Your job contains 1 sequence.
>010868
MSLVLWNKPLFSALSSLELRTSLTSSSRSTPFEQNSSFWSLTMDNERKTKKKKERQLPEK
KTALPLEEEDIEDLFSEKEVKKIRQSLLQWYDKNQRELPWRERSESDKEEEKEKRAYGVW
VSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAK
MIVAEGDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANP
KDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSK
RDNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAG
LWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSHIRLKV
HVELLVLCIKGGIDKWVEKQDKGTLSWKCVDGGTLASMGLTSGVRKVYTMVQKFKQKRLT
TNSIPERKRTNTKRLRCS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010868
(498 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135828 - symbol:AT4G12740 species:3702 "Arabi... 1094 8.7e-111 1
MGI|MGI:1917853 - symbol:Mutyh "mutY homolog (E. coli)" s... 657 9.5e-80 2
ZFIN|ZDB-GENE-081104-193 - symbol:mutyh "mutY homolog (E.... 633 1.5e-79 2
UNIPROTKB|E2RG99 - symbol:MUTYH "Uncharacterized protein"... 661 8.4e-79 2
UNIPROTKB|E1BZT8 - symbol:MUTYH "Uncharacterized protein"... 647 5.9e-78 2
UNIPROTKB|F1P514 - symbol:MUTYH "Uncharacterized protein"... 647 5.9e-78 2
UNIPROTKB|E5KP25 - symbol:MUTYH "A/G-specific adenine DNA... 634 3.7e-74 2
UNIPROTKB|Q9UIF7 - symbol:MUTYH "A/G-specific adenine DNA... 634 3.7e-74 2
DICTYBASE|DDB_G0270764 - symbol:myh "monofunctional DNA g... 645 2.0e-72 3
RGD|620045 - symbol:Mutyh "mutY homolog (E. coli)" specie... 649 1.2e-63 1
UNIPROTKB|Q8R5G2 - symbol:Mutyh "A/G-specific adenine DNA... 649 1.2e-63 1
UNIPROTKB|F1S368 - symbol:MUTYH "Uncharacterized protein"... 642 6.9e-63 1
UNIPROTKB|Q5T413 - symbol:MUTYH "A/G-specific adenine DNA... 634 4.8e-62 1
UNIPROTKB|F1N4K4 - symbol:MUTYH "Uncharacterized protein"... 631 1.0e-61 1
POMBASE|SPAC26A3.02 - symbol:myh1 "adenine DNA glycosylas... 481 4.2e-59 2
TIGR_CMR|CBU_0940 - symbol:CBU_0940 "A/G-specific adenine... 448 8.6e-47 2
TIGR_CMR|SPO_3448 - symbol:SPO_3448 "A/G-specific adenine... 434 6.7e-45 2
TIGR_CMR|CPS_4148 - symbol:CPS_4148 "A/G-specific adenine... 432 8.6e-45 2
UNIPROTKB|E9PM53 - symbol:MUTYH "A/G-specific adenine DNA... 470 1.2e-44 1
UNIPROTKB|Q9KUR3 - symbol:VC_0452 "A/G-specific adenine g... 418 1.7e-44 3
TIGR_CMR|VC_0452 - symbol:VC_0452 "A/G-specific adenine g... 418 1.7e-44 3
UNIPROTKB|P17802 - symbol:mutY "adenine glycosylase; G.C ... 437 2.9e-44 2
TIGR_CMR|SO_3368 - symbol:SO_3368 "A/G-specific adenine g... 425 2.9e-44 2
GENEDB_PFALCIPARUM|PF11_0306 - symbol:PF11_0306 "A/G-spec... 359 4.2e-43 3
UNIPROTKB|Q8II68 - symbol:PF11_0306 "A/G-specific adenine... 359 4.2e-43 3
TIGR_CMR|BA_0522 - symbol:BA_0522 "A/G-specific adenine g... 446 4.0e-42 1
TIGR_CMR|CJE_1792 - symbol:CJE_1792 "A/G-specific adenine... 421 7.5e-42 2
UNIPROTKB|Q5T418 - symbol:MUTYH "A/G-specific adenine DNA... 418 3.7e-39 1
UNIPROTKB|O53574 - symbol:mutY "PROBABLE ADENINE GLYCOSYL... 314 3.9e-28 1
TIGR_CMR|GSU_1613 - symbol:GSU_1613 "A/G-specific adenine... 249 9.9e-21 1
UNIPROTKB|H0YEI2 - symbol:MUTYH "A/G-specific adenine DNA... 239 1.3e-19 1
UNIPROTKB|H0YCY5 - symbol:MUTYH "A/G-specific adenine DNA... 128 6.2e-12 2
TIGR_CMR|DET_0935 - symbol:DET_0935 "endonuclease III" sp... 156 9.2e-10 1
TAIR|locus:2061345 - symbol:ATNTH1 species:3702 "Arabidop... 163 4.2e-09 1
TAIR|locus:2198738 - symbol:NTH2 "endonuclease III 2" spe... 159 1.2e-08 1
TIGR_CMR|CHY_1121 - symbol:CHY_1121 "endonuclease III" sp... 142 8.6e-08 1
FB|FBgn0032907 - symbol:CG9272 species:7227 "Drosophila m... 150 1.3e-07 1
ZFIN|ZDB-GENE-120511-4 - symbol:nthl1 "nth endonuclease I... 146 3.8e-07 1
UNIPROTKB|F1NQP6 - symbol:NTHL1 "Uncharacterized protein"... 137 1.1e-06 1
TIGR_CMR|BA_1570 - symbol:BA_1570 "endonuclease III" spec... 134 1.2e-06 1
UNIPROTKB|Q97QE0 - symbol:nth "Endonuclease III" species:... 131 2.4e-06 1
POMBASE|SPAC30D11.07 - symbol:nth1 "DNA endonuclease III"... 137 3.0e-06 1
DICTYBASE|DDB_G0277247 - symbol:apnB "putative endonuclea... 134 6.2e-06 1
WB|WBGene00011201 - symbol:nth-1 species:6239 "Caenorhabd... 131 9.4e-06 1
RGD|1309289 - symbol:Nthl1 "nth (endonuclease III)-like 1... 130 1.2e-05 1
TIGR_CMR|NSE_0246 - symbol:NSE_0246 "endonuclease III" sp... 125 1.6e-05 1
MGI|MGI:1313275 - symbol:Nthl1 "nth (endonuclease III)-li... 129 1.6e-05 1
TIGR_CMR|GSU_1450 - symbol:GSU_1450 "endonuclease III, pu... 124 2.2e-05 1
UNIPROTKB|Q2KID2 - symbol:NTHL1 "Endonuclease III-like pr... 126 3.6e-05 1
TIGR_CMR|CBU_1697 - symbol:CBU_1697 "endonuclease III" sp... 122 3.8e-05 1
TIGR_CMR|SO_2514 - symbol:SO_2514 "endonuclease III" spec... 119 0.00011 1
UNIPROTKB|P78549 - symbol:NTHL1 "Endonuclease III-like pr... 122 0.00011 1
UNIPROTKB|E2QX23 - symbol:NTHL1 "Uncharacterized protein"... 121 0.00014 1
TIGR_CMR|SPO_3581 - symbol:SPO_3581 "endonuclease III" sp... 116 0.00018 1
UNIPROTKB|F1RFB3 - symbol:NTHL1 "Uncharacterized protein"... 119 0.00023 1
>TAIR|locus:2135828 [details] [associations]
symbol:AT4G12740 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00278
SMART:SM00478 EMBL:CP002687 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AL049640 EMBL:AL161534 IPI:IPI00528123 PIR:T06632
RefSeq:NP_193010.2 UniGene:At.54294 ProteinModelPortal:F4JRF4
SMR:F4JRF4 PRIDE:F4JRF4 EnsemblPlants:AT4G12740.1 GeneID:826886
KEGG:ath:AT4G12740 GeneFarm:2854 TAIR:At4g12740 KO:K03575
OMA:FWKLAAQ Uniprot:F4JRF4
Length = 630
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 231/440 (52%), Positives = 297/440 (67%)
Query: 70 DIEDLFSEKEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAY--GVWVSEVMLQ 127
DIEDLFSE E +KIR LL WYD N+R+LPW + + + + +Q
Sbjct: 118 DIEDLFSENETQKIRMGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQ 177
Query: 128 QTRVQTVIDYYNRWMTKWP----TIHHL-AKASLE----------EVNEMWAGLGYYRRA 172
T ++ + +W T + ++ +L S E EVNEMWAGLGYYRRA
Sbjct: 178 -TVMKYYKRWMQKWPTIYDLGQASLENLIVSRSRELSFLRGNEKKEVNEMWAGLGYYRRA 236
Query: 173 RFLLEGAKMIVAEGDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLAR 232
RFLLEGAKM+VA +GFPN S L KV GIG YTAGAIASIAF E VPVVDGNVIRVLAR
Sbjct: 237 RFLLEGAKMVVAGTEGFPNQASSLMKVKGIGQYTAGAIASIAFNEAVPVVDGNVIRVLAR 296
Query: 233 LKAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDK 292
LKAISANPKD T +NFWKLA QLVD RPGDFNQSLMELGA +CT P+C+SCPVS +
Sbjct: 297 LKAISANPKDRLTARNFWKLAAQLVDPSRPGDFNQSLMELGATLCTVSKPSCSSCPVSSQ 356
Query: 293 CQAYSMSKRDNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKR 352
C+A+S+S+ + ++ VT YP KV+KA+ RHD CV+EI ER Q G F+LVKR
Sbjct: 357 CRAFSLSEENRTISVTDYPTKVIKAKPRHDFCCVCVLEI----HNLERNQSGGRFVLVKR 412
Query: 353 RDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKSF--NLDPRNNCSIILREDVGEFV 410
++GLLAGLWEFPS+IL+ E D TRR A +LK++F +++ + C+I+ RE++GEFV
Sbjct: 413 PEQGLLAGLWEFPSVILNEEADSATRRNAINVYLKEAFRFHVELKKACTIVSREELGEFV 472
Query: 411 HIFSHIRLKVHVELLVLCIKGGIDKWVEKQDKGTLSWKCVDGGTLASMGLTSGVRKVYTM 470
HIF+HIR KV+VELLV+ + GG + + Q K TL+WKCV L+++GLTS VRKV
Sbjct: 473 HIFTHIRRKVYVELLVVQLTGGTEDLFKGQAKDTLTWKCVSSDVLSTLGLTSAVRKVPPF 532
Query: 471 -VQKFKQKRLTTNSIPERKR 489
+Q K RL+ + + E+++
Sbjct: 533 RLQHIK--RLSLDVMVEKEQ 550
>MGI|MGI:1917853 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10090 "Mus
musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISO;TAS] [GO:0032407 "MutSalpha complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
MGI:MGI:1917853 GO:GO:0005739 GO:GO:0005634 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GO:GO:0019104 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q EMBL:AY007717 EMBL:AB117938 EMBL:AL683847
EMBL:BC057942 IPI:IPI00620073 RefSeq:NP_001153053.1
RefSeq:NP_573513.2 UniGene:Mm.180333 ProteinModelPortal:Q99P21
SMR:Q99P21 STRING:Q99P21 PhosphoSite:Q99P21 PRIDE:Q99P21
Ensembl:ENSMUST00000102699 GeneID:70603 KEGG:mmu:70603
GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743 InParanoid:A2AGE3
OMA:HLGEVVH NextBio:331956 Bgee:Q99P21 CleanEx:MM_MUTYH
Genevestigator:Q99P21 GermOnline:ENSMUSG00000028687 Uniprot:Q99P21
Length = 515
Score = 657 (236.3 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 128/231 (55%), Positives = 156/231 (67%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LFS+ +V R +LL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 57 LFSDVADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRR--AYAVWVSEVMLQQTQVA 114
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVIDYY RWM KWP + LA ASLEEVN++W+GLGYY R R L EGA+ +V E G P
Sbjct: 115 TVIDYYTRWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPR 174
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF +V VVDGNV+RVL R++AI A+P T + W
Sbjct: 175 TAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLW 234
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKR 301
LA QLVD RPGDFNQ+ MELGA +CTP P C+ CPV C+AY +R
Sbjct: 235 NLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQRVQR 285
Score = 163 (62.4 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 55/164 (33%), Positives = 81/164 (49%)
Query: 270 MELGAVICTPLNPNCTSCPVSDK-CQAY--SMSKRDNSVLVTSYPMKVLKARQRHDVSAA 326
++ G + P P+ C ++ + CQ S S D S+ V ++P K + R + SA
Sbjct: 283 VQRGQLSALPGRPDIEECALNTRQCQLCLTSSSPWDPSMGVANFPRKASRRPPREEYSAT 342
Query: 327 CVVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFL 386
CVVE G P + +LV+R D GLLAGLWEFPS+ L E +E
Sbjct: 343 CVVEQPGAIGG-----P--LVLLVQRPDSGLLAGLWEFPSVTL----------EPSEQHQ 385
Query: 387 KKSFNLDPRNNCSII--LR-EDVGEFVHIFSHIRLKVHVELLVL 427
K+ + + C + +R + +GE +HIFSHI+L V L L
Sbjct: 386 HKALLQELQRWCGPLPAIRLQHLGEVIHIFSHIKLTYQVYSLAL 429
>ZFIN|ZDB-GENE-081104-193 [details] [associations]
symbol:mutyh "mutY homolog (E. coli)" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-081104-193 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743
OMA:HLGEVVH EMBL:CT025742 IPI:IPI00900622 RefSeq:XP_686698.2
UniGene:Dr.74965 STRING:B8JJK1 Ensembl:ENSDART00000114177
GeneID:558403 KEGG:dre:558403 NextBio:20882452 Uniprot:B8JJK1
Length = 526
Score = 633 (227.9 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 120/232 (51%), Positives = 155/232 (66%)
Query: 68 EEDIEDLFSEK-EVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVML 126
E + +F + E+ R L++WYD+N+RELPW Y VWVSE+ML
Sbjct: 43 EPSLYHIFHDPTEISVFRSDLMKWYDENKRELPWRTLATTEQDDNIRT--YAVWVSEIML 100
Query: 127 QQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEG 186
QQT+V TVIDYYNRWM +WPT+ LA A+LEEVN+MW+GLGYY R R L EGA+ +V+E
Sbjct: 101 QQTQVATVIDYYNRWMKRWPTVEKLAAATLEEVNQMWSGLGYYSRGRRLHEGAQKVVSEL 160
Query: 187 DG-FPNTVSDLRK-VPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTS 244
DG P T + L K +PG+G YTAGAI SIA +V VDGNVIRVL R++AI A+ +
Sbjct: 161 DGQMPKTTAGLLKQLPGVGRYTAGAIGSIALGQVTGAVDGNVIRVLCRVRAIGADSSSPA 220
Query: 245 TVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAY 296
W++A LVD RPGDFNQ++MELGA +CTP +P C+ CP+ C A+
Sbjct: 221 VTDALWRIADALVDPERPGDFNQAMMELGARVCTPKSPVCSQCPIQTHCHAF 272
Score = 185 (70.2 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 59/228 (25%), Positives = 101/228 (44%)
Query: 272 LGAVICTPLNP--NCTSCPVSDKCQAYSMSKRDNSVLVTSYPMKVLKARQRHDVSAACVV 329
L + P NP + +C + C D + V +YP K +K R + + C+V
Sbjct: 287 LNKLATNPKNPVPDIENCMSAGSCNLCLSEDWDPQLGVQNYPRKPVKKAPRVEQTLTCIV 346
Query: 330 EILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKS 389
E +ESE ++L +R +GLLAG+WE PS++L + +E C + +
Sbjct: 347 EHQRAGEESE-------YLLTQRPSKGLLAGMWELPSVLLQADISENKYKELI-CDMMQK 398
Query: 390 FNLDPRNNCSIILREDVGEFVHIFSHIRLKVHVELLVLCIKGGIDKWVEKQDKGTLSWKC 449
+ P + S+ + VGE VHIFSHI H +V + + +++ K W
Sbjct: 399 WLETPLDTHSV---QFVGEVVHIFSHI----HQTYIVFSVH--VSDCSDREQKQKTCW-- 447
Query: 450 VDGGTLASMGLTSGVRKV---YTMVQKFKQKRLTTNSIPERKRTNTKR 494
+ L +++GV+K+ Y K K + PE++ K+
Sbjct: 448 LTKSALQKAAVSTGVKKIMKLYESSSKLDLKGKKRKAGPEKQSNKIKK 495
>UNIPROTKB|E2RG99 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104
GeneTree:ENSGT00510000047220 OMA:HLGEVVH TIGRFAMs:TIGR01084
EMBL:AAEX03009783 Ensembl:ENSCAFT00000007437 Uniprot:E2RG99
Length = 636
Score = 661 (237.7 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 130/241 (53%), Positives = 163/241 (67%)
Query: 74 LFSEK-EVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R++LL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 172 LFRDTAEVMAFRENLLNWYDREKRDLPWRRLAEGEVDLDRR--AYAVWVSEVMLQQTQVA 229
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVIDYY RWM KWPT+ LA ASLEEVN++WAGLGYY R R L +GA+ +V E G P+
Sbjct: 230 TVIDYYTRWMQKWPTLQDLAGASLEEVNQLWAGLGYYSRGRRLQQGARKVVEELGGHVPH 289
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF + VVDGNVIRVL R++AI A+ T ++ W
Sbjct: 290 TAETLQRLLPGVGRYTAGAIASIAFGQATGVVDGNVIRVLCRVRAIGADSSSTLVSQHLW 349
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSY 310
LA QLVD RPGDFNQ+ MELGA++CTP +P+C+ CPV C+AY +R + S
Sbjct: 350 GLAQQLVDPARPGDFNQAAMELGALVCTPQHPHCSQCPVRSLCRAYQKVERGKLLASQSL 409
Query: 311 P 311
P
Sbjct: 410 P 410
Score = 150 (57.9 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 53/155 (34%), Positives = 75/155 (48%)
Query: 279 PLNPNCTSCPVSDK-CQ--AYSMSKRDNSVLVTSYPMKVLKARQRHDVSAACVVE---IL 332
P +P+ C S + CQ A+ D ++ VT++P K + R + SA CV+E L
Sbjct: 410 PGSPDVEECASSTELCQLCAHPTEPWDQTLGVTNFPRKASRKPPREECSAICVLEQPRAL 469
Query: 333 GGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNL 392
GG P +LV+R GLLAGLWEFPS+ E +REA L+
Sbjct: 470 GG--------PQ--ILLVQRPSSGLLAGLWEFPSVT--AEASGRCQREALLQELQSWAGP 517
Query: 393 DPRNNCSIILREDVGEFVHIFSHIRLKVHVELLVL 427
P ++ + +G+ VH FSHI+L V L L
Sbjct: 518 LPASHL-----QHLGQVVHTFSHIKLTYQVYGLAL 547
>UNIPROTKB|E1BZT8 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00595820
ProteinModelPortal:E1BZT8 Ensembl:ENSGALT00000016624 Uniprot:E1BZT8
Length = 461
Score = 647 (232.8 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 124/232 (53%), Positives = 157/232 (67%)
Query: 74 LFSEK-EVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + E+ +R LL WYDK++R+LPW AY VWVSE+MLQQT+V
Sbjct: 48 LFGDPVEIDALRGRLLAWYDKSRRDLPWRTLAAAELDADRR--AYAVWVSEIMLQQTQVA 105
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPN 191
TVIDYYNRWM KWPT+ LA ASLEEVNE+WAGLGYY R + L E A+ +V+E G P
Sbjct: 106 TVIDYYNRWMQKWPTLQALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPR 165
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T DL+++ PG+G YTAGAIASI+F + VVDGNVIRVL RL+ I A+ + + W
Sbjct: 166 TAEDLQRLLPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLW 225
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRD 302
+A LVD RPGDFNQ+LMELGA +CTP +P C CPV + C A+ +++
Sbjct: 226 DMANTLVDRSRPGDFNQALMELGATVCTPKSPLCRECPVKEHCHAWRRVEKE 277
Score = 156 (60.0 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 45/132 (34%), Positives = 70/132 (53%)
Query: 302 DNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGL 361
D+S+ VT++P K K + R + +A CV+E G E +++V+R GLLAGL
Sbjct: 314 DSSLGVTNFPRKAAKKQPRVEWTATCVLERRGRLGAPE-------YLIVQRPSSGLLAGL 366
Query: 362 WEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSHIRLKVH 421
WEFPS+ L ++E L+ ++ P S+ +GE VHIFSHI + +
Sbjct: 367 WEFPSLPLAPGLQEEQQKEVLADHLR-AWTRQPVQTQSLCF---IGEVVHIFSHIH-QTY 421
Query: 422 VELLVLCIKGGI 433
V + LC+ G +
Sbjct: 422 V-VYSLCLDGDV 432
>UNIPROTKB|F1P514 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00821549
Ensembl:ENSGALT00000038451 Uniprot:F1P514
Length = 398
Score = 647 (232.8 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 124/232 (53%), Positives = 157/232 (67%)
Query: 74 LFSEK-EVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + E+ +R LL WYDK++R+LPW AY VWVSE+MLQQT+V
Sbjct: 2 LFGDPVEIDALRGRLLAWYDKSRRDLPWRTLAAAELDADRR--AYAVWVSEIMLQQTQVA 59
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPN 191
TVIDYYNRWM KWPT+ LA ASLEEVNE+WAGLGYY R + L E A+ +V+E G P
Sbjct: 60 TVIDYYNRWMQKWPTLQALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPR 119
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T DL+++ PG+G YTAGAIASI+F + VVDGNVIRVL RL+ I A+ + + W
Sbjct: 120 TAEDLQRLLPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLW 179
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRD 302
+A LVD RPGDFNQ+LMELGA +CTP +P C CPV + C A+ +++
Sbjct: 180 DMANTLVDRSRPGDFNQALMELGATVCTPKSPLCRECPVKEHCHAWRRVEKE 231
Score = 156 (60.0 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 45/132 (34%), Positives = 70/132 (53%)
Query: 302 DNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGL 361
D+S+ VT++P K K + R + +A CV+E G E +++V+R GLLAGL
Sbjct: 268 DSSLGVTNFPRKAAKKQPRVEWTATCVLERRGRLGAPE-------YLIVQRPSSGLLAGL 320
Query: 362 WEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSHIRLKVH 421
WEFPS+ L ++E L+ ++ P S+ +GE VHIFSHI + +
Sbjct: 321 WEFPSLPLAPGLQEEQQKEVLADHLR-AWTRQPVQTQSLCF---IGEVVHIFSHIH-QTY 375
Query: 422 VELLVLCIKGGI 433
V + LC+ G +
Sbjct: 376 V-VYSLCLDGDV 386
>UNIPROTKB|E5KP25 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005634 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 EMBL:AL359540 KO:K03575 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 IPI:IPI00414236 RefSeq:NP_001121897.1
UniGene:Hs.271353 GeneID:4595 KEGG:hsa:4595 CTD:4595 HGNC:HGNC:7527
GenomeRNAi:4595 NextBio:17664 OMA:HLGEVVH SMR:E5KP25
Ensembl:ENST00000450313 UCSC:uc009vxp.3 Uniprot:E5KP25
Length = 549
Score = 634 (228.2 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 126/225 (56%), Positives = 150/225 (66%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R SLL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 86 LFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRR--AYAVWVSEVMLQQTQVA 143
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY WM KWPT+ LA ASLEEVN++WAGLGYY R R L EGA+ +V E G P
Sbjct: 144 TVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPR 203
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF + VVDGNV RVL R++AI A+P T + W
Sbjct: 204 TAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLW 263
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
LA QLVD RPGDFNQ+ MELGA +CTP P C+ CPV C+A
Sbjct: 264 GLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 308
Score = 133 (51.9 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 281 NPNCTSC-PVSDKCQAYSMSKR--DNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDE 337
+P+ C P + +C D ++ V ++P K + R + SA CV+E G
Sbjct: 326 SPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGA 385
Query: 338 SERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNN 397
+LV+R + GLLAGLWEFPS+ + + +R+A L++ P +
Sbjct: 386 Q--------ILLVQRPNSGLLAGLWEFPSVTWEPSEQL--QRKALLQELQRWAGPLPATH 435
Query: 398 CSIILREDVGEFVHIFSHIRLKVHVELLVL 427
LR +GE VH FSHI+L V L L
Sbjct: 436 ----LRH-LGEVVHTFSHIKLTYQVYGLAL 460
>UNIPROTKB|Q9UIF7 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=TAS] [GO:0032405 "MutLalpha complex binding"
evidence=IDA] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0032408 "MutSbeta complex binding" evidence=IDA] [GO:0032406
"MutLbeta complex binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006284 "base-excision
repair" evidence=TAS] [GO:0006285 "base-excision repair, AP site
formation" evidence=TAS] [GO:0045007 "depurination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_216
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0045007 EMBL:CH471059 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0006298 GO:GO:0004519 MIM:613659 GO:GO:0016798
GO:GO:0032407 Orphanet:26106 EMBL:AL359540 KO:K03575 EMBL:U63329
EMBL:AB032920 EMBL:AB032921 EMBL:AB032922 EMBL:AB032923
EMBL:AB032924 EMBL:AB032925 EMBL:AB032926 EMBL:AB032927
EMBL:AB032928 EMBL:AB032929 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 EMBL:AF527839 EMBL:BC003178
IPI:IPI00414235 IPI:IPI00414236 IPI:IPI00414237 IPI:IPI00456700
IPI:IPI00746950 IPI:IPI00844241 RefSeq:NP_001041636.1
RefSeq:NP_001041637.1 RefSeq:NP_001041638.1 RefSeq:NP_001041639.1
RefSeq:NP_001121897.1 RefSeq:NP_036354.1 UniGene:Hs.271353 PDB:1X51
PDB:3N5N PDBsum:1X51 PDBsum:3N5N ProteinModelPortal:Q9UIF7
SMR:Q9UIF7 DIP:DIP-41972N IntAct:Q9UIF7 STRING:Q9UIF7
PhosphoSite:Q9UIF7 DMDM:48428272 PRIDE:Q9UIF7
Ensembl:ENST00000354383 Ensembl:ENST00000355498
Ensembl:ENST00000372098 Ensembl:ENST00000372100
Ensembl:ENST00000372104 Ensembl:ENST00000372110
Ensembl:ENST00000372115 Ensembl:ENST00000448481
Ensembl:ENST00000456914 GeneID:4595 KEGG:hsa:4595 UCSC:uc001cnf.3
UCSC:uc001cng.3 UCSC:uc001cnn.3 CTD:4595 GeneCards:GC01M045794
HGNC:HGNC:7527 HPA:HPA008732 MIM:604933 MIM:608456
neXtProt:NX_Q9UIF7 Orphanet:733 Orphanet:247798 PharmGKB:PA31328
eggNOG:COG1194 HOVERGEN:HBG052540 InParanoid:Q9UIF7
OrthoDB:EOG4HX50Q EvolutionaryTrace:Q9UIF7 GenomeRNAi:4595
NextBio:17664 ArrayExpress:Q9UIF7 Bgee:Q9UIF7 CleanEx:HS_MUTYH
Genevestigator:Q9UIF7 GermOnline:ENSG00000132781 Uniprot:Q9UIF7
Length = 546
Score = 634 (228.2 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 126/225 (56%), Positives = 150/225 (66%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R SLL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 83 LFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRR--AYAVWVSEVMLQQTQVA 140
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY WM KWPT+ LA ASLEEVN++WAGLGYY R R L EGA+ +V E G P
Sbjct: 141 TVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPR 200
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF + VVDGNV RVL R++AI A+P T + W
Sbjct: 201 TAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLW 260
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
LA QLVD RPGDFNQ+ MELGA +CTP P C+ CPV C+A
Sbjct: 261 GLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 305
Score = 133 (51.9 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 281 NPNCTSC-PVSDKCQAYSMSKR--DNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDE 337
+P+ C P + +C D ++ V ++P K + R + SA CV+E G
Sbjct: 323 SPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGA 382
Query: 338 SERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNN 397
+LV+R + GLLAGLWEFPS+ + + +R+A L++ P +
Sbjct: 383 Q--------ILLVQRPNSGLLAGLWEFPSVTWEPSEQL--QRKALLQELQRWAGPLPATH 432
Query: 398 CSIILREDVGEFVHIFSHIRLKVHVELLVL 427
LR +GE VH FSHI+L V L L
Sbjct: 433 ----LRH-LGEVVHTFSHIKLTYQVYGLAL 457
>DICTYBASE|DDB_G0270764 [details] [associations]
symbol:myh "monofunctional DNA glycosylase"
species:44689 "Dictyostelium discoideum" [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 SMART:SM00525
dictyBase:DDB_G0270764 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0006298
GO:GO:0004519 KO:K03575 eggNOG:COG1194 RefSeq:XP_001134477.1
ProteinModelPortal:Q1ZXP7 STRING:Q1ZXP7 EnsemblProtists:DDB0232996
GeneID:8617615 KEGG:ddi:DDB_G0270764 InParanoid:Q1ZXP7 OMA:RSIGANP
ProtClustDB:CLSZ2847450 Uniprot:Q1ZXP7
Length = 574
Score = 645 (232.1 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 122/228 (53%), Positives = 166/228 (72%)
Query: 76 SEKEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVI 135
+++E+++IR+S+L WY+KN+R+LPW AY VWVSE+MLQQTRV TVI
Sbjct: 92 NKQEIQEIRESMLGWYEKNKRDLPWRKHDNSLDENVI---AYRVWVSEIMLQQTRVATVI 148
Query: 136 DYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPNTVS 194
+Y+N+W+ KWPTI+ LA ++EEVN++W+GLGYYRRA+ L G+K +V + P+ V
Sbjct: 149 EYFNKWIEKWPTINDLASTTIEEVNKVWSGLGYYRRAKNLWLGSKYVVDNFNSKIPSDVK 208
Query: 195 DLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLAT 254
L ++ GIG YTAGAI+SIAF + VP+VDGNVIRVL+R+++I ANPK +STVK FW+L
Sbjct: 209 SLLEINGIGPYTAGAISSIAFNKPVPLVDGNVIRVLSRVRSIGANPKLSSTVKLFWELGN 268
Query: 255 QLVDSCR-PGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKR 301
LV+S P +FNQSLMELGA IC+ +P C CP+ CQAY K+
Sbjct: 269 DLVESVENPCNFNQSLMELGATICSVQSPQCKQCPIQSNCQAYQQEKQ 316
Score = 79 (32.9 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 293 CQAYSMSKRDNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKR 352
CQ++ S V YP KVLK + R + ++ N +F+L +R
Sbjct: 363 CQSFEDSDGPTES-VCRYPKKVLKTKARDENVNVFLIHQTKSN----------LFLLTQR 411
Query: 353 RDEGLLAGLWEFPSII 368
D GLLA L+E PSII
Sbjct: 412 PDTGLLASLFEAPSII 427
Score = 39 (18.8 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 373 TDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSHI 416
T+ T+ + LKK F + +I + +G +H FSHI
Sbjct: 479 TNKITKEFIEKEILKKLFKSS--TDITIKSVKSIGTVLHKFSHI 520
>RGD|620045 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005739
"mitochondrion" evidence=IEA;ISO;IDA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0032407 "MutSalpha complex binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0032405 "MutLalpha complex binding" evidence=ISO] [GO:0032406
"MutLbeta complex binding" evidence=ISO] [GO:0032408 "MutSbeta
complex binding" evidence=ISO] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
RGD:620045 GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 127/226 (56%), Positives = 155/226 (68%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LFS+ +V R++LL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 57 LFSDIADVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRR--AYAVWVSEVMLQQTQVA 114
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVIDYY RWM KWPT+ LA ASLEEVN++W+GLGYY R R L EGA+ +V E G P
Sbjct: 115 TVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPR 174
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF +V VVDGNVIRVL R++AI A+P + + W
Sbjct: 175 TAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLW 234
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAY 296
LA QLVD RPGDFNQ+ MELGA +CTP P C CPV C+A+
Sbjct: 235 DLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAH 280
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 71/287 (24%), Positives = 127/287 (44%)
Query: 150 HLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDGFPNTVSDLRKVPGIG-----N 204
H+ + + E + ++ G+G Y + DG N + L +V IG +
Sbjct: 171 HVPRTA-ETLQQLLPGVGRYTAGAIASIAFDQVTGVVDG--NVIRVLCRVRAIGADPTSS 227
Query: 205 YTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGD 264
+ + + +A + V P G+ + L A P+ + N + + CR
Sbjct: 228 FVSHHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQ--RPLCNHCPVQSL----CRA-- 279
Query: 265 FNQSLMELGAVICTPLNPNCTSCPVSDK-CQAY--SMSKRDNSVLVTSYPMKVLKARQRH 321
+Q + + G + P +P+ C ++ + CQ S + D ++ V ++P K + R
Sbjct: 280 -HQRVGQ-GRLSALPGSPDIEECALNTRQCQLCLPSTNPWDPNMGVVNFPRKASRRPPRE 337
Query: 322 DVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREA 381
+ SA CVVE G P + +LV+R + GLLAGLWEFPS+ L+ + +
Sbjct: 338 EYSATCVVEQPGATGG-----P--LILLVQRPNSGLLAGLWEFPSVTLE-----PSGQHQ 385
Query: 382 AECFLKKSFNLD-PRNNCSIILREDVGEFVHIFSHIRLKVHVELLVL 427
+ L++ + P + + +GE +H+FSHI+L V L L
Sbjct: 386 HKALLQELQHWSAPLPTTPL---QHLGEVIHVFSHIKLTYQVYSLAL 429
>UNIPROTKB|Q8R5G2 [details] [associations]
symbol:Mutyh "A/G-specific adenine DNA glycosylase"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 RGD:620045
GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 127/226 (56%), Positives = 155/226 (68%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LFS+ +V R++LL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 57 LFSDIADVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRR--AYAVWVSEVMLQQTQVA 114
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVIDYY RWM KWPT+ LA ASLEEVN++W+GLGYY R R L EGA+ +V E G P
Sbjct: 115 TVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPR 174
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF +V VVDGNVIRVL R++AI A+P + + W
Sbjct: 175 TAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLW 234
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAY 296
LA QLVD RPGDFNQ+ MELGA +CTP P C CPV C+A+
Sbjct: 235 DLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAH 280
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 71/287 (24%), Positives = 127/287 (44%)
Query: 150 HLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDGFPNTVSDLRKVPGIG-----N 204
H+ + + E + ++ G+G Y + DG N + L +V IG +
Sbjct: 171 HVPRTA-ETLQQLLPGVGRYTAGAIASIAFDQVTGVVDG--NVIRVLCRVRAIGADPTSS 227
Query: 205 YTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGD 264
+ + + +A + V P G+ + L A P+ + N + + CR
Sbjct: 228 FVSHHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQ--RPLCNHCPVQSL----CRA-- 279
Query: 265 FNQSLMELGAVICTPLNPNCTSCPVSDK-CQAY--SMSKRDNSVLVTSYPMKVLKARQRH 321
+Q + + G + P +P+ C ++ + CQ S + D ++ V ++P K + R
Sbjct: 280 -HQRVGQ-GRLSALPGSPDIEECALNTRQCQLCLPSTNPWDPNMGVVNFPRKASRRPPRE 337
Query: 322 DVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREA 381
+ SA CVVE G P + +LV+R + GLLAGLWEFPS+ L+ + +
Sbjct: 338 EYSATCVVEQPGATGG-----P--LILLVQRPNSGLLAGLWEFPSVTLE-----PSGQHQ 385
Query: 382 AECFLKKSFNLD-PRNNCSIILREDVGEFVHIFSHIRLKVHVELLVL 427
+ L++ + P + + +GE +H+FSHI+L V L L
Sbjct: 386 HKALLQELQHWSAPLPTTPL---QHLGEVIHVFSHIKLTYQVYSLAL 429
>UNIPROTKB|F1S368 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00293 Pfam:PF00730 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:CU657926
Ensembl:ENSSSCT00000004334 Uniprot:F1S368
Length = 524
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 126/241 (52%), Positives = 158/241 (65%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R+SLL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 60 LFRDVAEVTAFRKSLLSWYDREKRDLPWRRLAESEVDPDRR--AYAVWVSEVMLQQTQVA 117
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY RWM WPT+ LA ASLEEVN++WAGLGYY R R+L GA+ +V E G P
Sbjct: 118 TVINYYTRWMQTWPTLRDLASASLEEVNQLWAGLGYYSRGRWLQTGARKVVEELGGHMPR 177
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF + V+ GNV RVL R++AI A+P+ T + W
Sbjct: 178 TAETLQRLLPGVGRYTAGAIASIAFGQAAGVMYGNVFRVLCRVRAIGADPRSTLVSQQLW 237
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSY 310
LA QLVD RPGDFNQ+ MELGA +CTP +P C+ CPV C+A+ +R+ S
Sbjct: 238 SLAQQLVDPARPGDFNQAAMELGATVCTPQHPLCSQCPVQSLCRAHQRVEREQLSAFQSL 297
Query: 311 P 311
P
Sbjct: 298 P 298
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 49/160 (30%), Positives = 71/160 (44%)
Query: 271 ELGAVICTPLNPNCTSC-PVSDKCQ--AYSMSKRDNSVLVTSYPMKVLKARQRHDVSAAC 327
+L A P + +C P + +CQ A D ++ V ++P K + R + SA C
Sbjct: 290 QLSAFQSLPGTCDIEACAPNTGQCQLCAPPTEPWDKTLGVANFPRKANRKPPREESSAIC 349
Query: 328 VVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLK 387
V+E R +LV+R + GLLAGLWEFPS+ + + E L+
Sbjct: 350 VLE-------QPRAFGGARLLLVQRPNSGLLAGLWEFPSVAAEPSEQLQCTALLQE--LQ 400
Query: 388 KSFNLDPRNNCSIILREDVGEFVHIFSHIRLKVHVELLVL 427
P + +GE VH FSHI+L HV L L
Sbjct: 401 NWVGPLPATRL-----QHLGEVVHSFSHIKLTYHVYGLAL 435
>UNIPROTKB|Q5T413 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519 EMBL:AL359540
UniGene:Hs.271353 HGNC:HGNC:7527 HOVERGEN:HBG052540
HOGENOM:HOG000028743 IPI:IPI00975588 SMR:Q5T413 STRING:Q5T413
Ensembl:ENST00000435155 Uniprot:Q5T413
Length = 291
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 126/225 (56%), Positives = 150/225 (66%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R SLL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 69 LFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRR--AYAVWVSEVMLQQTQVA 126
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY WM KWPT+ LA ASLEEVN++WAGLGYY R R L EGA+ +V E G P
Sbjct: 127 TVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPR 186
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L+++ PG+G YTAGAIASIAF + VVDGNV RVL R++AI A+P T + W
Sbjct: 187 TAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLW 246
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
LA QLVD RPGDFNQ+ MELGA +CTP P C+ CPV C+A
Sbjct: 247 GLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 291
>UNIPROTKB|F1N4K4 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:DAAA02009006
IPI:IPI00703676 UniGene:Bt.38838 Ensembl:ENSBTAT00000014928
NextBio:20870678 Uniprot:F1N4K4
Length = 526
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 125/241 (51%), Positives = 160/241 (66%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV +++SLL WYD+ +R+LPW AY V ++VMLQQT+V
Sbjct: 60 LFRDVAEVTALQESLLDWYDRKKRDLPWRRLVEDEVDLDRR--AYAVCFTDVMLQQTQVA 117
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY RWM KWPT+ LA ASLEEVN++WAGLGYY R R+L EGA+ +V E G P
Sbjct: 118 TVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRWLQEGARKVVEELGGHMPR 177
Query: 192 TVSDLRK-VPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFW 250
T L++ +PG+G YTAGAIASIAF + VVDGNVIRVL R++AI A+ T ++ W
Sbjct: 178 TAETLQQFLPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLCRVRAIGADSSSTLVSQHLW 237
Query: 251 KLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSY 310
LA QLVD RPGDFNQ+ MELGA++CTP P C+ CPV + C+A +R+ S
Sbjct: 238 SLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCRARQRVEREQLSASQSL 297
Query: 311 P 311
P
Sbjct: 298 P 298
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 78/287 (27%), Positives = 123/287 (42%)
Query: 150 HLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDGFPNTVSDLRKVPGIGNYTAGA 209
H+ + + E + + G+G Y DG N + L +V IG ++
Sbjct: 174 HMPRTA-ETLQQFLPGVGRYTAGAIASIAFGQAAGVVDG--NVIRVLCRVRAIGADSSST 230
Query: 210 IAS-----IAFKEVVPVVDGNVIRVLARLKAISANPK----DTSTVKNFWKLATQLVDSC 260
+ S +A + V P G+ + L AI PK V+N + A Q V+
Sbjct: 231 LVSQHLWSLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCR-ARQRVER- 288
Query: 261 RPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSYPMKVLKARQR 320
+QSL G PN CP+ C A D ++ VT++P K + R
Sbjct: 289 EQLSASQSLP--GNCDVEECAPNTGQCPL---C-APPTEPWDQTLGVTNFPRKASRKPPR 342
Query: 321 HDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRRE 380
+ SA CV+E + +LV+R + GLLAGLWEFPS+ ++ E +R
Sbjct: 343 EECSAICVLE-------QPKALGGAHILLVQRPNSGLLAGLWEFPSVSVNAEASGQHQRA 395
Query: 381 AAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSHIRLKVHVELLVL 427
A L+ S+ + P + + + +G+ VH FSHI++ V L L
Sbjct: 396 ALLQELQ-SW-VGPLPDTRL---QHLGQVVHTFSHIKMTYQVYSLAL 437
>POMBASE|SPAC26A3.02 [details] [associations]
symbol:myh1 "adenine DNA glycosylase Myh1" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0000701 "purine-specific mismatch base pair DNA
N-glycosylase activity" evidence=IMP] [GO:0000702 "oxidized base
lesion DNA N-glycosylase activity" evidence=TAS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006281 "DNA repair"
evidence=IC] [GO:0006284 "base-excision repair" evidence=IC]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISM] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478
SMART:SM00525 PomBase:SPAC26A3.02 GO:GO:0005634 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0034644 GO:GO:0004519 KO:K03575 eggNOG:COG1194
EMBL:AF053340 PIR:T38390 PIR:T43679 RefSeq:NP_594145.1
ProteinModelPortal:Q10159 IntAct:Q10159 MINT:MINT-1209697
STRING:Q10159 EnsemblFungi:SPAC26A3.02.1 GeneID:2542727
KEGG:spo:SPAC26A3.02 OMA:MVRAFKE OrthoDB:EOG4HDX3M NextBio:20803772
GO:GO:0000702 GO:GO:0000701 Uniprot:Q10159
Length = 461
Score = 481 (174.4 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 102/245 (41%), Positives = 145/245 (59%)
Query: 75 FSEKEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXX--------XXXAYGVWVSEVML 126
+++ EV++ R+SL+Q+YDK +R LPW Y V VSE+ML
Sbjct: 13 YTQLEVERFRESLIQFYDKTKRILPWRKKECIPPSEDSPLEDWEQPVQRLYEVLVSEIML 72
Query: 127 QQTRVQTVIDYYNRWMTKWPTIHHLAKASLE-EVNEMWAGLGYYRRARFLLEGAKMIVA- 184
QQTRV+TV YY +WM PT+ A+A +V +W+G+G+Y R + L + + +
Sbjct: 73 QQTRVETVKRYYTKWMETLPTLKSCAEAEYNTQVMPLWSGMGFYTRCKRLHQACQHLAKL 132
Query: 185 EGDGFPNTVSDLRK-VPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDT 243
P T + K +PG+G YTAGA+ SIA+K+ +VDGNVIRVL+R AI ++
Sbjct: 133 HPSEIPRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGIVDGNVIRVLSRALAIHSDCSKG 192
Query: 244 STVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSK--R 301
WKLA +LVD RPGDFNQ+LMELGA+ CTP +P C+ CP+S+ C+AY R
Sbjct: 193 KANALIWKLANELVDPVRPGDFNQALMELGAITCTPQSPRCSVCPISEICKAYQEQNVIR 252
Query: 302 DNSVL 306
D + +
Sbjct: 253 DGNTI 257
Score = 143 (55.4 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 60/188 (31%), Positives = 88/188 (46%)
Query: 299 SKRD-NSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGL 357
SK D + +V YP+ K +QR + A VV I D S + + F++ KR GL
Sbjct: 275 SKEDLQNWVVARYPVHPAKTKQREE--RALVV-IFQKTDPSTKEK---FFLIRKRPSAGL 328
Query: 358 LAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILR-EDVGEFVHIFSHI 416
LAGLW+FP+I E+ + AE F K ++ S+I + + G ++HIFSHI
Sbjct: 329 LAGLWDFPTIEFGQES--WPKDMDAE-FQKSIAQWISNDSRSLIKKYQSRGRYLHIFSHI 385
Query: 417 RLKVHVELLVLC--IKGGIDK-WVEKQDKGTLSWKCVDGGTLASMGLTSGVRKVYTMVQK 473
R HV + I D W+ + D + C G L RKV T +
Sbjct: 386 RKTSHVFYAIASPDIVTNEDFFWISQSDLEHVGM-CELGLKNYRAALEIKKRKV-TSLSN 443
Query: 474 FKQKRLTT 481
FK+ +LT+
Sbjct: 444 FKEPKLTS 451
>TIGR_CMR|CBU_0940 [details] [associations]
symbol:CBU_0940 "A/G-specific adenine glycosylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519 GO:GO:0019104
KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 OMA:FHLDIQP
HSSP:P17802 RefSeq:NP_819952.1 ProteinModelPortal:Q83D07 SMR:Q83D07
GeneID:1208834 KEGG:cbu:CBU_0940 PATRIC:17930589
ProtClustDB:CLSK914429 BioCyc:CBUR227377:GJ7S-932-MONOMER
Uniprot:Q83D07
Length = 354
Score = 448 (162.8 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 98/269 (36%), Positives = 149/269 (55%)
Query: 81 KKIRQSLLQWYDKNQR-ELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYN 139
K+ Q +L+W+D+ R +LPW Y VWVSE+MLQQT+V TVI Y+
Sbjct: 4 KQFAQGVLRWFDRYGRHDLPWQKKLT----------PYRVWVSEIMLQQTQVSTVIPYFE 53
Query: 140 RWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPNTVSDLRK 198
R++ ++PT+ LA A L+E+ W+GLGYY RAR L A++I G FP+TV L
Sbjct: 54 RFIKRFPTVGALALAPLDEILAHWSGLGYYARARNLHRAAQIIHVTYHGRFPSTVETLSS 113
Query: 199 VPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVD 258
+PGIG TAGA+ S+ + ++DGNV RVLAR A+ + W LA +
Sbjct: 114 LPGIGRSTAGAVLSLGMHQYAVILDGNVKRVLARYNALDVPINQQVGINILWSLAEKYTP 173
Query: 259 SCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSYPMKVLKAR 318
R D+NQ++M++GA+ICT P C+ CP+ C+A+ +S++ N +P+K K
Sbjct: 174 KNRCWDYNQAMMDIGAMICTRTKPKCSLCPLKSSCKAHRLSQQMN------FPIKKAKTA 227
Query: 319 QRHDVSAACVVEILGGNDESERTQPDGVF 347
+ + ++ G E+ P G++
Sbjct: 228 RAQKAAYLLLLRNSRGEILLEKRPPTGIW 256
Score = 59 (25.8 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 345 GVFILVKRRDEGLLAGLWEFPSIILDGETD 374
G +L KR G+ GLW FP ++ + D
Sbjct: 243 GEILLEKRPPTGIWGGLWSFPQCPIEEDID 272
>TIGR_CMR|SPO_3448 [details] [associations]
symbol:SPO_3448 "A/G-specific adenine glycosylase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004844 "uracil DNA
N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104 KO:K03575
HOGENOM:HOG000028743 TIGRFAMs:TIGR01084 RefSeq:YP_168644.1
ProteinModelPortal:Q5LMW4 GeneID:3195498 KEGG:sil:SPO3448
PATRIC:23380357 OMA:QAVKPYF ProtClustDB:CLSK934171 Uniprot:Q5LMW4
Length = 351
Score = 434 (157.8 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 96/211 (45%), Positives = 122/211 (57%)
Query: 86 SLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYNRWMTKW 145
+LL WYD++ RE+PW Y VW+SEVMLQQT V V DY++R+ +W
Sbjct: 12 ALLDWYDRHAREMPWRVGPTDRAAGVRPD-PYRVWLSEVMLQQTTVAAVRDYFHRFTARW 70
Query: 146 PTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGN 204
PT+ LA A E V WAGLGYY RAR LL+ A+ + E G FP++ L +PGIG
Sbjct: 71 PTVAALAAAPDEAVMGEWAGLGYYARARNLLKCARAVSEEHGGQFPDSYEGLIALPGIGP 130
Query: 205 YTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGD 264
YTA AIA+IAF V+DGNV RV+ARL + V + A L + RPGD
Sbjct: 131 YTAAAIAAIAFDRAETVLDGNVERVMARLYDVQEPLPGVKPVLK--EHAAALTPTARPGD 188
Query: 265 FNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
Q++M+LGA ICTP P C CP+ C A
Sbjct: 189 HAQAVMDLGATICTPRAPACGICPLRAPCLA 219
Score = 55 (24.4 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 344 DGVFILVKRRDEGLLAGLWEFP 365
DG ++L +R D+GLL G+ +P
Sbjct: 251 DGAWLLERRPDKGLLGGMLGWP 272
>TIGR_CMR|CPS_4148 [details] [associations]
symbol:CPS_4148 "A/G-specific adenine glycosylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 RefSeq:YP_270802.1
ProteinModelPortal:Q47WM0 SMR:Q47WM0 STRING:Q47WM0 GeneID:3522464
KEGG:cps:CPS_4148 PATRIC:21471157 OMA:LPWRETY
BioCyc:CPSY167879:GI48-4160-MONOMER Uniprot:Q47WM0
Length = 362
Score = 432 (157.1 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 104/296 (35%), Positives = 157/296 (53%)
Query: 74 LFSEKEVKKIRQSLLQWYD-KNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
+ S K ++ Q ++ WY + ++ LPW Y VW+SE+MLQQT+V
Sbjct: 6 VISAKSAEQFGQQVVSWYHLQGRKHLPWQQDKT----------PYRVWISEIMLQQTQVA 55
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPN 191
TVI YY R+M +PTI LA A + V W GLGYY RAR L + AK+++ + DG FP
Sbjct: 56 TVIPYYQRFMESFPTITDLANADEDVVLHHWTGLGYYARARNLHKSAKIMLNDYDGHFPI 115
Query: 192 TVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWK 251
+ + +PGIG TAGAI S++ K+ P++DGNV RVLAR + + K W+
Sbjct: 116 EIEQVIALPGIGRSTAGAILSLSLKQYHPILDGNVKRVLARSYLVEGYNGLSKFDKALWQ 175
Query: 252 LATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSYP 311
L+ +L + FNQ++M+LGA +CT P+C CPV C A + ++ N +P
Sbjct: 176 LSEKLTPAIETDSFNQAMMDLGATVCTRSKPSCDICPVEQSCLAKAGDQQMN------FP 229
Query: 312 MKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRDEGLLAGLWEFPSI 367
K K ++ + V+ L N+ ++ ++ KR G+ GLW F +
Sbjct: 230 QKKPK-KKIPEKQTIMVIPRLK-NENCDKV------LMEKRPPVGIWGGLWCFHEV 277
Score = 56 (24.8 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 401 ILREDVGEFVHIFSHIRLKVHVELLVLCIKGGIDKWVEKQDKGTLSWKCVDGGTLASMGL 460
I + + EF H FSH L + ++V C + + K E + W + G S+GL
Sbjct: 295 ISSQTLTEFRHTFSHFHLDI-TPVVVDCQQLEVSKINEPNQQ---KWYDLHQGL--SVGL 348
Query: 461 TSGVRKVYTMVQ 472
+ +K+ T+++
Sbjct: 349 AASTQKLLTLLR 360
>UNIPROTKB|E9PM53 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
InterPro:IPR003265 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS01155 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0004519 EMBL:AL359540 HGNC:HGNC:7527
IPI:IPI01012578 ProteinModelPortal:E9PM53 SMR:E9PM53
Ensembl:ENST00000528013 ArrayExpress:E9PM53 Bgee:E9PM53
Uniprot:E9PM53
Length = 248
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 97/173 (56%), Positives = 116/173 (67%)
Query: 74 LFSE-KEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
LF + EV R SLL WYD+ +R+LPW AY VWVSEVMLQQT+V
Sbjct: 72 LFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRR--AYAVWVSEVMLQQTQVA 129
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPN 191
TVI+YY WM KWPT+ LA ASLEEVN++WAGLGYY R R L EGA+ +V E G P
Sbjct: 130 TVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPR 189
Query: 192 TVSDLRKV-PGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDT 243
T L+++ PG+G YTAGAIASIAF + VVDGNV RVL R++AI A+P T
Sbjct: 190 TAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSST 242
>UNIPROTKB|Q9KUR3 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 418 (152.2 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 86/213 (40%), Positives = 121/213 (56%)
Query: 85 QSLLQWYDK-NQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYNRWMT 143
Q++L WYD ++ LPW AY VW+SE+MLQQT+V TVI Y+ R++
Sbjct: 6 QAILTWYDAYGRKNLPWQQNKN----------AYRVWLSEIMLQQTQVATVIPYFERFLE 55
Query: 144 KWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPNTVSDLRKVPGI 202
++PT+H LA A +EV W GLGYY RAR L + A+M+V+E G FP + + +PG+
Sbjct: 56 RFPTVHALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGV 115
Query: 203 GNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRP 262
G TA A+ S +K+ ++DGNV R LAR A+ P S W A
Sbjct: 116 GRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDV 175
Query: 263 GDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
+NQ++M++GA+ICT P C+ CPV C A
Sbjct: 176 DKYNQAMMDMGAMICTRSKPKCSLCPVESFCLA 208
Score = 40 (19.1 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 344 DGVFILVKRRDEGLLAGLWEFP-SIILDGETDITTR 378
D L +R G+ GL+ FP S I + +T I R
Sbjct: 239 DNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQR 274
Score = 38 (18.4 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 409 FVHIFSHIRLKVHVELLVLCIKGGI 433
F H FSH L + LL L K I
Sbjct: 290 FRHTFSHYHLDITPILLQLSRKPDI 314
>TIGR_CMR|VC_0452 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 418 (152.2 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 86/213 (40%), Positives = 121/213 (56%)
Query: 85 QSLLQWYDK-NQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYNRWMT 143
Q++L WYD ++ LPW AY VW+SE+MLQQT+V TVI Y+ R++
Sbjct: 6 QAILTWYDAYGRKNLPWQQNKN----------AYRVWLSEIMLQQTQVATVIPYFERFLE 55
Query: 144 KWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPNTVSDLRKVPGI 202
++PT+H LA A +EV W GLGYY RAR L + A+M+V+E G FP + + +PG+
Sbjct: 56 RFPTVHALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGV 115
Query: 203 GNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRP 262
G TA A+ S +K+ ++DGNV R LAR A+ P S W A
Sbjct: 116 GRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDV 175
Query: 263 GDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
+NQ++M++GA+ICT P C+ CPV C A
Sbjct: 176 DKYNQAMMDMGAMICTRSKPKCSLCPVESFCLA 208
Score = 40 (19.1 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 344 DGVFILVKRRDEGLLAGLWEFP-SIILDGETDITTR 378
D L +R G+ GL+ FP S I + +T I R
Sbjct: 239 DNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQR 274
Score = 38 (18.4 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 409 FVHIFSHIRLKVHVELLVLCIKGGI 433
F H FSH L + LL L K I
Sbjct: 290 FRHTFSHYHLDITPILLQLSRKPDI 314
>UNIPROTKB|P17802 [details] [associations]
symbol:mutY "adenine glycosylase; G.C --> T.A
transversions" species:83333 "Escherichia coli K-12" [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016798 "hydrolase activity, acting on
glycosyl bonds" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair"
evidence=IEA;IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 GO:GO:0016787 DrugBank:DB00173
EMBL:U28377 GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 EMBL:X52391 EMBL:M59471 PIR:B38535
RefSeq:NP_417436.1 RefSeq:YP_491160.1 PDB:1KG2 PDB:1KG3 PDB:1KG4
PDB:1KG5 PDB:1KG6 PDB:1KG7 PDB:1KQJ PDB:1MUD PDB:1MUN PDB:1MUY
PDB:1WEF PDB:1WEG PDB:1WEI PDBsum:1KG2 PDBsum:1KG3 PDBsum:1KG4
PDBsum:1KG5 PDBsum:1KG6 PDBsum:1KG7 PDBsum:1KQJ PDBsum:1MUD
PDBsum:1MUN PDBsum:1MUY PDBsum:1WEF PDBsum:1WEG PDBsum:1WEI
ProteinModelPortal:P17802 SMR:P17802 DIP:DIP-10289N IntAct:P17802
MINT:MINT-1240449 PRIDE:P17802 EnsemblBacteria:EBESCT00000003975
EnsemblBacteria:EBESCT00000004732 EnsemblBacteria:EBESCT00000004734
EnsemblBacteria:EBESCT00000004736 EnsemblBacteria:EBESCT00000018160
EnsemblBacteria:EBESCT00000232596 EnsemblBacteria:EBESCT00000232600
GeneID:12933365 GeneID:947447 KEGG:ecj:Y75_p2891 KEGG:eco:b2961
PATRIC:32121336 EchoBASE:EB0622 EcoGene:EG10627
HOGENOM:HOG000028744 OMA:FHLDIQP ProtClustDB:PRK10880
BioCyc:EcoCyc:EG10627-MONOMER BioCyc:ECOL316407:JW2928-MONOMER
EvolutionaryTrace:P17802 Genevestigator:P17802 Uniprot:P17802
Length = 350
Score = 437 (158.9 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 91/219 (41%), Positives = 127/219 (57%)
Query: 79 EVKKIRQSLLQWYDKNQRE-LPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDY 137
+ + +L WYDK R+ LPW Y VW+SEVMLQQT+V TVI Y
Sbjct: 2 QASQFSAQVLDWYDKYGRKTLPWQIDKT----------PYKVWLSEVMLQQTQVATVIPY 51
Query: 138 YNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVA-EGDGFPNTVSDL 196
+ R+M ++PT+ LA A L+EV +W GLGYY RAR L + A+ + G FP T ++
Sbjct: 52 FERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEV 111
Query: 197 RKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQL 256
+PG+G TAGAI S++ + P++DGNV RVLAR A+S P W L+ Q+
Sbjct: 112 AALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQV 171
Query: 257 VDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
+ FNQ++M+LGA+ICT P C+ CP+ + C A
Sbjct: 172 TPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIA 210
Score = 46 (21.3 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 339 ERTQPD--GVFILVKRRDEGLLA-----GLW 362
++T P+ G F+L++ DE LLA GLW
Sbjct: 225 KQTLPERTGYFLLLQHEDEVLLAQRPPSGLW 255
>TIGR_CMR|SO_3368 [details] [associations]
symbol:SO_3368 "A/G-specific adenine glycosylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744
OMA:FHLDIQP HSSP:P17802 RefSeq:NP_718922.1
ProteinModelPortal:Q8EBX7 SMR:Q8EBX7 GeneID:1171048
KEGG:son:SO_3368 PATRIC:23526410 ProtClustDB:CLSK907131
Uniprot:Q8EBX7
Length = 365
Score = 425 (154.7 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 94/226 (41%), Positives = 126/226 (55%)
Query: 78 KEVKKIRQSLLQWYDKNQRE-LPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVID 136
K ++ WYD + R+ LPW Y VWVSE+MLQQT+V TVI
Sbjct: 2 KSTASFATRIVNWYDNHGRKTLPWQQDKT----------PYRVWVSEIMLQQTQVATVIP 51
Query: 137 YYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPNTVSD 195
YY R+M ++P + LA A +EV W GLGYY RAR L + AKMI E G FP
Sbjct: 52 YYQRFMQRFPNVLALANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQ 111
Query: 196 LRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQ 255
+ +PGIG TAGA+ S++ + P++DGNV RVLAR AI P + W+L Q
Sbjct: 112 VLALPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQ 171
Query: 256 LVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKR 301
L +NQ++M++GA ICT PNC +CPV+ C+A M ++
Sbjct: 172 LTPQQDIQKYNQAMMDIGASICTRSKPNCAACPVAVDCKAQLMGRQ 217
Score = 58 (25.5 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 26/84 (30%), Positives = 32/84 (38%)
Query: 344 DGVFILVKRRDEGLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILR 403
D L KR G+ GLW FP E + T EA + L+P
Sbjct: 242 DNQVFLAKRPPAGIWGGLWCFPEF--SSEAALNTELEAQGY---QPTQLEPL-------- 288
Query: 404 EDVGEFVHIFSHIRLKVHVELLVL 427
+G F H FSH L + LL L
Sbjct: 289 --IG-FRHTFSHFHLDIQPMLLDL 309
>GENEDB_PFALCIPARUM|PF11_0306 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine
glycosylase, putative" species:5833 "Plasmodium falciparum"
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR003265 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703
KO:K03575 RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 359 (131.4 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 72/200 (36%), Positives = 125/200 (62%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLL 176
Y +++SE+MLQQT+V TV+++Y +WM KW I LAK +L++V +W GLGYY RA+ LL
Sbjct: 212 YQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNRAKNLL 271
Query: 177 EGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKA 235
E K++V + +G FPN + L+ +PGIG+YT+ AI + +D N+IR+ +R+
Sbjct: 272 ECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIFSRITD 331
Query: 236 ISANPKDTSTVKNFWKLATQLVDSCRPG--DFNQSLMELGAVICTPLNPNCTSCPVSDKC 293
+ N ++ T+ + ++++ S D +Q+ M+LG+ +C +P+C+ CP++ C
Sbjct: 332 -TINYYNSGTLLKHCEKVSEILCSGESNYSDLSQAFMDLGSSVCNN-SPDCSQCPINKYC 389
Query: 294 QAY--SMSKRDNSVLVTSYP 311
Y S K+ +++ T +P
Sbjct: 390 MIYLKSNKKKQHNLFNTKHP 409
Score = 78 (32.5 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 64 LPLEEEDIEDLFSEKEVKKIRQSLLQWYDKNQRELPW 100
LP E+ D F ++ ++++ LL WY K +R+LPW
Sbjct: 23 LPNEQSDYHYSFLQRYSVELKKDLLNWYYKYRRKLPW 59
Score = 62 (26.9 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 344 DGVFILVKRRDEGLLAGLWEFPSIILD--GETDITTRREAAECFLKKSFNLDPRNNCSII 401
+ ++++K D L + + FP I+LD + D + + L KS N+ +
Sbjct: 480 EDTYMMIKNTDTNLFSMHYLFPFILLDTYDKNDCVKVKHFND--LLKSLNVTNSEKDRYL 537
Query: 402 LREDVGEFVHIFSHIRLKVHVEL 424
+ F H FSH+ H+ L
Sbjct: 538 Y---INNFKHKFSHLTYHTHIYL 557
>UNIPROTKB|Q8II68 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine glycosylase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR003265 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703 KO:K03575
RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 359 (131.4 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 72/200 (36%), Positives = 125/200 (62%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLL 176
Y +++SE+MLQQT+V TV+++Y +WM KW I LAK +L++V +W GLGYY RA+ LL
Sbjct: 212 YQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNRAKNLL 271
Query: 177 EGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKA 235
E K++V + +G FPN + L+ +PGIG+YT+ AI + +D N+IR+ +R+
Sbjct: 272 ECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIFSRITD 331
Query: 236 ISANPKDTSTVKNFWKLATQLVDSCRPG--DFNQSLMELGAVICTPLNPNCTSCPVSDKC 293
+ N ++ T+ + ++++ S D +Q+ M+LG+ +C +P+C+ CP++ C
Sbjct: 332 -TINYYNSGTLLKHCEKVSEILCSGESNYSDLSQAFMDLGSSVCNN-SPDCSQCPINKYC 389
Query: 294 QAY--SMSKRDNSVLVTSYP 311
Y S K+ +++ T +P
Sbjct: 390 MIYLKSNKKKQHNLFNTKHP 409
Score = 78 (32.5 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 64 LPLEEEDIEDLFSEKEVKKIRQSLLQWYDKNQRELPW 100
LP E+ D F ++ ++++ LL WY K +R+LPW
Sbjct: 23 LPNEQSDYHYSFLQRYSVELKKDLLNWYYKYRRKLPW 59
Score = 62 (26.9 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 344 DGVFILVKRRDEGLLAGLWEFPSIILD--GETDITTRREAAECFLKKSFNLDPRNNCSII 401
+ ++++K D L + + FP I+LD + D + + L KS N+ +
Sbjct: 480 EDTYMMIKNTDTNLFSMHYLFPFILLDTYDKNDCVKVKHFND--LLKSLNVTNSEKDRYL 537
Query: 402 LREDVGEFVHIFSHIRLKVHVEL 424
+ F H FSH+ H+ L
Sbjct: 538 Y---INNFKHKFSHLTYHTHIYL 557
>TIGR_CMR|BA_0522 [details] [associations]
symbol:BA_0522 "A/G-specific adenine glycosylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
HSSP:P17802 OMA:QAVKPYF RefSeq:NP_843058.1 RefSeq:YP_017141.1
RefSeq:YP_026771.1 ProteinModelPortal:Q81YV8 SMR:Q81YV8
DNASU:1087779 EnsemblBacteria:EBBACT00000010013
EnsemblBacteria:EBBACT00000017545 EnsemblBacteria:EBBACT00000019690
GeneID:1087779 GeneID:2817839 GeneID:2853132 KEGG:ban:BA_0522
KEGG:bar:GBAA_0522 KEGG:bat:BAS0491 ProtClustDB:CLSK886914
BioCyc:BANT260799:GJAJ-534-MONOMER
BioCyc:BANT261594:GJ7F-559-MONOMER Uniprot:Q81YV8
Length = 365
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 93/226 (41%), Positives = 132/226 (58%)
Query: 73 DLFSEKEVKKIRQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQ 132
++ + +++ + L+ W++K QR+LPW Y VWVSE+MLQQTRV+
Sbjct: 4 EILNNFNIEQFQNDLIGWFEKEQRDLPWRKNKD----------PYRVWVSEIMLQQTRVE 53
Query: 133 TVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDGF-PN 191
V YY +M K+PT+ LA A EEV + W GLGYY RAR L K + G P+
Sbjct: 54 AVKPYYANFMGKFPTLEALANADDEEVLKAWEGLGYYSRARNLHAAVKEVKEVYGGIVPS 113
Query: 192 TVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWK 251
V + K+ G+G YT GAI SIA+ P VDGNV+RVL+R+ ++ + T K F +
Sbjct: 114 DVKKIEKLKGVGPYTKGAILSIAYGIPEPAVDGNVVRVLSRILSVWDDIAKPKTRKVFEE 173
Query: 252 LATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQAYS 297
+ +++ + P FNQ LMELGA+IC P NP C CPV + C+ Y+
Sbjct: 174 IVREIISAENPSYFNQGLMELGALICIPKNPACLLCPVREHCRGYA 219
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 91/301 (30%), Positives = 136/301 (45%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLL 176
Y VWVSE+MLQQTRV+ V YY +M K+PT+ LA A EEV + W GLGYY RAR L
Sbjct: 38 YRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLEALANADDEEVLKAWEGLGYYSRARNLH 97
Query: 177 EGAKMIVAEGDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVI--RVLARLK 234
K + G SD++K+ + G A + + + V+ L
Sbjct: 98 AAVKEVKEVYGGI--VPSDVKKIEKLKG--VGPYTKGAILSIAYGIPEPAVDGNVVRVLS 153
Query: 235 AISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQ 294
I + D + K K+ ++V + N S G + L C P + C
Sbjct: 154 RILSVWDDIAKPKTR-KVFEEIVREIISAE-NPSYFNQGLMELGALI--CI--PKNPACL 207
Query: 295 AYSMSKRDNSVLVTSYPMKVLKARQRHDVSAACVVEILGGNDESERTQPDGVFILVKRRD 354
+ R++ K L + + A +V I+ G ++E DG +++ KR
Sbjct: 208 LCPV--REHCRGYAEGVQKELPVKSK--AKAPTMVPIVAGVLQTE----DGRYVINKRPS 259
Query: 355 EGLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFS 414
GLLA +WEFP++ L GE I ++E ++K+ F L SI + E H F+
Sbjct: 260 TGLLANMWEFPNVEL-GE-GIRNQKEQLIDYMKEKFEL------SISIEEYAMNVQHTFT 311
Query: 415 H 415
H
Sbjct: 312 H 312
>TIGR_CMR|CJE_1792 [details] [associations]
symbol:CJE_1792 "A/G-specific adenine glycosylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0019104 KO:K03575
eggNOG:COG1194 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
RefSeq:YP_179763.1 ProteinModelPortal:Q5HSH2 STRING:Q5HSH2
GeneID:3232419 KEGG:cjr:CJE1792 PATRIC:20045396 OMA:WQGAGYY
ProtClustDB:CLSK879335 BioCyc:CJEJ195099:GJC0-1822-MONOMER
Uniprot:Q5HSH2
Length = 339
Score = 421 (153.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 92/223 (41%), Positives = 140/223 (62%)
Query: 77 EKEVKKIRQSLLQWYDKNQRE-LPWXXXXXXX--XXXXXXXXAYGVWVSEVMLQQTRVQT 133
+KE++K++++LL WY+KN R+ LPW AYGV++SE+MLQQT+V++
Sbjct: 3 KKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQVKS 62
Query: 134 VID-YYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAEGDG-FPN 191
V++ +Y ++ K+PT+ LA A+ +E+ + W GLGYY RAR L + A V + + P
Sbjct: 63 VLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRARNLKKAALECVDKFEAKLPK 122
Query: 192 TVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWK 251
V DL+K+ GIG YTAGAIA + + V VDGN+ RVL+RL A+ NP ++K K
Sbjct: 123 EVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALE-NP----SMKELEK 177
Query: 252 LATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQ 294
A +L++ D NQ+L+++GA++C N C CP+ D CQ
Sbjct: 178 RAKELLNLNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQ 220
Score = 39 (18.8 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 406 VGEFVHIFSHIRLKVHV 422
VGEF H ++ +L + V
Sbjct: 285 VGEFKHSYTKYKLNIKV 301
>UNIPROTKB|Q5T418 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 UniGene:Hs.271353 HGNC:HGNC:7527 HOGENOM:HOG000028743
IPI:IPI00647822 SMR:Q5T418 MINT:MINT-1380954 STRING:Q5T418
Ensembl:ENST00000412971 Uniprot:Q5T418
Length = 215
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/152 (54%), Positives = 103/152 (67%)
Query: 146 PTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPNTVSDLRKV-PGIG 203
P + L++ L EVN++WAGLGYY R R L EGA+ +V E G P T L+++ PG+G
Sbjct: 3 PLVSRLSR--LWEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVG 60
Query: 204 NYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPG 263
YTAGAIASIAF + VVDGNV RVL R++AI A+P T + W LA QLVD RPG
Sbjct: 61 RYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPG 120
Query: 264 DFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
DFNQ+ MELGA +CTP P C+ CPV C+A
Sbjct: 121 DFNQAAMELGATVCTPQRPLCSQCPVESLCRA 152
>UNIPROTKB|O53574 [details] [associations]
symbol:mutY "PROBABLE ADENINE GLYCOSYLASE MUTY"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
SMART:SM00478 SMART:SM00525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:BX842583 GO:GO:0051539
GO:GO:0004519 GO:GO:0016798 KO:K03575 EMBL:AL123456 PIR:F70804
RefSeq:NP_218106.1 RefSeq:NP_338239.1 RefSeq:YP_006517079.1
HSSP:P17802 SMR:O53574 EnsemblBacteria:EBMYCT00000003804
EnsemblBacteria:EBMYCT00000070555 GeneID:13317198 GeneID:886639
GeneID:926528 KEGG:mtc:MT3695 KEGG:mtu:Rv3589 KEGG:mtv:RVBD_3589
PATRIC:18129879 TubercuList:Rv3589 HOGENOM:HOG000028742 OMA:IMLQQTP
ProtClustDB:CLSK792583 Uniprot:O53574
Length = 304
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 86 SLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYNRWMTKW 145
+LL WY ++ R+LPW + + VSE MLQQT V+ + W+ +W
Sbjct: 20 NLLAWYQRSHRDLPWREPGVS---------PWQILVSEFMLQQTPAARVLAIWPDWVRRW 70
Query: 146 PTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPNTVSDLRKVPGIGN 204
PT A AS +V W LGY RRA+ L E A +I + D P+ + L +PG+G+
Sbjct: 71 PTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGS 130
Query: 205 YTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGD 264
YTA A+A A+++ VPVVD NV RV+AR A+ S ++ + L +
Sbjct: 131 YTARAVACFAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPE 190
Query: 265 FNQSLMELGAVICTPLNPNCTSCPVSDKC 293
F+ +LMELGA +CT P C CP+ D C
Sbjct: 191 FSVALMELGATVCTARTPRCGLCPL-DWC 218
>TIGR_CMR|GSU_1613 [details] [associations]
symbol:GSU_1613 "A/G-specific adenine glycosylase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0004844
"uracil DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR003265
InterPro:IPR011257 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004519 KO:K03575
HSSP:P17802 HOGENOM:HOG000028742 RefSeq:NP_952664.1
ProteinModelPortal:Q74CQ9 GeneID:2687415 KEGG:gsu:GSU1613
PATRIC:22026073 OMA:WHNALMD ProtClustDB:CLSK873803
BioCyc:GSUL243231:GH27-1573-MONOMER Uniprot:Q74CQ9
Length = 285
Score = 249 (92.7 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 65/194 (33%), Positives = 102/194 (52%)
Query: 84 RQSLLQWYDKNQRELPWXXXXXXXXXXXXXXXAYGVWVSEVMLQQTRVQTVIDYYNRWMT 143
R+ + WY +RELPW Y + VSE+MLQQT+V+ V + Y ++
Sbjct: 25 RRIVYDWYASQRRELPWRETFD----------PYAILVSEIMLQQTQVERVREKYPTFLA 74
Query: 144 KWPTIHHLAKASLEEVNEMWAGLGYYRRARFLLEGAKMIVAE-GDGFPNTVSDLRKVPGI 202
++P + LA A LE V W GLGY RRA L A+ +VA G P ++L ++PGI
Sbjct: 75 EFPNLRALAAAPLERVLAAWQGLGYNRRAVNLKRCAEAVVASLGGELPADPNELVRLPGI 134
Query: 203 GNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTV--KNFWKLATQLVDSC 260
G YT+ A+A+ AF +P ++ N+ V + A D S++ ++ L Q +D
Sbjct: 135 GTYTSRAVAAFAFNTPLPFIETNIRSVY--IHHFFA---DQSSIHDRDLMPLIEQTLDRD 189
Query: 261 RPGDFNQSLMELGA 274
P ++ +LM+ G+
Sbjct: 190 NPREWYYALMDYGS 203
>UNIPROTKB|H0YEI2 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF10576 PROSITE:PS00764
SMART:SM00525 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0006281 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 HGNC:HGNC:7527 Ensembl:ENST00000467459 Bgee:H0YEI2
Uniprot:H0YEI2
Length = 184
Score = 239 (89.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 44/75 (58%), Positives = 52/75 (69%)
Query: 221 VVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPL 280
VVDGNV RVL R++AI A+P T + W LA QLVD RPGDFNQ+ MELGA +CTP
Sbjct: 4 VVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQ 63
Query: 281 NPNCTSCPVSDKCQA 295
P C+ CPV C+A
Sbjct: 64 RPLCSQCPVESLCRA 78
>UNIPROTKB|H0YCY5 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS51462
SMART:SM00525 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0006281 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0004519 EMBL:AL359540 HGNC:HGNC:7527
Ensembl:ENST00000529892 Uniprot:H0YCY5
Length = 213
Score = 128 (50.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 262 PGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQA 295
PGDFNQ+ MELGA +CTP P C+ CPV C+A
Sbjct: 2 PGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 35
Score = 93 (37.8 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 356 GLLAGLWEFPSIILDGETDITTRREAAECFLKKSFNLDPRNNCSIILREDVGEFVHIFSH 415
GLLAGLWEFPS+ + + +R+A L++ P + LR +GE VH FSH
Sbjct: 60 GLLAGLWEFPSVTWEPSEQL--QRKALLQELQRWAGPLPATH----LRH-LGEVVHTFSH 112
Query: 416 IRLKVHVELLVL 427
I+L V L L
Sbjct: 113 IKLTYQVYGLAL 124
>TIGR_CMR|DET_0935 [details] [associations]
symbol:DET_0935 "endonuclease III" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PIRSF:PIRSF001435 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 RefSeq:YP_181660.1
ProteinModelPortal:Q3Z7Y9 STRING:Q3Z7Y9 GeneID:3229754
KEGG:det:DET0935 PATRIC:21608917 ProtClustDB:CLSK837188
BioCyc:DETH243164:GJNF-936-MONOMER Uniprot:Q3Z7Y9
Length = 218
Score = 156 (60.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 144 KWPTIHHLAKASLEEVNEMWAGLGYYR-RARFLLEGAKMIVAE-GDGFPNTVSDLRKVPG 201
K+P + A ASL E+ + G++ +A ++ A+ +V+ G P ++D+ +PG
Sbjct: 61 KYPGVQAFADASLAELEQDIKSSGFFHNKALNIIGAARAVVSRFGGDVPRNMADMLTLPG 120
Query: 202 IGNYTAGAIASIAFKEVVPV-VDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSC 260
+G TA + AF V + VD +V R+ RL +S N T VK L L+
Sbjct: 121 VGRKTANVVLHNAFGLVEGIAVDTHVKRLAGRL-GLSTN---TDPVKIEQDLMA-LIPRS 175
Query: 261 RPGDFNQSLMELGAVICTPLNPNCTSCPVSDKC 293
G+F+ L++ G +C P C C ++D C
Sbjct: 176 EWGNFSYYLIDHGRAVCDAKKPRCPECVLNDIC 208
>TAIR|locus:2061345 [details] [associations]
symbol:ATNTH1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP002685 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
EMBL:AC007169 GO:GO:0004519 GO:GO:0042644 GO:GO:0019104 KO:K10773
IPI:IPI00540590 PIR:H84720 RefSeq:NP_565725.1 UniGene:At.10180
HSSP:P20625 ProteinModelPortal:Q9SIC4 SMR:Q9SIC4 STRING:Q9SIC4
PRIDE:Q9SIC4 EnsemblPlants:AT2G31450.1 GeneID:817703
KEGG:ath:AT2G31450 TAIR:At2g31450 InParanoid:Q9SIC4 OMA:DIEDFAY
PhylomeDB:Q9SIC4 ProtClustDB:CLSN2688602 Genevestigator:Q9SIC4
Uniprot:Q9SIC4
Length = 379
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 153 KASLEEVNEMWAGLGYY-RRARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAI 210
KA + E+ +G+Y R+A ++ + A++ + + DG P+++ DL +PGIG A I
Sbjct: 211 KADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLI 270
Query: 211 ASIAFKEVVPV-VDGNVIRVLARLKAISA-NPKDTSTVKNFWKLATQL-VDSCRPGDFNQ 267
IA+ +V + VD +V R+ RL +S K +T ++A Q + N
Sbjct: 271 LHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINP 330
Query: 268 SLMELGAVICTPLNPNCTSCPVSDKCQA 295
L+ G +ICTP+ P C +C VS C A
Sbjct: 331 LLVGFGQMICTPIRPRCEACSVSKLCPA 358
>TAIR|locus:2198738 [details] [associations]
symbol:NTH2 "endonuclease III 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 EMBL:CP002684 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0004519
GO:GO:0042644 GO:GO:0019104 KO:K10773 EMBL:AK316958 IPI:IPI00534650
RefSeq:NP_973767.1 UniGene:At.26529 ProteinModelPortal:B9DFZ0
PRIDE:B9DFZ0 EnsemblPlants:AT1G05900.2 GeneID:837100
KEGG:ath:AT1G05900 TAIR:At1g05900 OMA:CGINNIC PhylomeDB:B9DFZ0
Genevestigator:Q3EDI2 Uniprot:B9DFZ0
Length = 386
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 153 KASLEEVNEMWAGLGYY-RRARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAI 210
KA + E+ +G+Y R+A + + AK+ + E DG P T+ +L +PG+G A +
Sbjct: 218 KADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLV 277
Query: 211 ASIAFKEVVPV-VDGNVIRVLARLKAIS--ANPKDTSTVKNFWKLATQLVDSCRPGDFNQ 267
+A+ +V + VD +V R+ RL +S + TS+ + Q + N
Sbjct: 278 LHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINF 337
Query: 268 SLMELGAVICTPLNPNCTSCPVSDKC-QAYSMSKRDNSVLVTSYPMKVL 315
L+ G ICTPL P+C +C +++ C A+ + +S L S K L
Sbjct: 338 LLVGFGQTICTPLRPHCGTCSITEICPSAFKETPSTSSKLKKSIKSKKL 386
>TIGR_CMR|CHY_1121 [details] [associations]
symbol:CHY_1121 "endonuclease III" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_359967.1
ProteinModelPortal:Q3AD17 STRING:Q3AD17 GeneID:3726382
KEGG:chy:CHY_1121 PATRIC:21275382
BioCyc:CHYD246194:GJCN-1120-MONOMER Uniprot:Q3AD17
Length = 210
Score = 142 (55.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 157 EEVNEMWAGLGYYR-RARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIA 214
EE++ LG YR +AR L++ A+++ E G P++ ++L K+PG+G TA I +
Sbjct: 70 EELSRQIRSLGLYRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPKTAEVIVGVG 129
Query: 215 FKEVVPVVDGNVIRVLARLKAISAN-PKDTS-TVKNFWKLATQLVDSCRPGDFNQSLMEL 272
F + VD +V RV RL A P+ S +K + + + D + L+
Sbjct: 130 FNKPSFPVDTHVFRVARRLGLSKARTPEGVSFDLKKIFPPNSWI-------DLHHRLIFF 182
Query: 273 GAVICTPLNPNCTSCPVSDKCQ 294
G IC P+C CP + CQ
Sbjct: 183 GRRICKAQKPSCNICPFPEFCQ 204
>FB|FBgn0032907 [details] [associations]
symbol:CG9272 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000703 "oxidized
pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 EMBL:AE014134 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0006974 GO:GO:0051539 GO:GO:0004519 KO:K10773
GeneTree:ENSGT00510000047513 RefSeq:NP_610078.2
ProteinModelPortal:Q9VIH0 SMR:Q9VIH0 IntAct:Q9VIH0 STRING:Q9VIH0
EnsemblMetazoa:FBtr0089944 GeneID:35365 KEGG:dme:Dmel_CG9272
UCSC:CG9272-RA FlyBase:FBgn0032907 InParanoid:Q9VIH0 OMA:QTICTPV
OrthoDB:EOG4ZGMV5 PhylomeDB:Q9VIH0 GenomeRNAi:35365 NextBio:793173
ArrayExpress:Q9VIH0 Bgee:Q9VIH0 Uniprot:Q9VIH0
Length = 388
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/184 (24%), Positives = 88/184 (47%)
Query: 121 VSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFLLEGA 179
V+ ++ QT+ QT + NR + T + + + E+ + + +Y+ +A++L +
Sbjct: 201 VALMLSSQTKDQTTYEAMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTV 260
Query: 180 KMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARLKAIS 237
+++ + G P+ V DL +PG+G A ++A+ ++ + VD +V R+ RL +
Sbjct: 261 EILTDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRLGWV- 319
Query: 238 ANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKC-QAY 296
PK T + + + + N + G ICTP+ PNC C D C A+
Sbjct: 320 --PKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPSAH 377
Query: 297 SMSK 300
+ +K
Sbjct: 378 AETK 381
>ZFIN|ZDB-GENE-120511-4 [details] [associations]
symbol:nthl1 "nth endonuclease III-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-120511-4
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 GeneTree:ENSGT00510000047513 EMBL:CABZ01067150
EMBL:CABZ01067151 IPI:IPI00628612 Ensembl:ENSDART00000062941
Bgee:F1QBP9 Uniprot:F1QBP9
Length = 402
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 52/203 (25%), Positives = 89/203 (43%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R ++ + K E + ++ +G++R + +++
Sbjct: 140 YQVLISLMLSSQTKDQVTAGAMQRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYI 199
Query: 176 LEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ +I E G PNTV L ++PG+G A IA+ +V + VD +V R+ RL
Sbjct: 200 KQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRL 259
Query: 234 ---KAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
K + P++T W L L + N L+ G +C P+ P C+ C
Sbjct: 260 GWTKKETKTPEETRRALEEW-LPRDLWS-----EINWLLVGFGQQVCLPVGPLCSVCLNQ 313
Query: 291 DKCQAYSMSKRDNSVLVTSYPMK 313
C S + S + S P K
Sbjct: 314 HTCP--SAHRSSPSKKIKSSPAK 334
>UNIPROTKB|F1NQP6 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
GO:GO:0019104 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC EMBL:AADN02023662
IPI:IPI00602448 Ensembl:ENSGALT00000009013 ArrayExpress:F1NQP6
Uniprot:F1NQP6
Length = 251
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R + T+ + + + ++ +G++R + +++
Sbjct: 69 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 128
Query: 176 LEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ ++ + G P TV +L K+PG+G A +IA+ V + VD +V R+ RL
Sbjct: 129 KQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNRL 188
Query: 234 KAISAN---PKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
K + P++T W L L R + N L+ G C P+NP C C
Sbjct: 189 KWVKKETRYPEETRVALEDW-LPRDL---WR--EINWLLVGFGQQTCLPVNPRCKECLNQ 242
Query: 291 DKC 293
D C
Sbjct: 243 DIC 245
>TIGR_CMR|BA_1570 [details] [associations]
symbol:BA_1570 "endonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0000703 "oxidized pyrimidine nucleobase
lesion DNA N-glycosylase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
Pfam:PF10576 PIRSF:PIRSF001435 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0051539 GO:GO:0005622 GO:GO:0004519 GO:GO:0003906 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625
RefSeq:NP_844020.1 RefSeq:YP_018193.1 RefSeq:YP_027725.1
ProteinModelPortal:Q81SS5 SMR:Q81SS5 DNASU:1083694
EnsemblBacteria:EBBACT00000010838 EnsemblBacteria:EBBACT00000014468
EnsemblBacteria:EBBACT00000019730 GeneID:1083694 GeneID:2815568
GeneID:2851771 KEGG:ban:BA_1570 KEGG:bar:GBAA_1570 KEGG:bat:BAS1456
ProtClustDB:CLSK2521133 BioCyc:BANT260799:GJAJ-1530-MONOMER
BioCyc:BANT261594:GJ7F-1594-MONOMER Uniprot:Q81SS5
Length = 215
Score = 134 (52.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 144 KWPTIHHLAKASLEEVNEMWAGLGYYR-RARFLLEGAKMIVAEGDG-FPNTVSDLRKVPG 201
K+ T SLEE+ + +G YR +A+ + + +M++ + +G P +L K+PG
Sbjct: 58 KYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPG 117
Query: 202 IGNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCR 261
+G TA + S+AF VD +V RV RL AI KD+ V K + +
Sbjct: 118 VGRKTANVVVSVAFGIPAIAVDTHVERVSKRL-AI-CRWKDS--VLEVEKTLMKKIPMDE 173
Query: 262 PGDFNQSLMELGAVICTPLNPNCTSCPVSDKCQ 294
+ ++ G C P C CP+ + C+
Sbjct: 174 WSVTHHRMIFFGRYHCKAQRPQCEECPLLEVCR 206
>UNIPROTKB|Q97QE0 [details] [associations]
symbol:nth "Endonuclease III" species:170187 "Streptococcus
pneumoniae TIGR4" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0005622 EMBL:AE005672 GenomeReviews:AE005672_GR
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625 PIR:D98016
PIR:F95148 RefSeq:NP_345743.1 ProteinModelPortal:Q97QE0
EnsemblBacteria:EBSTRT00000027009 GeneID:931793 KEGG:spn:SP_1279
PATRIC:19706957 ProtClustDB:CLSK884066 Uniprot:Q97QE0
Length = 209
Score = 131 (51.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 145 WPTIHHLAKASLEEVNEMWAGLGYYR-RARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGI 202
+PT ++ A+ E+ + LG YR +A+FL + A+ ++ + DG P T +L + G+
Sbjct: 60 FPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGV 119
Query: 203 GNYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRP 262
G TA + S+ F VD +V R+ + K ++T K +++D P
Sbjct: 120 GRKTANVVMSVGFGIPAFAVDTHVERICKHHDIV----KKSATPLEVEK---RVMDILPP 172
Query: 263 GDF---NQSLMELGAVICTPLNPNCTSCP 288
+ +Q+++ G IC P NP C P
Sbjct: 173 EQWLAAHQAMIYFGRAICHPKNPECDQYP 201
>POMBASE|SPAC30D11.07 [details] [associations]
symbol:nth1 "DNA endonuclease III" species:4896
"Schizosaccharomyces pombe" [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISS] [GO:0006285
"base-excision repair, AP site formation" evidence=IMP;IDA]
[GO:0008534 "oxidized purine nucleobase lesion DNA N-glycosylase
activity" evidence=IMP] [GO:0034039 "8-oxo-7,8-dihydroguanine DNA
N-glycosylase activity" evidence=IDA] [GO:0034042 "5-formyluracil
DNA N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 PomBase:SPAC30D11.07
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005759
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 eggNOG:COG0177 KO:K10773 GO:GO:0034039 GO:GO:0006285
HOGENOM:HOG000252209 OrthoDB:EOG4T1MWS GO:GO:0034042 GO:GO:0034043
EMBL:AB191154 PIR:JC6066 RefSeq:NP_593210.1
ProteinModelPortal:Q09907 STRING:Q09907 EnsemblFungi:SPAC30D11.07.1
GeneID:2543510 KEGG:spo:SPAC30D11.07 OMA:CSECLNK NextBio:20804520
Uniprot:Q09907
Length = 355
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 155 SLEEV--NEMWAGLGYYRRARFLLEGAKMIVAE---GDGFPNTVSDLRKVPGIGNYTAGA 209
+++EV N++ +G++ R L+ I++E GD P+TV DL +PG+G
Sbjct: 88 NIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGD-IPDTVEDLMTLPGVGPKMGYL 146
Query: 210 IASIAFKEVVPV-VDGNVIRVLARLKAISANPKD-TSTVKNFWKLATQLVDSCRPGDFNQ 267
SIA+ + V + VD +V R+ L + ++ T W L +L + N
Sbjct: 147 CMSIAWNKTVGIGVDVHVHRICNLLHWCNTKTEEQTRAALQSW-LPKELWF-----ELNH 200
Query: 268 SLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSYPMKVLKARQRHDVS 324
+L+ G IC P C C +S K S K + + +T +K +K ++ S
Sbjct: 201 TLVGFGQTICLPRGRRCDMCTLSSKGLCPSAFKEKSGITITKRKVKTIKRVKKRPAS 257
>DICTYBASE|DDB_G0277247 [details] [associations]
symbol:apnB "putative endonuclease III" species:44689
"Dictyostelium discoideum" [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 dictyBase:DDB_G0277247
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0051539 GO:GO:0004519
EMBL:AAFI02000019 eggNOG:COG0177 KO:K10773 OMA:CSECLNK
RefSeq:XP_642760.1 ProteinModelPortal:Q86K43 STRING:Q86K43
EnsemblProtists:DDB0232975 GeneID:8620949 KEGG:ddi:DDB_G0277247
InParanoid:Q86K43 ProtClustDB:CLSZ2846854 Uniprot:Q86K43
Length = 349
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 147 TIHHLAKASLEEVNEMWAGLGYYRR-ARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGN 204
T+ + E+ + +G+Y+R A +L + A+++ + +G P T ++ ++PGIG
Sbjct: 185 TVDKMLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFKEIEQLPGIGP 244
Query: 205 YTAGAIASIAFKEVVPV-VDGNVIRVLARLKAISAN-PKDTSTVKNFWKLATQLVDSCRP 262
I IA+ V + VD ++ R+ RL + P++T W L +
Sbjct: 245 KMTNLIVQIAWGRVEGIAVDVHMHRISNRLGWVKTKTPEETMKDLESW-LPKE-----NW 298
Query: 263 GDFNQSLMELGAVICTPLNPNCTSCPVSDKC 293
N L+ G IC+P+NP C++C V++ C
Sbjct: 299 ATVNHLLVGFGQTICSPVNPKCSNCLVNNLC 329
>WB|WBGene00011201 [details] [associations]
symbol:nth-1 species:6239 "Caenorhabditis elegans"
[GO:0006281 "DNA repair" evidence=IEA;IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=IDA] [GO:0045008
"depyrimidination" evidence=IDA] [GO:0034042 "5-formyluracil DNA
N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IGI]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005634 GO:GO:0070301 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0045008
eggNOG:COG0177 EMBL:Z50874 GeneTree:ENSGT00510000047513
HOGENOM:HOG000252209 EMBL:AB518695 PIR:T24131 RefSeq:NP_001254906.1
RefSeq:NP_001254907.1 RefSeq:NP_001254908.1 RefSeq:NP_001254909.1
UniGene:Cel.10201 ProteinModelPortal:P54137 SMR:P54137
STRING:P54137 EnsemblMetazoa:R10E4.5d GeneID:187770
KEGG:cel:CELE_R10E4.5 CTD:187770 WormBase:R10E4.5a
WormBase:R10E4.5b WormBase:R10E4.5c WormBase:R10E4.5d
InParanoid:P54137 OMA:CLNQALC NextBio:936446 ArrayExpress:P54137
GO:GO:0034042 GO:GO:0034043 Uniprot:P54137
Length = 298
Score = 131 (51.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYRR-ARFL 175
+ V V+ ++ QTR + R +I + + + ++ + +G+Y+R A +L
Sbjct: 68 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYL 127
Query: 176 LEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ AK++ + G P+++ L +PG+G A + IA+ E V + VD +V R+ RL
Sbjct: 128 QKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRL 187
Query: 234 KAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDKC 293
I TST + K L+ N L+ G + C P+ P C +C C
Sbjct: 188 GWIK-----TSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTC 242
Query: 294 QAYSMSKRDNSVLVTSYPMKV 314
+ + + TS ++V
Sbjct: 243 PSSTAKNVKSETEETSTSIEV 263
>RGD|1309289 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=IEA;ISO] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA;ISO] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISO] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA;ISO] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA;ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 RGD:1309289 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 EMBL:CH473948 GO:GO:0019104 KO:K10773 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913
OrthoDB:EOG4933JH IPI:IPI00189546 RefSeq:NP_001099198.1
UniGene:Rn.14632 Ensembl:ENSRNOT00000016490 GeneID:29541
KEGG:rno:29541 UCSC:RGD:1309289 NextBio:609539 Uniprot:D4A4E8
Length = 300
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/186 (24%), Positives = 91/186 (48%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R + T+ + + + + + +G++R + +F+
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDLLGRLIYPVGFWRSKVKFI 177
Query: 176 LEGAKMIVA--EGDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLAR 232
+ ++ EGD P +V++L +PG+G A ++A+ V + VD +V R+ R
Sbjct: 178 KQTTAILQQRYEGD-IPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 236
Query: 233 LK---AISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPV 289
LK ++ +P++T +N + +++ S + N L+ G IC P++P C +C
Sbjct: 237 LKWTKKMTKSPEETR--RNLEEWLPRVLWS----EINGLLVGFGQQICLPVHPRCQACLN 290
Query: 290 SDKCQA 295
C A
Sbjct: 291 KALCPA 296
>TIGR_CMR|NSE_0246 [details] [associations]
symbol:NSE_0246 "endonuclease III" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 RefSeq:YP_506140.1 ProteinModelPortal:Q2GEF6
STRING:Q2GEF6 GeneID:3931594 KEGG:nse:NSE_0246 PATRIC:22680583
ProtClustDB:CLSK2528191 BioCyc:NSEN222891:GHFU-276-MONOMER
Uniprot:Q2GEF6
Length = 216
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 150 HLAKASLEEVNEMWAGLGYYR-RARFLLEGAKMIVAEGD-GFPNTVSDLRKVPGIGNYTA 207
H AK L ++ E +G + +A+ ++ AK ++++ PN L+ +PGIG +A
Sbjct: 69 HYAKMDLAKLKESIKTIGLHNNKAKNIIALAKKLISDKQTDIPNNFQYLQSLPGIGRKSA 128
Query: 208 GAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQ 267
I F E VD +V RV R+ + A +N ++ QL+++ Q
Sbjct: 129 NVILCTLFGEKRIAVDTHVFRVSNRIGLVHA--------RNVLEVEKQLLENIPKTFLPQ 180
Query: 268 SLMEL---GAVICTPLNPNCTSCPVSDKC 293
+ + L G IC P C +C ++D C
Sbjct: 181 AHLWLVLHGRYICKARKPECKNCIINDLC 209
>MGI|MGI:1313275 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO;IDA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=ISO] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=ISO;IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016798
"hydrolase activity, acting on glycosyl bonds" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 MGI:MGI:1313275 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 eggNOG:COG0177 GO:GO:0019104 GO:GO:0006296
HOGENOM:HOG000252209 HOVERGEN:HBG052675 OrthoDB:EOG4933JH
EMBL:AB006812 EMBL:AB009371 EMBL:AJ001617 EMBL:Y09688 EMBL:AK033701
IPI:IPI00136370 UniGene:Mm.148315 ProteinModelPortal:O35980
SMR:O35980 STRING:O35980 PhosphoSite:O35980 PRIDE:O35980
InParanoid:O35980 ChiTaRS:NTHL1 CleanEx:MM_NTHL1
Genevestigator:O35980 GermOnline:ENSMUSG00000041429 Uniprot:O35980
Length = 300
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/186 (23%), Positives = 90/186 (48%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R + T+ + + + + + +G++R + +++
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYI 177
Query: 176 LEGAKMIVA--EGDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLAR 232
+ ++ EGD P +V++L +PG+G A ++A+ + + VD +V R+ R
Sbjct: 178 KQTTAILQQRYEGD-IPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANR 236
Query: 233 L---KAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPV 289
L K ++ P++T KN + +++ S + N L+ G IC P++P C +C
Sbjct: 237 LRWTKKMTKTPEETR--KNLEEWLPRVLWS----EVNGLLVGFGQQICLPVHPRCQACLN 290
Query: 290 SDKCQA 295
C A
Sbjct: 291 KALCPA 296
>TIGR_CMR|GSU_1450 [details] [associations]
symbol:GSU_1450 "endonuclease III, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 GO:GO:0016798 KO:K10773
HOGENOM:HOG000252209 RefSeq:NP_952501.2 GeneID:2687781
KEGG:gsu:GSU1450 PATRIC:22025743 ProtClustDB:CLSK2306769
BioCyc:GSUL243231:GH27-1429-MONOMER Uniprot:Q74D69
Length = 218
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 43/188 (22%), Positives = 87/188 (46%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
+ V VS ++ +T+ +T R T + + S +++ + +G+Y +A +
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFALADTPAAMVRLSKDDIEKAIYPVGFYHTKAEQI 95
Query: 176 LEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVDGNVIRVLARLK 234
LE ++++ DG P+ + +L G+G TA + ++ F + VD +V R+ R
Sbjct: 96 LEICRVLLERYDGGVPDELDELLAFKGVGRKTANLVITLGFGKPGICVDTHVHRICNRWG 155
Query: 235 AI-SANPKDTS-TVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVSDK 292
I + P+ T +++ LV N L+ G CTP++P C++C ++
Sbjct: 156 YIRTKTPEQTEFSLRRILPHRYWLV-------INDYLVTFGQNHCTPVSPRCSTCVLAQW 208
Query: 293 CQAYSMSK 300
C ++K
Sbjct: 209 CDCVGVAK 216
>UNIPROTKB|Q2KID2 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 OMA:CLNQALC
EMBL:BC112681 IPI:IPI00689580 RefSeq:NP_001039862.1 UniGene:Bt.6550
ProteinModelPortal:Q2KID2 STRING:Q2KID2 PRIDE:Q2KID2
Ensembl:ENSBTAT00000049780 GeneID:535203 KEGG:bta:535203 CTD:4913
HOVERGEN:HBG052675 InParanoid:Q2KID2 OrthoDB:EOG4933JH
NextBio:20876660 Uniprot:Q2KID2
Length = 305
Score = 126 (49.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 43/185 (23%), Positives = 84/185 (45%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R + T+ + + + + +G++R + +++
Sbjct: 123 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDSTLGALIYPVGFWRSKVKYI 182
Query: 176 LEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ + ++ DG P +V++L +PG+G A ++A+ V + VD +V R+ RL
Sbjct: 183 KQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 242
Query: 234 ---KAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
K + +P++T W L +L + N L+ G C P+ P C +C
Sbjct: 243 RWTKKATKSPEETRRALEEW-LPRELWS-----EINGLLVGFGQQTCLPIRPRCQACLNR 296
Query: 291 DKCQA 295
C A
Sbjct: 297 ALCPA 301
>TIGR_CMR|CBU_1697 [details] [associations]
symbol:CBU_1697 "endonuclease III" species:227377
"Coxiella burnetii RSA 493" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_820678.1
ProteinModelPortal:Q83B22 SMR:Q83B22 PRIDE:Q83B22 GeneID:1209608
KEGG:cbu:CBU_1697 PATRIC:17932131 ProtClustDB:CLSK914967
BioCyc:CBUR227377:GJ7S-1668-MONOMER Uniprot:Q83B22
Length = 218
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 166 LGYYR-RARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPVVD 223
+G Y +A+ +++ K++V P T +L +PG+G TA I + AF E VD
Sbjct: 79 IGLYNTKAKNIIKTCKILVENYHSKVPRTREELEALPGVGRKTANVILNTAFGEHAIAVD 138
Query: 224 GNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPN 283
++ RV R A K V+ KL ++V D + L+ G IC P
Sbjct: 139 THIFRVANRTGL--ARGKTPLAVEK--KLM-EVVPKKYLADAHHWLVLHGRYICIARRPK 193
Query: 284 CTSCPVSDKCQ 294
C+ C ++D C+
Sbjct: 194 CSECLINDLCE 204
>TIGR_CMR|SO_2514 [details] [associations]
symbol:SO_2514 "endonuclease III" species:211586
"Shewanella oneidensis MR-1" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_718101.1
ProteinModelPortal:Q8EE75 SMR:Q8EE75 GeneID:1170225
KEGG:son:SO_2514 PATRIC:23524657 Uniprot:Q8EE75
Length = 231
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 43/174 (24%), Positives = 76/174 (43%)
Query: 147 TIHHLAKASLEEVNEMWAGLGYYR-RARFLLEGAKMIVAEGDG-FPNTVSDLRKVPGIGN 204
T H + +E + E +G Y +A +++ ++++ + +G P L +PG+G
Sbjct: 60 TAHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVGR 119
Query: 205 YTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGD 264
TA + + AF VD ++ R+ R K A K+ V+ + ++V + D
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRLANRTKF--APGKNVVEVE---ERMLKVVPAEFKVD 174
Query: 265 FNQSLMELGAVICTPLNPNCTSCPVSDKCQAYSMSKRDNSVLVTSYPMKVLKAR 318
+ + G C P C SC + D C+ S KR + KVLKA+
Sbjct: 175 VHHWFILHGRYTCLARKPRCGSCIIEDLCEYKSTLKR-RFTPKNKFTDKVLKAK 227
>UNIPROTKB|P78549 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IDA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0045008 "depyrimidination" evidence=TAS] Reactome:REACT_216
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 GO:GO:0045008 eggNOG:COG0177 GO:GO:0019104
KO:K10773 GO:GO:0006296 EMBL:AB014460 EMBL:AC005600
HOGENOM:HOG000252209 OMA:CLNQALC CTD:4913 HOVERGEN:HBG052675
OrthoDB:EOG4933JH EMBL:U79718 EMBL:AF498098 EMBL:AB001575
EMBL:U81285 EMBL:BC003014 EMBL:BC000391 EMBL:Y09687 IPI:IPI00001722
RefSeq:NP_002519.1 UniGene:Hs.66196 ProteinModelPortal:P78549
SMR:P78549 STRING:P78549 PhosphoSite:P78549 DMDM:29840795
PaxDb:P78549 PRIDE:P78549 Ensembl:ENST00000219066 GeneID:4913
KEGG:hsa:4913 UCSC:uc002col.1 GeneCards:GC16M002089 HGNC:HGNC:8028
HPA:CAB025152 MIM:602656 neXtProt:NX_P78549 PharmGKB:PA31811
InParanoid:P78549 PhylomeDB:P78549 GenomeRNAi:4913 NextBio:18903
ArrayExpress:P78549 Bgee:P78549 CleanEx:HS_NTHL1
Genevestigator:P78549 GermOnline:ENSG00000065057 Uniprot:P78549
Length = 312
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 42/185 (22%), Positives = 85/185 (45%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R + T+ + + + ++ +G++R + +++
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 189
Query: 176 LEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ + ++ G P +V++L +PG+G A ++A+ V + VD +V R+ RL
Sbjct: 190 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 234 ---KAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
K + +P++T W L +L + N L+ G C P++P C +C
Sbjct: 250 RWTKKATKSPEETRAALEEW-LPRELWH-----EINGLLVGFGQQTCLPVHPRCHACLNQ 303
Query: 291 DKCQA 295
C A
Sbjct: 304 ALCPA 308
>UNIPROTKB|E2QX23 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913 EMBL:AAEX03004629
RefSeq:XP_853674.1 Ensembl:ENSCAFT00000030911 GeneID:610981
KEGG:cfa:610981 Uniprot:E2QX23
Length = 312
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 42/185 (22%), Positives = 82/185 (44%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R T+ + + + + +G++R + +++
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRAHGLTVDSILQTDDATLGSLIYPVGFWRSKVKYI 189
Query: 176 LEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ + ++ G P +V++L +PG+G A ++A+ V + VD +V R+ RL
Sbjct: 190 KQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 234 K---AISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
+ + +P+ T W L +L G+ N L+ G C P+ P C +C
Sbjct: 250 RWTRTTTTSPEKTRAALEEW-LPRELW-----GEINGLLVGFGQQTCLPVRPRCGACLNR 303
Query: 291 DKCQA 295
C A
Sbjct: 304 SLCPA 308
>TIGR_CMR|SPO_3581 [details] [associations]
symbol:SPO_3581 "endonuclease III" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_168776.1
ProteinModelPortal:Q5LMI2 SMR:Q5LMI2 GeneID:3196325
KEGG:sil:SPO3581 PATRIC:23380639 ProtClustDB:CLSK934216
Uniprot:Q5LMI2
Length = 214
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 157 EEVNEMWAGLGYYR-RARFLLEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIA 214
E V E +G +R +A+ +++ ++++V + G PN+ + L+ +PG+G TA + ++
Sbjct: 74 EGVTEHIKTIGLFRQKAKNVIKLSRILVEQYGGEVPNSRAALQSLPGVGRKTANVVLNMW 133
Query: 215 FKEVVPVVDGNVIRVLARLKAISANPKDTSTVKNFWKLATQLVDSCRPGDFNQS----LM 270
++ VD ++ RV R KD TV+ + ++ P DF Q L+
Sbjct: 134 WRIPAQAVDTHIFRVGNRTGICPG--KDVDTVE-------RAIEDNIPADFQQHAHHWLI 184
Query: 271 ELGAVICTPLNPNCTSCPVSDKCQ 294
G C P C +C + D CQ
Sbjct: 185 LHGRYHCKARKPMCGTCLIRDLCQ 208
>UNIPROTKB|F1RFB3 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019104 "DNA N-glycosylase activity" evidence=IEA]
[GO:0006296 "nucleotide-excision repair, DNA incision, 5'-to
lesion" evidence=IEA] [GO:0006285 "base-excision repair, AP site
formation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690
GO:GO:0004519 GO:GO:0003906 GO:GO:0019104 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC
EMBL:FP102350 Ensembl:ENSSSCT00000008810 Uniprot:F1RFB3
Length = 313
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 43/185 (23%), Positives = 81/185 (43%)
Query: 117 YGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEVNEMWAGLGYYR-RARFL 175
Y V +S ++ QT+ Q R T+ + + + + +G++R + +++
Sbjct: 131 YQVLLSLMLSSQTKDQVTAGAMQRLRAHGLTVDSILQMDDSTLGTLIYPVGFWRSKVKYI 190
Query: 176 LEGAKMIVAE-GDGFPNTVSDLRKVPGIGNYTAGAIASIAFKEVVPV-VDGNVIRVLARL 233
+ + ++ G P +V +L +PG+G A ++A+ V + VD +V R+ RL
Sbjct: 191 KQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIAGRL 250
Query: 234 K---AISANPKDTSTVKNFWKLATQLVDSCRPGDFNQSLMELGAVICTPLNPNCTSCPVS 290
K + +P+ T T W L +L + N L+ G C P+ P C +C
Sbjct: 251 KWTKKATKSPEKTRTALEEW-LPRELWS-----EINGLLVGFGQQTCLPVRPRCQACLNR 304
Query: 291 DKCQA 295
C A
Sbjct: 305 ALCPA 309
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 498 447 0.00091 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 625 (66 KB)
Total size of DFA: 301 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.94u 0.09s 34.03t Elapsed: 00:00:02
Total cpu time: 33.95u 0.09s 34.04t Elapsed: 00:00:02
Start: Mon May 20 23:06:59 2013 End: Mon May 20 23:07:01 2013