042 Score=56.47 Aligned_cols=89 Identities=17% Similarity=0.272 Sum_probs=66.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 788888876 788999999999999999999999999999643321 01100
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccc
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD 153 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd 153 (498)
. .. .+.++|--.+.+.+.+..+. ..+|++||+.++..++
T Consensus 51 ~---------------------~~-----~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~ 89 (206)
T 4dzz_A 51 G---------------------KA-----AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV 89 (206)
T ss_dssp S---------------------CC-----SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH
T ss_pred C---------------------CC-----CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH
Confidence 0 00 04566655688888888875 3689999999998744
No 45
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.64 E-value=0.0057 Score=56.05 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=60.9
Q ss_pred CeEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCCccc------c--ccCCChhhhHHHHHhc--cCCCE
Q 010866 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------A--TEKENPDAYKAAWKLL--KGADG 365 (498)
Q Consensus 297 ~v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~l~~------~--~~~~~p~~y~~~~~~l--~~~DG 365 (498)
..+|+++- |..+.+ ......+.|+.+|+++.+. ......+.. . .+..+. ..+.+ ..+|+
T Consensus 9 ~~~v~il~-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~~~~~~g~~v~~~~-----~~~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAILA-ADGVEEIELTSPRAAIEAAGGTTELI----SLEPGEIQSMKGDIEPQEKYRVDH-----VVSEVQVSDYDG 78 (190)
T ss_dssp TCEEEEEC-CTTCBHHHHHHHHHHHHHTTCEEEEE----ESSSSEEEEEETTTEEEEEEECSE-----EGGGCCGGGCSE
T ss_pred CCEEEEEe-CCCCCHHHHHHHHHHHHHCCCEEEEE----ecCCCccccccccccCCcEEeCCC-----ChhhCChhhCCE
Confidence 35788884 554442 3455678999998766532 111100000 0 000000 01222 46899
Q ss_pred EEEcCCCCC----CCchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 366 ILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 366 IilpGG~g~----~~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
|++|||++. +......++++.+.++++|+.+||-|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 999999742 23456788999999999999999999998883
No 46
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=96.56 E-value=0.0065 Score=58.29 Aligned_cols=170 Identities=15% Similarity=0.196 Sum_probs=93.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||-||||| .-|+.||=++++.|.+.|+.+|++|...| |.|+|-.+ .+|| ..|-|.-. +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 68899986 56999999999999999999999999966 45565322 1222 11112211 22222
Q ss_pred CCCCCCcccchHhh----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCccEEEEeeCccccc--
Q 010866 81 KLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (498)
Q Consensus 81 ~l~~~~n~t~G~iy----~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~-~~~~pvd~~~~~~dv~i~EiGGTvGd-- 153 (498)
+++..+ + ..-.| .--+..++.|. +---++|++.+.+ ++ .++|++|||--|-+.+
T Consensus 66 ~~~~~~-~-~~~~~~~p~sp~~aa~~~~~---------~i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAAE-I-NLISFNQAVAPHIIAAKTKV---------DISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHHH-H-CSEEESSSSCHHHHHHHTTC---------CCCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChhh-E-EEEEECCCCCHHHHHHHcCC---------CCCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 211100 0 00011 01111222332 1123678888887 65 3789999996544433
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCC
Q 010866 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (498)
Q Consensus 154 iEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~ 220 (498)
-+..-..+-++++... ++.| --.+ .|- -.-+..+++.++..|+...++|+-...
T Consensus 127 ~~~~~~adla~~l~~p-----viLV-----~~~~-~~~--i~~~~~~~~~l~~~~~~i~GvIlN~~~ 180 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLLV-----SAIK-VGC--INHTLLTINELNRHNIKLAGWIANCND 180 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEEE-----EECS-TTH--HHHHHHHHHHHHHTTCCEEEEEEEECC
T ss_pred ccchhHHHHHHHcCCC-----EEEE-----EcCC-cch--HHHHHHHHHHHHhCCCcEEEEEEECcC
Confidence 1233445555655421 2221 1111 122 223566777788999999999886543
No 47
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=96.36 E-value=0.0048 Score=56.84 Aligned_cols=98 Identities=11% Similarity=0.101 Sum_probs=58.4
Q ss_pred EEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecC-CCccc-c--ccCCChhhhHHHHHhc--cCCCEEEEcCC
Q 010866 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLED-A--TEKENPDAYKAAWKLL--KGADGILVPGG 371 (498)
Q Consensus 299 ~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~s-e~l~~-~--~~~~~p~~y~~~~~~l--~~~DGIilpGG 371 (498)
||+++= +..+.+ ......+.|+.+|+++.+. -... ..+.. . .+..+. ..+.+ ..+|.|++|||
T Consensus 7 kv~ill-~~g~~~~e~~~~~~~l~~ag~~v~~~----s~~~~~~v~~~~g~~i~~d~-----~l~~~~~~~~D~livpGG 76 (190)
T 4e08_A 7 SALVIL-APGAEEMEFIIAADVLRRAGIKVTVA----GLNGGEAVKCSRDVQILPDT-----SLAQVASDKFDVVVLPGG 76 (190)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ESSSSSCEECTTSCEEECSE-----ETGGGTTCCCSEEEECCC
T ss_pred EEEEEE-CCCchHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCcEEECCC-----CHHHCCcccCCEEEECCC
Confidence 566653 333332 3456789999999765543 1111 11110 0 000000 01222 36899999999
Q ss_pred CC-CC---CchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 372 FG-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 372 ~g-~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
.+ .. ......+.++.+.++++|+.+||-|-++|+-
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 77 LGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred ChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 53 22 2345778899999999999999999998873
No 48
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=96.30 E-value=0.0033 Score=58.34 Aligned_cols=45 Identities=20% Similarity=0.161 Sum_probs=38.4
Q ss_pred cCCCEEEEcCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.++|+|++|||+|.. ..+...+.++++.++++|+.+||-|-++|+
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La 115 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMA 115 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHH
Confidence 468999999998864 235678889999999999999999998887
No 49
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=96.19 E-value=0.0044 Score=58.06 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.5
Q ss_pred EEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCC---Ccccc---ccCCChhhhHHHHHhc--cCCCEEEEc
Q 010866 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC---DLEDA---TEKENPDAYKAAWKLL--KGADGILVP 369 (498)
Q Consensus 299 ~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se---~l~~~---~~~~~p~~y~~~~~~l--~~~DGIilp 369 (498)
||+++- |..+.+ ......+.|+.+|+++.+. ..... .+... .+..+. ..+.+ ..+|+|++|
T Consensus 4 kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~~~v~~~~g~~v~~~~-----~l~~~~~~~~D~livp 73 (205)
T 2ab0_A 4 SALVCL-APGSEETEAVTTIDLLVRGGIKVTTA----SVASDGNLAITCSRGVKLLADA-----PLVEVADGEYDVIVLP 73 (205)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ECSSTTCCEEECTTSCEEECSE-----EHHHHTTSCCSEEEEC
T ss_pred EEEEEE-cCCCcHHHHHHHHHHHHHCCCEEEEE----eCCCCCCceeecCCCeEEecCC-----CHHHCCcccCCEEEEC
Confidence 566663 433332 3455678999999766542 11111 11000 000000 11223 579999999
Q ss_pred CCCCCC----CchhHHHHHHHHHHcCCCEEeehHHH-HHHH
Q 010866 370 GGFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (498)
Q Consensus 370 GG~g~~----~~~g~i~~i~~a~e~~iPiLGIClGm-Qll~ 405 (498)
||++.. ......++++.+.++++|+.+||-|- ++|+
T Consensus 74 GG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 74 GGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp CCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred CCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 997532 23557788999999999999999999 8888
No 50
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=96.06 E-value=0.0076 Score=56.82 Aligned_cols=48 Identities=6% Similarity=-0.148 Sum_probs=39.6
Q ss_pred HhccCCCEEEEcCCCCCC-----CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 358 KLLKGADGILVPGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 358 ~~l~~~DGIilpGG~g~~-----~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
+.+..+|.|++|||.+.. ..+..+++++.+.++++++.+||-|-.+|+
T Consensus 70 ~~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La 122 (209)
T 3er6_A 70 QSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVA 122 (209)
T ss_dssp GGCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHH
T ss_pred cccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHH
Confidence 345679999999998642 235678889999999999999999998887
No 51
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=95.99 E-value=0.014 Score=57.15 Aligned_cols=168 Identities=19% Similarity=0.231 Sum_probs=90.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.++|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 57888885 67999999999999999999999999988 2333310 111 222222333322
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcccccc--Cc-c
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdi--Es-~ 157 (498)
... .|-++--.-.+--+..++.|.. . ---++|++.+.+++ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~---~-----~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA---L-----PARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC---C-----CCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC---C-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 111 0000000000111222233320 0 11356777777764 47899999965544431 21 2
Q ss_pred hHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecC
Q 010866 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (498)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~ 219 (498)
-..+-++++... ++. |--.+ .|-. .-+.-+++.|+..|+...++|+...
T Consensus 148 ~~adla~~l~~p-----VIL-----V~~~~-~g~i--~~~~lt~~~l~~~g~~i~GvIlN~v 196 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----ALV-----VVTAD-LGTL--NHTKLTLEALAAQQVSCAGLVIGSW 196 (251)
T ss_dssp EHHHHHHHTTCE-----EEE-----EECSS-TTHH--HHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred hHHHHHHHcCCC-----EEE-----EEcCC-CccH--HHHHHHHHHHHhCCCCEEEEEEECC
Confidence 334555554322 221 11111 1222 2356677778899999999998653
No 52
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=95.62 E-value=0.0075 Score=55.43 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=37.3
Q ss_pred CCCEEEEcCCCCC--CCchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 362 GADGILVPGGFGN--RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 362 ~~DGIilpGG~g~--~~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.+|.|++|||.+. +......+.++.+.++++|+.+||-|-++|+
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 108 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALG 108 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 6899999999753 2334577889999999999999999999887
No 53
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=95.57 E-value=0.0058 Score=56.60 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=60.6
Q ss_pred EEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCC-Cccc-cccCCChhhhHHHHHhc---cCCCEEEEcCCC
Q 010866 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC-DLED-ATEKENPDAYKAAWKLL---KGADGILVPGGF 372 (498)
Q Consensus 299 ~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se-~l~~-~~~~~~p~~y~~~~~~l---~~~DGIilpGG~ 372 (498)
||+++- |..+.+ ......+.|+.+|+++.+. ..... .+.. ....-.|. ...+.+ ..+|.|++|||+
T Consensus 5 ~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~v~~d---~~l~~~~~~~~~D~livpGG~ 76 (197)
T 2rk3_A 5 RALVIL-AKGAEEMETVIPVDVMRRAGIKVTVA----GLAGKDPVQCSRDVVICPD---ASLEDAKKEGPYDVVVLPGGN 76 (197)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ETTCSSCEECTTSCEECCS---EEHHHHHTTCCCSEEEECCCH
T ss_pred EEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEE----EcCCCCccccCCCCEEeCC---cCHHHcCCccCCCEEEECCCc
Confidence 677764 443432 3456788999998765542 11111 1110 00000010 011233 679999999997
Q ss_pred CCC----CchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 373 GNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 373 g~~----~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
+.. ......+.++.+.++++|+.+||-|-++|+-
T Consensus 77 ~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 77 LGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred hhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 422 2345778899999999999999999998883
No 54
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.48 E-value=0.0096 Score=57.98 Aligned_cols=48 Identities=21% Similarity=0.321 Sum_probs=39.2
Q ss_pred cCCCEEEEcCCCCC---------------CCchhHHHHHHHHHHcCCCEEeehHHHHHHHHHh
Q 010866 361 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEF 408 (498)
Q Consensus 361 ~~~DGIilpGG~g~---------------~~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~ 408 (498)
.++|+|+||||++. +......++++.+.++++|+.+||-|-.+|+-+-
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 46899999999863 1235678889999999999999999999988543
No 55
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.48 E-value=0.034 Score=56.98 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=38.6
Q ss_pred cCCCEEEEcCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 361 ~~~DGIilpGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
..+|.|++|||++.. ......++++.+.++++|+.+||-|-++|+-
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 468999999998642 3356788899999999999999999998873
No 56
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.45 E-value=0.01 Score=53.67 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=37.6
Q ss_pred cCCCEEEEcCC--C-CCCC------chhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 361 KGADGILVPGG--F-GNRG------VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 361 ~~~DGIilpGG--~-g~~~------~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
..+|.|++||| + +... .....+.++++.++++|+.+||-|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 57899999999 6 5422 245677899999999999999999998883
No 57
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.42 E-value=0.017 Score=53.45 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY-lNvd 46 (498)
|+.|.++| .||-||-..+..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 56788898 78999999999999999999999999999997 5666
No 58
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=95.38 E-value=0.02 Score=53.93 Aligned_cols=44 Identities=18% Similarity=0.107 Sum_probs=37.8
Q ss_pred CCCEEEEcCCCCCC--CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 362 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 362 ~~DGIilpGG~g~~--~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.+|.|++|||.+.. .....++.++.+.++++|+.+||-|-.+|+
T Consensus 74 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 119 (212)
T 3efe_A 74 SKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALA 119 (212)
T ss_dssp TTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHH
T ss_pred CCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHH
Confidence 78999999998754 235678889999999999999999998877
No 59
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=95.34 E-value=0.025 Score=53.39 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=37.6
Q ss_pred CCCEEEEcCCCCCC-CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 362 GADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 362 ~~DGIilpGG~g~~-~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.+|.|++|||.|.. .....+++++.+.++++|+.+||-|-++|+
T Consensus 63 ~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 107 (206)
T 3f5d_A 63 NFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLA 107 (206)
T ss_dssp CCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHH
T ss_pred CCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 68999999998754 334567889999999999999999999887
No 60
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=95.24 E-value=0.01 Score=56.71 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.1
Q ss_pred cCCCEEEEcCCCCCC--------------CchhHHHHHHHHHHcCCCEEeehHHHHHHHHH
Q 010866 361 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (498)
Q Consensus 361 ~~~DGIilpGG~g~~--------------~~~g~i~~i~~a~e~~iPiLGIClGmQll~va 407 (498)
.++|+|++|||+|.. ......++++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 468999999998741 13457788999999999999999999998865
No 61
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=95.22 E-value=0.025 Score=53.00 Aligned_cols=45 Identities=20% Similarity=0.107 Sum_probs=39.1
Q ss_pred ccCCCEEEEcCCCCCC--CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 360 LKGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 360 l~~~DGIilpGG~g~~--~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
...+|.|++|||.+.. . +..+++++.+.++++++.+||-|-.+|+
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~~~g~~iaaIC~G~~~La 115 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCAAHGMALGGLWNGAWFLG 115 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHHHHTCEEEEETTHHHHHH
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHHhhCCEEEEECHHHHHHH
Confidence 4578999999998753 3 6778899999999999999999998887
No 62
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.04 E-value=0.054 Score=55.51 Aligned_cols=46 Identities=22% Similarity=0.340 Sum_probs=38.7
Q ss_pred cCCCEEEEcCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHHH
Q 010866 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (498)
Q Consensus 361 ~~~DGIilpGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~v 406 (498)
..+|.|++|||.+.. ......+.++.+.++++|+.+||-|-++|+-
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~ 136 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAA 136 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHh
Confidence 568999999998642 2356788899999999999999999999884
No 63
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=94.98 E-value=0.24 Score=51.98 Aligned_cols=40 Identities=28% Similarity=0.493 Sum_probs=36.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~-g~~v~~~K~DpYl 43 (498)
+.|.++| .+|.||=.+++.|+..|+.+ |++|.++..|||-
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 5677885 49999999999999999999 9999999999985
No 64
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=94.91 E-value=0.031 Score=52.42 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=59.7
Q ss_pred eEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecC-CCccc-cc--cCCChhhhHHHHHhc--cCCCEEEEcC
Q 010866 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLED-AT--EKENPDAYKAAWKLL--KGADGILVPG 370 (498)
Q Consensus 298 v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~s-e~l~~-~~--~~~~p~~y~~~~~~l--~~~DGIilpG 370 (498)
.||+++- |..+.+ ......+.|+.+|+++.+. -... ..+.. .. +..+. ..+.+ ..+|.|++||
T Consensus 10 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~g~~~v~~~~G~~v~~d~-----~l~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVPV-AHGSEEMETVIIVDTLVRAGFQVTMA----AVGDKLQVQGSRGVWLTAEQ-----TLEACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ESSSCSEEECTTSCEEECSE-----EGGGCCGGGCSEEEECC
T ss_pred CeEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEE----EcCCCcceecCCCcEEeCCC-----CHHHCCCcCCCEEEECC
Confidence 3677774 543432 3456789999999766543 1110 01110 00 00000 01222 4689999999
Q ss_pred CCCC-C---CchhHHHHHHHHHHcCCCEEeehHHH-HHHH
Q 010866 371 GFGN-R---GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (498)
Q Consensus 371 G~g~-~---~~~g~i~~i~~a~e~~iPiLGIClGm-Qll~ 405 (498)
|.+. . ......++++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 9742 1 33567888999999999999999998 7776
No 65
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.78 E-value=0.2 Score=48.66 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|-|.|+++ -.|.||=.+|+.|+..|..+|++|-++.+||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57777764 58899999999999999999999999999994
No 66
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=94.75 E-value=0.017 Score=59.50 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+|-|||||==. ++||+.++..+-+.|+.+|++|..++.-.+
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqt 209 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQT 209 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCce
Confidence 36799999777 599999999999999999999999887665
No 67
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.74 E-value=0.015 Score=54.73 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=38.3
Q ss_pred cCCCEEEEcCCCCCC----CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~~----~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
..+|+|++|||.+.. ......+.++++.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 478999999998742 345678899999999999999999999877
No 68
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=94.67 E-value=0.11 Score=57.82 Aligned_cols=95 Identities=12% Similarity=0.063 Sum_probs=61.4
Q ss_pred eEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCC--
Q 010866 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN-- 374 (498)
Q Consensus 298 v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~-- 374 (498)
.||||+-.-+...+ ....+..+|+.+|+.+.+. .+. ... .+. - .|.. .....+|+|+||||...
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aGa~V~vV------sp~-~g~-GvD--~-t~~~--~~s~~fDAVvlPGG~~~~~ 604 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVI------AEY-LAS-GVD--Q-TYSA--ADATAFDAVVVAEGAERVF 604 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEE------ESS-CCT-TCC--E-ETTT--CCGGGCSEEEECTTCCTTT
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEE------eCC-CCC-Ccc--c-Cccc--CChhcCcEEEECCCccccc
Confidence 47888732121221 4678899999999988764 221 100 000 0 0000 01246899999999632
Q ss_pred ---------CCchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 375 ---------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 375 ---------~~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
+.....+..++.+.+.+||+..||-|-|+|.
T Consensus 605 ~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 605 SGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp STTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred ccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 1224578899999999999999999999998
No 69
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.54 E-value=0.078 Score=54.76 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=61.2
Q ss_pred CeEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCC-ccc-ccc-CCChhhhHHHHHhc--cCCCEEEEcC
Q 010866 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LED-ATE-KENPDAYKAAWKLL--KGADGILVPG 370 (498)
Q Consensus 297 ~v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~-l~~-~~~-~~~p~~y~~~~~~l--~~~DGIilpG 370 (498)
..+|+++- |..+.+ ......+.|+.+|+++.+. -..... +.. ... .-.|. ...+.+ ..+|.|+|||
T Consensus 10 mkkV~ILl-~dgf~~~El~~p~dvL~~Ag~~v~vv----S~~~g~~V~ss~G~~~i~~d---~~l~~v~~~~~DaLiVPG 81 (365)
T 3fse_A 10 KKKVAILI-EQAVEDTEFIIPCNGLKQAGFEVVVL----GSRMNEKYKGKRGRLSTQAD---GTTTEAIASEFDAVVIPG 81 (365)
T ss_dssp -CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEE----ESSSSCCEECTTSCCEECCS---EETTTCCGGGCSEEEECC
T ss_pred ceEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEE----ECCCCceeecCCCceEEeCC---CCHhhCCCcCCCEEEEEC
Confidence 34788874 554443 3456789999998765542 111110 100 000 00000 001222 2589999999
Q ss_pred CCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 371 G~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
|.|.. ......+.++.+.++++|+.+||-|-.+|+
T Consensus 82 G~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA 119 (365)
T 3fse_A 82 GMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLI 119 (365)
T ss_dssp BTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred CcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 98642 335678889999999999999999999887
No 70
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.43 E-value=0.034 Score=55.72 Aligned_cols=108 Identities=13% Similarity=0.079 Sum_probs=68.6
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEcccCC-ccchH-HHHHHHHHHcCCc-ceeeeEEEEecCCCccccccCCChhhhHHHHH
Q 010866 282 KEWTSRAEICDGLHEPVRIAMVGKYTG-LSDAY-LSILKALLHASVD-LRKKLVIDWIPACDLEDATEKENPDAYKAAWK 358 (498)
Q Consensus 282 ~~W~~lv~~v~~~~~~v~IaIVgkY~~-l~day-~SI~~AL~~aG~~-~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~ 358 (498)
.-|+.|++.... ...+|++|. +-. ..+.| ....++|+..|+. +.+. +-.+.+. ..+| +..+
T Consensus 43 ~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~v~~L------~i~~r~~---a~~~----~~~~ 106 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKELKVL------DIRDRAQ---GDDS----GYRL 106 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSEEEEC------CCCSGGG---GGCH----HHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCeeEEE------EecCccc---cCCH----HHHH
Confidence 346667766643 246999995 542 22334 3467788888884 3321 2211110 0111 2235
Q ss_pred hccCCCEEEEcCCCCCC-----CchhHHHHHHHHHHcC-CCEEeehHHHHHHH
Q 010866 359 LLKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 405 (498)
Q Consensus 359 ~l~~~DGIilpGG~g~~-----~~~g~i~~i~~a~e~~-iPiLGIClGmQll~ 405 (498)
.+.++|+|+++||--.+ ...+..++++.+.+++ +|+.|.|-|.-+|+
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 67899999999974322 1256788999999999 99999999998876
No 71
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.38 E-value=0.41 Score=50.60 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|+++|- +|.||=.+++.|+..|+.+|++|.++..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46777775 99999999999999999999999999999973
No 72
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=94.25 E-value=0.039 Score=52.88 Aligned_cols=47 Identities=17% Similarity=0.076 Sum_probs=39.2
Q ss_pred hccCCCEEEEcCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 359 LLKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 359 ~l~~~DGIilpGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.+..+|.|++|||+|.. ..+..+++++.+.++++++.+||-|-.+|+
T Consensus 62 ~~~~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La 111 (231)
T 3noq_A 62 DCPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLG 111 (231)
T ss_dssp TCCCCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred HCCcCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 34578999999998753 335678889999999999999999998877
No 73
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=94.08 E-value=0.043 Score=61.45 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=61.1
Q ss_pred eEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCCccc-c--ccCCChhhhHHHHHhc--cCCCEEEEcCC
Q 010866 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED-A--TEKENPDAYKAAWKLL--KGADGILVPGG 371 (498)
Q Consensus 298 v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~l~~-~--~~~~~p~~y~~~~~~l--~~~DGIilpGG 371 (498)
.||+|+= ...+.+ ...++.++|+.+|+.+.+. -.....+.. . .+..+- ..+.. ..+|+|+||||
T Consensus 601 rKVaILl-aDGfEe~El~~pvdaLr~AG~~V~vV----S~~~g~V~gs~G~~V~aD~-----t~~~v~s~~fDALVVPGG 670 (753)
T 3ttv_A 601 RVVAILL-NDEVRSADLLAILKALKAKGVHAKLL----YSRMGEVTADDGTVLPIAA-----TFAGAPSLTVDAVIVPCG 670 (753)
T ss_dssp CEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEEE----ESSSSEEECTTSCEEECCE-----ETTTSCGGGCSEEEECCS
T ss_pred CEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEEE----EcCCCeEEeCCCCEEeccc-----chhhCCCcCCCEEEECCC
Confidence 4788873 333332 4678899999999876653 111111100 0 000000 00111 24899999999
Q ss_pred CCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 372 FGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 372 ~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
|.. .....++.++.+.+.++|+.+||-|-++|+
T Consensus 671 -g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 671 -NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp -CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred -ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 643 335678899999999999999999999887
No 74
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=94.05 E-value=0.56 Score=49.36 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+.|.++|. +|.||=.+++.|+.+|+.+|.+|.++-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 57888875 8999999999999999999999999999976
No 75
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=94.03 E-value=0.096 Score=48.79 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~-g~~v~~~K~DpY 42 (498)
+|.|.|+++ -.|.||=.+|+.++..|..+ |++|-++.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 76
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=93.87 E-value=0.15 Score=47.24 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|| |.|+ | -.|.||=.+|+.++..|..+|+||-++.+||-
T Consensus 1 mk-I~vs-~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVA-G-KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEE-C-SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEe-c-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 67 5555 4 89999999999999999999999999999994
No 77
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.65 E-value=0.023 Score=54.72 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=37.6
Q ss_pred cCCCEEEEcCCCCCC----CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~~----~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.++|+|++|||.+.. ......++++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 368999999998742 235678899999999999999999998776
No 78
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=93.40 E-value=0.032 Score=54.47 Aligned_cols=45 Identities=16% Similarity=0.083 Sum_probs=38.0
Q ss_pred cCCCEEEEcCCCCCC----CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~~----~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.++|+|++|||.|.. ......+.++++.++++|+.+||-|-++|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 468999999999752 235677889999999999999999998876
No 79
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=93.31 E-value=0.035 Score=52.42 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=37.5
Q ss_pred cCCCEEEEcCCCCCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
..+|.|++|||++.. .....++.++.+.++++|+.+||-|-.+|+
T Consensus 64 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La 111 (211)
T 3mgk_A 64 NIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLS 111 (211)
T ss_dssp SSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHH
T ss_pred CCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHH
Confidence 347999999998653 234678889999999999999999998887
No 80
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=93.18 E-value=0.035 Score=53.98 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.1
Q ss_pred cCCCEEEEcCCCCC----CCchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 361 ~~~DGIilpGG~g~----~~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.++|+|++|||.+. +......+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 46899999999874 2335677889999999999999999998886
No 81
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=92.58 E-value=0.17 Score=49.39 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNv 45 (498)
+|.|.|+ | -.|.||=.+|+.|+..|..+|++|-++.+||.-|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 82
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=92.23 E-value=0.09 Score=51.30 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=37.0
Q ss_pred CCCEEEEcCCC-CCC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 362 GADGILVPGGF-GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 362 ~~DGIilpGG~-g~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.+|.|+||||. |.. .....+++++.+.++++++.+||-|-.+|+
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa 131 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILG 131 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46999999998 642 345678889999999999999999998877
No 83
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=92.15 E-value=0.23 Score=55.54 Aligned_cols=102 Identities=15% Similarity=0.059 Sum_probs=62.5
Q ss_pred eEEEEEcccCCccc-hHHHHHHHHHHcCCcceeeeEEEEecCCCccc-c--ccCCChhhhHHHHHh--ccCCCEEEEcCC
Q 010866 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED-A--TEKENPDAYKAAWKL--LKGADGILVPGG 371 (498)
Q Consensus 298 v~IaIVgkY~~l~d-ay~SI~~AL~~aG~~~~v~v~i~~I~se~l~~-~--~~~~~p~~y~~~~~~--l~~~DGIilpGG 371 (498)
.+|+|+- +..+.. ......++|+.+|+++.+. ......+.. . .+..+. ..+. ...+|+|+||||
T Consensus 535 rkVaILl-~dGfe~~El~~p~dvL~~AG~~V~iv----S~~gg~V~ss~G~~v~~d~-----~l~~v~~~~yDaViVPGG 604 (715)
T 1sy7_A 535 RRVAIII-ADGYDNVAYDAAYAAISANQAIPLVI----GPRRSKVTAANGSTVQPHH-----HLEGFRSTMVDAIFIPGG 604 (715)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEE----ESCSSCEEBTTSCEECCSE-----ETTTCCGGGSSEEEECCC
T ss_pred CEEEEEE-cCCCCHHHHHHHHHHHHhcCCEEEEE----ECCCCceecCCCceEeccc-----ccccCCcccCCEEEEcCC
Confidence 4788884 543332 3456789999999766543 211111100 0 000000 0011 235899999999
Q ss_pred CCC-C---CchhHHHHHHHHHHcCCCEEeehHHHHHHHHHhc
Q 010866 372 FGN-R---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFA 409 (498)
Q Consensus 372 ~g~-~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~va~g 409 (498)
.+. . .....+.+++.+.++++|+.+||-|-.+|+-++|
T Consensus 605 ~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 605 AKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred cccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 532 1 2345778899999999999999999999986544
No 84
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=92.02 E-value=0.05 Score=54.12 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.1
Q ss_pred ccCCCEEEEcCCCCCC-C---chhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 360 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 360 l~~~DGIilpGG~g~~-~---~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
..++|+||||||.|.. . .....++++++.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 3578999999998754 2 24577889999999999999999998665
No 85
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=91.90 E-value=0.26 Score=54.89 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=60.9
Q ss_pred eEEEEEccc-CCcc-chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCC-C-
Q 010866 298 VRIAMVGKY-TGLS-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G- 373 (498)
Q Consensus 298 v~IaIVgkY-~~l~-day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~-g- 373 (498)
.||+|+-.- .... .....+..+|+.+|+.+.+. .. .... .+ |- .|.+ .....+|+|+||||. |
T Consensus 530 ~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV------s~-~~g~-~v--D~-t~~~--~~s~~fDAVvlPGG~~g~ 596 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV------AE-RXAN-NV--DE-TYSA--SDAVQFDAVVVADGAEGL 596 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE------ES-SCCT-TC--CE-ESTT--CCGGGCSEEEECTTCGGG
T ss_pred CEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE------ec-cCCc-cc--cc-chhc--CCccccCeEEecCCCccc
Confidence 488887520 1122 24678899999999988764 11 1110 00 00 0100 012468999999994 3
Q ss_pred ---------------CC---CchhHHHHHHHHHHcCCCEEeehHHHHHHH
Q 010866 374 ---------------NR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (498)
Q Consensus 374 ---------------~~---~~~g~i~~i~~a~e~~iPiLGIClGmQll~ 405 (498)
.. .....++.++.+.+.+||+-.||-|-++|.
T Consensus 597 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 597 FGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp CCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred ccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 11 224578889999999999999999999887
No 86
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=91.43 E-value=1.6 Score=45.73 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++| . +|-||=.+++.|+.+|+.+|.+|.++..|+|-
T Consensus 99 ~vi~i~G-~-~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG-L-QGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC-C-TTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 3 99999999999999999999999999999873
No 87
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=91.04 E-value=0.3 Score=45.77 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
+|.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888885 5899999999999999999999999999999
No 88
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=90.93 E-value=0.32 Score=45.03 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+|.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 488888885 57999999999999999999999999999994
No 89
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=90.53 E-value=2 Score=44.09 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=94.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~YeRf~~~ 80 (498)
+|-|||||= =+++||=.++..|-+.|+.+|+++.++| |-|-|..- ...|-..|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~-------------tgqtg~~~-~~~gi~~Da----------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLA-------------TGQTGVML-EGDGVALDA----------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEEC-------------CSHHHHHH-HSCSCCGGG-----------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEe-------------ccchhhhh-hcCCcchhH-----------
Confidence 367899986 6779999999999999999999999854 22444211 112222221
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEee-CccccccCcchH
Q 010866 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIEL-GGTIGDIESMPF 159 (498)
Q Consensus 81 ~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~Ei-GGTvGdiEs~pf 159 (498)
-.....+| ++.+.+.++. .++|+++||= ||-.-=. +...
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~~--------~~~d~vlVEGqGgl~~P~-~~~t 245 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRYG--------KNYDILHIEGQGSLLHPG-STAT 245 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHHT--------TTCSEEEECCCCCTTSTT-CCTH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHhc--------cCCCEEEEeCCCcccCcC-hHhH
Confidence 00111122 3333344443 3689999994 4444333 3223
Q ss_pred HHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhc--------CCCcccEEEEecCCC
Q 010866 160 IEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTVA 221 (498)
Q Consensus 160 ~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs--------~GI~pd~lV~Rs~~~ 221 (498)
+ .+-+...+.-++.+|-.=...+..--++.--|-+|.+...+. .|+++-++++.....
T Consensus 246 ~----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~~ 311 (349)
T 2obn_A 246 L----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAHL 311 (349)
T ss_dssp H----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTTS
T ss_pred H----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCC
Confidence 3 333444556699999876777765556666777877776664 689999999987653
No 90
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=89.92 E-value=0.4 Score=44.00 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY-lNvd 46 (498)
++.|.++| -||-||-.....|-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 36788888 79999999999999999999999999999983 3555
No 91
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=89.59 E-value=0.36 Score=51.95 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=33.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 010866 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (498)
Q Consensus 3 ~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNv 45 (498)
-|++++| -.|.||-.+|++++..|..+|.+|-++-.||.-|.
T Consensus 328 ~~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 328 GLIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred eEEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 3445544 57899999999999999999999999999997554
No 92
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=88.72 E-value=0.48 Score=45.00 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
+|.|.|+++ -.|.||=.+|+.++..|. +|++|-++.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467778766 589999999999999999 999999999999754
No 93
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=88.71 E-value=0.53 Score=44.43 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+|.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888876 57999999999999999999999999999995
No 94
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=88.44 E-value=0.64 Score=46.58 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd 46 (498)
+|.|-|+| =-|+||=.||+.|+..|..+|+||-++=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 48899995 668999999999999999999999999999988753
No 95
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=88.43 E-value=0.57 Score=44.69 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+|-|+|+++ -.|.||=.+|+.|+..|..+|++|-++.+||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 367888876 479999999999999999999999999999986
No 96
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=87.81 E-value=0.68 Score=44.64 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
||-|.|+ | =-|.||=.+|+.|+..|..+|++|-++-+||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 97
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=87.50 E-value=0.67 Score=43.86 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
||-|.|+ | =-|.||=.+|+.|+..|..+|++|-++-+||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888885 5 8899999999999999999999999999999654
No 98
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=86.54 E-value=0.57 Score=46.63 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=36.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
||-|+||+| -.|.||=.+|++++..|..+|+||-++-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 466777777 78999999999999999999999999999984
No 99
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=85.80 E-value=0.78 Score=43.50 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
||.|.|+++ -.|.||=.+|+.|+..|..+|++|-++.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 467888864 5789999999999999999999999999999644
No 100
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=85.46 E-value=0.99 Score=41.36 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+|-|+||++ -.|.||=.+|+.|+..|..+|+||-. +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 478899875 57899999999999999999999998 56744
No 101
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=83.71 E-value=7 Score=38.41 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++| .+|.||=.+++.++.+++..|.+|.++-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5678885 499999999999999999999999999999874
No 102
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=83.62 E-value=1.1 Score=45.16 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
||-|+|++| -.|.||=.+|++++..|..+|+||-++-+||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777776 68999999999999999999999999999984
No 103
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=83.46 E-value=0.41 Score=44.38 Aligned_cols=44 Identities=20% Similarity=0.053 Sum_probs=31.6
Q ss_pred ccCCCEEEEcCCCCC-C---CchhHHHHHHHHHH-cCCCEEeehHHHHH
Q 010866 360 LKGADGILVPGGFGN-R---GVQGKILAAKYARE-HRIPYLGICLGMQV 403 (498)
Q Consensus 360 l~~~DGIilpGG~g~-~---~~~g~i~~i~~a~e-~~iPiLGIClGmQl 403 (498)
..++|+|++|||.+. . ..+...++++.+.+ .++|+..||-|..+
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l 119 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLT 119 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHH
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccc
Confidence 346899999999642 2 23456677777654 47899999999743
No 104
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=83.21 E-value=0.86 Score=40.23 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|++|+++|. +|-||...+..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 789999995 899999999999999999999887773
No 105
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=83.20 E-value=0.27 Score=47.42 Aligned_cols=45 Identities=22% Similarity=0.170 Sum_probs=32.0
Q ss_pred ccCCCEEEEcCC-CCCC---CchhHHHHHHHHHHcCC-CEEeehHHHHHHHH
Q 010866 360 LKGADGILVPGG-FGNR---GVQGKILAAKYAREHRI-PYLGICLGMQVAVI 406 (498)
Q Consensus 360 l~~~DGIilpGG-~g~~---~~~g~i~~i~~a~e~~i-PiLGIClGmQll~v 406 (498)
...+|.|++||| +|.+ .....++++ +.++++ |+.+||-|-.+|+-
T Consensus 78 ~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~ 127 (236)
T 3bhn_A 78 VKEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHE 127 (236)
T ss_dssp GGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHH
T ss_pred ccCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHH
Confidence 467899999999 5643 223445555 334455 99999999998873
No 106
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=82.99 E-value=1.2 Score=44.93 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=41.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDA 47 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~ 47 (498)
||.|.|+++ --|.||=.+|+.+|..|..+|+||-++=+||.-|.-.
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~~ 46 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQ 46 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTHH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChhh
Confidence 788989877 6899999999999999999999999999999866543
No 107
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=80.91 E-value=1.4 Score=42.39 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.7
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 3 ~i~vtGg-v~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
-|.|++. .-.|.||=.+|+.|+..|..+|++|-++.+||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3555543 56789999999999999999999999999999865
No 108
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=79.13 E-value=2.1 Score=42.11 Aligned_cols=155 Identities=18% Similarity=0.270 Sum_probs=91.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-------ccCCCCCCCccccceEEEccCCccccCCCCc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-------LNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY-------lNvd~gtmsP~~HgEvfV~~dG~E~DlDlG~ 73 (498)
+|-|+|||. -.|.||=.+|+.|+..|...|.||-++..||. +++++ +.| -+|+
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~~~---- 163 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LSEY---- 163 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 367888864 47999999999999999999999999999983 33222 111 0010
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCCCCCccE
Q 010866 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGKEGPVDV 142 (498)
Q Consensus 74 YeRf~~~~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPH-----------it~ei~~~i~~~~~~pvd~~~~~~dv 142 (498)
|. .. .-..++|.+-.. ..+.|+|- -.+.+++.+..+. ..+|+
T Consensus 164 ----L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 216 (299)
T 3cio_A 164 ----LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN--------DHYDL 216 (299)
T ss_dssp ----HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH--------hCCCE
Confidence 00 00 012233332110 22445542 1245666666664 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecC
Q 010866 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (498)
Q Consensus 143 ~i~EiGGTvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~ 219 (498)
|||+..+..+-- +|. .+.... + ..+++.- .+....+-++.+++.|++.|+..-++|+-..
T Consensus 217 VIIDtpp~~~~~------d~~-~l~~~a--d------~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~~ 276 (299)
T 3cio_A 217 VIVDTPPMLAVS------DAA-VVGRSV--G------TSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAILNGV 276 (299)
T ss_dssp EEEECCCTTTCT------HHH-HHGGGC--S------EEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred EEEcCCCCchhH------HHH-HHHHHC--C------EEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 999999876421 111 111111 1 1222222 3455566788899999999998888887543
No 109
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=79.07 E-value=1.8 Score=43.81 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNv 45 (498)
+|.|.|++| -.|.||=.+|+.++..|..+|++|-++-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 478888887 68999999999999999999999999999976554
No 110
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=78.94 E-value=2 Score=46.13 Aligned_cols=39 Identities=31% Similarity=0.529 Sum_probs=35.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|++|++|- .|.||=.+|++++..|..+|+||-++-.||-
T Consensus 9 ~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 9 PYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp SEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 67777764 9999999999999999999999999999983
No 111
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=78.53 E-value=1.9 Score=43.77 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~--~~g~~v~~~K~DpY 42 (498)
+|++|++| -.|.||=.+|++++..|. .+|.+|-++-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 36788877 889999999999999999 99999999999985
No 112
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=78.45 E-value=1.8 Score=43.61 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=35.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
|++|++| -.|.||=.+|++++..|..+|.+|-++-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5666555 789999999999999999999999999999743
No 113
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=78.18 E-value=2.7 Score=40.77 Aligned_cols=156 Identities=13% Similarity=0.145 Sum_probs=90.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc-------cCCCCCCCccccceEEEccCCccccCCCCc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL-------NTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl-------Nvd~gtmsP~~HgEvfV~~dG~E~DlDlG~ 73 (498)
+|-|+||+. -.|.||=.+|+.|+..|..+|.||-++-.||.- ++++ +.| -+|+
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~~~l~~~~~~~~------~~g---------l~~~---- 141 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPN------NEG---------LSSL---- 141 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSSSCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 467888875 568999999999999999999999999999642 1111 011 0110
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccc-----------hHHHHHHHHHHhcccCCCCCCCccE
Q 010866 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHI-----------TDEIQDWIERVAMIPVDGKEGPVDV 142 (498)
Q Consensus 74 YeRf~~~~l~~~~n~t~G~iy~~vi~kER~g~ylG~tvQviPHi-----------t~ei~~~i~~~~~~pvd~~~~~~dv 142 (498)
|. .. .-..++|.+-. ...+.++|-- .+.+++.+..+. ..+|+
T Consensus 142 ----L~----~~------~~l~~~i~~~~-----~~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 194 (271)
T 3bfv_A 142 ----LL----NW------STYQDSIISTE-----IEDLDVLTSGPIPPNPSELITSRAFANLYDTLL--------MNYNF 194 (271)
T ss_dssp ----HT----TS------SCHHHHEEECS-----STTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----hC----CC------CCHHHcEEeCC-----CCCEEEEECCCCCCCHHHHhChHHHHHHHHHHH--------hCCCE
Confidence 00 00 01233333211 1235555431 234566666664 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCC
Q 010866 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTV 220 (498)
Q Consensus 143 ~i~EiGGTvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs~~ 220 (498)
|||...+...-.. ..++.+. . + ..++|.- .+....+-++.+++.|++.|+..-++|+-...
T Consensus 195 VIIDtpp~~~~~d----~~~l~~~---a--D------~vilVv~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~~~ 255 (271)
T 3bfv_A 195 VIIDTPPVNTVTD----AQLFSKF---T--G------NVVYVVN--SENNNKDEVKKGKELIEATGAKLLGVVLNRMP 255 (271)
T ss_dssp EEEECCCTTTCSH----HHHHHHH---H--C------EEEEEEE--TTSCCHHHHHHHHHHHHTTTCEEEEEEEEEEC
T ss_pred EEEeCCCCchHHH----HHHHHHH---C--C------EEEEEEe--CCCCcHHHHHHHHHHHHhCCCCEEEEEEeCCc
Confidence 9999988654311 1112111 1 1 1233322 34444556778888999999988888776543
No 114
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=78.10 E-value=1.1 Score=44.48 Aligned_cols=72 Identities=26% Similarity=0.233 Sum_probs=48.5
Q ss_pred CeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC
Q 010866 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (498)
Q Consensus 297 ~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~ 376 (498)
.+||+++.+...- ...+.+.|+..|+++.+. . +.- +.+..+|.||.-||=|.
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~------~-~~~----------------~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELF------N-QPS----------------EELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEE------S-SCC----------------GGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEc------c-ccc----------------cccCCCCEEEEECCCHH--
Confidence 4789999865522 567888999999876543 1 110 24567899999997331
Q ss_pred chhHHHHHHHHHHcCCCEEeehHH
Q 010866 377 VQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 377 ~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
.+.+++.+... +|++||=+|
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECS
T ss_pred ---HHHHHHHhCCC-CcEEEECCC
Confidence 34555555445 999999876
No 115
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=77.80 E-value=1.8 Score=43.17 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
|-|+||+| --|.||=.+|+.++..|..+|+||-++-.||.-
T Consensus 19 ~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 19 LKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred CEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 34566666 689999999999999999999999999999953
No 116
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=77.67 E-value=2.3 Score=40.65 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=28.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|| |+||||- |-+.+.|-+.|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78 9999964 7888999999999999999985543
No 117
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=77.01 E-value=1.6 Score=44.26 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=36.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~--~~g~~v~~~K~DpYlN 44 (498)
|-|.||+| --|.||=.+|++++..|. .+|.||-++..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34566666 789999999999999999 9999999999998533
No 118
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=76.15 E-value=3.3 Score=36.75 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
++|++||+ +|-||...+.-|...|+.+|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 6889999999999999999998853
No 119
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=76.13 E-value=2.7 Score=38.80 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=34.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
|.|.|+++ =.|.||=.+|+.++..|..+| +|.++.+||.-
T Consensus 1 kvI~v~s~-KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~ 40 (209)
T 3cwq_A 1 MIITVASF-KGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNR 40 (209)
T ss_dssp CEEEEEES-STTSSHHHHHHHHHHHHHTTS-CEEEEEECTTC
T ss_pred CEEEEEcC-CCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCC
Confidence 34566643 578999999999999999999 99999999964
No 120
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=73.23 E-value=1.4 Score=39.86 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
++|.|+| .||-||...+..|...|..+|++|..++.
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 121
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.13 E-value=2 Score=39.71 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
||-++||||- +|||+.++ +.|.++|++|.+.=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 7899999996 78887554 5677889998876443
No 122
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=71.78 E-value=21 Score=30.74 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=29.0
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeehHHHHHH
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVA 404 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIClGmQll 404 (498)
.+.++++..|+-+ -++.+.|++.++.++|=|+|+++-
T Consensus 82 g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 82 KPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp CCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 4567888777632 367788899999999999999864
No 123
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=71.48 E-value=5.4 Score=39.86 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+.|.|+| . +|-||=.+++.|+.+|+..|.+|.++-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999986
No 124
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=71.11 E-value=3 Score=37.90 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=34.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|+.+.|+| -||-||=..+..|..+++.+|+++-.+|+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 47788999 79999999999999999999999999999874
No 125
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=70.29 E-value=2.5 Score=44.25 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++|- .|.||=.+++.|+..|+.+|++|.++-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 36788883 89999999999999999999999999999984
No 126
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=68.04 E-value=5.2 Score=39.17 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|.|.||++ -.|.||=.+|+.|+..|...|.+|-++-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 67888875 46899999999999999999999999999985
No 127
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=67.88 E-value=7.1 Score=38.84 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++|- +|-||=.+++.|+.+|+..|.+|.++-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57889983 99999999999999999999999999999863
No 128
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=67.06 E-value=5.2 Score=35.14 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=27.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
++|++||+ +|-||...+.-|...|...|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~ 33 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSL 33 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 47899998 6779999999999999888987653
No 129
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=66.20 E-value=2.2 Score=38.72 Aligned_cols=31 Identities=39% Similarity=0.633 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGL 32 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~----g~ll~~~g~ 32 (498)
|-+-++|=|+||+|+|----|+ -..++..||
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF 39 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGF 39 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSS
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCC
Confidence 5678999999999999988887 556677776
No 130
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=65.75 E-value=6.3 Score=38.86 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=34.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~-~g~~v~~~K~DpY 42 (498)
+.|.++|- +|.||=.+++.|+.+|+. +|.+|.++-.|||
T Consensus 106 ~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 106 KYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp SEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 35677764 799999999999999995 8999999999997
No 131
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=65.03 E-value=4.8 Score=37.41 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
||-|+||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7889999984 6777654 46677889999886443
No 132
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=64.70 E-value=4.8 Score=37.83 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
||-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7889999996 8999764 45677789988765
No 133
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=62.57 E-value=9.2 Score=39.36 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=51.9
Q ss_pred eEEEEEcccCC--ccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhh------hHHHH-HhccCCCEEEE
Q 010866 298 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDA------YKAAW-KLLKGADGILV 368 (498)
Q Consensus 298 v~IaIVgkY~~--l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~------y~~~~-~~l~~~DGIil 368 (498)
-+|+||+|+.. .......+.+.|...|+.+.+. -.. ++++........+.. +.... +.-..+|-+|.
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~ 114 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVE--KKV--LEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 114 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEE--HHH--HHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEE
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEe--hHH--hhhhccccccccccccccccccccChhhcccCCCEEEE
Confidence 37999999873 2234667889999988665442 000 000000000000000 00000 11246899999
Q ss_pred cCCCCCCCchhHHHHHHHHHHcCCCEEeehHH
Q 010866 369 PGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 369 pGG~g~~~~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
-||=|. .+.+++.+...++|++||=+|
T Consensus 115 lGGDGT-----~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 115 LGGDGT-----LLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp ESSTTH-----HHHHHHHCSSSCCCEEEEESS
T ss_pred EcChHH-----HHHHHHHhccCCCCEEEEcCC
Confidence 998552 456666666678999999876
No 134
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=62.15 E-value=9.3 Score=37.67 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++| .+|.||=.+++.++..|..+|.+|.++-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677776 499999999999999999999999999999974
No 135
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=61.72 E-value=10 Score=38.33 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH------CCCeeEEeeeccccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA------CGLRVTCIKIDPYLN 44 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~------~g~~v~~~K~DpYlN 44 (498)
+|-|.|++|- -|.||=.+|++++..|.. +|++|-++=+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 3667777654 789999999999999984 799999999999654
No 136
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=61.08 E-value=6 Score=33.99 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=31.3
Q ss_pred hccCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 359 ~l~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++.+|++|+.-|.-...-......|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 477899998877766655556667788899999999999
No 137
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=60.11 E-value=11 Score=34.09 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=35.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
..|.++|+ ||-||-..+..|..+|+..|.+|...-.|.+..
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~~ 63 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHIV 63 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCcccC
Confidence 57889997 888999999999999999999999888887643
No 138
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=59.54 E-value=9.3 Score=34.21 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
++|++||+ +|-||...+.-|...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 57999996 78899999999999999999998543
No 139
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=58.86 E-value=12 Score=40.00 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++|- .|.||=.+++.|+..|+.+|.+|.++-.|||-
T Consensus 102 ~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 45777754 79999999999999999999999999999974
No 140
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=58.21 E-value=9.1 Score=36.38 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=31.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|++|+++|. +|-||...|..|...|...|+.+..+-.|.
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~ 42 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDL 42 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchH
Confidence 478999997 899999999999999998998775443343
No 141
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=57.22 E-value=8.7 Score=38.97 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~------~~g~~v~~~K~DpYlNvd 46 (498)
+|-|.|++| --|.||=.+|++++..|. .+|++|-++-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 366777754 367899999999999998 689999999999976644
No 142
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=56.66 E-value=11 Score=39.22 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG 64 (498)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 6788888 569999999999999999998543 3443334 3332111134578888876
No 143
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=56.30 E-value=26 Score=31.71 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=54.5
Q ss_pred eEEEEEcccCCcc---chHHHHHHHHHHcCCcceeeeEEEEecCCCccccc---cCCChhhhHHHHHhccCCCEEEEcCC
Q 010866 298 VRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDAT---EKENPDAYKAAWKLLKGADGILVPGG 371 (498)
Q Consensus 298 v~IaIVgkY~~l~---day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~---~~~~p~~y~~~~~~l~~~DGIilpGG 371 (498)
+||=+.|.+.... ..|..+.+.|+..| .+- . .|+..+.++... .......|..-.+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 4777777765322 25678999999888 421 1 345443332210 01122244444456789999887443
Q ss_pred CCCCCchhHHHHHHHHHHcCCCEEeehH
Q 010866 372 FGNRGVQGKILAAKYAREHRIPYLGICL 399 (498)
Q Consensus 372 ~g~~~~~g~i~~i~~a~e~~iPiLGICl 399 (498)
....|..-.+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2234666678889999999999986
No 144
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=56.05 E-value=33 Score=31.31 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=22.4
Q ss_pred cC-CCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KG-ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~-~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.+ +||||+.+... ......++.+.+.++|+.-+
T Consensus 57 ~~~vdgii~~~~~~----~~~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 57 QAPPDALILAPNSA----EDLTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HSCCSEEEECCSST----TTTHHHHHHHHHTTCCEEEE
T ss_pred hCCCCEEEEeCCCH----HHHHHHHHHHHHCCCcEEEE
Confidence 46 99999987321 12235567777889999765
No 145
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=55.74 E-value=12 Score=33.67 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=25.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|| |+||||- |-+.+.+.+.|.++|++|..+--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 67 9999974 4455566677888899999886554
No 146
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=55.29 E-value=14 Score=34.52 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
+||.+.|. +|-||+..+.-|...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999985 799999999999999999999986554
No 147
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=55.10 E-value=10 Score=38.81 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
||++|++| -.|.||=.+|++++..|..+|.||-++-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 44999999999999999999999999987 63
No 148
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=55.04 E-value=53 Score=30.41 Aligned_cols=34 Identities=24% Similarity=0.214 Sum_probs=22.5
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+... ......++.+.+.++|+.-+.
T Consensus 68 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 68 EQPDGVMFAPTVP----QYTKGFTDALNELGIPYIYID 101 (304)
T ss_dssp TCCSEEEECCSSG----GGTHHHHHHHHHHTCCEEEES
T ss_pred cCCCEEEECCCCh----HHHHHHHHHHHHCCCeEEEEe
Confidence 5799999986421 122345667777799987553
No 149
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=54.56 E-value=14 Score=32.86 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|| |+||||- |-+.+.+-+.|.++|++|..+--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 56 8999974 4445566677888999999876553
No 150
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=54.51 E-value=15 Score=37.83 Aligned_cols=55 Identities=31% Similarity=0.491 Sum_probs=40.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCcc-----ccceEEEccCCccccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPF-----EHGEVFVLDDGGEVDLD 70 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~-----~HgEvfV~~dG~E~DlD 70 (498)
|.|-||| +=||+.|++=|+.+|++.|++|...- |+ | .|+ +.++++|.|=|. -+||
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g-----ni--g--~~~~~~~~~~~d~~VlE~~~-~~l~ 164 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVGG-----NI--G--LPALMLLDDECELYVLELSS-FQLE 164 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEEE-----SS--S--BCHHHHCCTTCCEEEEECCH-HHHH
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEec-----cc--C--HHHHHHhCCCCCEEEEECCc-hhhc
Confidence 5788888 56999999999999999999987542 32 1 122 456889988664 4443
No 151
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=54.00 E-value=13 Score=38.93 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG 64 (498)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 6788888 569999999999999999998543 3333333 3332111234578888876
No 152
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=53.85 E-value=12 Score=32.67 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999996 89999999999999888877544433
No 153
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.80 E-value=9.6 Score=32.20 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
+.|+|+|+ |-+..++...|..+|++|..+-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999887664
No 154
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=53.65 E-value=14 Score=37.86 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAGT----NGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeCC----cChHHHHHHHHHHHHHCCCCEEEE
Confidence 67888984 799999999999999999998765
No 155
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=53.27 E-value=9.1 Score=35.62 Aligned_cols=33 Identities=30% Similarity=0.480 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
+|-++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 3 ~k~vlVTGas-~GIG~a-----~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRA-----LTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 3789999986 777775 45667788999877643
No 156
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=52.50 E-value=14 Score=32.63 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
++|+++|- +|-||-..+..|...|..+|++|..+.-|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57889985 8999999999999999999999988766654
No 157
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=52.28 E-value=11 Score=35.16 Aligned_cols=31 Identities=29% Similarity=0.243 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
+|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 ~k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAA-----VEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEe
Confidence 4789999985 8999865 45667789988764
No 158
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=52.03 E-value=13 Score=38.04 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtGT----nGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTGT----NGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 67888884 799999999999999999998654
No 159
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=51.45 E-value=16 Score=32.57 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
++|++||+ +|-||...+.-|...|...+++|...
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 58999997 67899999999999999999988543
No 160
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=51.16 E-value=12 Score=37.00 Aligned_cols=93 Identities=26% Similarity=0.287 Sum_probs=46.3
Q ss_pred EEEEEcccCCc--cchHHHHHHHHHHcCCcceeeeEEEEecCCCcccccc-----C--C-ChhhhHHHHHhccCCCEEEE
Q 010866 299 RIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATE-----K--E-NPDAYKAAWKLLKGADGILV 368 (498)
Q Consensus 299 ~IaIVgkY~~l--~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~-----~--~-~p~~y~~~~~~l~~~DGIil 368 (498)
+|+++.+...- ......+.+.|+..|+++.+... .++.+..... . . ....+........++|.||.
T Consensus 6 ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 6 SVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA----EAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLV 81 (307)
T ss_dssp EEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEEE
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc----hhhhhhcccccccccccccccccccccccccccCCCEEEE
Confidence 68888765421 12355788888888887654311 1111100000 0 0 00000000012356899999
Q ss_pred cCCCCCCCchhHHHHHHHHHHcCCCEEeehHH
Q 010866 369 PGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 369 pGG~g~~~~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
-||=|. ...+++.+...++|+|||=+|
T Consensus 82 ~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 82 LGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 987432 455667776778999999766
No 161
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=50.62 E-value=7.8 Score=36.03 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
+|-++||||- ||||+.++- .|++..|++|...-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 5889999986 788876553 3444489988876544
No 162
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=49.92 E-value=13 Score=38.39 Aligned_cols=31 Identities=42% Similarity=0.604 Sum_probs=27.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.|=|||- =|||-|++-|..+|++.||+|-.
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~ 83 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGV 83 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEE
Confidence 67888884 69999999999999999999965
No 163
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=49.79 E-value=21 Score=37.19 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
|.|-||| +=||+.|++=|+.+|++.|+++.. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 569999999999999999999853 4566654
No 164
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=49.66 E-value=18 Score=35.03 Aligned_cols=88 Identities=23% Similarity=0.172 Sum_probs=47.0
Q ss_pred EEEEEcccCC--ccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCC
Q 010866 299 RIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (498)
Q Consensus 299 ~IaIVgkY~~--l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~ 376 (498)
||+++.+... .......+.+.|+..|+++.+. ...++.+..... + .. .......++|.||.-||=|.
T Consensus 7 ki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~~---~-~~-~~~~~~~~~D~vi~~GGDGT-- 75 (292)
T 2an1_A 7 CIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKNV---P-TG-TLAEIGQQADLAVVVGGDGN-- 75 (292)
T ss_dssp EEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSSC---C-EE-CHHHHHHHCSEEEECSCHHH--
T ss_pred EEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhcccccc---c-cc-chhhcccCCCEEEEEcCcHH--
Confidence 6888865431 2224567889999999876542 000000000000 0 00 00012246899999998432
Q ss_pred chhHHHHHHHHHHcCCCEEeehHH
Q 010866 377 VQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 377 ~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
..++++.+.+.++|+|||=+|
T Consensus 76 ---~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 76 ---MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ---HHHHHHHHTTSSCEEEEBCSS
T ss_pred ---HHHHHHHhhcCCCCEEEEECC
Confidence 445666666678999999655
No 165
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=49.62 E-value=12 Score=34.92 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-++||||- +|||+ .+.+.|.++|++|.+.-.++
T Consensus 23 k~vlITGas-~gIG~-----~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGA-----EVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHH-----HHHHHHHHCCCEEEEEeCCc
Confidence 789999996 67776 45567778899998875443
No 166
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=49.41 E-value=11 Score=35.21 Aligned_cols=32 Identities=34% Similarity=0.441 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGAS-SGIGEAT-----ARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999985 7787754 4667778999877543
No 167
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=49.34 E-value=10 Score=34.91 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 7888754 5667788999877543
No 168
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=48.56 E-value=13 Score=31.86 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=18.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll 27 (498)
|+.|+++|+ ||-||...+.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 678999995 8889988777665544
No 169
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=48.07 E-value=11 Score=35.66 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|..+|++|.+.=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999996 8888754 4566678998877543
No 170
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=47.91 E-value=16 Score=37.77 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|-||| +=|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTG----TnGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGG----TNGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEC----CcCHHHHHHHHHHHHHHCCCCEEEE
Confidence 6788998 4799999999999999999998754
No 171
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=47.63 E-value=13 Score=35.32 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888754 466778899887753
No 172
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=47.22 E-value=20 Score=33.71 Aligned_cols=79 Identities=16% Similarity=0.251 Sum_probs=53.1
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCc
Q 010866 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (498)
Q Consensus 112 QviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e 191 (498)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+. +.+.+++. .| ...|||+.++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 578877665 3355543 345788888 777776643 45555544 34 48999999988663
Q ss_pred cccCCchhhHHHhhcCCCcccEEEEe
Q 010866 192 QKTKPTQHSVRGLRGQGLTPNILACR 217 (498)
Q Consensus 192 ~KtKptQhsvk~Lrs~GI~pd~lV~R 217 (498)
+-+.++.-|. .+..||+||--
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIsT 89 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIST 89 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEES
T ss_pred ----CcHHHHHHHH-hCCCCCEEEeC
Confidence 4566777665 48899998753
No 173
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=47.12 E-value=13 Score=34.82 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999996 777764 55667788999887643
No 174
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=47.05 E-value=16 Score=41.39 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~-----g~~v~~~K 38 (498)
|-|||+| .-|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~g-t~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIWS-ANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEEE-SSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEEE-CCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 5567764 679999999999999999999 99999999
No 175
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.72 E-value=12 Score=35.94 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- ||||+.+ .+.|-+.|.+|.+.-.|
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999994 8888854 56788899999886443
No 176
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=46.51 E-value=13 Score=35.29 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- ||||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999986 7787754 56677889999876443
No 177
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=46.45 E-value=16 Score=34.25 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8999765 456777899988753
No 178
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=46.22 E-value=11 Score=35.38 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.8
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 010866 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (498)
Q Consensus 13 ~lGkGi~~as~g~ll~~--~g~~v~~~K~Dp 41 (498)
|=|||-|+|++|.-|++ +|++|-++-|++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999998886 689999997777
No 179
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=46.05 E-value=69 Score=31.14 Aligned_cols=81 Identities=14% Similarity=0.017 Sum_probs=51.8
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCc
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~ 377 (498)
.+|.+|+.-. ....-..+.++|+..|+++.+. +++++.. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~~-~~~~a~~l~~aL~~~g~~V~~i------~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDTS-LETAAGYLAGLMTSWQWEFDYI------PSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESSC-TTTTHHHHHHHHHHTTCCCEEE------CTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCCC-chhHHHHHHHHHHhCCceEEEe------ccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 4678886321 2234467889999999888764 5555421 11 57899999999863221122
Q ss_pred hhHHHHHHHHHHcCCCEEee
Q 010866 378 QGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 378 ~g~i~~i~~a~e~~iPiLGI 397 (498)
....++++.+.+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 45677888888777666655
No 180
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=45.96 E-value=56 Score=31.43 Aligned_cols=88 Identities=13% Similarity=0.102 Sum_probs=52.1
Q ss_pred CeEEEEEcccCC--ccchHH---------HHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCE
Q 010866 297 PVRIAMVGKYTG--LSDAYL---------SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADG 365 (498)
Q Consensus 297 ~v~IaIVgkY~~--l~day~---------SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DG 365 (498)
++||.+.++|.- ...+-. -+.++|+..|+++.+. ..++.+.. .++ +.|+++|.
T Consensus 7 ~~~vlv~~~~~h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~~------t~dd~~~~---~~~-------~~L~~~Dv 70 (252)
T 1t0b_A 7 PIRVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAATA------VLDEPEHG---LTD-------EVLDRCDV 70 (252)
T ss_dssp CCEEEEEECCCHHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEEE------ESSSGGGG---CCH-------HHHHTCSE
T ss_pred CcEEEEECCccccccchhhhccCchHHHHHHHHHHhhCCcEEEEE------eccCcccc---CCH-------hHHhcCCE
Confidence 568888887751 001111 2377888888766543 22222110 111 56889999
Q ss_pred EEEcCC-CCCCCchhHHHHHHHHHHcCCCEEeehHH
Q 010866 366 ILVPGG-FGNRGVQGKILAAKYAREHRIPYLGICLG 400 (498)
Q Consensus 366 IilpGG-~g~~~~~g~i~~i~~a~e~~iPiLGIClG 400 (498)
||+-|. .+..-.....++++...+++.+++||=-|
T Consensus 71 vV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 71 LVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp EEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred EEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 998431 22222244567888888999999999655
No 181
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=45.90 E-value=15 Score=33.97 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 677764 456677889999876444
No 182
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=45.84 E-value=15 Score=34.38 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777764 45677788999987643
No 183
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=45.83 E-value=12 Score=35.31 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777654 4667788999887643
No 184
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=45.70 E-value=13 Score=34.14 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777654 46677789988765
No 185
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.68 E-value=12 Score=34.94 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+. +.+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456777889998874
No 186
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=45.62 E-value=13 Score=35.00 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777654 4667788999877543
No 187
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=45.61 E-value=13 Score=35.49 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7777654 46777889998874
No 188
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=45.56 E-value=15 Score=35.27 Aligned_cols=31 Identities=32% Similarity=0.527 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLA-----VARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTT-STHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999986 888875 4566778899988753
No 189
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=45.50 E-value=13 Score=35.43 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ||||+. +.+.|.++|++|.+.-
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEE
Confidence 789999995 777774 4567788899998764
No 190
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=45.18 E-value=13 Score=34.25 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+ .+.+.|.++|++|.+.-
T Consensus 6 k~vlITGas-~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEe
Confidence 789999985 77776 45567778899987654
No 191
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.11 E-value=15 Score=34.34 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 679999985 7777754 45677789998776433
No 192
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=44.99 E-value=30 Score=31.11 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEEeeeeee
Q 010866 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 186 (498)
Q Consensus 118 t~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs-------~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~ 186 (498)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-+++|.......++-.+-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4556677766321 3579999999985 45311 123334454433322234545555666654
No 193
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=44.89 E-value=12 Score=35.13 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|.++|++|.+.=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 777764 45667778998877643
No 194
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=44.68 E-value=16 Score=34.61 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 789999985 7777654 567778899998875443
No 195
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=44.64 E-value=23 Score=32.30 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
||-|+||||- ++||+-+ .+.|.++|++|.+.-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 6889999985 6666554 45666789999887543
No 196
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=44.57 E-value=56 Score=31.98 Aligned_cols=90 Identities=4% Similarity=-0.074 Sum_probs=52.2
Q ss_pred CCeEEEEEcccCCccc---hHHHHHHHHHHcC-CcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCC
Q 010866 296 EPVRIAMVGKYTGLSD---AYLSILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG 371 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~d---ay~SI~~AL~~aG-~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG 371 (498)
+++||.+++.-. ..+ +-..+.+.|+..| +++.+. . ++...+ +++.|. +.|.++|.||+.-
T Consensus 3 ~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~----~-d~~~~~------d~~~f~---~~L~~~D~vV~~~- 66 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFV----I-SPEQGK------DMSGFV---LDFSPYQLVVLDY- 66 (281)
T ss_dssp CCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEE----E-CCCTTS------CCTTCC---CCCTTCSEEEECC-
T ss_pred CceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEE----e-CCcccc------chhHHh---hhhhcCCEEEEeC-
Confidence 468898887544 222 2234566777677 555543 1 111110 011111 2578899999644
Q ss_pred CCCCCchhHHHHHHHHHHcCCCEEeehHHH
Q 010866 372 FGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (498)
Q Consensus 372 ~g~~~~~g~i~~i~~a~e~~iPiLGIClGm 401 (498)
.++.-.....+++....+++.+++|+.-+.
T Consensus 67 ~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 333322456677888888999999998653
No 197
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.49 E-value=14 Score=34.89 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999986 677764 556778889999886443
No 198
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=44.41 E-value=16 Score=34.05 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCc
Confidence 679999985 7777754 46677889999886544
No 199
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=44.26 E-value=13 Score=35.34 Aligned_cols=30 Identities=37% Similarity=0.627 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAVN 58 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 777765 456677889988653
No 200
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=44.16 E-value=14 Score=34.39 Aligned_cols=29 Identities=38% Similarity=0.646 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.++||||- +|||+. +.+.|.++|++|.+
T Consensus 14 k~vlITGas-~giG~~-----ia~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTS-----ICQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHH-----HHHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 889999995 777764 45667778988754
No 201
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=43.66 E-value=16 Score=33.57 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456777899887764
No 202
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=43.48 E-value=1e+02 Score=28.59 Aligned_cols=33 Identities=15% Similarity=0.111 Sum_probs=22.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+.. .......++.+.+.++|+.-+
T Consensus 56 ~~vdgiii~~~~----~~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 56 SGAKGFVICTPD----PKLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp TTCCEEEEECSC----GGGHHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCC----chhhHHHHHHHHHCCCcEEEe
Confidence 479999998631 122345577788889998644
No 203
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=43.35 E-value=99 Score=28.42 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=22.8
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 60 QKPDAIIEQLGNL----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HCCSEEEEESSCH----HHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCCh----hhhHHHHHHHHHCCCcEEEe
Confidence 5799999876421 22345677788889998765
No 204
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=43.06 E-value=15 Score=34.48 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 55677788999887543
No 205
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=43.02 E-value=18 Score=38.08 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.|-|||- =|||.|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888884 69999999999999999999853
No 206
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=42.99 E-value=16 Score=34.27 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLA-----IAEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999985 777765 4456777899887753
No 207
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=42.97 E-value=17 Score=35.00 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- ||||+. +.+.|-+.|.+|.+.-.|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999995 788865 567888999999886543
No 208
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=42.96 E-value=17 Score=33.79 Aligned_cols=32 Identities=25% Similarity=0.557 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRA-----IAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 689999984 677765 44567778999887543
No 209
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=42.85 E-value=15 Score=34.72 Aligned_cols=32 Identities=38% Similarity=0.533 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 22 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGI-----AQGLAEAGCSVVVASR 53 (267)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777654 4567778999877533
No 210
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=42.80 E-value=15 Score=34.42 Aligned_cols=32 Identities=34% Similarity=0.693 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGI-----SEKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEEC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 4556667998877533
No 211
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=42.74 E-value=25 Score=33.56 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~-v~~~K 38 (498)
++|.+.|. +|-||+..+.-|...|..+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 68999985 7899999999999999999999 54443
No 212
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=42.65 E-value=17 Score=34.35 Aligned_cols=31 Identities=39% Similarity=0.428 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 6 KVWLVTGAS-SGFGRA-----IAEAAVAAGDTVIGTA 36 (281)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999986 777765 4456778899987653
No 213
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=42.63 E-value=15 Score=35.07 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.-.+
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999996 7888754 45677889998776443
No 214
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=42.62 E-value=41 Score=30.03 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=45.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccC
Q 010866 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (498)
Q Consensus 3 ~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~d 63 (498)
-++++|- +|.||=..+..++..+...|++|..+..+.+.+.-...+.-+....|.+.||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888776654444444455566777776
No 215
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=42.53 E-value=15 Score=34.61 Aligned_cols=29 Identities=34% Similarity=0.558 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|-++||||- ||||+. +.+.|.++|++|.+
T Consensus 5 k~vlVTGas-~gIG~a-----ia~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKA-----AAIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777775 45677788998865
No 216
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=42.49 E-value=15 Score=34.65 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.++||||- +|||+. +.+.|-++|++|.+
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777764 55667788998755
No 217
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=42.46 E-value=32 Score=31.44 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=32.3
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcc-ccccCcchHHHHHHHh
Q 010866 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (498)
Q Consensus 111 vQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGdiEs~pf~ea~rq~ 166 (498)
..++|.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35788888999999999873 235898886 7887 56533333 555544
No 218
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=42.45 E-value=15 Score=34.25 Aligned_cols=31 Identities=42% Similarity=0.577 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 10 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGAS-RGIGKA-----IAELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4466778899987653
No 219
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=42.43 E-value=11 Score=34.58 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 78887655 5677889998876444
No 220
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=42.42 E-value=15 Score=34.65 Aligned_cols=29 Identities=41% Similarity=0.595 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.++||||- ||||+ ++.+.|-.+|++|.+
T Consensus 27 k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 789999984 77776 455677788998754
No 221
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=42.34 E-value=16 Score=35.15 Aligned_cols=71 Identities=20% Similarity=0.090 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCC------------CchhH
Q 010866 313 YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR------------GVQGK 380 (498)
Q Consensus 313 y~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~------------~~~g~ 380 (498)
...+.++|+..++++.+. ++.+..+ ..| ...+.|.++|.||+.+-+... .....
T Consensus 42 ~~~l~~aL~~~~~~v~~~------~~~~~~~----~fp----~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~ 107 (256)
T 2gk3_A 42 ATWLLECLRKGGVDIDYM------PAHTVQI----AFP----ESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNA 107 (256)
T ss_dssp CHHHHHHHHHTTCEEEEE------CHHHHHH----CCC----CSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCH
T ss_pred HHHHHHHHHhcCceEEEE------ecccchh----hCC----cChhHHhcCCEEEEeCCchhhcccccccccccccChHH
Confidence 356888999877655442 2210000 000 011568899999999843211 01456
Q ss_pred HHHHHHHHHcCCCEEee
Q 010866 381 ILAAKYAREHRIPYLGI 397 (498)
Q Consensus 381 i~~i~~a~e~~iPiLGI 397 (498)
.++++...+++..+++|
T Consensus 108 ~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 108 LESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCEEEEE
Confidence 78899988899999999
No 222
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.29 E-value=19 Score=35.29 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- ||||+.+ .+.|-++|++|.+.=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4567778999877543
No 223
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=42.10 E-value=14 Score=34.57 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999986 777765 455677789998774
No 224
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=42.05 E-value=15 Score=34.05 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAI-----AIDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7888765 45677789988664
No 225
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=42.03 E-value=20 Score=33.35 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=24.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|+||||- -+|||+.+ .+.|.++|++|.+.
T Consensus 15 k~vlITGa~~~~giG~~i-----a~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGI-----AKACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHH-----HHHHHHcCCCEEEE
Confidence 789999995 37899865 45677789988765
No 226
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=42.00 E-value=16 Score=34.36 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|-.+|++|.+.=
T Consensus 30 k~vlITGas-~gIG~~l-----a~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAI-----ARKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEE
Confidence 789999985 7888765 456667899887653
No 227
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=41.97 E-value=18 Score=34.18 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777765 45667788999887643
No 228
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=41.95 E-value=16 Score=34.07 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 13 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGRE-----AAMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899987753
No 229
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.84 E-value=16 Score=34.69 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|..+|++|.+.-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777754 4667778999877643
No 230
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.78 E-value=15 Score=34.55 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.++ +.|.++|++|.+.
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 77777554 5566789988764
No 231
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=41.75 E-value=26 Score=32.21 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~--~g~~v~~~K 38 (498)
|.+|+||- .|+|.|++.++++... +|++|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 4677788888887665 999999998
No 232
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=41.51 E-value=17 Score=34.21 Aligned_cols=31 Identities=42% Similarity=0.702 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 14 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRAT-----AVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 8888765 456677899887753
No 233
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=41.50 E-value=17 Score=33.66 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+ ++.+.|.++|++|.+.-
T Consensus 10 k~vlITGas-~giG~-----~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQ-----AYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEc
Confidence 789999984 77776 45567778899988753
No 234
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.49 E-value=16 Score=34.53 Aligned_cols=32 Identities=34% Similarity=0.664 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 11 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRG-----IATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777775 45667788998877643
No 235
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=41.48 E-value=1.1e+02 Score=30.10 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYl 43 (498)
+.|.++| -.|-||=.....|...+...|.+|.++-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999888864
No 236
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=41.47 E-value=19 Score=34.16 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999985 777764 45667788999887643
No 237
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=41.46 E-value=17 Score=34.69 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.+ .+.|-.+|++|.+.
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7787654 46677889998875
No 238
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=41.41 E-value=17 Score=34.50 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEec
Confidence 789999985 7777654 5667788999987643
No 239
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=41.39 E-value=19 Score=33.33 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 13 k~vlVTGas-ggiG~~-----~a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLA-----TAERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999994 777765 44567778999887643
No 240
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=41.29 E-value=17 Score=33.41 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 677764 4566777899888763
No 241
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=41.26 E-value=16 Score=35.10 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- ||||+.+ .+.|-++|++|.+.-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7777754 456677899887753
No 242
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=41.23 E-value=17 Score=33.97 Aligned_cols=32 Identities=34% Similarity=0.406 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4566778998877643
No 243
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=41.08 E-value=22 Score=33.93 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5677789998876443
No 244
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=41.05 E-value=23 Score=31.87 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|| |+||||- +++| +.+.+.|.++|++|..+-.+|
T Consensus 1 M~-ilItGat-G~iG-----~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVG-----KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHH-----HHHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHH-----HHHHHHHHHCCCEEEEEECCc
Confidence 55 8999975 4555 455667778899999887665
No 245
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=40.96 E-value=18 Score=33.49 Aligned_cols=30 Identities=37% Similarity=0.589 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-|+||||- ++||+. +.+.|.++|++|.+.
T Consensus 15 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLA-----FTRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCeEEEE
Confidence 789999984 777764 455677789888765
No 246
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=40.93 E-value=16 Score=35.12 Aligned_cols=31 Identities=35% Similarity=0.363 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 10 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRS-----IAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCeEEEEc
Confidence 789999985 788775 4566778899988763
No 247
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.93 E-value=17 Score=34.44 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 11 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRS-----HAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEeCC
Confidence 789999986 777765 456777889999876544
No 248
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.88 E-value=16 Score=34.42 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRAT-----AVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 4567778999887643
No 249
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=40.83 E-value=28 Score=32.49 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~-~v~~ 36 (498)
+||.+.|. +|-||+..+..|...|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 68999985 799999999999999999998 5543
No 250
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=40.74 E-value=21 Score=33.29 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||-=||||+. +.+.|-.+|++|.+.-.
T Consensus 23 k~vlITGasg~GIG~~-----~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGST-----TARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHH-----HHHHHHHCCCEEEEecC
Confidence 7899999976788875 45667788999887644
No 251
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=40.71 E-value=17 Score=34.70 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4567778899988753
No 252
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=40.65 E-value=17 Score=34.48 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- ||||+. +.+.|-.+|++|.+.-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 677764 556778889999887544
No 253
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=40.59 E-value=17 Score=33.29 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.|+||||- ++||+. +.+.|.++|++|.+
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 677764 45667778998876
No 254
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.54 E-value=17 Score=35.10 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 32 k~vlVTGas-~gIG~~-----la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLA-----TATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999997 777775 456677889988775
No 255
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=40.48 E-value=19 Score=34.32 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999996 778765 456677889998775
No 256
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=40.44 E-value=18 Score=34.52 Aligned_cols=33 Identities=33% Similarity=0.355 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 17 k~vlVTGas-~gIG~~-----~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAV-----TARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEECC
Confidence 679999997 777764 446677889998876443
No 257
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=40.41 E-value=17 Score=33.57 Aligned_cols=30 Identities=33% Similarity=0.455 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEE
Confidence 789999996 7777654 45677789888653
No 258
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=40.40 E-value=17 Score=34.97 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|.++||||- ||||+. +.+.|-++|++|.+.-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 777764 5567778899998865443
No 259
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=40.38 E-value=18 Score=34.19 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 14 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRA-----HAVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCeEEEEec
Confidence 789999985 777765 45667788999987643
No 260
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=40.33 E-value=1.1e+02 Score=28.47 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=22.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+.... .....++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~~----~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 60 KNPAGIAISAIDPV----ELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HCCSEEEECCSSTT----TTHHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEcCCCHH----HHHHHHHHHHHCCCcEEEE
Confidence 47999999764321 1234567777889998754
No 261
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=40.22 E-value=17 Score=33.95 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 7777654 466777899887753
No 262
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.20 E-value=15 Score=34.74 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777764 456677789998876443
No 263
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=40.07 E-value=19 Score=33.92 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAG-----LVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 777764 455677889999886543
No 264
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.88 E-value=1.1e+02 Score=28.07 Aligned_cols=33 Identities=21% Similarity=0.084 Sum_probs=22.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
..+||||+.+...+ .....++.+.+.++|+.-+
T Consensus 63 ~~vdgiI~~~~~~~----~~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 63 LKVDAIFITTLDDV----YIGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TTCSEEEEECSCTT----TTHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH----HHHHHHHHHHHcCCCEEEe
Confidence 47999999764221 1235567777889998765
No 265
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=39.73 E-value=76 Score=30.41 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=42.7
Q ss_pred CCCeEEEEEcccCCcc---chHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEc
Q 010866 295 HEPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (498)
Q Consensus 295 ~~~v~IaIVgkY~~l~---day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilp 369 (498)
.+.+||||+ .+.+++ +++..+.++|+..|+.....+++.+-+++ .+++......+.+ .++|.|+..
T Consensus 6 ~~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~--------gd~~~~~~~~~~l~~~~~DlIiai 76 (302)
T 3lkv_A 6 AKTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ--------GNPAIAVQIARQFVGENPDVLVGI 76 (302)
T ss_dssp -CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECT--------TCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCC--------CCHHHHHHHHHHHHhcCCcEEEEc
Confidence 357899999 487654 34567889999999876655566665554 2343333333333 468987754
Q ss_pred C
Q 010866 370 G 370 (498)
Q Consensus 370 G 370 (498)
+
T Consensus 77 ~ 77 (302)
T 3lkv_A 77 A 77 (302)
T ss_dssp S
T ss_pred C
Confidence 3
No 266
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=39.62 E-value=18 Score=34.41 Aligned_cols=30 Identities=37% Similarity=0.491 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAA-----IAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777765 456677789988654
No 267
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=39.55 E-value=19 Score=33.62 Aligned_cols=31 Identities=39% Similarity=0.530 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKA-----IALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566777899887753
No 268
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=39.51 E-value=19 Score=33.70 Aligned_cols=31 Identities=32% Similarity=0.555 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 13 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAA-----IARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 677765 4456777899988753
No 269
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=39.38 E-value=19 Score=33.59 Aligned_cols=30 Identities=40% Similarity=0.598 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~-----ia~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLG-----IAQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 779999985 777765 445677789988764
No 270
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=39.16 E-value=33 Score=31.80 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.7
Q ss_pred CccEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEEeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEec
Q 010866 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (498)
Q Consensus 139 ~~dv~i~EiGGTvGdiEs~pf~ea~rq~~~~~g~~n~~~ih~t~vp~~~~~~e~KtKptQhsvk~Lrs~GI~pd~lV~Rs 218 (498)
++|++++|+||. + -+.. |.+.++..+++...++.+|.+-- ++.. ...|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~-~~a~~~~~~~~~k~vi~~H~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGP-KEAKEVADLLNAKVIIPMHYKTK-YLKF----NLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCH-HHHHHHHHHTTCSEEEEESCCCS-SCCT----TCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCH-HHHHHHHHhcCCCEEEEEecccc-cccC----CchhHHHHHHHHHhcCCCccceEEec
Confidence 589999999875 1 2333 33344555677888999998763 3321 25678888888888888777677665
Q ss_pred C
Q 010866 219 T 219 (498)
Q Consensus 219 ~ 219 (498)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 271
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=39.12 E-value=18 Score=34.46 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAI-----ALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7777654 46677889988765
No 272
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=39.08 E-value=96 Score=28.90 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=22.3
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~vdgiii~~~~~----~~~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 60 TYPSGIATTIPSD----TAFSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp TCCSEEEECCCCS----STTHHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCH----HHHHHHHHHHHHCCCCEEEE
Confidence 5799999976322 11244567777889999755
No 273
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=39.01 E-value=19 Score=33.61 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFA-----SALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 777764 4456777899887753
No 274
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=38.85 E-value=19 Score=34.07 Aligned_cols=32 Identities=41% Similarity=0.547 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 10 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAG-----IVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 689999985 677765 45667788999887643
No 275
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=38.68 E-value=21 Score=34.23 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 45667788999877533
No 276
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=38.46 E-value=1.3e+02 Score=28.28 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=22.8
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+... ......++.+.+.++|+.-+
T Consensus 58 ~~vdgiIi~~~~~----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 58 KGVKVLVIASIDG----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HTCSEEEECCSSG----GGGHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEEcCCc----hhHHHHHHHHHHCCCCEEEE
Confidence 4799999976321 22345677788889998755
No 277
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=38.38 E-value=18 Score=34.47 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999986 78887654 556678998877543
No 278
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=38.32 E-value=20 Score=33.52 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777765 4566778899988753
No 279
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=38.27 E-value=19 Score=34.14 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+-+ .+.|.++|++|.+.-.
T Consensus 29 k~vlITGas-ggIG~~l-----a~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREM-----AYHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 679999985 7777754 4566778999887643
No 280
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=38.19 E-value=24 Score=34.15 Aligned_cols=33 Identities=33% Similarity=0.404 Sum_probs=26.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- -||||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAI-----CKLLRAAGARVLVGTW 43 (319)
T ss_dssp CEEEEECCCCTTSHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCCCcHHHHH-----HHHHHHCCCEEEEEec
Confidence 689999995 89999865 4567778999987643
No 281
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=38.05 E-value=20 Score=33.97 Aligned_cols=33 Identities=42% Similarity=0.614 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456677889998776433
No 282
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.05 E-value=21 Score=33.23 Aligned_cols=32 Identities=34% Similarity=0.541 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 6 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRAT-----LELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777765 4567778999887643
No 283
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=38.04 E-value=20 Score=34.17 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7777654 45677889988654
No 284
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=37.90 E-value=52 Score=28.22 Aligned_cols=74 Identities=9% Similarity=0.131 Sum_probs=39.3
Q ss_pred hHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcccccc----CcchHHH
Q 010866 91 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 161 (498)
Q Consensus 91 G~iy~~vi~kER~g~ylG~tvQvi-----PHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdi----Es~pf~e 161 (498)
++-|...+.+.=... |..++|+ =.-|....+++..... ..+||+|+|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 355666665542222 4455554 1234455556655431 2378999999995 443 2234555
Q ss_pred HHHHhhhhcCCCC
Q 010866 162 ALGQFSYRVGPGN 174 (498)
Q Consensus 162 a~rq~~~~~g~~n 174 (498)
.+++|-..+...+
T Consensus 91 ~~~~~i~~~~~~~ 103 (185)
T 3hp4_A 91 NLTALVKKSQAAN 103 (185)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 5555554443333
No 285
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.87 E-value=21 Score=34.18 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||- ||||+. +.+.|.++|++|.+.=.+
T Consensus 10 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLA-----IAKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEECC
Confidence 789999986 778775 456677889988776443
No 286
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.60 E-value=21 Score=32.43 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g--~~v~~~K~D 40 (498)
|.++||||- ++||+.+ .+.|.++| ++|.+.-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7777654 45666788 888876544
No 287
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=37.56 E-value=21 Score=34.20 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ||||+.+ .+.|.++|++|.+.-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 6777654 566778899887653
No 288
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=37.50 E-value=21 Score=34.57 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 689999995 7777754 46677889998876443
No 289
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.49 E-value=79 Score=29.70 Aligned_cols=82 Identities=16% Similarity=0.082 Sum_probs=43.2
Q ss_pred eEEEEEcccCC---ccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCC
Q 010866 298 VRIAMVGKYTG---LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (498)
Q Consensus 298 v~IaIVgkY~~---l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~ 372 (498)
.+||++-.... .......+.++++..|+.+.+. .+.. +++......+.+ .++||||+.+..
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~------~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ------SANG--------NEETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEE------ECTT--------CHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEE------CCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 47888753321 1123345666777777655442 3321 111111122222 579999998743
Q ss_pred CCCCchhHHHHHHHHHHcCCCEEee
Q 010866 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 373 g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.+ . ....++.+.+.++|+.-+
T Consensus 69 ~~-~---~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 69 GQ-V---LSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TT-S---CHHHHHHHHTTTCEEEEE
T ss_pred hh-h---hHHHHHHHHHCCCeEEEE
Confidence 21 1 234667777889998654
No 290
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=37.49 E-value=33 Score=32.38 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=23.9
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 4 i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|+||||- |-+.+.|.+.|.++|++|..+-.+
T Consensus 3 vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 3 IVVTGGA------GFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECCC------ChHHHHHHHHHHhCCCEEEEEeCC
Confidence 8999974 556667778888899999887443
No 291
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=37.44 E-value=33 Score=30.26 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v 34 (498)
++|+++|. +|-||+..+..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 68999996 78899999999988887666 44
No 292
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=37.41 E-value=20 Score=33.87 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|-++||||- ||||+.+ .+.|.++|++|.+
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777654 5667788998876
No 293
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=37.30 E-value=21 Score=33.53 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 677764 456677889988654
No 294
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.28 E-value=20 Score=33.30 Aligned_cols=29 Identities=38% Similarity=0.604 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|-++||||- +|||+. +.+.|-++|++|.+
T Consensus 5 k~~lVTGas-~gIG~~-----ia~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRS-----IALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777765 45667788998765
No 295
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=37.24 E-value=29 Score=32.60 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- -+|||+.+ .+.|.++|++|.+.=
T Consensus 8 k~vlVTGa~~s~gIG~ai-----a~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHI-----ARVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHHH-----HHHHHHCCCEEEEEe
Confidence 689999994 78999865 456778899887753
No 296
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=37.14 E-value=21 Score=34.09 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+. +.+.|-++|++|.+.
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVLN 55 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456677889988763
No 297
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.05 E-value=21 Score=33.30 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAST-DGIGLA-----IARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999984 677765 4566777899887753
No 298
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=36.99 E-value=11 Score=36.61 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=24.1
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHc--CCCEEeehHHH
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 401 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~--~iPiLGIClGm 401 (498)
++|.||.-||=|. ...+++.+... ++|+|||=+|.
T Consensus 35 ~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 5699999997331 34455655554 89999997663
No 299
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=36.84 E-value=35 Score=30.61 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
||-|+||||- |-+.+.+.+.|.++|++|..+--+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4569999975 7777888889999999998875543
No 300
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=36.79 E-value=20 Score=34.46 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- ||||+. +.+.|-+.|.+|.+.-
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999984 788875 4577889999997753
No 301
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.77 E-value=17 Score=34.39 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7777654 56677889988764
No 302
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=36.74 E-value=21 Score=33.30 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7777654 56677789988765
No 303
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.74 E-value=22 Score=34.36 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- ||||+.+ .+.|-+.|.+|.+.-.
T Consensus 8 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAI-----AKKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEEEC
Confidence 789999984 7888765 4667789999887544
No 304
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=36.67 E-value=22 Score=34.82 Aligned_cols=61 Identities=28% Similarity=0.445 Sum_probs=43.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--eccccc-CCCCCCCccccceEEEccCCccccCCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLN-TDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~-~v~~~K--~DpYlN-vd~gtmsP~~HgEvfV~~dG~E~DlDl 71 (498)
+.|+.|.| |+.|+....+|+..|| +|..++ +.-|.. +++. .+.-.|++||=|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~--~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES--ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT--TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc--cccccCcceeEcCccccccCH
Confidence 45666653 6778888999999999 587765 444543 2332 345579999999987777766
No 305
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=36.51 E-value=22 Score=30.63 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll 27 (498)
|+.|++|| .+|-||...|.-|...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987776666544
No 306
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=36.44 E-value=23 Score=33.54 Aligned_cols=32 Identities=34% Similarity=0.421 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777654 4567778998877533
No 307
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=36.42 E-value=42 Score=33.40 Aligned_cols=41 Identities=32% Similarity=0.515 Sum_probs=33.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
..|.+||- .|.||=..+..++..|..+|++|.++-.||.-.
T Consensus 80 ~~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~ 120 (355)
T 3p32_A 80 HRVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSST 120 (355)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC----
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCC
Confidence 35777874 999999999999999999999999999998655
No 308
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=36.32 E-value=22 Score=33.27 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 466778899987753
No 309
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=36.26 E-value=20 Score=34.07 Aligned_cols=30 Identities=40% Similarity=0.629 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 456777889999875
No 310
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=36.19 E-value=25 Score=33.85 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+.+ .+.|-+.|.+|.+.
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8888765 46677889888664
No 311
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=36.13 E-value=64 Score=28.76 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=33.6
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcc-ccccCcchHHHHHHHh
Q 010866 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (498)
Q Consensus 111 vQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGdiEs~pf~ea~rq~ 166 (498)
..+||.=-++|++.|++..+ ..++|++|+ .||| +|+--=.| ||++++
T Consensus 49 ~~iv~Dd~~~i~~~l~~~~~------~~~~DlVit-tGG~g~g~~D~t~--~a~~~~ 96 (167)
T 1uuy_A 49 TAVVPDEVERIKDILQKWSD------VDEMDLILT-LGGTGFTPRDVTP--EATKKV 96 (167)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCCchH--HHHHHH
Confidence 35778878899999998862 236798766 6887 66544444 888876
No 312
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=36.03 E-value=18 Score=35.01 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+. +.+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 788775 467788899988764
No 313
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.03 E-value=28 Score=32.72 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999994 7888754 456778899987753
No 314
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=35.97 E-value=19 Score=35.36 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 10 k~~lVTGas-~GIG~~~-----a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAY-----ALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7888765 46677889998774
No 315
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=35.92 E-value=30 Score=33.23 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 11 ~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
-.|.||=.++.++|..|.++|++|-++-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 316
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.88 E-value=24 Score=34.11 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- ||||+.+ .+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8888865 47788999999775
No 317
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=35.88 E-value=30 Score=32.73 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~----g~~v~~~K 38 (498)
+||.+.| .+|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 6899998 58999999999999999998 99986543
No 318
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=35.77 E-value=21 Score=34.81 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEC
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7888754 456777899988763
No 319
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=35.75 E-value=20 Score=33.82 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.++||||- +|||+.+ .+.|-.+|++|.+
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888754 4667788998865
No 320
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=35.74 E-value=25 Score=32.54 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~-v~~~K 38 (498)
|-++|||| -+|||+.+ .+.|.++|++ |.+.-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 47787654 4567778986 76653
No 321
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=35.71 E-value=40 Score=35.32 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 322
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=35.65 E-value=23 Score=33.13 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLA-----TALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999984 777765 45667788999877643
No 323
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=35.46 E-value=21 Score=33.86 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRI-----AEIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999995 7777654 45667789988775
No 324
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=35.35 E-value=2.2e+02 Score=24.72 Aligned_cols=95 Identities=11% Similarity=0.049 Sum_probs=51.6
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhcc
Q 010866 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK 361 (498)
Q Consensus 282 ~~W~~lv~~v~~~~~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~ 361 (498)
..+.++++.+.+. -+|-++| .|...-.-......|.+.|..+... +.. +..+......+.
T Consensus 27 ~~l~~~~~~i~~a---~~I~i~G-~G~S~~~a~~~~~~l~~~g~~~~~~------~~~----------~~~~~~~~~~~~ 86 (187)
T 3sho_A 27 EAIEAAVEAICRA---DHVIVVG-MGFSAAVAVFLGHGLNSLGIRTTVL------TEG----------GSTLTITLANLR 86 (187)
T ss_dssp HHHHHHHHHHHHC---SEEEEEC-CGGGHHHHHHHHHHHHHTTCCEEEE------CCC----------THHHHHHHHTCC
T ss_pred HHHHHHHHHHHhC---CEEEEEe-cCchHHHHHHHHHHHHhcCCCEEEe------cCC----------chhHHHHHhcCC
Confidence 3455666666543 2799988 5522111123455666677665543 211 001111112333
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.=|.+|+---.|. ....+++++.|++++.|+.+|+
T Consensus 87 ~~d~~i~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT 121 (187)
T 3sho_A 87 PTDLMIGVSVWRY--LRDTVAALAGAAERGVPTMALT 121 (187)
T ss_dssp TTEEEEEECCSSC--CHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCC--CHHHHHHHHHHHHCCCCEEEEe
Confidence 4455554333332 3457888999999999999997
No 325
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=35.24 E-value=26 Score=33.87 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- -||||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAI-----AKHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 89999865 4567788999988643
No 326
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=35.19 E-value=1.7e+02 Score=26.78 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=21.9
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+... ...++.+.+.++|+.-+.
T Consensus 62 ~~vdgiIi~~~~~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 62 RGFDGLILQSFSN-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp TTCSEEEEESSCC-------HHHHHHHHTTSSCEEEES
T ss_pred CCCCEEEEecCCc-------HHHHHHHHHCCCCEEEEe
Confidence 4799999987432 345666777889987553
No 327
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=35.18 E-value=19 Score=34.33 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+. +.+.|.++|++|.+.
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 677764 456677889988774
No 328
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.18 E-value=22 Score=34.30 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 27 k~vlVTGa-s~gIG~ai-----a~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSA-----AVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777754 4667778999887643
No 329
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=35.13 E-value=40 Score=31.88 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~-~g~~v~~ 36 (498)
++|+++|. +|-||...+..|...|.. +|++|..
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeE
Confidence 68999985 799999999999999999 9998876
No 330
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=35.09 E-value=24 Score=34.01 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 35 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~~ 65 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAI-----ASAYAKAGATIVFND 65 (291)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 455677899887753
No 331
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=34.92 E-value=33 Score=32.54 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=25.8
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|.++||||-- ||||+.+ .+.|.++|++|.+.=.+
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeCc
Confidence 7899999854 7898765 45677889998876443
No 332
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=34.89 E-value=23 Score=32.70 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|+||||- ++||+. +.+.|.++|++|.+.
T Consensus 8 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKS-----MAIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777764 455667789988764
No 333
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=34.88 E-value=1.4e+02 Score=28.35 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=49.7
Q ss_pred eEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCc
Q 010866 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (498)
Q Consensus 298 v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~ 377 (498)
-+|.+|+- -..+...|.++-+.+|+.... =+|++- .++.-.. .....+|.|++.. +
T Consensus 69 ~~iLfVgT---k~~~~~~V~~~A~~~g~~~v~---~rwlgG-~LTN~~~-----------~~f~~PdlliV~D-p----- 124 (208)
T 1vi6_A 69 SKILLVAA---RQYAHKPVQMFSKVVGSDYIV---GRFIPG-TLTNPML-----------SEYREPEVVFVND-P----- 124 (208)
T ss_dssp GGEEEEEC---SGGGHHHHHHHHHHHCCEEEE---SSCCTT-TTTCTTS-----------TTCCCCSEEEESC-T-----
T ss_pred CEEEEEeC---CHHHHHHHHHHHHHhCCeeec---CEECCC-cccChhh-----------HhhCCCCEEEEEC-C-----
Confidence 36888872 122556777777778875443 367653 3332111 2345789998875 2
Q ss_pred hhHHHHHHHHHHcCCCEEeeh
Q 010866 378 QGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 378 ~g~i~~i~~a~e~~iPiLGIC 398 (498)
.....++++|...++|+.|+|
T Consensus 125 ~~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 125 AIDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp TTTHHHHHHHHHTTCCEEEEE
T ss_pred CcchhHHHHHHHhCCCEEEEe
Confidence 234578999999999999999
No 334
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=34.80 E-value=36 Score=30.64 Aligned_cols=45 Identities=24% Similarity=0.368 Sum_probs=32.9
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcc-ccccCcchHHHHHHHh
Q 010866 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (498)
Q Consensus 111 vQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGdiEs~pf~ea~rq~ 166 (498)
..++|-= ++|++.+++.. ..++|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~-------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAI-------DDDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4578888 88999998875 135898887 7887 66655455 788776
No 335
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=34.80 E-value=52 Score=28.64 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~ 35 (498)
++|.+||. +|-||=..+..|...|+..|+.+.
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i 37 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCY 37 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEE
Confidence 58899996 888998888888887777787654
No 336
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=34.78 E-value=91 Score=28.65 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=19.7
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.+||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 57 ~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 57 MVDGAIILDWTFP---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp TCSEEEEECTTSC---H---HHHHHHHHTTCEEEES
T ss_pred cccEEEEecCCCC---H---HHHHHHHhcCCCEEEE
Confidence 8999999764221 1 3455666678898755
No 337
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=34.76 E-value=23 Score=32.92 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+|||| -+|||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 67999998 46777654 45666789988776443
No 338
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=34.66 E-value=19 Score=34.25 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.|+||||- +|||+.++ +.|.++|++|.+.-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 77877554 56667899887743
No 339
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=34.62 E-value=25 Score=33.49 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.|+||||- +|||+. +.+.|.++|++|.+.=
T Consensus 19 k~vlVTGas-ggIG~~-----la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKA-----IVKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999984 777764 4456777899887753
No 340
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=34.54 E-value=26 Score=32.55 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+ ++.+.|-++|++|.+.=.
T Consensus 10 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEEEcC
Confidence 789999996 77775 455677788999887643
No 341
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=34.49 E-value=23 Score=33.75 Aligned_cols=30 Identities=40% Similarity=0.535 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+. +.+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQM-----IAQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEE
Confidence 789999984 777765 445677789988765
No 342
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.47 E-value=21 Score=32.70 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-|+||||- ++||+.+ .+.|.++|++|.+.-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 6777654 456677899887753
No 343
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=34.43 E-value=22 Score=33.19 Aligned_cols=30 Identities=43% Similarity=0.564 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~giG~~-----ia~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLE-----VVKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999984 677765 445677789998775
No 344
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=34.27 E-value=22 Score=33.77 Aligned_cols=29 Identities=34% Similarity=0.547 Sum_probs=21.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
|.++||||- ||||+. +.+.|-++|++|.+
T Consensus 28 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAA-----IAARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHH-----HHHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEE
Confidence 679999984 677764 44566677998865
No 345
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=34.25 E-value=24 Score=34.43 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|-++|++|.++-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777764 4566778899998763
No 346
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=34.22 E-value=70 Score=31.12 Aligned_cols=25 Identities=16% Similarity=0.227 Sum_probs=16.4
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHcC
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHAS 324 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~aG 324 (498)
+++|||||| .|..+ ....++|...+
T Consensus 4 ~~~rigiiG-~G~ig---~~~~~~l~~~~ 28 (329)
T 3evn_A 4 SKVRYGVVS-TAKVA---PRFIEGVRLAG 28 (329)
T ss_dssp -CEEEEEEB-CCTTH---HHHHHHHHHHC
T ss_pred CceEEEEEe-chHHH---HHHHHHHHhCC
Confidence 358999999 77554 34566776553
No 347
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=34.20 E-value=26 Score=33.21 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREM-----AMELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777754 45677789988764
No 348
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=34.18 E-value=28 Score=32.67 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++|||| -+|||+.+ .+.|.++|++|.+.-
T Consensus 35 k~vlITGa-sggIG~~l-----a~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAV-----AEAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHH-----HHHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEe
Confidence 67999998 47888754 445666799887753
No 349
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=34.11 E-value=24 Score=32.98 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 677754 4567778899987753
No 350
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=34.11 E-value=26 Score=33.40 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456677899887653
No 351
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=34.00 E-value=24 Score=33.29 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999995 7777654 4667788998877644
No 352
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=33.93 E-value=23 Score=34.77 Aligned_cols=31 Identities=35% Similarity=0.363 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRS-----IAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 689999986 777775 4566778899988764
No 353
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=33.91 E-value=26 Score=32.56 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g---~~v~~~K~D 40 (498)
+|.++||||- ++||+. +.+.|.++| ++|.+.-.+
T Consensus 21 ~k~vlITGas-ggIG~~-----la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLG-----LVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHH-----HHHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHH-----HHHHHHhcCCCCcEEEEEecC
Confidence 4789999984 777764 455677788 888776443
No 354
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=33.89 E-value=33 Score=32.38 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=24.7
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||-- +|||+.+ .+.|..+|++|.+.-
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTY 39 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEe
Confidence 7899999963 8899764 456777899987753
No 355
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=33.84 E-value=25 Score=33.35 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGAT-GGIGEA-----IARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4567778899887653
No 356
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=33.80 E-value=35 Score=32.57 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
||-|+||||- |-+.+.|.+.|.++|++|..+
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 444556666777789988775
No 357
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=33.72 E-value=27 Score=34.35 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+ ++.+.|-++|++|...
T Consensus 6 k~vlVTGas-~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEe
Confidence 689999985 77776 4556677889988654
No 358
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.63 E-value=27 Score=32.56 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.|+||||- +|||+- +.+.|.++|++|.+.-
T Consensus 17 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGA-GGIGET-----TAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999984 677764 4556777899988753
No 359
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=33.46 E-value=36 Score=32.30 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||-- +|||+.++ +.|.++|++|.+.-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 78998654 56667899887753
No 360
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=33.21 E-value=32 Score=32.33 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456777889999876443
No 361
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=33.21 E-value=27 Score=32.94 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 7 k~vlITGas-~gIG~ai-----a~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAA-----LDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999984 7777754 456777899988753
No 362
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=33.15 E-value=34 Score=31.09 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
+|.|+||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 ~k~vlITGas-ggiG~~~-----a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAI-----ALRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 5889999994 7777754 45667789887764
No 363
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=33.07 E-value=25 Score=31.10 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~ 36 (498)
++|+++|+ +|-||...+.-|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 68999997 7889987776665544 2666543
No 364
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=33.01 E-value=44 Score=33.38 Aligned_cols=50 Identities=28% Similarity=0.410 Sum_probs=37.6
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc--------------cccCCC--CCCCccccc
Q 010866 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP--------------YLNTDA--GTMSPFEHG 56 (498)
Q Consensus 3 ~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp--------------YlNvd~--gtmsP~~Hg 56 (498)
.++|+| -||-||-..+..+-..+..+|.+|.+ +|| |+++++ +.+||++..
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~gg~~~~~~~~~~~~NPf~~~ 102 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDPEREYKEMCRKLGGVWINCTGGEGKINPLQVR 102 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EESSCCSHHHHHHTTCEEEETTSGGGCCCTTSCC
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeCCcCHHHHHHHcCCEEEEECCCCCeecceecc
Confidence 467777 58999999999998888889988877 576 455554 366777653
No 365
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=32.86 E-value=1.2e+02 Score=28.14 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=19.9
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 65 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 65 GSADGVIISKIEPND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TCCSEEEEESCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCccEEEEecCCCCc------HHHHHHhhCCCCEEEE
Confidence 579999998632211 3455666678887654
No 366
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.84 E-value=38 Score=31.68 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=24.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||-- +|||+.+ .+.|.++|++|.+.-
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTY 42 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEc
Confidence 6799999964 7898755 456777899987753
No 367
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.54 E-value=26 Score=33.15 Aligned_cols=32 Identities=31% Similarity=0.522 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 6777754 4567778998877533
No 368
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=32.51 E-value=2e+02 Score=26.27 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=23.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+.... ........++.+.+.++|+.-+.
T Consensus 70 ~~vdgiIi~~~~~~-~~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSA-LQTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTT-SCCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeccccc-ccCCcHHHHHHHHhcCCCEEEEe
Confidence 57999999874321 11122355667777899987553
No 369
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=32.39 E-value=28 Score=33.21 Aligned_cols=30 Identities=37% Similarity=0.626 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 30 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLG-----IARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHH-----HHHHHHHCCCeEEEE
Confidence 679999984 677765 456677789987664
No 370
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=32.36 E-value=38 Score=31.64 Aligned_cols=24 Identities=33% Similarity=0.439 Sum_probs=17.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll 27 (498)
..|.|||+ ||-||...|.-|...|
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLL 46 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHh
Confidence 56899997 5668987776655544
No 371
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=32.34 E-value=44 Score=30.39 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
+|.++||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 5889999985 777764 45667788999877543
No 372
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=32.31 E-value=35 Score=30.00 Aligned_cols=25 Identities=32% Similarity=0.587 Sum_probs=17.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~ 32 (498)
+.|++||+ +|-||. +++++|..+|+
T Consensus 9 ~~I~i~G~--~GsGKS----T~~~~La~~g~ 33 (203)
T 1uf9_A 9 IIIGITGN--IGSGKS----TVAALLRSWGY 33 (203)
T ss_dssp EEEEEEEC--TTSCHH----HHHHHHHHTTC
T ss_pred eEEEEECC--CCCCHH----HHHHHHHHCCC
Confidence 57899998 666785 45666666664
No 373
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=32.20 E-value=28 Score=33.92 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++|||| -||||+.+ .+.|-+.|.+|.+.=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 67999998 48888764 567889999988753
No 374
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=31.99 E-value=36 Score=30.77 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~-~~g~~v~~~K 38 (498)
++|+++|. +|-||-..+..|...|. ..|+++..+-
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~ 61 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLD 61 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEEC
Confidence 68899986 89999999999999998 7887765544
No 375
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=31.87 E-value=39 Score=31.96 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|| |+||||- |-+.+.+.+.|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 44 8999974 455566667777889998775
No 376
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=31.73 E-value=29 Score=33.36 Aligned_cols=30 Identities=33% Similarity=0.502 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 50 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRA-----AAIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999984 777765 456677889988764
No 377
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=31.49 E-value=37 Score=32.30 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.3
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|.++||||- -||||+.++ +.|.++|++|.+.-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 488987654 56777899998864443
No 378
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.43 E-value=39 Score=30.90 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=25.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g-~~v~~~K~Dp 41 (498)
||-|+||||- ++|| +.|.+.|.++| ++|.+.-.+|
T Consensus 23 mk~vlVtGat-G~iG-----~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA-----RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHH-----HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHH-----HHHHHHHHhCCCceEEEEEcCh
Confidence 5789999974 4444 45667788889 8988876554
No 379
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.42 E-value=31 Score=32.67 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 677654 56677788999987644
No 380
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.34 E-value=25 Score=33.70 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ||||+. +.+.|-++|++|.+.-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 777765 4566778899887753
No 381
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=31.22 E-value=37 Score=31.70 Aligned_cols=32 Identities=31% Similarity=0.323 Sum_probs=24.0
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||-- +|||+.++ +.|.++|++|.+.=
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALSY 41 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEEc
Confidence 6799999964 78888654 55666799887753
No 382
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=31.03 E-value=46 Score=31.60 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
||-|+||||- |-+.+.+.+.|.++|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6779999973 5556677777888999998753
No 383
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=31.00 E-value=31 Score=32.14 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~---~g~~v~~~K 38 (498)
|.++||||- ||||+.+ .+.|.+ +|++|.+.=
T Consensus 7 k~~lVTGas-~gIG~~i-----a~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRAL-----APQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHH-----HHHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHH-----HHHHHHhhcCCCeEEEEe
Confidence 789999985 7777654 444555 899887753
No 384
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=30.95 E-value=36 Score=31.80 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~ 35 (498)
++|+++|. +|-||+..+.-|...|.. |+.|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 789999999999998877 76553
No 385
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=30.87 E-value=39 Score=33.04 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=31.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g--~~v~~~-K~DpYlN 44 (498)
..|.|+|+ ||-||=..+..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 46788886 67789999999999998866 555555 7777653
No 386
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=30.65 E-value=31 Score=33.61 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
+.|.|||| ||-||..+|..|...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888887753
No 387
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=30.36 E-value=51 Score=31.50 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-|+||||- |-+.+.|.+.|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999974 5666777777888999998754443
No 388
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=30.32 E-value=51 Score=34.94 Aligned_cols=32 Identities=28% Similarity=0.272 Sum_probs=28.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|-||| +=||+.|++=|..+|++.|++|-.+
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~ 178 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLI 178 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEE
Confidence 6788888 5699999999999999999998765
No 389
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.28 E-value=41 Score=31.33 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||-= ||||+.+ .+.|.++|++|.+.
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6899999864 6788754 56677889987664
No 390
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.95 E-value=50 Score=29.62 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~-~~g~~v~~~K~D 40 (498)
||-|+||||- +++|+.+ .+.|. ++|++|...-.+
T Consensus 5 mk~vlVtGas-g~iG~~~-----~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXL-----TATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHH-----HHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHH-----HHHHHhcCCceEEEEecC
Confidence 4679999974 5555544 44444 899999887554
No 391
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=29.86 E-value=27 Score=34.26 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||- ||||+.+ .+.|.++|++|..+
T Consensus 3 k~vlVTGas-~GIG~al-----a~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHL-----AVRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHH-----HHHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCceEEE
Confidence 789999985 7888755 46677888887654
No 392
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=29.82 E-value=46 Score=31.12 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=23.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~-g~~v~~~K~Dp 41 (498)
|| |+||||. ..||+ .+-+.|..+ |++|.++--+|
T Consensus 1 M~-ilVtGat-G~iG~-----~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGT-----HITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHH-----HHHHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHH-----HHHHHHhhCCCCcEEEEECCH
Confidence 45 8999975 34454 444556666 99999886654
No 393
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=29.64 E-value=47 Score=31.80 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-|+||||- |-+.+.+.+.|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 679999974 5556667777778999998764443
No 394
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=29.56 E-value=28 Score=32.63 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
||-|+||||- ++||+- +.+.|.++|++|.+.-.++
T Consensus 3 ~k~vlVTGas-g~IG~~-----la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGRV-----MRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHHH-----HHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHhcCCEEEEEecCC
Confidence 4789999985 666654 5566778899998876665
No 395
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=29.43 E-value=33 Score=34.23 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+. +.+.|-++|++|.+.=.
T Consensus 46 k~vlVTGas-~GIG~a-----ia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKA-----IALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 789999996 777765 45667788998877643
No 396
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=29.28 E-value=34 Score=30.24 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=15.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ 25 (498)
+.|++||+ +|-||...+.-|..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899765544443
No 397
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=29.23 E-value=29 Score=34.03 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=10.3
Q ss_pred CCeEEEEEcccCCcc
Q 010866 296 EPVRIAMVGKYTGLS 310 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~ 310 (498)
+++|||||| +|..+
T Consensus 24 kkirvgiIG-~G~ig 37 (393)
T 4fb5_A 24 KPLGIGLIG-TGYMG 37 (393)
T ss_dssp CCCEEEEEC-CSHHH
T ss_pred CCccEEEEc-CCHHH
Confidence 358999999 77443
No 398
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=29.17 E-value=41 Score=30.75 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=19.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~-g~~v~~~K~DpY 42 (498)
..|.+||| +|-||-. +++.|+.+ |+.| +-.|=|
T Consensus 13 ~iIgltG~--~GSGKST----va~~L~~~lg~~v--id~D~~ 46 (192)
T 2grj_A 13 MVIGVTGK--IGTGKST----VCEILKNKYGAHV--VNVDRI 46 (192)
T ss_dssp EEEEEECS--TTSSHHH----HHHHHHHHHCCEE--EEHHHH
T ss_pred eEEEEECC--CCCCHHH----HHHHHHHhcCCEE--EECcHH
Confidence 35889999 4557854 45555555 7543 444433
No 399
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.12 E-value=1.5e+02 Score=27.14 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=20.6
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
..+||||+.+..... ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 479999997643221 3556666778898644
No 400
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=29.07 E-value=75 Score=29.22 Aligned_cols=66 Identities=23% Similarity=0.403 Sum_probs=42.4
Q ss_pred cchHhhHHHHhhhhcCCCCCCee---EEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcc-ccccCcchHHHHHH
Q 010866 89 TTGKIYQSVIDKERKGDYLGKTV---QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALG 164 (498)
Q Consensus 89 t~G~iy~~vi~kER~g~ylG~tv---QviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGdiEs~pf~ea~r 164 (498)
|+|....+.+++. .++|-.| .+||.=-++|++.|+++.. ..++|++|+ .||| +|+--=.| ||++
T Consensus 34 ~n~~~L~~~L~~~---~~~G~~v~~~~iv~Dd~~~I~~al~~a~~------~~~~DlVIt-tGGtg~g~~D~t~--eal~ 101 (189)
T 1jlj_A 34 RSGINLKDLVQDP---SLLGGTISAYKIVPDEIEEIKETLIDWCD------EKELNLILT-TGGTGFAPRDVTP--EATK 101 (189)
T ss_dssp HHHHHHHHHHHCT---TTTCCEEEEEEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHH
T ss_pred hHHHHHHHHHhch---hcCCcEEEEEEEeCCCHHHHHHHHHHHhh------cCCCCEEEE-cCCCCCCCcccHH--HHHH
Confidence 3555555555431 2345444 4778777889999998862 236898866 7887 66544445 8888
Q ss_pred Hh
Q 010866 165 QF 166 (498)
Q Consensus 165 q~ 166 (498)
++
T Consensus 102 ~~ 103 (189)
T 1jlj_A 102 EV 103 (189)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 401
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=29.01 E-value=93 Score=30.45 Aligned_cols=76 Identities=9% Similarity=0.173 Sum_probs=48.1
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCch
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~ 378 (498)
+|.+|+ - -..+...|.++-+.+|+.... =+|++- .++.-. . ..+..+|.||+..- .
T Consensus 106 ~iLfVg-T--k~~aq~~V~~~A~~~g~~yv~---~RWlgG-~LTN~~-~----------~~f~~PdlliV~Dp------~ 161 (253)
T 3bch_A 106 DVSVIS-S--RNTGQRAVLKFAAATGATPIA---GRFTPG-TFTNQI-Q----------AAFREPRLLVVTDP------R 161 (253)
T ss_dssp GEEEEE-C--SHHHHHHHHHHHHHHCCEEEE---SCCCTT-TTTCCS-C----------STTCSCSEEEESCT------T
T ss_pred eEEEEe-C--CHHHHHHHHHHHHHhCCeeec---ceecCC-cccCcc-c----------cccCCCCEEEEECC------C
Confidence 578886 2 112445677777777765433 368653 333211 0 13457899988752 2
Q ss_pred hHHHHHHHHHHcCCCEEeeh
Q 010866 379 GKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 379 g~i~~i~~a~e~~iPiLGIC 398 (498)
....++++|...++|+.|||
T Consensus 162 ~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 162 ADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp TTHHHHHHHHHTTCCEEEEE
T ss_pred ccchHHHHHHHhCCCEEEEE
Confidence 24578999999999999998
No 402
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=28.90 E-value=90 Score=29.95 Aligned_cols=32 Identities=6% Similarity=-0.050 Sum_probs=22.5
Q ss_pred CCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 362 ~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
++||||+.+ .. ......++.+.+.++|+.-+.
T Consensus 62 ~vDgiIi~~-~~----~~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 62 KPDYLMLVN-EQ----YVAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp CCSEEEEEC-CS----SHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEEeC-ch----hhHHHHHHHHHhCCCcEEEEc
Confidence 899999975 11 123456777778899998664
No 403
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=28.54 E-value=38 Score=31.46 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++||||-= +|||+. +.+.|-.+|++|.+.
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 7899999954 688764 456777889988764
No 404
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=28.53 E-value=55 Score=30.92 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
+|-|+||||- |-+.+.+.+.|.++|++|..+-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 3679999984 4555666777888999998865443
No 405
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=28.32 E-value=2.4e+02 Score=25.93 Aligned_cols=34 Identities=21% Similarity=0.009 Sum_probs=22.1
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+.. .......++.+.+.++|+.-+.
T Consensus 60 ~~vdgiii~~~~----~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 60 RKVDAITIVPND----ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TTCSEEEECCSC----HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEecCC----hHHHHHHHHHHHHCCCeEEEEe
Confidence 579999987631 1222345677777889987653
No 406
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=28.28 E-value=1.8e+02 Score=26.87 Aligned_cols=32 Identities=9% Similarity=-0.054 Sum_probs=20.7
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+...+ ...++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~------~~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH------DEDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC------HHHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC------HHHHHHHhhcCCCEEEEc
Confidence 47999999764321 134455556789987664
No 407
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=28.21 E-value=54 Score=28.84 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|| |+||||- ++||+.+ .+.|. +|++|.+.-.++
T Consensus 4 M~-vlVtGas-g~iG~~~-----~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAV-----KERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHH-----HHHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHH-----HHHHH-CCCeEEEEecCc
Confidence 45 8999984 6666654 44555 799999875554
No 408
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=28.07 E-value=43 Score=33.37 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=33.7
Q ss_pred CeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccc-cccCCChhhhHHHHHhcc--CCCEEEEcCC
Q 010866 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLED-ATEKENPDAYKAAWKLLK--GADGILVPGG 371 (498)
Q Consensus 297 ~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~-~~~~~~p~~y~~~~~~l~--~~DGIilpGG 371 (498)
++|||||| .+... ......++.+.++++....+. +.+..+. ...-..+..|.+..+.+. ++|.|+++--
T Consensus 26 ~irvgiiG-~G~~~--~~~~~~~~~~~~~~lvav~d~---~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVG-LNHNH--IYGQVNCLLRAGARLAGFHEK---DDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEEC-CCSTT--HHHHHHHHHHTTCEEEEEECS---CHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEEC-cCHHH--HHHHHHHhhcCCcEEEEEEcC---CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 57999999 66332 234566777666654432111 1110000 000001223444445554 4899999873
No 409
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=27.89 E-value=71 Score=29.36 Aligned_cols=39 Identities=23% Similarity=0.426 Sum_probs=32.4
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 3 ~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
.++++| -.|.||=.++..++..|. +|++|.++-.||--+
T Consensus 16 i~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 16 IVVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 344444 478999999999999999 999999999999644
No 410
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.79 E-value=33 Score=29.55 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.7
Q ss_pred chHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 15 GKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 15 GkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|=|.+-.|.+..|..+|++|+++-=.|.
T Consensus 9 GaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 9 GTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4478888999999999999999876654
No 411
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=27.79 E-value=41 Score=32.76 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=28.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
||..|++.| +.|==.-.-.|++.|++||+.|++.=-.
T Consensus 23 MRIL~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 23 MRALFITSP---GLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEECCC---chhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788898877 3343344568899999999999997543
No 412
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=27.64 E-value=3e+02 Score=28.61 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=21.5
Q ss_pred eEEEEEcccCCccchHHH-HHHHHHHcCCcceee
Q 010866 298 VRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKK 330 (498)
Q Consensus 298 v~IaIVgkY~~l~day~S-I~~AL~~aG~~~~v~ 330 (498)
.+|.++| .+..+ .| +.+.|...|+.+.+.
T Consensus 23 ~~v~viG-iG~sG---~s~~A~~l~~~G~~V~~~ 52 (494)
T 4hv4_A 23 RHIHFVG-IGGAG---MGGIAEVLANEGYQISGS 52 (494)
T ss_dssp CEEEEET-TTSTT---HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEE-EcHhh---HHHHHHHHHhCCCeEEEE
Confidence 4789998 55433 55 788999999888764
No 413
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=27.52 E-value=40 Score=32.39 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=26.6
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~----------S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||=- |--=-|-...+|.+.|..+|++|+++--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999942 11112344566778889999999988544
No 414
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=27.48 E-value=53 Score=30.42 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
+|.++||||- +|||+ ++.+.|-++|++|.+.
T Consensus 7 ~k~vlVTGas-~gIG~-----~~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGK-----QVTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHH-----HHHHHHHHCCCEEEEE
Confidence 4789999985 67776 4556677889988764
No 415
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=27.28 E-value=38 Score=30.09 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=16.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ 25 (498)
|+.|++||+ +|-||...+..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 678999998 77889765554443
No 416
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=26.95 E-value=86 Score=31.20 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=33.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
.+|.+.|- ||-||=.+.+.|+.+++..|.+|.+.-.|+|
T Consensus 130 ~vi~lvG~--nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 130 YVIMFVGF--NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 35667776 9999999999999999999999998877765
No 417
>3da7_A Barnase circular permutant; circular permutant, protein-protein complex, endonuclease, cytoplasm, protein binding; 2.25A {Bacillus amyloliquefaciens}
Probab=26.82 E-value=46 Score=28.73 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=21.8
Q ss_pred ccceEEEccCCccccCCCCccccccCCCCCCCCcccchH
Q 010866 54 EHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGK 92 (498)
Q Consensus 54 ~HgEvfV~~dG~E~DlDlG~YeRf~~~~l~~~~n~t~G~ 92 (498)
..|++|+|.| ||+-|.-+..+ .-+|++.
T Consensus 26 ~dg~~y~T~D---------HY~tF~~i~~~--~~~n~~~ 53 (111)
T 3da7_A 26 SDWLIYKTTD---------HYQTFTKIRCA--QVINTFD 53 (111)
T ss_dssp TTCCEEEESS---------TTSCCEECCCS--SCCSHHH
T ss_pred CCCCEEEecc---------hhhhhhcchhh--hhcCCch
Confidence 4689999988 99999999877 3455543
No 418
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=26.76 E-value=3.6e+02 Score=25.30 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=21.7
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+.. .......++.+.+.++|+.-+
T Consensus 61 ~~vdgiIi~~~~----~~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 61 EGVDLLIISANE----AAPMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp TTCSEEEECCSS----HHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCC----HHHHHHHHHHHHHCCCeEEEe
Confidence 579999997632 111234566677789998765
No 419
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=26.59 E-value=3e+02 Score=26.17 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=20.7
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
..+||||+.+...+ ...++.+.+.++|+.-+
T Consensus 123 ~~vdGiIi~~~~~~------~~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 123 WRPSGVIIAGLEHS------EAARAMLDAAGIPVVEI 153 (344)
T ss_dssp TCCSEEEEECSCCC------HHHHHHHHHCSSCEEEE
T ss_pred CCCCEEEEECCCCC------HHHHHHHHhCCCCEEEE
Confidence 46999999863221 14556666788998765
No 420
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=26.14 E-value=37 Score=30.40 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlN 44 (498)
+.|.+||+ ||-||...+..|...+. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 57889997 57789877776665432 467777888764
No 421
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=26.14 E-value=43 Score=32.19 Aligned_cols=34 Identities=32% Similarity=0.342 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
++.|+|||+ ||-||..+|.-| +..|+. .+-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~L----a~lg~~--~id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRL----KNLGAY--IIDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHH----HHHTCE--EEEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHH----HHCCCc--EEehhHH
Confidence 367999997 567887655544 445764 3555654
No 422
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=25.91 E-value=1.8e+02 Score=27.06 Aligned_cols=32 Identities=16% Similarity=0.435 Sum_probs=21.2
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+..... ..++.+.+.++|+.-+.
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 95 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLALG 95 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEEC
Confidence 479999998743221 44566667788886553
No 423
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=25.90 E-value=53 Score=31.50 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=23.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.++||||-= +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGasg~~GIG~ai-----a~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGI-----AKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999964 5788754 45677889988765
No 424
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=25.85 E-value=61 Score=32.14 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=30.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
||.+|+++| +.|==.-.-.|++.|+++|+.|+++--++
T Consensus 1 MrIl~~~~~---~~GH~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLSVCG---TRGDVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp CEEEEEEES---CHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEecC---CCccHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 788888887 45555667789999999999999986554
No 425
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=25.83 E-value=54 Score=31.44 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-|+||||- |-+.+.|...|.++|++|..+-.+|
T Consensus 20 ~~vlVtGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSA------GRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTT------SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCC------ChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 569999984 5666777788889999999875543
No 426
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=25.76 E-value=2.8e+02 Score=25.35 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=21.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+...+ . ....++.+.+.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEE
Confidence 57999999763221 1 123566677788998754
No 427
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=25.69 E-value=43 Score=30.50 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=18.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~ 32 (498)
|.|+||||- +|||+.++ +.|-++|+
T Consensus 3 k~vlITGas-ggiG~~la-----~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAG-KGIGRAIA-----LEFARAAR 27 (244)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHHHHTT
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHhcC
Confidence 789999984 77777554 45556787
No 428
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.65 E-value=2.7e+02 Score=27.07 Aligned_cols=29 Identities=14% Similarity=0.332 Sum_probs=20.8
Q ss_pred eEEEEEcccCCccchHHH-HHHHHHHcCCcceee
Q 010866 298 VRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKK 330 (498)
Q Consensus 298 v~IaIVgkY~~l~day~S-I~~AL~~aG~~~~v~ 330 (498)
.+|.++| .+. +=.| +.+.|...|+++.+.
T Consensus 5 ~~i~~iG-iGg---~Gms~~A~~L~~~G~~V~~~ 34 (326)
T 3eag_A 5 KHIHIIG-IGG---TFMGGLAAIAKEAGFEVSGC 34 (326)
T ss_dssp CEEEEES-CCS---HHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEEE-ECH---HHHHHHHHHHHhCCCEEEEE
Confidence 4788888 443 4455 778888999887764
No 429
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=25.48 E-value=65 Score=30.74 Aligned_cols=28 Identities=43% Similarity=0.488 Sum_probs=20.1
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 4 i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|+||||- |-+.+.+.+.|.++|++|..+
T Consensus 3 vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 3 VLVTGGS------GYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 8999973 444556666777789988764
No 430
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=25.40 E-value=2.3e+02 Score=26.37 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=21.0
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+.... .. ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 57 QGVDAIFIAPVVAT-GW---EPVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HTCSEEEECCSSSS-SC---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChh-hH---HHHHHHHHHCCCCEEEe
Confidence 47999999864321 11 23455666778998654
No 431
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=25.30 E-value=64 Score=29.55 Aligned_cols=30 Identities=30% Similarity=0.470 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|.|+||||- ++||+ .+.+.|.++|++|.+.
T Consensus 14 k~vlItGas-ggiG~-----~la~~l~~~G~~V~~~ 43 (260)
T 3awd_A 14 RVAIVTGGA-QNIGL-----ACVTALAEAGARVIIA 43 (260)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHH-----HHHHHHHHCCCEEEEE
Confidence 679999985 66665 4556677789988776
No 432
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.20 E-value=67 Score=33.64 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=37.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpYlNvd~gtmsP~~HgEvfV~~dG 64 (498)
+.|-||| +=||-.|++=|+.+|+..|++++.. +-..+| ..|+..-....+++|.|=|
T Consensus 123 ~~IaVTG----TnGKTTTt~ml~~iL~~~g~~~~~~-~gg~~~-~~g~~~~~~~~d~~VlE~~ 179 (494)
T 4hv4_A 123 HGIAVAG----THGKTTTTAMLSSIYAEAGLDPTFV-NGGLVK-AAGTHARLGSSRYLIAEAD 179 (494)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-EEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEec----CCChHHHHHHHHHHHHhcCCCCEEE-ECCccc-ccccccccCCCcEEEEEcc
Confidence 4688888 5699999999999999999975432 111122 1232212234688888765
No 433
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.10 E-value=1.4e+02 Score=27.24 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHH-HhccCCCEEEEcCCCCCCCchhHHHHHHHHHHc
Q 010866 312 AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAW-KLLKGADGILVPGGFGNRGVQGKILAAKYAREH 390 (498)
Q Consensus 312 ay~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~-~~l~~~DGIilpGG~g~~~~~g~i~~i~~a~e~ 390 (498)
+-..+.+.|+..|+.+... .+-+++. +.-.++. +.+.++|-||.+||-|-....-..+++..+.+.
T Consensus 24 N~~~l~~~L~~~G~~v~~~----~iv~Dd~---------~~I~~~l~~a~~~~DlVittGG~g~~~~D~T~ea~a~~~~~ 90 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRG----FVVMDDL---------DEIGWAFRVALEVSDLVVSSGGLGPTFDDMTVEGFAKCIGQ 90 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEE----EEECSCH---------HHHHHHHHHHHHHCSEEEEESCCSSSTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCEEEEE----EEeCCCH---------HHHHHHHHHHHhcCCEEEEcCCCcCCcccchHHHHHHHcCC
Confidence 3445788899999876432 1222221 1111121 223469999999987653333345666666654
Q ss_pred CCCEEeehHHHHHHHHHhc
Q 010866 391 RIPYLGICLGMQVAVIEFA 409 (498)
Q Consensus 391 ~iPiLGIClGmQll~va~g 409 (498)
.+++.+ --++.|--.|+
T Consensus 91 ~l~~~~--e~~~~i~~~~~ 107 (172)
T 3kbq_A 91 DLRIDE--DALAMIKKKYG 107 (172)
T ss_dssp CCEECH--HHHHHHHHHHC
T ss_pred CeeeCH--HHHHHHHHHHc
Confidence 444433 33455544443
No 434
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=25.04 E-value=1.3e+02 Score=25.36 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=43.3
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhc--cCCCEEEEcCCCC
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l--~~~DGIilpGG~g 373 (498)
+++||.+|++--. .-..+.+.|+..|+++.- .+.+- .++++.+ ..+|.+++== .
T Consensus 7 r~~rILiVdD~~~---~~~~l~~~L~~~G~~v~~-------~a~~g------------~eAl~~~~~~~~DlvllDi--~ 62 (123)
T 2lpm_A 7 RRLRVLVVEDESM---IAMLIEDTLCELGHEVAA-------TASRM------------QEALDIARKGQFDIAIIDV--N 62 (123)
T ss_dssp CCCCEEEESSSTT---TSHHHHHHHHHHCCCCCB-------CSCCH------------HHHHHHHHHCCSSEEEECS--S
T ss_pred CCCEEEEEeCCHH---HHHHHHHHHHHCCCEEEE-------EECCH------------HHHHHHHHhCCCCEEEEec--C
Confidence 4679999985442 335677888889987531 12211 1233333 4688887621 1
Q ss_pred CCCchhHHHHHHHHHHcCCCEE
Q 010866 374 NRGVQGKILAAKYAREHRIPYL 395 (498)
Q Consensus 374 ~~~~~g~i~~i~~a~e~~iPiL 395 (498)
-|+..| +++++..++.++|++
T Consensus 63 mP~~~G-~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 63 LDGEPS-YPVADILAERNVPFI 83 (123)
T ss_dssp SSSCCS-HHHHHHHHHTCCSSC
T ss_pred CCCCCH-HHHHHHHHcCCCCEE
Confidence 123333 356667777788964
No 435
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=24.95 E-value=84 Score=30.68 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=40.5
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 010866 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (498)
Q Consensus 22 s~g~ll~~~g~~v~~~K~DpYlNvd~gtm-sP~~HgEvfV~~dG~E----~DlDlG~Y 74 (498)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987655655555443 5999999999999854 47667754
No 436
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=24.95 E-value=2.2e+02 Score=25.58 Aligned_cols=32 Identities=13% Similarity=0.244 Sum_probs=20.2
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+.... . ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~----~~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPP-E----DDSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCS-S----CCHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCccc-c----HHHHHHHHHcCCCEEEE
Confidence 47999999874321 1 12345566678898654
No 437
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=24.93 E-value=1.2e+02 Score=27.94 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=20.6
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 469999997643211 34555666789987653
No 438
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=24.64 E-value=1.1e+02 Score=29.99 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=39.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe--eecccccCC--CCC---CCccccceEEEccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI--KIDPYLNTD--AGT---MSPFEHGEVFVLDDG 64 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~--K~DpYlNvd--~gt---msP~~HgEvfV~~dG 64 (498)
+.|-||| +=||=.|++=|+.+|+..|+++..+ .+-.-+|.. -|+ ..--+..+++|.|=+
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p~~~~~~~~~~~~V~E~s 174 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEAD 174 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCccccccCCCCCEEEEEcc
Confidence 5788898 5699999999999999999998642 122222221 121 111246789999844
No 439
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.32 E-value=84 Score=24.71 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g-~~v~~~K~Dp 41 (498)
+-|+|+|+ .++| .++...|..+| ++|.+.-.+|
T Consensus 6 ~~v~I~G~--G~iG-----~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA--GKIG-----QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC--SHHH-----HHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC--CHHH-----HHHHHHHHhCCCceEEEEeCCH
Confidence 56888886 5555 45667788889 8888765543
No 440
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=24.23 E-value=3.3e+02 Score=24.66 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=20.3
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHH-cCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e-~~iPiLGI 397 (498)
.++||||+.+...+ . ..++.+.+ .++|+.-+
T Consensus 76 ~~vdgii~~~~~~~---~---~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 76 LRCDAIMIYPRFLS---V---DEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp TTCSEEEEECSSSC---H---HHHHHHHHTCSSCEEEE
T ss_pred cCCCEEEEecCCCC---h---HHHHHHHhcCCCCEEEE
Confidence 57999999764221 1 34556666 78998765
No 441
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=24.20 E-value=67 Score=30.16 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=24.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv-~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-++|||+- -+|||+++ .+.|-+.|.+|.+.
T Consensus 7 K~alVTGaa~~~GIG~ai-----A~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGV-----AKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHHH-----HHHHHHCCCEEEEE
Confidence 789999975 35888765 56788899998775
No 442
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=24.16 E-value=35 Score=31.87 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.6
Q ss_pred CE-EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MK-YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k-~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|| =|+||||- |-+.+.+.+.|.++|++|..+--
T Consensus 4 M~m~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN------GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT------SHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCC------CHHHHHHHHHHHhCCCEEEEecc
Confidence 45 69999974 56666777788888999888643
No 443
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=24.11 E-value=78 Score=30.36 Aligned_cols=34 Identities=38% Similarity=0.351 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
||-|+||||- |-+.+.+.+.|.++|++|.++--+
T Consensus 21 ~~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGIC------GQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCc------cHHHHHHHHHHHHCCCEEEEEECC
Confidence 4569999974 445566777788889999887443
No 444
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=24.09 E-value=70 Score=30.24 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|=|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGT------GFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC------cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 569999974 666777778888899988876544
No 445
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=24.06 E-value=3.4e+02 Score=24.97 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=20.4
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+.... ...++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~------~~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT------DEHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC------HHHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC------HHHHHHHHhcCCCEEEEc
Confidence 57999999764211 134555566788987653
No 446
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=23.87 E-value=46 Score=31.78 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=23.8
Q ss_pred EEEEEeCCc---------------cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGV---------------VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv---------------~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-++||||- -+++|+ ++...|..+|++|+++-
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~-----aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGF-----AIAAAAARRGANVTLVS 55 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHH-----HHHHHHHHCCCEEEEEE
Confidence 679999995 233554 55677889999999863
No 447
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=23.86 E-value=78 Score=30.81 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- |-+.+.+.+.|.++|++|.++-.+
T Consensus 25 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGIT------GQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cEEEEECCC------chHHHHHHHHHHHCCCEEEEEECC
Confidence 679999974 444556666777789998876443
No 448
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=23.83 E-value=70 Score=30.14 Aligned_cols=31 Identities=35% Similarity=0.279 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|-|+||||- |-+.+.+-+.|.++|++|...-
T Consensus 2 k~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGT------GFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTT------SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCh------hHHHHHHHHHHHHCCCEEEEEE
Confidence 569999974 4455566666778899988653
No 449
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.81 E-value=56 Score=28.38 Aligned_cols=60 Identities=18% Similarity=0.162 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHhcccCCCCCCCccEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEEeeeee
Q 010866 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPV 185 (498)
Q Consensus 118 t~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdiEs-------~pf~ea~rq~~~~~g~~n~~~ih~t~vp~ 185 (498)
+..+..++.+... ...||+|+|.+|. .|+-. .-|.+.+++|-..+...+.-.+-++..|.
T Consensus 59 ~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 59 TSEMLVRFRQDVI------NLKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp HHHHHHHHHHHTG------GGCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHH------hCCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3455556654331 3469999999985 34422 34566666655444333444555555553
No 450
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=23.78 E-value=59 Score=28.25 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=19.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll 27 (498)
+.|+++|. ||-||...+.-|+..|
T Consensus 6 ~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899997 9999988777776655
No 451
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.60 E-value=71 Score=28.88 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.|+||||- ++||+. +.+.|.++|++|.+.-.
T Consensus 6 k~vlVtGas-ggiG~~-----~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-RGIGEA-----TARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 679999985 666654 45567778999877543
No 452
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=23.56 E-value=1e+02 Score=30.85 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=15.0
Q ss_pred CCCeEEEEEcccCCccchHHHHHHHHHHc
Q 010866 295 HEPVRIAMVGKYTGLSDAYLSILKALLHA 323 (498)
Q Consensus 295 ~~~v~IaIVgkY~~l~day~SI~~AL~~a 323 (498)
++++|||||| .|..+ ....++|+..
T Consensus 24 s~klrvgiIG-~G~ig---~~h~~~~~~~ 48 (412)
T 4gqa_A 24 SARLNIGLIG-SGFMG---QAHADAYRRA 48 (412)
T ss_dssp -CEEEEEEEC-CSHHH---HHHHHHHHHH
T ss_pred cccceEEEEc-CcHHH---HHHHHHHHhc
Confidence 4579999999 76433 2334555543
No 453
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=23.48 E-value=74 Score=28.87 Aligned_cols=32 Identities=41% Similarity=0.612 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.|+||||- ++||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAG-KGIGRGT-----VQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999984 6666644 4667778999887643
No 454
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=23.47 E-value=68 Score=29.38 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.|+||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 789999994 677754 5567778899988753
No 455
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=23.43 E-value=86 Score=30.55 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=40.1
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 010866 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (498)
Q Consensus 22 s~g~ll~~~g~~v~~~K~DpYlNvd~gtm-sP~~HgEvfV~~dG~E----~DlDlG~Y 74 (498)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 79 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 136 (278)
T 1w5r_A 79 LLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGGQ 136 (278)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCTT
T ss_pred HHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCcc
Confidence 36789999999999987655655554432 5999999999999854 46667653
No 456
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=23.38 E-value=67 Score=30.73 Aligned_cols=30 Identities=37% Similarity=0.414 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~ 37 (498)
|-|+||||- |-+.+.+.+.|.++|++|.++
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGA------GYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTT------SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 579999974 455566667777889988775
No 457
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.24 E-value=85 Score=28.55 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-++||||- +|||+ .+.+.|.++|++|.+.-.+|
T Consensus 4 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGS-----AILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHH-----HHHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEEecCc
Confidence 789999984 66665 45567788899998875443
No 458
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.15 E-value=84 Score=30.13 Aligned_cols=33 Identities=24% Similarity=0.097 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- |-+.+.|.+.|.++|++|..+-.+
T Consensus 26 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 26 KTWLITGVA------GFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999974 666777888888899999887543
No 459
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=22.96 E-value=2.6e+02 Score=27.01 Aligned_cols=27 Identities=26% Similarity=0.226 Sum_probs=17.4
Q ss_pred CeEEEEEccc-CCccchHHHHHHHHHHcCCcc
Q 010866 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDL 327 (498)
Q Consensus 297 ~v~IaIVgkY-~~l~day~SI~~AL~~aG~~~ 327 (498)
++|||||| . +... ....++|...+.++
T Consensus 3 mirvgiIG-~gG~i~---~~h~~~l~~~~~~l 30 (312)
T 3o9z_A 3 MTRFALTG-LAGYIA---PRHLKAIKEVGGVL 30 (312)
T ss_dssp CCEEEEEC-TTSSSH---HHHHHHHHHTTCEE
T ss_pred ceEEEEEC-CChHHH---HHHHHHHHhCCCEE
Confidence 57999999 6 3333 34567777766443
No 460
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=22.92 E-value=99 Score=30.02 Aligned_cols=68 Identities=15% Similarity=0.059 Sum_probs=33.1
Q ss_pred CeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCcccc-ccCCChhhhHHHHHhcc--CCCEEEEcC
Q 010866 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLK--GADGILVPG 370 (498)
Q Consensus 297 ~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~-~~~~~p~~y~~~~~~l~--~~DGIilpG 370 (498)
++|||||| .+..+ . ....++|.+.++++... .-.+.+..+.- ..-..+..|.+..+.+. ++|.|+++-
T Consensus 4 ~~rvgiiG-~G~~~-~-~~~~~~l~~~~~~lvav---~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 4 KIRFAAIG-LAHNH-I-YDMCQQLIDAGAELAGV---FESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CCEEEEEC-CSSTH-H-HHHHHHHHHTTCEEEEE---ECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECS
T ss_pred ccEEEEEC-CChHH-H-HHhhhhhcCCCcEEEEE---eCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeC
Confidence 57999998 65332 2 24567776666554322 11122211100 00001123444444554 589999986
No 461
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.77 E-value=79 Score=28.42 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-++||||- ++||+.+ .+.|.++|++|.+.-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 679999985 7777654 456777899998865443
No 462
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=22.77 E-value=77 Score=30.48 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=20.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~-g~~v~~~K~D 40 (498)
|| |+||||- ++|| +.+.+.|.++ |++|..+-.+
T Consensus 1 Mk-vlVTGas-G~iG-----~~l~~~L~~~~g~~V~~~~r~ 34 (361)
T 1kew_A 1 MK-ILITGGA-GFIG-----SAVVRHIIKNTQDTVVNIDKL 34 (361)
T ss_dssp CE-EEEESTT-SHHH-----HHHHHHHHHHCSCEEEEEECC
T ss_pred CE-EEEECCC-chHh-----HHHHHHHHhcCCCeEEEEecC
Confidence 67 8999984 3444 4444445445 7988876443
No 463
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=22.68 E-value=79 Score=29.62 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 8 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 8 HRILITGGA------GFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEECCC------ChHHHHHHHHHHHCCCEEEEEecC
Confidence 569999974 566677778888889999887444
No 464
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=22.65 E-value=2e+02 Score=26.14 Aligned_cols=29 Identities=21% Similarity=0.438 Sum_probs=19.9
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHH-HHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAK-YAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~-~a~e~~iPiLGI 397 (498)
..+||||+.+ . .-+.++ .+.+.++|+.-+
T Consensus 63 ~~~dgiIi~~-~-------~~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 63 HNCTGMISTA-F-------NENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp TTCSEEEECG-G-------GHHHHHHHHHHC-CCEEEG
T ss_pred CCCCEEEEec-C-------ChHHHHHHHHcCCCCEEEE
Confidence 5799999976 1 123466 777889999765
No 465
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=22.64 E-value=2.8e+02 Score=25.86 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=22.3
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
.++||||+.+.... .....++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~~----~~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT----AVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSSTT----TTHHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChH----HHHHHHHHHHHCCCeEEEeC
Confidence 57999999763221 12345666777899987653
No 466
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=22.43 E-value=71 Score=26.70 Aligned_cols=27 Identities=41% Similarity=0.551 Sum_probs=19.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v 34 (498)
++|+++|. +|-||...|.-| +..|+.+
T Consensus 2 ~~I~l~G~--~GsGKsT~a~~L----~~~g~~~ 28 (179)
T 3lw7_A 2 KVILITGM--PGSGKSEFAKLL----KERGAKV 28 (179)
T ss_dssp CEEEEECC--TTSCHHHHHHHH----HHTTCEE
T ss_pred cEEEEECC--CCCCHHHHHHHH----HHCCCcE
Confidence 47889986 788897766544 7777764
No 467
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.43 E-value=84 Score=30.66 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~D 40 (498)
|-|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 29 k~vlVtGat------G~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGIT------GQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEcCC------chHHHHHHHHHHHCCCEEEEEecC
Confidence 679999973 444556666777889998876443
No 468
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=22.43 E-value=69 Score=28.46 Aligned_cols=27 Identities=37% Similarity=0.444 Sum_probs=18.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~ 33 (498)
|+.|.+||+ +|-||..++ ++|...|+.
T Consensus 2 ~~~i~l~G~--~GsGKST~~----~~La~lg~~ 28 (206)
T 1jjv_A 2 TYIVGLTGG--IGSGKTTIA----NLFTDLGVP 28 (206)
T ss_dssp CEEEEEECS--TTSCHHHHH----HHHHTTTCC
T ss_pred CcEEEEECC--CCCCHHHHH----HHHHHCCCc
Confidence 367899998 677896554 555445643
No 469
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.42 E-value=88 Score=28.25 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|-|+||||- ++|| +.+.+.|.++|++|.++-.+|
T Consensus 22 ~~ilVtGat-G~iG-----~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGAN-GKVA-----RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTT-SHHH-----HHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCC-ChHH-----HHHHHHHHhCCCeEEEEECCh
Confidence 458999974 4444 455566777899999886543
No 470
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=22.35 E-value=81 Score=32.53 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=31.3
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCccEEEEeeCcc-ccccCcchHHHHHHHh
Q 010866 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (498)
Q Consensus 111 vQviPHit~ei~~~i~~~~~~pvd~~~~~~dv~i~EiGGT-vGdiEs~pf~ea~rq~ 166 (498)
..++|+=-++|++.|++... ++|++|+ .||| +|+-.=.| ||++++
T Consensus 226 ~~iv~Dd~~~i~~~l~~a~~--------~~DlVit-tGG~s~g~~D~t~--~al~~~ 271 (402)
T 1uz5_A 226 MGVARDDKESLKALIEKAVN--------VGDVVVI-SGGASGGTKDLTA--SVIEEL 271 (402)
T ss_dssp EEEECSSHHHHHHHHHHHHH--------HCSEEEE-ECCC-----CHHH--HHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHhh--------CCCEEEE-cCCCCCCCcccHH--HHHHhh
Confidence 34778778899999998862 4799887 8887 67654444 888876
No 471
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=22.34 E-value=78 Score=30.38 Aligned_cols=33 Identities=33% Similarity=0.426 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
+|-|+||||- |-+.+.|.+.|.++|++|..+-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGA------GFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEcCc------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 55666777778888999988643
No 472
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.27 E-value=86 Score=30.19 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
+|-|+||||- |-+.+.+.+.|.++|++|..+-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVA------GFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 44556666777788998887644
No 473
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=22.11 E-value=1e+02 Score=31.13 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=32.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY---lNvd~gtmsP 52 (498)
+.|+|+|+ ||-||-..|..|...| | +.++-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l---~--~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKF---N--GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT---T--EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHc---C--CceeccccccccccccccccCC
Confidence 47889997 6778988877776654 2 678888884 6677777554
No 474
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.09 E-value=79 Score=29.58 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 33 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGAS-GGIGAAV-----ARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999985 6676644 4566678999877533
No 475
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=22.07 E-value=77 Score=30.23 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=26.7
Q ss_pred CEEEEEeCCccCCcchHHH--HHHHHHHHHHCCCeeEEeeec
Q 010866 1 MKYVLVTGGVVSGLGKGVT--ASSIGVLLKACGLRVTCIKID 40 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~--~as~g~ll~~~g~~v~~~K~D 40 (498)
||..|+++| .| |.. +..+..-|+.+|+.|+++-.+
T Consensus 7 mkIl~~~~~----~g-G~~~~~~~la~~L~~~G~~V~v~~~~ 43 (364)
T 1f0k_A 7 KRLMVMAGG----TG-GHVFPGLAVAHHLMAQGWQVRWLGTA 43 (364)
T ss_dssp CEEEEECCS----SH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred cEEEEEeCC----Cc-cchhHHHHHHHHHHHcCCEEEEEecC
Confidence 588888865 34 543 458999999999999987654
No 476
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=21.98 E-value=74 Score=30.00 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
|-|+||||- |-+.+.+.+.|.++|++|..+-.
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTGAT------GLLGRAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CeEEEECCC------cHHHHHHHHHHHhCCCeEEEEcc
Confidence 569999974 55666777778889999987643
No 477
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=21.95 E-value=2e+02 Score=28.07 Aligned_cols=96 Identities=19% Similarity=0.201 Sum_probs=59.9
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCch
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~ 378 (498)
+|.+|+ - -..+...|.++-...|+.... =+|++- .++.... ..+..+|.||+.. | .
T Consensus 72 ~vlfVg-T--k~~~q~~V~k~A~~~g~~~v~---~rwlgG-tLTN~~t-----------~~f~~PdllvV~D-p-----~ 127 (252)
T 3u5c_A 72 DVVAIS-S--RTFGQRAVLKFAAHTGATPIA---GRFTPG-SFTNYIT-----------RSFKEPRLVIVTD-P-----R 127 (252)
T ss_dssp GEEEEE-C--SHHHHHHHHHHHHHSSCEEEE---SCCCTT-SSSCTTS-----------TTCCCCSEEEESC-T-----T
T ss_pred EEEEEe-C--CcHHHHHHHHHHHHhCCceec---CcccCC-cccChhh-----------hhccCCceEEEeC-C-----c
Confidence 577887 2 122455677777777765433 367653 3332110 2356789999875 2 2
Q ss_pred hHHHHHHHHHHcCCCEEeeh--------------------HHHHHHHHHhcchhcccCCC
Q 010866 379 GKILAAKYAREHRIPYLGIC--------------------LGMQVAVIEFARSVLNLRDA 418 (498)
Q Consensus 379 g~i~~i~~a~e~~iPiLGIC--------------------lGmQll~va~g~~v~~lk~~ 418 (498)
....++++|...++|+.|+| .-.+|+.-.+++.++.++..
T Consensus 128 ~d~~ai~EA~~l~IP~Ial~DTn~~p~~VD~~IP~Ndds~~SI~Li~~~La~aVl~~rg~ 187 (252)
T 3u5c_A 128 SDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGA 187 (252)
T ss_dssp TTHHHHHHHHTTTCCEEEEECTTCCCTTCSSEEECCTTSTTHHHHHHHHHHHHHHSSSSS
T ss_pred cchHHHHHHHHcCCCEEEEEcCCCCcccCCEEEeCCCCCcchHHHHHHHHHHHHHHhcCC
Confidence 34578899999999999999 23455555666666655544
No 478
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=21.86 E-value=44 Score=36.10 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ||||+. +.+.|-++|.+|.+.-
T Consensus 20 k~~lVTGas-~GIG~a-----iA~~La~~Ga~Vv~~~ 50 (613)
T 3oml_A 20 RVAVVTGAG-AGLGRE-----YALLFAERGAKVVVND 50 (613)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEC-
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999986 778775 4567778899998753
No 479
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=21.84 E-value=67 Score=27.66 Aligned_cols=25 Identities=36% Similarity=0.514 Sum_probs=18.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll 27 (498)
+++|+++|+ +|-||...+..|...|
T Consensus 6 ~~~I~l~G~--~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGG--PGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEES--TTSSHHHHHHHHHHHH
T ss_pred CcEEEEECC--CCCCHHHHHHHHHHHh
Confidence 368999997 6788987776665533
No 480
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=21.78 E-value=42 Score=30.90 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=21.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- +|||+.++- .|.. |++|.+.-
T Consensus 6 k~vlITGas-~gIG~~~a~-----~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGAT-GGMGIEIVK-----DLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTT-SHHHHHHHH-----HHTT-TSEEEEEE
T ss_pred CEEEEEcCC-CHHHHHHHH-----HHhC-CCeEEEEe
Confidence 679999984 788876543 3433 88877653
No 481
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.78 E-value=2.4e+02 Score=23.59 Aligned_cols=79 Identities=10% Similarity=-0.029 Sum_probs=46.1
Q ss_pred CCCeEEEEEcccCCccchH--HHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCC
Q 010866 295 HEPVRIAMVGKYTGLSDAY--LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (498)
Q Consensus 295 ~~~v~IaIVgkY~~l~day--~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~ 372 (498)
.+++||.++..-| ..-+. ..+.++.+..|+++.+. -.+..+++ +.+.++|-|++++
T Consensus 4 ~~~mkIlL~C~aG-mSTsllv~km~~~a~~~gi~v~i~----a~~~~~~~---------------~~~~~~DvvLLgP-- 61 (108)
T 3nbm_A 4 SKELKVLVLCAGS-GTSAQLANAINEGANLTEVRVIAN----SGAYGAHY---------------DIMGVYDLIILAP-- 61 (108)
T ss_dssp -CCEEEEEEESSS-SHHHHHHHHHHHHHHHHTCSEEEE----EEETTSCT---------------TTGGGCSEEEECG--
T ss_pred ccCceEEEECCCC-CCHHHHHHHHHHHHHHCCCceEEE----EcchHHHH---------------hhccCCCEEEECh--
Confidence 3568999987444 32122 23456666667665542 12222221 3467799999854
Q ss_pred CCCCchhHHHHHHHHH-HcCCCEEeeh
Q 010866 373 GNRGVQGKILAAKYAR-EHRIPYLGIC 398 (498)
Q Consensus 373 g~~~~~g~i~~i~~a~-e~~iPiLGIC 398 (498)
.+....+.++... +.++|+.=|-
T Consensus 62 ---QV~y~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 62 ---QVRSYYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp ---GGGGGHHHHHHHHTTTTCEEEECC
T ss_pred ---HHHHHHHHHHHHhhhcCCcEEEeC
Confidence 4555666666655 3579998764
No 482
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=21.52 E-value=85 Score=27.50 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=25.4
Q ss_pred CCCccEEEEeeCccccccCcc--hHHHHHHHhhhh---cCCCCEEEEEEeeeeee
Q 010866 137 EGPVDVCVIELGGTIGDIESM--PFIEALGQFSYR---VGPGNFCLIHVSLVPVL 186 (498)
Q Consensus 137 ~~~~dv~i~EiGGTvGdiEs~--pf~ea~rq~~~~---~g~~n~~~ih~t~vp~~ 186 (498)
..+||+|++.+|.- |+-.. -|.+.+++|-.. .++ ++-.|-++..|..
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p-~~~ii~~~~~P~~ 123 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAP-KAKLIWANTTPVR 123 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCT-TCEEEEECCCCCE
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCC-CccEEEeccCCCc
Confidence 35799999999964 54322 255555555332 233 2334444444543
No 483
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=21.50 E-value=4.5e+02 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=22.6
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
..+||||+.+... ......++.+.+.++|+.-+.
T Consensus 58 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 58 KGVKALAINLVDP----AAAGTVIEKARGQNVPVVFFN 91 (309)
T ss_dssp TTCSEEEECCSSG----GGHHHHHHHHHTTTCCEEEES
T ss_pred cCCCEEEEeCCCc----chhHHHHHHHHHCCCcEEEec
Confidence 5799999976321 122345677777899987664
No 484
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=21.44 E-value=63 Score=31.62 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=27.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
||.+|+|.| +-|==.....|++-|+++|+.|++.--
T Consensus 16 MrIl~~~~~---~~gh~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 16 MRILVIAGC---SEGFVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEEcCC---CcchHHHHHHHHHHHHHCCCEEEEEcC
Confidence 789999876 333333356899999999999998754
No 485
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=21.42 E-value=1.5e+02 Score=27.29 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=9.3
Q ss_pred cCCCEEEEcCCC
Q 010866 361 KGADGILVPGGF 372 (498)
Q Consensus 361 ~~~DGIilpGG~ 372 (498)
..+||||+.+..
T Consensus 63 ~~vdgiIi~~~~ 74 (291)
T 3egc_A 63 RRVDGLILAPSE 74 (291)
T ss_dssp TTCSEEEECCCS
T ss_pred CCCCEEEEeCCC
Confidence 579999998743
No 486
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=21.35 E-value=70 Score=31.83 Aligned_cols=35 Identities=14% Similarity=0.168 Sum_probs=27.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
||+.|+|.|. .|==.-...|++-|+++|+.|++.-
T Consensus 1 MrIli~~~gt---~Ghv~p~~~La~~L~~~Gh~V~v~~ 35 (404)
T 3h4t_A 1 MGVLITGCGS---RGDTEPLVALAARLRELGADARMCL 35 (404)
T ss_dssp -CEEEEEESS---HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEeCCC---CccHHHHHHHHHHHHHCCCeEEEEe
Confidence 7888998774 3544557889999999999999964
No 487
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=21.32 E-value=57 Score=31.86 Aligned_cols=24 Identities=8% Similarity=0.243 Sum_probs=16.8
Q ss_pred CCeEEEEEcccCCccchHHHHHHHHHHc
Q 010866 296 EPVRIAMVGKYTGLSDAYLSILKALLHA 323 (498)
Q Consensus 296 ~~v~IaIVgkY~~l~day~SI~~AL~~a 323 (498)
+++|||+|| .|..+ ....++|...
T Consensus 4 ~~~~igiiG-~G~~g---~~~~~~l~~~ 27 (330)
T 3e9m_A 4 DKIRYGIMS-TAQIV---PRFVAGLRES 27 (330)
T ss_dssp CCEEEEECS-CCTTH---HHHHHHHHHS
T ss_pred CeEEEEEEC-chHHH---HHHHHHHHhC
Confidence 358999998 77554 3456777764
No 488
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.29 E-value=18 Score=33.12 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhhcCCCCCeEEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCcccc-ccCCChhhhHHHHH
Q 010866 280 LLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWK 358 (498)
Q Consensus 280 ~l~~W~~lv~~v~~~~~~v~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~-~~~~~p~~y~~~~~ 358 (498)
.++.++++++. .-+|+.+|.=+-+ ....+.+..+ ++. -+..+||..++++. .+...+..|.- .
T Consensus 15 ~L~~Fk~~v~~------~~kIvf~Gs~GvC----tPFaeL~~Ya-iR~---~~~~FiP~~d~e~a~~l~~~~~G~~~--~ 78 (157)
T 2r47_A 15 HLGVFREAVKD------AERIGFAGVPGVC----TPFAQLFAYA-VRD---KDNIFIPNTDFSKARKLEVTEYGVEL--G 78 (157)
T ss_dssp HHHHHHHHTTT------CSEEEEEECTTTT----HHHHHHHHHH-TTT---SEEEEEETTCGGGCEEEEEETTEEEE--E
T ss_pred HHHHHHHHhcC------CCeEEEECCCeee----cCHHhhheee-eeC---CceEEcCCCChhHceEEEEecCceEe--c
Confidence 45566665444 2279998844423 2333333222 222 25667777666531 01000001100 0
Q ss_pred hc--cCCCEEEEcCCCCCCC----chhHHHHHHHHHHcCCCEEeehH
Q 010866 359 LL--KGADGILVPGGFGNRG----VQGKILAAKYAREHRIPYLGICL 399 (498)
Q Consensus 359 ~l--~~~DGIilpGG~g~~~----~~g~i~~i~~a~e~~iPiLGICl 399 (498)
.. .++|.|+|-||-.-|. .+..-+.+....+.+..+.|||.
T Consensus 79 ~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 79 EISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp EECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 11 4789999999977662 34555666666666677999995
No 489
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=21.27 E-value=67 Score=31.38 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=42.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeeccccc-----CCCCC----CCccccceEEEccCC
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKIDPYLN-----TDAGT----MSPFEHGEVFVLDDG 64 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~-~~g~~v~~~K~DpYlN-----vd~gt----msP~~HgEvfV~~dG 64 (498)
+-++++|. +|.||=-.|.+|+..+. .+|++|..+-..-+++ ...|. +.-+..-.|.+.||=
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lLiiDdi 223 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDI 223 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHHCCCC----CCTTHHHHTSSEEEEETC
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHHHHhccchHHHHHHHhcCCCEEEEcCC
Confidence 45788997 79999999999999999 9999998777654433 22332 222334457777763
No 490
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=21.23 E-value=48 Score=30.84 Aligned_cols=29 Identities=34% Similarity=0.408 Sum_probs=19.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEE
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTC 36 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g--~~v~~ 36 (498)
|-++||||- +|||+.++ +.|.++| .+|..
T Consensus 3 k~~lVTGas-~GIG~aia-----~~l~~~g~~~~v~~ 33 (254)
T 3kzv_A 3 KVILVTGVS-RGIGKSIV-----DVLFSLDKDTVVYG 33 (254)
T ss_dssp CEEEECSTT-SHHHHHHH-----HHHHHHCSSCEEEE
T ss_pred CEEEEECCC-chHHHHHH-----HHHHhcCCCeEEEE
Confidence 889999986 78887654 4444444 55543
No 491
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.23 E-value=90 Score=28.34 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ++||+. +.+.|.++|++|.+.=
T Consensus 8 k~vlVTGas-ggiG~~-----~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 8 KRVLITGSS-QGIGLA-----TARLFARAGAKVGLHG 38 (258)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEC
Confidence 679999984 666664 4556777899887653
No 492
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.21 E-value=82 Score=28.53 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 010866 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (498)
Q Consensus 2 k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K 38 (498)
|.++||||- ++||+.+ .+.|.++|++|.+.-
T Consensus 8 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 8 KVSLVTGST-RGIGRAI-----AEKLASAGSTVIITG 38 (248)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 456667899887753
No 493
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=21.21 E-value=2.9e+02 Score=25.31 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=20.3
Q ss_pred cCCCEEEEcCCCCCCCchhHHHHHHHHHHcCCCEEee
Q 010866 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (498)
Q Consensus 361 ~~~DGIilpGG~g~~~~~g~i~~i~~a~e~~iPiLGI 397 (498)
.++||||+.+...+ ... ..++.+. .++|+.-+
T Consensus 62 ~~vdgiii~~~~~~-~~~---~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 62 WGANAIILGTVDPH-AYE---HNLKSWV-GNTPVFAT 93 (304)
T ss_dssp HTCSEEEECCSSTT-SST---TTHHHHT-TTSCEEEC
T ss_pred cCCCEEEEeCCChh-HHH---HHHHHHc-CCCCEEEe
Confidence 47999999864322 112 2345566 78998766
No 494
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=21.17 E-value=92 Score=30.57 Aligned_cols=38 Identities=32% Similarity=0.475 Sum_probs=32.3
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 3 ~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
+|.+.|- ||-||=.+.+.|+.+++..|.+|.+.-.|.|
T Consensus 104 vi~lvG~--nGsGKTTll~~Lagll~~~~g~V~l~g~D~~ 141 (304)
T 1rj9_A 104 VVLVVGV--NGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 141 (304)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred EEEEECC--CCCcHHHHHHHHHHHHHhcCCEEEEEeecCC
Confidence 6777764 9999999999999999999989888766654
No 495
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=21.14 E-value=65 Score=31.43 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=26.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~ 39 (498)
||.+|+|+|. -|==..+..|..-|+++|+.|+++--
T Consensus 21 MrIl~~~~~~---~Gh~~~~~~la~~L~~~GheV~v~~~ 56 (412)
T 3otg_A 21 MRVLFASLGT---HGHTYPLLPLATAARAAGHEVTFATG 56 (412)
T ss_dssp CEEEEECCSS---HHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEEcCCC---cccHHHHHHHHHHHHHCCCEEEEEcc
Confidence 7899999772 12112245789999999999999854
No 496
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.12 E-value=1.5e+02 Score=27.98 Aligned_cols=76 Identities=16% Similarity=0.116 Sum_probs=48.6
Q ss_pred EEEEEcccCCccchHHHHHHHHHHcCCcceeeeEEEEecCCCccccccCCChhhhHHHHHhccCCCEEEEcCCCCCCCch
Q 010866 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (498)
Q Consensus 299 ~IaIVgkY~~l~day~SI~~AL~~aG~~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~l~~~DGIilpGG~g~~~~~ 378 (498)
+|.+|+-- ..+...|.++-+..|+..... +|++- .++.... +....+|.+++.. + .
T Consensus 66 ~ilfV~tk---~~~~~~V~k~A~~~g~~~v~~---rw~gG-~lTN~~~-----------~~~~~Pdllvv~D----p--~ 121 (202)
T 3j20_B 66 SILAVSVR---LYGQKPVKKFGEVTGARAIPG---RFLPG-TMTNPAV-----------KNFFEPDVLIVTD----P--R 121 (202)
T ss_dssp CEEEECCC---TTTHHHHHHHHHHHSCCCCCS---SCCSS-SSSCSSS-----------SSCCCCSEEEESC----T--T
T ss_pred eEEEEecC---hHHHHHHHHHHHHHCCceeCc---eecCC-CcccHhH-----------HhccCCCeEEEeC----C--c
Confidence 68888722 125567777777777654332 57653 3332111 1235789999874 2 2
Q ss_pred hHHHHHHHHHHcCCCEEeeh
Q 010866 379 GKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 379 g~i~~i~~a~e~~iPiLGIC 398 (498)
....++++|...++|+.|+|
T Consensus 122 ~d~~ai~EA~~l~IP~Ial~ 141 (202)
T 3j20_B 122 ADHQAMREAVEIGIPIVALV 141 (202)
T ss_dssp TSHHHHHHHHHHTCCEEEEE
T ss_pred cchHHHHHHHHcCCCEEEEE
Confidence 24578889999999999999
No 497
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.08 E-value=94 Score=30.81 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=29.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 1 ~k~i~vtGgv~S~lGkGi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
||.+|+++|. .|==.-+-.|++.|+++|++|+++--+++
T Consensus 1 M~Il~~~~~~---~GHv~P~l~la~~L~~~Gh~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLATCGS---RGDTEPLVALAVRVRDLGADVRMCAPPDC 39 (415)
T ss_dssp CEEEEECCSC---HHHHHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CeEEEEcCCC---chhHHHHHHHHHHHHHCCCeEEEEcCHHH
Confidence 7888888772 34335566789999999999999876653
No 498
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=21.07 E-value=54 Score=27.70 Aligned_cols=26 Identities=23% Similarity=0.272 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHCCCeeEEeeeccc
Q 010866 17 GVTASSIGVLLKACGLRVTCIKIDPY 42 (498)
Q Consensus 17 Gi~~as~g~ll~~~g~~v~~~K~DpY 42 (498)
|-...++.+.|+++|++|..+-.||-
T Consensus 16 G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 16 GRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 66888999999999999999998874
No 499
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=21.02 E-value=67 Score=31.26 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=26.9
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 010866 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (498)
Q Consensus 2 k~i~vtGgv~-S~lGkGi~~as~g~ll~~~g~~v~~~K~Dp 41 (498)
|.++|||+-= ||||+.+ .+.|-++|++|.+.=.+|
T Consensus 3 k~~lITGas~~~GIG~ai-----A~~la~~G~~Vv~~~~~~ 38 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGI-----AKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHHTTCEEEEEECHH
T ss_pred cEEEEECCCCCCchHHHH-----HHHHHHCCCEEEEEecCc
Confidence 7899999864 6999864 567778999998765444
No 500
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=21.00 E-value=4.5e+02 Score=24.70 Aligned_cols=91 Identities=15% Similarity=0.119 Sum_probs=50.0
Q ss_pred CCCeEEEEEcccCC-cc----chHHHHHHHHHHcCC-cceeeeEEEEecCCCccccccCCChhhhHHHHHh-c--cCCCE
Q 010866 295 HEPVRIAMVGKYTG-LS----DAYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-L--KGADG 365 (498)
Q Consensus 295 ~~~v~IaIVgkY~~-l~----day~SI~~AL~~aG~-~~~v~v~i~~I~se~l~~~~~~~~p~~y~~~~~~-l--~~~DG 365 (498)
.++++||++-.... .. +....+..+++..|. -....+++.+.+.. .+|.......+. + .++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~--------~~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDA--------AIPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECT--------TCHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCC--------CCHHHHHHHHHHHHhcCCcEE
Confidence 35689999975532 11 123345566666665 33456666666653 233332222232 3 46899
Q ss_pred EEEcCCCCCCCchhHHHHHHHHHHcCCCEEeeh
Q 010866 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (498)
Q Consensus 366 IilpGG~g~~~~~g~i~~i~~a~e~~iPiLGIC 398 (498)
||-|-+. .........+.+.++|++..+
T Consensus 76 iiG~~~s-----~~~~~~~~~~~~~~ip~i~~~ 103 (368)
T 4eyg_A 76 IAGFGIT-----PAALAAAPLATQAKVPEIVMA 103 (368)
T ss_dssp EEECSSH-----HHHHHHHHHHHHHTCCEEESS
T ss_pred EECCCcc-----HHHHHHHHHHHhCCceEEecc
Confidence 8844321 122344556667899998775
Done!