Query 010877
Match_columns 498
No_of_seqs 202 out of 391
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 16:08:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 98.6 5.1E-08 1.7E-12 95.7 7.6 199 2-268 56-264 (279)
2 3hve_A Gigaxonin; ubiquitin, c 98.4 1.3E-07 4.4E-12 91.6 5.4 130 2-160 52-186 (256)
3 2vkp_A BTB/POZ domain-containi 98.3 5.8E-07 2E-11 75.6 6.3 76 2-86 33-108 (109)
4 1buo_A POZ domain, protein (pr 98.3 7.3E-07 2.5E-11 77.0 6.2 72 2-86 49-120 (121)
5 3htm_A Speckle-type POZ protei 98.3 1.4E-06 4.6E-11 78.7 7.6 106 2-124 55-163 (172)
6 3b84_A Zinc finger and BTB dom 98.3 6.4E-07 2.2E-11 77.3 4.9 73 2-86 45-117 (119)
7 2if5_A Zinc finger and BTB dom 98.3 9.3E-07 3.2E-11 75.9 5.7 75 2-84 46-120 (120)
8 2vpk_A Myoneurin; transcriptio 98.2 1.6E-06 5.4E-11 74.1 6.3 72 2-85 43-116 (116)
9 1r29_A B-cell lymphoma 6 prote 98.2 2.7E-06 9.2E-11 73.8 6.8 75 2-85 50-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 98.1 2.2E-06 7.6E-11 76.7 5.8 74 2-83 68-143 (144)
11 2yy9_A Zinc finger and BTB dom 98.1 1.1E-06 3.9E-11 77.6 3.7 74 2-87 46-119 (135)
12 4eoz_A Speckle-type POZ protei 98.1 8.8E-07 3E-11 77.8 2.3 94 2-112 46-139 (145)
13 3ga1_A Nucleus accumbens-assoc 98.1 1.1E-06 3.8E-11 76.7 2.8 73 2-86 54-127 (129)
14 2z8h_A Transcription regulator 98.1 4.4E-06 1.5E-10 73.8 6.7 76 2-87 57-133 (138)
15 2q81_A MIZ-1 protein; BTB/POZ 98.1 2.2E-06 7.7E-11 73.8 4.5 70 2-84 48-117 (119)
16 3ohu_A Transcription regulator 98.0 2.7E-06 9.2E-11 73.6 3.0 63 2-68 53-116 (125)
17 2ihc_A Transcription regulator 97.8 6.4E-06 2.2E-10 71.4 2.4 73 2-84 50-123 (124)
18 3m5b_A Zinc finger and BTB dom 97.7 1.7E-05 6E-10 68.9 4.1 57 21-85 61-117 (119)
19 3hqi_A Speckle-type POZ protei 97.7 2.9E-05 9.8E-10 77.1 6.1 106 2-124 195-303 (312)
20 3fkc_A Transcriptional regulat 97.7 3E-05 1E-09 66.7 4.6 60 2-68 52-112 (116)
21 4ajy_C Transcription elongatio 96.4 0.005 1.7E-07 51.6 5.9 62 2-65 22-96 (97)
22 2ast_A S-phase kinase-associat 95.9 0.005 1.7E-07 56.0 4.0 79 2-88 21-127 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 92.3 0.12 4.3E-06 46.0 4.6 74 2-87 22-121 (141)
24 2p1m_A SKP1-like protein 1A; F 92.0 0.048 1.6E-06 49.7 1.5 75 2-87 24-125 (160)
25 2yy0_A C-MYC-binding protein; 86.2 1.2 3.9E-05 33.8 5.1 35 410-444 17-51 (53)
26 3v7d_A Suppressor of kinetocho 83.5 1.4 4.8E-05 40.4 5.4 78 2-87 27-133 (169)
27 2fnj_C Transcription elongatio 81.8 0.86 2.9E-05 38.0 3.0 63 2-66 21-96 (96)
28 3vmx_A Voltage-gated hydrogen 81.0 2.9 9.8E-05 31.1 5.2 36 412-447 4-39 (48)
29 1deb_A APC protein, adenomatou 74.9 5.8 0.0002 29.8 5.3 38 409-446 14-51 (54)
30 1hv2_A Elongin C, ELC1; protei 74.8 1.6 5.4E-05 36.6 2.6 62 2-66 24-99 (99)
31 3a2a_A Voltage-gated hydrogen 68.6 7.4 0.00025 29.7 4.7 34 414-447 13-46 (58)
32 1vcb_B Protein (elongin C); tu 65.6 2.4 8.3E-05 36.4 1.8 63 2-66 37-112 (112)
33 3vp9_A General transcriptional 64.9 7.1 0.00024 32.8 4.4 27 418-444 49-75 (92)
34 1pd7_B MAD1; PAH2, SIN3, eukar 39.7 10 0.00035 24.7 1.0 17 52-68 3-19 (26)
35 1dip_A Delta-sleep-inducing pe 39.4 29 0.00099 28.0 3.9 33 409-441 12-44 (78)
36 3i00_A HIP-I, huntingtin-inter 34.7 53 0.0018 28.6 5.2 18 409-426 19-36 (120)
37 2wt7_B Transcription factor MA 34.0 62 0.0021 27.0 5.2 35 411-445 54-88 (90)
38 4dzn_A Coiled-coil peptide CC- 30.7 1.1E+02 0.0039 20.3 5.0 27 413-439 3-29 (33)
39 1ci6_A Transcription factor AT 29.9 84 0.0029 24.1 5.1 28 413-440 31-58 (63)
40 2w6a_A ARF GTPase-activating p 28.7 44 0.0015 25.9 3.1 27 413-439 35-61 (63)
41 1nkp_B MAX protein, MYC proto- 25.9 93 0.0032 24.7 4.9 34 412-445 47-80 (83)
42 2yy0_A C-MYC-binding protein; 24.9 79 0.0027 23.6 3.9 29 407-435 21-49 (53)
43 3qh9_A Liprin-beta-2; coiled-c 24.5 99 0.0034 25.3 4.7 24 411-434 18-41 (81)
44 1use_A VAsp, vasodilator-stimu 23.3 1E+02 0.0036 22.5 4.1 23 420-442 8-31 (45)
45 2xv5_A Lamin-A/C; structural p 20.8 1.3E+02 0.0044 24.0 4.7 28 417-444 3-30 (74)
46 1ci6_A Transcription factor AT 20.0 2E+02 0.0069 21.9 5.5 33 413-445 24-56 (63)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.61 E-value=5.1e-08 Score=95.73 Aligned_cols=199 Identities=11% Similarity=0.166 Sum_probs=133.3
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCC----CCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENF----PGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLIS 77 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~df----PGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ 77 (498)
++|.||+.++...-.+.....|.|+++ .-.+++|+.+.+|+|+..+++++.||..|..||.+|+|.+ |..
T Consensus 56 a~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~ 129 (279)
T 3i3n_A 56 AATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKE 129 (279)
T ss_dssp HHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHH
T ss_pred HcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHH
Confidence 478999999874322213457889876 4578999999999999999999999999999999999986 999
Q ss_pred HHHHHhhhhhccChHHHHHHHhhhhcccchhhhhh---hHHHHHHHHHHhhccCCccccccccCCCcchhcccccChhHH
Q 010877 78 KTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHF 154 (498)
Q Consensus 78 ktE~fL~~vvl~sW~dsi~vLksCe~Llp~AE~l~---iv~RCidsia~ka~~~~~~~~~~~~~~dWW~eDl~~L~id~f 154 (498)
.++.||.+.+-. ..|-.++.+|+..+ +...|.+-|+..... + +--++...|+.+..
T Consensus 130 ~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l 188 (279)
T 3i3n_A 130 FCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAADMIRRNFHK-------V-----IQDEEFYTLPFHLI 188 (279)
T ss_dssp HHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-------H-----TTSSGGGGSCHHHH
T ss_pred HHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hcCcChhcCCHHHH
Confidence 999999885422 24555556666655 677888877654311 0 11256678888877
Q ss_pred HHHHHHHHhcC--CC-chhHHHHHHHHHHHhcCCCccccccccCCCCCCcchhHhhhccCccccccchhhHHHHHHHHHH
Q 010877 155 MRIITTIKVKG--TK-PEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVN 231 (498)
Q Consensus 155 ~rvi~am~~kg--~~-~~~I~~~l~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~llEtiV~ 231 (498)
..++.. -. +. .+.|-.+++.|++.-. .+.+..+..+..
T Consensus 189 ~~lL~~---d~L~v~sE~~vf~av~~W~~~~~------------------------------------~~r~~~~~~ll~ 229 (279)
T 3i3n_A 189 RDWLSD---LEITVDSEEVLFETVLKWVQRNA------------------------------------EERERYFEELFK 229 (279)
T ss_dssp HHHHTC---SSCCCSCHHHHHHHHHHHHHTTH------------------------------------HHHTTTHHHHHT
T ss_pred HHHhcC---cCCCCCCHHHHHHHHHHHHHcCH------------------------------------HHHHHHHHHHHH
Confidence 766653 32 33 4456666655543110 011122333333
Q ss_pred hcCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010877 232 LLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKR 268 (498)
Q Consensus 232 lLP~ek~~vsc~FL~~LLR~A~~l~as~~cr~~LEkR 268 (498)
.+ -=..+|..+|..+++..-.+..++.|+.-+..-
T Consensus 230 ~V--Rf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea 264 (279)
T 3i3n_A 230 LL--RLSQMKPTYLTRHVKPERLVANNEVCVKLVADA 264 (279)
T ss_dssp TS--CGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHH
T ss_pred hc--CCCCCCHHHHHHHhhccchhcCCHHHHHHHHHH
Confidence 22 124588999999999888889999998877543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.45 E-value=1.3e-07 Score=91.60 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=92.6
Q ss_pred ccccHHHHHhcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHH
Q 010877 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (498)
Q Consensus 2 Sksg~l~rli~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~kt 79 (498)
++|.||+.++..... +.....|.|+|++ +++|+.+.+|+|+..+++++.||..+..||.+|+|.+ |....
T Consensus 52 a~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c 123 (256)
T 3hve_A 52 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 123 (256)
T ss_dssp TTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHH
T ss_pred HcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHH
Confidence 579999999874321 1134578888875 8999999999999999999999999999999999996 99999
Q ss_pred HHHhhhhhccChHHHHHHHhhhhcccchhhhhh---hHHHHHHHHHHhhccCCccccccccCCCcchhcccccChhHHHH
Q 010877 80 EAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR 156 (498)
Q Consensus 80 E~fL~~vvl~sW~dsi~vLksCe~Llp~AE~l~---iv~RCidsia~ka~~~~~~~~~~~~~~dWW~eDl~~L~id~f~r 156 (498)
+.||.+.+-. ..|-.++.+|+..+ +...|.+-|+.....= +--++...|+.+....
T Consensus 124 ~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v------------~~~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 124 CEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETHFRDV------------SSTEEFLELSPQKLKE 182 (256)
T ss_dssp HHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TTCHHHHSSCHHHHHH
T ss_pred HHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH------------hCCcchhcCCHHHHHH
Confidence 9999986532 23444555565554 6677877776543110 0125677888888887
Q ss_pred HHHH
Q 010877 157 IITT 160 (498)
Q Consensus 157 vi~a 160 (498)
++..
T Consensus 183 lL~~ 186 (256)
T 3hve_A 183 VISL 186 (256)
T ss_dssp HHHC
T ss_pred HHcc
Confidence 7764
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.34 E-value=5.8e-07 Score=75.60 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=63.4
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.||++++...-.+.. ..|.|+|++ +++|+.+.+|+|+..+.+++.||..|..+|++++|.+ |...++.
T Consensus 33 ~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~ 103 (109)
T 2vkp_A 33 VGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVN 103 (109)
T ss_dssp HHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 489999999975432213 678888774 8999999999999999999999999999999999996 9999999
Q ss_pred Hhhhh
Q 010877 82 FLTLV 86 (498)
Q Consensus 82 fL~~v 86 (498)
||.+.
T Consensus 104 ~l~~~ 108 (109)
T 2vkp_A 104 FLETS 108 (109)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99763
No 4
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.31 E-value=7.3e-07 Score=77.03 Aligned_cols=72 Identities=18% Similarity=0.278 Sum_probs=64.7
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.|++.++.. +...|.|+|++ +++|+.+.+|+|+..+.+++.|+..|..||++++|.+ |....+.
T Consensus 49 a~S~yF~~~f~~-----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~ 115 (121)
T 1buo_A 49 CTSKMFEILFHR-----NSQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK 115 (121)
T ss_dssp HHCHHHHHHTTS-----CCSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred hcCHHHHHHHcC-----CCcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHH
Confidence 589999999874 23478898886 8999999999999999999999999999999999986 9999999
Q ss_pred Hhhhh
Q 010877 82 FLTLV 86 (498)
Q Consensus 82 fL~~v 86 (498)
||.+.
T Consensus 116 ~l~~~ 120 (121)
T 1buo_A 116 MLETI 120 (121)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 5
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.28 E-value=1.4e-06 Score=78.75 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=82.1
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.||++++...-.......|.|+|++ +++|+.+.+|+|+..+.+++.|+..|..+|++++|.+ |...++.
T Consensus 55 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 126 (172)
T 3htm_A 55 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 126 (172)
T ss_dssp HHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 5799999999854322244688998875 8999999999999999999999999999999999986 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhhcccchhhhhh---hHHHHHHHHHHh
Q 010877 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWK 124 (498)
Q Consensus 82 fL~~vvl~sW~dsi~vLksCe~Llp~AE~l~---iv~RCidsia~k 124 (498)
||.+.+ +-. .|-.++.+|+..+ +...|.+-|+..
T Consensus 127 ~l~~~l--~~~-------n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 127 ALCSNL--SVE-------NAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp HHHHTC--CTT-------THHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHhC--CHH-------HHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 999744 222 3333444555443 667787777653
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.26 E-value=6.4e-07 Score=77.27 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=63.0
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.|++.++.... ...|.|+|++ +++|+.+.+|+|+..+++++.||..|..||++++|.+ |....+.
T Consensus 45 a~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~ 112 (119)
T 3b84_A 45 CCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQS 112 (119)
T ss_dssp HHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred hcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 57999999997533 3478888887 8999999999999999999999999999999999986 9999999
Q ss_pred Hhhhh
Q 010877 82 FLTLV 86 (498)
Q Consensus 82 fL~~v 86 (498)
||.+.
T Consensus 113 ~l~~~ 117 (119)
T 3b84_A 113 FKPKT 117 (119)
T ss_dssp CC---
T ss_pred HHHHc
Confidence 99763
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.25 E-value=9.3e-07 Score=75.85 Aligned_cols=75 Identities=12% Similarity=0.288 Sum_probs=62.5
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.|++.++...-.+.....|.|+|++ +++|+.+.+|+|+..+.+++.|+..|..||.+++|.+ |....+.
T Consensus 46 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~ 117 (120)
T 2if5_A 46 ACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCAD 117 (120)
T ss_dssp HHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 4799999998754322234578888765 8999999999999999999999999999999999997 9999999
Q ss_pred Hhh
Q 010877 82 FLT 84 (498)
Q Consensus 82 fL~ 84 (498)
||+
T Consensus 118 ~L~ 120 (120)
T 2if5_A 118 LLD 120 (120)
T ss_dssp HHC
T ss_pred HhC
Confidence 884
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.22 E-value=1.6e-06 Score=74.12 Aligned_cols=72 Identities=18% Similarity=0.346 Sum_probs=61.2
Q ss_pred ccccHHHHHhcCCCCCCCccceeec--CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~--dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~kt 79 (498)
++|.|++.++...+ ...|.|+ |+ .+++|+.+.+|+|+..+.+++.||..|..||++++|.+ |....
T Consensus 43 a~S~yF~~~f~~~~----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C 110 (116)
T 2vpk_A 43 SFSEYFGAIYRSTS----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKC 110 (116)
T ss_dssp HHCHHHHHHHTTCC----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred hcCHHHHHHHcCCC----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 57999999997642 2356665 55 58999999999999999999999999999999999986 99999
Q ss_pred HHHhhh
Q 010877 80 EAFLTL 85 (498)
Q Consensus 80 E~fL~~ 85 (498)
+.||.+
T Consensus 111 ~~~l~~ 116 (116)
T 2vpk_A 111 KIKMED 116 (116)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999853
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.17 E-value=2.7e-06 Score=73.80 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=65.1
Q ss_pred ccccHHHHHhcCCCCCCCccceee-cCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L-~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE 80 (498)
++|.||+.++.....+ ....|.| +|+ .+++|+.+.+|+|+..+.+++.|+..|..||.+++|.+ |....+
T Consensus 50 a~S~~F~~~f~~~~~e-~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~ 120 (127)
T 1r29_A 50 ACSGLFYSIFTDQLKR-NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCR 120 (127)
T ss_dssp HHCHHHHHHHTSTTTT-TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HhCHHHHHHhcCCccC-CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 5799999999854332 4557888 666 48999999999999999999999999999999999996 999999
Q ss_pred HHhhh
Q 010877 81 AFLTL 85 (498)
Q Consensus 81 ~fL~~ 85 (498)
.||.+
T Consensus 121 ~~l~~ 125 (127)
T 1r29_A 121 KFIKA 125 (127)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99875
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.14 E-value=2.2e-06 Score=76.66 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=62.6
Q ss_pred ccccHHHHHhcCCCCC--CCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHH
Q 010877 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (498)
Q Consensus 2 Sksg~l~rli~~~~~~--~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~kt 79 (498)
++|.||+.++...-.. .....|.|+|++ +++|+.+.+|+|...+.+++.||..|..||.+|+|.+ |...+
T Consensus 68 a~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C 139 (144)
T 2ppi_A 68 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 139 (144)
T ss_dssp HHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred HcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 4799999999743211 134578888876 9999999999999999999999999999999999986 88888
Q ss_pred HHHh
Q 010877 80 EAFL 83 (498)
Q Consensus 80 E~fL 83 (498)
+.||
T Consensus 140 ~~~L 143 (144)
T 2ppi_A 140 CEFL 143 (144)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 8887
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.13 E-value=1.1e-06 Score=77.56 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=62.0
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.||+.++.... ...|.|+|++ +++|+.+.+|+|+..+++++.||..|..||+||+|.+ |....+.
T Consensus 46 a~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~ 113 (135)
T 2yy9_A 46 CCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQS 113 (135)
T ss_dssp HHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47899999987532 3478898887 8999999999999999999999999999999999986 9999999
Q ss_pred Hhhhhh
Q 010877 82 FLTLVI 87 (498)
Q Consensus 82 fL~~vv 87 (498)
||.+..
T Consensus 114 ~l~~~l 119 (135)
T 2yy9_A 114 FQPQTS 119 (135)
T ss_dssp CCC---
T ss_pred HHHHhc
Confidence 997744
No 12
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.10 E-value=8.8e-07 Score=77.77 Aligned_cols=94 Identities=11% Similarity=0.074 Sum_probs=62.9
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.||+.++...-.+.....|.|+|++ +++|+.+.+|+|+..+++++.|+..+..+|++++|.+ |...++.
T Consensus 46 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 117 (145)
T 4eoz_A 46 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 117 (145)
T ss_dssp HHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHC
T ss_pred HcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999753221133578888874 8999999999999999999999999999999999986 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhhcccchhhhhh
Q 010877 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ 112 (498)
Q Consensus 82 fL~~vvl~sW~dsi~vLksCe~Llp~AE~l~ 112 (498)
||.+.+- ...|-.++-+|+..+
T Consensus 118 ~l~~~l~---------~~n~~~~l~~A~~~~ 139 (145)
T 4eoz_A 118 ALCSNLS---------VENAAEILILADLHS 139 (145)
T ss_dssp C------------------------------
T ss_pred HHHHhCC---------HHHHHHHHHHHHHhC
Confidence 9986441 235555666666554
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.09 E-value=1.1e-06 Score=76.68 Aligned_cols=73 Identities=23% Similarity=0.405 Sum_probs=57.0
Q ss_pred ccccHHHHHhcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE 80 (498)
++|.|++.++... ....|.|+ |++ +++|+.+.+|+|+..+++++.||..|..||.+|+|.+ |...++
T Consensus 54 a~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~ 121 (129)
T 3ga1_A 54 ASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGT 121 (129)
T ss_dssp HHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--
T ss_pred HcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 4799999999864 23478885 665 8999999999999999999999999999999999997 788888
Q ss_pred HHhhhh
Q 010877 81 AFLTLV 86 (498)
Q Consensus 81 ~fL~~v 86 (498)
.||.++
T Consensus 122 ~~L~~~ 127 (129)
T 3ga1_A 122 EFFLKV 127 (129)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 888764
No 14
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.09 E-value=4.4e-06 Score=73.78 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=64.9
Q ss_pred ccccHHHHHhcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE 80 (498)
++|.||+.++..... +...|.|. +++ +++|+.+.+|+|+..+.+++.||..|..||++|+|.+ |....+
T Consensus 57 a~S~yF~~~f~~~~~--e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~ 126 (138)
T 2z8h_A 57 ACSSYFHSRIVGQTD--AELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCF 126 (138)
T ss_dssp HHCHHHHHHHTTCCC--TTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHH
T ss_pred HcCHHHHHHHhcCCC--CCceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 589999999975432 23467773 554 8999999999999999999999999999999999997 999999
Q ss_pred HHhhhhh
Q 010877 81 AFLTLVI 87 (498)
Q Consensus 81 ~fL~~vv 87 (498)
.||.+.+
T Consensus 127 ~~l~~~l 133 (138)
T 2z8h_A 127 QFLKFKF 133 (138)
T ss_dssp HHTTCCC
T ss_pred HHHHHhc
Confidence 9998754
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.09 E-value=2.2e-06 Score=73.83 Aligned_cols=70 Identities=19% Similarity=0.362 Sum_probs=61.0
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.|++.++... ...|.|+++ .+++|+.+.+|+|+.++++++.||..|..||++|+|.+ |....+.
T Consensus 48 a~S~yF~~~f~~~-----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~ 114 (119)
T 2q81_A 48 ACSEYFKMLFVDQ-----KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHA 114 (119)
T ss_dssp HHCHHHHHHHHHC-----CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 5799999999752 235666665 48999999999999999999999999999999999996 9999999
Q ss_pred Hhh
Q 010877 82 FLT 84 (498)
Q Consensus 82 fL~ 84 (498)
||.
T Consensus 115 ~l~ 117 (119)
T 2q81_A 115 LKS 117 (119)
T ss_dssp HHT
T ss_pred HHh
Confidence 985
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.98 E-value=2.7e-06 Score=73.60 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=54.0
Q ss_pred ccccHHHHHhcCCCCCCCccceeecC-CCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcc
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE 68 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~d-fPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE 68 (498)
++|.|++.++..... +...|.|+| + .+++|+.+.+|+|+.++.+++.||..|..||++|+|.+
T Consensus 53 a~S~yF~~~f~~~~~--e~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 53 ACSEYFWQALVGQTK--NDLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN 116 (125)
T ss_dssp HHBHHHHHHHTTCCC--SSCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred HcCHHHHHHhcCCCC--CCcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence 479999999976432 244677766 5 48999999999999999999999999999999999986
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.81 E-value=6.4e-06 Score=71.44 Aligned_cols=73 Identities=18% Similarity=0.301 Sum_probs=58.4
Q ss_pred ccccHHHHHhcCCCCCCCccceee-cCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L-~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE 80 (498)
++|.|++.++..... +...|.| .++ .+++|+.+.+|+|+.++++++.||..|..||++++|.+ |....+
T Consensus 50 a~S~yF~~mf~~~~~--e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~ 119 (124)
T 2ihc_A 50 ACSSYFHSRIVGQAD--GELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCF 119 (124)
T ss_dssp HHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGG
T ss_pred HcCHHHHHHHcCCCC--CCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence 589999999975432 2346777 355 48999999999999999999999999999999999996 666666
Q ss_pred HHhh
Q 010877 81 AFLT 84 (498)
Q Consensus 81 ~fL~ 84 (498)
.||.
T Consensus 120 ~~l~ 123 (124)
T 2ihc_A 120 QFLK 123 (124)
T ss_dssp GTC-
T ss_pred HHHh
Confidence 6653
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.75 E-value=1.7e-05 Score=68.85 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=50.7
Q ss_pred cceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHHHhhh
Q 010877 21 YDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 85 (498)
Q Consensus 21 ~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~fL~~ 85 (498)
..|.|+|++ +++|+.+..|+|++.++|+..||..|..||.+|+|.+ |....+.++.+
T Consensus 61 ~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 61 QWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp EEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred CEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 468888876 8999999999999999999999999999999999996 88888888764
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.74 E-value=2.9e-05 Score=77.06 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=82.9
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcccccCCchHHHHHH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMTE~~~~gNLi~ktE~ 81 (498)
++|.||+.++...-.+....+|.|+|++ +++|+...+|+|+..+.++..|+..|..||++++|.. |...+|.
T Consensus 195 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 266 (312)
T 3hqi_A 195 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 266 (312)
T ss_dssp HHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999998754322245689999975 8999999999999999999999999999999999985 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhhcccchhhhh---hhHHHHHHHHHHh
Q 010877 82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWK 124 (498)
Q Consensus 82 fL~~vvl~sW~dsi~vLksCe~Llp~AE~l---~iv~RCidsia~k 124 (498)
||.+.+-. .+|-.++.+|+.. .+...|++-|+..
T Consensus 267 ~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 267 ALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99864321 3444555666665 4778899888754
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.68 E-value=3e-05 Score=66.69 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=53.3
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCcc-ccCCcchHHHHhhHhhhcCcc
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPNNIAPLRCASEFLDMSE 68 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i-~lt~~NVa~LrCAAeyLeMTE 68 (498)
++|.|++.++... ...|.|+|++ +++|+.+.+|+|+.++ ++++.|+..|..||++|+|..
T Consensus 52 a~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 52 ASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 5789999998753 3478888886 8999999999999999 799999999999999999974
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.37 E-value=0.005 Score=51.57 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=47.5
Q ss_pred ccccHHHHHhcCCCC--CCCccceeecCCCCChHHHHHHHHhhc-----C---Cccc---cCCcchHHHHhhHhhhc
Q 010877 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---FNPNNIAPLRCASEFLD 65 (498)
Q Consensus 2 Sksg~l~rli~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCY-----G---~~i~---lt~~NVa~LrCAAeyLe 65 (498)
..|++|+.++....+ +.....|.|++++ +.+++++..||| . ..|. |++.|+--|-.||.||+
T Consensus 22 ~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 22 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp TTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 469999999986332 1124578887775 789999999999 3 4555 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.92 E-value=0.005 Score=56.03 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=62.2
Q ss_pred ccccHHHHHhcCCC-C-CCCccceeecCCCCChHHHHHHHHhhcCCc--------------------------cccCCcc
Q 010877 2 SKCGYIARLELQPS-I-SNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNN 53 (498)
Q Consensus 2 Sksg~l~rli~~~~-~-~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~N 53 (498)
+.|++|+.++.... . ......|.|++++ +.+++++..|||-.. +.++..|
T Consensus 21 ~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~ 98 (159)
T 2ast_A 21 KQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGT 98 (159)
T ss_dssp HTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHH
T ss_pred HHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHH
Confidence 46999999997632 1 1133478888875 579999999999655 7899999
Q ss_pred hHHHHhhHhhhcCcccccCCchHHHHHHHhhhhhc
Q 010877 54 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL 88 (498)
Q Consensus 54 Va~LrCAAeyLeMTE~~~~gNLi~ktE~fL~~vvl 88 (498)
+--|--||.||+|.. |+.-+-.|+...+-
T Consensus 99 l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 99 LFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 999999999999986 99999999987553
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=92.31 E-value=0.12 Score=45.96 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=60.5
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc--------------------------cccCCcchH
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNNIA 55 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~NVa 55 (498)
..|++|+.++.... ...|.|++++ +.+++.+..|||--. +.++..++-
T Consensus 22 ~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~ 95 (141)
T 1fs1_B 22 KQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF 95 (141)
T ss_dssp GTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred HHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence 57999999997643 2368888885 579999999999532 778999999
Q ss_pred HHHhhHhhhcCcccccCCchHHHHHHHhhhhh
Q 010877 56 PLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (498)
Q Consensus 56 ~LrCAAeyLeMTE~~~~gNLi~ktE~fL~~vv 87 (498)
-|--||.||++.. |+.-+-.|+...+
T Consensus 96 eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 96 ELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 9999999999985 8888888887654
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=92.04 E-value=0.048 Score=49.72 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=41.4
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc---------------------------cccCCcch
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------------------IAFNPNNI 54 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~---------------------------i~lt~~NV 54 (498)
..|++|+.++.... ....|.|++++| .+++.+..|||--. +.++..++
T Consensus 24 ~~S~~ik~ml~~~~---~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l 98 (160)
T 2p1m_A 24 LESQTIAHMVEDDC---VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL 98 (160)
T ss_dssp HTCTTTC---------------CCTTSCH--HHHHHHHHC----------------------------------------
T ss_pred HHhHHHHHHHHccC---CCCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHH
Confidence 36888999886542 223677788775 89999999999743 57899999
Q ss_pred HHHHhhHhhhcCcccccCCchHHHHHHHhhhhh
Q 010877 55 APLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (498)
Q Consensus 55 a~LrCAAeyLeMTE~~~~gNLi~ktE~fL~~vv 87 (498)
--|--||.||+|.. |+.-+-.|+...+
T Consensus 99 ~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 99 FELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 99999999999985 9988888887755
No 25
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=86.23 E-value=1.2 Score=33.82 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=31.1
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010877 410 TSIEIKNLREELENVKTRMAELQKDYSELQREYEK 444 (498)
Q Consensus 410 ~~rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k 444 (498)
..-|.+.||.|++.+|.++.+|.+++..++.++++
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35689999999999999999999999999988764
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=83.51 E-value=1.4 Score=40.42 Aligned_cols=78 Identities=8% Similarity=0.119 Sum_probs=54.2
Q ss_pred ccccHHHHHhcCCCCC----CCccceeecCCCCChHHHHHHHHhhcCCc-------------------------cccCCc
Q 010877 2 SKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP-------------------------IAFNPN 52 (498)
Q Consensus 2 Sksg~l~rli~~~~~~----~~~~~i~L~dfPGGaeaFEl~akFCYG~~-------------------------i~lt~~ 52 (498)
..|+.|+.++...... .+...|-|++++ +.+++.|..|||--. +.+.+.
T Consensus 27 ~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~ 104 (169)
T 3v7d_A 27 ERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQE 104 (169)
T ss_dssp TTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHH
T ss_pred HHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHH
Confidence 4689999999864431 122578888876 589999999998521 356667
Q ss_pred chHHHHhhHhhhcCcccccCCchHHHHHHHhhhhh
Q 010877 53 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (498)
Q Consensus 53 NVa~LrCAAeyLeMTE~~~~gNLi~ktE~fL~~vv 87 (498)
.+--|-.||.||++.. |+.-+=.++...+
T Consensus 105 ~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 105 MLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp HHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 7788999999999985 7666666555433
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=81.78 E-value=0.86 Score=37.95 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=45.8
Q ss_pred ccccHHHHHhcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCC-----------ccccCCcchHHHHhhHhhhcC
Q 010877 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (498)
Q Consensus 2 Sksg~l~rli~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~lt~~NVa~LrCAAeyLeM 66 (498)
..|++|+.++..... +.....|-|++++ +.+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 21 ~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 21 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp TTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 468999999986432 1123468888776 46999999999842 146888889999999999974
No 28
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=81.04 E-value=2.9 Score=31.15 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=31.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 010877 412 IEIKNLREELENVKTRMAELQKDYSELQREYEKLSN 447 (498)
Q Consensus 412 rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~~~ 447 (498)
+-+-.||.--+.+=++|.+||..|..+.||++++.+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 345678888889999999999999999999998864
No 29
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=74.90 E-value=5.8 Score=29.80 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=33.3
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010877 409 STSIEIKNLREELENVKTRMAELQKDYSELQREYEKLS 446 (498)
Q Consensus 409 ~~~rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~~ 446 (498)
.++.||-.||.||+.=...++.||.|-+.||..+..+.
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 45789999999999999999999999999997766543
No 30
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=74.81 E-value=1.6 Score=36.56 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=45.7
Q ss_pred ccccHHHHHhcCCCCCCCccceeecCCCCChHHHHHHHHhhcCC--------------ccccCCcchHHHHhhHhhhcC
Q 010877 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGL--------------PIAFNPNNIAPLRCASEFLDM 66 (498)
Q Consensus 2 Sksg~l~rli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~--------------~i~lt~~NVa~LrCAAeyLeM 66 (498)
..|+.|+.++...- .+....|-|++++| .+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 24 ~~S~~ik~ml~~~~-e~~~~~Iplp~V~~--~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 24 MISPTLKAMIEGPF-RESKGRIELKQFDS--HILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp TTCHHHHHHHHSST-TTCTTEEEETTSCH--HHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHhHHHHHHHhccc-ccCCCceecCCcCH--HHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 46899999997621 11334788888764 6999999999842 135677777888889999974
No 31
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=68.57 E-value=7.4 Score=29.70 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=28.2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 010877 414 IKNLREELENVKTRMAELQKDYSELQREYEKLSN 447 (498)
Q Consensus 414 ~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~~~ 447 (498)
...||.-=..+=.+|.+||-.|..|.||++++.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666667778999999999999999999875
No 32
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=65.56 E-value=2.4 Score=36.35 Aligned_cols=63 Identities=17% Similarity=0.250 Sum_probs=44.6
Q ss_pred ccccHHHHHhcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCC-----------ccccCCcchHHHHhhHhhhcC
Q 010877 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (498)
Q Consensus 2 Sksg~l~rli~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~lt~~NVa~LrCAAeyLeM 66 (498)
..|+.|+.++..... ......|-|++++| .+++++..|||=- .+.+.+..+--|--||.||++
T Consensus 37 ~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 37 LTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HTSHHHHHHSSCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHhcCCcccccCCceeCCCCCH--HHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 368999999976432 11234688887764 6999999999731 146777788889999999975
No 33
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=64.90 E-value=7.1 Score=32.81 Aligned_cols=27 Identities=15% Similarity=0.353 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010877 418 REELENVKTRMAELQKDYSELQREYEK 444 (498)
Q Consensus 418 k~el~~mr~rv~eLE~~c~~m~~~~~k 444 (498)
=.||+.||..|.|||..+..||+.++.
T Consensus 49 i~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 49 LAEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999987764
No 34
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=39.73 E-value=10 Score=24.69 Aligned_cols=17 Identities=35% Similarity=0.423 Sum_probs=14.4
Q ss_pred cchHHHHhhHhhhcCcc
Q 010877 52 NNIAPLRCASEFLDMSE 68 (498)
Q Consensus 52 ~NVa~LrCAAeyLeMTE 68 (498)
.||..|-=||||||=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 48999999999998544
No 35
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=39.43 E-value=29 Score=28.00 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=26.5
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010877 409 STSIEIKNLREELENVKTRMAELQKDYSELQRE 441 (498)
Q Consensus 409 ~~~rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~ 441 (498)
+.++|.+.||..+..+-.|+..||.|+.-+|+-
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345678889988888889999999998877653
No 36
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=34.73 E-value=53 Score=28.61 Aligned_cols=18 Identities=44% Similarity=0.545 Sum_probs=12.4
Q ss_pred cchHHHhhHHHHHHHHHH
Q 010877 409 STSIEIKNLREELENVKT 426 (498)
Q Consensus 409 ~~~rE~~~Lk~el~~mr~ 426 (498)
.+.+|++.||.++++++.
T Consensus 19 ~Lkreie~lk~ele~l~~ 36 (120)
T 3i00_A 19 RLYREISGLKAQLENMKT 36 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457788888888666544
No 37
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=33.98 E-value=62 Score=26.95 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=25.3
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010877 411 SIEIKNLREELENVKTRMAELQKDYSELQREYEKL 445 (498)
Q Consensus 411 ~rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~ 445 (498)
..|+..|..+++.|+....++.++-..|++.++.+
T Consensus 54 E~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 54 ENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44666777777777777777777777777777665
No 38
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=30.69 E-value=1.1e+02 Score=20.27 Aligned_cols=27 Identities=30% Similarity=0.527 Sum_probs=12.8
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010877 413 EIKNLREELENVKTRMAELQKDYSELQ 439 (498)
Q Consensus 413 E~~~Lk~el~~mr~rv~eLE~~c~~m~ 439 (498)
|+..||.|+..++..+.-|.=+.-.++
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555544444444444443
No 39
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.90 E-value=84 Score=24.05 Aligned_cols=28 Identities=32% Similarity=0.408 Sum_probs=13.1
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010877 413 EIKNLREELENVKTRMAELQKDYSELQR 440 (498)
Q Consensus 413 E~~~Lk~el~~mr~rv~eLE~~c~~m~~ 440 (498)
+.+.|+.+-..++.++..|++|...+++
T Consensus 31 ~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ 58 (63)
T 1ci6_A 31 ECKELEKKNEALKERADSLAKEIQYLKD 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444555554444443
No 40
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=28.67 E-value=44 Score=25.89 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=19.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010877 413 EIKNLREELENVKTRMAELQKDYSELQ 439 (498)
Q Consensus 413 E~~~Lk~el~~mr~rv~eLE~~c~~m~ 439 (498)
=|..|-.|+..|+..+..||.|-..++
T Consensus 35 VN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 35 VNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 356677777777777777777766655
No 41
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=25.89 E-value=93 Score=24.68 Aligned_cols=34 Identities=15% Similarity=0.272 Sum_probs=26.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010877 412 IEIKNLREELENVKTRMAELQKDYSELQREYEKL 445 (498)
Q Consensus 412 rE~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~ 445 (498)
.=+..|+.+.+.|+..+.+|.++...+++++..+
T Consensus 47 ~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 47 EYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3477788888888888888888888888877665
No 42
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=24.92 E-value=79 Score=23.63 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=22.0
Q ss_pred CCcchHHHhhHHHHHHHHHHHHHHHHHHH
Q 010877 407 QPSTSIEIKNLREELENVKTRMAELQKDY 435 (498)
Q Consensus 407 ~~~~~rE~~~Lk~el~~mr~rv~eLE~~c 435 (498)
...+++||.+||..++.++.++.||....
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44677888888888888888888887653
No 43
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=24.48 E-value=99 Score=25.28 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=20.6
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHH
Q 010877 411 SIEIKNLREELENVKTRMAELQKD 434 (498)
Q Consensus 411 ~rE~~~Lk~el~~mr~rv~eLE~~ 434 (498)
.+..+.|-.||..+|.||.|||.+
T Consensus 18 ~~~~E~L~qEi~~Lr~kv~elEnE 41 (81)
T 3qh9_A 18 QRKAEELLQELRHLKIKVEELENE 41 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456678999999999999999977
No 44
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=23.30 E-value=1e+02 Score=22.49 Aligned_cols=23 Identities=26% Similarity=0.570 Sum_probs=12.1
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHH
Q 010877 420 ELENVKTR-MAELQKDYSELQREY 442 (498)
Q Consensus 420 el~~mr~r-v~eLE~~c~~m~~~~ 442 (498)
+|+++|.. +.|+-+|...||++|
T Consensus 8 dle~~KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 8 DLQRVKQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444433 455556666666655
No 45
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=20.78 E-value=1.3e+02 Score=23.96 Aligned_cols=28 Identities=14% Similarity=0.323 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010877 417 LREELENVKTRMAELQKDYSELQREYEK 444 (498)
Q Consensus 417 Lk~el~~mr~rv~eLE~~c~~m~~~~~k 444 (498)
|..|.+..+..+.+||.+...++++|+.
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~ 30 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQ 30 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777777666666554
No 46
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=20.01 E-value=2e+02 Score=21.88 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=20.8
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010877 413 EIKNLREELENVKTRMAELQKDYSELQREYEKL 445 (498)
Q Consensus 413 E~~~Lk~el~~mr~rv~eLE~~c~~m~~~~~k~ 445 (498)
+...|..+++.+..+-.+|+.+...++.|+.-+
T Consensus 24 ~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~L 56 (63)
T 1ci6_A 24 EQEALTGECKELEKKNEALKERADSLAKEIQYL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666665543
Done!