BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010881
(498 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/485 (40%), Positives = 298/485 (61%), Gaps = 25/485 (5%)
Query: 2 KQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGD-LSHGYRLFVCLQYRTTFIWNTMI 60
+++KQI + + +G + D +A+ K + FC +S D L + +F TF+WN MI
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
RGF+ +EP ++ LY++ML S N YTF +L+AC++ S HAQ+ +LG+E
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
+ + +N L++ YA A LFD D +SW S+I GY K+G++ IA +F KM
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 181 PEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGR 240
EKNA+SW+ MI+GYVQ D+ KEAL+ F+ MQ P++ + AL+ACA LGAL+QG+
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 241 WIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHD 300
WIH+Y+++ I +D +LG +IDMYAKCG +E A VF ++ + V A+T+LISG A H
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 301 QSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQHY 336
AI FM MQ G+ PN SM Y ++P ++HY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 337 GCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSL 396
GC+VDLLGRAG+L+ AK+ ++EMP++P+ + GALL ACR+H +++LG+E E L+
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDP 447
Query: 397 DHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNV 456
H G +V +NI+A ++W+ + RR M++ V KVPGCS I ++G EF++G+R++
Sbjct: 448 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHP 507
Query: 457 LMEEI 461
+E+I
Sbjct: 508 EIEKI 512
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 302/516 (58%), Gaps = 43/516 (8%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIG--DLSHGYRLFVCLQYRTTFIWNT 58
++ + QI + SG + D A +I+ FC+ SD+ DL + +++F + R F WNT
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 59 MIRGFAEKNE--PIKAFALYKQMLRSDFL-PNNYTFSFILRACADTSCLFVGLICHAQVI 115
+IRGF+E +E + A L+ +M+ +F+ PN +TF +L+ACA T + G H +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 116 RLGWESYDFVLNGLLHLYATCNCMDPARKLF-------DMSVNRD-------VISWTSLI 161
+ G+ +FV++ L+ +Y C M AR LF DM V D ++ W +I
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 162 NGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHA 221
+GY + G AR +FDKM +++ VSW+ MI+GY FK+A+E F M+ RPN+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 222 GIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSM 281
+V L A + LG+L+ G W+H Y + +GI +D +LG+A+IDMY+KCG IE A VF+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 282 PNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE-------------------- 321
P +V ++++I+G A H Q+ AI+ F +M+ GV P++
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 322 ----SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRV 377
M + G+EP ++HYGC+VDLLGR+G+L+ A++ + MPI+PD+ + ALL ACR+
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 378 HGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCS 437
G+V++GK L++ G +V LSN+YAS W+ V ++R M++ ++RK PGCS
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 438 LIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLK 473
LI++DGV+ EFV + ++ +EI +L I L+
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 283/478 (59%), Gaps = 29/478 (6%)
Query: 4 IKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGD-----LSHGYRLFVCLQYRTTFIWNT 58
+K I L + + D F +++ C + L + Y +F +Q F++N
Sbjct: 28 LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87
Query: 59 MIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLG 118
+IR F+ EP KAF Y QML+S P+N TF F+++A ++ C+ VG H+Q++R G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 119 WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFD 178
+++ +V N L+H+YA C + A ++F RDV+SWTS++ GY K G + AR+MFD
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 179 KMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQ 238
+MP +N +WS MINGY + + F++A++ F +M+ G N +V +++CA LGAL+
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 239 GRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
G + YV ++ + +++ILGTA++DM+ +CG IE A VF+ +P D +++S+I GLA
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 299 HDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQ 334
H + A+ F +M G +P E+M + +GIEP ++
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 335 HYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVER 394
HYGC+VD+LGRAG L A+ + +M ++P+ +LGALL AC+++ + ++ + L++
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 395 SLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGE 452
+H G +VLLSNIYA QW+ +E +R M++ V+K PG SLIE+DG + +F G+
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 289/498 (58%), Gaps = 26/498 (5%)
Query: 2 KQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIR 61
K+++QI + L V GTL D VG + + SD L + ++ + T F N+MIR
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 62 GFAEKNEPIKAFALYKQMLRS--DFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
+ P K+F Y+++L S D P+NYT +F+++AC GL H IR G+
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
++ V GL+ LYA C+D K+F+ D + T+++ A+ G + AR++F+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
MPE++ ++W+AMI+GY QV +EAL F+ MQL G + N ++ L+AC LGALDQG
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
RW H+Y++RN I++ + L T ++D+YAKCG +E A VF M ++V+ ++S ++GLA +
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 300 DQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQH 335
+ELF M+ +GV PN +SM +GIEP ++H
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 336 YGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERS 395
YGCLVDL RAG LE A ++++MP++P V +LL+A R++ +++LG + ++E
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 396 LDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTN 455
+ G +VLLSNIYA + W+ V VR+ M+ VRK PGCS++EV+G V EF G++++
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 456 VLMEEIVLLLFGIDKHLK 473
+I + I + L+
Sbjct: 500 PKYTQIDAVWKDISRRLR 517
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 276/486 (56%), Gaps = 27/486 (5%)
Query: 5 KQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFA 64
K+I + + + G F V K++ FC I D+ + RLF + F++N++IR +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDK--IEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 65 EKNEPIKAFALYKQMLRSDF-LPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYD 123
+ +YKQ+LR F LP+ +TF F+ ++CA ++G H + + G +
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 124 FVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEK 183
N L+ +Y + + A K+FD RDVISW SL++GYA+ GQ+ A+ +F M +K
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 184 NAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIH 243
VSW+AMI+GY + + EA++ F MQL G P+ ++ L +CA LG+L+ G+WIH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 244 AYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSA 303
Y +R G + A+I+MY+KCG I A +F M +DV +++++ISG A H +
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 304 SAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQHYGCL 339
AIE F MQ V PN + M + Y IEP ++HYGCL
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Query: 340 VDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHE 399
+D+L RAG LE A ++ + MP++PD+ + G+LL++CR G++D+ ++ LVE +
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 400 GVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLME 459
G +VLL+NIYA +W V ++R+ + + ++K PG SLIEV+ +V EFVSG+ +
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWT 504
Query: 460 EIVLLL 465
EI ++L
Sbjct: 505 EISIVL 510
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 280/491 (57%), Gaps = 27/491 (5%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
M+++KQI + L +G + D +++ FC AS D+++ Y +F + ++ F+WNT+I
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASP-SDMNYAYLVFTRINHKNPFVWNTII 96
Query: 61 RGFAEKNEPIKAFALYKQMLRSD--FLPNNYTFSFILRACADTSCLFVGLICHAQVIRLG 118
RGF+ + P A +++ ML S P T+ + +A G H VI+ G
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 119 WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFD 178
E F+ N +LH+Y TC C+ A ++F + DV++W S+I G+AK G I A+ +FD
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 179 KMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQ 238
+MP++N VSW++MI+G+V+ FK+AL+ F MQ +P+ +V L ACA+LGA +Q
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 239 GRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
GRWIH Y+ RN EL+ I+ TA+IDMY KCGCIE +VF+ P + + + S+I GLAN
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 299 HDQSASAIELFMRMQLEGVVPNES------------------------MSEIYGIEPGVQ 334
+ A++LF ++ G+ P+ M E Y IEP ++
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 335 HYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVER 394
HY +V++LG AG+LE A+ +++ MP+E D + +LL+ACR G+V++ K + L +
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 395 SLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERT 454
D +VLLSN YAS + + R M++ ++ K GCS IEVD V EF+S T
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 455 NVLMEEIVLLL 465
+ EI LL
Sbjct: 517 HPKSAEIYSLL 527
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 278/469 (59%), Gaps = 40/469 (8%)
Query: 53 TFIWNTMIRGF------AEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFV 106
+F+WN +IR +++ PI ++Y +M P+ +TF F+L + + L +
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPI---SVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPL 80
Query: 107 GLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAK 166
G HAQ++ G + FV LL++Y++C + A+++FD S ++D+ +W S++N YAK
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 167 SGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG-----FRPNHA 221
+G I AR++FD+MPE+N +SWS +INGYV +KEAL+ F MQL RPN
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 222 GIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSM 281
+ L+AC LGAL+QG+W+HAY+D+ +E+DI+LGTA+IDMYAKCG +E A VF+++
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 282 -PNRDVFAYTSLISGLANHDQSASAIELFMRMQL-EGVVPN------------------- 320
+DV AY+++I LA + + +LF M + + PN
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 321 -----ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNAC 375
+ M E +GI P +QHYGC+VDL GR+G+++ A+ + MP+EPD + G+LL+
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 376 RVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPG 435
R+ GD+ + ++ L+E + G +VLLSN+YA T +W V+ +R ME + KVPG
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPG 440
Query: 436 CSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
CS +EV+GVV EFV G+ + E I +L I + L+ + D EV
Sbjct: 441 CSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEV 489
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQML-----RSDFLPNNYT 90
G + +LF + R W+ +I G+ + +A L+++M + PN +T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 91 FSFILRACADTSCLFVGLICHAQVIRLGWESYDFVL-NGLLHLYATCNCMDPARKLFD-M 148
S +L AC L G HA + + E D VL L+ +YA C ++ A+++F+ +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVE-IDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 149 SVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHF 208
+DV +++++I A G Q+F +M + ++
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN--------------------- 299
Query: 209 NYMQLCGFRPNHAGIVGALTACAFLGALDQGR-WIHAYVDRNGIELDIILGTAIIDMYAK 267
PN VG L AC G +++G+ + ++ GI I ++D+Y +
Sbjct: 300 ---------PNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 268 CGCIETACSVFDSMP-NRDVFAYTSLISG 295
G I+ A S SMP DV + SL+SG
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 280/509 (55%), Gaps = 26/509 (5%)
Query: 5 KQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFA 64
K++ H+ G + + ++ S + D++ G C + F WN MI G+
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE--DVFSWNLMISGYN 212
Query: 65 EKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDF 124
E ++ L +M R+ P + T +L AC+ + H V E
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 125 VLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKN 184
+ N L++ YA C MD A ++F RDVISWTS++ GY + G + +AR FD+MP ++
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 185 AVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHA 244
+SW+ MI+GY++ F E+LE F MQ G P+ +V LTACA LG+L+ G WI
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 245 YVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSAS 304
Y+D+N I+ D+++G A+IDMY KCGC E A VF M RD F +T+++ GLAN+ Q
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 305 AIELFMRMQLEGVVPNE------------------------SMSEIYGIEPGVQHYGCLV 340
AI++F +MQ + P++ M + IEP + HYGC+V
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMV 512
Query: 341 DLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEG 400
D+LGRAG+++ A +++R+MP+ P++ V GALL A R+H D + + + ++E D+
Sbjct: 513 DMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGA 572
Query: 401 VHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEE 460
V+ LL NIYA ++W + +VRR + D ++K PG SLIEV+G EFV+G+++++ EE
Sbjct: 573 VYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEE 632
Query: 461 IVLLLFGIDKHLKSLCFFDDGNEVATEGG 489
I + L + + + D +E+ E G
Sbjct: 633 IYMKLEELAQESTFAAYLPDTSELLFEAG 661
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 179/397 (45%), Gaps = 52/397 (13%)
Query: 3 QIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRG 62
Q KQ+ S G +P K+ F + G +S+ Y+LFV + +WN MI+G
Sbjct: 49 QFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 63 FAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACA-DTSCLFVGLICHAQVIRLGWES 121
+++ + + LY ML+ P+++TF F+L D L G H V++ G S
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 122 YDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMP 181
+V N L+ +Y+ C MD AR +FD DV SW +I+GY ++M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY-------------NRMK 215
Query: 182 EKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRW 241
E ++E++E M+ P ++ L+AC+ + D +
Sbjct: 216 E------------------YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 242 IHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQ 301
+H YV E + L A+++ YA CG ++ A +F SM RDV ++TS++ G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 302 SASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMP- 360
A F +M + + + ++D RAG + ++ REM
Sbjct: 318 LKLARTYFDQMPVRDRIS----------------WTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 361 --IEPDNYVLGALLNACRVHGDVDLGKETVESLVERS 395
+ PD + + ++L AC G +++G E +++ ++++
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKN 397
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 28/281 (9%)
Query: 129 LLHLYATCNCMDPARKLFDMSVNRDV-----------ISWTSLINGYAKSGQISIARQMF 177
+ + C D ++L S+ R V + W S + G+ +S A ++F
Sbjct: 37 FISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGH-----VSYAYKLF 91
Query: 178 DKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLG-AL 236
K+PE + V W+ MI G+ +VD E + + M G P+ L G AL
Sbjct: 92 VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGAL 151
Query: 237 DQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGL 296
G+ +H +V + G+ ++ + A++ MY+ CG ++ A VFD DVF++ +ISG
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 297 ANHDQSASAIELFMRMQLEGVVPNE-SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKV 355
+ +IEL + M+ V P ++ + V+ DL R +
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK----DLCKR------VHEY 261
Query: 356 VREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSL 396
V E EP + AL+NA G++D+ S+ R +
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 266/466 (57%), Gaps = 29/466 (6%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
GDL ++F ++ + WN+MI GF +K P KA L+K+M D ++ T +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 96 RACADTSCLFVGL-ICHAQVIRLGWESYDFVL-NGLLHLYATCNCMDPARKLFDMSVNRD 153
ACA L G +C I + + L N +L +Y C ++ A++LFD +D
Sbjct: 240 SACAKIRNLEFGRQVC--SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 154 VISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQL 213
++WT++++GYA S AR++ + MP+K+ V+W+A+I+ Y Q EAL F+ +QL
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 214 -CGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIE 272
+ N +V L+ACA +GAL+ GRWIH+Y+ ++GI ++ + +A+I MY+KCG +E
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 273 TACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN------------ 320
+ VF+S+ RDVF ++++I GLA H A+++F +MQ V PN
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 321 ------------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVL 368
M YGI P +HY C+VD+LGR+G LE A K + MPI P V
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537
Query: 369 GALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDN 428
GALL AC++H +++L + L+E ++G HVLLSNIYA +W V ++R+ M
Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
Query: 429 EVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKS 474
++K PGCS IE+DG++ EF+SG+ + + E++ L + + LKS
Sbjct: 598 GLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKS 643
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 204/434 (47%), Gaps = 62/434 (14%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
++Q+KQ H+ +GT DP++ K+ + S L + ++F + +F WNT+I
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 61 RGFAEKNEPIKAFALYKQML-RSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
R +A +P+ + + M+ S PN YTF F+++A A+ S L +G H ++
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
S FV N L+H Y +C +D A K+F +DV+SW S+ING+ + G
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS---------- 212
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
P+K ALE F M+ + +H +VG L+ACA + L+ G
Sbjct: 213 -PDK--------------------ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
R + +Y++ N + +++ L A++DMY KCG IE A +FD+M +D +T+++ G A
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 300 DQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREM 359
+ +A E+ M + +V + L+ + G A V E+
Sbjct: 312 EDYEAAREVLNSMPQKDIVA----------------WNALISAYEQNGKPNEALIVFHEL 355
Query: 360 PIEP----DNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIY------ 409
++ + L + L+AC G ++LG+ + S +++ HV + I+
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 410 ---ASTEQWNGVEK 420
S E +N VEK
Sbjct: 415 DLEKSREVFNSVEK 428
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 33 SDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFS 92
S GDL +F ++ R F+W+ MI G A +A ++ +M ++ PN TF+
Sbjct: 411 SKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470
Query: 93 FILRACADT 101
+ AC+ T
Sbjct: 471 NVFCACSHT 479
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 273/502 (54%), Gaps = 61/502 (12%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
++ +KQI + + V+G + + VG++I S S G L + ++LF + I N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
RG A+ +P K +LY +M + P+ YTF+F+L+AC+ G H +V+R G+
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
++V N L+ +A C + A +LFD S ++W+S+ +GYAK G+I A ++FD+M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 181 P-------------------------------EKNAVSWSAMINGYVQVDLFKEALEHFN 209
P EK+ V+W+AMI+GYV KEAL F
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 210 YMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYV-DRNGIELDIILGT----AIIDM 264
M+ G P+ I+ L+ACA LG L+ G+ +H Y+ + + I +GT A+IDM
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 265 YAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNES-- 322
YAKCG I+ A VF + +RD+ + +LI GLA H S IE+F MQ V PNE
Sbjct: 325 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS-IEMFEEMQRLKVWPNEVTF 383
Query: 323 ----------------------MSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMP 360
M ++Y IEP ++HYGC+VD+LGRAG LE A V M
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 361 IEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEK 420
IEP+ V LL AC+++G+V+LGK E L+ D G +VLLSNIYAST QW+GV+K
Sbjct: 444 IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQK 503
Query: 421 VRRGMEDNEVRKVPGCSLIEVD 442
VR+ +D V+K G SLIE D
Sbjct: 504 VRKMFDDTRVKKPTGVSLIEED 525
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 260/463 (56%), Gaps = 24/463 (5%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
GD+ + ++F R WN +I G+ + E KA +YK M P++ T ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
+C+ L G + V G ++N L+ +++ C + AR++FD R ++
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
SWT++I+GYA+ G + ++R++FD M EK+ V W+AMI G VQ ++AL F MQ
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 216 FRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETAC 275
+P+ ++ L+AC+ LGALD G WIH Y+++ + L++ LGT+++DMYAKCG I A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 276 SVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE-------------- 321
SVF + R+ YT++I GLA H +++AI F M G+ P+E
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 322 ----------SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGAL 371
M + + P ++HY +VDLLGRAG+LE A +++ MP+E D V GAL
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 372 LNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVR 431
L CR+HG+V+LG++ + L+E G++VLL +Y W ++ RR M + V
Sbjct: 565 LFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
Query: 432 KVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKS 474
K+PGCS IEV+G+VCEF+ +++ E+I L + +H++S
Sbjct: 625 KIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 198/388 (51%), Gaps = 53/388 (13%)
Query: 3 QIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRG 62
+KQIQ+ + ++G + DPFA ++I FC+ S+ L + ++ ++ F WN IRG
Sbjct: 68 HLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRG 127
Query: 63 FAEKNEPIKAFALYKQMLRS---DFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
F+E P ++F LYKQMLR + P+++T+ + + CAD +G + V++L
Sbjct: 128 FSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRL 187
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
E V N +H++A+C M+ ARK+FD S RD++SW LINGY K G+
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA--------- 238
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
++A+ + M+ G +P+ ++G +++C+ LG L++G
Sbjct: 239 ----------------------EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
+ + YV NG+ + I L A++DM++KCG I A +FD++ R + ++T++ISG A
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 300 DQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREM 359
+ +LF M+ + VV +M I VQ A + A + +EM
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAM-----IGGSVQ-----------AKRGQDALALFQEM 380
Query: 360 P---IEPDNYVLGALLNACRVHGDVDLG 384
+PD + L+AC G +D+G
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVG 408
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 267/479 (55%), Gaps = 30/479 (6%)
Query: 19 DPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQ 78
D F V ++I CS D D + Y +F + +++ MI GF +LY +
Sbjct: 60 DAFVVFELIRVCSTLDSVD--YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 79 MLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNC 138
M+ + LP+NY + +L+AC C + HAQV++LG+ S V ++ +Y
Sbjct: 118 MIHNSVLPDNYVITSVLKACDLKVCREI----HAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 139 MDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQV 198
+ A+K+FD +RD ++ T +IN Y++ G I A ++F + K+ V W+AMI+G V+
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 199 DLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILG 258
+ALE F MQ+ N V L+AC+ LGAL+ GRW+H++V+ +EL +G
Sbjct: 234 KEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG 293
Query: 259 TAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVV 318
A+I+MY++CG I A VF M ++DV +Y ++ISGLA H S AI F M G
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 319 PNE------------------------SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKK 354
PN+ SM ++ +EP ++HYGC+VDLLGR G LE A +
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR 413
Query: 355 VVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQ 414
+ +PIEPD+ +LG LL+AC++HG+++LG++ + L E G +VLLSN+YAS+ +
Sbjct: 414 FIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGK 473
Query: 415 WNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLK 473
W ++R M D+ + K PGCS IEVD + EF+ G+ + E I L +++ L+
Sbjct: 474 WKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 169/402 (42%), Gaps = 74/402 (18%)
Query: 85 LPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARK 144
L T +LR+C + + + HA++IR + FV+ L+ + +T + +D A
Sbjct: 26 LSRRKTLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYD 82
Query: 145 LFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEA 204
+F N +V +T++I+G+ SG+ + ++ +M + + + +I ++ K
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC 142
Query: 205 LE-HFNYMQLCGFRPNHAGIVGALTACAFLGAL-DQGRWIHAYVDRNGIELDIILGTAII 262
E H ++L GF + + + + G L + + DR D + T +I
Sbjct: 143 REIHAQVLKL-GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR-----DHVAATVMI 196
Query: 263 DMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE- 321
+ Y++CG I+ A +F + +D +T++I GL + + A+ELF MQ+E V NE
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 322 -------SMSEIYGIEPG--VQHY-------------GCLVDLLGRAGMLEAAKKVVREM 359
+ S++ +E G V + L+++ R G + A++V R M
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 360 P----------------------------------IEPDNYVLGALLNACRVHGDVDLGK 385
P+ L ALLNAC G +D+G
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 386 ETVESL-----VERSLDHEGVHV-LLSNIYASTEQWNGVEKV 421
E S+ VE ++H G V LL + E + +E +
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 311 bits (797), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 269/475 (56%), Gaps = 30/475 (6%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
G + H LF F++ I + +AF LY Q+L S+ PN +TFS +L
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLL 137
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
++C+ S G + H V++ G +V GL+ +YA + A+K+FD R ++
Sbjct: 138 KSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
S T++I YAK G + AR +FD M E++ VSW+ MI+GY Q +AL F + G
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEG 253
Query: 216 F-RPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETA 274
+P+ +V AL+AC+ +GAL+ GRWIH +V + I L++ + T +IDMY+KCG +E A
Sbjct: 254 KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 275 CSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ-LEGVVPN------------- 320
VF+ P +D+ A+ ++I+G A H S A+ LF MQ + G+ P
Sbjct: 314 VLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAH 373
Query: 321 -----------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLG 369
ESM + YGI+P ++HYGCLV LLGRAG L+ A + ++ M ++ D+ +
Sbjct: 374 AGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWS 433
Query: 370 ALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNE 429
++L +C++HGD LGKE E L+ ++ + G++VLLSNIYAS + GV KVR M++
Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493
Query: 430 VRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
+ K PG S IE++ V EF +G+R + +EI +L I + +KS + + N V
Sbjct: 494 IVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTV 548
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 235 ALDQGRWIHAYVDRNGIELDI---ILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTS 291
++D+ IHA + R+ + L +L + YA G I + ++F + D+F +T+
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 292 LISGLANHDQSASAIELFMRMQLEGVVPNE-SMSEI--------------------YGIE 330
I+ + + A L++++ + PNE + S + GI+
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGID 160
Query: 331 PGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVES 390
P V LVD+ + G + +A+KV MP E A++ G+V+ + +S
Sbjct: 161 PYVA--TGLVDVYAKGGDVVSAQKVFDRMP-ERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 391 LVERSL 396
+ ER +
Sbjct: 218 MCERDI 223
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 308 bits (789), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 283/514 (55%), Gaps = 37/514 (7%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+ QIKQI H+ G + + K+I + + + R+ +Q+R F+W +I
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
RG+A + + +A A+Y M + + P ++TFS +L+AC L +G HAQ RL
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF 181
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
+ +V N ++ +Y C +D ARK+FD RDVISWT LI YA+ G + A ++F+ +
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 181 PEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGR 240
P K+ V+W+AM+ G+ Q +EALE+F+ M+ G R + + G ++ACA LGA
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 241 WIHAYVDRNGIELD--IILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
++G +++G+A+IDMY+KCG +E A +VF SM N++VF Y+S+I GLA
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 299 HDQSASAIELFMRMQLEG-VVPN------------------------ESMSEIYGIEPGV 333
H ++ A+ LF M + + PN +SM + +G++P
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 334 QHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVE 393
HY C+VDLLGR G L+ A ++++ M +EP V GALL ACR+H + ++ + E L E
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 394 RSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCS-LIEVDGVVCEFVSGE 452
D G ++LLSN+YAS W GV +VR+ +++ ++K P S +++ +G + +F G
Sbjct: 482 LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Query: 453 RTNVL-------MEEIV--LLLFGIDKHLKSLCF 477
+ + +EE+V L + G L S+ +
Sbjct: 542 LNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPY 575
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 280/492 (56%), Gaps = 28/492 (5%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
M ++ +I + L G + V + + F + S GD+ + Y+ L + WN +I
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVI 80
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
RGF+ P K+ ++Y QMLR LP++ T+ F++++ + S +G H V++ G E
Sbjct: 81 RGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE 140
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
F+ N L+H+Y + ARKLFD ++++++W S+++ YAKSG + AR +FD+M
Sbjct: 141 WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 181 PEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG-FRPNHAGIVGALTACAFLGALDQG 239
E++ V+WS+MI+GYV+ + +ALE F+ M G + N +V + ACA LGAL++G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVF--DSMPNRDVFAYTSLISGLA 297
+ +H Y+ + L +IL T++IDMYAKCG I A SVF S+ D + ++I GLA
Sbjct: 261 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 298 NHDQSASAIELFMRMQLEGVVPNE------------------------SMSEIYGIEPGV 333
+H +++LF +M+ + P+E S+ E G EP
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGAEPKS 379
Query: 334 QHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVE 393
+HY C+VD+L RAG+++ A + EMPI+P +LGALLN C HG+++L + + L+E
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 394 RSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGER 453
++G +V L+N+YA +Q+ +R ME V+K+ G S++++DG F++ ++
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDK 499
Query: 454 TNVLMEEIVLLL 465
T+ ++I +L
Sbjct: 500 THFHSDKIYAVL 511
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 271/480 (56%), Gaps = 30/480 (6%)
Query: 30 CSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNY 89
C+A D+ RLF + N M + + +A ++ M+ S P+
Sbjct: 284 CNAIDVAK-----RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 90 TFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMS 149
+ + +C+ + G CH V+R G+ES+D + N L+ +Y C+ D A ++FD
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 150 VNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFN 209
N+ V++W S++ GY ++G++ A + F+ MPEKN VSW+ +I+G VQ LF+EA+E F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 210 YMQLC-GFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKC 268
MQ G + ++ +AC LGALD +WI+ Y+++NGI+LD+ LGT ++DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 269 GCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN-------- 320
G E+A S+F+S+ NRDV A+T+ I +A + AIELF M +G+ P+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 321 ----------------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPD 364
SM +++G+ P HYGC+VDLLGRAG+LE A +++ +MP+EP+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 365 NYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRG 424
+ + +LL ACRV G+V++ E + + + G +VLLSN+YAS +WN + KVR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 425 MEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
M++ +RK PG S I++ G EF SG+ ++ M I +L + + L D + V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 191/425 (44%), Gaps = 64/425 (15%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIG-FCSASDIGDLSHGYRLFVCLQ-YRTTFIWNT 58
+ ++K LT G D + K++ C LS +F + Y T F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 59 MIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLG 118
+IRG+A +A L+ +M+ S P+ YTF F L ACA + G+ H ++++G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 119 WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFD 178
+ FV N L+H YA C +D ARK+FD R+V+SWTS+I GYA+ A +F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 179 KMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQ 238
+M V+ PN +V ++ACA L L+
Sbjct: 225 RMVRDEEVT------------------------------PNSVTMVCVISACAKLEDLET 254
Query: 239 GRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
G ++A++ +GIE++ ++ +A++DMY KC I+ A +FD ++ ++ S
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 299 HDQSASAIELFMRMQLEGVVPNE--------SMSEIYGIEPGVQHYG------------- 337
+ A+ +F M GV P+ S S++ I G +G
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 338 --CLVDLLGRAGMLEAAKKVVREMP----IEPDNYVLGALLNACRVHGDVDLGKETVESL 391
L+D+ + + A ++ M + ++ V G + N G+VD ET E++
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN-----GEVDAAWETFETM 429
Query: 392 VERSL 396
E+++
Sbjct: 430 PEKNI 434
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 54/385 (14%)
Query: 6 QIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAE 65
QI + G D F ++ F ++ G+L ++F + R W +MI G+A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 66 KNEPIKAFALYKQMLR-SDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDF 124
++ A L+ +M+R + PN+ T ++ ACA L G +A + G E D
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 125 VLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKN 184
+++ L+ +Y CN +D +A+++FD+ N
Sbjct: 273 MVSALVDMYMKCNAID-------------------------------VAKRLFDEYGASN 301
Query: 185 AVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHA 244
+AM + YV+ L +EAL FN M G RP+ ++ A+++C+ L + G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 245 YVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSAS 304
YV RNG E + A+IDMY KC +TA +FD M N+ V + S+++G + + +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 305 AIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMP---- 360
A E F M + +V + ++ L + + E A +V M
Sbjct: 422 AWETFETMPEKNIVS----------------WNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 361 IEPDNYVLGALLNACRVHGDVDLGK 385
+ D + ++ +AC G +DL K
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAK 490
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 304 bits (779), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 279/503 (55%), Gaps = 31/503 (6%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+K +KQ ++ ++G D V K I CS + G L + Y +F T++ NTMI
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACS--NAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 61 RGFAEKNEPIK---AFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRL 117
R + +EP A +Y+++ P+ +TF F+L+ S ++ G H QV+
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 118 GWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMF 177
G++S V+ GL+ +Y +C + ARK+FD + +DV W +L+ GY K G++ AR +
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 205
Query: 178 DKMP--EKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGA 235
+ MP +N VSW+ +I+GY + EA+E F M + P+ ++ L+ACA LG+
Sbjct: 206 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 265
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
L+ G I +YVD G+ + L A+IDMYAK G I A VF+ + R+V +T++I+G
Sbjct: 266 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 325
Query: 296 LANHDQSASAIELFMRMQLEGVVPNE------------------------SMSEIYGIEP 331
LA H A A+ +F RM GV PN+ SM YGI P
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
++HYGC++DLLGRAG L A +V++ MP + + + G+LL A VH D++LG+ + L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
++ ++ G ++LL+N+Y++ +W+ +R M+ V+K+ G S IEV+ V +F+SG
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 452 ERTNVLMEEIVLLLFGIDKHLKS 474
+ T+ +E I +L +D ++S
Sbjct: 506 DLTHPQVERIHEILQEMDLQIQS 528
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 298 bits (764), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 267/483 (55%), Gaps = 26/483 (5%)
Query: 15 GTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFA 74
TL DPF + ++ G +++ +F + +R WNTMI + +AF
Sbjct: 141 ATLCDPFVETGFMDMYASC--GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 75 LYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYA 134
L+++M S+ +P+ I+ AC T + + +I +L L+ +YA
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 135 TCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMING 194
CMD AR+ F R++ T++++GY+K G++ A+ +FD+ +K+ V W+ MI+
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 195 YVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELD 254
YV+ D +EAL F M G +P+ + ++ACA LG LD+ +W+H+ + NG+E +
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE 378
Query: 255 IILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQL 314
+ + A+I+MYAKCG ++ VF+ MP R+V +++S+I+ L+ H +++ A+ LF RM+
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 315 EGVVPNE------------------------SMSEIYGIEPGVQHYGCLVDLLGRAGMLE 350
E V PNE SM++ Y I P ++HYGC+VDL GRA +L
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 351 AAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYA 410
A +V+ MP+ + + G+L++ACR+HG+++LGK + ++E DH+G VL+SNIYA
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
Query: 411 STEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDK 470
++W V +RR ME+ V K G S I+ +G EF+ G++ + EI L +
Sbjct: 559 REQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 471 HLK 473
LK
Sbjct: 619 KLK 621
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 53/366 (14%)
Query: 53 TFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHA 112
+ ++N +R + +EP Y+++ + ++F IL+A + S LF G+ H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 113 QVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISI 172
++ FV G + +YA+C G+I+
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASC-------------------------------GRINY 164
Query: 173 ARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAF 232
AR +FD+M ++ V+W+ MI Y + L EA + F M+ P+ + ++AC
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 233 LGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSL 292
G + R I+ ++ N + +D L TA++ MYA GC++ A F M R++F T++
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 293 ISGLANHDQSASAIELFMRMQLEGVVPNESMSEIY-------------------GIEPGV 333
+SG + + A +F + + + +V +M Y GI+P V
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 334 QHYGCLVDLLGRAGMLEAAKKV---VREMPIEPDNYVLGALLNACRVHGDVDLGKETVES 390
++ G+L+ AK V + +E + + AL+N G +D ++ E
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 391 LVERSL 396
+ R++
Sbjct: 405 MPRRNV 410
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 298 bits (763), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 267/476 (56%), Gaps = 31/476 (6%)
Query: 5 KQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFA 64
+++ + +G +D + ++G ++ +G + +++F + R WN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYAS--LGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 65 EKNEPIKAFALYKQMLRSDFLP-NNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYD 123
A ++K+M + L + T L AC+ L +G + V+ +E
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSV 182
Query: 124 FVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEK 183
+ N L+ ++ C C+D AR +FD +++V WTS++ GY +G+I AR +F++ P K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 184 NAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIH 243
+ V W+AM+NGYVQ + F EALE F MQ G RP++ +V LT CA GAL+QG+WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 244 AYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSA 303
Y++ N + +D ++GTA++DMYAKCGCIETA VF + RD ++TSLI GLA + S
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 304 SAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQHYGCL 339
A++L+ M+ GV + SM+E + ++P +H CL
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 340 VDLLGRAGMLEAAKKVVREMPIEPDNYVLG---ALLNACRVHGDVDLGKETVESLVERSL 396
+DLL RAG+L+ A++++ +M E D ++ +LL+A R +G+V + + E L + +
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 397 DHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGE 452
H LL+++YAS +W V VRR M+D +RK PGCS IE+DGV EF+ G+
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 52/342 (15%)
Query: 48 LQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVG 107
LQ + ++N M++ A+ K AL+ ++ P+N+T +L++ + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 108 LICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKS 167
H ++ G E +V N L+ +YA+ ++ K+FD RDV+SW LI+ Y +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 168 GQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGAL 227
G+ A +F +M +++ + + + IV L
Sbjct: 126 GRFEDAIGVFKRMSQESNLKF------------------------------DEGTIVSTL 155
Query: 228 TACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVF 287
+AC+ L L+ G I+ +V E+ + +G A++DM+ KCGC++ A +VFDSM +++V
Sbjct: 156 SACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 288 AYTSLISGLANHDQSASAIELFMRMQLEGVVPNESMSEIY----GIEPGVQHYGCLVDLL 343
+TS++ G + + A LF R ++ VV +M Y + ++ + C+
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM---- 270
Query: 344 GRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGK 385
+ I PDN+VL +LL C G ++ GK
Sbjct: 271 -------------QTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 273/529 (51%), Gaps = 64/529 (12%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
++ + QI G D + GK+I C+ S L + RL +C F++NT++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFL-PNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
RG++E +EP + A++ +M+R F+ P++++F+F+++A + L G H Q ++ G
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLIN----------------- 162
ES+ FV L+ +Y C C++ ARK+FD ++++W ++I
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 163 --------------GYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHF 208
GY K+G++ A+++F +MP ++ VSWS MI G F E+ +F
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 209 NYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKC 268
+Q G PN + G L+AC+ G+ + G+ +H +V++ G + + A+IDMY++C
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 269 GCIETACSVFDSM-PNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN------- 320
G + A VF+ M R + ++TS+I+GLA H Q A+ LF M GV P+
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 321 -----------------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEP 363
M +Y IEP ++HYGC+VDL GR+G L+ A + +MPI P
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 364 DNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRR 423
V LL AC HG+++L ++ + L E ++ G VLLSN YA+ +W V +R+
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 497
Query: 424 GMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVL-------MEEIVLLL 465
M ++K SL+EV + +F +GE+ + ++EI+L L
Sbjct: 498 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 284/536 (52%), Gaps = 80/536 (14%)
Query: 1 MKQIKQIQSHLTVSGTLWDP---FAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWN 57
M Q+KQ+ + + +P F GKI+ +S D+++ +R+F ++ ++F+WN
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL--SSSFSDVNYAFRVFDSIENHSSFMWN 118
Query: 58 TMIRGFAEK-NEPIKAFALYKQML-RSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
T+IR A + +AF LY++ML R + P+ +TF F+L+ACA G H Q++
Sbjct: 119 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 178
Query: 116 RLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQ 175
+ G+ +V NGL+HLY +C C+D +AR+
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLD-------------------------------LARK 207
Query: 176 MFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGA 235
+FD+MPE++ VSW++MI+ V+ + AL+ F MQ F P+ + L+ACA LG+
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGS 266
Query: 236 LDQGRWIHAYVDRN---GIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSL 292
L G W HA++ R + +D+++ ++I+MY KCG + A VF M RD+ ++ ++
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 293 ISGLANHDQSASAIELFMRM--QLEGVVPN------------------------ESMSEI 326
I G A H ++ A+ F RM + E V PN + M
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 327 YGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHG-DVDLGK 385
Y IEP ++HYGC+VDL+ RAG + A +V MP++PD + +LL+AC G V+L +
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 386 ETVESLVERSLDHE-------GVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSL 438
E +++ D+E G +VLLS +YAS +WN V VR+ M ++ +RK PGCS
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 439 IEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV----ATEGGS 490
IE++G+ EF +G+ ++ ++I L ID L+S+ + D ++ AT GS
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGS 562
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 58/315 (18%)
Query: 129 LLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQIS-------IARQMFDKMP 181
+ L TC+ M ++L ++ + + Y K Q+S A ++FD +
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 182 EKNAVSWSAMINGYVQ-VDLFKEALEHFNYMQLCG-FRPNHAGIVGALTACAFLGALDQG 239
++ W+ +I V +EA + M G P+ L ACA++ +G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
+ +H + ++G D+ + +I +Y CGC++ A VFD MP R + ++ S+I L
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 300 DQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREM 359
+ SA++LF MQ
Sbjct: 231 GEYDSALQLFREMQRS-------------------------------------------- 246
Query: 360 PIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSN----IYASTEQW 415
EPD Y + ++L+AC G + LG L+ + + VL+ N +Y
Sbjct: 247 -FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 416 NGVEKVRRGMEDNEV 430
E+V +GM+ ++
Sbjct: 306 RMAEQVFQGMQKRDL 320
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 257/496 (51%), Gaps = 33/496 (6%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
M + Q+ S + S L D + ++ S G+++ R+F + R WN++I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
F + ++A +++ ML S P+ T + ++ ACA S + VG H +V++
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 121 SYDFVL-NGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
D +L N + +YA C+ + AR +FD R+VI+ TS+I+GYA + AR MF K
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
M E+N VSW+A+I GY Q +EAL F ++ P H L ACA L L G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 240 RWIHAYVDRNGIEL------DIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLI 293
H +V ++G + DI +G ++IDMY KCGC+E VF M RD ++ ++I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 294 SGLANHDQSASAIELFMRMQLEGVVPNE------------------------SMSEIYGI 329
G A + A+ELF M G P+ SM+ +G+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 330 EPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVE 389
P HY C+VDLLGRAG LE AK ++ EMP++PD+ + G+LL AC+VH ++ LGK E
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 390 SLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFV 449
L+E + G +VLLSN+YA +W V VR+ M V K PGCS I++ G F+
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 450 SGERTNVLMEEIVLLL 465
++++ ++I LL
Sbjct: 646 VKDKSHPRKKQIHSLL 661
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 156/297 (52%), Gaps = 27/297 (9%)
Query: 91 FSFILRACADT--SCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDM 148
F+ +L +C + S ++V + HA VI+ G+ + F+ N L+ Y+ C ++ R++FD
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYV-HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 149 SVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHF 208
R++ +W S++ G K G + A +F MPE++ +W++M++G+ Q D +EAL +F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 209 NYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKC 268
M GF N L+AC+ L +++G +H+ + ++ D+ +G+A++DMY+KC
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 269 GCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE------- 321
G + A VFD M +R+V ++ SLI+ + + A+++F M V P+E
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 322 -SMSEIYGIEPGVQHYG----------------CLVDLLGRAGMLEAAKKVVREMPI 361
+ + + I+ G + +G VD+ + ++ A+ + MPI
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 45/356 (12%)
Query: 33 SDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFS 92
+ +G L LF + R WN+M+ GFA+ + +A + M + F+ N Y+F+
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 93 FILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNR 152
+L AC+ + + G+ H+ + + + S ++ + L+ +Y+ C ++ A+++FD +R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 153 DVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQ 212
+V+SW SLI + ++G AV EAL+ F M
Sbjct: 217 NVVSWNSLITCFEQNGP---------------AV----------------EALDVFQMML 245
Query: 213 LCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRN-GIELDIILGTAIIDMYAKCGCI 271
P+ + ++ACA L A+ G+ +H V +N + DIIL A +DMYAKC I
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 272 ETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNESMSEIYGIEP 331
+ A +FDSMP R+V A TS+ISG A + +A +F +M VV ++ Y
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKET 387
+ L LL R + P +Y +L AC ++ LG +
Sbjct: 366 ENEEALSLFCLLKRESVC-------------PTHYSFANILKACADLAELHLGMQA 408
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 275/503 (54%), Gaps = 60/503 (11%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGK--IIGFCSASDIGDLSHGYRLFVCLQYR-TTFIWN 57
+ +++QI + G +GK I S +S+ +++F ++ FIWN
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 58 TMIRGFAEKNEPIKAFALYKQMLRSDFL-PNNYTFSFILRACADTSCLFVGLICHAQVIR 116
T+IRG+AE I AF+LY++M S + P+ +T+ F+++A + + +G H+ VIR
Sbjct: 90 TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149
Query: 117 LGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQM 176
G+ S +V N LLHLYA C + A K+FD +D+++W S+ING+A++G+
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK------- 202
Query: 177 FDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGAL 236
PE EAL + M G +P+ IV L+ACA +GAL
Sbjct: 203 ----PE--------------------EALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 237 DQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGL 296
G+ +H Y+ + G+ ++ ++D+YA+CG +E A ++FD M +++ ++TSLI GL
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 297 ANHDQSASAIELFMRMQ-LEGVVPNE------------------------SMSEIYGIEP 331
A + AIELF M+ EG++P E M E Y IEP
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
++H+GC+VDLL RAG ++ A + ++ MP++P+ + LL AC VHGD DL + +
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQI 418
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
++ +H G +VLLSN+YAS ++W+ V+K+R+ M + V+KVPG SL+EV V EF+ G
Sbjct: 419 LQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMG 478
Query: 452 ERTNVLMEEIVLLLFGIDKHLKS 474
++++ + I L + L+S
Sbjct: 479 DKSHPQSDAIYAKLKEMTGRLRS 501
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 262/510 (51%), Gaps = 61/510 (11%)
Query: 33 SDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFS 92
+ + D++ ++F + R I N MIR + + ++ M + P++YTF
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 93 FILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNR 152
+L+AC+ + + +G H ++G S FV NGL+ +Y C + AR + D R
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 153 DVISWTSLINGYAKSGQISIA-------------------------------------RQ 175
DV+SW SL+ GYA++ + A +
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 176 MFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGA 235
MF KM +K+ VSW+ MI Y++ + EA+E ++ M+ GF P+ I L AC A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
L G+ IH Y++R + +++L A+IDMYAKCGC+E A VF++M +RDV ++T++IS
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 296 LANHDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEP 331
+ A+ LF ++Q G+VP+ + M++ Y I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
++H C+VDLLGRAG ++ A + +++M +EP+ V GALL ACRVH D D+G + L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
+ + + G +VLLSNIYA +W V +R M+ ++K PG S +EV+ ++ F+ G
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 452 ERTNVLMEEIVLLLFGIDKHLKSLCFFDDG 481
+R++ +EI L + K +K L + D
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%)
Query: 160 LINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPN 219
L+ YA ++ AR++FD++PE+N + + MI YV + E ++ F M C RP+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 220 HAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFD 279
H L AC+ G + GR IH + G+ + +G ++ MY KCG + A V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 280 SMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ 313
M RDV ++ SL+ G A + + A+E+ M+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
R +H+ + + + LG ++ YA + +A VFD +P R+V +I N+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 300 DQSASAIELFMRM 312
+++F M
Sbjct: 119 GFYGEGVKVFGTM 131
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 281 bits (720), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 251/489 (51%), Gaps = 57/489 (11%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSAS-DIGDLSHGYRLFVCLQYRTTFIWNTM 59
+ +I+Q + + +G D F+ K++ F + + + +S+ + + + F N++
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 60 IRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
IR +A + P A ++++ML P+ Y+F+F+L+ACA G H I+ G
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSL------------------- 160
+ FV N L+++Y + ARK+ D RD +SW SL
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 161 ------------INGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHF 208
I+GYA +G + A+++FD MP ++ VSW+AM+ Y V + E LE F
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 209 NYM-QLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAK 267
N M +P+ +V L+ACA LG+L QG W+H Y+D++GIE++ L TA++DMY+K
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 268 CGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN------- 320
CG I+ A VF + RDV + S+IS L+ H A+E+F M EG PN
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 411
Query: 321 -----------------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEP 363
E MS +Y +EP ++HYGC+VDLLGR G +E A+++V E+P +
Sbjct: 412 LSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADE 471
Query: 364 DNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRR 423
+ +L +LL AC+ G ++ + L+E +L + +SN+YAS +W V RR
Sbjct: 472 ASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 424 GMEDNEVRK 432
M V +
Sbjct: 532 NMRAERVNR 540
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 252/477 (52%), Gaps = 57/477 (11%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDI-GDLSHGYRLFVCLQYRTTFIWNTM 59
++++ QIQ++ + + D V K+I FC+ S +S+ LF + I+N+M
Sbjct: 42 LRELMQIQAY-AIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 60 IRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
RG++ P++ F+L+ ++L LP+NYTF +L+ACA L G H ++LG
Sbjct: 101 ARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGL 160
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
+ +V L+++Y C +D A R +FD+
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSA-------------------------------RCVFDR 189
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
+ E V ++AMI GY + + EAL F MQ +PN ++ L++CA LG+LD G
Sbjct: 190 IVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
+WIH Y ++ + + TA+IDM+AKCG ++ A S+F+ M +D A++++I ANH
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309
Query: 300 DQSASAIELFMRMQLEGVVPNE------------------------SMSEIYGIEPGVQH 335
++ ++ +F RM+ E V P+E M +GI P ++H
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 336 YGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERS 395
YG +VDLL RAG LE A + + ++PI P + LL AC H ++DL ++ E + E
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 396 LDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGE 452
H G +V+LSN+YA ++W V+ +R+ M+D + KVPGCS IEV+ VV EF SG+
Sbjct: 430 DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGD 486
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 263/478 (55%), Gaps = 57/478 (11%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
G + + +LF + + WN MI G+AE +A L+K M++++ P+ T ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
ACA + + +G H + G+ S ++N L+ LY+ C
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC------------------- 314
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
G++ A +F+++P K+ +SW+ +I GY ++L+KEAL F M G
Sbjct: 315 ------------GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 216 FRPNHAGIVGALTACAFLGALDQGRWIHAYVDR--NGIELDIILGTAIIDMYAKCGCIET 273
PN ++ L ACA LGA+D GRWIH Y+D+ G+ L T++IDMYAKCG IE
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 274 ACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE------------ 321
A VF+S+ ++ + ++ ++I G A H ++ ++ +LF RM+ G+ P++
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 322 ------------SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLG 369
+M++ Y + P ++HYGC++DLLG +G+ + A++++ M +EPD +
Sbjct: 483 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWC 542
Query: 370 ALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNE 429
+LL AC++HG+V+LG+ E+L++ ++ G +VLLSNIYAS +WN V K R + D
Sbjct: 543 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 602
Query: 430 VRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEVATE 487
++KVPGCS IE+D VV EF+ G++ + EI +L ++ L+ F D +EV E
Sbjct: 603 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQE 660
Score = 241 bits (615), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 230/455 (50%), Gaps = 64/455 (14%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASD-IGDLSHGYRLFVCLQYRTTFIWNTM 59
++ ++ I + + G +A+ K+I FC S L + +F +Q IWNTM
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 60 IRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGW 119
RG A ++P+ A LY M+ LPN+YTF F+L++CA + G H V++LG
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 120 ESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDK 179
+ +V L+ +Y ++ A K+FD S +RDV+S+T+LI GYA G I A+++FD+
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 180 MPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQG 239
+P K+ VSW+AMI+GY + +KEALE F M RP+ + +V ++ACA G+++ G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
R +H ++D +G ++ + A+ID+Y+KCG +ETAC +F+ +P +DV ++ +LI G +
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 300 DQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGC--------------------- 338
+ A+ LF M G PN+ + I P H G
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVT--MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 339 ------LVDLLGRAGMLEAAKKV----------------------------------VRE 358
L+D+ + G +EAA +V +R+
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 359 MPIEPDNYVLGALLNACRVHGDVDLGKETVESLVE 393
+ I+PD+ LL+AC G +DLG+ ++ +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 275 bits (703), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 271/498 (54%), Gaps = 35/498 (7%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+ +KQ+QS + VSG F K++ FC+ + +LS+ +F + T ++ ++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLR-LCNLSYARFIFDRFSFPNTHLYAAVL 95
Query: 61 RGFAEKNEPI---KAFALYKQML-RSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIR 116
++ + P+ AF+ ++ M+ RS PN++ + +L++ S F + H + +
Sbjct: 96 TAYSS-SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFK 154
Query: 117 LGWESYDFVLNGLLHLYATC-NCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQ 175
G+ Y V LLH YA+ + + AR+LFD R+V+SWT++++GYA+SG IS A
Sbjct: 155 SGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVA 214
Query: 176 MFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYM-QLCGFRPNHAGIVGALTACAFLG 234
+F+ MPE++ SW+A++ Q LF EA+ F M RPN +V L+ACA G
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 235 ALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLIS 294
L + IHA+ R + D+ + +++D+Y KCG +E A SVF + + A+ S+I+
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 295 GLANHDQSASAIELF---MRMQLEGVVPN------------------------ESMSEIY 327
A H +S AI +F M++ + + P+ + M+ +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 328 GIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKET 387
GIEP ++HYGCL+DLLGRAG + A +V+ M ++ D + G+LLNAC++HG +DL +
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVA 454
Query: 388 VESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCE 447
V++LV + ++ G +++N+Y W + R+ ++ K PG S IE+D V +
Sbjct: 455 VKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQ 514
Query: 448 FVSGERTNVLMEEIVLLL 465
F S ++++ EEI ++L
Sbjct: 515 FYSLDKSHPETEEIYMIL 532
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 232/470 (49%), Gaps = 58/470 (12%)
Query: 6 QIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAE 65
Q +H+ G DPF +I S+S + D + RLF + + W MI GF
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFAS--RLFDGAEDKDVVTWTAMIDGFVR 181
Query: 66 KNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYD-F 124
+A + +M ++ N T +L+A + G H + G D F
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 125 VLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKN 184
+ + L+ +Y C+C D A +++FD+MP +N
Sbjct: 242 IGSSLVDMYGKCSCYDDA-------------------------------QKVFDEMPSRN 270
Query: 185 AVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHA 244
V+W+A+I GYVQ F + + F M PN + L+ACA +GAL +GR +H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 245 YVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSAS 304
Y+ +N IE++ GT +ID+Y KCGC+E A VF+ + ++V+ +T++I+G A H +
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 305 AIELFMRMQLEGVVPNE------------------------SMSEIYGIEPGVQHYGCLV 340
A +LF M V PNE SM + +EP HY C+V
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 341 DLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEG 400
DL GR G+LE AK ++ MP+EP N V GAL +C +H D +LGK +++ H G
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 401 VHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVS 450
+ LL+N+Y+ ++ W+ V +VR+ M+D +V K PG S IEV G +CEF++
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIA 560
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 182/410 (44%), Gaps = 72/410 (17%)
Query: 3 QIKQIQSHLTVSGTLW---DPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTM 59
+KQI L S + D F + C+A+ + RL LQ + +W+++
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAAT--QFRYARRLLCQLQTLSIQLWDSL 73
Query: 60 IRGFA---EKNEPIKAFALYKQMLRSDFLPNNYTFSFILRAC---ADTSCLFVGLICHAQ 113
I F+ N + +F Y+ M R+ +P+ +TF +L+A D++ HA
Sbjct: 74 IGHFSGGITLNRRL-SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN----PFQFHAH 128
Query: 114 VIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIA 173
+++ G +S FV N L+ Y++ D A +LFD + ++DV++WT++I+G+ ++G S
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS-- 186
Query: 174 RQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFL 233
EA+ +F M+ G N +V L A +
Sbjct: 187 -----------------------------EAMVYFVEMKKTGVAANEMTVVSVLKAAGKV 217
Query: 234 GALDQGRWIHA-YVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSL 292
+ GR +H Y++ ++ D+ +G++++DMY KC C + A VFD MP+R+V +T+L
Sbjct: 218 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTAL 277
Query: 293 ISGLANHDQSASAIELFMRMQLEGVVPNE-SMSEIYG--IEPGVQHYG------------ 337
I+G + +F M V PNE ++S + G H G
Sbjct: 278 IAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSI 337
Query: 338 --------CLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHG 379
L+DL + G LE A V + E + Y A++N HG
Sbjct: 338 EINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAHG 386
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 272/515 (52%), Gaps = 67/515 (13%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGF-CSASDIGDLSHGYRLFVCLQYRTTFIWNTM 59
+KQ++Q+ +HL V+G + K+I CSA I ++ + LF+ + F++N++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAI---AYTHLLFLSVPLPDDFLFNSV 78
Query: 60 IRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVG--LICHAQVIRL 117
I+ ++ P+ A Y++ML S+ P+NYTF+ ++++CAD S L +G + CHA V
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 118 GWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMF 177
G ++Y +L+ Y+K G + ARQ+F
Sbjct: 139 GLDTY---------------------------------VQAALVTFYSKCGDMEGARQVF 165
Query: 178 DKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALD 237
D+MPEK+ V+W+++++G+ Q L EA++ F M+ GF P+ A V L+ACA GA+
Sbjct: 166 DRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS 225
Query: 238 QGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLA 297
G W+H Y+ G++L++ LGTA+I++Y++CG + A VFD M +V A+T++IS
Sbjct: 226 LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 298 NHDQSASAIELFMRMQLE-GVVPN------------------------ESMSEIYGIEPG 332
H A+ELF +M+ + G +PN + M++ Y + PG
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 333 VQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLG---ALLNACRVHGDVDLGKETVE 389
V+H+ C+VD+LGRAG L+ A K + ++ A+L AC++H + DLG E +
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAK 405
Query: 390 SLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFV 449
L+ D+ G HV+LSNIYA + + + V +R GM N +RK G S+IEV+ F
Sbjct: 406 RLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFS 465
Query: 450 SGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
G+ ++ EI L + K + + EV
Sbjct: 466 MGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 33/500 (6%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
M IKQ+ +H +G + +++ I +L + +LF Q TF++N +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLL------IPNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
+ + ++P ++ LY + P+++TF+FI A A S + H+Q R G+E
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
S F L+ YA + AR++FD RDV W ++I GY + G + A ++FD M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 181 PEKNAVSWSAMINGYVQVDLFKEALEHFNYMQL-CGFRPNHAGIVGALTACAFLGALDQG 239
P KN SW+ +I+G+ Q + EAL+ F M+ +PNH +V L ACA LG L+ G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPN-RDVFAYTSLISGLAN 298
R + Y NG +I + A I+MY+KCG I+ A +F+ + N R++ ++ S+I LA
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 299 HDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQ 334
H + A+ LF +M EG P+ +SM E++ I P ++
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 335 HYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVER 394
HYGC++DLLGR G L+ A +++ MP++PD V G LL AC HG+V++ + E+L +
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 395 SLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCS-LIEVDGVVCEFVSGER 453
+ G V++SNIYA+ E+W+GV ++R+ M+ + K G S +EV V +F ++
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 454 TNVLMEEIVLLLFGIDKHLK 473
++ EI +L I + +K
Sbjct: 475 SHPRSYEIYQVLEEIFRRMK 494
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 254/473 (53%), Gaps = 37/473 (7%)
Query: 52 TTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACAD--TSCLFVGLI 109
TT W + I +A + M + PN+ TF +L C D + +G +
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 110 CHAQVIRLGWE-SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSG 168
H +LG + ++ V ++ +Y+ AR +FD +++ ++W ++I+GY +SG
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 169 QISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALT 228
Q+ A +MFDKMPE++ +SW+AMING+V+ +EAL F MQ+ G +P++ I+ AL
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 229 ACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFA 288
AC LGAL G W+H YV + ++ + ++ID+Y +CGC+E A VF +M R V +
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 289 YTSLISGLANHDQSASAIELFMRMQLEGVVPN------------------------ESMS 324
+ S+I G A + + ++ F +MQ +G P+ + M
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 325 EIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHG-DVDL 383
Y I P ++HYGCLVDL RAG LE A K+V+ MP++P+ V+G+LL AC HG ++ L
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 384 GKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDG 443
+ ++ L + ++ +V+LSN+YA+ +W G K+RR M+ ++K PG S IE+D
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 444 VVCEFVSGERTNVLMEEI--VLLLFGIDKHLKSLCFFDDGNEVATEGGSLLDC 494
+ F++G+ +V I VL L D L+ G V T G LL+
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQ-------GCVVETLAGDLLNA 500
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 144/367 (39%), Gaps = 78/367 (21%)
Query: 26 IIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNT--------------------------- 58
IIG S G +F ++ + + WNT
Sbjct: 115 IIGMYSKR--GRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLI 172
Query: 59 ----MIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQV 114
MI GF +K +A +++M S P+ L AC + L GL H V
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 115 IRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIAR 174
+ +++ V N L+ LY C C++ AR++F R V+SW S+I G+A +G
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNA---- 288
Query: 175 QMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLG 234
E+L +F MQ GF+P+ GALTAC+ +G
Sbjct: 289 ---------------------------HESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 235 ALDQG-RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNR-DVFAYTSL 292
+++G R+ I I ++D+Y++ G +E A + SMP + + SL
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 293 ISGLANHDQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAA 352
++ +NH + E M+ + V + S +Y L ++ G E A
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHS------------NYVILSNMYAADGKWEGA 429
Query: 353 KKVVREM 359
K+ R+M
Sbjct: 430 SKMRRKM 436
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 175 QMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFL- 233
Q ++ + VSW++ IN + EA + F+ M L G PNH + L+ C
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 234 -GALDQGRWIHAYVDRNGIELD-IILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTS 291
G+ G +H Y + G++ + +++GTAII MY+K G + A VFD M +++ + +
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 292 LISGLANHDQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEA 351
+I G Q +A ++F +M E + + +++ + G E
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMP----------------ERDLISWTAMINGFVKKGYQEE 189
Query: 352 AKKVVREMPI---EPDNYVLGALLNACRVHGDVDLG 384
A REM I +PD + A LNAC G + G
Sbjct: 190 ALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 268 bits (684), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 241/449 (53%), Gaps = 25/449 (5%)
Query: 56 WNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
+N MI G+ + +A + ++M+ S + +T+ ++RACA L +G HA V+
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 116 RLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQ 175
R S+ F N L+ LY C D AR +F+ +D++SW +L++GY SG I A+
Sbjct: 314 RREDFSFHFD-NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 176 MFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGA 235
+F +M EKN +SW MI+G + +E L+ F+ M+ GF P GA+ +CA LGA
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
G+ HA + + G + + G A+I MYAKCG +E A VF +MP D ++ +LI+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 296 LANHDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEP 331
L H A A++++ M +G+ P+ +SM +Y I P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
G HY L+DLL R+G A+ V+ +P +P + ALL+ CRVHG+++LG + L
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
+H+G ++LLSN++A+T QW V +VR+ M D V+K CS IE++ V F+
Sbjct: 613 FGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVD 672
Query: 452 ERTNVLMEEIVLLLFGIDKHLKSLCFFDD 480
+ ++ E + + L + K ++ L + D
Sbjct: 673 DTSHPEAEAVYIYLQDLGKEMRRLGYVPD 701
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 186/390 (47%), Gaps = 45/390 (11%)
Query: 26 IIGFCSASDIGDLSHGY--RLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSD 83
+ G+C++ DI L+ G + VC+ R T ++N MI GF+ N+ A L+ +M
Sbjct: 87 VSGYCASGDI-TLARGVFEKAPVCM--RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 84 FLPNNYTFSFILRACA-----DTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATC-- 136
F P+N+TF+ +L A + C+ HA ++ G V N L+ +Y+ C
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 137 --NCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEK-NAVSWSAMIN 193
+ + ARK+FD + +D SWT+++ GY K+G + ++ + M + V+++AMI+
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 194 GYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIEL 253
GYV ++EALE M G + + ACA G L G+ +HAYV R +
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DF 318
Query: 254 DIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ 313
+++ +Y KCG + A ++F+ MP +D+ ++ +L+SG + A +F M+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 314 LEGVVPNESMSEIYGI------EPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYV 367
+ ++ M I G+ E G++ + C + R G EP +Y
Sbjct: 379 EKNIL--SWMIMISGLAENGFGEEGLKLFSC----MKREG-------------FEPCDYA 419
Query: 368 LGALLNACRVHGDVDLGKETVESLVERSLD 397
+ +C V G G++ L++ D
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 151/321 (47%), Gaps = 27/321 (8%)
Query: 85 LPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARK 144
+ N Y + L + L + H +I G++ +LN L+ +Y + ++ AR+
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ 70
Query: 145 LFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMP--EKNAVSWSAMINGYVQVDLFK 202
LFD D I+ T++++GY SG I++AR +F+K P ++ V ++AMI G+ +
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGY 130
Query: 203 EALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWI--HAYVDRNGIELDIILGTA 260
A+ F M+ GF+P++ L A + A D+ + + HA ++G + A
Sbjct: 131 SAINLFCKMKHEGFKPDNFTFASVLAGLALV-ADDEKQCVQFHAAALKSGAGYITSVSNA 189
Query: 261 IIDMYAKCGC----IETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEG 316
++ +Y+KC + +A VFD + +D ++T++++G + EL LEG
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL-----LEG 244
Query: 317 VVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREM---PIEPDNYVLGALLN 373
+ N + Y ++ G + A ++VR M IE D + +++
Sbjct: 245 MDDNMKLVA----------YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 374 ACRVHGDVDLGKETVESLVER 394
AC G + LGK+ ++ R
Sbjct: 295 ACATAGLLQLGKQVHAYVLRR 315
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 42/277 (15%)
Query: 28 GFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPN 87
G+ S+ IG+ +F ++ + W MI G AE + L+ M R F P
Sbjct: 360 GYVSSGHIGEAK---LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 88 NYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFD 147
+Y FS +++CA G HAQ++++G++S N L+ +YA C ++ AR++F
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 148 MSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEH 207
D +SW +LI + G +G VD+++E L+
Sbjct: 477 TMPCLDSVSWNALIAALGQHG------------------------HGAEAVDVYEEMLKK 512
Query: 208 FNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILG----TAIID 263
G RP+ ++ LTAC+ G +DQGR Y D I G +ID
Sbjct: 513 -------GIRPDRITLLTVLTACSHAGLVDQGR---KYFDSMETVYRIPPGADHYARLID 562
Query: 264 MYAKCGCIETACSVFDSMPNRDVFA-YTSLISGLANH 299
+ + G A SV +S+P + + +L+SG H
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein At3g28660
OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 263/507 (51%), Gaps = 69/507 (13%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKII-GFCSASDIGDLSH-GYRLFVCLQYRTTFIWNT 58
+KQIK S + G + +A+ K++ F ++ H +F ++ +F+++T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 59 MIRGFAEKNEP---IKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
MIR + ++P ++ F L + D P+ TF F++ AC VG H V+
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 116 RLG-WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIAR 174
+ G + S V G+L +Y + LFD AR
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVE------DKLLFD-------------------------AR 172
Query: 175 QMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLG 234
++FD++P+ + V W ++NGYV+ L E LE F M + G P+ + ALTACA +G
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVG 232
Query: 235 ALDQGRWIHAYVDRNG-IELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLI 293
AL QG+WIH +V + IE D+ +GTA++DMYAKCGCIETA VF+ + R+VF++ +LI
Sbjct: 233 ALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
Query: 294 SGLANHDQSASAIELFMRMQLE-GVVPN------------------------ESMSEIYG 328
G A + + A R++ E G+ P+ E+M YG
Sbjct: 293 GGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 329 IEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETV 388
I P +HY C+VDL+ RAG L+ A ++ +MP++P V GALLN CR H +V+LG+ V
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAV 412
Query: 389 ESLVERSL----DHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGV 444
++L++ + E V LSNIY S ++ KVR +E +RK PG SL+EVDG+
Sbjct: 413 QNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGI 472
Query: 445 VCEFVSGE--RTNVLMEEIVLLLFGID 469
V +FVSG+ N+L ++ L +D
Sbjct: 473 VTKFVSGDVSHPNLLQIHTLIHLLSVD 499
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 158/491 (32%), Positives = 254/491 (51%), Gaps = 71/491 (14%)
Query: 4 IKQIQSH---LTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+K + +H L +S ++ P A+ C + D +LF + R T WN+M+
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD---AMKLFEKMSERDTVSWNSML 192
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
G + E A L+ +M + D +
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLI----------------------------------- 217
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
S++ +L+G YA C M A +LF+ R+ +SW++++ GY+K+G + +AR MFDKM
Sbjct: 218 SWNTMLDG----YARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM 273
Query: 181 P--EKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQ 238
P KN V+W+ +I GY + L KEA + M G + + A ++ L AC G L
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL 333
Query: 239 GRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
G IH+ + R+ + + + A++DMYAKCG ++ A VF+ +P +D+ ++ +++ GL
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV 393
Query: 299 HDQSASAIELFMRMQLEGVVPNE------------------------SMSEIYGIEPGVQ 334
H AIELF RM+ EG+ P++ SM ++Y + P V+
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE 453
Query: 335 HYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVER 394
HYGCLVDLLGR G L+ A KVV+ MP+EP+ + GALL ACR+H +VD+ KE +++LV+
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL 513
Query: 395 SLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERT 454
G + LLSNIYA+ E W GV +R M+ V K G S +E++ + EF +++
Sbjct: 514 DPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKS 573
Query: 455 NVLMEEIVLLL 465
+ ++I +L
Sbjct: 574 HPKSDQIYQML 584
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 190/394 (48%), Gaps = 28/394 (7%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+ Q+KQ+ + + D K+I S +L+ R+F +Q + N++I
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLA--VRVFNQVQEPNVHLCNSLI 89
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
R A+ ++P +AF ++ +M R +N+T+ F+L+AC+ S L V + H + +LG
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 121 SYDFVLNGLLHLYATCNCM--DPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFD 178
S +V N L+ Y+ C + A KLF+ RD +SW S++ G K+G++ AR++FD
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 179 KMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQ 238
+MP+++ +SW+ M++GY + +A E F M P + + + A D
Sbjct: 210 EMPQRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSWSTMVMGYSKAGDM 263
Query: 239 GRWIHAYVDRNGIEL-DIILGTAIIDMYAKCGCIETACSVFDSMPNRDV-FAYTSLISGL 296
D+ + +++ T II YA+ G ++ A + D M + F ++IS L
Sbjct: 264 -EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 297 ANHDQSASAIELFMRMQLEGVVPNESM-SEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKV 355
A +S L + M++ ++ ++ S Y + L+D+ + G L+ A V
Sbjct: 323 AACTESGL---LSLGMRIHSILKRSNLGSNAYVL-------NALLDMYAKCGNLKKAFDV 372
Query: 356 VREMPIEPDNYVLGALLNACRVHGDVDLGKETVE 389
++P + D +L+ VHG GKE +E
Sbjct: 373 FNDIP-KKDLVSWNTMLHGLGVHGH---GKEAIE 402
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 254/512 (49%), Gaps = 63/512 (12%)
Query: 6 QIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAE 65
++ H+ +G+ DPF K+IG SD+G + + ++F + RT ++WN + R
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 66 KNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSC----LFVGLICHAQVIRLGWES 121
+ LY +M R + +T++++L+AC + C L G HA + R G+ S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 122 YDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMP 181
+ +++ T+L++ YA+ G + A +F MP
Sbjct: 216 HVYIM-------------------------------TTLVDMYARFGCVDYASYVFGGMP 244
Query: 182 EKNAVSWSAMINGYVQVDLFKEALEHFNYM--QLCGFRPNHAGIVGALTACAFLGALDQG 239
+N VSWSAMI Y + EAL F M + PN +V L ACA L AL+QG
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 240 RWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANH 299
+ IH Y+ R G++ + + +A++ MY +CG +E VFD M +RDV ++ SLIS H
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 300 DQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQH 335
AI++F M G P E+M +GI+P ++H
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 336 YGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERS 395
Y C+VDLLGRA L+ A K+V++M EP V G+LL +CR+HG+V+L + L
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 396 LDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTN 455
+ G +VLL++IYA + W+ V++V++ +E ++K+PG +EV + FVS + N
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 456 VLMEEIVLLLFGIDKHLKSLCFFDDGNEVATE 487
LME+I L + + +K + V E
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 156/360 (43%), Gaps = 56/360 (15%)
Query: 5 KQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFA 64
K+I +HLT G + + ++ + G + + +F + R W+ MI +A
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDM--YARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 65 EKNEPIKAFALYKQMLR--SDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESY 122
+ + +A +++M+R D PN+ T +L+ACA + L G + H ++R G +S
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 123 DFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPE 182
V++ L+ +Y C ++ +++FD +RDV+SW SLI+ Y
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG----------------- 362
Query: 183 KNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWI 242
++GY K+A++ F M G P V L AC+ G +++G+ +
Sbjct: 363 ---------VHGY-----GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 243 HAYVDRN-GIELDIILGTAIIDMYAKCGCIETACSVFDSM---PNRDVFAYTSLISGLAN 298
+ R+ GI+ I ++D+ + ++ A + M P V+ SL+
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG--SLLGSCRI 466
Query: 299 HDQSASAIELFMRMQLEGVVPNESMSEIYGIEP-GVQHYGCLVDLLGRAGMLEAAKKVVR 357
H +EL R + ++ +EP +Y L D+ A M + K+V +
Sbjct: 467 HGN----VELAER----------ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 512
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 64/345 (18%)
Query: 78 QMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCN 137
++L + P+ T+ ++ C S L L H ++ G + F+ L+ +Y+
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 138 CMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQ 197
+D ARK+FD + R + W +L +G ++ KM N + V+
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM---NRIG--------VE 175
Query: 198 VDLFKEALEHFNYMQLCGFRPNHAGIVGALTACA----FLGALDQGRWIHAYVDRNGIEL 253
D F + Y+ L AC + L +G+ IHA++ R G
Sbjct: 176 SDRFT-----YTYV---------------LKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 254 DIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ 313
+ + T ++DMYA+ GC++ A VF MP R+V +++++I+ A + ++ A+ F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 314 LEG--VVPN--------ESMSEIYGIEPGVQHYG---------------CLVDLLGRAGM 348
E PN ++ + + +E G +G LV + GR G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 349 LEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVE 393
LE ++V M + D +L+++ VHG GK+ ++ E
Sbjct: 336 LEVGQRVFDRMH-DRDVVSWNSLISSYGVHG---YGKKAIQIFEE 376
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 239/457 (52%), Gaps = 36/457 (7%)
Query: 43 RLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL--RACAD 100
+ F + R WNT+I G+A+ + +A L+ + D S + R +
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 101 TSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSL 160
LF + +V W N +L Y M+ A++LFD+ R+V +W ++
Sbjct: 300 ARELFDKMPERNEV---SW-------NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 161 INGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNH 220
I GYA+ G+IS A+ +FDKMP+++ VSW+AMI GY Q EAL F M+ G R N
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 221 AGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDS 280
+ AL+ CA + AL+ G+ +H + + G E +G A++ MY KCG IE A +F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 281 MPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE------------------- 321
M +D+ ++ ++I+G + H A+ F M+ EG+ P++
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 322 -----SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACR 376
+M++ YG+ P QHY C+VDLLGRAG+LE A +++ MP EPD + G LL A R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 377 VHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGC 436
VHG+ +L + + + ++ G++VLLSN+YAS+ +W V K+R M D V+KVPG
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 437 SLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLK 473
S IE+ F G+ + +EI L +D +K
Sbjct: 650 SWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 185/437 (42%), Gaps = 119/437 (27%)
Query: 37 DLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILR 96
+L LF + R WNTM+ G+A+ A +++ +M + + N S ++
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 97 -----------------ACADTSCLFVGLICHAQVI--RLGWESYDF----VLNGLLHLY 133
A +CL G + +++ R ++S + N ++ Y
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 134 ATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMIN 193
A +D AR+LFD S +DV +WT++++GY ++ + AR++FDKMPE+N VSW+AM+
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLA 320
Query: 194 GYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIEL 253
GYVQ + + A E F+ M C RN
Sbjct: 321 GYVQGERMEMAKELFDVM-----------------PC-----------------RN---- 342
Query: 254 DIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ 313
+ +I YA+CG I A ++FD MP RD ++ ++I+G + S A+ LF++M+
Sbjct: 343 -VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 314 LEGVVPNESM--------SEIYGIEPGVQHYGCLVD-------LLGRA--------GMLE 350
EG N S +++ +E G Q +G LV +G A G +E
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 351 AAKKVVREMP----------------------------------IEPDNYVLGALLNACR 376
A + +EM ++PD+ + A+L+AC
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 377 VHGDVDLGKETVESLVE 393
G VD G++ ++ +
Sbjct: 522 HTGLVDKGRQYFYTMTQ 538
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 37/323 (11%)
Query: 56 WNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
WN I + +A ++K+M R + N S LR G A+ +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN---------GEFELARKL 117
Query: 116 RLGWESYDFV-LNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIAR 174
D V N ++ Y + AR+LF++ RDV SW ++++GYA++G + AR
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 175 QMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLG 234
+FD+MPEKN VSW+A+++ YVQ +EA F R N A + C G
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS------RENWALVS---WNCLLGG 228
Query: 235 ALDQGRWIHA--YVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSL 292
+ + + + A + D + D++ II YA+ G I+ A +FD P +DVF +T++
Sbjct: 229 FVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 293 ISGLANHDQSASAIELFMRM----------QLEGVVPNESM---SEIYGIEP--GVQHYG 337
+SG + A ELF +M L G V E M E++ + P V +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 338 CLVDLLGRAGMLEAAKKVVREMP 360
++ + G + AK + +MP
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMP 370
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 32/248 (12%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
G +S LF + R W MI G+++ +A L+ QM R N +FS L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
CAD L +G H ++++ G+E+ FV N LL +Y C ++ A LF +D++
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
SW ++I GY++ G +A + F+ M + G
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKRE-------------------------------G 505
Query: 216 FRPNHAGIVGALTACAFLGALDQGR-WIHAYVDRNGIELDIILGTAIIDMYAKCGCIETA 274
+P+ A +V L+AC+ G +D+GR + + G+ + ++D+ + G +E A
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 275 CSVFDSMP 282
++ +MP
Sbjct: 566 HNLMKNMP 573
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 153 DVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQ 212
D+ W I+ Y ++G+ + A ++F +MP ++VS++ MI+GY++ F+ A + F+ M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 213 LCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIE 272
P + + ++ + G+ + E D+ ++ YA+ GC++
Sbjct: 122 -----PERDLVSWNVMIKGYVRNRNLGKARELF--EIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 273 TACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQ----------LEGVVPNES 322
A SVFD MP ++ ++ +L+S + + A LF + L G V +
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 323 MSEIYGIEPG-----VQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRV 377
+ E V + ++ ++G ++ A+++ E P++ D + A+++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQ 293
Query: 378 HGDVDLGKETVESLVERS 395
+ V+ +E + + ER+
Sbjct: 294 NRMVEEARELFDKMPERN 311
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing protein At3g28640
OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1
Length = 504
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 260/507 (51%), Gaps = 69/507 (13%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKII-GFCSASDIGDLSH-GYRLFVCLQYRTTFIWNT 58
+KQIK S + G + +A+ K++ F ++ H +F ++ +F+++T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 59 MIRGFAEKNEP---IKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
MIR + ++P ++ F L + D P+ TF F++ AC VG H V+
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 116 RLG-WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIAR 174
+ G + S V G+L +Y + L D AR
Sbjct: 144 KNGVFLSDSHVQTGVLRIYVE------DKLLLD-------------------------AR 172
Query: 175 QMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLG 234
++FD++P+ + V W ++NGYV+ L E LE F M + G P+ + ALTACA +G
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVG 232
Query: 235 ALDQGRWIHAYVDRNG-IELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLI 293
AL QG+WIH +V + IE D+ +GTA++DMYAKCGCIETA VF + R+VF++ +LI
Sbjct: 233 ALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALI 292
Query: 294 SGLANHDQSASAIELFMRMQLE-GVVPN------------------------ESMSEIYG 328
G A + + A+ R++ E G+ P+ E+M Y
Sbjct: 293 GGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYE 352
Query: 329 IEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETV 388
I P +HY C+VDL+ RAG L+ A ++ +MP++P V GALLN CR H +V+LG+ V
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAV 412
Query: 389 ESLVERSL----DHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGV 444
++L++ + E V LSNIY S ++ KVR +E VRK PG S++EVDG
Sbjct: 413 KNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGN 472
Query: 445 VCEFVSGE--RTNVLMEEIVLLLFGID 469
V +FVSG+ N+L V+ L +D
Sbjct: 473 VTKFVSGDVSHPNLLQIHTVIHLLSVD 499
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 254/478 (53%), Gaps = 28/478 (5%)
Query: 35 IGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFL-PNNYTFSF 93
+G + F + R WN+MI GF ++ ++A ++ +MLR L P+ +T +
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 94 ILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRD 153
+L ACA+ L +G H+ ++ G++ VLN L+ +Y+ C ++ AR+L + +D
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 154 --VISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYM 211
+ +T+L++GY K G ++ A+ +F + +++ V+W+AMI GY Q + EA+ F M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 212 QLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCI 271
G RPN + L+ + L +L G+ IH ++G + + A+I MYAK G I
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 272 ETACSVFDSMP-NRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN---------- 320
+A FD + RD ++TS+I LA H + A+ELF M +EG+ P+
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 321 --------------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNY 366
+ M ++ I P + HY C+VDL GRAG+L+ A++ + +MPIEPD
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 367 VLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGME 426
G+LL+ACRVH ++DLGK E L+ ++ G + L+N+Y++ +W K+R+ M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 427 DNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
D V+K G S IEV V F + T+ EI + + I +K + + D V
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 193/427 (45%), Gaps = 63/427 (14%)
Query: 33 SDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFS 92
S GD+ F L R + W TMI G+ + KA + M++ P +T +
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 93 FILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDP--ARKLFDMSV 150
+L + A T C+ G H+ +++LG V N LL++YA C DP A+ +FD V
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG--DPMMAKFVFDRMV 208
Query: 151 NRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNY 210
RD+ SW ++I + + GQ+ +A F++M E++ V+W++MI+G+ Q AL+ F+
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 211 M-QLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCG 269
M + P+ + L+ACA L L G+ IH+++ G ++ I+ A+I MY++CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 270 CIET---------------------------------ACSVFDSMPNRDVFAYTSLISGL 296
+ET A ++F S+ +RDV A+T++I G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 297 ANHDQSASAIELFMRMQLEGVVPNESM-----------------SEIYG--IEPG----V 333
H AI LF M G PN +I+G ++ G V
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 334 QHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVE 393
L+ + +AG + +A + + E D +++ A HG + E E+++
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 394 RSL--DH 398
L DH
Sbjct: 509 EGLRPDH 515
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 172/343 (50%), Gaps = 17/343 (4%)
Query: 105 FVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGY 164
F + H +VI+ G +++N L+++Y+ ARKLFD R SW ++++ Y
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 165 AKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIV 224
+K G + + FD++P++++VSW+ MI GY + + +A+ M G P +
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 225 GALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNR 284
L + A ++ G+ +H+++ + G+ ++ + ++++MYAKCG A VFD M R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 285 DVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLG 344
D+ ++ ++I+ Q A+ F +M +V SM G G DL
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS------GFNQRG--YDL-- 260
Query: 345 RAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVL 404
RA L+ K++R+ + PD + L ++L+AC + +GK+ +V D G ++
Sbjct: 261 RA--LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IV 316
Query: 405 LSNIYASTEQWNGVEKVRRGMEDNEVR--KVPGCSLIEVDGVV 445
L+ + + + GVE RR +E + K+ G + + +DG +
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL-LDGYI 358
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 272/531 (51%), Gaps = 91/531 (17%)
Query: 31 SASDIGDLSHGYRLFVCLQYRT-TFIWNTMIRGFAEKNEPIKAFALYKQMLRSD-FLPNN 88
SAS +G + + +LF R +F+ N+MI+ + E + +FALY+ + + F P+N
Sbjct: 20 SASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDN 78
Query: 89 YTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDM 148
+TF+ + ++C+ + C++ GL H+Q+ R G+ + +V G++ +YA M AR FD
Sbjct: 79 FTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDE 138
Query: 149 SVNRDVISWTSLINGY--------------------------------AKSGQISIARQM 176
+R +SWT+LI+GY KSG ++ AR++
Sbjct: 139 MPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL 198
Query: 177 FDKMPEKNAVSWSAMINGYVQV-------DLF------------------------KEAL 205
FD+M K ++W+ MI+GY + LF +E +
Sbjct: 199 FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 206 EHFNYMQ-LCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDM 264
F MQ P+ I+ L A + GAL G W H +V R ++ + + TAI+DM
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDM 318
Query: 265 YAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLE--------- 315
Y+KCG IE A +FD MP + V ++ ++I G A + + +A++LF+ M +E
Sbjct: 319 YSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITML 378
Query: 316 ---------GVVPN-----ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPI 361
G+V M E+ G+ ++HYGC+VDLLGRAG L+ A+ ++ MP
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 362 EPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKV 421
EP+ +L + L+AC + D++ + ++ VE ++G +VLL N+YA+ ++W+ V
Sbjct: 438 EPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMV 497
Query: 422 RRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHL 472
+ M N+ +K GCSLIE++ +V EF+SG+ T+ I L+L + H+
Sbjct: 498 KNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHM 548
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 38/259 (14%)
Query: 26 IIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFL 85
I G+C +I D+ +LF + R WNTMI G+ + +P + L+++M + L
Sbjct: 214 IHGYC---NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 86 -PNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARK 144
P++ T +L A +DT L +G CH V R + V +L +Y+ C ++ A++
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKR 330
Query: 145 LFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEA 204
+FD + V SW ++I+GYA +G A +F M + +E
Sbjct: 331 IFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-------------------MIEE- 370
Query: 205 LEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGR-WIHAYVDRNGIELDIILGTAIID 263
+P+ ++ +TAC G +++GR W H + G+ I ++D
Sbjct: 371 ------------KPDEITMLAVITACNHGGLVEEGRKWFHV-MREMGLNAKIEHYGCMVD 417
Query: 264 MYAKCGCIETACSVFDSMP 282
+ + G ++ A + +MP
Sbjct: 418 LLGRAGSLKEAEDLITNMP 436
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 121/254 (47%), Gaps = 26/254 (10%)
Query: 149 SVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWS-AMINGYVQVDLFKEALEH 207
++ +V +T + A + I AR++FD+ P+++ S +MI Y++ + ++
Sbjct: 5 AIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFAL 64
Query: 208 FNYM--QLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMY 265
+ + + C F P++ +C+ + QG +H+ + R G D+ + T ++DMY
Sbjct: 65 YRDLRKETC-FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 266 AKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNESMSE 325
AK G + A + FD MP+R ++T+LISG + A +LF +M
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------------- 170
Query: 326 IYGIEPGVQH---YGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVD 382
P V+ Y ++D ++G + +A+++ EM + + C + D+D
Sbjct: 171 -----PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIK-DID 224
Query: 383 LGKETVESLVERSL 396
++ +++ ER+L
Sbjct: 225 AARKLFDAMPERNL 238
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 246/470 (52%), Gaps = 37/470 (7%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFL-PNNYTFSFI 94
G SH ++F + +R W +++ + N K +++ + S L P+++ FS +
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL 111
Query: 95 LRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDV 154
++ACA+ + G H I + + + V + L+ +YA C ++ A+ +FD ++
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 155 ISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLC 214
ISWT++++GYAKSG+ A ++F +P KN SW+A+I+G+VQ EA F M
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM--- 228
Query: 215 GFRPNHAGIVGALT------ACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKC 268
R I+ L ACA L A GR +H V G + + + A+IDMYAKC
Sbjct: 229 --RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 269 GCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE------- 321
+ A +F M +RDV ++TSLI G+A H Q+ A+ L+ M GV PNE
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 322 -----------------SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPD 364
SM++ YGI P +QHY CL+DLLGR+G+L+ A+ ++ MP PD
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 365 NYVLGALLNACRVHGDVDLGKETVESLVER-SLDHEGVHVLLSNIYASTEQWNGVEKVRR 423
ALL+AC+ G +G + LV L ++LLSNIYAS W V + RR
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Query: 424 GMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLK 473
+ + EVRK PG S +EV F +GE ++ L E+I LL +++ ++
Sbjct: 467 KLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 95 LRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDV 154
L+ CA L HA +++LG + N L+++Y C A ++FD +RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 155 ISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLC 214
I+W S++ + A ++G K +
Sbjct: 70 IAWASVLTALNQ-----------------------ANLSG-------KTLSVFSSVGSSS 99
Query: 215 GFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETA 274
G RP+ + ACA LG++D GR +H + + D ++ ++++DMYAKCG + +A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 275 CSVFDSMPNRDVFAYTSLISGLANHDQSASAIELF 309
+VFDS+ ++ ++T+++SG A + A+ELF
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 72/196 (36%), Gaps = 44/196 (22%)
Query: 227 LTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDV 286
L CA L + +HA++ + GI L ++++Y KCG A VFD MP+RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 287 FAYTSLISGLANHDQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRA 346
A+ S+++ L + S
Sbjct: 70 IAWASVLTALNQANLSGKT----------------------------------------- 88
Query: 347 GMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKET-VESLVERSLDHEGVHVLL 405
L V + PD++V AL+ AC G +D G++ +V + E V L
Sbjct: 89 --LSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSL 146
Query: 406 SNIYASTEQWNGVEKV 421
++YA N + V
Sbjct: 147 VDMYAKCGLLNSAKAV 162
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 258 bits (659), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 256/486 (52%), Gaps = 34/486 (6%)
Query: 1 MKQIKQIQSHLTVSGTL-WDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTM 59
+ ++KQI H+ VSG L + ++ F ++G+ ++F + + +N M
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKF--YMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 60 IRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLG- 118
I G+A++ ++A LY +M+ P+ YT +L C S + +G H + R G
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 119 -WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMF 177
+ S + N LL +Y C A++ FD +D+ SW +++ G+ + G + A+ +F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 178 DKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLC--GFRPNHAGIVGALTACAFLGA 235
D+MP+++ VSW++++ GY + + + Y +P+ +V ++ A G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
L GRW+H V R ++ D L +A+IDMY KCG IE A VF + +DV +TS+I+G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 296 LANHDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEP 331
LA H A++LF RMQ EGV PN M + +G +P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVV-REMPIEPDNYVLGALLNACRVHGDVDLGKETVES 390
+HYG LVDLL RAG +E AK +V ++MP+ P + G++L+ACR D++ + +
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 391 LVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPG-CSLIEVDGVVCEFV 449
L++ + EG +VLLSNIYA+ +W +K R ME+ V+K G S++ V+G + FV
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG-LHRFV 622
Query: 450 SGERTN 455
+ E+ N
Sbjct: 623 AAEKQN 628
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 164/395 (41%), Gaps = 67/395 (16%)
Query: 3 QIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYR-TTFIWNTMIR 61
Q KQ+ + + + D F + ++I F + + +L LF+ F++NTMI
Sbjct: 49 QFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMIS 108
Query: 62 GFAE-KNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWE 120
+ KNE F LY M+R P+ TF ++++A +S L H +I G
Sbjct: 109 AVSSSKNE---CFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVKQIHCHIIVSG-- 160
Query: 121 SYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKM 180
C+ L W SL+ Y + G +A ++F +M
Sbjct: 161 -----------------CLSLGNYL-----------WNSLVKFYMELGNFGVAEKVFARM 192
Query: 181 PEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGR 240
P + S++ MI GY + EAL+ + M G P+ ++ L C L + G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 241 WIHAYVDRNG--IELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLAN 298
+H +++R G ++IL A++DMY KC A FD+M +D+ ++ +++ G
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 299 HDQSASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVRE 358
+A +F +M P + + G GC ++ VRE
Sbjct: 313 LGDMEAAQAVFDQM------PKRDLVSWNSLLFGYSKKGC-------------DQRTVRE 353
Query: 359 M--------PIEPDNYVLGALLNACRVHGDVDLGK 385
+ ++PD + +L++ +G++ G+
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 229/472 (48%), Gaps = 54/472 (11%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
G L ++F + R W T+I G+++ + P A + QMLR + PN +T S ++
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
+A A G H ++ G++S V + LL LY MD A+ +FD +R+ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
SW +LI G+A+ ++ALE F M G
Sbjct: 229 SWNALIAGHARRSGT-------------------------------EKALELFQGMLRDG 257
Query: 216 FRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETAC 275
FRP+H AC+ G L+QG+W+HAY+ ++G +L G ++DMYAK G I A
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 276 SVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE-------------- 321
+FD + RDV ++ SL++ A H A+ F M+ G+ PNE
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 322 ---------SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALL 372
+ + GI P HY +VDLLGRAG L A + + EMPIEP + ALL
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 373 NACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRK 432
NACR+H + +LG E + E D G HV+L NIYAS +WN +VR+ M+++ V+K
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 433 VPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKSLCFFDDGNEV 484
P CS +E++ + FV+ + + EEI + +K L + D + V
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 549
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 27/259 (10%)
Query: 153 DVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQ 212
D++ +L+N YAK G + AR++F+KMP+++ V+W+ +I+GY Q D +AL FN M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 213 LCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIE 272
G+ PN + + A A G +H + + G + ++ +G+A++D+Y + G ++
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 273 TACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE-SMSEIYG--- 328
A VFD++ +R+ ++ +LI+G A + A+ELF M +G P+ S + ++G
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 329 ----IEPG--VQHY-------------GCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLG 369
+E G V Y L+D+ ++G + A+K+ + + D
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWN 332
Query: 370 ALLNACRVHGDVDLGKETV 388
+LL A HG GKE V
Sbjct: 333 SLLTAYAQHG---FGKEAV 348
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 23/152 (15%)
Query: 227 LTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDV 286
L C L QGR +HA++ ++ DI++G +++MYAKCG +E A VF+ MP RD
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 287 FAYTSLISGLANHDQSASAIELFMRMQLEGVVPNE-SMSEIY------------------ 327
+T+LISG + HD+ A+ F +M G PNE ++S +
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 328 ----GIEPGVQHYGCLVDLLGRAGMLEAAKKV 355
G + V L+DL R G+++ A+ V
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 234/460 (50%), Gaps = 27/460 (5%)
Query: 36 GDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFIL 95
G L +F + R WNTM+ G+A+ +A YK+ RS N ++F+ +L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 96 RACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVI 155
AC + L + H QV+ G+ S + ++ YA C M+ A++ FD +D+
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 156 SWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCG 215
WT+LI+GYAK G + A ++F +MPEKN VSW+A+I GYV+ AL+ F M G
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 216 FRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETAC 275
+P L A A + +L G+ IH Y+ R + + I+ +++IDMY+K G +E +
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 276 SVFDSMPNR-DVFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN-------------- 320
VF ++ D + ++IS LA H A+ + M V PN
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 321 ----------ESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGA 370
ESM+ +GI P +HY CL+DLLGRAG + + + EMP EPD ++ A
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNA 486
Query: 371 LLNACRVHGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEV 430
+L CR+HG+ +LGK+ + L++ + ++LLS+IYA +W VEK+R M+ V
Sbjct: 487 ILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRV 546
Query: 431 RKVPGCSLIEVDGVVCEFV--SGERTNVLMEEIVLLLFGI 468
K S IE++ V F G + EEI +L +
Sbjct: 547 NKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 55/341 (16%)
Query: 94 ILRACADTSCLFVGLICHAQVIRLGWESYDFVL-NGLLHLYATCNCMDPARKLFDMSVNR 152
+L+ C DT L G H + G++ + +L N L+ +Y C A K+FD R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 153 DVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQ 212
++ SW ++++GY KSG + AR +FD MPE++ VSW+ M+ GY Q EAL + +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 213 LCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIE 272
G + N G LTAC L R H V G +++L +IID YAKCG +E
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 273 TACSVFDSMPNRDVFAYTSLISGLAN-HDQSAS--------------------------- 304
+A FD M +D+ +T+LISG A D A+
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 305 ---AIELFMRMQLEGVVPNESM-----------------SEIYG------IEPGVQHYGC 338
A++LF +M GV P + EI+G + P
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 339 LVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHG 379
L+D+ ++G LEA+++V R + D +++A HG
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 37/302 (12%)
Query: 33 SDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFS 92
+ +GD+ +LF + + W +I G+ + +A L+++M+ P +TFS
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 93 FILRACADTSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNR 152
L A A + L G H +IR V++ L+ +Y+ ++ + ++F + ++
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 153 -DVISWTSLINGYAKSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYM 211
D + W ++I+ A+ G A +M D MI VQ
Sbjct: 376 HDCVFWNTMISALAQHGLGHKALRMLDD-----------MIKFRVQ-------------- 410
Query: 212 QLCGFRPNHAGIVGALTACAFLGALDQG-RWIHAYVDRNGIELDIILGTAIIDMYAKCGC 270
PN +V L AC+ G +++G RW + ++GI D +ID+ + GC
Sbjct: 411 ------PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 271 IETACSVFDSMPNRDVFAYTSLISGL----ANHDQSASAIELFMRMQLEGVVPNESMSEI 326
+ + MP + I G+ N + A + +++ E P +S I
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 327 YG 328
Y
Sbjct: 525 YA 526
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 201 FKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWIHAYVDRNGIEL-DIILGT 259
+A+ + G R + L C +L QG+WIH ++ G + + +L
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 260 AIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASAIELFMRMQLEGVVP 319
+I MY KCG AC VFD M R+++++ +++SG A +F M VV
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVS 146
Query: 320 NESM 323
+M
Sbjct: 147 WNTM 150
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 262/509 (51%), Gaps = 34/509 (6%)
Query: 5 KQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLF--VCLQYRTTFIWNTMIRG 62
K++ + LT SG P + F + G++ +LF + L + W T++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 63 FAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESY 122
F+ + + L+ +M R ++ + + CA L H +++G +
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 123 DFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPE 182
V N L+ +Y C + +++F+ + V+SWT +++ K + R++F +MPE
Sbjct: 146 VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPE 205
Query: 183 KNAVSWSAMINGYVQVDLFKEALEHFNYMQL-CGFRPNHAGIVGALTACAFLGALDQGRW 241
+NAV+W+ M+ GY+ +E LE M CG N + L+ACA G L GRW
Sbjct: 206 RNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Query: 242 IHAYVDRNGIEL-------DIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLIS 294
+H Y + + + D+++GTA++DMYAKCG I+++ +VF M R+V + +L S
Sbjct: 266 VHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFS 325
Query: 295 GLANHDQSASAIELFMRMQLEGVVPNE----------SMSEI-------------YGIEP 331
GLA H + I++F +M E V P++ S S I YG+EP
Sbjct: 326 GLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEP 384
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
V HY C+VDLLGRAG++E A+ ++REMP+ P+ VLG+LL +C VHG V++ + L
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
++ S + +L+SN+Y + + + + +R + +RK+PG S I V+ V F SG
Sbjct: 445 IQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSG 504
Query: 452 ERTNVLMEEIVLLLFGIDKHLKSLCFFDD 480
+R++ +EI L L + + ++S + D
Sbjct: 505 DRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 259/539 (48%), Gaps = 104/539 (19%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSAS-DIGDLS----HGYRLFVCLQYRTTFI 55
++ KQIQ+ L L D + K++ F S D S H R + ++F
Sbjct: 19 LRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVL-----SSFS 73
Query: 56 WNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVI 115
+NT++ +A ++P YK + + F P+ +TF + +AC S + G H V
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 116 RLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQ 175
++G+ +V N L+H Y C A K+F RDV+SWT +I G+ ++G A
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 176 MFDKMP-EKNAVSW-----------------------------------SAMINGYVQVD 199
F KM E N ++ +A+I+ YV+ +
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 200 LFKEAL-------------------------------EHFNYMQL-CGFRPNHAGIVGAL 227
+A+ + F+ MQ G +P+ + L
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 228 TACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVF 287
+ACA LGA+D GRW+H Y+ GI+ D +GTAI+DMYAKCG IETA +F+ + +++VF
Sbjct: 314 SACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 288 AYTSLISGLANHDQSASAIELFMRMQLEGVVPN-------------------------ES 322
+ +L+ GLA H ++ F M G PN +
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Query: 323 MSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDV- 381
S Y + P ++HYGC++DLL RAG+L+ A ++V+ MP++PD + GA+L+AC+ G +
Sbjct: 434 KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLM 493
Query: 382 DLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIE 440
+L KE ++S ++ + GV+VLLSNI+A+ +W+ V ++RR M+ + KVPG S IE
Sbjct: 494 ELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 21/233 (9%)
Query: 129 LLHLYATCNCMDPARKLFDMSVNRDVISWTSLING----YAKSGQISIARQMFDKMPEK- 183
LL L + C+ + +++ + RD++ +IN KS + +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 184 -NAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWI 242
++ S++ +++ Y D + + + GF P+ AC + +G+ I
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 243 HAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQS 302
H V + G DI + +++ Y CG AC VF MP RDV ++T +I+G
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 303 ASAIELFMRMQLEGVVPNESMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKV 355
A++ F +M +EP + Y C++ GR G L K +
Sbjct: 189 KEALDTFSKMD---------------VEPNLATYVCVLVSSGRVGCLSLGKGI 226
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 241/463 (52%), Gaps = 28/463 (6%)
Query: 3 QIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRG 62
++ +I +HL + I C + D ++ R+F +Q ++N MI+
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYAN--RVFSHIQNPNVLVFNAMIKC 76
Query: 63 FAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESY 122
++ P+++ + + M + YT++ +L++C+ S L G H ++IR G+
Sbjct: 77 YSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRL 136
Query: 123 DFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPE 182
+ G++ LY + M A+K+FD R+V+ W +I G+ SG + +F +M E
Sbjct: 137 GKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSE 196
Query: 183 KNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGALDQGRWI 242
++ VSW++MI+ + +EALE F M GF P+ A +V L A LG LD G+WI
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWI 256
Query: 243 HAYVDRNGIELDII-LGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQ 301
H+ + +G+ D I +G A++D Y K G +E A ++F M R+V ++ +LISG A + +
Sbjct: 257 HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGK 316
Query: 302 SASAIELFMRMQLEG-VVPNES------------------------MSEIYGIEPGVQHY 336
I+LF M EG V PNE+ M E + +E +HY
Sbjct: 317 GEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 337 GCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSL 396
G +VDL+ R+G + A K ++ MP+ + + G+LL+ACR HGDV L + LV+
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEP 436
Query: 397 DHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLI 439
+ G +VLLSN+YA +W VEKVR M+ N +RK G S I
Sbjct: 437 GNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 243/499 (48%), Gaps = 66/499 (13%)
Query: 7 IQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFAEK 66
++S L VS L D +A + G L ++F + R WN++I+ +
Sbjct: 278 LESELFVSNKLIDLYA-----------EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 67 NEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIRLGWESYDFVL 126
+P++A +L+++M S P+ T + + + +R GW
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW------- 379
Query: 127 NGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQMFDKMPEKNAV 186
L D+++ V+ YAK G + AR +F+ +P + +
Sbjct: 380 -----------------FLEDITIGNAVVVM------YAKLGLVDSARAVFNWLPNTDVI 416
Query: 187 SWSAMINGYVQVDLFKEALEHFNYMQLCG-FRPNHAGIVGALTACAFLGALDQGRWIHAY 245
SW+ +I+GY Q EA+E +N M+ G N V L AC+ GAL QG +H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 246 VDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISGLANHDQSASA 305
+ +NG+ LD+ + T++ DMY KCG +E A S+F +P + + +LI+ H A
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 306 IELFMRMQLEGVVPN------------------------ESMSEIYGIEPGVQHYGCLVD 341
+ LF M EGV P+ E M YGI P ++HYGC+VD
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 342 LLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGV 401
+ GRAG LE A K ++ M ++PD + GALL+ACRVHG+VDLGK E L E +H G
Sbjct: 597 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 402 HVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEI 461
HVLLSN+YAS +W GV+++R +RK PG S +EVD V F +G +T+ + EE+
Sbjct: 657 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 716
Query: 462 VLLLFGIDKHLKSLCFFDD 480
L + LK + + D
Sbjct: 717 YRELTALQAKLKMIGYVPD 735
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 49/325 (15%)
Query: 1 MKQIKQIQSHLTVSGTLWDPFAVGKIIG-FCSASDIGDLSHGYRLFVCLQYRTTFIWNTM 59
++ K + + L VS + + K++ +C +G+++ F +Q R + WN M
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCY---LGNVALARHTFDHIQNRDVYAWNLM 123
Query: 60 IRGFAE---KNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIR 116
I G+ +E I+ F+L+ ML S P+ TF +L+AC + G H ++
Sbjct: 124 ISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALK 178
Query: 117 LGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQM 176
G+ +V L+HLY+ Y G AR +
Sbjct: 179 FGFMWDVYVAASLIHLYSR----------------------------YKAVGN---ARIL 207
Query: 177 FDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRP-NHAGIVGALTACAFLGA 235
FD+MP ++ SW+AMI+GY Q KEAL N G R + +V L+AC G
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGD 262
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
++G IH+Y ++G+E ++ + +ID+YA+ G + VFD M RD+ ++ S+I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 296 LANHDQSASAIELFMRMQLEGVVPN 320
++Q AI LF M+L + P+
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPD 347
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 245/490 (50%), Gaps = 51/490 (10%)
Query: 21 FAVGKIIGFCSASDIGDLSHGYRLFVCLQYRTTFIWNTMIRGFA-EKNEPIKAFALYKQM 79
F + KII C S GD+ R+F ++ + T WN+++ G + + + ++A L+ ++
Sbjct: 62 FPLNKIIARCVRS--GDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 80 LRSDFLPNNYTFSFILRA-----------------CADTSCLFVGLICHAQVIRLG---- 118
D N S +R A + + G ++ +
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 119 --WESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYAKSGQISIARQM 176
E + N ++ Y C ++ A F ++ R V++WT++I GY K+ ++ +A M
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAM 239
Query: 177 FDKMP-EKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGALTACAFLGA 235
F M KN V+W+AMI+GYV+ ++ L+ F M G RPN +G+ AL C+ L A
Sbjct: 240 FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSA 299
Query: 236 LDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVFAYTSLISG 295
L GR IH V ++ + D+ T++I MY KCG + A +F+ M +DV A+ ++ISG
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 296 LANHDQSASAIELFMRMQLEGVVPN------------------------ESMSEIYGIEP 331
A H + A+ LF M + P+ ESM Y +EP
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 332 GVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESL 391
HY C+VDLLGRAG LE A K++R MP P V G LL ACRVH +V+L + E L
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
Query: 392 VERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGMEDNEVRKVPGCSLIEVDGVVCEFVSG 451
++ + + +V L+NIYAS +W V +VR+ M+++ V KVPG S IE+ V F S
Sbjct: 480 LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSS 539
Query: 452 ERTNVLMEEI 461
+R + ++ I
Sbjct: 540 DRIHPELDSI 549
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 2 KQIKQIQSHLTVSGTLWDPFAVGKIIG-FCSASDIGDLSHGYRLFVCLQYRTTFIWNTMI 60
+QI QI S T+ D A+ +I +C ++GD ++LF ++ + WN MI
Sbjct: 304 RQIHQIVSKSTLCN---DVTALTSLISMYCKCGELGD---AWKLFEVMKKKDVVAWNAMI 357
Query: 61 RGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVGLICHAQVIR 116
G+A+ KA L+++M+ + P+ TF +L AC + +G+ ++R
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
>sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protein At5g61800
OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1
Length = 499
Score = 252 bits (643), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 256/483 (53%), Gaps = 46/483 (9%)
Query: 1 MKQIKQIQSHLTVSGTLWDPF-----------AVGKIIGFCSASDIGDLSHGYRLFVCLQ 49
+K + Q + SG + + F A+ I SAS +S+ +F +
Sbjct: 17 LKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASK-EVVSYATSVFRFIT 75
Query: 50 YRTTFIWNTMIRGFAEKNEP--IKAFALYKQMLRSDFLPNNYTFSFILRACADTSCLFVG 107
+TF +NT+IR +EP + + + +M R P+ +TF F+ +ACA +
Sbjct: 76 NPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLT 134
Query: 108 LI--CHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSLINGYA 165
L+ H Q +R G S F LN L+ +Y+ +D A +LFD + RDV+++ LI+G
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLV 194
Query: 166 KSGQISIARQMFDKMPEKNAVSWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVG 225
K+ +I AR++FD MP ++ VSW+++I+GY Q++ +EA++ F+ M G +P++ IV
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 226 ALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRD 285
L+ACA G +G+ IH Y R + +D L T ++D YAKCG I+TA +F+ ++
Sbjct: 255 TLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 286 VFAYTSLISGLANHDQSASAIELFMRMQLEGVVPN------------------------E 321
+F + ++I+GLA H ++ F +M G+ P+ +
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 322 SMSEIYGIEPGVQHYGCLVDLLGRAGMLEAAKKVVREMPIEPDN----YVLGALLNACRV 377
M +Y + ++HYGC+ DLLGRAG++E A +++ +MP + N LL CR+
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 378 HGDVDLGKETVESLVERSLDHEGVHVLLSNIYASTEQWNGVEKVRRGME-DNEVRKVPGC 436
HG++++ ++ + S + GV+ ++ +YA+ E+W V KVR ++ D +V+K G
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGF 494
Query: 437 SLI 439
S +
Sbjct: 495 SKV 497
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,402,435
Number of Sequences: 539616
Number of extensions: 7695250
Number of successful extensions: 28016
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 21061
Number of HSP's gapped (non-prelim): 2220
length of query: 498
length of database: 191,569,459
effective HSP length: 122
effective length of query: 376
effective length of database: 125,736,307
effective search space: 47276851432
effective search space used: 47276851432
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)