Query 010886
Match_columns 498
No_of_seqs 321 out of 3333
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:20:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 2.1E-48 7.3E-53 438.7 25.8 384 35-489 19-518 (780)
2 3us3_A Calsequestrin-1; calciu 100.0 1.1E-38 3.9E-43 329.3 22.7 294 138-490 15-318 (367)
3 3apq_A DNAJ homolog subfamily 100.0 2.2E-39 7.5E-44 308.6 10.3 197 37-253 2-201 (210)
4 1sji_A Calsequestrin 2, calseq 100.0 2.1E-37 7.3E-42 317.5 23.0 288 137-490 12-316 (350)
5 2r2j_A Thioredoxin domain-cont 100.0 1.6E-35 5.6E-40 307.1 18.4 287 136-490 5-303 (382)
6 3f8u_A Protein disulfide-isome 100.0 1.9E-34 6.5E-39 307.4 23.6 291 137-494 2-312 (481)
7 2b5e_A Protein disulfide-isome 100.0 9.2E-34 3.1E-38 304.0 13.5 281 137-489 15-301 (504)
8 3ed3_A Protein disulfide-isome 100.0 4E-29 1.4E-33 250.7 15.7 228 137-378 18-282 (298)
9 3apo_A DNAJ homolog subfamily 99.9 6.6E-26 2.2E-30 255.3 24.8 288 138-488 442-737 (780)
10 3idv_A Protein disulfide-isome 99.9 1.5E-25 5.1E-30 215.9 18.2 208 137-366 16-238 (241)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 5.7E-22 2E-26 192.4 19.5 208 138-362 14-237 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.8 3.6E-20 1.2E-24 198.6 21.0 209 138-362 14-237 (519)
13 3h79_A Thioredoxin-like protei 99.8 1.4E-20 5E-25 163.6 8.4 105 137-252 16-126 (127)
14 2ywm_A Glutaredoxin-like prote 99.8 2.1E-19 7.3E-24 172.1 16.8 190 151-363 18-218 (229)
15 1a8l_A Protein disulfide oxido 99.8 1E-19 3.4E-24 173.8 13.8 195 152-363 21-224 (226)
16 3uem_A Protein disulfide-isome 99.8 2.7E-19 9.3E-24 183.1 14.8 210 138-364 119-356 (361)
17 2och_A Hypothetical protein DN 99.8 2.2E-19 7.5E-24 141.7 5.7 67 36-102 7-73 (73)
18 2dml_A Protein disulfide-isome 99.8 1.8E-18 6.1E-23 150.4 11.7 108 138-257 19-127 (130)
19 3zzx_A Thioredoxin; oxidoreduc 99.8 2.7E-19 9.2E-24 151.3 5.4 99 139-252 3-104 (105)
20 1hdj_A Human HSP40, HDJ-1; mol 99.8 5.8E-19 2E-23 140.8 5.5 70 36-105 2-73 (77)
21 2ctp_A DNAJ homolog subfamily 99.7 7.8E-19 2.7E-23 140.4 5.1 70 34-103 4-75 (78)
22 3ga4_A Dolichyl-diphosphooligo 99.7 2.4E-18 8.1E-23 158.7 8.9 106 138-252 20-151 (178)
23 2o37_A Protein SIS1; HSP40, J- 99.7 6.2E-19 2.1E-23 145.5 3.9 70 36-105 7-76 (92)
24 2dn9_A DNAJ homolog subfamily 99.7 1.3E-18 4.6E-23 139.3 5.3 70 34-103 4-76 (79)
25 2ej7_A HCG3 gene; HCG3 protein 99.7 1.5E-18 5.1E-23 140.1 5.2 71 34-104 6-80 (82)
26 2voc_A Thioredoxin; electron t 99.7 4.4E-18 1.5E-22 144.5 8.4 101 138-252 3-103 (112)
27 2dj1_A Protein disulfide-isome 99.7 4.5E-18 1.5E-22 149.8 8.3 102 138-253 19-123 (140)
28 3gnj_A Thioredoxin domain prot 99.7 1.8E-18 6.2E-23 145.7 5.3 102 138-252 6-108 (111)
29 1x5d_A Protein disulfide-isome 99.7 3.8E-18 1.3E-22 148.6 7.0 105 137-254 8-117 (133)
30 2cug_A Mkiaa0962 protein; DNAJ 99.7 2.6E-18 8.9E-23 140.6 4.9 69 35-103 15-85 (88)
31 2ctr_A DNAJ homolog subfamily 99.7 2.1E-18 7.2E-23 141.1 4.3 71 35-105 5-77 (88)
32 3uvt_A Thioredoxin domain-cont 99.7 2.5E-18 8.5E-23 144.7 4.8 102 137-252 6-110 (111)
33 3tco_A Thioredoxin (TRXA-1); d 99.7 4.9E-18 1.7E-22 142.2 6.2 102 138-252 6-107 (109)
34 3die_A Thioredoxin, TRX; elect 99.7 6.4E-18 2.2E-22 140.9 6.5 101 138-252 5-105 (106)
35 2djj_A PDI, protein disulfide- 99.7 1.7E-17 5.8E-22 142.2 8.8 101 138-252 9-115 (121)
36 1mek_A Protein disulfide isome 99.7 1.1E-17 3.9E-22 142.3 7.5 104 138-252 9-115 (120)
37 2trx_A Thioredoxin; electron t 99.7 1.2E-17 4.1E-22 140.0 7.4 102 138-252 4-106 (108)
38 3p2a_A Thioredoxin 2, putative 99.7 1.3E-17 4.3E-22 148.8 7.8 105 138-255 40-144 (148)
39 1nsw_A Thioredoxin, TRX; therm 99.7 6.8E-18 2.3E-22 140.8 5.4 102 138-252 2-103 (105)
40 1bq0_A DNAJ, HSP40; chaperone, 99.7 9.5E-18 3.2E-22 141.3 6.2 70 36-105 2-74 (103)
41 3qou_A Protein YBBN; thioredox 99.7 3.5E-17 1.2E-21 162.0 10.9 102 138-252 9-112 (287)
42 2e0q_A Thioredoxin; electron t 99.7 1.2E-17 4E-22 138.3 6.1 101 138-252 1-101 (104)
43 1x5e_A Thioredoxin domain cont 99.7 1.4E-17 4.9E-22 144.1 6.7 100 137-252 8-108 (126)
44 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.2E-17 4E-22 148.0 6.1 103 138-253 8-111 (140)
45 4euy_A Uncharacterized protein 99.7 1.1E-17 3.6E-22 140.3 5.4 97 142-252 7-103 (105)
46 2i4a_A Thioredoxin; acidophIle 99.7 2.2E-17 7.4E-22 137.9 7.3 102 138-252 4-106 (107)
47 2lgw_A DNAJ homolog subfamily 99.7 5.6E-18 1.9E-22 141.5 3.6 69 37-105 2-74 (99)
48 2dj3_A Protein disulfide-isome 99.7 2.7E-17 9.1E-22 143.5 7.7 105 137-252 8-116 (133)
49 2yzu_A Thioredoxin; redox prot 99.7 1.4E-17 4.7E-22 139.3 5.6 102 138-252 3-104 (109)
50 1t00_A Thioredoxin, TRX; redox 99.7 2.3E-17 7.9E-22 139.4 6.9 102 138-252 7-109 (112)
51 2ppt_A Thioredoxin-2; thiredox 99.7 1.8E-17 6.2E-22 149.8 6.6 102 138-252 49-150 (155)
52 2qgv_A Hydrogenase-1 operon pr 99.7 4.4E-18 1.5E-22 150.4 2.4 103 138-253 19-124 (140)
53 2dmx_A DNAJ homolog subfamily 99.7 8.2E-18 2.8E-22 138.8 3.8 72 34-105 6-81 (92)
54 1thx_A Thioredoxin, thioredoxi 99.7 3.7E-17 1.3E-21 138.3 7.9 102 138-252 9-111 (115)
55 2l5l_A Thioredoxin; structural 99.7 2.6E-17 9E-22 144.9 7.2 104 137-254 10-126 (136)
56 2o8v_B Thioredoxin 1; disulfid 99.7 2.2E-17 7.5E-22 144.2 6.5 103 137-252 23-126 (128)
57 2qsi_A Putative hydrogenase ex 99.7 1.4E-17 4.7E-22 146.7 5.2 102 138-252 17-121 (137)
58 3aps_A DNAJ homolog subfamily 99.7 1.2E-17 4.2E-22 143.4 4.8 107 137-256 4-115 (122)
59 2ctw_A DNAJ homolog subfamily 99.7 1.4E-17 4.9E-22 141.6 5.1 72 34-105 14-88 (109)
60 2c0g_A ERP29 homolog, windbeut 99.7 5.6E-17 1.9E-21 157.6 9.9 103 138-253 18-131 (248)
61 2ctq_A DNAJ homolog subfamily 99.7 1.1E-17 3.7E-22 143.1 4.1 71 34-104 17-90 (112)
62 2yua_A Williams-beuren syndrom 99.7 3.7E-17 1.3E-21 136.6 6.1 69 35-103 15-86 (99)
63 1dby_A Chloroplast thioredoxin 99.7 3E-17 1E-21 137.3 5.6 102 138-252 3-105 (107)
64 1fb6_A Thioredoxin M; electron 99.7 5.2E-17 1.8E-21 135.1 6.9 102 138-252 2-104 (105)
65 3hxs_A Thioredoxin, TRXP; elec 99.7 4.6E-17 1.6E-21 143.6 6.9 103 137-252 23-137 (141)
66 3qfa_C Thioredoxin; protein-pr 99.7 1.9E-17 6.6E-22 141.7 3.9 99 139-252 15-115 (116)
67 1oaz_A Thioredoxin 1; immune s 99.7 4.3E-17 1.5E-21 141.4 6.1 102 138-252 5-121 (123)
68 3idv_A Protein disulfide-isome 99.7 8.2E-17 2.8E-21 154.5 8.7 101 138-252 132-235 (241)
69 1w4v_A Thioredoxin, mitochondr 99.7 4.8E-17 1.7E-21 139.7 5.9 103 137-252 14-117 (119)
70 2i1u_A Thioredoxin, TRX, MPT46 99.7 3.7E-17 1.2E-21 140.0 5.0 103 137-252 13-116 (121)
71 2dj0_A Thioredoxin-related tra 99.7 1.5E-17 5E-22 146.6 1.6 102 138-252 9-119 (137)
72 2es7_A Q8ZP25_salty, putative 99.7 1.3E-16 4.5E-21 142.2 7.7 102 138-253 19-124 (142)
73 4f9z_D Endoplasmic reticulum r 99.6 2.7E-15 9.2E-20 143.9 17.1 201 138-363 11-223 (227)
74 1r26_A Thioredoxin; redox-acti 99.6 9.9E-17 3.4E-21 139.5 6.0 100 138-252 21-121 (125)
75 1wjz_A 1700030A21RIK protein; 99.6 3E-17 1E-21 136.0 2.3 66 36-101 15-89 (94)
76 3ul3_B Thioredoxin, thioredoxi 99.6 1.4E-16 4.8E-21 138.6 6.7 98 141-251 30-127 (128)
77 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.8E-16 6.2E-21 133.9 7.2 101 137-252 6-109 (111)
78 2qc7_A ERP31, ERP28, endoplasm 99.6 2E-16 6.7E-21 153.2 8.3 102 138-252 7-117 (240)
79 1gh2_A Thioredoxin-like protei 99.6 1.6E-16 5.6E-21 133.2 6.7 100 138-252 3-105 (107)
80 2hls_A Protein disulfide oxido 99.6 1.9E-15 6.5E-20 146.7 15.1 193 146-364 17-225 (243)
81 3uem_A Protein disulfide-isome 99.6 4.6E-14 1.6E-18 144.2 26.1 285 138-490 19-331 (361)
82 1xwb_A Thioredoxin; dimerizati 99.6 1.2E-16 4E-21 133.2 5.5 101 138-252 2-105 (106)
83 2av4_A Thioredoxin-like protei 99.6 1.1E-16 3.6E-21 143.5 5.4 106 138-252 23-137 (160)
84 3d6i_A Monothiol glutaredoxin- 99.6 1.9E-16 6.7E-21 133.8 6.5 101 138-252 2-107 (112)
85 1v98_A Thioredoxin; oxidoreduc 99.6 2.3E-16 7.9E-21 139.3 7.2 103 137-252 34-136 (140)
86 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 4.2E-17 1.4E-21 138.8 2.1 68 36-103 14-88 (109)
87 3dxb_A Thioredoxin N-terminall 99.6 2.1E-16 7.3E-21 151.1 7.0 103 138-253 14-117 (222)
88 2h8l_A Protein disulfide-isome 99.6 4.3E-15 1.5E-19 144.8 16.3 187 255-493 4-207 (252)
89 1ep7_A Thioredoxin CH1, H-type 99.6 1.2E-16 4.3E-21 134.7 4.3 101 138-252 4-109 (112)
90 3f3q_A Thioredoxin-1; His TAG, 99.6 1.7E-16 5.8E-21 134.2 4.8 99 139-252 10-108 (109)
91 3m9j_A Thioredoxin; oxidoreduc 99.6 1.9E-16 6.3E-21 131.9 4.8 96 142-252 7-104 (105)
92 2xc2_A Thioredoxinn; oxidoredu 99.6 3.1E-16 1E-20 133.9 5.2 99 138-252 15-116 (117)
93 1gh6_A Large T antigen; tumor 99.6 7.5E-17 2.6E-21 137.7 0.9 65 36-101 7-73 (114)
94 2vlu_A Thioredoxin, thioredoxi 99.6 2.8E-16 9.7E-21 134.8 4.5 100 138-252 15-118 (122)
95 1syr_A Thioredoxin; SGPP, stru 99.6 2.3E-16 7.7E-21 133.7 3.7 100 138-252 11-110 (112)
96 1faa_A Thioredoxin F; electron 99.6 5.3E-16 1.8E-20 133.7 6.1 100 138-252 20-122 (124)
97 2l57_A Uncharacterized protein 99.6 8.7E-16 3E-20 132.8 7.4 102 138-252 6-115 (126)
98 2l6c_A Thioredoxin; oxidoreduc 99.6 4.3E-16 1.5E-20 131.9 5.0 99 139-252 6-104 (110)
99 2ys8_A RAB-related GTP-binding 99.6 3.6E-16 1.2E-20 128.2 4.3 60 36-95 26-87 (90)
100 3gix_A Thioredoxin-like protei 99.6 3.2E-16 1.1E-20 140.7 4.0 103 141-252 9-119 (149)
101 2yj7_A LPBCA thioredoxin; oxid 99.4 8.4E-17 2.9E-21 133.6 0.0 102 138-252 3-105 (106)
102 2vim_A Thioredoxin, TRX; thior 99.6 6.7E-16 2.3E-20 128.1 5.3 99 139-252 2-103 (104)
103 1faf_A Large T antigen; J doma 99.6 3.6E-16 1.2E-20 125.0 3.3 65 36-102 10-76 (79)
104 2pf4_E Small T antigen; PP2A, 99.6 7.7E-17 2.6E-21 147.0 -1.1 65 36-101 10-76 (174)
105 2oe3_A Thioredoxin-3; electron 99.6 4.7E-16 1.6E-20 132.8 3.8 98 139-251 15-113 (114)
106 1zma_A Bacterocin transport ac 99.6 1.5E-16 5E-21 136.2 -0.1 101 138-250 14-117 (118)
107 4f9z_D Endoplasmic reticulum r 99.6 2.7E-14 9.3E-19 136.9 15.1 177 262-490 14-199 (227)
108 2j23_A Thioredoxin; immune pro 99.6 1.1E-15 3.7E-20 131.7 4.7 101 138-252 17-119 (121)
109 3ec3_A Protein disulfide-isome 99.6 3.8E-14 1.3E-18 138.0 16.2 186 255-493 4-206 (250)
110 3emx_A Thioredoxin; structural 99.6 4E-16 1.4E-20 137.3 1.8 102 137-252 17-124 (135)
111 2l6l_A DNAJ homolog subfamily 99.6 9E-16 3.1E-20 138.8 4.1 68 34-101 7-83 (155)
112 2wz9_A Glutaredoxin-3; protein 99.6 1.5E-15 5.2E-20 136.4 5.1 101 138-253 14-117 (153)
113 3d22_A TRXH4, thioredoxin H-ty 99.6 2.4E-15 8.4E-20 132.2 5.5 105 138-257 26-135 (139)
114 3evi_A Phosducin-like protein 99.6 1.8E-15 6.2E-20 130.5 4.5 98 138-252 5-112 (118)
115 1a8l_A Protein disulfide oxido 99.5 2.9E-15 9.9E-20 142.7 5.6 101 139-252 119-224 (226)
116 1xfl_A Thioredoxin H1; AT3G510 99.5 2.4E-15 8.1E-20 130.4 4.0 100 138-252 18-122 (124)
117 2b5e_A Protein disulfide-isome 99.5 5.5E-15 1.9E-19 158.0 7.2 103 137-252 359-465 (504)
118 1qgv_A Spliceosomal protein U5 99.5 2.4E-15 8E-20 133.9 3.4 102 142-252 10-119 (142)
119 3qcp_A QSOX from trypanosoma b 99.5 1.1E-15 3.8E-20 160.5 1.2 104 137-252 24-137 (470)
120 2vm1_A Thioredoxin, thioredoxi 99.5 4.6E-15 1.6E-19 126.0 4.7 101 138-253 8-113 (118)
121 2dbc_A PDCL2, unnamed protein 99.5 5.2E-15 1.8E-19 130.3 4.8 99 137-252 11-119 (135)
122 1iur_A KIAA0730 protein; DNAJ 99.5 2.1E-15 7.3E-20 122.8 2.1 63 34-96 13-79 (88)
123 3lz8_A Putative chaperone DNAJ 99.5 1E-15 3.4E-20 154.5 0.0 67 36-102 27-95 (329)
124 3cxg_A Putative thioredoxin; m 99.5 5.7E-15 2E-19 129.6 4.3 100 137-252 21-127 (133)
125 3hho_A CO-chaperone protein HS 99.5 5.7E-15 1.9E-19 135.9 3.4 65 35-99 2-76 (174)
126 1ti3_A Thioredoxin H, PTTRXH1; 99.5 4.7E-15 1.6E-19 125.0 2.1 100 138-252 6-110 (113)
127 2f51_A Thioredoxin; electron t 99.5 7.7E-15 2.6E-19 125.9 3.1 100 138-252 5-111 (118)
128 2kuc_A Putative disulphide-iso 99.5 1.6E-14 5.4E-19 125.2 4.8 103 139-252 9-119 (130)
129 2qwo_B Putative tyrosine-prote 99.5 1.2E-14 4.2E-19 118.7 3.5 53 37-89 33-91 (92)
130 3uo3_A J-type CO-chaperone JAC 99.5 1.1E-14 3.8E-19 134.5 3.0 72 31-102 5-86 (181)
131 1wmj_A Thioredoxin H-type; str 99.5 6.6E-15 2.3E-19 127.4 1.2 101 138-253 16-121 (130)
132 1fo5_A Thioredoxin; disulfide 99.5 9.4E-14 3.2E-18 110.8 7.8 82 154-252 3-84 (85)
133 1n4c_A Auxilin; four helix bun 99.5 2.4E-14 8.1E-19 131.3 4.8 60 37-96 117-182 (182)
134 1fpo_A HSC20, chaperone protei 99.5 1.8E-14 6.1E-19 132.1 3.4 63 38-100 2-74 (171)
135 1nho_A Probable thioredoxin; b 99.5 1.3E-13 4.4E-18 110.0 7.8 81 155-252 3-83 (85)
136 2trc_P Phosducin, MEKA, PP33; 99.5 8E-15 2.7E-19 139.9 0.7 100 138-252 101-211 (217)
137 3bvo_A CO-chaperone protein HS 99.4 2.9E-14 9.9E-19 134.5 4.3 64 35-98 41-114 (207)
138 2fwh_A Thiol:disulfide interch 99.4 4.5E-14 1.5E-18 123.8 4.9 102 142-252 18-126 (134)
139 2guz_A Mitochondrial import in 99.4 2E-14 6.9E-19 112.4 2.3 58 36-94 13-71 (71)
140 2djk_A PDI, protein disulfide- 99.4 6.9E-14 2.4E-18 122.7 5.1 101 138-253 8-114 (133)
141 2ywm_A Glutaredoxin-like prote 99.4 5.1E-14 1.7E-18 134.5 4.6 99 138-253 120-219 (229)
142 3ag7_A Putative uncharacterize 99.4 3.2E-14 1.1E-18 119.9 1.7 55 36-91 40-104 (106)
143 3fk8_A Disulphide isomerase; A 99.4 1E-13 3.6E-18 120.8 4.9 92 151-252 27-131 (133)
144 1a0r_P Phosducin, MEKA, PP33; 99.4 4E-14 1.4E-18 137.3 2.5 100 138-252 114-224 (245)
145 3kp8_A Vkorc1/thioredoxin doma 99.4 3.8E-14 1.3E-18 119.8 0.9 78 153-251 12-92 (106)
146 2hls_A Protein disulfide oxido 99.4 4.2E-13 1.4E-17 130.1 8.3 84 152-252 137-224 (243)
147 1wou_A Thioredoxin -related pr 99.4 8E-14 2.7E-18 120.4 2.0 99 138-250 7-121 (123)
148 1sji_A Calsequestrin 2, calseq 99.4 5.7E-12 2E-16 128.4 16.0 202 138-364 125-345 (350)
149 2lst_A Thioredoxin; structural 99.0 6.1E-14 2.1E-18 121.7 0.0 100 144-252 10-114 (130)
150 3us3_A Calsequestrin-1; calciu 99.4 6.5E-12 2.2E-16 129.0 15.2 209 138-369 127-352 (367)
151 3f8u_A Protein disulfide-isome 99.4 9.8E-11 3.3E-15 124.1 24.4 285 138-490 112-435 (481)
152 2h8l_A Protein disulfide-isome 99.3 3.2E-11 1.1E-15 117.3 16.2 205 138-368 8-233 (252)
153 3f9u_A Putative exported cytoc 99.3 9.6E-13 3.3E-17 120.0 4.3 104 139-252 29-164 (172)
154 3dml_A Putative uncharacterize 99.3 7.5E-13 2.6E-17 113.3 2.1 88 152-253 17-109 (116)
155 1ilo_A Conserved hypothetical 99.3 2.7E-12 9.2E-17 100.6 4.9 73 157-249 3-76 (77)
156 3iv4_A Putative oxidoreductase 99.2 1.1E-12 3.7E-17 111.1 1.5 100 139-249 9-111 (112)
157 1sen_A Thioredoxin-like protei 99.2 1.5E-12 5.2E-17 118.4 0.9 100 144-253 37-147 (164)
158 2ju5_A Thioredoxin disulfide i 99.2 1.5E-11 5.1E-16 110.4 6.6 97 145-252 35-150 (154)
159 2b5x_A YKUV protein, TRXY; thi 99.2 3.8E-11 1.3E-15 105.2 8.3 103 140-252 16-143 (148)
160 3ec3_A Protein disulfide-isome 99.2 6.7E-10 2.3E-14 107.8 17.1 205 138-368 8-231 (250)
161 1zzo_A RV1677; thioredoxin fol 99.2 5.3E-11 1.8E-15 102.6 8.0 100 141-252 13-133 (136)
162 1lu4_A Soluble secreted antige 99.2 5.3E-11 1.8E-15 102.9 7.9 90 151-252 22-134 (136)
163 3kp9_A Vkorc1/thioredoxin doma 99.1 1.2E-11 4E-16 122.6 1.1 76 156-252 200-278 (291)
164 3erw_A Sporulation thiol-disul 99.1 1.1E-10 3.9E-15 101.7 7.3 88 152-249 33-144 (145)
165 3raz_A Thioredoxin-related pro 99.1 1.9E-10 6.5E-15 102.0 7.3 97 152-252 23-138 (151)
166 3ph9_A Anterior gradient prote 99.0 1E-10 3.5E-15 105.0 4.9 88 151-252 42-143 (151)
167 3or5_A Thiol:disulfide interch 99.0 3.1E-10 1E-14 101.7 7.5 109 141-253 22-150 (165)
168 2h30_A Thioredoxin, peptide me 99.0 7.2E-11 2.5E-15 105.8 3.3 104 139-252 24-154 (164)
169 3hcz_A Possible thiol-disulfid 99.0 7.3E-10 2.5E-14 97.0 8.6 91 152-252 30-144 (148)
170 3fkf_A Thiol-disulfide oxidore 99.0 8.8E-10 3E-14 96.5 8.8 88 152-252 32-144 (148)
171 2fgx_A Putative thioredoxin; N 99.0 2.2E-10 7.5E-15 96.6 4.4 77 155-249 30-106 (107)
172 4evm_A Thioredoxin family prot 99.0 5.4E-10 1.9E-14 96.0 6.8 90 152-251 21-136 (138)
173 2f9s_A Thiol-disulfide oxidore 99.0 6.5E-10 2.2E-14 98.3 7.3 91 152-252 25-136 (151)
174 3ira_A Conserved protein; meth 99.0 5.5E-11 1.9E-15 109.1 0.3 76 143-227 29-116 (173)
175 2lja_A Putative thiol-disulfid 99.0 1.4E-09 4.9E-14 96.0 9.2 91 152-252 29-141 (152)
176 2r2j_A Thioredoxin domain-cont 99.0 1.5E-08 5.1E-13 104.3 17.5 202 138-368 120-332 (382)
177 2l5o_A Putative thioredoxin; s 98.9 2.2E-09 7.6E-14 94.8 8.8 93 152-254 27-141 (153)
178 3gl3_A Putative thiol:disulfid 98.9 2.5E-09 8.5E-14 94.4 8.3 91 152-252 27-140 (152)
179 1kng_A Thiol:disulfide interch 98.9 1.4E-09 4.9E-14 96.3 5.6 90 151-252 40-150 (156)
180 3ha9_A Uncharacterized thiored 98.9 4.1E-09 1.4E-13 94.7 8.2 88 152-252 36-162 (165)
181 2lrn_A Thiol:disulfide interch 98.9 3.9E-09 1.3E-13 93.6 7.9 88 152-252 28-139 (152)
182 3ia1_A THIO-disulfide isomeras 98.9 3.3E-09 1.1E-13 93.9 7.4 87 154-252 31-142 (154)
183 2b1k_A Thiol:disulfide interch 98.8 1.8E-09 6.1E-14 97.3 5.3 89 151-252 49-158 (168)
184 1ttz_A Conserved hypothetical 98.8 7.9E-10 2.7E-14 89.7 2.1 73 157-252 3-75 (87)
185 3lwa_A Secreted thiol-disulfid 98.8 6.7E-09 2.3E-13 95.1 8.4 97 152-252 58-179 (183)
186 3lor_A Thiol-disulfide isomera 98.8 4.2E-09 1.4E-13 93.8 6.7 92 152-253 29-154 (160)
187 1i5g_A Tryparedoxin II; electr 98.8 3.8E-09 1.3E-13 92.7 5.9 71 152-228 27-122 (144)
188 3eyt_A Uncharacterized protein 98.8 1.5E-08 5E-13 90.1 9.7 92 152-253 27-151 (158)
189 1z6n_A Hypothetical protein PA 98.8 1.3E-09 4.6E-14 99.4 2.8 70 152-228 53-122 (167)
190 1o8x_A Tryparedoxin, TRYX, TXN 98.8 6E-09 2E-13 91.7 5.9 71 152-228 27-122 (146)
191 3kcm_A Thioredoxin family prot 98.8 7.4E-09 2.5E-13 91.5 6.3 91 152-252 27-141 (154)
192 3eur_A Uncharacterized protein 98.8 6.2E-09 2.1E-13 91.1 5.5 92 153-250 31-141 (142)
193 3hdc_A Thioredoxin family prot 98.7 1.1E-08 3.8E-13 91.2 6.5 91 152-252 40-150 (158)
194 1o73_A Tryparedoxin; electron 98.7 7.5E-09 2.5E-13 90.5 5.1 71 152-228 27-122 (144)
195 3ewl_A Uncharacterized conserv 98.7 9.5E-09 3.2E-13 89.6 5.5 94 152-252 26-139 (142)
196 2lrt_A Uncharacterized protein 98.7 2.8E-08 9.6E-13 88.4 6.8 88 152-249 34-143 (152)
197 2dlx_A UBX domain-containing p 98.7 2.5E-08 8.6E-13 89.5 6.3 98 144-252 29-134 (153)
198 3fw2_A Thiol-disulfide oxidore 98.7 7.3E-08 2.5E-12 85.0 9.3 88 152-252 32-146 (150)
199 2hyx_A Protein DIPZ; thioredox 98.7 4.1E-08 1.4E-12 100.0 8.6 92 152-253 81-198 (352)
200 2cvb_A Probable thiol-disulfid 98.6 5.4E-08 1.8E-12 89.4 8.5 90 152-253 32-158 (188)
201 2ywi_A Hypothetical conserved 98.6 4.5E-08 1.5E-12 90.3 7.6 91 154-254 47-174 (196)
202 3s9f_A Tryparedoxin; thioredox 98.6 2.7E-08 9.1E-13 90.0 5.9 68 152-225 47-137 (165)
203 1jfu_A Thiol:disulfide interch 98.6 6.5E-08 2.2E-12 88.6 7.8 98 152-253 59-179 (186)
204 3kh7_A Thiol:disulfide interch 98.6 4.1E-08 1.4E-12 89.6 5.6 88 152-252 57-165 (176)
205 2y4t_A DNAJ homolog subfamily 98.6 3E-08 1E-12 101.8 5.1 63 36-98 381-449 (450)
206 2lus_A Thioredoxion; CR-Trp16, 98.0 6.8E-09 2.3E-13 90.5 0.0 70 153-228 25-121 (143)
207 3ed3_A Protein disulfide-isome 98.5 1.1E-06 3.6E-11 87.5 15.3 161 262-462 22-202 (298)
208 2k6v_A Putative cytochrome C o 98.5 4.6E-08 1.6E-12 88.0 4.5 97 152-252 34-171 (172)
209 1hyu_A AHPF, alkyl hydroperoxi 98.5 4E-08 1.4E-12 105.4 4.7 94 140-251 103-197 (521)
210 2k8s_A Thioredoxin; dimer, str 98.5 1.1E-08 3.7E-13 81.0 0.2 61 157-227 4-64 (80)
211 2l4c_A Endoplasmic reticulum r 98.5 5.2E-07 1.8E-11 78.0 10.5 101 255-365 17-124 (124)
212 2e7p_A Glutaredoxin; thioredox 98.5 4.6E-09 1.6E-13 88.9 -2.5 89 146-252 13-106 (116)
213 2ggt_A SCO1 protein homolog, m 98.5 5.9E-07 2E-11 80.0 10.0 91 152-252 22-159 (164)
214 3cmi_A Peroxiredoxin HYR1; thi 98.5 2.7E-07 9.4E-12 83.4 7.8 96 152-252 31-166 (171)
215 2rli_A SCO2 protein homolog, m 98.4 9.9E-07 3.4E-11 79.1 10.9 91 152-252 25-162 (171)
216 2ls5_A Uncharacterized protein 97.8 2.3E-08 7.8E-13 89.1 0.0 95 152-251 32-145 (159)
217 2vup_A Glutathione peroxidase- 98.4 5.3E-07 1.8E-11 83.1 9.0 98 152-253 47-184 (190)
218 1wjk_A C330018D20RIK protein; 98.4 7.8E-08 2.7E-12 79.8 2.8 81 152-252 14-94 (100)
219 3u5r_E Uncharacterized protein 98.4 4.7E-07 1.6E-11 85.6 8.6 89 153-253 58-186 (218)
220 4fo5_A Thioredoxin-like protei 98.4 1.6E-07 5.3E-12 82.2 4.9 85 152-249 31-140 (143)
221 1ego_A Glutaredoxin; electron 98.4 2.9E-07 9.9E-12 73.0 5.3 79 157-252 3-82 (85)
222 2guz_B Mitochondrial import in 98.4 2.2E-07 7.7E-12 70.5 4.2 51 38-89 5-58 (65)
223 3dwv_A Glutathione peroxidase- 98.4 1.2E-06 4.1E-11 80.6 9.8 97 152-252 45-181 (187)
224 2p5q_A Glutathione peroxidase 98.4 5.6E-07 1.9E-11 80.6 7.2 97 152-252 31-166 (170)
225 2p31_A CL683, glutathione pero 98.3 8.8E-07 3E-11 81.0 7.3 97 152-252 48-179 (181)
226 1eej_A Thiol:disulfide interch 98.3 6E-07 2.1E-11 84.9 5.5 84 152-252 85-209 (216)
227 1we0_A Alkyl hydroperoxide red 98.3 2.1E-06 7.3E-11 78.7 8.6 91 152-252 30-155 (187)
228 2l4c_A Endoplasmic reticulum r 98.2 8.7E-07 3E-11 76.5 4.8 95 138-252 23-122 (124)
229 2v1m_A Glutathione peroxidase; 98.2 1.8E-06 6.1E-11 77.2 7.1 97 152-252 30-165 (169)
230 1zof_A Alkyl hydroperoxide-red 98.2 2.4E-06 8.1E-11 79.2 8.0 91 152-252 32-159 (198)
231 3drn_A Peroxiredoxin, bacterio 98.2 1.8E-06 6.1E-11 77.2 6.4 89 153-251 28-146 (161)
232 3gyk_A 27KDA outer membrane pr 98.2 1.6E-06 5.6E-11 78.5 5.8 86 151-252 20-171 (175)
233 1xvw_A Hypothetical protein RV 98.1 2.4E-06 8.2E-11 75.9 6.2 88 154-251 37-157 (160)
234 2bmx_A Alkyl hydroperoxidase C 98.1 3.9E-06 1.3E-10 77.6 7.7 91 152-252 44-168 (195)
235 1t3b_A Thiol:disulfide interch 98.1 1.6E-06 5.5E-11 81.7 4.7 83 152-251 85-208 (211)
236 2obi_A PHGPX, GPX-4, phospholi 98.1 3E-06 1E-10 77.4 5.7 96 152-251 46-181 (183)
237 1qmv_A Human thioredoxin perox 98.1 5.9E-06 2E-10 76.5 7.6 91 152-252 33-161 (197)
238 3kij_A Probable glutathione pe 98.1 7.5E-06 2.6E-10 74.6 7.9 97 152-252 37-168 (180)
239 2f8a_A Glutathione peroxidase 98.1 6.9E-06 2.4E-10 77.1 7.6 43 152-194 46-89 (208)
240 1h75_A Glutaredoxin-like prote 98.0 1.2E-06 3.9E-11 68.9 1.8 71 157-249 3-73 (81)
241 1un2_A DSBA, thiol-disulfide i 98.0 6.9E-07 2.4E-11 83.5 -0.2 45 152-196 112-159 (197)
242 2gs3_A PHGPX, GPX-4, phospholi 98.0 5.6E-06 1.9E-10 75.8 5.7 43 152-194 48-91 (185)
243 1xzo_A BSSCO, hypothetical pro 98.0 2.9E-05 9.9E-10 69.6 10.3 97 152-252 32-170 (174)
244 1r7h_A NRDH-redoxin; thioredox 98.0 6.3E-06 2.1E-10 63.4 4.8 71 157-249 3-73 (75)
245 2qc7_A ERP31, ERP28, endoplasm 98.0 3.2E-05 1.1E-09 74.4 10.4 99 262-364 10-118 (240)
246 2h01_A 2-Cys peroxiredoxin; th 97.9 8E-06 2.7E-10 75.2 5.8 91 152-252 30-157 (192)
247 1zye_A Thioredoxin-dependent p 97.9 2.5E-05 8.6E-10 73.9 8.7 90 153-252 56-183 (220)
248 1uul_A Tryparedoxin peroxidase 97.9 9.6E-06 3.3E-10 75.4 5.4 96 153-252 36-163 (202)
249 3zzx_A Thioredoxin; oxidoreduc 97.9 3.7E-05 1.3E-09 64.0 7.9 97 262-364 5-105 (105)
250 1kte_A Thioltransferase; redox 97.9 2.2E-06 7.6E-11 70.9 0.2 68 147-227 6-77 (105)
251 2b7k_A SCO1 protein; metalloch 97.8 4.9E-05 1.7E-09 70.5 9.3 95 152-256 40-181 (200)
252 3hd5_A Thiol:disulfide interch 97.8 1.4E-05 4.9E-10 73.7 5.4 44 151-194 23-66 (195)
253 3ga4_A Dolichyl-diphosphooligo 97.8 6.8E-05 2.3E-09 68.7 9.7 113 262-378 23-166 (178)
254 2qsi_A Putative hydrogenase ex 97.8 9.1E-05 3.1E-09 64.8 9.4 96 262-363 20-121 (137)
255 1nm3_A Protein HI0572; hybrid, 97.8 0.00024 8E-09 67.8 12.8 56 152-207 32-91 (241)
256 3ztl_A Thioredoxin peroxidase; 97.8 2.1E-05 7.3E-10 74.4 5.4 97 152-252 68-196 (222)
257 2jsy_A Probable thiol peroxida 97.8 8.2E-05 2.8E-09 66.4 9.0 90 152-252 43-165 (167)
258 2c0g_A ERP29 homolog, windbeut 97.7 0.00015 5.1E-09 70.0 11.0 98 262-364 21-131 (248)
259 2znm_A Thiol:disulfide interch 97.7 8.5E-05 2.9E-09 68.2 8.9 42 152-193 21-62 (195)
260 3h79_A Thioredoxin-like protei 97.7 0.00011 3.9E-09 62.4 9.1 98 262-363 20-126 (127)
261 3h93_A Thiol:disulfide interch 97.7 2.5E-05 8.4E-10 71.9 4.5 42 152-193 24-65 (192)
262 2i81_A 2-Cys peroxiredoxin; st 97.7 6.2E-05 2.1E-09 70.8 7.2 91 152-252 51-178 (213)
263 1v58_A Thiol:disulfide interch 97.7 2.5E-05 8.6E-10 75.0 4.6 88 152-252 96-231 (241)
264 2qgv_A Hydrogenase-1 operon pr 97.6 0.00013 4.3E-09 64.1 8.2 96 262-364 22-124 (140)
265 3gkn_A Bacterioferritin comigr 97.6 4.2E-05 1.4E-09 68.0 5.2 97 153-252 35-160 (163)
266 2djk_A PDI, protein disulfide- 97.6 0.00012 4E-09 63.3 7.9 108 256-368 5-118 (133)
267 2dml_A Protein disulfide-isome 97.6 0.00038 1.3E-08 59.1 10.4 82 280-363 38-122 (130)
268 2c0d_A Thioredoxin peroxidase 97.6 0.00012 4.2E-09 69.3 7.6 98 152-252 55-182 (221)
269 2klx_A Glutaredoxin; thioredox 97.6 6.8E-05 2.3E-09 59.9 4.9 70 157-251 8-78 (89)
270 2a4v_A Peroxiredoxin DOT5; yea 97.6 5.7E-05 2E-09 67.0 4.9 95 153-252 35-152 (159)
271 2es7_A Q8ZP25_salty, putative 97.5 0.00023 7.9E-09 62.6 8.0 96 262-364 22-124 (142)
272 1xvq_A Thiol peroxidase; thior 97.5 0.00045 1.5E-08 62.4 9.4 41 152-194 43-84 (175)
273 2pn8_A Peroxiredoxin-4; thiore 97.4 0.00018 6.1E-09 67.5 6.9 98 152-252 47-175 (211)
274 2voc_A Thioredoxin; electron t 97.4 0.00057 2E-08 56.6 9.1 84 279-365 18-105 (112)
275 3tco_A Thioredoxin (TRXA-1); d 97.4 0.00058 2E-08 55.6 9.0 95 262-363 9-107 (109)
276 3q6o_A Sulfhydryl oxidase 1; p 97.4 0.00097 3.3E-08 63.5 11.6 83 280-363 33-125 (244)
277 2cq9_A GLRX2 protein, glutared 97.4 3.2E-05 1.1E-09 67.0 0.7 66 146-227 20-89 (130)
278 2dj1_A Protein disulfide-isome 97.4 0.001 3.4E-08 57.2 10.2 92 268-366 27-125 (140)
279 3bj5_A Protein disulfide-isome 97.4 0.00016 5.4E-09 64.1 5.0 87 360-489 8-99 (147)
280 3qfa_C Thioredoxin; protein-pr 97.4 0.0011 3.6E-08 55.5 9.9 94 264-362 18-114 (116)
281 1n8j_A AHPC, alkyl hydroperoxi 97.3 0.00032 1.1E-08 64.3 7.0 97 153-252 30-154 (186)
282 2i3y_A Epididymal secretory gl 97.3 0.0011 3.9E-08 62.3 11.1 42 152-194 55-97 (215)
283 1x5d_A Protein disulfide-isome 97.3 0.001 3.6E-08 56.4 9.8 82 279-363 26-115 (133)
284 3m9j_A Thioredoxin; oxidoreduc 97.3 0.001 3.4E-08 53.9 9.1 95 262-362 5-103 (105)
285 4g2e_A Peroxiredoxin; redox pr 97.3 0.00022 7.5E-09 63.4 5.5 100 152-251 29-155 (157)
286 1x5e_A Thioredoxin domain cont 97.3 0.0011 3.7E-08 56.0 9.5 99 262-369 12-114 (126)
287 1w4v_A Thioredoxin, mitochondr 97.3 0.0007 2.4E-08 56.8 8.0 67 293-362 50-116 (119)
288 2i4a_A Thioredoxin; acidophIle 97.3 0.0008 2.7E-08 54.6 8.0 83 278-363 20-106 (107)
289 3t58_A Sulfhydryl oxidase 1; o 97.3 0.0037 1.3E-07 66.6 15.1 84 280-363 33-125 (519)
290 1mek_A Protein disulfide isome 97.3 0.0013 4.4E-08 54.4 9.3 97 262-364 12-116 (120)
291 3gnj_A Thioredoxin domain prot 97.2 0.0008 2.7E-08 55.1 7.8 81 280-363 25-108 (111)
292 3hxs_A Thioredoxin, TRXP; elec 97.2 0.001 3.6E-08 57.2 8.9 83 278-363 51-137 (141)
293 2hze_A Glutaredoxin-1; thiored 97.2 6.1E-05 2.1E-09 63.5 0.8 64 148-227 14-84 (114)
294 2ht9_A Glutaredoxin-2; thiored 97.2 5E-05 1.7E-09 67.3 0.2 66 146-227 42-111 (146)
295 1xwb_A Thioredoxin; dimerizati 97.2 0.0017 5.9E-08 52.4 9.5 97 262-363 5-105 (106)
296 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00015 5E-09 56.6 2.8 71 157-251 3-74 (82)
297 3apq_A DNAJ homolog subfamily 97.2 0.0015 5E-08 60.8 10.2 90 280-372 117-209 (210)
298 1oaz_A Thioredoxin 1; immune s 97.2 0.00063 2.2E-08 57.8 7.0 69 292-363 53-121 (123)
299 3uvt_A Thioredoxin domain-cont 97.2 0.0013 4.5E-08 53.6 8.8 95 262-363 10-110 (111)
300 4gqc_A Thiol peroxidase, perox 97.2 0.00026 8.7E-09 63.6 4.6 102 151-252 31-158 (164)
301 3ixr_A Bacterioferritin comigr 97.2 0.00032 1.1E-08 63.7 5.3 96 153-252 51-176 (179)
302 4euy_A Uncharacterized protein 97.2 0.00056 1.9E-08 55.9 6.3 82 278-363 18-103 (105)
303 1thx_A Thioredoxin, thioredoxi 97.2 0.0013 4.6E-08 54.0 8.7 68 293-363 44-111 (115)
304 3c1r_A Glutaredoxin-1; oxidize 97.2 9E-05 3.1E-09 63.0 1.4 69 146-227 18-91 (118)
305 2yzu_A Thioredoxin; redox prot 97.2 0.0015 5E-08 53.0 8.7 95 262-363 6-104 (109)
306 3die_A Thioredoxin, TRX; elect 97.2 0.0012 4.2E-08 53.3 8.2 82 279-363 20-105 (106)
307 1z6m_A Conserved hypothetical 97.2 0.00041 1.4E-08 62.5 5.7 42 152-193 26-69 (175)
308 2trx_A Thioredoxin; electron t 97.2 0.0011 3.7E-08 54.1 7.8 83 278-363 20-106 (108)
309 3qou_A Protein YBBN; thioredox 97.2 0.0024 8.2E-08 62.1 11.6 98 262-363 12-112 (287)
310 2r37_A Glutathione peroxidase 97.2 0.0021 7.1E-08 60.1 10.7 42 152-194 37-79 (207)
311 3ul3_B Thioredoxin, thioredoxi 97.2 0.00099 3.4E-08 56.6 7.7 83 278-363 42-128 (128)
312 3qpm_A Peroxiredoxin; oxidored 97.1 0.00076 2.6E-08 64.6 7.6 98 152-252 76-204 (240)
313 3aps_A DNAJ homolog subfamily 97.1 0.00064 2.2E-08 57.0 6.0 68 293-363 40-111 (122)
314 1nsw_A Thioredoxin, TRX; therm 97.1 0.0012 4E-08 53.6 7.3 67 293-362 36-102 (105)
315 2yan_A Glutaredoxin-3; oxidore 97.1 0.00014 4.7E-09 60.3 1.5 66 146-227 10-81 (105)
316 2e0q_A Thioredoxin; electron t 97.1 0.002 6.8E-08 51.6 8.6 89 268-363 9-101 (104)
317 3bj5_A Protein disulfide-isome 97.1 0.001 3.5E-08 58.7 7.3 106 138-253 16-126 (147)
318 2oe3_A Thioredoxin-3; electron 97.1 0.002 7E-08 53.7 8.8 93 262-362 17-113 (114)
319 3tjj_A Peroxiredoxin-4; thiore 97.1 0.0011 3.7E-08 64.2 8.0 98 152-252 90-218 (254)
320 3ic4_A Glutaredoxin (GRX-1); s 97.1 0.00027 9.3E-09 56.6 3.1 72 157-250 14-91 (92)
321 3me7_A Putative uncharacterize 97.0 0.0022 7.5E-08 57.6 9.3 97 153-252 28-160 (170)
322 2vim_A Thioredoxin, TRX; thior 97.0 0.0035 1.2E-07 50.4 9.7 96 262-363 4-103 (104)
323 3hz4_A Thioredoxin; NYSGXRC, P 97.0 0.00095 3.3E-08 57.8 6.6 68 293-363 43-110 (140)
324 2rem_A Disulfide oxidoreductas 97.0 0.00055 1.9E-08 62.6 5.2 42 152-193 24-65 (193)
325 1gh2_A Thioredoxin-like protei 97.0 0.0035 1.2E-07 51.1 9.6 96 262-363 6-105 (107)
326 2i1u_A Thioredoxin, TRX, MPT46 97.0 0.0014 5E-08 54.5 7.4 68 293-363 49-116 (121)
327 1dby_A Chloroplast thioredoxin 97.0 0.0022 7.6E-08 52.0 8.3 67 293-362 38-104 (107)
328 1ep7_A Thioredoxin CH1, H-type 97.0 0.0023 8E-08 52.4 8.4 98 262-363 7-109 (112)
329 1t00_A Thioredoxin, TRX; redox 97.0 0.0017 5.9E-08 53.3 7.6 68 293-363 42-109 (112)
330 2o8v_B Thioredoxin 1; disulfid 97.0 0.0012 3.9E-08 56.5 6.6 83 278-363 40-126 (128)
331 1q98_A Thiol peroxidase, TPX; 97.0 0.00062 2.1E-08 60.8 4.8 44 152-196 42-86 (165)
332 3p2a_A Thioredoxin 2, putative 97.0 0.002 7E-08 56.0 8.0 90 268-363 48-141 (148)
333 2l57_A Uncharacterized protein 96.9 0.0026 8.7E-08 53.6 8.3 72 293-364 45-116 (126)
334 2ppt_A Thioredoxin-2; thiredox 96.9 0.002 6.9E-08 57.0 7.8 81 280-363 67-150 (155)
335 3gv1_A Disulfide interchange p 96.9 0.00065 2.2E-08 60.1 4.4 83 151-252 12-137 (147)
336 1syr_A Thioredoxin; SGPP, stru 96.9 0.0038 1.3E-07 51.4 8.9 88 268-363 19-110 (112)
337 2l5l_A Thioredoxin; structural 96.9 0.0032 1.1E-07 54.0 8.8 69 293-364 57-125 (136)
338 2j23_A Thioredoxin; immune pro 96.9 0.0021 7.3E-08 54.0 7.2 95 262-363 20-119 (121)
339 1tp9_A Peroxiredoxin, PRX D (t 96.9 0.001 3.5E-08 59.3 5.4 56 152-207 34-93 (162)
340 1fb6_A Thioredoxin M; electron 96.9 0.0029 9.9E-08 51.0 7.7 67 293-362 37-103 (105)
341 3hz8_A Thiol:disulfide interch 96.8 0.00036 1.2E-08 64.4 1.9 44 151-194 22-65 (193)
342 3f3q_A Thioredoxin-1; His TAG, 96.8 0.0038 1.3E-07 51.3 8.1 88 268-363 17-108 (109)
343 3a2v_A Probable peroxiredoxin; 96.8 0.00075 2.6E-08 65.1 4.2 88 155-252 36-160 (249)
344 1v98_A Thioredoxin; oxidoreduc 96.8 0.0037 1.3E-07 53.8 8.1 82 279-363 52-136 (140)
345 3p7x_A Probable thiol peroxida 96.8 0.0012 4E-08 58.9 5.0 97 152-250 45-164 (166)
346 2xc2_A Thioredoxinn; oxidoredu 96.8 0.0058 2E-07 50.6 9.0 96 262-363 18-116 (117)
347 2wfc_A Peroxiredoxin 5, PRDX5; 96.7 0.001 3.4E-08 59.9 4.2 56 152-207 30-89 (167)
348 2av4_A Thioredoxin-like protei 96.7 0.0013 4.4E-08 58.7 4.7 99 262-363 26-137 (160)
349 1r26_A Thioredoxin; redox-acti 96.7 0.0053 1.8E-07 52.1 8.5 95 262-363 24-121 (125)
350 2vlu_A Thioredoxin, thioredoxi 96.7 0.0037 1.3E-07 52.2 7.3 66 293-363 53-118 (122)
351 2yzh_A Probable thiol peroxida 96.7 0.00065 2.2E-08 60.9 2.8 61 153-220 47-108 (171)
352 2dj0_A Thioredoxin-related tra 96.7 0.0019 6.6E-08 55.5 5.5 96 262-362 12-118 (137)
353 3nzn_A Glutaredoxin; structura 96.7 0.0018 6.2E-08 53.2 5.1 74 155-249 22-101 (103)
354 2l6c_A Thioredoxin; oxidoreduc 96.7 0.0052 1.8E-07 50.6 7.9 67 293-363 38-104 (110)
355 3d6i_A Monothiol glutaredoxin- 96.7 0.0063 2.2E-07 49.8 8.4 98 262-363 5-107 (112)
356 2khp_A Glutaredoxin; thioredox 96.7 0.00055 1.9E-08 54.7 1.7 57 157-227 8-65 (92)
357 1psq_A Probable thiol peroxida 96.6 0.00066 2.3E-08 60.4 1.8 55 152-207 41-96 (163)
358 2wz9_A Glutaredoxin-3; protein 96.6 0.011 3.6E-07 51.9 9.7 96 262-363 17-116 (153)
359 3rhb_A ATGRXC5, glutaredoxin-C 96.6 0.00037 1.3E-08 58.3 0.1 64 148-227 14-82 (113)
360 2pwj_A Mitochondrial peroxired 96.5 0.0012 4E-08 59.6 3.3 62 152-219 43-108 (171)
361 3zrd_A Thiol peroxidase; oxido 96.5 0.0016 5.5E-08 60.4 4.2 61 152-219 77-138 (200)
362 3iv4_A Putative oxidoreductase 96.5 0.004 1.4E-07 52.3 6.2 94 262-360 11-111 (112)
363 3l9v_A Putative thiol-disulfid 96.5 0.00041 1.4E-08 63.7 -0.0 43 153-195 14-59 (189)
364 2djj_A PDI, protein disulfide- 96.4 0.0033 1.1E-07 52.3 5.2 79 280-363 28-115 (121)
365 1wik_A Thioredoxin-like protei 96.4 0.0019 6.4E-08 53.8 3.6 68 144-227 6-79 (109)
366 1xfl_A Thioredoxin H1; AT3G510 96.4 0.0093 3.2E-07 50.3 8.1 97 262-363 21-122 (124)
367 2fwh_A Thiol:disulfide interch 96.4 0.014 4.9E-07 49.8 9.3 64 298-362 58-125 (134)
368 2pu9_C TRX-F, thioredoxin F-ty 96.4 0.02 6.7E-07 46.8 9.6 96 262-362 10-108 (111)
369 2lqo_A Putative glutaredoxin R 96.3 0.006 2.1E-07 49.3 6.0 75 157-252 6-82 (92)
370 3qmx_A Glutaredoxin A, glutare 96.3 0.0021 7.3E-08 52.6 3.3 61 153-227 14-76 (99)
371 2dj3_A Protein disulfide-isome 96.3 0.0036 1.2E-07 53.1 4.9 85 278-364 25-117 (133)
372 3dxb_A Thioredoxin N-terminall 96.3 0.0063 2.2E-07 57.0 6.9 81 280-363 33-116 (222)
373 3uma_A Hypothetical peroxiredo 96.3 0.0023 8E-08 58.6 3.6 55 153-207 56-114 (184)
374 1ti3_A Thioredoxin H, PTTRXH1; 96.2 0.01 3.5E-07 48.4 7.2 97 262-363 9-110 (113)
375 1zma_A Bacterocin transport ac 96.2 0.013 4.5E-07 48.6 7.7 79 280-361 32-117 (118)
376 3gix_A Thioredoxin-like protei 96.2 0.0088 3E-07 52.5 6.9 93 268-363 14-119 (149)
377 1faa_A Thioredoxin F; electron 96.2 0.026 8.9E-07 47.0 9.6 96 262-363 23-122 (124)
378 3feu_A Putative lipoprotein; a 96.2 0.0014 4.7E-08 60.1 1.5 40 153-194 22-61 (185)
379 2v2g_A Peroxiredoxin 6; oxidor 96.2 0.0064 2.2E-07 57.9 6.3 96 154-252 30-163 (233)
380 1fo5_A Thioredoxin; disulfide 96.2 0.012 4.1E-07 45.3 6.8 66 291-363 19-84 (85)
381 3mng_A Peroxiredoxin-5, mitoch 96.2 0.0038 1.3E-07 56.5 4.4 61 153-219 43-108 (173)
382 3msz_A Glutaredoxin 1; alpha-b 96.1 0.0027 9.4E-08 49.9 3.0 80 156-252 5-85 (89)
383 3emx_A Thioredoxin; structural 96.1 0.018 6.2E-07 49.2 8.4 89 268-363 26-124 (135)
384 3cxg_A Putative thioredoxin; m 96.1 0.021 7.3E-07 48.8 8.6 96 262-363 25-127 (133)
385 2ec4_A FAS-associated factor 1 96.1 0.016 5.3E-07 52.9 8.0 96 151-252 53-166 (178)
386 2kuc_A Putative disulphide-iso 96.0 0.01 3.4E-07 50.0 6.2 61 305-365 61-121 (130)
387 1nho_A Probable thioredoxin; b 96.0 0.013 4.3E-07 45.2 6.2 66 291-363 18-83 (85)
388 2yj7_A LPBCA thioredoxin; oxid 95.0 0.0011 3.8E-08 53.3 0.0 68 292-362 37-104 (106)
389 2vm1_A Thioredoxin, thioredoxi 96.0 0.024 8.3E-07 46.5 8.2 97 262-363 11-112 (118)
390 1wou_A Thioredoxin -related pr 95.8 0.019 6.5E-07 48.2 7.1 68 293-362 50-122 (123)
391 1qgv_A Spliceosomal protein U5 95.7 0.0094 3.2E-07 51.8 4.7 83 278-362 23-118 (142)
392 3fk8_A Disulphide isomerase; A 95.7 0.016 5.4E-07 49.1 6.0 69 294-362 49-130 (133)
393 1prx_A HORF6; peroxiredoxin, h 95.6 0.017 6E-07 54.4 6.7 95 155-252 34-167 (224)
394 2trc_P Phosducin, MEKA, PP33; 95.6 0.0088 3E-07 56.2 4.5 92 268-364 110-212 (217)
395 3d22_A TRXH4, thioredoxin H-ty 95.6 0.036 1.2E-06 47.2 8.0 67 293-364 65-131 (139)
396 3evi_A Phosducin-like protein 95.6 0.022 7.6E-07 48.0 6.5 78 280-364 25-113 (118)
397 2dbc_A PDCL2, unnamed protein 95.6 0.029 9.8E-07 48.1 7.3 90 268-364 20-120 (135)
398 1wmj_A Thioredoxin H-type; str 95.5 0.012 4.2E-07 49.3 4.4 97 262-363 19-120 (130)
399 2f51_A Thioredoxin; electron t 95.2 0.027 9.3E-07 46.9 5.8 70 293-366 42-114 (118)
400 1hyu_A AHPF, alkyl hydroperoxi 95.2 0.27 9.3E-06 52.0 14.9 175 153-363 18-198 (521)
401 3h8q_A Thioredoxin reductase 3 95.1 0.0045 1.6E-07 51.9 0.5 65 146-226 10-78 (114)
402 3ctg_A Glutaredoxin-2; reduced 95.0 0.0042 1.4E-07 53.5 0.0 71 144-227 28-103 (129)
403 1zzo_A RV1677; thioredoxin fol 94.9 0.08 2.7E-06 44.1 7.9 67 294-362 45-132 (136)
404 2lst_A Thioredoxin; structural 93.8 0.0049 1.7E-07 52.1 0.0 66 297-362 45-113 (130)
405 1xcc_A 1-Cys peroxiredoxin; un 94.8 0.026 8.8E-07 53.0 5.0 95 155-252 34-164 (220)
406 3erw_A Sporulation thiol-disul 94.8 0.067 2.3E-06 45.2 7.1 42 320-361 104-145 (145)
407 1lu4_A Soluble secreted antige 94.6 0.1 3.4E-06 43.6 7.9 67 294-362 44-133 (136)
408 2b5x_A YKUV protein, TRXY; thi 94.6 0.1 3.6E-06 44.1 8.0 43 320-362 100-142 (148)
409 1a0r_P Phosducin, MEKA, PP33; 94.6 0.043 1.5E-06 52.5 6.0 92 268-364 123-225 (245)
410 3dml_A Putative uncharacterize 94.6 0.038 1.3E-06 46.6 4.9 55 307-362 53-107 (116)
411 3qcp_A QSOX from trypanosoma b 94.5 0.011 3.8E-07 61.9 1.9 91 262-355 28-130 (470)
412 4hde_A SCO1/SENC family lipopr 94.1 0.22 7.6E-06 44.3 9.4 43 152-194 31-77 (170)
413 1ilo_A Conserved hypothetical 94.1 0.1 3.5E-06 39.2 6.1 70 281-360 3-76 (77)
414 3l9s_A Thiol:disulfide interch 94.1 0.014 4.7E-07 53.6 1.2 42 153-194 21-65 (191)
415 2f9s_A Thiol-disulfide oxidore 93.7 0.19 6.6E-06 43.0 7.9 43 320-362 93-135 (151)
416 2lja_A Putative thiol-disulfid 93.4 0.3 1E-05 41.6 8.7 42 321-362 99-140 (152)
417 4evm_A Thioredoxin family prot 92.8 0.41 1.4E-05 39.4 8.4 43 320-362 94-136 (138)
418 2l5o_A Putative thioredoxin; s 92.8 0.37 1.3E-05 41.1 8.3 43 320-362 96-138 (153)
419 3raz_A Thioredoxin-related pro 92.7 0.4 1.4E-05 41.0 8.4 43 320-362 93-137 (151)
420 2ju5_A Thioredoxin disulfide i 92.4 0.26 8.8E-06 42.9 6.8 42 320-362 106-149 (154)
421 3keb_A Probable thiol peroxida 92.1 0.1 3.5E-06 49.2 4.0 51 153-207 48-104 (224)
422 3l4n_A Monothiol glutaredoxin- 91.7 0.04 1.4E-06 47.2 0.6 68 145-226 6-78 (127)
423 4dvc_A Thiol:disulfide interch 91.3 0.086 2.9E-06 46.9 2.4 42 152-193 20-61 (184)
424 4f82_A Thioredoxin reductase; 91.1 0.15 5E-06 46.2 3.8 57 151-207 46-105 (176)
425 3fkf_A Thiol-disulfide oxidore 91.1 0.76 2.6E-05 38.6 8.3 40 320-362 104-143 (148)
426 3or5_A Thiol:disulfide interch 90.7 0.86 2.9E-05 39.2 8.4 37 327-363 113-149 (165)
427 3lor_A Thiol-disulfide isomera 90.4 1.2 4.1E-05 38.1 9.1 41 322-362 112-152 (160)
428 3gl3_A Putative thiol:disulfid 90.1 1 3.6E-05 38.1 8.3 43 321-363 96-140 (152)
429 3eyt_A Uncharacterized protein 89.9 1.2 4.1E-05 38.0 8.6 42 321-362 108-149 (158)
430 3ia1_A THIO-disulfide isomeras 89.9 0.36 1.2E-05 41.3 5.2 45 319-363 98-142 (154)
431 3c7m_A Thiol:disulfide interch 89.9 0.17 5.7E-06 45.6 3.0 43 152-194 16-59 (195)
432 3kp8_A Vkorc1/thioredoxin doma 89.9 0.16 5.6E-06 41.6 2.7 38 319-362 55-92 (106)
433 3hcz_A Possible thiol-disulfid 89.6 1.4 4.8E-05 36.9 8.6 77 278-356 31-137 (148)
434 1nm3_A Protein HI0572; hybrid, 89.4 0.19 6.6E-06 47.2 3.2 59 154-226 169-227 (241)
435 2ct6_A SH3 domain-binding glut 88.5 0.5 1.7E-05 39.0 4.8 57 156-226 9-80 (111)
436 2h30_A Thioredoxin, peptide me 88.4 1.2 4.1E-05 38.3 7.5 44 320-363 111-154 (164)
437 2dlx_A UBX domain-containing p 88.2 2.9 0.0001 36.5 9.9 56 306-362 77-133 (153)
438 3hdc_A Thioredoxin family prot 87.2 2.1 7.1E-05 36.7 8.3 46 320-365 105-152 (158)
439 1aba_A Glutaredoxin; electron 87.0 0.35 1.2E-05 37.7 2.7 57 157-226 2-73 (87)
440 2axo_A Hypothetical protein AT 87.0 1.4 4.9E-05 42.4 7.6 81 155-252 44-141 (270)
441 2fgx_A Putative thioredoxin; N 86.7 0.87 3E-05 37.5 5.1 59 294-360 48-106 (107)
442 2wci_A Glutaredoxin-4; redox-a 86.7 0.21 7.1E-06 43.2 1.3 65 147-226 29-98 (135)
443 3kcm_A Thioredoxin family prot 86.2 2.2 7.6E-05 36.1 7.8 42 321-362 97-140 (154)
444 2lrn_A Thiol:disulfide interch 86.0 2 6.8E-05 36.5 7.4 40 320-362 99-138 (152)
445 1kng_A Thiol:disulfide interch 85.2 3.9 0.00013 34.4 9.0 43 320-362 107-149 (156)
446 4eo3_A Bacterioferritin comigr 85.1 0.54 1.8E-05 46.6 3.7 93 153-252 24-137 (322)
447 3lwa_A Secreted thiol-disulfid 85.1 2.9 0.0001 36.7 8.3 36 327-362 143-178 (183)
448 3zyw_A Glutaredoxin-3; metal b 85.0 0.36 1.2E-05 40.0 1.9 62 149-226 12-79 (111)
449 3f9u_A Putative exported cytoc 84.6 1.9 6.4E-05 37.7 6.7 40 323-362 123-163 (172)
450 3tue_A Tryparedoxin peroxidase 83.6 1.7 5.8E-05 40.6 6.2 53 153-205 56-110 (219)
451 3ha9_A Uncharacterized thiored 83.5 2.8 9.7E-05 36.0 7.4 40 321-362 121-161 (165)
452 3sbc_A Peroxiredoxin TSA1; alp 83.2 0.84 2.9E-05 42.6 3.9 52 153-204 52-105 (216)
453 1xiy_A Peroxiredoxin, pfaop; a 82.8 1.1 3.8E-05 40.5 4.5 62 153-220 43-109 (182)
454 3gha_A Disulfide bond formatio 81.9 0.67 2.3E-05 42.5 2.7 44 151-194 27-73 (202)
455 1t1v_A SH3BGRL3, SH3 domain-bi 81.6 1.1 3.9E-05 35.3 3.6 58 157-226 4-68 (93)
456 2b1k_A Thiol:disulfide interch 81.5 3.3 0.00011 35.7 7.0 43 320-362 115-157 (168)
457 3ipz_A Monothiol glutaredoxin- 81.0 0.63 2.2E-05 38.2 1.9 63 148-226 13-81 (109)
458 3gx8_A Monothiol glutaredoxin- 80.7 1.2 4.2E-05 37.3 3.6 50 163-226 29-82 (121)
459 2wem_A Glutaredoxin-related pr 80.3 0.64 2.2E-05 39.0 1.7 50 163-226 33-84 (118)
460 3kh7_A Thiol:disulfide interch 80.2 6 0.0002 34.7 8.3 43 320-362 122-164 (176)
461 3fw2_A Thiol-disulfide oxidore 79.5 11 0.00039 31.5 9.7 39 321-362 107-145 (150)
462 2xhf_A Peroxiredoxin 5; oxidor 79.5 2.8 9.7E-05 37.4 5.9 55 153-207 42-99 (171)
463 2cvb_A Probable thiol-disulfid 78.5 5.8 0.0002 34.9 7.7 42 320-363 106-157 (188)
464 3f4s_A Alpha-DSBA1, putative u 78.2 1.3 4.4E-05 41.4 3.3 43 152-194 38-83 (226)
465 2pzi_A Probable serine/threoni 77.3 1.9 6.4E-05 47.0 4.7 49 33-86 625-675 (681)
466 3s9f_A Tryparedoxin; thioredox 76.6 4.2 0.00014 35.4 6.1 63 278-340 48-138 (165)
467 1ttz_A Conserved hypothetical 76.2 11 0.00036 29.4 7.7 47 309-363 29-75 (87)
468 2ywi_A Hypothetical conserved 75.8 4.5 0.00016 35.8 6.2 44 320-363 120-172 (196)
469 1o8x_A Tryparedoxin, TRYX, TXN 75.8 4.7 0.00016 33.8 6.1 45 294-338 48-116 (146)
470 1o73_A Tryparedoxin; electron 75.6 4.4 0.00015 33.7 5.8 19 320-338 98-116 (144)
471 3gn3_A Putative protein-disulf 75.4 1.3 4.3E-05 40.0 2.3 39 151-189 12-51 (182)
472 1sen_A Thioredoxin-like protei 75.4 1.1 3.8E-05 39.3 1.9 56 306-362 78-145 (164)
473 2hyx_A Protein DIPZ; thioredox 74.9 5.3 0.00018 39.9 7.0 43 320-362 154-196 (352)
474 3kp9_A Vkorc1/thioredoxin doma 74.1 1.1 3.6E-05 43.9 1.5 72 281-362 201-277 (291)
475 1jfu_A Thiol:disulfide interch 73.8 12 0.00042 32.6 8.5 69 294-362 80-177 (186)
476 2ggt_A SCO1 protein homolog, m 73.5 15 0.00051 31.0 8.9 42 321-362 102-158 (164)
477 1i5g_A Tryparedoxin II; electr 72.8 5.6 0.00019 33.2 5.7 45 294-338 48-116 (144)
478 3bci_A Disulfide bond protein 69.7 2.8 9.6E-05 37.2 3.2 41 152-192 10-53 (186)
479 2rli_A SCO2 protein homolog, m 69.2 11 0.00038 32.2 7.0 42 321-362 105-161 (171)
480 1wjk_A C330018D20RIK protein; 69.0 18 0.00061 28.6 7.7 53 305-363 42-94 (100)
481 3gmf_A Protein-disulfide isome 68.0 3 0.0001 38.3 3.1 42 151-192 13-57 (205)
482 2in3_A Hypothetical protein; D 66.7 5.3 0.00018 36.2 4.5 43 201-253 167-209 (216)
483 2lrt_A Uncharacterized protein 66.0 16 0.00054 30.9 7.3 34 322-355 105-138 (152)
484 3tdg_A DSBG, putative uncharac 65.2 1.8 6.1E-05 41.8 1.0 28 152-179 146-173 (273)
485 3ewl_A Uncharacterized conserv 61.5 11 0.00038 31.1 5.3 36 325-363 104-139 (142)
486 2e7p_A Glutaredoxin; thioredox 56.4 9.7 0.00033 30.4 3.9 41 320-363 63-106 (116)
487 2bmx_A Alkyl hydroperoxidase C 54.5 58 0.002 28.6 9.2 44 320-363 116-168 (195)
488 1z6n_A Hypothetical protein PA 54.3 12 0.00042 32.9 4.4 65 293-362 73-140 (167)
489 3eur_A Uncharacterized protein 54.1 26 0.0009 28.8 6.4 37 322-361 105-141 (142)
490 1zof_A Alkyl hydroperoxide-red 53.4 23 0.00078 31.4 6.2 43 320-362 107-158 (198)
491 1we0_A Alkyl hydroperoxide red 52.6 32 0.0011 30.0 7.0 43 320-362 102-154 (187)
492 3gv1_A Disulfide interchange p 51.3 17 0.00058 31.3 4.8 40 319-363 98-137 (147)
493 1u6t_A SH3 domain-binding glut 49.6 13 0.00046 31.1 3.7 61 157-226 2-72 (121)
494 3u5r_E Uncharacterized protein 49.6 64 0.0022 29.0 8.8 41 320-362 133-184 (218)
495 3bci_A Disulfide bond protein 49.4 13 0.00045 32.7 3.9 37 201-252 140-176 (186)
496 3cmi_A Peroxiredoxin HYR1; thi 49.2 40 0.0014 28.8 7.1 38 325-362 122-165 (171)
497 2k6v_A Putative cytochrome C o 48.9 16 0.00056 31.1 4.3 33 329-362 136-170 (172)
498 3drn_A Peroxiredoxin, bacterio 46.8 87 0.003 26.3 8.8 31 320-350 96-130 (161)
499 3ph9_A Anterior gradient prote 46.6 13 0.00046 32.1 3.4 53 308-361 79-138 (151)
500 3gha_A Disulfide bond formatio 44.9 19 0.00066 32.4 4.3 37 201-252 154-190 (202)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.1e-48 Score=438.66 Aligned_cols=384 Identities=19% Similarity=0.270 Sum_probs=263.6
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---ChHHHHHHHHhhhhHcCChhhhhcccccCCchhhhhhhhh
Q 010886 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKV 111 (498)
Q Consensus 35 ~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 111 (498)
...|||++|||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|+.+.....
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~--- 95 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ--- 95 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC---
Confidence 3689999999999999999999999999999999985 4677899999999999999999999999988765432
Q ss_pred hcccCCcccccccCCCCCCCCCCceeEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEE
Q 010886 112 REQYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMV 191 (498)
Q Consensus 112 ~~~~~~~~f~~~~~~~y~~~~~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~V 191 (498)
++++..+.|++..||+|.++. .|++||.++|++.++++++|+|+||||||+||+++.|+|+++|+.+++.+.+++|
T Consensus 96 ~~~~~~~~~~~~~fg~~~~~~----~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~v 171 (780)
T 3apo_A 96 GGQYESWSYYRYDFGIYDDDP----EIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAV 171 (780)
T ss_dssp --------CCSSSSSTTTTCT----TEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEE
T ss_pred CCCcccccccchhhcccCCCc----ceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEE
Confidence 455667777777788888752 3789999999999999999999999999999999999999999999988999999
Q ss_pred EcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccc---hhh
Q 010886 192 ELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKE---SMG 268 (498)
Q Consensus 192 dc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~---~~~ 268 (498)
||++++. +|++++ |+++||+++|++|.. ...|.|.++.++|++|+.+.+ .|....+++. +.+
T Consensus 172 d~~~~~~---l~~~~~------v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~--~~~~~~i~~~~~~~~l 236 (780)
T 3apo_A 172 NCGDDRM---LCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV--RSTVTELSTGNFVNAI 236 (780)
T ss_dssp ETTTCSS---CC--------------CEEEEECTTSC----CEECCSCSCHHHHHHHHHTTS--CCCEEECCHHHHHHHH
T ss_pred eCCCcHH---HHHHcC------CceeeeEEEEeCCcE----eeEecCCCCHHHHHHHHHHhc--hhhheeccchhhHHHH
Confidence 9997654 999998 999999999999975 358999999999999999982 3333335554 345
Q ss_pred hhhhhhcCCCcEEEEEEecCCC-CCc-HHHHHHHHhccccceEEEEE---------------------------------
Q 010886 269 KNFLAKTGPHKVKVIFFSKTGE-RAS-PFVRQISRNYWAYASFAFVL--------------------------------- 313 (498)
Q Consensus 269 ~~fl~~~~~~~~~vl~f~~~~~-~~~-~~~~~~A~~~~~~~~f~~v~--------------------------------- 313 (498)
+.+++. +.+.|++|.+..+ ++. ..++.++..+++.+.|+++.
T Consensus 237 ~~~~~~---~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~ 313 (780)
T 3apo_A 237 ETAFAA---GVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKS 313 (780)
T ss_dssp HHHHHH---TCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGG
T ss_pred Hhhhcc---CCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCccc
Confidence 666653 3466666665432 222 33344444444433333331
Q ss_pred -------------------------------------------------------------------------ecccc-c
Q 010886 314 -------------------------------------------------------------------------WREEE-S 319 (498)
Q Consensus 314 -------------------------------------------------------------------------~~~~~-~ 319 (498)
..||. .
T Consensus 314 ~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~ 393 (780)
T 3apo_A 314 SVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSA 393 (780)
T ss_dssp GSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGC
T ss_pred ceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCc
Confidence 11222 3
Q ss_pred HHHHHHcCCCCCCEEEEEeCCC-CceeeecCCCChhHHHHHHHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEE
Q 010886 320 SIWWNTFEVESAPAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYC 398 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~-~~~~~y~g~~~~~~L~~fi~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lc 398 (498)
..++++++++. |++++|++.+ +.+..|.|..+.++|.+|+..+..+.+.+++..++.+. . ++ .+.
T Consensus 394 ~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~-------~~----~vl 459 (780)
T 3apo_A 394 PGICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS--D-------KE----PWL 459 (780)
T ss_dssp HHHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT--C-------CS----CEE
T ss_pred hhhHhhccccC-ChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc--C-------CC----eEE
Confidence 56889999975 9999999876 55788999999999999999999999999999887542 1 11 244
Q ss_pred EEEeCCCchhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCCceEEEEEeCccCchhhhhhhhhhheeeecc
Q 010886 399 VILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDVSFIMLISLFYVDFFLH 478 (498)
Q Consensus 399 vi~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~ 478 (498)
|.+..+--.....+...+.++|+ +++++ +.|++||.+.... +++.|..
T Consensus 460 v~F~a~wC~~c~~~~p~~~~~a~----------------------~~~~~-v~~~~vd~~~~~~---------~~~~~~v 507 (780)
T 3apo_A 460 VDFFAPWSPPSRALLPELRKAST----------------------LLYGQ-LKVGTLDCTIHEG---------LCNMYNI 507 (780)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHH----------------------HTTTT-CEEEEEETTTCHH---------HHHHTTC
T ss_pred EEEECCCCHHHHHHhHHHHHHHH----------------------HhcCC-eEEEEEeCCCCHH---------HHHHcCC
Confidence 55555433345677777888888 77764 9999999998888 8888999
Q ss_pred CCceeeeeecc
Q 010886 479 SDLFVLWLLFP 489 (498)
Q Consensus 479 ~~~~~~~~~~~ 489 (498)
..+|.++++..
T Consensus 508 ~~~Pt~~~~~~ 518 (780)
T 3apo_A 508 QAYPTTVVFNQ 518 (780)
T ss_dssp CSSSEEEEEET
T ss_pred CcCCeEEEEcC
Confidence 99999998854
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.1e-38 Score=329.26 Aligned_cols=294 Identities=14% Similarity=0.162 Sum_probs=230.7
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCC---CCCh---HHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCCc
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLC---GQFS---GAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQ 210 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C---~~l~---p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~~ 210 (498)
|++||.+||++.|+++++|||+||||||||| ++++ |+|+++|+.+++. +.+++|||++++ .||++++
T Consensus 15 v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~---~l~~~~~--- 88 (367)
T 3us3_A 15 VINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDA---AVAKKLG--- 88 (367)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTH---HHHHHHT---
T ss_pred cEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccH---HHHHHcC---
Confidence 7899999999999999999999999999996 3333 7999999999875 899999999654 4999999
Q ss_pred ccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCC
Q 010886 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE 290 (498)
Q Consensus 211 ~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~ 290 (498)
|++|||+++|++|.. ..|.|.|++++|++|+.++ ..|.+..+++.+.++.|+... ...++|+||.+.+.
T Consensus 89 ---V~~~PTl~~f~~G~~-----~~y~G~~~~~~i~~~i~~~--~~~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~~~ 157 (367)
T 3us3_A 89 ---LTEEDSIYVFKEDEV-----IEYDGEFSADTLVEFLLDV--LEDPVELIEGERELQAFENIE-DEIKLIGYFKNKDS 157 (367)
T ss_dssp ---CCSTTEEEEEETTEE-----EECCSCCSHHHHHHHHHHH--HSCSEEECCSHHHHHHHHHCC-SSCEEEEECSCTTC
T ss_pred ---CCcCceEEEEECCcE-----EEeCCCCCHHHHHHHHHHh--cCCCcEEcCCHHHHHHHhccC-CCcEEEEEECCCCc
Confidence 999999999999864 3899999999999999998 356655566655578888621 23456666665443
Q ss_pred CCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-CChhHHHHHHHhcccCCCC
Q 010886 291 RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKLQELP 369 (498)
Q Consensus 291 ~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~-~~~~~L~~fi~~~~~~~vp 369 (498)
...+.+..+|..+++++.|+.+. +..++++|+++. |+|++|+++++.++.|.|. ++.++|.+||+.+.+|+++
T Consensus 158 ~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~ 231 (367)
T 3us3_A 158 EHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLR 231 (367)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEE
T ss_pred hHHHHHHHHHHhhcCCcEEEEEC-----CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCcccee
Confidence 34456777888898889999874 356899999975 9999999988888999995 8999999999999999999
Q ss_pred cccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCchhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCC-
Q 010886 370 QLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNK- 448 (498)
Q Consensus 370 ~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~- 448 (498)
+++.++..+..+... .+ .+|++++....++.+++.+.++++|+ +|+++
T Consensus 232 elt~~~~~~~~~~~~-----~~----~~~~~f~~~~~~~~~~~~~~l~~vA~----------------------~~~~~~ 280 (367)
T 3us3_A 232 KLKPESMYETWEDDM-----DG----IHIVAFAEEADPDGYEFLEILKSVAQ----------------------DNTDNP 280 (367)
T ss_dssp ECCGGGHHHHHHSCB-----TT----EEEEEECCTTSHHHHHHHHHHHHHHH----------------------HTTTCT
T ss_pred ecChhhHHHHHhhcc-----CC----cEEEEEEcCCChhHHHHHHHHHHHHH----------------------HcCCCC
Confidence 999999766433210 11 24544444344557788888888888 88875
Q ss_pred ceEEEEEeCccCchhhhhhhhhhheeeeccC-Cceeeeeeccc
Q 010886 449 RLTFAWLDGEAQDVSFIMLISLFYVDFFLHS-DLFVLWLLFPS 490 (498)
Q Consensus 449 ~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 490 (498)
++.|+|+|+..++.. + -++.++|... ++|.++|+|+.
T Consensus 281 ki~F~~id~~~~~~~----l-~~~~~~fgl~~~~P~~~i~~~~ 318 (367)
T 3us3_A 281 DLSIIWIDPDDFPLL----V-PYWEKTFDIDLSAPQIGVVNVT 318 (367)
T ss_dssp TCCEEEECGGGCTTT----H-HHHHHHHTCCTTSCEEEEEETT
T ss_pred ceEEEEECCccchhH----H-HHHHHhcCCCCCCCeEEEEecc
Confidence 699999999988870 0 0112335544 89999999986
No 3
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=2.2e-39 Score=308.59 Aligned_cols=197 Identities=26% Similarity=0.497 Sum_probs=171.8
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---ChHHHHHHHHhhhhHcCChhhhhcccccCCchhhhhhhhhhc
Q 010886 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVRE 113 (498)
Q Consensus 37 ~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~ 113 (498)
.|||++|||+++|+.++||+|||+++++||||+++ .+.++|++|++||++|+||.+|+.||++|+.+..... ++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cc
Confidence 58999999999999999999999999999999985 4678899999999999999999999999987654321 33
Q ss_pred ccCCcccccccCCCCCCCCCCceeEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEc
Q 010886 114 QYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (498)
Q Consensus 114 ~~~~~~f~~~~~~~y~~~~~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc 193 (498)
++..+.|++.+|++|..+ + .|..|+.++|+..+.++++++|.||||||++|+.+.|.|+++++.+++.+.++.|||
T Consensus 79 ~~~~~~~~~~~fg~~~~~-~---~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 79 QYESWSYYRYDFGIYDDD-P---EIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp CCCCHHHHHHSSSTTTTC-T---TSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred cccccccccccccccCCC-C---ceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 444455555567777664 2 267899999999998899999999999999999999999999999988899999999
Q ss_pred ccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 194 GDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 194 ~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
++++ .+|++++ |+++||+++|++|.. ...|.|.++.++|.+|+.+.+
T Consensus 155 ~~~~---~l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 155 GDDR---MLCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp TTCH---HHHHHTT------CCSSSEEEEECTTSC----CEECCSCCCHHHHHHHHHHHH
T ss_pred CccH---HHHHHcC------CCcCCeEEEEECCCc----eeEecCCCCHHHHHHHHHHhC
Confidence 9665 4999999 999999999988875 357899999999999999883
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2.1e-37 Score=317.46 Aligned_cols=288 Identities=13% Similarity=0.146 Sum_probs=230.9
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHH-------HHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCC
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGA-------WKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI 208 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~-------~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~ 208 (498)
.|++||.+||++.+.++++|+|+||||||+ |++++|+ |+++|+.+++. +.+++|||++++ .+|++++
T Consensus 12 ~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~---~l~~~~~- 86 (350)
T 1sji_A 12 RVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEA---KLAKKLG- 86 (350)
T ss_dssp CCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTH---HHHHHHT-
T ss_pred ccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCH---HHHHhcC-
Confidence 378999999999999999999999999999 9999999 99999999885 899999999664 4999999
Q ss_pred CcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhh-hcCCCcEEEEEEec
Q 010886 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLA-KTGPHKVKVIFFSK 287 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~-~~~~~~~~vl~f~~ 287 (498)
|++|||+++|++|.. ..|.|.|+.++|++|+.+.+ .|....+++.+.++.|++ +. ..++|.+|.+
T Consensus 87 -----v~~~Pt~~~~~~g~~-----~~~~G~~~~~~l~~~i~~~~--~~~~~~l~~~~~~~~~~~~~~--~~~vv~ff~~ 152 (350)
T 1sji_A 87 -----FDEEGSLYVLKGDRT-----IEFDGEFAADVLVEFLLDLI--EDPVEIINSKLEVQAFERIED--QIKLIGFFKS 152 (350)
T ss_dssp -----CCSTTEEEEEETTEE-----EEECSCCCHHHHHHHHHTTS--SCSEEECCSHHHHHHHHHCCS--SCEEEEECSC
T ss_pred -----CCccceEEEEECCcE-----EEecCCCCHHHHHHHHHHhc--CCcceeccchHHHHHHhccCC--CcEEEEEECC
Confidence 999999999999864 38999999999999999882 455555666555788875 33 2356666665
Q ss_pred CCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-CChhHHHHHHHhcccC
Q 010886 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKLQ 366 (498)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~-~~~~~L~~fi~~~~~~ 366 (498)
.+....+.+..+|..+++++.|+.+. .++++++++++ .|+|++|++.++.++.|+|+ ++.++|.+||+.+.+|
T Consensus 153 ~~~~~~~~~~~~A~~~~~~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 226 (350)
T 1sji_A 153 EESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRP 226 (350)
T ss_dssp TTSHHHHHHHHHHHHTTTTSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCC
T ss_pred CCcHHHHHHHHHHHhhccCcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCcc
Confidence 43333466777888888889998873 35699999998 99999999887888999997 8999999999999999
Q ss_pred CCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCC-chhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhc
Q 010886 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAF 445 (498)
Q Consensus 367 ~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~-~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~ 445 (498)
++++++.++..+ .|.. +.. .+|++++... ..+.+++++.++++|+ ++
T Consensus 227 ~v~elt~~~~~~-~~~~-----~~~----~~~~l~f~~~~~~~~~~~~~~~~~vA~----------------------~~ 274 (350)
T 1sji_A 227 TLRRLRPEDMFE-TWED-----DLN----GIHIVAFAERSDPDGYEFLEILKQVAR----------------------DN 274 (350)
T ss_dssp SEEECCTTTHHH-HHHS-----CSS----SEEEEEECCTTSHHHHHHHHHHHHHHH----------------------HG
T ss_pred chhhcChhhHHH-HhcC-----CCC----CcEEEEEEcCCCccHHHHHHHHHHHHH----------------------Hh
Confidence 999999999765 3431 010 2566666543 3345678888888888 77
Q ss_pred cC-CceEEEEEeCccCchhhhhhhhhhhe----eeeccC-Cceeeeeeccc
Q 010886 446 RN-KRLTFAWLDGEAQDVSFIMLISLFYV----DFFLHS-DLFVLWLLFPS 490 (498)
Q Consensus 446 ~~-~~~~f~wvd~~~q~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 490 (498)
++ +++.|+|+|+..++. ++ +.|... ++|.++|+|++
T Consensus 275 ~~~~~~~f~~id~~~~~~---------~~~~~~~~~gi~~~~P~~~i~~~~ 316 (350)
T 1sji_A 275 TDNPDLSIVWIDPDDFPL---------LVAYWEKTFKIDLFKPQIGVVNVT 316 (350)
T ss_dssp GGCSSCCEEEECGGGCHH---------HHHHHHHHCCSCTTSCEEEEEESS
T ss_pred CCCCceEEEEECchhhHH---------HHHHHHhhcCCCccCCcEEEEecc
Confidence 74 469999999998777 55 456444 78999999983
No 5
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=307.13 Aligned_cols=287 Identities=13% Similarity=0.144 Sum_probs=204.5
Q ss_pred eeEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhh------ccceEEEEEcccchhhhHHHHhCCCC
Q 010886 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE------GIANTGMVELGDIRLATHLAERKPIG 209 (498)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~------~~i~va~Vdc~~~~~~~~l~~~~~~~ 209 (498)
+.|++||.+||++.+.++++|+|+||||||+||++++|+|+++|+.++ +.+.+++|||++++ .+|++++
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~---~l~~~~~-- 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS---DIAQRYR-- 79 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH---HHHHHTT--
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH---HHHHhcC--
Confidence 457899999999999889999999999999999999999999999994 45899999999664 4999999
Q ss_pred cccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCC
Q 010886 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTG 289 (498)
Q Consensus 210 ~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~ 289 (498)
|++|||+++|++|... ...|.|.++.++|++|+.+.+ .|....+++.+.++. +.. ...++|.+|.+..
T Consensus 80 ----v~~~Pt~~~f~~G~~~---~~~~~G~~~~~~l~~~i~~~~--~~~v~~l~~~~~l~~-l~~--~~~~~v~ff~~~~ 147 (382)
T 2r2j_A 80 ----ISKYPTLKLFRNGMMM---KREYRGQRSVKALADYIRQQK--SDPIQEIRDLAEITT-LDR--SKRNIIGYFEQKD 147 (382)
T ss_dssp ----CCEESEEEEEETTEEE---EEECCSCCSHHHHHHHHHHHH--SCCCEEC---------------CCEEEEEESCSS
T ss_pred ----CCcCCEEEEEeCCcEe---eeeecCcchHHHHHHHHHHhc--cCCceecCCHHHHHH-hcC--CCCEEEEEECCCC
Confidence 9999999999998752 226999999999999999984 344444544433555 332 2335666666432
Q ss_pred CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC--CCceeeecCCC-ChhHHHHHHHhcccC
Q 010886 290 ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP--GVKPVVYYGSF-NNSRLSEVMEQNKLQ 366 (498)
Q Consensus 290 ~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~--~~~~~~y~g~~-~~~~L~~fi~~~~~~ 366 (498)
......+..+|..+++++.|+.+.. ++.+++++++.| + +|++. ...+..|.|++ +.++|.+||+.+.+|
T Consensus 148 ~~~~~~f~~~A~~~~~~~~F~~~~~------~~~~~~~v~~~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 219 (382)
T 2r2j_A 148 SDNYRVFERVANILHDDCAFLSAFG------DVSKPERYSGDN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVP 219 (382)
T ss_dssp SHHHHHHHHHHHHHTTTCEEEEEES------CC--------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSC
T ss_pred ChhHHHHHHHHHHhhccceEEEEeh------hhHHhhCCCCCc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccC
Confidence 2112356778888888888887752 256778998888 4 55554 34568899998 899999999999999
Q ss_pred CCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCc-hhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhc
Q 010886 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAF 445 (498)
Q Consensus 367 ~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~-~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~ 445 (498)
++++++.++..+..|.. . .+|++++.... +..+.+++.+.+++. ++
T Consensus 220 ~v~elt~~~~~~~~~~~------~-----~~~v~f~~~~~~~~~~~~~~~~~~~~~----------------------~~ 266 (382)
T 2r2j_A 220 LVREITFENGEELTEEG------L-----PFLILFHMKEDTESLEIFQNEVARQLI----------------------SE 266 (382)
T ss_dssp SSEECCHHHHHHHHTTC------C-----CEEEEEECTTCCHHHHHHHHHHHHHTG----------------------GG
T ss_pred ceEecChhhHHHHhcCC------C-----cEEEEEecCCchHHHHHHHHHHHHHHH----------------------Hh
Confidence 99999999987755542 1 37877775432 223444444444443 67
Q ss_pred cCCceEEEEEeCccCchhhhhhhhhhheeeeccC--Cceeeeeeccc
Q 010886 446 RNKRLTFAWLDGEAQDVSFIMLISLFYVDFFLHS--DLFVLWLLFPS 490 (498)
Q Consensus 446 ~~~~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 490 (498)
++ .+.|+|+|+..+++ ++.+|+-+ ++|.++|.++.
T Consensus 267 ~~-~i~f~~id~~~~~~---------~~~~~gl~~~~~P~i~i~~~~ 303 (382)
T 2r2j_A 267 KG-TINFLHADCDKFRH---------PLLHIQKTPADCPVIAIDSFR 303 (382)
T ss_dssp TT-TSEEEEEETTTTHH---------HHHHTTCCGGGCSEEEEECSS
T ss_pred CC-eeEEEEEchHHhHH---------HHHHcCCCccCCCEEEEEcch
Confidence 76 59999999999888 66666654 89999999874
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.9e-34 Score=307.36 Aligned_cols=291 Identities=15% Similarity=0.174 Sum_probs=228.0
Q ss_pred eEEEecCCCCcccccCC---CcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFHDS---KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~---~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|++||.+||++.+.++ ++|+|+||||||+||+++.|+|+++|+.+++.+.+++|||++++ .||++++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~l~~~~~------ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANT---NTCNKYG------ 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCH---HHHHHTT------
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCH---HHHHhcC------
Confidence 37899999999999777 99999999999999999999999999999998999999999654 4999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCCc
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~ 293 (498)
|+++||+++|++|.. ...|.|.++.++|++|+.+.+ .|....+++.+.++.|++.. ..++|.+|.+.+....
T Consensus 73 v~~~Ptl~~~~~g~~----~~~~~G~~~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~ 144 (481)
T 3f8u_A 73 VSGYPTLKIFRDGEE----AGAYDGPRTADGIVSHLKKQA--GPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAH 144 (481)
T ss_dssp CCEESEEEEEETTEE----EEECCSCSSHHHHHHHHHHHT--SCSEEEECSHHHHHHHTTSS--SCEEEEEESCTTCHHH
T ss_pred CCCCCEEEEEeCCce----eeeecCccCHHHHHHHHHhhc--ccCceecCCHHHHHHHHhcC--CcEEEEEECCCccchH
Confidence 999999999999954 358999999999999999982 45555566655678887643 2345556655444445
Q ss_pred HHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEe------CCCCceeeec-CCCChhHHHHHHHhcccC
Q 010886 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK------DPGVKPVVYY-GSFNNSRLSEVMEQNKLQ 366 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk------~~~~~~~~y~-g~~~~~~L~~fi~~~~~~ 366 (498)
..+..+|..+++++.|+.+. +..++++|+++. +.|++|+ +.+..++.|. |.++.+.|.+||+.+++|
T Consensus 145 ~~f~~~a~~~~~~~~F~~~~-----~~~~~~~~~v~~-~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTTSCEEEEC-----CHHHHHHHCSSS-EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCceEEEEC-----CHHHHHHhCCCC-CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 56677888898999999874 356899999976 4488898 4566778898 888999999999999999
Q ss_pred CCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCc----hhhHHHHHHHHHHHHhhcccccccccccCCCchHHH
Q 010886 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS----PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAA 442 (498)
Q Consensus 367 ~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~----~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a 442 (498)
++++++.+|..... .. .++++++..+. ...+.+++.++++|+
T Consensus 219 ~v~e~t~~n~~~~~-~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~--------------------- 264 (481)
T 3f8u_A 219 ICPHMTEDNKDLIQ-GK------------DLLIAYYDVDYEKNAKGSNYWRNRVMMVAK--------------------- 264 (481)
T ss_dssp TSCEECTTTHHHHT-TS------------SEEEEEECCCTTTCHHHHHHHHHHHHHHHH---------------------
T ss_pred CccccChhHHHHhc-CC------------CceEEEEecccccchhhHHHHHHHHHHHHH---------------------
Confidence 99999999976532 11 25555554321 123446777888888
Q ss_pred HhccCC--ceEEEEEeCccCchhhhhhhhhhheeeeccC----Cceeeeeecccceee
Q 010886 443 VAFRNK--RLTFAWLDGEAQDVSFIMLISLFYVDFFLHS----DLFVLWLLFPSMSMI 494 (498)
Q Consensus 443 ~~~~~~--~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 494 (498)
+|+++ .+.|+|+|+....+ .+.+|.-+ +.|.++|+++.+.+.
T Consensus 265 -~~~~k~~~i~F~~~D~~~~~~---------~l~~~gl~~~~~~~P~~~i~~~~~~ky 312 (481)
T 3f8u_A 265 -KFLDAGHKLNFAVASRKTFSH---------ELSDFGLESTAGEIPVVAIRTAKGEKF 312 (481)
T ss_dssp -HHHHTTCCCEEEEEETTTTHH---------HHGGGTCCCCTTCSCEEEEECSSSCEE
T ss_pred -HhcCCCceEEEEEEcHHHHHH---------HHHHcCCCcccCCCcEEEEEcCCCccc
Confidence 66654 39999999998777 45656554 799999998765443
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=9.2e-34 Score=304.01 Aligned_cols=281 Identities=12% Similarity=0.137 Sum_probs=221.0
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|.+||.+||++.++++++|+|+||||||+||+++.|+|+++|+.+++. +.+++|||++++ .+|++++ |+
T Consensus 15 ~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~ 85 (504)
T 2b5e_A 15 AVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ---DLCMEHN------IP 85 (504)
T ss_dssp SCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred CcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH---HHHHhcC------CC
Confidence 3789999999999999999999999999999999999999999999986 999999999664 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCCcHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPF 295 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~ 295 (498)
+|||+++|++|... ....|.|.++.++|++|+.+.+ .|....+++ ++.|++......++|++|.+........
T Consensus 86 ~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~l~~~~--~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~ 158 (504)
T 2b5e_A 86 GFPSLKIFKNSDVN--NSIDYEGPRTAEAIVQFMIKQS--QPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNAT 158 (504)
T ss_dssp SSSEEEEEETTCTT--CEEECCSCCSHHHHHHHHHHHT--SCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHH
T ss_pred cCCEEEEEeCCccc--cceeecCCCCHHHHHHHHHHhc--CCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHH
Confidence 99999999998731 1348999999999999999983 344444554 6778865321256777777543334566
Q ss_pred HHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-C---ChhHHHHHHHhcccCCCCcc
Q 010886 296 VRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-F---NNSRLSEVMEQNKLQELPQL 371 (498)
Q Consensus 296 ~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~-~---~~~~L~~fi~~~~~~~vp~l 371 (498)
+..+|..+++++.|+.+. +++++++++ +++|++.+ .++.|.|. + +.+.|.+||..+.+|+++++
T Consensus 159 f~~~A~~~~~~~~F~~~~-------~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~ 226 (504)
T 2b5e_A 159 FYSMANKHFNDYDFVSAE-------NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEI 226 (504)
T ss_dssp HHHHHHHTTTTCEEEEEE-------CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBC
T ss_pred HHHHHHHhhcCcEEEEEH-------HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccC
Confidence 777898998999998875 255667764 88888755 77889998 6 88999999999999999999
Q ss_pred cccchhhhccCCCCCcCCCCCCceeEEEEEeCCCchhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCCceE
Q 010886 372 RSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLT 451 (498)
Q Consensus 372 t~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 451 (498)
+..++.. .+.. +. .++++++ ...++.+++++.++++|+ +++++ +.
T Consensus 227 t~~~~~~-~~~~------~~----~~~~l~~-~~~~~~~~~~~~l~~~a~----------------------~~~~~-i~ 271 (504)
T 2b5e_A 227 DGSVFAQ-YVES------GL----PLGYLFY-NDEEELEEYKPLFTELAK----------------------KNRGL-MN 271 (504)
T ss_dssp CHHHHHH-HHHT------TS----CEEEEEE-SSHHHHHHHHHHHHHHHH----------------------HTTTT-CE
T ss_pred CHhHHHH-HhcC------CC----cEEEEEe-cCcccHHHHHHHHHHHHH----------------------hcCCe-eE
Confidence 9998754 2321 11 1333333 333344778888888888 78875 99
Q ss_pred EEEEeCccCchhhhhhhhhhheeeecc-CCceeeeeecc
Q 010886 452 FAWLDGEAQDVSFIMLISLFYVDFFLH-SDLFVLWLLFP 489 (498)
Q Consensus 452 f~wvd~~~q~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 489 (498)
|+|+|+..+.+ +++.|.. .++|.++|+++
T Consensus 272 F~~id~~~~~~---------~~~~~gl~~~~P~v~i~~~ 301 (504)
T 2b5e_A 272 FVSIDARKFGR---------HAGNLNMKEQFPLFAIHDM 301 (504)
T ss_dssp EEEEEHHHHTT---------HHHHTTCCSCSSEEEEEET
T ss_pred EEEEehhhhHH---------HHHHcCCcccCCEEEEEeC
Confidence 99999998887 5565554 58999999987
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4e-29 Score=250.69 Aligned_cols=228 Identities=17% Similarity=0.255 Sum_probs=182.5
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|++||.++|++.+ +++++++|+||||||++|+++.|.|+++|+.+++.+.++.|||+... ...+|++++ |+
T Consensus 18 ~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~------I~ 90 (298)
T 3ed3_A 18 HISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYD------VN 90 (298)
T ss_dssp TCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTT------CC
T ss_pred CeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCC------CC
Confidence 47999999999999 67889999999999999999999999999999988999999998432 245999999 99
Q ss_pred eeeEEEEeCCCCcC-------------CCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEE
Q 010886 216 GLPSLVAFPPGCKS-------------SDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKV 282 (498)
Q Consensus 216 ~~PTl~~f~~g~~~-------------~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~v 282 (498)
++||+++|.+|... ......|.|.|++++|++|+.+.+ .+....+++.+.++.|++.. +.+.|
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~--~~~v~~i~~~~~l~~~l~~~--~~~~v 166 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI--RSYVKKFVRIDTLGSLLRKS--PKLSV 166 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC--CCCEEECSCGGGHHHHHTSC--SSEEE
T ss_pred ccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc--ccccEEcCCHHHHHHHHhcC--CceEE
Confidence 99999999998620 012458999999999999999882 23444465555578888743 45888
Q ss_pred EEEecCCCCCcHHHHHHHHhccccceEEEEEecccccHHHH--HHcC-----C-------------CCCCEEEEEeCCCC
Q 010886 283 IFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWW--NTFE-----V-------------ESAPAIVFLKDPGV 342 (498)
Q Consensus 283 l~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~--~~f~-----V-------------~~~Pti~lfk~~~~ 342 (498)
++|+++. ...+.++.+|..+++.+.|+.+...+. ..+. ++|+ | ...|+|++|++.++
T Consensus 167 i~fs~~~-~~~~~f~~~A~~~~~~~~F~~v~~~~~--a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~ 243 (298)
T 3ed3_A 167 VLFSKQD-KISPVYKSIALDWLGKFDFYSISNKKL--KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKD 243 (298)
T ss_dssp EEEESSS-SCCHHHHHHHHHTBTTEEEEEEEGGGC--CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTT
T ss_pred EEEcCCC-cchHHHHHHHHHhhcCcEEEEEcchHh--hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCC
Confidence 8887553 457889999999999999999874321 1111 2222 2 56899999999888
Q ss_pred ceeeecC-CCChhHHHHHHH--hcccCCCCcccccchhh
Q 010886 343 KPVVYYG-SFNNSRLSEVME--QNKLQELPQLRSVTSME 378 (498)
Q Consensus 343 ~~~~y~g-~~~~~~L~~fi~--~~~~~~vp~lt~~~~~~ 378 (498)
+++.|.| .++.++|.+||. .++.|++++++..+.+.
T Consensus 244 ~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 244 KFWEYEGNSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp EEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred ceEEeccccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 9999995 689999999999 88999999999877443
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.94 E-value=6.6e-26 Score=255.30 Aligned_cols=288 Identities=15% Similarity=0.140 Sum_probs=224.1
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.++|.++|++. .+++++|.||||||++|+.+.|.|+++|+.+++.+.|+.|||++++ .+|++++ |+++
T Consensus 442 v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~~~~~~~------v~~~ 510 (780)
T 3apo_A 442 VTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHE---GLCNMYN------IQAY 510 (780)
T ss_dssp EEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred CEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHHcC------CCcC
Confidence 789999999987 7899999999999999999999999999999988999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcC-CCcEEEEEEecCC---CCCc
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTG-PHKVKVIFFSKTG---ERAS 293 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~-~~~~~vl~f~~~~---~~~~ 293 (498)
||+++|.+|.. ..|.|.++.++|.+|+.+.+ .|.+..++..+ +++++.... +..++|.|+.+-+ +...
T Consensus 511 Pt~~~~~~g~~-----~~~~g~~~~~~l~~fi~~~~--~~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~ 582 (780)
T 3apo_A 511 PTTVVFNQSSI-----HEYEGHHSAEQILEFIEDLR--NPSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHPSQVLM 582 (780)
T ss_dssp SEEEEEETTEE-----EEECSCSCHHHHHHHHHHHH--SCSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHHHHHHH
T ss_pred CeEEEEcCCce-----eeecCcccHHHHHHHHHhhc--ccceeecCccc-HHHHhhccCCCCeEEEEEECCCCHHHHHhh
Confidence 99999988754 37899999999999999984 35555565543 666665432 2335666666532 2245
Q ss_pred HHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCC---ceeeecC-CCChhHHHHHHHhcccCCCC
Q 010886 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYG-SFNNSRLSEVMEQNKLQELP 369 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~---~~~~y~g-~~~~~~L~~fi~~~~~~~vp 369 (498)
+.+..+|..+++.+.|+.+... ....++++++|+++|+|++|+.++. .+..|.| .++.++|.+||..+..+.+.
T Consensus 583 p~~~~lA~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~ 660 (780)
T 3apo_A 583 PEWKRMARTLTGLINVGSVDCG--QYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASI 660 (780)
T ss_dssp HHHHHHHHHHTTTSEEEEEETT--TTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSE
T ss_pred HHHHHHHHHhhCCeEEEEEECc--chHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccc
Confidence 7778899888888888887532 2367899999999999999987654 4678999 88999999999998888888
Q ss_pred cccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCchhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCCc
Q 010886 370 QLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKR 449 (498)
Q Consensus 370 ~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 449 (498)
+++..++.+..+.. ++ .+.|.+..+--.....+...+.++++ ++++ .
T Consensus 661 ~l~~~~~~~~~~~~------~~----~v~v~F~a~wC~~C~~~~p~~~~la~----------------------~~~~-~ 707 (780)
T 3apo_A 661 DLTPQTFNEKVLQG------KT----HWVVDFYAPWSGPSQNFAPEFELLAR----------------------MIKG-K 707 (780)
T ss_dssp EECHHHHHHHTTTC------SS----CEEEEEECTTCHHHHHHHHHHHHHHH----------------------HHTT-T
T ss_pred cCCHHHHHHHHhcC------CC----eEEEEEECCCCHHHHHHHHHHHHHHH----------------------HhcC-C
Confidence 88887775544432 12 13333333333345566777777777 6766 4
Q ss_pred eEEEEEeCccCchhhhhhhhhhheeeeccCCceeeeeec
Q 010886 450 LTFAWLDGEAQDVSFIMLISLFYVDFFLHSDLFVLWLLF 488 (498)
Q Consensus 450 ~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (498)
+.|++||...+.. ++.-|....+|.++++.
T Consensus 708 ~~~~~vd~~~~~~---------~~~~~~v~~~Pt~~~~~ 737 (780)
T 3apo_A 708 VRAGKVDCQAYPQ---------TCQKAGIKAYPSVKLYQ 737 (780)
T ss_dssp CEEEEEETTTCHH---------HHHHTTCCSSSEEEEEE
T ss_pred ceEEEEECCCCHH---------HHHhcCCCcCCEEEEEc
Confidence 9999999999888 77778889999998874
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.93 E-value=1.5e-25 Score=215.89 Aligned_cols=208 Identities=16% Similarity=0.262 Sum_probs=163.3
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|.+||.++|++.+.++++++|+|||+||++|+++.|.|+++++.+++. +.++.|||++++ .+|++++
T Consensus 16 ~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------ 86 (241)
T 3idv_A 16 GVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS---VLASRFD------ 86 (241)
T ss_dssp TEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTT------
T ss_pred CcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH---HHHHhcC------
Confidence 3889999999999999999999999999999999999999999999876 899999999665 4999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcC----Ccccc-cccchhhhhhhhhcCCCcEEEE-EEec
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PRIFY-YTKESMGKNFLAKTGPHKVKVI-FFSK 287 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~----P~~~~-it~~~~~~~fl~~~~~~~~~vl-~f~~ 287 (498)
|+++||+++|.+|... .|.|.++.++|.+|+.+..... |.... ++..+ ++.++... +++++ |+++
T Consensus 87 v~~~Pt~~~~~~g~~~-----~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~v~f~a~ 157 (241)
T 3idv_A 87 VSGYPTIKILKKGQAV-----DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVNDA---DIILVEFYAP 157 (241)
T ss_dssp CCSSSEEEEEETTEEE-----ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHHC---SEEEEEEECT
T ss_pred CCcCCEEEEEcCCCcc-----cccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhccC---CeEEEEEECC
Confidence 9999999999988753 7999999999999999874321 11222 33333 56666543 25555 4443
Q ss_pred C---CCCCcHHHHHHHHhcccc---ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHH
Q 010886 288 T---GERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (498)
Q Consensus 288 ~---~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~ 361 (498)
- |....+.+..++..+.+. +.|+.+... +..+++++|+|.++||+++|+++ +.+.|.|.++.+.|.+||+
T Consensus 158 wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~ 233 (241)
T 3idv_A 158 WCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT--AETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYMI 233 (241)
T ss_dssp TCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT--TCHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHHH
T ss_pred CCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC--CCHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHHH
Confidence 2 233457777788777544 677777533 24789999999999999999864 4567999999999999999
Q ss_pred hcccC
Q 010886 362 QNKLQ 366 (498)
Q Consensus 362 ~~~~~ 366 (498)
++.-|
T Consensus 234 ~~~~~ 238 (241)
T 3idv_A 234 EQSGA 238 (241)
T ss_dssp HHTTC
T ss_pred hhhCC
Confidence 86543
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.88 E-value=5.7e-22 Score=192.40 Aligned_cols=208 Identities=12% Similarity=0.172 Sum_probs=148.0
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc---cceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
|.+||.++|++.+ +++++|+|+|||+||++|+++.|.|+++|+.+++ .+.+++|||+.+ ....+|++++
T Consensus 14 v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~------ 86 (244)
T 3q6o_A 14 LTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFN------ 86 (244)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTT------
T ss_pred ceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcC------
Confidence 7899999999987 6679999999999999999999999999999987 689999999533 2345999999
Q ss_pred eeeeeEEEEeCCCCcCC-CCcccccCCCCHHHHHHHHHHHhhcCC----c----ccccccchhhhhhhhhcCCCcEEEEE
Q 010886 214 RRGLPSLVAFPPGCKSS-DCMTRFEGELSVDAVTDWFATAILKLP----R----IFYYTKESMGKNFLAKTGPHKVKVIF 284 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~-~~~~~Y~G~r~~~~Iv~fv~k~~~~~P----~----~~~it~~~~~~~fl~~~~~~~~~vl~ 284 (498)
|+++||+++|.+|.... .....+.| ++.+.|.+|+.+.+.... . ...++. +.++.|+... .....+++
T Consensus 87 v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~-~~l~~~~~~~-~~~~~al~ 163 (244)
T 3q6o_A 87 IPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXL-EEIDGFFARN-NEEYLALI 163 (244)
T ss_dssp CCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCH-HHHHTHHHHC-CCSEEEEE
T ss_pred CCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccH-HHHHHHhhcC-CCceEEEE
Confidence 99999999999875420 01124455 799999999988754321 1 112232 3367777653 45577777
Q ss_pred EecCCCCCcHHHHHHHHhcccc--ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-CChhHHHHHHH
Q 010886 285 FSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVME 361 (498)
Q Consensus 285 f~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~-~~~~~L~~fi~ 361 (498)
|.+.. ....+.++..+... +.++.+. + ....++++|||+++|+++++..++ +...+... -+.+.+..+++
T Consensus 164 f~~~~---~~~~~~~~~d~~~~~~i~v~~~~--~-~~~~l~~~f~v~~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 164 FEXGG---SYLAREVALDLSQHKGVAVRRVL--N-TEANVVRKFGVTDFPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp EECTT---CCHHHHHHHHTTTCTTEEEEEEE--T-TCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSSSHHHHHHHHH
T ss_pred EEECC---cchHHHHHHHhccCCceEEEEEe--C-chHHHHHHcCCCCCCeEEEEeCCC-CeEeeccccccHHHHHHHHH
Confidence 77543 34556665555533 4444443 2 236799999999999999998754 44444433 34566666666
Q ss_pred h
Q 010886 362 Q 362 (498)
Q Consensus 362 ~ 362 (498)
.
T Consensus 237 ~ 237 (244)
T 3q6o_A 237 R 237 (244)
T ss_dssp T
T ss_pred h
Confidence 4
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.85 E-value=3.6e-20 Score=198.64 Aligned_cols=209 Identities=14% Similarity=0.170 Sum_probs=149.6
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc---cceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
|.+|+.++|++.+ +++++++|+|||+||++|+++.|.|+++|+++++ .+.|++|||+++. ..++|++++
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~~~l~~~~~------ 86 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-NSAVCREFN------ 86 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-GHHHHHHTT------
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-cHHHHHHcC------
Confidence 7899999999977 6779999999999999999999999999999988 6899999997532 355999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCC--------cccccccchhhhhhhhhcCCCcEEEEEE
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP--------RIFYYTKESMGKNFLAKTGPHKVKVIFF 285 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P--------~~~~it~~~~~~~fl~~~~~~~~~vl~f 285 (498)
|+++||+++|.+|...-.....+.|+++.+.|.+++.+.+.... ....++.. .++.|+.+. ...+++++|
T Consensus 87 V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~-~l~~~l~~~-~~~~vallF 164 (519)
T 3t58_A 87 IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLN-DIDGFFTRN-KADYLALVF 164 (519)
T ss_dssp CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHH-HHTTGGGSC-CCSEEEEEE
T ss_pred CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHH-HHHHHhccC-CCCeEEEEe
Confidence 99999999999764411112356788999999999998743211 11123333 367777653 456778888
Q ss_pred ecCCCCCcHHHHHHHHhcccc--ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHHHHHHHh
Q 010886 286 SKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQ 362 (498)
Q Consensus 286 ~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~-~~~~L~~fi~~ 362 (498)
.+.. ....+.++..+... +.++.+. + +...++++|||+++|+++++..++.. ..+.... ..+.+..++++
T Consensus 165 ~~~~---s~~~~~~~ldl~~~~~v~v~~v~--~-~~~~l~~kfgV~~~Pslvl~~~nGk~-~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 165 ERED---SYLGREVTLDLSQYHAVAVRRVL--N-TESDLVNKFGVTDFPSCYLLLRNGSV-SRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp ECTT---CCHHHHHHHHTTTCTTEEEEEEE--T-TCHHHHHHHTCCCSSEEEEEETTSCE-EECCCSSCSHHHHHHHHTT
T ss_pred cCCc---hHHHHHHHHHhhccCCeeEEEec--C-chHHHHHHcCCCCCCeEEEEeCCCce-eecccccccHHHHHHHHHH
Confidence 7543 34556666666543 4444443 2 24679999999999999999876532 2222222 23445666654
No 13
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=1.4e-20 Score=163.64 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=92.7
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhh-----ccceEEEEEcccchhhhHHHHhCCCCc
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLAERKPIGQ 210 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-----~~i~va~Vdc~~~~~~~~l~~~~~~~~ 210 (498)
.|.+|+.++|++.+ +++++++|.||||||++|+++.|.|+++|+.+. +.+.+++|||++++ ++|++++
T Consensus 16 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~--- 89 (127)
T 3h79_A 16 RVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP---DVIERMR--- 89 (127)
T ss_dssp CCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH---HHHHHTT---
T ss_pred ceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH---hHHHhcC---
Confidence 37899999999988 569999999999999999999999999999874 45899999999665 4999999
Q ss_pred ccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|.+|+.. .+..|.|.++.++|.+|+.+.
T Consensus 90 ---v~~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 ---VSGFPTMRYYTRIDKQ--EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ---CCSSSEEEEECSSCSS--SCEECCSCCCHHHHHHHHHHH
T ss_pred ---CccCCEEEEEeCCCCC--CceEecCCccHHHHHHHHHhc
Confidence 9999999999998652 235899999999999999864
No 14
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.82 E-value=2.1e-19 Score=172.08 Aligned_cols=190 Identities=10% Similarity=0.042 Sum_probs=136.1
Q ss_pred cCCCcEEEEEe-----cCCCCCCCCChHHHHHHHHHh--hccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEe
Q 010886 151 HDSKPWLIQVY-----SDGSYLCGQFSGAWKTIAALL--EGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF 223 (498)
Q Consensus 151 ~~~~~~lV~FY-----apwC~~C~~l~p~~~~~A~~l--~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f 223 (498)
+...+++|.|| +|||+||+++.|+|+++|+.+ .+.+.+++|||++++ ++|++|+ |+++||+++|
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~~Ptl~~~ 88 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK---EETEKYG------VDRVPTIVIE 88 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH---HHHHHTT------CCBSSEEEEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH---HHHHHcC------CCcCcEEEEE
Confidence 34566777777 899999999999999999998 667999999999665 4999999 9999999999
Q ss_pred CCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEE-EEecCCC-C--CcHHHHHH
Q 010886 224 PPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTGE-R--ASPFVRQI 299 (498)
Q Consensus 224 ~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl-~f~~~~~-~--~~~~~~~~ 299 (498)
++|.. ...|.|.++.+++.+|+.+.+........++... ++..... ...+.++ |+++.|. | ..+.+..+
T Consensus 89 ~~~~~----~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~~~~~~~~ 161 (229)
T 2ywm_A 89 GDKDY----GIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKT-LELLQVV--DIPIEIWVFVTTSCGYCPSAAVMAWDF 161 (229)
T ss_dssp SSSCC----CEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHH-HHHHTTC--CSCEEEEEEECTTCTTHHHHHHHHHHH
T ss_pred CCCcc----cceecCCccHHHHHHHHHHHHhccCCccCCCHHH-HHHHHhc--CCCeEEEEEECCCCcchHHHHHHHHHH
Confidence 86543 4689999999999999988632112222233322 4444321 2234344 5554331 1 23556667
Q ss_pred HHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 300 SRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 300 A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+..+ +.+.++.+... ..++++++|+|.++|++++ ++ . ...|.|..+.+.|.+||++.
T Consensus 162 ~~~~-~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~--~G-~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 162 ALAN-DYITSKVIDAS--ENQDLAEQFQVVGVPKIVI--NK-G-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHHC-TTEEEEEEEGG--GCHHHHHHTTCCSSSEEEE--GG-G-TEEEESCCCHHHHHHHHHHH
T ss_pred HHHC-CCeEEEEEECC--CCHHHHHHcCCcccCEEEE--CC-E-EEEeeCCCCHHHHHHHHHHH
Confidence 7666 45666666532 2477999999999999988 33 2 44589999999999999764
No 15
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.81 E-value=1e-19 Score=173.75 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=138.9
Q ss_pred CCCcEEEEEecC-CCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCC
Q 010886 152 DSKPWLIQVYSD-GSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (498)
Q Consensus 152 ~~~~~lV~FYap-wC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~ 230 (498)
++.+++|.||+| ||++|+++.|.|+++|+. .+.+.+++|||++. ...++|++++ |+++||+++|++|...
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~~~~~g~~~- 91 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTP-EGKELAKRYR------IDRAPATTITQDGKDF- 91 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSH-HHHHHHHHTT------CCSSSEEEEEETTBCC-
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCc-ccHHHHHHcC------CCcCceEEEEcCCcee-
Confidence 456788999999 999999999999999864 56789999999961 0345999999 9999999999888642
Q ss_pred CCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcE-EEEEEecCCC---CCcHHHHHHHHhcc--
Q 010886 231 DCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKV-KVIFFSKTGE---RASPFVRQISRNYW-- 304 (498)
Q Consensus 231 ~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~-~vl~f~~~~~---~~~~~~~~~A~~~~-- 304 (498)
...|.|.++.+.+.+|+...+........++... ++.... ....+ +|.|+++-|. ...+.+..++..+.
T Consensus 92 --~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~-~~~~~~--~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~ 166 (226)
T 1a8l_A 92 --GVRYFGLPAGHEFAAFLEDIVDVSREETNLMDET-KQAIRN--IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA 166 (226)
T ss_dssp --SEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHH-HHHHTT--CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT
T ss_pred --eEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHH-HHHHHh--cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc
Confidence 3589999999999999987532111111122222 333322 12335 5556654331 13466666777665
Q ss_pred --ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 305 --AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 305 --~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+.+.++.+... +...++++|+|.+.||+++|+++ .....|.|..+.+.|.+||++.
T Consensus 167 ~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 167 GKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp TCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 35666666532 24779999999999999999854 3445789999999999999863
No 16
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.80 E-value=2.7e-19 Score=183.13 Aligned_cols=210 Identities=14% Similarity=0.165 Sum_probs=153.0
Q ss_pred EEEecCCCCcccccC-CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~-~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.++|.+||...+.+ .+.|+|.||++||++|+++.|.|+++|+.+++.+.++.|||++.. ...+|+.+| |++
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~-~~~~~~~fg------i~~ 191 (361)
T 3uem_A 119 VIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTD-NQRILEFFG------LKK 191 (361)
T ss_dssp EEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGG-GHHHHHHTT------CCT
T ss_pred ceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHH-HHHHHHHcC------CCc
Confidence 788999999988744 567899999999999999999999999999999999999999321 244999999 877
Q ss_pred --eeEEEEeCCCCcCCCCccccc---CCCCHHHHHHHHHHHhhcC----------Cc------ccccccchhhhhhhhhc
Q 010886 217 --LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWFATAILKL----------PR------IFYYTKESMGKNFLAKT 275 (498)
Q Consensus 217 --~PTl~~f~~g~~~~~~~~~Y~---G~r~~~~Iv~fv~k~~~~~----------P~------~~~it~~~~~~~fl~~~ 275 (498)
+||+++|..|.. ...|. |.++.++|.+|+.+.+.+. |. +..++..+ ++..+..
T Consensus 192 ~~~P~~~~~~~~~~----~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~-f~~~~~~- 265 (361)
T 3uem_A 192 EECPAVRLITLEEE----MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN-FEDVAFD- 265 (361)
T ss_dssp TTCSEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT-HHHHHTC-
T ss_pred cCCccEEEEEcCCc----ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc-hhhhccc-
Confidence 999999998543 23665 8999999999999864321 11 11133333 3444421
Q ss_pred CCCcEEEEEEecCC---CCCcHHHHHHHHhcccc--ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC-CCceeeecC
Q 010886 276 GPHKVKVIFFSKTG---ERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYG 349 (498)
Q Consensus 276 ~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~-~~~~~~y~g 349 (498)
....++|.|+++-| ....|.+..++..+.+. +.++.+. ++.. .+++|+|.++||+++|+++ +..+..|.|
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd---~~~~-~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G 341 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD---STAN-EVEAVKVHSFPTLKFFPASADRTVIDYNG 341 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEE---TTTC-BCSSCCCCSSSEEEEECSSSSCCCEECCS
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEE---CCcc-chhhcCCcccCeEEEEECCCCcceeEecC
Confidence 12234555555432 22457777888888765 4555554 3222 2678999999999999765 456788999
Q ss_pred CCChhHHHHHHHhcc
Q 010886 350 SFNNSRLSEVMEQNK 364 (498)
Q Consensus 350 ~~~~~~L~~fi~~~~ 364 (498)
.++.+.|.+||+++.
T Consensus 342 ~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 342 ERTLDGFKKFLESGG 356 (361)
T ss_dssp CSSHHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHhcC
Confidence 999999999999864
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.77 E-value=2.2e-19 Score=141.72 Aligned_cols=67 Identities=33% Similarity=0.541 Sum_probs=63.0
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccccCCc
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~ 102 (498)
..|||++|||+++++.++||+|||+++++||||+++++.++|++|++||++|+||.+|..||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 5699999999999999999999999999999999988889999999999999999999999999963
No 18
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.8e-18 Score=150.42 Aligned_cols=108 Identities=19% Similarity=0.369 Sum_probs=95.5
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+|+.++|+..+ +++++++|.||+|||++|+++.|.|+++++.+++.+.++.|||++++ .+|++++ |++
T Consensus 19 v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------v~~ 89 (130)
T 2dml_A 19 VIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ---SLGGQYG------VQG 89 (130)
T ss_dssp SEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHHT------CCS
T ss_pred cEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH---HHHHHcC------CCc
Confidence 7889999999955 77899999999999999999999999999999988999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCC
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P 257 (498)
+||+++|.+|... ...|.|.++.++|.+|+.+.+...|
T Consensus 90 ~Pt~~~~~~~~~~---~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 90 FPTIKIFGANKNK---PEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp SSEEEEESSCTTS---CEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred cCEEEEEeCCCCe---EEEeecCCCHHHHHHHHHHHHhcCC
Confidence 9999999988652 3578999999999999998754433
No 19
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.76 E-value=2.7e-19 Score=151.33 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=84.3
Q ss_pred EEecC-CCCcccc--cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 139 NVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 139 ~~Lt~-~nF~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.++++ ++|++.+ .++++++|.||||||++|+.+.|.|+++|+.+.+ +.+++||+++++. ||++|+ |+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~~---l~~~~~------V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECED---IAQDNQ------IA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCHH---HHHHTT------CC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCHH---HHHHcC------CC
Confidence 44544 6799888 3478999999999999999999999999998865 6799999996654 999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ...+.| ++.++|.+|+.++
T Consensus 73 ~~PT~~~~~~G~~----v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFMKNGQK----LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred eecEEEEEECCEE----EEEEeC-cCHHHHHHHHHhc
Confidence 9999999999976 346677 6899999999875
No 20
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.75 E-value=5.8e-19 Score=140.76 Aligned_cols=70 Identities=26% Similarity=0.458 Sum_probs=65.1
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
..|||++|||+++++.++||+|||++++++|||+++ .+.++|+.|++||++|+||.+|..||++|.++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 469999999999999999999999999999999975 5788999999999999999999999999987643
No 21
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=7.8e-19 Score=140.37 Aligned_cols=70 Identities=27% Similarity=0.487 Sum_probs=65.1
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhcccccCCch
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~ 103 (498)
....|||++|||+++++.++||+|||+++++||||+++ ++.++|++|++||++|+||.+|..||++|..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34679999999999999999999999999999999986 56788999999999999999999999999775
No 22
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.74 E-value=2.4e-18 Score=158.69 Aligned_cols=106 Identities=15% Similarity=0.305 Sum_probs=91.4
Q ss_pred EEEecCCCCcccccC--CCcEEEEEec-------CCCCCCCCChHHHHHHHHHhh-----ccceEEEEEcccchhhhHHH
Q 010886 138 FNVVTSEDFPSIFHD--SKPWLIQVYS-------DGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLA 203 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~--~~~~lV~FYa-------pwC~~C~~l~p~~~~~A~~l~-----~~i~va~Vdc~~~~~~~~l~ 203 (498)
|++||++||+++|.+ +.+++|.|+| +|||+|+.++|+|+++|+++. +.+.|++||+++++. ++
T Consensus 20 vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~---la 96 (178)
T 3ga4_A 20 VITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ---LV 96 (178)
T ss_dssp EEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH---HH
T ss_pred CEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH---HH
Confidence 789999999998843 5679999999 499999999999999999998 789999999997765 99
Q ss_pred HhCCCCcccceeeeeEEEEeCCCCcCC--------CCcccc---cC-CCCHHHHHHHHHHH
Q 010886 204 ERKPIGQIFFRRGLPSLVAFPPGCKSS--------DCMTRF---EG-ELSVDAVTDWFATA 252 (498)
Q Consensus 204 ~~~~~~~~~~I~~~PTl~~f~~g~~~~--------~~~~~Y---~G-~r~~~~Iv~fv~k~ 252 (498)
++|+ |+++|||++|++|.... .....| .| +++++.|.+|+.++
T Consensus 97 ~~~~------I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 97 KDLK------LQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp HHTT------CCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred HHcC------CCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 9999 99999999999996521 012345 36 89999999999988
No 23
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.2e-19 Score=145.49 Aligned_cols=70 Identities=30% Similarity=0.572 Sum_probs=66.2
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
..|||++|||+++++.++||+|||+|+++||||+++++.++|++|++||++|+||.+|..||++|..+..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 5799999999999999999999999999999999988899999999999999999999999999977643
No 24
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-18 Score=139.35 Aligned_cols=70 Identities=26% Similarity=0.512 Sum_probs=64.6
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---ChHHHHHHHHhhhhHcCChhhhhcccccCCch
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~ 103 (498)
....|||++|||+++++.++||+|||+++++||||+++ .+.++|++|++||++|+||.+|..||.+|..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 34679999999999999999999999999999999876 35788999999999999999999999999765
No 25
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-18 Score=140.08 Aligned_cols=71 Identities=30% Similarity=0.477 Sum_probs=64.8
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC----hHHHHHHHHhhhhHcCChhhhhcccccCCchh
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~ 104 (498)
+...|||++|||+++++.++||+|||+++++||||+++. +.++|++|++||++|+||.+|..||++|+.+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 446799999999999999999999999999999999874 35689999999999999999999999997653
No 26
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.73 E-value=4.4e-18 Score=144.53 Aligned_cols=101 Identities=9% Similarity=0.065 Sum_probs=92.2
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.+|+.++|++.+ ++++++|.||++||++|+.+.|.++++++.+++.+.++.|||++++. +|++++ |+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~~~ 72 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE---TAGKYG------VMSI 72 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS---HHHHTT------CCSB
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------CCcc
Confidence 5789999999999 89999999999999999999999999999998889999999997654 999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 73 PTLLVLKDGEV----VETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999988865 34688999999999999887
No 27
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=4.5e-18 Score=149.80 Aligned_cols=102 Identities=17% Similarity=0.297 Sum_probs=93.4
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|..|+.++|++.+.++++++|.||++||++|+++.|.|+++++.+.+. +.++.|||+++. .+|++++ |
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------v 89 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS---MLASKFD------V 89 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH---HHHHHTT------C
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH---HHHHHCC------C
Confidence 789999999999988999999999999999999999999999999876 899999999664 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+++||+++|++|.. ..|.|.++.+.|.+|+.+.+
T Consensus 90 ~~~Pt~~~~~~G~~-----~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 90 SGYPTIKILKKGQA-----VDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp CSSSEEEEEETTEE-----EECCSCCCHHHHHHHHHHHH
T ss_pred CccCeEEEEECCcE-----EEcCCCCCHHHHHHHHHHhc
Confidence 99999999988863 37899999999999999874
No 28
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.73 E-value=1.8e-18 Score=145.67 Aligned_cols=102 Identities=16% Similarity=0.303 Sum_probs=93.4
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+||.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++ .+|++++ |++
T Consensus 6 v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~ 76 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK---TLFQRFS------LKG 76 (111)
T ss_dssp SEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTT------CCS
T ss_pred ceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh---hHHHhcC------CCc
Confidence 6789999999999 88999999999999999999999999999999988999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|+. ...|.|.++.++|.+|+.+.
T Consensus 77 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 77 VPQILYFKDGEY----KGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp SCEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE----EEEEeccCCHHHHHHHHHHH
Confidence 999999998865 34788999999999999876
No 29
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=3.8e-18 Score=148.64 Aligned_cols=105 Identities=17% Similarity=0.330 Sum_probs=94.0
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhh----ccceEEEEEcccchhhhHHHHhCCCCcc
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQI 211 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~----~~i~va~Vdc~~~~~~~~l~~~~~~~~~ 211 (498)
.|.+|+.++|++.+ +++++++|.||++||++|+++.|.|+++++.++ +.+.++.|||++++. +|++++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~---- 80 (133)
T 1x5d_A 8 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV---LASRYG---- 80 (133)
T ss_dssp SCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH---HHHHHT----
T ss_pred cCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH---HHHhCC----
Confidence 47899999999877 778999999999999999999999999999998 679999999996654 999999
Q ss_pred cceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhh
Q 010886 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (498)
Q Consensus 212 ~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~ 254 (498)
|+++||+++|.+|.. ...|.|.++.++|.+|+.+.+.
T Consensus 81 --v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 --IRGFPTIKIFQKGES----PVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp --CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHHHH
T ss_pred --CCeeCeEEEEeCCCc----eEEecCCCCHHHHHHHHHHHhh
Confidence 999999999999864 3578999999999999998743
No 30
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=2.6e-18 Score=140.56 Aligned_cols=69 Identities=29% Similarity=0.575 Sum_probs=64.6
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhcccccCCch
Q 010886 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (498)
Q Consensus 35 ~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~ 103 (498)
...|||++|||+++++.++||+|||+++++||||+++ .+.++|++|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 3679999999999999999999999999999999986 57889999999999999999999999999764
No 31
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.1e-18 Score=141.10 Aligned_cols=71 Identities=31% Similarity=0.473 Sum_probs=65.2
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 35 ~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
...|||++|||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|..||.+|..+..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 3679999999999999999999999999999999986 3577899999999999999999999999976543
No 32
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.72 E-value=2.5e-18 Score=144.68 Aligned_cols=102 Identities=17% Similarity=0.308 Sum_probs=91.1
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhh---ccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~---~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|.+||.++|++.+. +++++|.||++||++|+.+.|.|+++++.+. +.+.++.|||++++ .+|++++
T Consensus 6 ~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------ 75 (111)
T 3uvt_A 6 TVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER---NICSKYS------ 75 (111)
T ss_dssp CSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH---HHHHHTT------
T ss_pred cceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH---hHHHhcC------
Confidence 478999999999998 7899999999999999999999999999875 34799999999665 4999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...|.|.++.++|.+|+.++
T Consensus 76 v~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 VRGYPTLLLFRGGKK----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHH
T ss_pred CCcccEEEEEeCCcE----EEeccCCcCHHHHHHHHHhc
Confidence 999999999998865 35788999999999999875
No 33
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.71 E-value=4.9e-18 Score=142.17 Aligned_cols=102 Identities=18% Similarity=0.326 Sum_probs=93.6
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.++|.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+.+.++.||+++++ .++++++ |+++
T Consensus 6 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------i~~~ 76 (109)
T 3tco_A 6 TLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ---KIADKYS------VLNI 76 (109)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred EEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH---HHHHhcC------cccC
Confidence 688999999999988999999999999999999999999999999988999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 77 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 77 PTTLIFVNGQL----VDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEcCCcE----EEeeeccCCHHHHHHHHHHH
Confidence 99999988865 34688999999999999876
No 34
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.71 E-value=6.4e-18 Score=140.94 Aligned_cols=101 Identities=19% Similarity=0.265 Sum_probs=91.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.+++.++|++.+ ++++++|.||+|||++|+.+.|.|+++++.+.+.+.++.||+++++. ++++++ |+++
T Consensus 5 v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~~ 74 (106)
T 3die_A 5 IVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS---TAAKYE------VMSI 74 (106)
T ss_dssp CEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCSB
T ss_pred eEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH---HHHhCC------Cccc
Confidence 6789999999999 89999999999999999999999999999999889999999996654 999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|+. ...+.|.++.++|.+|+.+.
T Consensus 75 Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 75 PTLIVFKDGQP----VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CEEEEEeCCeE----EEEEeCCCCHHHHHHHHHHh
Confidence 99999998865 34788999999999998764
No 35
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.71 E-value=1.7e-17 Score=142.20 Aligned_cols=101 Identities=20% Similarity=0.397 Sum_probs=88.9
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-----cceEEEEEcccchhhhHHHHhCCCCcc
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-----IANTGMVELGDIRLATHLAERKPIGQI 211 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-----~i~va~Vdc~~~~~~~~l~~~~~~~~~ 211 (498)
|..|+.++|++.+ .++++++|.||||||++|+++.|.|+++++.+++ .+.++.|||++++ +++ +
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~---- 78 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--E---- 78 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--C----
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--c----
Confidence 7889999999987 7889999999999999999999999999999987 6899999999764 554 6
Q ss_pred cceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|.+|+.. ....|.|.++.++|.+|+.+.
T Consensus 79 --v~~~Pt~~~~~~~~~~--~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 --IQGFPTIKLYPAGAKG--QPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp --CSSSSEEEEECSSCTT--SCCCCCCCSCHHHHHHHHHHT
T ss_pred --cCcCCeEEEEeCcCCC--CceEecCCCCHHHHHHHHHhc
Confidence 9999999999988531 124789999999999999887
No 36
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.71 E-value=1.1e-17 Score=142.26 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=92.3
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc---cceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.+++.++|++.+.++++++|.||++||++|+++.|.|+++++.+++ .+.++.|||++++. +|++++ |
T Consensus 9 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------v 79 (120)
T 1mek_A 9 VLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD---LAQQYG------V 79 (120)
T ss_dssp EEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS---SHHHHT------C
T ss_pred cEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH---HHHHCC------C
Confidence 78999999999998899999999999999999999999999999874 47999999996654 889998 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|... .+..|.|.++.+.|.+|+.+.
T Consensus 80 ~~~Pt~~~~~~g~~~--~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 80 RGYPTIKFFRNGDTA--SPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp CSSSEEEEEESSCSS--SCEECCCCSSHHHHHHHHHTT
T ss_pred CcccEEEEEeCCCcC--CcccccCccCHHHHHHHHHhc
Confidence 999999999888641 125788999999999999876
No 37
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.71 E-value=1.2e-17 Score=140.05 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=91.6
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+++.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.||+++++. ++++++ |++
T Consensus 4 v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 74 (108)
T 2trx_A 4 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------IRG 74 (108)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT---HHHHTT------CCS
T ss_pred ceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------Ccc
Confidence 7889999999665 788999999999999999999999999999998889999999997654 999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|.++.++|.+|+.+.
T Consensus 75 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 75 IPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred cCEEEEEeCCEE----EEEEecCCCHHHHHHHHHHh
Confidence 999999988865 34678999999999999875
No 38
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.70 E-value=1.3e-17 Score=148.85 Aligned_cols=105 Identities=17% Similarity=0.306 Sum_probs=95.7
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
+..++.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++ .++++|+ |+++
T Consensus 40 v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------v~~~ 110 (148)
T 3p2a_A 40 VINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP---ALSTRFR------IRSI 110 (148)
T ss_dssp CEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred ceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH---HHHHHCC------CCcc
Confidence 789999999999999999999999999999999999999999999888999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhc
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILK 255 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~ 255 (498)
||+++|++|.. ...|.|.++.+.|.+|+.+.+..
T Consensus 111 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 111 PTIMLYRNGKM----IDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SEEEEEETTEE----EEEESSCCCHHHHHHHHHHHHHS
T ss_pred CEEEEEECCeE----EEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999998865 34788999999999999987543
No 39
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.70 E-value=6.8e-18 Score=140.85 Aligned_cols=102 Identities=12% Similarity=0.196 Sum_probs=90.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.+|++++|+..++++++++|.||++||++|+.+.|.++++++.+.+.+.++.||+++++ .++++++ |+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~------v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP---ETTSQFG------IMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH---HHHHHcC------Cccc
Confidence 578999999988888999999999999999999999999999999888999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRP----VKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeE----EEEEecCCCHHHHHHHHHHH
Confidence 99999988864 34688999999999988654
No 40
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.70 E-value=9.5e-18 Score=141.33 Aligned_cols=70 Identities=27% Similarity=0.500 Sum_probs=64.7
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---ChHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
..|||+||||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|..||++|+.+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 469999999999999999999999999999999976 3678899999999999999999999999987643
No 41
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.70 E-value=3.5e-17 Score=161.95 Aligned_cols=102 Identities=17% Similarity=0.291 Sum_probs=93.4
Q ss_pred EEEecCCCCcccccC--CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 138 FNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
|.++|.++|++.+.. +++++|.||||||++|+.+.|.|+++++++++.+.+++|||++++ .+|++|+ |+
T Consensus 9 v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~ 79 (287)
T 3qou_A 9 IVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ---MIAAQFG------LR 79 (287)
T ss_dssp EEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH---HHHHTTT------CC
T ss_pred cEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH---HHHHHcC------CC
Confidence 789999999998843 899999999999999999999999999999988999999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ...|.|.++.+.+..|+...
T Consensus 80 ~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 80 AIPTVYLFQNGQP----VDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCCeEEEEECCEE----EEEeeCCCCHHHHHHHHHHH
Confidence 9999999998865 34789999999999999987
No 42
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.70 E-value=1.2e-17 Score=138.33 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=91.5
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.+||.++|++.++++++++|.||++||++|+.+.|.++++++.+.+ +.++.||+++++ .++++++ |+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~~~~~------v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENP---DIAARYG------VMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCH---HHHHhCC------cccc
Confidence 46899999999998899999999999999999999999999999988 999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 71 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEP----VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE----hhhccCCCCHHHHHHHHHHH
Confidence 99999988865 34688999999999999876
No 43
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.4e-17 Score=144.10 Aligned_cols=100 Identities=19% Similarity=0.396 Sum_probs=89.4
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|.+||.++|++.++.. ++|.|||+||++|+++.|.|+++++.+.+ .+.++.|||++++ .+|++++ |+
T Consensus 8 ~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------v~ 76 (126)
T 1x5e_A 8 NVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP---GLSGRFI------IN 76 (126)
T ss_dssp SEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred ccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH---HHHHHcC------Cc
Confidence 47899999999887543 99999999999999999999999999986 5899999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ..|.|.++.++|.+|+.+.
T Consensus 77 ~~Pt~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 77 ALPTIYHCKDGEF-----RRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp SSSEEEEEETTEE-----EECCSCCCHHHHHHHHHTC
T ss_pred ccCEEEEEeCCeE-----EEeecCCCHHHHHHHHHHH
Confidence 9999999988864 3789999999999999876
No 44
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.69 E-value=1.2e-17 Score=148.00 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=93.4
Q ss_pred EEEecCCCCc-ccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFP-SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~-~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+|+.++|+ .+++++++++|.||+|||++|+++.|.|+++++.+.+.+.++.|||++++ .+|++++ |++
T Consensus 8 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~ 78 (140)
T 3hz4_A 8 IIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP---WTAEKYG------VQG 78 (140)
T ss_dssp EEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH---HHHHHHT------CCE
T ss_pred eEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH---hHHHHCC------CCc
Confidence 7899999999 55688999999999999999999999999999999998999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 79 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 79 TPTFKFFCHGRP----VWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp ESEEEEEETTEE----EEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHHh
Confidence 999999998865 357889999999999998873
No 45
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.69 E-value=1.1e-17 Score=140.33 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=77.3
Q ss_pred cCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEE
Q 010886 142 TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 142 t~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
|.++|++.++++++++|.||||||++|+.+.|.++++++.+. .+.++.||+++++. ++++++ |+++||++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~---l~~~~~------v~~~Pt~~ 76 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQE---IAGRYA------VFTGPTVL 76 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHH---HHHhcC------CCCCCEEE
Confidence 568899999999999999999999999999999999999884 58999999996654 899998 99999999
Q ss_pred EeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 222 AFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 222 ~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+|++|+. ...+.|.++.++|.+++.+.
T Consensus 77 ~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 77 LFYNGKE----ILRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEETTEE----EEEEESSCCHHHHHHHHHTT
T ss_pred EEeCCeE----EEEEeCCcCHHHHHHHHHHh
Confidence 9998865 34678999999999999765
No 46
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.69 E-value=2.2e-17 Score=137.91 Aligned_cols=102 Identities=18% Similarity=0.247 Sum_probs=91.6
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+++.++|++.+ +++++++|.||+|||++|+.+.|.++++++.+.+.+.++.|||++++. ++++++ |++
T Consensus 4 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 74 (107)
T 2i4a_A 4 TLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE---TPNAYQ------VRS 74 (107)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH---HHHHTT------CCS
T ss_pred eeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH---HHHhcC------CCc
Confidence 7899999999776 788999999999999999999999999999998889999999996654 999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 75 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 75 IPTLMLVRDGKV----IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHT
T ss_pred cCEEEEEeCCEE----EEEecCCCCHHHHHHHHHhc
Confidence 999999988865 34688999999999999764
No 47
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=5.6e-18 Score=141.46 Aligned_cols=69 Identities=26% Similarity=0.496 Sum_probs=62.0
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC----hHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 37 ~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
.|||++|||+++++.++||+|||+++++||||+++. +.++|++|++||++|+||.+|..||.+|..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 589999999999999999999999999999999874 467899999999999999999999999866543
No 48
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=2.7e-17 Score=143.51 Aligned_cols=105 Identities=17% Similarity=0.295 Sum_probs=90.6
Q ss_pred eEEEecCCCCccccc-CCCcEEEEEecCCCCCCCCChHHHHHHHHHhh--ccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~--~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|..|+.++|+..+. ++++++|.||+|||++|+.+.|.|+++++.++ +.+.++.|||+++.. ++++|+
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------ 78 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI---TNDQYK------ 78 (133)
T ss_dssp SSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC---CCSSCC------
T ss_pred ceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH---HHhhcC------
Confidence 378999999999985 58999999999999999999999999999998 458999999996654 777787
Q ss_pred eeeeeEEEEeCCCCcCCCCccccc-CCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFE-GELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~-G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|.+|... ....|. |.++.++|.+|+.+.
T Consensus 79 v~~~Pt~~~~~~g~~~--~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 79 VEGFPTIYFAPSGDKK--NPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp CSSSSEEEEECTTCTT--SCEECCSSCCSTTHHHHHHHHH
T ss_pred CCcCCEEEEEeCCCcc--cceEecCCCcCHHHHHHHHHHh
Confidence 9999999999988642 123577 569999999999988
No 49
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.69 E-value=1.4e-17 Score=139.27 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=92.4
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|.+||.++|+..++++++++|.||++||++|+.+.|.++++++.+.+.+.++.||+++++ .++++++ |.++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~~ 73 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP---KTAMRYR------VMSI 73 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH---hHHHhCC------CCcC
Confidence 678999999988888999999999999999999999999999999888999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|..+.++|.+|+.+.
T Consensus 74 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 74 PTVILFKDGQP----VEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CEEEEEeCCcE----eeeEeCCCCHHHHHHHHHHH
Confidence 99999988865 24688999999999999876
No 50
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.69 E-value=2.3e-17 Score=139.37 Aligned_cols=102 Identities=17% Similarity=0.203 Sum_probs=91.4
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|..+|.++|++.+ +++++++|.||++||++|+.+.|.++++++.+++.+.++.||+++++ .++++++ |++
T Consensus 7 v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 77 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP---GTAAKYG------VMS 77 (112)
T ss_dssp CEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred EEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH---HHHHhCC------CCc
Confidence 6889999998766 67899999999999999999999999999999888999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 78 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 78 IPTLNVYQGGEV----AKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHTHHH
T ss_pred ccEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999988865 34688999999999999876
No 51
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.69 E-value=1.8e-17 Score=149.77 Aligned_cols=102 Identities=17% Similarity=0.294 Sum_probs=93.2
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
+.+++.++|++.++++++++|.||+|||++|+.+.|.|+++++.+.+.+.+++||+++++. ++++|+ |+++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~---l~~~~~------i~~~ 119 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA---VAGRHR------IQGI 119 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH---HHHHTT------CCSS
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH---HHHHcC------CCcC
Confidence 6889999999999889999999999999999999999999999999889999999996654 999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 120 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 120 PAFILFHKGRE----LARAAGARPASELVGFVRGK 150 (155)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCeE----EEEecCCCCHHHHHHHHHHH
Confidence 99999988865 34688999999999999887
No 52
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.69 E-value=4.4e-18 Score=150.41 Aligned_cols=103 Identities=9% Similarity=0.091 Sum_probs=93.8
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCC--CCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
+..+|+++|++.|.++.++||.|||+| ||+|+.++|.++++|+++.+. ++|++||.++++. |+.+|+ |
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~---lA~~yg------V 89 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEA---IGDRFG------A 89 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHH---HHHHHT------C
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHH---HHHHcC------C
Confidence 467999999999988889999999999 999999999999999999999 9999999996654 999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+++||+++|++|+. .....|.++.+.|.+|+.+.+
T Consensus 90 ~sIPTlilFk~G~~----v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FRFPATLVFTGGNY----RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEecCCCHHHHHHHHHHHh
Confidence 99999999999976 356779999999999998874
No 53
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=8.2e-18 Score=138.77 Aligned_cols=72 Identities=29% Similarity=0.473 Sum_probs=65.2
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC----hHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
+...|||++|||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|..||++|..+..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 346799999999999999999999999999999999874 467899999999999999999999999977643
No 54
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.69 E-value=3.7e-17 Score=138.31 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=92.1
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+++.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .++++++ |++
T Consensus 9 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~------v~~ 79 (115)
T 1thx_A 9 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP---TTVKKYK------VEG 79 (115)
T ss_dssp EEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH---HHHHHTT------CCS
T ss_pred eEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH---HHHHHcC------CCc
Confidence 7899999999876 78899999999999999999999999999999888999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 80 ~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 80 VPALRLVKGEQI----LDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred eeEEEEEcCCEE----EEEecCCCCHHHHHHHHHHH
Confidence 999999988865 34688999999999999876
No 55
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.69 E-value=2.6e-17 Score=144.86 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=92.1
Q ss_pred eEEEecCCCCccccc------------CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHH
Q 010886 137 AFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAE 204 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~ 204 (498)
.|.+||.++|++.+. ++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++ .+|+
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~ 86 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ---ELAG 86 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHH
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH---HHHH
Confidence 378899999998774 4689999999999999999999999999999888999999999665 4999
Q ss_pred hCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHHhh
Q 010886 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (498)
Q Consensus 205 ~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~ 254 (498)
+++ |+++||+++| ++|... .|.|.++.+.|.+|+.+...
T Consensus 87 ~~~------v~~~Pt~~~~~~~G~~~-----~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 87 AFG------IRSIPSILFIPMEGKPE-----MAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp HTT------CCSSCEEEEECSSSCCE-----EEESCCCHHHHHHHHHHHHT
T ss_pred HcC------CCCCCEEEEECCCCcEE-----EEeCCCCHHHHHHHHHHHhh
Confidence 999 9999999999 677542 68899999999999998743
No 56
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.68 E-value=2.2e-17 Score=144.17 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=91.7
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|.+|+.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. ++++++ |+
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~ 93 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------IR 93 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT---TSGGGT------CC
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH---HHHHcC------CC
Confidence 47889999999765 789999999999999999999999999999998889999999997654 888888 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ...+.|.++.++|.+|+.+.
T Consensus 94 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 94 GIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCEE----EEEEcCCCCHHHHHHHHHHh
Confidence 9999999988865 34688999999999999875
No 57
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.68 E-value=1.4e-17 Score=146.71 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=92.3
Q ss_pred EEEecCCCCcccccCCC-cEEEEEecCCC--CCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSK-PWLIQVYSDGS--YLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~-~~lV~FYapwC--~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
..++|++||++.|.+.+ ++||.|||+|| |+|+.++|..+++|+++.+.++|++||.++++. |+.+|+ |
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~---la~~yg------V 87 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG---LMARFG------V 87 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH---HHHHHT------C
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 46799999999985555 99999999999 999999999999999999999999999996654 999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++.||+++|++|+. .....|.++.+.|.+|+.+.
T Consensus 88 ~siPTlilFkdG~~----v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 88 AVCPSLAVVQPERT----LGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp CSSSEEEEEECCEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999999999976 35677999999999999876
No 58
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.68 E-value=1.2e-17 Score=143.43 Aligned_cols=107 Identities=14% Similarity=0.274 Sum_probs=92.0
Q ss_pred eEEEecCCCCcc-cccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPS-IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~-~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|.+||.++|++ +++++++++|.||+|||++|+++.|.|+++++.+.+.+.++.|||++++ .+|++++ |+
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~ 74 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP---QTCQKAG------IK 74 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH---HHHHHcC------CC
Confidence 367899999965 5588999999999999999999999999999999888999999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCC----CCHHHHHHHHHHHhhcC
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATAILKL 256 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~----r~~~~Iv~fv~k~~~~~ 256 (498)
++||+++|.+|+. ...+.|. ++.+.|.+|+.+.+...
T Consensus 75 ~~Pt~~~~~~~~~----~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 75 AYPSVKLYQYERA----KKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp SSSEEEEEEEEGG----GTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred ccceEEEEeCCCc----cceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 9999999987754 2356665 89999999998875433
No 59
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=1.4e-17 Score=141.60 Aligned_cols=72 Identities=25% Similarity=0.415 Sum_probs=65.9
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC---hHHHHHHHHhhhhHcCChhhhhcccccCCchhh
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~~ 105 (498)
....|||++|||+++++.++||+|||+|++++|||++++ +.++|++|++||++|+||.+|..||.+|..+..
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 346899999999999999999999999999999999874 467899999999999999999999999977654
No 60
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.68 E-value=5.6e-17 Score=157.64 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=89.5
Q ss_pred EEEecCCCCcccccCCCcEEEEEe--cCCCCCCCCChHHHHHHHHHhhc---cceEEEEEccc--chhhhHHHHhCCCCc
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVY--SDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGD--IRLATHLAERKPIGQ 210 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FY--apwC~~C~~l~p~~~~~A~~l~~---~i~va~Vdc~~--~~~~~~l~~~~~~~~ 210 (498)
|.+||++||+++++++++|||.|| ||||+ ++|.|+++|+.+.+ .+.|++|||++ .+....||++|+
T Consensus 18 v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~--- 90 (248)
T 2c0g_A 18 CVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK--- 90 (248)
T ss_dssp CEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT---
T ss_pred cEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC---
Confidence 789999999998888999999999 99999 99999999999954 58999999997 111345999999
Q ss_pred cccee--eeeEEEEeCCCCcCCCCcccc--cCCCCHHHHHHHHHHHh
Q 010886 211 IFFRR--GLPSLVAFPPGCKSSDCMTRF--EGELSVDAVTDWFATAI 253 (498)
Q Consensus 211 ~~~I~--~~PTl~~f~~g~~~~~~~~~Y--~G~r~~~~Iv~fv~k~~ 253 (498)
|+ +||||++|+ |.. ..+..| .|.++.++|++|+.+.+
T Consensus 91 ---V~~~~~PTl~~F~-G~~--~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 91 ---VDDKNFPSIFLFK-GNA--DEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp ---CCTTSCCEEEEES-SSS--SSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred ---CCcCCCCeEEEEe-CCc--CcceeecccCCCCHHHHHHHHHHhh
Confidence 99 999999999 862 125689 99999999999999873
No 61
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.1e-17 Score=143.10 Aligned_cols=71 Identities=24% Similarity=0.293 Sum_probs=65.0
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---ChHHHHHHHHhhhhHcCChhhhhcccccCCchh
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~~ 104 (498)
....|||++|||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|..||++|..+.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 34689999999999999999999999999999999986 367899999999999999999999999986653
No 62
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=3.7e-17 Score=136.65 Aligned_cols=69 Identities=23% Similarity=0.366 Sum_probs=62.7
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC---hHHHHHHHHhhhhHcCChhhhhcccccCCch
Q 010886 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (498)
Q Consensus 35 ~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~ 103 (498)
...|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|..||++....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 86 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSD 86 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccc
Confidence 36799999999999999999999999999999999863 5788999999999999999999999865443
No 63
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.67 E-value=3e-17 Score=137.33 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=91.0
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.++|.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.||+++++ .++++++ |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 73 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP---NVASEYG------IRS 73 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHHT------CCS
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH---HHHHHCC------CCc
Confidence 5789999999876 77899999999999999999999999999999888999999999665 4999998 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|..+.+.|.+++.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 74 IPTIMVFKGGKK----CETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SCEEEEESSSSE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999988865 34678999999999999875
No 64
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.67 E-value=5.2e-17 Score=135.11 Aligned_cols=102 Identities=13% Similarity=0.207 Sum_probs=90.8
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|..+|.++|++.+ +++++++|.||++||++|+.+.|.++++++.+++.+.++.||+++++ .++++++ |++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP---GIATQYN------IRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH---HHHHhCC------CCc
Confidence 5789999999866 67899999999999999999999999999999888999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|..+.+.+.+++.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 73 IPTVLFFKNGER----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp SSEEEEEETTEE----EEEEEECCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEecCCCHHHHHHHHHhh
Confidence 999999988865 34678999999999999765
No 65
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.67 E-value=4.6e-17 Score=143.59 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=90.8
Q ss_pred eEEEecCCCCccccc------------CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHH
Q 010886 137 AFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAE 204 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~ 204 (498)
.|..|+.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|+
T Consensus 23 ~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~ 99 (141)
T 3hxs_A 23 GTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP---ELAR 99 (141)
T ss_dssp CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHH
T ss_pred CcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH---HHHH
Confidence 378899999988874 4899999999999999999999999999999988999999999665 4999
Q ss_pred hCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 205 RKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 205 ~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+|+ |+++||+++|.+++. ...|.|.++.+.|.+|+.+.
T Consensus 100 ~~~------v~~~Pt~~~~~~~g~----~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 100 DFG------IQSIPTIWFVPMKGE----PQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HTT------CCSSSEEEEECSSSC----CEEEESCCCHHHHHHHHHHT
T ss_pred HcC------CCCcCEEEEEeCCCC----EEEEeCCCCHHHHHHHHHHH
Confidence 999 999999999955443 23788999999999999876
No 66
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.67 E-value=1.9e-17 Score=141.74 Aligned_cols=99 Identities=11% Similarity=0.172 Sum_probs=88.4
Q ss_pred EEecCCCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 139 NVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 139 ~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
...|.++|++.+. ++++++|.|||+||++|+++.|.|+++++.+.+ +.+++||+++++ .++++++ |++
T Consensus 15 ~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~---~l~~~~~------v~~ 84 (116)
T 3qfa_C 15 QIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASECE------VKS 84 (116)
T ss_dssp CCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH---HHHHHTT------CCS
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHcC------Ccc
Confidence 4578899999996 899999999999999999999999999999987 999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.|. +.+.|.+++.+.
T Consensus 85 ~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 85 MPTFQFFKKGQK----VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSEEEEESSSSE----EEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEcCC-CHHHHHHHHHHh
Confidence 999999988865 3467898 999999999875
No 67
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.67 E-value=4.3e-17 Score=141.39 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=84.7
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCC--------------CCCCChHHHHHHHHHhhccceEEEEEcccchhhhHH
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSY--------------LCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHL 202 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~--------------~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l 202 (498)
|.+|+.++|++.+ +++++++|.||||||+ +|+++.|.|+++++.+.+.+.+++||+++++. +
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~---l 81 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---T 81 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT---T
T ss_pred cEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---H
Confidence 7889999998655 7899999999999999 99999999999999998889999999997654 8
Q ss_pred HHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 203 AERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 203 ~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++++ |+++||+++|++|.. ...+.|.++.++|.+|+.+.
T Consensus 82 ~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 82 APKYG------IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGGT------CCBSSEEEEEESSSE----EEEEESCCCHHHHHHHHTTT
T ss_pred HHHcC------CCccCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 88888 999999999988865 34688999999999998754
No 68
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.67 E-value=8.2e-17 Score=154.53 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=93.1
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
+..++.++|++.+.++++++|.|||+||++|+.+.|.|+++|+.+.+. +.+++|||++++ .+|++++ |
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v 202 (241)
T 3idv_A 132 TLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET---DLAKRFD------V 202 (241)
T ss_dssp SEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTT------C
T ss_pred ceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---HHHHHcC------C
Confidence 578999999999988999999999999999999999999999999765 899999999665 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|+.. .|.|.++.++|++|+.++
T Consensus 203 ~~~Pt~~~~~~g~~~-----~~~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 203 SGYPTLKIFRKGRPY-----DYNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp CSSSEEEEEETTEEE-----ECCSCCSHHHHHHHHHHH
T ss_pred cccCEEEEEECCeEE-----EecCCCCHHHHHHHHHhh
Confidence 999999999998753 699999999999999988
No 69
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.66 E-value=4.8e-17 Score=139.68 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=91.9
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|..+|.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++ .++++++ |+
T Consensus 14 ~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~------v~ 84 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT---DLAIEYE------VS 84 (119)
T ss_dssp EEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH---HHHHHTT------CC
T ss_pred EEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHHcC------CC
Confidence 37889999999866 77899999999999999999999999999999888999999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 85 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 85 AVPTVLAMKNGDV----VDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999999988865 34688999999999999875
No 70
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.66 E-value=3.7e-17 Score=139.96 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=91.7
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.|.+++.++|++.+ +++++++|.||++||++|+.+.|.++++++.+++.+.++.|||++++ .+|++++ |+
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------i~ 83 (121)
T 2i1u_A 13 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP---ETARNFQ------VV 83 (121)
T ss_dssp CSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred cceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HHHHhcC------CC
Confidence 47889999998765 77899999999999999999999999999999888999999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 84 ~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 84 SIPTLILFKDGQP----VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHTCSC
T ss_pred cCCEEEEEECCEE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999998865 34688999999999998765
No 71
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.5e-17 Score=146.60 Aligned_cols=102 Identities=16% Similarity=0.301 Sum_probs=87.9
Q ss_pred EEEecCCCCcccccCC--CcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDS--KPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~--~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.++|.++|++.+.++ ++++|.||||||++|+.+.|.|+++++++++ .+.++.|||++++ .+|++++ |
T Consensus 9 v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~---~~~~~~~------v 79 (137)
T 2dj0_A 9 IKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT---DVSTRYK------V 79 (137)
T ss_dssp CEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---HHHHHTT------C
T ss_pred EEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---HHHHHcc------C
Confidence 7889999999998443 4999999999999999999999999999986 6899999999665 4999999 8
Q ss_pred e------eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 R------GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~------~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+ ++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 80 ~~~~~~~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 80 STSPLTKQLPTLILFQGGKE----AMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CCCSSSSCSSEEEEESSSSE----EEEESCBCSSSCBCCCCCCH
T ss_pred cccCCcCCCCEEEEEECCEE----EEEecCcCchHHHHHHHhcc
Confidence 7 9999999998875 34678998888888877543
No 72
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.65 E-value=1.3e-16 Score=142.21 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=77.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCC--CCCCCCChHHHHHHHHHhhccce--EEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGIAN--TGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~l~~~i~--va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
+..||+++|++.+.+++.++|.|+++| |++|+.++|.|+++|+++ +.+. +++||+++++ ++|++|+
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~---~la~~~~------ 88 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSE---AIGDRFN------ 88 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHH---HHHHTTT------
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCH---HHHHhcC------
Confidence 578999999999988888999999987 999999999999999999 7788 9999999554 5999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
|+++||+++|++|+. ...|.|.++.++|.+|+.+.+
T Consensus 89 V~~iPT~~~fk~G~~----v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 89 VRRFPATLVFTDGKL----RGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CCSSSEEEEESCC--------CEESCCCHHHHHHHHHHHH
T ss_pred CCcCCeEEEEeCCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999875 357889999999999999874
No 73
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.65 E-value=2.7e-15 Score=143.94 Aligned_cols=201 Identities=7% Similarity=0.048 Sum_probs=148.7
Q ss_pred EEEec-CCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt-~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
+.+|+ .++|+++++++++++|.||+|| |+.+.|+|.++|+.+ ..+.+|.+. + .++|++++ |++
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t~---~---~~v~~~~~------v~~ 74 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGIST---D---SEVLTHYN------ITG 74 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEEC---C---HHHHHHTT------CCS
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEEC---C---HHHHHHcC------CCC
Confidence 46674 4889999999999999999998 568999999999999 478888754 2 34899998 888
Q ss_pred eeEEEEeCCCCcCCCCccccc----CCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecC-CCC
Q 010886 217 LPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-GER 291 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~----G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~-~~~ 291 (498)
|+|++|+++... ...|. |.++.++|.+|+.+. ..|.+..++.++ ...+.+.. -...+++|.+. +..
T Consensus 75 -p~i~lfk~~~~~---~~~~~~~~~g~~~~~~l~~fi~~~--~~plv~e~t~~n-~~~~~~~~--~~~~~l~f~~~~~~~ 145 (227)
T 4f9z_D 75 -NTICLFRLVDNE---QLNLEDEDIESIDATKLSRFIEIN--SLHMVTEYNPVT-VIGLFNSV--IQIHLLLIMNKASPE 145 (227)
T ss_dssp -SEEEEEETTTTE---EEEECHHHHHTCCHHHHHHHHHHH--CCCSEEECCHHH-HHHHHHSS--CCEEEEEEECTTSTT
T ss_pred -CeEEEEEecCcc---cccccccccCCCCHHHHHHHHHHh--CCCceeecCccc-HHHHhccC--CceEEEEEEcCCcch
Confidence 999999975432 34787 489999999999998 577766676555 44554432 12455556432 111
Q ss_pred ---CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCC--CCCEEEEEeCCCCceeee-cCCCChhHHHHHHHhc
Q 010886 292 ---ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY-YGSFNNSRLSEVMEQN 363 (498)
Q Consensus 292 ---~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~--~~Pti~lfk~~~~~~~~y-~g~~~~~~L~~fi~~~ 363 (498)
..+.++.+|..+++.+.|+++...+.....+++.||++ .+|+|+++...+.....+ .++++.+.|.+|++..
T Consensus 146 ~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 146 YEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 12556678999999999999875433345678999998 689999998654433333 3778999999999863
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.65 E-value=9.9e-17 Score=139.54 Aligned_cols=100 Identities=13% Similarity=0.097 Sum_probs=89.1
Q ss_pred EEEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+|++ ++|++.++++++++|.|||+||++|+.+.|.|+++++.+. .+.++.|||++++ .++++++ |++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~------v~~ 90 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNS---EIVSKCR------VLQ 90 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTT------CCS
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH---HHHHHcC------CCc
Confidence 678999 9999999899999999999999999999999999999984 4899999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...+.| .+.+.|.+|+.+.
T Consensus 91 ~Pt~~i~~~G~~----~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM----LGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEeC-CCHHHHHHHHHHH
Confidence 999999988865 246778 6889999999876
No 75
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.64 E-value=3e-17 Score=135.95 Aligned_cols=66 Identities=21% Similarity=0.442 Sum_probs=60.8
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC---------ChHHHHHHHHhhhhHcCChhhhhcccccCC
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---------PSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~---------~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~ 101 (498)
..|||+||||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|..||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 679999999999999999999999999999999975 245789999999999999999999998643
No 76
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.64 E-value=1.4e-16 Score=138.60 Aligned_cols=98 Identities=11% Similarity=0.108 Sum_probs=85.4
Q ss_pred ecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEE
Q 010886 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 141 Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
++.+.++....++++++|.|||+||++|+++.|.++++++.+++.+.++.|||++++ .++++++ |+++||+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~------v~~~Pt~ 100 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE---SLARKFS------VKSLPTI 100 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH---HHHHHTT------CCSSSEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---HHHHHcC------CCCcCEE
Confidence 444456666688999999999999999999999999999999988999999999665 4999999 9999999
Q ss_pred EEeCCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 221 ~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
++|++|+. ...+.|.++.++|.+|+.+
T Consensus 101 ~~~~~G~~----~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 101 ILLKNKTM----LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEETTEE----EEEESSCCCHHHHHHHHTT
T ss_pred EEEECCEE----EEEecCCCCHHHHHHHHHh
Confidence 99988865 3478899999999999864
No 77
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.64 E-value=1.8e-16 Score=133.88 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=87.7
Q ss_pred eEEEecCCCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc-cchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~-~~~~~~~l~~~~~~~~~~~ 213 (498)
.|..|+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.||++ +++ .++++++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~---~~~~~~~------ 75 (111)
T 2pu9_C 6 KVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENK---TLAKELG------ 75 (111)
T ss_dssp SEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTH---HHHHHHC------
T ss_pred ccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchH---HHHHHcC------
Confidence 378999999999885 589999999999999999999999999999876 889999998 444 4999998
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||++++++|.. ...+.|.. .++|.+++.+.
T Consensus 76 v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 76 IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp CSBSSEEEEESSSSE----EEEEESSC-HHHHHHHHHHH
T ss_pred CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 999999999999875 23577875 89999998765
No 78
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.64 E-value=2e-16 Score=153.21 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=88.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEec--CCCCCCCCChHHHHHHHHHhhc--cceEEEEEccc--chhhhHHHHhCCCCcc
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYS--DGSYLCGQFSGAWKTIAALLEG--IANTGMVELGD--IRLATHLAERKPIGQI 211 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYa--pwC~~C~~l~p~~~~~A~~l~~--~i~va~Vdc~~--~~~~~~l~~~~~~~~~ 211 (498)
|.+||++||+++++++++|||.||| |||+ +.|.|+++|+.+.+ .+.|++|||++ ......||++|+
T Consensus 7 v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~---- 78 (240)
T 2qc7_A 7 ALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYK---- 78 (240)
T ss_dssp CEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTT----
T ss_pred ceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcC----
Confidence 6889999999999889999999999 9999 99999999999974 58999999543 112345999999
Q ss_pred ccee--eeeEEEEeCCCC-cCCCCcccccCCCCHHHHHHHHHHH
Q 010886 212 FFRR--GLPSLVAFPPGC-KSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~--~~PTl~~f~~g~-~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+ +||||++|++|. .. +..|.|.++.++|++|+.+.
T Consensus 79 --V~~~~~PTl~~f~~G~~~~---~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 79 --LDKESYPVFYLFRDGDFEN---PVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp --CCGGGCSEEEEEETTCSSC---CEECCSCSCHHHHHHHHHHT
T ss_pred --CCCCCCCEEEEEeCCCcCc---ceeecCCCCHHHHHHHHHHh
Confidence 99 999999999997 22 45899999999999999987
No 79
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.64 E-value=1.6e-16 Score=133.24 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=84.8
Q ss_pred EEEe-cCCCCcccc--cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVV-TSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~L-t~~nF~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.++ +.++|++.+ +++++++|.||+|||++|+++.|.++++++.+ +.+.++.||+++++ .++++++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~---~~~~~~~------v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQ---GTAATNN------I 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH---HHHHHTT------C
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCH---HHHHhcC------C
Confidence 4556 568899998 57999999999999999999999999999998 45899999999665 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|.. ...+.|.. .++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 73 SATPTFQFFRNKVR----IDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp CSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EEEEeCCC-HHHHHHHHHHh
Confidence 99999999998865 24677854 56699998775
No 80
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.64 E-value=1.9e-15 Score=146.71 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=133.1
Q ss_pred Ccccc-cCCCcEEEEEecCC--CCCCCCChHHHHHHHHH---hhcc--ceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 146 FPSIF-HDSKPWLIQVYSDG--SYLCGQFSGAWKTIAAL---LEGI--ANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 146 F~~~v-~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~---l~~~--i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
|...+ +-..+++|.||++| |++|+.+.|.++++|+. .++. +.|+++|+++++ .+|++|+ |+++
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~---~~~~~~g------v~~~ 87 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS---DKFSEFK------VERV 87 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH---HHHHHTT------CCSS
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH---HHHHhcC------CCcC
Confidence 33344 33578999999999 99999999999999987 3444 899999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhh-cCCcccccccchhhhhhhhhcCCCcEEEEEEecCC-CC--Cc
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL-KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTG-ER--AS 293 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~-~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~-~~--~~ 293 (498)
||+++| +| . ..|.|.++.+.+.+|+...+. ..+... ++ ++..+. +.......+++.|+++.| .| ..
T Consensus 88 Pt~~i~-~g-~-----~~~~G~~~~~~l~~fv~~~l~~~~~~~~-l~-~~~~~~-~~~~~~~~~vv~F~a~wC~~C~~~~ 157 (243)
T 2hls_A 88 PTVAFL-GG-E-----VRWTGIPAGEEIRALVEVIMRLSEDESG-LE-DATKEA-LKSLKGRVHIETIITPSCPYCPYAV 157 (243)
T ss_dssp SEEEET-TT-T-----EEEESCCCTTHHHHHHHHHHHHHTTCCC-CC-HHHHHH-HHHCCSCEEEEEEECSSCSSHHHHH
T ss_pred CEEEEE-CC-c-----eeEcCCCcHHHHHHHHHHHHhccCCCCC-CC-HHHHHH-HHHcCCCcEEEEEECCCCCCcHHHH
Confidence 999999 55 3 389999988899999877532 122211 22 221222 222221223455666533 22 34
Q ss_pred HHHHHHHHhcc----ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 294 PFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 294 ~~~~~~A~~~~----~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
+.+..++..+. ..+.++.+... ..++++++|+|.++||+++ + +. +.|.|..+.++|.+||.+..
T Consensus 158 p~l~~la~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~V~~vPt~~i--~-G~--~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 158 LLAHMFAYEAWKQGNPVILSEAVEAY--ENPDIADKYGVMSVPSIAI--N-GY--LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEETT--TCHHHHHHTTCCSSSEEEE--T-TE--EEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccccCCcEEEEEEECc--cCHHHHHHcCCeeeCeEEE--C-CE--EEEeCCCCHHHHHHHHHHHh
Confidence 55666776652 34556655422 2367999999999999988 3 32 35899999999999998753
No 81
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.64 E-value=4.6e-14 Score=144.19 Aligned_cols=285 Identities=13% Similarity=0.172 Sum_probs=192.7
Q ss_pred EEEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|..|++ ++++++++++++++|-||.+-+..+ ...|.++|+.+ ..+.|+.++ + .++|++++ |++
T Consensus 19 ~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~---~---~~v~~~~~------v~~ 82 (361)
T 3uem_A 19 ATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITS---N---SDVFSKYQ------LDK 82 (361)
T ss_dssp SEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEEC---C---HHHHHHTT------CSS
T ss_pred ceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEEC---c---HHHHHHhC------CCC
Confidence 566754 7788889999999999998766544 57999999999 557776444 2 23999999 888
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCC---CCc
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE---RAS 293 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~---~~~ 293 (498)
|++++|++.... ...|.|..+.++|.+|+... ..|....++.++ ...+..... ..++++|+.+.+. ...
T Consensus 83 -~~i~lfk~f~~~---~~~~~g~~~~~~i~~fi~~~--~~p~v~~~~~~~-~~~~~~~~~-~~~~v~F~~~~~~~~~~~~ 154 (361)
T 3uem_A 83 -DGVVLFKKFDEG---RNNFEGEVTKENLLDFIKHN--QLPLVIEFTEQT-APKIFGGEI-KTHILLFLPKSVSDYDGKL 154 (361)
T ss_dssp -SEEEEEESSTTS---EEECCSCCCHHHHHHHHHHH--SSCSEEECSTTT-HHHHHSCSC-CEEEEEECCSSSSSHHHHH
T ss_pred -CeEEEEEecCCC---ccccCCcCCHHHHHHHHHHc--CCCcceecCccc-HHHHhcCCC-CcEEEEEEeCCchhHHHHH
Confidence 999999873221 45899999999999999998 567666566555 445544321 1234445543321 123
Q ss_pred HHHHHHHHhccccceEEEEEecccccHHHHHHcCCCC--CCEEEEEeCCCCceeeec---CCCChhHHHHHHHhcccCC-
Q 010886 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--APAIVFLKDPGVKPVVYY---GSFNNSRLSEVMEQNKLQE- 367 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~--~Pti~lfk~~~~~~~~y~---g~~~~~~L~~fi~~~~~~~- 367 (498)
+.++.+|..+++.+.|+.+.....+...+++.|||+. +|+++++..++ ....|. |.++.+.|.+|++...-..
T Consensus 155 ~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~ 233 (361)
T 3uem_A 155 SNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKI 233 (361)
T ss_dssp HHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCC
Confidence 5667799999888888887643223578999999987 99999998643 334554 7889999999998753221
Q ss_pred -----------------CCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCchhhHHHHHHHHHHHHhhccccccc
Q 010886 368 -----------------LPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESN 430 (498)
Q Consensus 368 -----------------vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~ 430 (498)
+..++..++.+..-.. ++ .++|.+..+--.....+...+.++++
T Consensus 234 ~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~------~k----~~lv~f~a~wC~~C~~~~p~~~~la~--------- 294 (361)
T 3uem_A 234 KPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDE------KK----NVFVEFYAPWCGHCKQLAPIWDKLGE--------- 294 (361)
T ss_dssp CCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCT------TC----EEEEEEECTTCHHHHHHHHHHHHHHH---------
T ss_pred cccccCCCCCcccccCCcEEeecCchhhhcccC------CC----cEEEEEecCcCHhHHHHHHHHHHHHH---------
Confidence 2233344433322111 12 24444444443445677778888888
Q ss_pred ccccCCCchHHHHhccCC-ceEEEEEeCccCchhhhhhhhhhheeeeccCCceeeeeeccc
Q 010886 431 AADTDQSLAPAAVAFRNK-RLTFAWLDGEAQDVSFIMLISLFYVDFFLHSDLFVLWLLFPS 490 (498)
Q Consensus 431 ~~~~~~~~~~~a~~~~~~-~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (498)
.++++ .+.|++||+..+. +.-|....+|.++++.+.
T Consensus 295 -------------~~~~~~~v~~~~vd~~~~~-----------~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 295 -------------TYKDHENIVIAKMDSTANE-----------VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp -------------HTTTCSSEEEEEEETTTCB-----------CSSCCCCSSSEEEEECSS
T ss_pred -------------HhccCCcEEEEEEECCccc-----------hhhcCCcccCeEEEEECC
Confidence 56553 5999999987754 344788899999988544
No 82
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.64 E-value=1.2e-16 Score=133.16 Aligned_cols=101 Identities=14% Similarity=0.215 Sum_probs=88.6
Q ss_pred EEEecC-CCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.++++ ++|++.+. ++++++|.||++||++|+++.|.++++++.+++.+.++.||+++++ .++++++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE---DIAMEYN------I 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTT------C
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH---HHHHHcC------C
Confidence 467888 88999886 7999999999999999999999999999999877999999999665 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|.. ...+.| .+.++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK----VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp CSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHT
T ss_pred CcccEEEEEcCCcE----EEEEcC-CCHHHHHHHHHHh
Confidence 99999999998865 346778 7899999998764
No 83
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.64 E-value=1.1e-16 Score=143.54 Aligned_cols=106 Identities=11% Similarity=0.051 Sum_probs=88.6
Q ss_pred EEEecC-CCCcccc--cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~-~nF~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.+|+. ++|++.| +++++++|.|||+|||+|+.++|.++++|+++++.+.|++||.++++. ++++|+ |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e---~a~~y~------V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD---FNTMYE------L 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTTTT------C
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 456655 7899887 478899999999999999999999999999999889999999997765 889998 9
Q ss_pred eeeeEEEEeCCCCcCC-C----CcccccCCCC-HHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSS-D----CMTRFEGELS-VDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~-~----~~~~Y~G~r~-~~~Iv~fv~k~ 252 (498)
++.||+++|++|+... . +.....|..+ .+.|++++.+.
T Consensus 94 ~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 94 YDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 9999999999997520 0 0014678877 88999998775
No 84
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.9e-16 Score=133.77 Aligned_cols=101 Identities=9% Similarity=0.129 Sum_probs=84.4
Q ss_pred EEEecC-CCCcccccC---CCcEEEEEecCCCCCCCCChHHHHHHHHHhh-ccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVVTS-EDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~---~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|.+|++ ++|++.+.+ +++++|.||++||++|+.+.|.++++++.++ +.+.++.||+++++ .++++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~----- 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS---EISELFE----- 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH---HHHHHTT-----
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH---HHHHHcC-----
Confidence 577888 999998865 8999999999999999999999999999863 44899999999665 4999999
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...+.|.. .++|.+++.+.
T Consensus 74 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 -ISAVPYFIIIHKGTI----LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp -CCSSSEEEEEETTEE----EEEECSCC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEECCEE----EEEecCCC-HHHHHHHHHHH
Confidence 999999999988865 24677874 55699999876
No 85
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.63 E-value=2.3e-16 Score=139.28 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=78.3
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
.|.+++.++|+..+.+++.++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++ .++++++ |++
T Consensus 34 ~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~ 104 (140)
T 1v98_A 34 WVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP---GLAARYG------VRS 104 (140)
T ss_dssp ---------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTT------CCS
T ss_pred ccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH---HHHHHCC------CCc
Confidence 3688999999998854444999999999999999999999999999888999999999665 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 105 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 105 VPTLVLFRRGAP----VATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred cCEEEEEeCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999998865 34688999999999999876
No 86
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.63 E-value=4.2e-17 Score=138.78 Aligned_cols=68 Identities=26% Similarity=0.335 Sum_probs=62.8
Q ss_pred ccccccccCCCCCC-CHHHHHHHHHHHHhhcCCCCCCC------hHHHHHHHHhhhhHcCChhhhhcccccCCch
Q 010886 36 PPSHYDALGIKPYS-SVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (498)
Q Consensus 36 ~~d~y~ilgv~~~a-~~~~ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~~ 103 (498)
..|||++|||+++| +.++||+|||++++++|||++++ +.++|++|++||++|+||.+|..||++|...
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 67999999999999 99999999999999999999864 5678999999999999999999999987543
No 87
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.63 E-value=2.1e-16 Score=151.07 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=93.5
Q ss_pred EEEecCCCCccc-ccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSI-FHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~-v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
+..||.++|++. ++++++++|.||||||++|+.+.|.|+++++.+++.+.++.|||++++. +|++++ |++
T Consensus 14 ~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---l~~~~~------v~~ 84 (222)
T 3dxb_A 14 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------IRG 84 (222)
T ss_dssp CEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT---TGGGGT------CCS
T ss_pred ceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH---HHHHcC------CCc
Confidence 678999999985 5889999999999999999999999999999999889999999997654 888888 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 85 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 85 IPTLLLFKNGEV----AATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp BSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHS
T ss_pred CCEEEEEECCeE----EEEeccccChHHHHHHHHhhc
Confidence 999999998865 347889999999999999883
No 88
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.63 E-value=4.3e-15 Score=144.80 Aligned_cols=187 Identities=14% Similarity=0.114 Sum_probs=139.0
Q ss_pred cCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEE
Q 010886 255 KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (498)
Q Consensus 255 ~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti 334 (498)
.+|++..+++.+.++.|+...+ .++|.+|.+.+......+..+|..+++++.|+.+. .++++++++++. |+|
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~~--v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDKD--ASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGI 75 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSSS--CEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEE
T ss_pred CCCCceeecCHHHHHHHhhcCC--eEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcE
Confidence 3677777877777888887432 35666666543333456677899998999999874 356999999986 999
Q ss_pred EEEeC------CCCceeee-cCCCChhHHHHHHHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCc-
Q 010886 335 VFLKD------PGVKPVVY-YGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS- 406 (498)
Q Consensus 335 ~lfk~------~~~~~~~y-~g~~~~~~L~~fi~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~- 406 (498)
++|++ .++.++.| .|+++.++|.+||+.+.+|+++++|..|.... ... .+|++++....
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~~~------------~~~v~~~~~~~~ 142 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI-QGK------------DLLIAYYDVDYE 142 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-SSS------------SEEEEEECCBTT
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhh-cCC------------CeEEEEeecchh
Confidence 99996 34677899 99999999999999999999999999997663 221 26777764321
Q ss_pred ---hhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccC--CceEEEEEeCccCchhhhhhhhhhheeeecc---
Q 010886 407 ---PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRN--KRLTFAWLDGEAQDVSFIMLISLFYVDFFLH--- 478 (498)
Q Consensus 407 ---~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~--- 478 (498)
+..+.+++.++++|+ +|++ +.+.|+|+|+..+.+ .+++|.-
T Consensus 143 ~~~~~~~~~~~~~~~vA~----------------------~~~~k~~~~~F~~~d~~~~~~---------~~~~fgl~~~ 191 (252)
T 2h8l_A 143 KNAKGSNYWRNRVMMVAK----------------------KFLDAGHKLNFAVASRKTFSH---------ELSDFGLEST 191 (252)
T ss_dssp TBHHHHHHHHHHHHHHHH----------------------HHHHTTCCCEEEEEETTTTHH---------HHGGGTCCCC
T ss_pred hcchhHHHHHHHHHHHHH----------------------HccccCceEEEEEEchHHHHH---------HHHHcCCCCc
Confidence 234567888888888 6664 359999999998887 5666665
Q ss_pred -CCceeeeeeccccee
Q 010886 479 -SDLFVLWLLFPSMSM 493 (498)
Q Consensus 479 -~~~~~~~~~~~~~~~ 493 (498)
.++|.++|.|..+.+
T Consensus 192 ~~~~P~v~i~~~~~~k 207 (252)
T 2h8l_A 192 AGEIPVVAIRTAKGEK 207 (252)
T ss_dssp SCSSCEEEEECTTSCE
T ss_pred cCCCCEEEEEeCcCcE
Confidence 489999999875544
No 89
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.63 E-value=1.2e-16 Score=134.70 Aligned_cols=101 Identities=16% Similarity=0.244 Sum_probs=88.5
Q ss_pred EEEe-cCCCCcccccC----CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~L-t~~nF~~~v~~----~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|.++ +.++|++.+.+ +++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++ .++++++
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~----- 75 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA---AVAEAAG----- 75 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH---HHHHHHT-----
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH---HHHHHcC-----
Confidence 5677 45889998865 899999999999999999999999999999878999999999654 4999999
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...+.|. +.++|.+|+.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 76 -ITAMPTFHVYKDGVK----ADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp -CCBSSEEEEEETTEE----EEEEESC-CHHHHHHHHHHH
T ss_pred -CCcccEEEEEECCeE----EEEEcCC-CHHHHHHHHHHH
Confidence 999999999998865 2467888 999999999876
No 90
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.62 E-value=1.7e-16 Score=134.17 Aligned_cols=99 Identities=15% Similarity=0.267 Sum_probs=86.5
Q ss_pred EEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeee
Q 010886 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (498)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~P 218 (498)
...+.++|++.+.++++++|.||++||++|+++.|.|+++++.+.+ +.+..||+++++. ++++++ |+++|
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~---l~~~~~------v~~~P 79 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGD---VAQKNE------VSAMP 79 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCSSS
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHcC------CCccC
Confidence 3466788999999999999999999999999999999999999866 8899999996654 999999 99999
Q ss_pred EEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++|.+|+. ...+.|. +.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 80 TLLLFKNGKE----VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEECCEE----EEEEeCC-CHHHHHHHHHhh
Confidence 9999998865 3467788 679999998765
No 91
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.62 E-value=1.9e-16 Score=131.89 Aligned_cols=96 Identities=13% Similarity=0.220 Sum_probs=84.6
Q ss_pred cCCCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeE
Q 010886 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (498)
Q Consensus 142 t~~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PT 219 (498)
+.++|++.++ ++++++|.||+|||++|+.+.|.|+++++.+.+ +.++.||+++++ .++++++ |+++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~------v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASESE------VKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCH---HHHHHTT------CCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhH---HHHHHcC------CCcCcE
Confidence 4567888886 799999999999999999999999999999977 899999999665 4999999 999999
Q ss_pred EEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 220 l~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++|.+|+. ...|.|. +.++|.+|+.+.
T Consensus 77 ~~~~~~g~~----~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 77 FQFFKKGQK----VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 999988865 3467888 999999999875
No 92
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.61 E-value=3.1e-16 Score=133.87 Aligned_cols=99 Identities=16% Similarity=0.243 Sum_probs=86.8
Q ss_pred EEEecC-CCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.++++ ++|++.++ ++++++|.||++||++|+++.|.++++++.+ .+.++.||+++++ .++++++ |
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~---~~~~~~~------v 83 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE---ETARKYN------I 83 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH---HHHHHTT------C
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH---HHHHHcC------C
Confidence 678988 89999886 7999999999999999999999999999887 6889999999664 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|.. ...+.| .+.+.|.+++.+.
T Consensus 84 ~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 84 SAMPTFIAIKNGEK----VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp CSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred CccceEEEEeCCcE----EEEEeC-CCHHHHHHHHHHh
Confidence 99999999988865 246778 6889999998764
No 93
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.60 E-value=7.5e-17 Score=137.72 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=60.8
Q ss_pred ccccccccCCCCCCCH--HHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccccCC
Q 010886 36 PPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~--~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~ 101 (498)
..|+|+||||+++++. ++||+|||+|++++|||+++ ..++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~-~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGG-DEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCC-TTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCc-cHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4589999999999999 99999999999999999986 47899999999999999999999999874
No 94
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.60 E-value=2.8e-16 Score=134.84 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=88.5
Q ss_pred EEEecCCCCccccc----CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~Lt~~nF~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
+..++.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.||+++++ .++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~------ 84 (122)
T 2vlu_A 15 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK---PIAEQFS------ 84 (122)
T ss_dssp EEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------
T ss_pred eeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH---HHHHHcC------
Confidence 56678899999884 589999999999999999999999999999887 899999999665 4999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...|.|.. .+.|.+|+.+.
T Consensus 85 v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 85 VEAMPTFLFMKEGDV----KDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp CCSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CCcccEEEEEeCCEE----EEEEeCcC-HHHHHHHHHHH
Confidence 999999999988865 34688999 99999999876
No 95
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.60 E-value=2.3e-16 Score=133.75 Aligned_cols=100 Identities=11% Similarity=0.244 Sum_probs=88.6
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
...++.++|++.++++++++|.||++||++|+++.|.++++++.+.+ +.++.||+++++ .++++++ |.++
T Consensus 11 ~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~---~~~~~~~------v~~~ 80 (112)
T 1syr_A 11 KIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVS---EVTEKEN------ITSM 80 (112)
T ss_dssp EEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTH---HHHHHTT------CCSS
T ss_pred EEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCH---HHHHHcC------CCcc
Confidence 36789999999999999999999999999999999999999999875 899999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
||+++|++|.. ...+.|. +.+.|.+|+.+.
T Consensus 81 Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 81 PTFKVYKNGSS----VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTEE----EEEEESC-CHHHHHHHHHTT
T ss_pred cEEEEEECCcE----EEEEeCC-CHHHHHHHHHHh
Confidence 99999998865 2467898 999999998764
No 96
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.60 E-value=5.3e-16 Score=133.66 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=87.1
Q ss_pred EEEecCCCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc-cchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~-~~~~~~~l~~~~~~~~~~~I 214 (498)
|..++.++|++.+. ++++++|.||++||++|+++.|.++++++.+.+ +.+..||++ +++ .++++++ |
T Consensus 20 v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~~------v 89 (124)
T 1faa_A 20 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENK---TLAKELG------I 89 (124)
T ss_dssp EEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTH---HHHHHHC------C
T ss_pred eEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchH---HHHHHcC------C
Confidence 78899999999885 789999999999999999999999999999875 789999998 443 4899998 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|+. ...+.|.. .++|.+++.+.
T Consensus 90 ~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 90 RVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 99999999998865 24577876 89999998765
No 97
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.60 E-value=8.7e-16 Score=132.80 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=88.4
Q ss_pred EEEecCCCCc-----ccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEE--cccchhhhHHHHhCCCCc
Q 010886 138 FNVVTSEDFP-----SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--LGDIRLATHLAERKPIGQ 210 (498)
Q Consensus 138 V~~Lt~~nF~-----~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vd--c~~~~~~~~l~~~~~~~~ 210 (498)
+..++..+|+ ....++++++|.||++||++|+.+.|.++++++.+++.+.+..|| ++++ ..++++++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~---~~~~~~~~--- 79 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKN---IDLAYKYD--- 79 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHH---HHHHHHTT---
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCch---HHHHHHcC---
Confidence 4567777887 556788999999999999999999999999999998779999999 8844 45999999
Q ss_pred ccceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|. +|.. ...+.|.++.+.|.+|+.+.
T Consensus 80 ---v~~~Pt~~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 80 ---ANIVPTTVFLDKEGNK----FYVHQGLMRKNNIETILNSL 115 (126)
T ss_dssp ---CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHHH
T ss_pred ---CcceeEEEEECCCCCE----EEEecCCCCHHHHHHHHHHH
Confidence 99999999999 6654 34678999999999999987
No 98
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.60 E-value=4.3e-16 Score=131.93 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=86.6
Q ss_pred EEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeee
Q 010886 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (498)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~P 218 (498)
..++.++| +.+.++++++|.||+|||++|+.+.|.++++++.+. .+.++.||+++++ +++++++ |+++|
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~---~l~~~~~------v~~~P 74 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARP---ELMKELG------FERVP 74 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCH---HHHHHTT------CCSSC
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCH---HHHHHcC------CcccC
Confidence 46788999 777788999999999999999999999999998875 5789999999554 4999999 99999
Q ss_pred EEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++|++|+. ...+.|..+.+.|.+++.+.
T Consensus 75 t~~~~~~G~~----v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 75 TLVFIRDGKV----AKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp EEEEEESSSE----EEEEESCCCHHHHHHHHHTC
T ss_pred EEEEEECCEE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999988865 34688999999999999775
No 99
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.6e-16 Score=128.25 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=56.7
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhc
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRN 95 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~ 95 (498)
..|||++|||+++++.++||+|||+|+++||||+++ ++.++|++|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 579999999999999999999999999999999985 688899999999999999999875
No 100
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.59 E-value=3.2e-16 Score=140.68 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=87.6
Q ss_pred ecCCCCcccc--cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeee
Q 010886 141 VTSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (498)
Q Consensus 141 Lt~~nF~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~P 218 (498)
.+.++|++.+ +++++++|.||||||++|+.+.|.++++++++.+.+.+++||+++++. ++++++ |+++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~---l~~~~~------v~~~P 79 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV---YTQYFD------ISYIP 79 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH---HHHHTT------CCSSS
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH---HHHHcC------CCccC
Confidence 3567898888 569999999999999999999999999999998889999999996654 999999 99999
Q ss_pred EEEEeCCCCcC-----CCCcccccC-CCCHHHHHHHHHHH
Q 010886 219 SLVAFPPGCKS-----SDCMTRFEG-ELSVDAVTDWFATA 252 (498)
Q Consensus 219 Tl~~f~~g~~~-----~~~~~~Y~G-~r~~~~Iv~fv~k~ 252 (498)
|+++|++|+.. ......+.| ..+.++|.+++.+.
T Consensus 80 t~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 80 STVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred eEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 99999998651 000046779 89999999999775
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.38 E-value=8.4e-17 Score=133.57 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=89.4
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+|+.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.||++++. .++++++ |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP---NTAAQYG------IRS 73 (106)
Confidence 5789999999766 77899999999999999999999999999999878899999999654 4888888 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 74 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 74 IPTLLLFKNGQV----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999999988765 34788999999999998754
No 102
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.59 E-value=6.7e-16 Score=128.09 Aligned_cols=99 Identities=12% Similarity=0.262 Sum_probs=85.7
Q ss_pred EEecC-CCCccccc--CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 139 NVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 139 ~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
.++++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.++.||+++++ .++++++ |+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~------v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE---EAAAKYS------VT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTT------CC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH---HHHHHcC------Cc
Confidence 46777 88988886 79999999999999999999999999999886 5899999999665 4999999 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|.+|.. ...+.| .+.++|.+|+.+.
T Consensus 72 ~~Pt~~~~~~g~~----~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 72 AMPTFVFIKDGKE----VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp SSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEeC-CCHHHHHHHHHhh
Confidence 9999999998865 246778 6899999998764
No 103
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.59 E-value=3.6e-16 Score=125.00 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=59.5
Q ss_pred ccccccccCCCCC--CCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccccCCc
Q 010886 36 PPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (498)
Q Consensus 36 ~~d~y~ilgv~~~--a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~ 102 (498)
..++|++|||+++ ++.++||+|||+|++++|||++ ++.++|++|++||++|+|+.+|.. +.||..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~-~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CCHHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-CCHHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 3579999999999 9999999999999999999997 578999999999999999999988 567765
No 104
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.58 E-value=7.7e-17 Score=146.99 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=58.6
Q ss_pred ccccccccCCCCCCC--HHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccccCC
Q 010886 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~--~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~ 101 (498)
..|+|++|||+++|+ .++||+|||++++++|||+++ +.++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~-~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGG-DEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC----CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCC-CHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 579999999999999 599999999999999999985 46899999999999999999999999985
No 105
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.58 E-value=4.7e-16 Score=132.82 Aligned_cols=98 Identities=11% Similarity=0.173 Sum_probs=84.2
Q ss_pred EEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeee
Q 010886 139 NVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (498)
Q Consensus 139 ~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~ 217 (498)
.++++ ++|++.++++++++|.||+|||++|+.+.|.++++++.+.+ +.++.||+++++ .++++++ |+++
T Consensus 15 ~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~---~l~~~~~------v~~~ 84 (114)
T 2oe3_A 15 TKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESP---DIAKECE------VTAM 84 (114)
T ss_dssp CBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------CCSB
T ss_pred eecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHCC------CCcc
Confidence 44555 55777788899999999999999999999999999999987 999999999665 4999999 9999
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
||+++|++|.. ...+.|.. .+.|.+|+.+
T Consensus 85 Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 85 PTFVLGKDGQL----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTEE----EEEEESSC-HHHHHHHHHT
T ss_pred cEEEEEeCCeE----EEEEeCCC-HHHHHHHHHh
Confidence 99999988865 24688988 8999998864
No 106
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.58 E-value=1.5e-16 Score=136.22 Aligned_cols=101 Identities=13% Similarity=0.169 Sum_probs=83.3
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc---hhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~---~~~~~l~~~~~~~~~~~I 214 (498)
+..++.++|+..+.++++++|.||||||++|+++.|.++++++.+... +..+|+++. .....++++++ |
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~------i 85 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLNDLQAFRSRYG------I 85 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHHHHHHHHHHT------C
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHHHHHHHHHcC------C
Confidence 467888999998988899999999999999999999999999988644 445555532 12346888888 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~ 250 (498)
+++||+++|.+|.. ...+.|.++.++|.+|+.
T Consensus 86 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQI----NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEE----EEECCTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEE----EEEecCCCCHHHHHHHhh
Confidence 99999999998865 347889999999999974
No 107
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.57 E-value=2.7e-14 Score=136.88 Aligned_cols=177 Identities=19% Similarity=0.273 Sum_probs=130.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCC
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPG 341 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~ 341 (498)
+++.+.+++|+...+ .++|.+|.+.++...+.+..+|..+ .++.|+.+. .++++++++++. |+|++|++.+
T Consensus 14 l~s~~~~~~~l~~~~--v~vVgff~~~~~~~~~~f~~~A~~l-~~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~~ 84 (227)
T 4f9z_D 14 LTDVPAAMEFIAATE--VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNITG-NTICLFRLVD 84 (227)
T ss_dssp CCSHHHHHHHHHTSS--EEEEEECSCSCSTHHHHHHHHTTTC-TTSEEEEEC-----CHHHHHHTTCCS-SEEEEEETTT
T ss_pred eCCHHHHHHHHhcCC--eEEEEEecCCCchhHHHHHHHHHhC-CCceEEEEC-----CHHHHHHcCCCC-CeEEEEEecC
Confidence 556555788886432 3455566655555567788888888 478888853 356999999986 9999999877
Q ss_pred CceeeecC----CCChhHHHHHHHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeC-CCchhhHHHHHHH
Q 010886 342 VKPVVYYG----SFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAG-RLSPELNKMRETI 416 (498)
Q Consensus 342 ~~~~~y~g----~~~~~~L~~fi~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~-~~~~~~~~~~~~l 416 (498)
+.+..|.| +++.+.|.+||+.+.+|++++++..|.... +.. .. .++++++. ...++.+++++.+
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~-~~~-----~~-----~~~~l~f~~~~~~~~~~~~~~~ 153 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGL-FNS-----VI-----QIHLLLIMNKASPEYEENMHRY 153 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHH-HHS-----SC-----CEEEEEEECTTSTTHHHHHHHH
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHH-hcc-----CC-----ceEEEEEEcCCcchHHHHHHHH
Confidence 77888874 789999999999999999999999886442 110 01 14444453 3445678888999
Q ss_pred HHHHHhhcccccccccccCCCchHHHHhccCCceEEEEEeCcc--CchhhhhhhhhhheeeeccC--Cceeeeeeccc
Q 010886 417 RRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEA--QDVSFIMLISLFYVDFFLHS--DLFVLWLLFPS 490 (498)
Q Consensus 417 ~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~wvd~~~--q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 490 (498)
+++|+ +|+++ +.|+|+|+.. ..+ .+++|..+ ++|.++|++..
T Consensus 154 ~~vAk----------------------~~k~~-i~F~~vd~~~~~~~~---------~l~~fgl~~~~~P~~~i~~~~ 199 (227)
T 4f9z_D 154 QKAAK----------------------LFQGK-ILFILVDSGMKENGK---------VISFFKLKESQLPALAIYQTL 199 (227)
T ss_dssp HHHHH----------------------HTTTT-CEEEEEETTSGGGHH---------HHHHTTCCGGGCSEEEEEESS
T ss_pred HHHHH----------------------HhhCC-EEEEEeCCccHhHHH---------HHHHcCCCcccCCEEEEEECC
Confidence 99888 78886 9999999963 444 44556665 89999999865
No 108
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.57 E-value=1.1e-15 Score=131.70 Aligned_cols=101 Identities=17% Similarity=0.273 Sum_probs=88.7
Q ss_pred EEEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
+..+++ ++|++.++++++++|.||++||++|+.+.|.++++++.+.+. +.++.||+++++ .++++++ |.
T Consensus 17 ~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~---~~~~~~~------v~ 87 (121)
T 2j23_A 17 VQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS---QIAQEVG------IR 87 (121)
T ss_dssp EEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH---HHHHHHT------CC
T ss_pred eEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH---HHHHHcC------CC
Confidence 456766 889999988999999999999999999999999999998876 899999999665 4999998 99
Q ss_pred eeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++|.+|.. ...+.|. +.++|.+|+.+.
T Consensus 88 ~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 88 AMPTFVFFKNGQK----IDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp SSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred cccEEEEEECCeE----EeeEcCC-CHHHHHHHHHHh
Confidence 9999999998865 2467888 999999999876
No 109
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.57 E-value=3.8e-14 Score=138.01 Aligned_cols=186 Identities=15% Similarity=0.052 Sum_probs=135.7
Q ss_pred cCCcccccccchhhhhhhhh-cCCCcEEEEEEecCCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCE
Q 010886 255 KLPRIFYYTKESMGKNFLAK-TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPA 333 (498)
Q Consensus 255 ~~P~~~~it~~~~~~~fl~~-~~~~~~~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pt 333 (498)
.+|++..+++.+.+++|++. .+ .++|.+|.+.+......+..+|..+++++.|+.+. +++++++++++. |+
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~--v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~-----~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDD--VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTF-----STEIAKFLKVSL-GK 75 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSS--CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEEC-----CHHHHHHHTCCS-SE
T ss_pred CCCCceecCCHHHHHHHHhcCCC--eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEEC-----cHHHHHHcCCCC-Ce
Confidence 47887778776668888875 33 34555665544334556677888899999999974 356889999976 99
Q ss_pred EEEEeC------CCCceeeec--CCCChhHHHHHHHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCCC
Q 010886 334 IVFLKD------PGVKPVVYY--GSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL 405 (498)
Q Consensus 334 i~lfk~------~~~~~~~y~--g~~~~~~L~~fi~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~ 405 (498)
|++|++ .++.++.|+ |.++.++|.+||+.+.+|++++++.+|+.... . ++ .+|++++..+
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~-------~~----~l~~~~~~~d 143 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY-S-------KR----PLVVVYYSVD 143 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS-C-------SS----SEEEEEECCC
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh-c-------cC----ccEEEEEecc
Confidence 999996 356678898 47899999999999999999999999976522 1 11 3777766422
Q ss_pred -----chhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCCceEEEEEeCccCchhhhhhhhhhheeeeccC-
Q 010886 406 -----SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDVSFIMLISLFYVDFFLHS- 479 (498)
Q Consensus 406 -----~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~- 479 (498)
.++.+.+++.++++|+ +|+ .+.|+|+|++...+ .+++|.-.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vAk----------------------~~k--ki~F~~~d~~~~~~---------~l~~fgl~~ 190 (250)
T 3ec3_A 144 FSFDYRTATQFWRNKVLEVAK----------------------DFP--EYTFAIADEEDYAT---------EVKDLGLSE 190 (250)
T ss_dssp CSTTTHHHHHHHHHHHHHHHT----------------------TCT--TSEEEEEETTTTHH---------HHHHTTCSS
T ss_pred cccccchhHHHHHHHHHHHHH----------------------hhc--ceeEEEEcHHHHHH---------HHHHcCCCc
Confidence 3345678888888888 888 49999999988777 44555543
Q ss_pred -C-ceeeeeeccccee
Q 010886 480 -D-LFVLWLLFPSMSM 493 (498)
Q Consensus 480 -~-~~~~~~~~~~~~~ 493 (498)
+ .|.+++++..+.+
T Consensus 191 ~~~~p~~~~~~~~~~k 206 (250)
T 3ec3_A 191 SGGDVNAAILDESGKK 206 (250)
T ss_dssp CSCSCEEEEECTTSCE
T ss_pred cCCCcEEEEEcCCCce
Confidence 3 4688888855433
No 110
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.57 E-value=4e-16 Score=137.27 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=88.7
Q ss_pred eEEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc------hhhhHHHHhCCCCc
Q 010886 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI------RLATHLAERKPIGQ 210 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~------~~~~~l~~~~~~~~ 210 (498)
.|..+|.++|++.+++ +++|.|||+||++|+.+.|.|+++++.++ +.++.||+++. .....++++++
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~--- 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG--- 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT---
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC---
Confidence 3788999999999976 99999999999999999999999999886 89999999321 13455899998
Q ss_pred ccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|.+|+. ...+.|..+.+.+..++++.
T Consensus 90 ---v~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 ---VEGTPTLVFYKEGRI----VDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ---CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ---CceeCeEEEEcCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999999998875 34788999999999999887
No 111
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.57 E-value=9e-16 Score=138.83 Aligned_cols=68 Identities=22% Similarity=0.434 Sum_probs=61.7
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC---------hHHHHHHHHhhhhHcCChhhhhcccccCC
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---------STADFLKIQYAYELLTDPLWKRNYDVYGI 101 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~---------~~~~f~~i~~ay~~L~d~~~r~~yd~~g~ 101 (498)
....|||++|||+++++.++||+|||+|++++|||+++. +.++|.+|++||++|+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 346799999999999999999999999999999999863 24789999999999999999999998754
No 112
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.56 E-value=1.5e-15 Score=136.43 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=86.7
Q ss_pred EEEecC-CCCcccccC--CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|..++. ++|++.+.+ +++++|.||+|||++|+++.|.|+++++.+. .+.++.|||++++ .+|++++ |
T Consensus 14 v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~---~l~~~~~------v 83 (153)
T 2wz9_A 14 VEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVP---EVSEKYE------I 83 (153)
T ss_dssp SEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT------C
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCH---HHHHHcC------C
Confidence 677874 889988866 8999999999999999999999999999874 5899999999665 4999999 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+++||+++|.+|.. ...+.| .+.++|.+|+.+.+
T Consensus 84 ~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 84 SSVPTFLFFKNSQK----IDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp CSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHHS
T ss_pred CCCCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHHh
Confidence 99999999998765 235667 57889999999874
No 113
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.55 E-value=2.4e-15 Score=132.23 Aligned_cols=105 Identities=10% Similarity=0.162 Sum_probs=88.4
Q ss_pred EEEec-CCCCcccc----cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVVT-SEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~Lt-~~nF~~~v----~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
+.+++ .++|++.+ .++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++ .++++++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~---~~~~~~~----- 96 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELS---DFSASWE----- 96 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT-----
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccH---HHHHHcC-----
Confidence 45564 68899888 358999999999999999999999999999984 4899999999664 4999999
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcCC
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~P 257 (498)
|+++||+++|++|.. ...+.|. +.++|.+++.+.+..+|
T Consensus 97 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 97 -IKATPTFFFLRDGQQ----VDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp -CCEESEEEEEETTEE----EEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred -CCcccEEEEEcCCeE----EEEEeCC-CHHHHHHHHHHHhccCC
Confidence 999999999988865 2457788 89999999998855444
No 114
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.55 E-value=1.8e-15 Score=130.51 Aligned_cols=98 Identities=11% Similarity=0.177 Sum_probs=79.3
Q ss_pred EEEecCCCCccccc-CCC--cEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVVTSEDFPSIFH-DSK--PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~Lt~~nF~~~v~-~~~--~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|.++|.++|.+.|. +.+ +++|.||||||++|+.+.|.++++|+++. .++|.+||+++. +++++ |
T Consensus 5 v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~------~~~~~------v 71 (118)
T 3evi_A 5 LREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC------IQHYH------D 71 (118)
T ss_dssp CEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT------STTCC------G
T ss_pred eEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh------HHHCC------C
Confidence 67899999998773 333 89999999999999999999999999985 489999999932 46666 9
Q ss_pred eeeeEEEEeCCCCcCCCCcccccCC-------CCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~g~~~~~~~~~Y~G~-------r~~~~Iv~fv~k~ 252 (498)
+++||+++|++|... ..+.|. .+.++|-.++.+.
T Consensus 72 ~~~PT~~~fk~G~~v----~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 72 NCLPTIFVYKNGQIE----AKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GGCSEEEEEETTEEE----EEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCEEEEEECCEEE----EEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999763 345553 3677777777554
No 115
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.54 E-value=2.9e-15 Score=142.66 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=87.6
Q ss_pred EEecCCCCcccccCCCcE-EEEEecCCCCCCCCChHHHHHHHHHhh----ccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 139 NVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~-lV~FYapwC~~C~~l~p~~~~~A~~l~----~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
..|+.++|+.+.+.++.+ +|.||||||++|+++.|.|+++++.+. +.+.++.|||++++ .+|++++
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------ 189 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP---EWADQYN------ 189 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH---HHHHHTT------
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH---HHHHhCC------
Confidence 457777887776666666 999999999999999999999999998 57899999999655 4999999
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 190 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED----RVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCSSCEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEeCCce----eEEEcCCCCHHHHHHHHHHh
Confidence 999999999998865 34789999999999999875
No 116
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.54 E-value=2.4e-15 Score=130.37 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=85.8
Q ss_pred EEEe-cCCCCccccc----CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|.+| +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.+..||+++++ .++++++
T Consensus 18 v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~----- 88 (124)
T 1xfl_A 18 VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK---SVASDWA----- 88 (124)
T ss_dssp CEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH---HHHHHTT-----
T ss_pred EEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH---HHHHHcC-----
Confidence 5677 5688998884 48999999999999999999999999999986 5899999999665 4999999
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...+.| .+.++|.+++.+.
T Consensus 89 -v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 -IQAMPTFMFLKEGKI----LDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp -CCSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred -CCccCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHh
Confidence 999999999988865 235678 5899999999875
No 117
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.53 E-value=5.5e-15 Score=158.03 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=89.1
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhh-c--cceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-G--IANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-~--~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
.|..|+.++|+..+ +++++++|.||||||+||+.+.|.|+++|+.++ + .+.+++|||+.+. +.. ++
T Consensus 359 ~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~----~~~-~~----- 428 (504)
T 2b5e_A 359 SVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND----VRG-VV----- 428 (504)
T ss_dssp SEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC----CSS-CC-----
T ss_pred cceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc----ccc-CC-----
Confidence 47899999999987 678999999999999999999999999999987 3 5799999999664 223 66
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|... ....|.|.++.++|++|+.+.
T Consensus 429 -v~~~Pt~~~~~~G~~~--~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 429 -IEGYPTIVLYPGGKKS--ESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp -CSSSSEEEEECCTTSC--CCCBCCSCCCHHHHHHHHHHH
T ss_pred -ceecCeEEEEeCCcee--cceEecCCCCHHHHHHHHHhc
Confidence 9999999999988641 135899999999999999987
No 118
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.53 E-value=2.4e-15 Score=133.87 Aligned_cols=102 Identities=10% Similarity=0.057 Sum_probs=81.6
Q ss_pred cCCCCcccc-c-CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeE
Q 010886 142 TSEDFPSIF-H-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (498)
Q Consensus 142 t~~nF~~~v-~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PT 219 (498)
+.++|++.+ + ++++++|.||||||++|+.+.|.++++++++++.+.+++||+++++. ++++++ |+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---~~~~~~------i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD---FNKMYE------LYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTSSC------SCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH---HHHHcC------CCCCCE
Confidence 456788766 3 68999999999999999999999999999998889999999997654 888888 999999
Q ss_pred EEEeCCCCcCCC-----CcccccCCCC-HHHHHHHHHHH
Q 010886 220 LVAFPPGCKSSD-----CMTRFEGELS-VDAVTDWFATA 252 (498)
Q Consensus 220 l~~f~~g~~~~~-----~~~~Y~G~r~-~~~Iv~fv~k~ 252 (498)
+++|.+|+.... ......|..+ .+++.+++.+.
T Consensus 81 ~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 999998865300 0002446554 88888888775
No 119
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.52 E-value=1.1e-15 Score=160.54 Aligned_cols=104 Identities=21% Similarity=0.361 Sum_probs=87.3
Q ss_pred eEEEecCCCCcccccC--CCcEEEEEecCCCCCCCCChHHHHHHHHHhh---c-----cceEEEEEcccchhhhHHHHhC
Q 010886 137 AFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---G-----IANTGMVELGDIRLATHLAERK 206 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~---~-----~i~va~Vdc~~~~~~~~l~~~~ 206 (498)
.|.+||.++|++.+.+ +++++|+||||||++|+.+.|.|+++++.+. + .+.|++|||++++ ++|++|
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y 100 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKY 100 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHT
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHc
Confidence 3789999999999854 4799999999999999999999999999997 3 5899999999664 499999
Q ss_pred CCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 207 PIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 207 ~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+ |+++||+++|.+|+.. ....|.|.++.+.| .|+.+.
T Consensus 101 ~------V~~~PTlilf~~gg~~--~~~~y~G~r~~e~L-~fI~k~ 137 (470)
T 3qcp_A 101 D------INFVPRLFFFYPRDSC--RSNEECGTSSLEHV-AFENSH 137 (470)
T ss_dssp T------CCSSCEEEEEEESSCC--CTTSCCCCCCEEEE-ECSCTT
T ss_pred C------CCccCeEEEEECCCce--EEEEeeCCCCHHHH-HHHHHh
Confidence 9 9999999999766431 24589999888776 666544
No 120
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.52 E-value=4.6e-15 Score=126.01 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=86.0
Q ss_pred EEEe-cCCCCcccccC----CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~L-t~~nF~~~v~~----~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|..+ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++ .++++++
T Consensus 8 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~----- 78 (118)
T 2vm1_A 8 VIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK---DVAEAYN----- 78 (118)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT-----
T ss_pred eEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH---HHHHHcC-----
Confidence 5667 46889988844 8999999999999999999999999999986 5889999999654 4999999
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
|+++||+++|++|.. ...+.| .+.++|.+++.+.+
T Consensus 79 -v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 79 -VEAMPTFLFIKDGEK----VDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp -CCSBSEEEEEETTEE----EEEEES-CCHHHHHHHHHHHH
T ss_pred -CCcCcEEEEEeCCeE----EEEecC-CCHHHHHHHHHHHh
Confidence 999999999988865 235677 58899999998873
No 121
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=5.2e-15 Score=130.29 Aligned_cols=99 Identities=10% Similarity=0.165 Sum_probs=82.2
Q ss_pred eEEEecCCCCcccccC---CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~~nF~~~v~~---~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|.+||.++|++.|.+ +++++|.||||||++|+.+.|.|+++|+.+. .+.+++||++++. ++++
T Consensus 11 ~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------~~~~------ 77 (135)
T 2dbc_A 11 ELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------EHYH------ 77 (135)
T ss_dssp SCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------SSCC------
T ss_pred ceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------ccCC------
Confidence 3678899999998843 3689999999999999999999999999874 4899999999542 4556
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCC-------CHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGEL-------SVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r-------~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|... ..+.|.. +.+.|..++.+.
T Consensus 78 i~~~Pt~~~~~~G~~v----~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 78 DNCLPTIFVYKNGQIE----GKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp SSCCSEEEEESSSSCS----EEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCEEE----EEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999999999988753 4566664 788999998876
No 122
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.52 E-value=2.1e-15 Score=122.76 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=56.5
Q ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC----hHHHHHHHHhhhhHcCChhhhhcc
Q 010886 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNY 96 (498)
Q Consensus 34 ~~~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~ay~~L~d~~~r~~y 96 (498)
....++|+||||+++|+.+|||+|||+|+++||||++++ +.++|++|++||++|+|...|..+
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 346789999999999999999999999999999999985 468899999999999998877443
No 123
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.52 E-value=1e-15 Score=154.53 Aligned_cols=67 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--ChHHHHHHHHhhhhHcCChhhhhcccccCCc
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~ay~~L~d~~~r~~yd~~g~~ 102 (498)
..|||++|||+++|+.+|||+|||+|+++||||+++ .+.++|++|++||++|+||++|+.||+++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 479999999999999999999999999999999876 4678899999999999999999999998544
No 124
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=5.7e-15 Score=129.61 Aligned_cols=100 Identities=10% Similarity=0.162 Sum_probs=84.2
Q ss_pred eEEEecC-CCCcccccC--CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 137 AFNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
.|.++++ ++|+..+++ +++++|.|||+||++|+.+.|.|+++++.+ .+.++.||+++++ .++++|+
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~---~l~~~~~------ 89 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHP---KLNDQHN------ 89 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCH---HHHHHTT------
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchH---HHHHhcC------
Confidence 3778876 788888854 579999999999999999999999998876 3789999999665 4999999
Q ss_pred eeeeeEEEEeC--CCC--cCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFP--PGC--KSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~--~g~--~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|+ +|. . ...+.|. +.++|.+++.+.
T Consensus 90 v~~~Pt~~~~~~~~g~g~~----~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 IKALPTFEFYFNLNNEWVL----VHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp CCSSSEEEEEEEETTEEEE----EEEEESC-CHHHHHHHHHHH
T ss_pred CCCCCEEEEEEecCCCeEE----EEEEcCC-CHHHHHHHHHHH
Confidence 99999999996 775 2 2357787 899999999887
No 125
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.50 E-value=5.7e-15 Score=135.85 Aligned_cols=65 Identities=14% Similarity=0.262 Sum_probs=58.1
Q ss_pred CccccccccCCCCCCC--HHHHHHHHHHHHhhcCCCCCCC--------hHHHHHHHHhhhhHcCChhhhhccccc
Q 010886 35 FPPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDVY 99 (498)
Q Consensus 35 ~~~d~y~ilgv~~~a~--~~~ik~ayr~l~~~~HPD~~~~--------~~~~f~~i~~ay~~L~d~~~r~~yd~~ 99 (498)
...|||++|||+++++ .++||+|||+++++||||++++ +.++|..|++||++|+||.+|..||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4679999999999998 9999999999999999999763 346799999999999999999999963
No 126
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.49 E-value=4.7e-15 Score=124.97 Aligned_cols=100 Identities=13% Similarity=0.202 Sum_probs=85.1
Q ss_pred EEEe-cCCCCccccc----CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.+..||+++++ .++++++
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~~~~~~~----- 76 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELK---AVAEEWN----- 76 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCH---HHHHHHH-----
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccH---HHHHhCC-----
Confidence 5667 5688998884 48999999999999999999999999999886 5899999999654 4899988
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...+.| .+.++|.+++.+.
T Consensus 77 -v~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 77 -VEAMPTFIFLKDGKL----VDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp -CSSTTEEEEEETTEE----EEEEEC-CCTTHHHHHHHHH
T ss_pred -CCcccEEEEEeCCEE----EEEEec-CCHHHHHHHHHHh
Confidence 999999999988865 235667 6889999999876
No 127
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.48 E-value=7.7e-15 Score=125.91 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=83.3
Q ss_pred EEEe--cCCCCcccc-cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce
Q 010886 138 FNVV--TSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (498)
Q Consensus 138 V~~L--t~~nF~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I 214 (498)
|..+ +.++|++.+ +++++++|.||++||++|+.+.|.++++++.+ +.+.++.||+++++ .++++++ |
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~---~~~~~~~------i 74 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNG---NAADAYG------V 74 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCH---HHHHHTT------C
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCH---HHHHhcC------C
Confidence 4556 567788555 67899999999999999999999999999998 67899999999665 4999999 9
Q ss_pred eeeeEEEEeCC----CCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 215 RGLPSLVAFPP----GCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f~~----g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+++||+++|.+ |.. ...+.|..+ ++|.+.+.+.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~----~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKT----LDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp CSSSEEEEEEEETTEEEE----EEEEESCCH-HHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcceE----EEeecCCCH-HHHHHHHHHh
Confidence 99999999987 654 245778775 4588888876
No 128
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.6e-14 Score=125.25 Aligned_cols=103 Identities=12% Similarity=0.159 Sum_probs=86.9
Q ss_pred EEecCCCCcccc----cCCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcc
Q 010886 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (498)
Q Consensus 139 ~~Lt~~nF~~~v----~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~ 211 (498)
..++..+|++.+ .++++++|.||++||++|+.+.|.+ +++++.+++.+.++.||++++. ...++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~---- 83 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYG---- 83 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTT----
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcC----
Confidence 457888998887 3689999999999999999999999 7888887777889999998422 245999999
Q ss_pred cceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||+++| ++|.. ...+.|..+.+.|.+|+.+.
T Consensus 84 --v~~~Pt~~~~d~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 84 --VHAYPTLLFINSSGEV----VYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp --CCSSCEEEEECTTSCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999999 56754 34678999999999999887
No 129
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.48 E-value=1.2e-14 Score=118.68 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=48.7
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC------hHHHHHHHHhhhhHcCC
Q 010886 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTD 89 (498)
Q Consensus 37 ~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~ay~~L~d 89 (498)
.++|++|||++.|+.++||+|||+++++||||++++ +.++|.+|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999874 45689999999999964
No 130
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.47 E-value=1.1e-14 Score=134.48 Aligned_cols=72 Identities=18% Similarity=0.389 Sum_probs=63.2
Q ss_pred cCCCCcccccccc------CCCC-CCCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhhcccc---cC
Q 010886 31 LPRSFPPSHYDAL------GIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDV---YG 100 (498)
Q Consensus 31 ~~~~~~~d~y~il------gv~~-~a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~~yd~---~g 100 (498)
..++...|||++| |+.+ +++..+||+|||+|++++|||+++++.++|..|++||++|+||.+|..||. +|
T Consensus 5 ~~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~g 84 (181)
T 3uo3_A 5 VQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKLLRN 84 (181)
T ss_dssp --CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHHHHC
T ss_pred cCCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHHHhC
Confidence 3556688999999 4655 899999999999999999999998788899999999999999999999997 55
Q ss_pred Cc
Q 010886 101 ID 102 (498)
Q Consensus 101 ~~ 102 (498)
..
T Consensus 85 ~~ 86 (181)
T 3uo3_A 85 ID 86 (181)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 131
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.47 E-value=6.6e-15 Score=127.41 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=85.2
Q ss_pred EEEe-cCCCCccccc----CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccc
Q 010886 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (498)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~ 212 (498)
|.++ +.++|++.+. ++++++|.||++||++|+++.|.|+++++.+. .+.++.||+++++. ++++++
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~---~~~~~~----- 86 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKE---VAEKYN----- 86 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGG---GHHHHT-----
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHH---HHHHcC-----
Confidence 4556 4578988884 48999999999999999999999999999986 47899999996654 899998
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
|+++||+++|++|... ..+.| .+.+.|.+++.+.+
T Consensus 87 -v~~~Pt~~~~~~g~~~----~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 87 -VEAMPTFLFIKDGAEA----DKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp -CCSSCCCCBCTTTTCC----BCCCT-TCTTTHHHHHHHHT
T ss_pred -CCccceEEEEeCCeEE----EEEeC-CCHHHHHHHHHHHH
Confidence 9999999999888652 35677 58889999998874
No 132
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.46 E-value=9.4e-14 Score=110.83 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=72.2
Q ss_pred CcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCc
Q 010886 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (498)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~ 233 (498)
.+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++. ++++++ |+++||+++ +|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~~----- 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ---KAMEYG------IMAVPTIVI--NGDV----- 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC---TTTSTT------TCCSSEEEE--TTEE-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHH---HHHHCC------CcccCEEEE--CCEE-----
Confidence 467999999999999999999999999998789999999997654 888888 999999988 6642
Q ss_pred ccccCCCCHHHHHHHHHHH
Q 010886 234 TRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 234 ~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.+.|..+.+.|.+|+.+.
T Consensus 67 -~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 67 -EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp -ECCSSSSSHHHHHHHHHH
T ss_pred -eeecCCCHHHHHHHHHHh
Confidence 588999999999999765
No 133
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.46 E-value=2.4e-14 Score=131.34 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=56.3
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC------hHHHHHHHHhhhhHcCChhhhhcc
Q 010886 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNY 96 (498)
Q Consensus 37 ~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~ay~~L~d~~~r~~y 96 (498)
.|+|++|||++.|+.++||+|||+++++||||++++ +.++|++|++||++|+||.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 699999999999999999999999999999999763 467899999999999999999987
No 134
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.46 E-value=1.8e-14 Score=132.12 Aligned_cols=63 Identities=11% Similarity=0.258 Sum_probs=57.8
Q ss_pred ccccccCCCCCC--CHHHHHHHHHHHHhhcCCCCCCC--------hHHHHHHHHhhhhHcCChhhhhcccccC
Q 010886 38 SHYDALGIKPYS--SVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDVYG 100 (498)
Q Consensus 38 d~y~ilgv~~~a--~~~~ik~ayr~l~~~~HPD~~~~--------~~~~f~~i~~ay~~L~d~~~r~~yd~~g 100 (498)
|||++|||++++ +..+||++||+|+++||||++++ +.++|..|++||++|+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 99999999999999999999763 2357999999999999999999999753
No 135
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.45 E-value=1.3e-13 Score=110.03 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=71.9
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcc
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~ 234 (498)
+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++. ++++++ |+++||+++ +|..
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~~------ 65 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE---KAIEYG------LMAVPAIAI--NGVV------ 65 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG---GGGGTC------SSCSSEEEE--TTTE------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---HHHhCC------ceeeCEEEE--CCEE------
Confidence 46899999999999999999999999998889999999997654 889998 999999998 6642
Q ss_pred cccCCCCHHHHHHHHHHH
Q 010886 235 RFEGELSVDAVTDWFATA 252 (498)
Q Consensus 235 ~Y~G~r~~~~Iv~fv~k~ 252 (498)
.+.|..+.+.|.+++.+.
T Consensus 66 ~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 66 RFVGAPSREELFEAINDE 83 (85)
T ss_dssp EEECSSCCHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHH
Confidence 588999999999999875
No 136
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.45 E-value=8e-15 Score=139.95 Aligned_cols=100 Identities=16% Similarity=0.276 Sum_probs=83.8
Q ss_pred EEEe-cCCCCcccccC---CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVV-TSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~L-t~~nF~~~v~~---~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
|.+| +.++|.+.|.+ +++++|.||+|||++|+.+.|.|+++|+.+. .++|++||++ ++ .++.+|+
T Consensus 101 v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~---~l~~~~~------ 169 (217)
T 2trc_P 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NT---GAGDRFS------ 169 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HH---TCSTTSC------
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cH---HHHHHCC------
Confidence 6788 88999998843 3899999999999999999999999999884 6899999998 43 3788888
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCC-------HHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELS-------VDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~-------~~~Iv~fv~k~ 252 (498)
|+++||+++|++|.. ...|.|.++ .++|..|+.+.
T Consensus 170 i~~~PTl~~~~~G~~----v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 SDVLPTLLVYKGGEL----ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp GGGCSEEEEEETTEE----EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEE----EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999998865 246677665 48888888765
No 137
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.45 E-value=2.9e-14 Score=134.47 Aligned_cols=64 Identities=13% Similarity=0.128 Sum_probs=57.5
Q ss_pred CccccccccCCCCC--CCHHHHHHHHHHHHhhcCCCCCCC--------hHHHHHHHHhhhhHcCChhhhhcccc
Q 010886 35 FPPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDV 98 (498)
Q Consensus 35 ~~~d~y~ilgv~~~--a~~~~ik~ayr~l~~~~HPD~~~~--------~~~~f~~i~~ay~~L~d~~~r~~yd~ 98 (498)
...|||++|||+++ ++.++||++||+|++++|||++++ +.++|.+|++||++|+||.+|..||.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 36799999999997 789999999999999999999763 23569999999999999999999985
No 138
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.44 E-value=4.5e-14 Score=123.77 Aligned_cols=102 Identities=16% Similarity=0.257 Sum_probs=83.5
Q ss_pred cCCCCccccc--CCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccc-hhhhHHHHhCCCCccccee
Q 010886 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI-RLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 142 t~~nF~~~v~--~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~-~~~~~l~~~~~~~~~~~I~ 215 (498)
+.++|+..+. .+++++|.||++||++|+.+.|.+ +++++.+++ +.+..||++++ .....++++++ |.
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~------v~ 90 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN------VL 90 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT------CC
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC------CC
Confidence 4456776664 388999999999999999999999 999999876 89999999642 23456999999 99
Q ss_pred eeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++||+++| ++|... ....+.|..+.++|.+++.+.
T Consensus 91 ~~Pt~~~~d~~G~~v--~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 91 GLPTILFFDGQGQEH--PQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSSEEEEECTTSCBC--GGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCEe--eeeeeeeccCHHHHHHHHHhc
Confidence 99999999 777652 013688999999999999875
No 139
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2e-14 Score=112.42 Aligned_cols=58 Identities=16% Similarity=0.068 Sum_probs=53.3
Q ss_pred ccccccccCCCC-CCCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCChhhhh
Q 010886 36 PPSHYDALGIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKR 94 (498)
Q Consensus 36 ~~d~y~ilgv~~-~a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d~~~r~ 94 (498)
..++|+||||++ +++.++||+|||+|++++|||++ ++.++|++|++||++|+|+..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 468999999999 79999999999999999999996 67889999999999999987664
No 140
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.43 E-value=6.9e-14 Score=122.74 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=89.3
Q ss_pred EEEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee-
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG- 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~- 216 (498)
|.++|.+||++.+++..+++|.|||+ |++|+.++|.++++|+++++.+.|++||.++++. ++++|| |++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~---~a~~~g------i~~~ 77 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGA---HAGNLN------LKTD 77 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGG---GTTTTT------CCSS
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHH---HHHHcC------CCcc
Confidence 56899999998888889999999999 8999999999999999999999999999996654 889998 889
Q ss_pred -eeEEEEeCC--CCcCCCCccccc--CCCCHHHHHHHHHHHh
Q 010886 217 -LPSLVAFPP--GCKSSDCMTRFE--GELSVDAVTDWFATAI 253 (498)
Q Consensus 217 -~PTl~~f~~--g~~~~~~~~~Y~--G~r~~~~Iv~fv~k~~ 253 (498)
.||+++|.+ |... .+. |..+.+.|.+|+.+.+
T Consensus 78 ~iPtl~i~~~~~g~~~-----~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 78 KFPAFAIQEVAKNQKF-----PFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSSEEEEECTTTCCBC-----CCCSSSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCcCccc-----CCCCccccCHHHHHHHHHHHH
Confidence 999999997 5432 443 9999999999998864
No 141
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.43 E-value=5.1e-14 Score=134.51 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=84.7
Q ss_pred EEEecCCCCcccccCCCcE-EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~-lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
+..|+.++|+..++.++.+ +|.||+|||++|+++.|.|+++++.+ +.+.++.|||++++ .+|++++ |++
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~---~l~~~~~------v~~ 189 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQ---DLAEQFQ------VVG 189 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCH---HHHHHTT------CCS
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCH---HHHHHcC------Ccc
Confidence 4568888898887665555 88999999999999999999999998 56899999999655 4999999 999
Q ss_pred eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+||+++ +|.. ..|.|.++.++|.+|+.+.+
T Consensus 190 ~Pt~~~--~G~~-----~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 190 VPKIVI--NKGV-----AEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp SSEEEE--GGGT-----EEEESCCCHHHHHHHHHHHH
T ss_pred cCEEEE--CCEE-----EEeeCCCCHHHHHHHHHHHh
Confidence 999998 6653 36999999999999998873
No 142
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.41 E-value=3.2e-14 Score=119.91 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=49.9
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCC--C--------hHHHHHHHHhhhhHcCChh
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--P--------STADFLKIQYAYELLTDPL 91 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~--~--------~~~~f~~i~~ay~~L~d~~ 91 (498)
..|||++||+++ |+.++||+|||+++++||||+++ + +.++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 99999999999999999999875 2 3678999999999999985
No 143
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.41 E-value=1e-13 Score=120.77 Aligned_cols=92 Identities=18% Similarity=0.294 Sum_probs=76.3
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHH--HHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccce---eeeeEEEEe-C
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWK--TIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR---RGLPSLVAF-P 224 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~--~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I---~~~PTl~~f-~ 224 (498)
.++++++|.||++||++|+.+.|.++ ++++.+++.+.+..||+++......++++|+ | .++||+++| +
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~------v~~~~~~Pt~~~~d~ 100 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYG------DPIQDGIPAVVVVNS 100 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTT------CGGGGCSSEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhC------CccCCccceEEEECC
Confidence 56999999999999999999999999 9999998789999999932113345999999 8 999999999 7
Q ss_pred CCCcCCCCcccccC-------CCCHHHHHHHHHHH
Q 010886 225 PGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (498)
Q Consensus 225 ~g~~~~~~~~~Y~G-------~r~~~~Iv~fv~k~ 252 (498)
+|.. ...+.| ..+.++|.+|+.+.
T Consensus 101 ~G~~----~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 101 DGKV----RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TSCE----EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCE----EEEecCCcccccccCCHHHHHHHHHHh
Confidence 7765 234556 57889999998764
No 144
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.41 E-value=4e-14 Score=137.32 Aligned_cols=100 Identities=16% Similarity=0.252 Sum_probs=82.7
Q ss_pred EEEe-cCCCCccccc---CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccc
Q 010886 138 FNVV-TSEDFPSIFH---DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (498)
Q Consensus 138 V~~L-t~~nF~~~v~---~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (498)
|.+| +.++|.+.|. ++++++|.||||||++|+.+.|.|+++|+.+.+ ++|++||+++ ..++.+|+
T Consensus 114 V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~------ 182 (245)
T 1a0r_P 114 VYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFS------ 182 (245)
T ss_dssp EEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSC------
T ss_pred EEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCC------
Confidence 6788 6889999883 478999999999999999999999999999865 8999999984 33778887
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCC-------CCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~-------r~~~~Iv~fv~k~ 252 (498)
|+++||+++|++|... ..+.|. ++.++|..|+.+.
T Consensus 183 I~~~PTll~~~~G~~v----~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 183 SDVLPTLLVYKGGELL----SNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp TTTCSEEEEEETTEEE----EEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEEE----EEEeCCcccccccccHHHHHHHHHHc
Confidence 9999999999988652 233332 5678888888776
No 145
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.39 E-value=3.8e-14 Score=119.76 Aligned_cols=78 Identities=10% Similarity=-0.015 Sum_probs=63.7
Q ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc-h--hhhHHHHhCCCCcccceeeeeEEEEeCCCCcC
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-R--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~-~--~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~ 229 (498)
+++.+|+||||||++|++++|.|+++|+.++ .|||+.+ . ....+|++++ |+++||+++ +|.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~------V~~~PT~~i--~G~-- 75 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NGR-- 75 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTT------CCSSSEEEE--TTE--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcC------CeEeCEEEE--CCE--
Confidence 4567899999999999999999999987664 7788721 1 2345999999 999999877 553
Q ss_pred CCCcccccCCCCHHHHHHHHHH
Q 010886 230 SDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 230 ~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
.|.|.++.++|.+|+.-
T Consensus 76 -----~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 76 -----TYTGVRSLEALAVASGY 92 (106)
T ss_dssp -----EEESCCCHHHHHHHHTC
T ss_pred -----EecCCCCHHHHHHHhCC
Confidence 58999999999999843
No 146
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.39 E-value=4.2e-13 Score=130.13 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=74.2
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhh----ccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~----~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~ 227 (498)
.++++++.||||||+||+++.|.|+++|..+. +.+.++.||+++++ .++++|+ |+++||+++ +|.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------V~~vPt~~i--~G~ 205 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP---DIADKYG------VMSVPSIAI--NGY 205 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH---HHHHHTT------CCSSSEEEE--TTE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH---HHHHHcC------CeeeCeEEE--CCE
Confidence 36678999999999999999999999999984 56899999999665 4899999 999999988 664
Q ss_pred cCCCCcccccCCCCHHHHHHHHHHH
Q 010886 228 KSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 228 ~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
. .|.|.++.++|++|+.+.
T Consensus 206 ~------~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 206 L------VFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp E------EEESCCCHHHHHHHHHHH
T ss_pred E------EEeCCCCHHHHHHHHHHH
Confidence 3 599999999999999987
No 147
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.38 E-value=8e-14 Score=120.39 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=81.3
Q ss_pred EEEecCCCCcccccC--CCcEEEEEecC-------CCCCCCCChHHHHHHHHHhhccceEEEEEc-------ccchhhhH
Q 010886 138 FNVVTSEDFPSIFHD--SKPWLIQVYSD-------GSYLCGQFSGAWKTIAALLEGIANTGMVEL-------GDIRLATH 201 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~--~~~~lV~FYap-------wC~~C~~l~p~~~~~A~~l~~~i~va~Vdc-------~~~~~~~~ 201 (498)
|...+.++|++.+.+ +++++|.|||+ ||++|+.+.|.++++++.+.+.+.++.||+ +++ ..
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~---~~ 83 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPN---ND 83 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTT---CH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchh---HH
Confidence 566788899988854 89999999999 999999999999999999877889999999 533 34
Q ss_pred HHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHH
Q 010886 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (498)
Q Consensus 202 l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~ 250 (498)
++++++ |+++||+++|.++... ..+.| .+.+.|.+|+.
T Consensus 84 ~~~~~~------i~~~Pt~~~~~~~~~~----~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 84 FRKNLK------VTAVPTLLKYGTPQKL----VESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHHHHC------CCSSSEEEETTSSCEE----EGGGG-GCHHHHHHHHH
T ss_pred HHHHCC------CCeeCEEEEEcCCceE----ecccc-CCHHHHHHHHh
Confidence 888888 9999999999986432 22333 56778888875
No 148
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.38 E-value=5.7e-12 Score=128.38 Aligned_cols=202 Identities=9% Similarity=0.125 Sum_probs=143.6
Q ss_pred EEEec-CCCCccccc-CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 138 FNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 138 V~~Lt-~~nF~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
+.+|+ .+++++.++ +++.++|.||++||. ...+.|.++|+.+.+.+.+|.++.. ++|++++ |+
T Consensus 125 ~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~~~f~~~~~~------~~~~~~~------v~ 189 (350)
T 1sji_A 125 VEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQPYIKFFATFDK------GVAKKLS------LK 189 (350)
T ss_dssp EEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTTTSEEEEECCH------HHHHHHT------CC
T ss_pred ceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhccCcEEEEECCH------HHHHHcC------CC
Confidence 56775 467888887 788999999999864 5579999999999988999988543 3899998 98
Q ss_pred eeeEEEEeCCCCcCCCCcccccCC-CCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCC----
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE---- 290 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~-r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~---- 290 (498)
+|++++|+++... +..|.|. ++.++|.+|+.+. ..|....++..+ ...+.+. +.....+++|.+...
T Consensus 190 -~p~i~~~~~~~~~---~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~-~~~~~~~l~f~~~~~~~~~ 261 (350)
T 1sji_A 190 -MNEVDFYEPFMDE---PIAIPDKPYTEEELVEFVKEH--QRPTLRRLRPED-MFETWED-DLNGIHIVAFAERSDPDGY 261 (350)
T ss_dssp -TTCEEEECTTCSS---CEECSSSSCCHHHHHHHHHHH--CCCSEEECCTTT-HHHHHHS-CSSSEEEEEECCTTSHHHH
T ss_pred -CCcEEEEeCCCCC---ceecCCCCCCHHHHHHHHHHc--CccchhhcChhh-HHHHhcC-CCCCcEEEEEEcCCCccHH
Confidence 9999999985432 4689997 9999999999987 567766676655 3444432 111233444543211
Q ss_pred CCcHHHHHHHHhccc--cceEEEEEecccccHHHH----HHcCCC-CCCEEEEEeCCCCceee--e---cCCCChhHHHH
Q 010886 291 RASPFVRQISRNYWA--YASFAFVLWREEESSIWW----NTFEVE-SAPAIVFLKDPGVKPVV--Y---YGSFNNSRLSE 358 (498)
Q Consensus 291 ~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~~~l~----~~f~V~-~~Pti~lfk~~~~~~~~--y---~g~~~~~~L~~ 358 (498)
.....++.+|.++++ .+.|+.+...+ ...++ +.||+. .+|+++++...+..... + +|.++.+.|.+
T Consensus 262 ~~~~~~~~vA~~~~~~~~~~f~~id~~~--~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 339 (350)
T 1sji_A 262 EFLEILKQVARDNTDNPDLSIVWIDPDD--FPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELED 339 (350)
T ss_dssp HHHHHHHHHHHHGGGCSSCCEEEECGGG--CHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEEECchh--hHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHH
Confidence 112445668888876 77888876332 24466 789998 47999999763332222 2 24788999999
Q ss_pred HHHhcc
Q 010886 359 VMEQNK 364 (498)
Q Consensus 359 fi~~~~ 364 (498)
|++...
T Consensus 340 F~~d~~ 345 (350)
T 1sji_A 340 WIEDVL 345 (350)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998753
No 149
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.05 E-value=6.1e-14 Score=121.66 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCcccccCCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEE
Q 010886 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
+.+.....++++++|.|||+||++|+.+.|.+ +++++.+++.+.+..||++.+ ....++++++ |+++||+
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~ 82 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTP-EGQELARRYR------VPGTPTF 82 (130)
Confidence 34445557789999999999999999999999 999998888788999999633 2245888888 9999999
Q ss_pred EEe--CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 221 VAF--PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 221 ~~f--~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
++| .+|... ....+.|.++.+.|.+++.+.
T Consensus 83 ~~~d~~~G~~~--~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 83 VFLVPKAGAWE--EVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 999 556530 013688999999999999876
No 150
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.36 E-value=6.5e-12 Score=129.04 Aligned_cols=209 Identities=11% Similarity=0.109 Sum_probs=146.2
Q ss_pred EEEecC-CCCccccc-CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 138 FNVVTS-EDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
|..+++ +++++.++ ++++++|-||++||+ ...+.|.++|..+.+.+.||.++.. . +|++++ |+
T Consensus 127 v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~~---~---~~~~~~------v~ 191 (367)
T 3us3_A 127 VELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATFDS---K---VAKKLT------LK 191 (367)
T ss_dssp EEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHT------CC
T ss_pred cEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEECCH---H---HHHHcC------CC
Confidence 567754 77888887 789999999999865 5688999999999998999998754 3 889998 77
Q ss_pred eeeEEEEeCCCCcCCCCcccccCC-CCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCC----
Q 010886 216 GLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE---- 290 (498)
Q Consensus 216 ~~PTl~~f~~g~~~~~~~~~Y~G~-r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~---- 290 (498)
+ |+|++|+++... +..|.|. ++.++|.+|+... ..|....++..+. ........ ..+.+++|.+...
T Consensus 192 ~-p~i~lf~~~~~~---~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~~-~~~~~~~~-~~~~~~~f~~~~~~~~~ 263 (367)
T 3us3_A 192 L-NEIDFYEAFMEE---PVTIPDKPNSEEEIVNFVEEH--RRSTLRKLKPESM-YETWEDDM-DGIHIVAFAEEADPDGY 263 (367)
T ss_dssp T-TCEEEECTTCSS---CEECSSSSCCHHHHHHHHHHT--CSCSEEECCGGGH-HHHHHSCB-TTEEEEEECCTTSHHHH
T ss_pred C-CeEEEEcCCCCC---CeecCCCCCCHHHHHHHHHHc--CccceeecChhhH-HHHHhhcc-CCcEEEEEEcCCChhHH
Confidence 6 999999986432 5689995 9999999999998 5676666776553 33333211 2234444543211
Q ss_pred CCcHHHHHHHHhccc--cceEEEEEeccccc--HHHHHHcCCC-CCCEEEEEeCCCCc--eeeecC---CCChhHHHHHH
Q 010886 291 RASPFVRQISRNYWA--YASFAFVLWREEES--SIWWNTFEVE-SAPAIVFLKDPGVK--PVVYYG---SFNNSRLSEVM 360 (498)
Q Consensus 291 ~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~--~~l~~~f~V~-~~Pti~lfk~~~~~--~~~y~g---~~~~~~L~~fi 360 (498)
.....++.+|.++++ .+.|+++...+... +.+.+.||+. ..|+++++...+.. ...+.+ .++.+.|.+|+
T Consensus 264 ~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~ 343 (367)
T 3us3_A 264 EFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWL 343 (367)
T ss_dssp HHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHH
Confidence 112345668888987 68888886543211 1124569997 78999999864432 222343 68999999999
Q ss_pred HhcccCCCC
Q 010886 361 EQNKLQELP 369 (498)
Q Consensus 361 ~~~~~~~vp 369 (498)
+...-..+.
T Consensus 344 ~~~~~Gkl~ 352 (367)
T 3us3_A 344 EDVLEGEIN 352 (367)
T ss_dssp HHHHHTSSC
T ss_pred HHHHcCCcC
Confidence 976544443
No 151
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.35 E-value=9.8e-11 Score=124.12 Aligned_cols=285 Identities=11% Similarity=0.136 Sum_probs=185.7
Q ss_pred EEEe-cCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~L-t~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
+..+ +.+++++.++.+++++|-||.++|.. ..+.|.++|..+.+.+.|+.++-. .++++++ |..
T Consensus 112 ~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~---~~~~f~~~a~~~~~~~~F~~~~~~------~~~~~~~------v~~ 176 (481)
T 3f8u_A 112 SVPLRTEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRDNYRFAHTNVE------SLVNEYD------DNG 176 (481)
T ss_dssp EEEECSHHHHHHHTTSSSCEEEEEESCTTCH---HHHHHHHHHHHHTTTSCEEEECCH------HHHHHHC------SSS
T ss_pred ceecCCHHHHHHHHhcCCcEEEEEECCCccc---hHHHHHHHHHHhccCceEEEECCH------HHHHHhC------CCC
Confidence 4566 45678888888999999999988664 478999999999999999877533 3888888 878
Q ss_pred eeEEEEeCCCCc---CCCCccccc-CCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCC
Q 010886 217 LPSLVAFPPGCK---SSDCMTRFE-GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERA 292 (498)
Q Consensus 217 ~PTl~~f~~g~~---~~~~~~~Y~-G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~ 292 (498)
.| +++|+++.. .......|. |..+.++|.+|+... ..|....++..+ ...+.. . ...++++.......
T Consensus 177 ~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~--~~p~v~e~t~~n-~~~~~~-~---~~~v~~~~~~~~~~ 248 (481)
T 3f8u_A 177 EG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQG-K---DLLIAYYDVDYEKN 248 (481)
T ss_dssp EE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHH--TTTTSCEECTTT-HHHHTT-S---SEEEEEECCCTTTC
T ss_pred Cc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHh--CCCCccccChhH-HHHhcC-C---CceEEEEecccccc
Confidence 77 778873210 011245788 889999999999988 567665566544 344432 1 23444443221111
Q ss_pred c-------HHHHHHHHhcccc---ceEEEEEecccccHHHHHHcCCC----CCCEEEEEeCCCCceeeecCCCChh--HH
Q 010886 293 S-------PFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVE----SAPAIVFLKDPGVKPVVYYGSFNNS--RL 356 (498)
Q Consensus 293 ~-------~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V~----~~Pti~lfk~~~~~~~~y~g~~~~~--~L 356 (498)
. ..++.+|.++++. +.|+.+... +.....+.||++ ..|.++++.. +.....+.+.++.+ .|
T Consensus 249 ~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~--~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l 325 (481)
T 3f8u_A 249 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKAL 325 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHH
T ss_pred hhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHH--HHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHH
Confidence 1 2245588888877 888886532 235677899997 5899999863 33444567788888 99
Q ss_pred HHHHHhcccCCC---------C--------cccccchhhhccCCCCCcCCCCCCceeEEEEEeCCCchhhHHHHHHHHHH
Q 010886 357 SEVMEQNKLQEL---------P--------QLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRV 419 (498)
Q Consensus 357 ~~fi~~~~~~~v---------p--------~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~ 419 (498)
.+|++...-..+ | .++..++.+..-. .++ .+.|.+..+--.....+...+.++
T Consensus 326 ~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~------~~k----~vlv~f~a~wC~~C~~~~p~~~~l 395 (481)
T 3f8u_A 326 ERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN------ENK----DVLIEFYAPWCGHCKNLEPKYKEL 395 (481)
T ss_dssp HHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC------TTC----EEEEEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc------CCC----cEEEEEecCcChhHHHhhHHHHHH
Confidence 999976422211 1 2222332221111 122 233333333333456777778888
Q ss_pred HHhhcccccccccccCCCchHHHHhccCC-ceEEEEEeCccCchhhhhhhhhhheeeeccCCceeeeeeccc
Q 010886 420 QETLLSDDESNAADTDQSLAPAAVAFRNK-RLTFAWLDGEAQDVSFIMLISLFYVDFFLHSDLFVLWLLFPS 490 (498)
Q Consensus 420 a~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~f~wvd~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (498)
++ .+++. .+.|+.||+..+ + ++.-|....+|.++++.+.
T Consensus 396 ~~----------------------~~~~~~~v~~~~id~~~~-~---------~~~~~~v~~~Pt~~~~~~~ 435 (481)
T 3f8u_A 396 GE----------------------KLSKDPNIVIAKMDATAN-D---------VPSPYEVRGFPTIYFSPAN 435 (481)
T ss_dssp HH----------------------HTTTCSSEEEEEEETTSS-C---------CCTTCCCCSSSEEEEECTT
T ss_pred HH----------------------HhccCCCEEEEEEECCch-h---------hHhhCCCcccCEEEEEeCC
Confidence 88 55553 699999999886 6 5556788899998877654
No 152
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.31 E-value=3.2e-11 Score=117.25 Aligned_cols=205 Identities=12% Similarity=0.184 Sum_probs=145.0
Q ss_pred EEEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|.+|++ ++++++++++++++|-|+++|| ....+.|.++|..+.+.+.|+.+.- ..++++++ +++
T Consensus 8 v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~~------~~v~~~~~------~~~ 72 (252)
T 2h8l_A 8 SVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTNV------ESLVNEYD------DNG 72 (252)
T ss_dssp EEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEECC------HHHHHHHC------SSS
T ss_pred ceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEECh------HHHHHHhC------CCC
Confidence 567854 5577778889999999999984 5678899999999998889988842 23888888 887
Q ss_pred eeEEEEeCCCCcC---CCCcccc-cCCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCC
Q 010886 217 LPSLVAFPPGCKS---SDCMTRF-EGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERA 292 (498)
Q Consensus 217 ~PTl~~f~~g~~~---~~~~~~Y-~G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~ 292 (498)
|+|++|+++... ......| .|.++.++|.+|+... .+|.+..++..+ ...+. +.+ .+++++....+..
T Consensus 73 -p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~--~~Plv~e~t~~n-~~~~~-~~~---~~v~~~~~~~~~~ 144 (252)
T 2h8l_A 73 -EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQ-GKD---LLIAYYDVDYEKN 144 (252)
T ss_dssp -EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH--SSCSSCEECTTT-HHHHS-SSS---EEEEEECCBTTTB
T ss_pred -CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc--ccCCeeeccccc-Hhhhc-CCC---eEEEEeecchhhc
Confidence 999999975210 1224589 9999999999999998 578777777655 34432 222 4555553221111
Q ss_pred -------cHHHHHHHHhcccc---ceEEEEEecccccHHHHHHcCC--C--CCCEEEEEeCCCCceeeecCCCChhH--H
Q 010886 293 -------SPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEV--E--SAPAIVFLKDPGVKPVVYYGSFNNSR--L 356 (498)
Q Consensus 293 -------~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V--~--~~Pti~lfk~~~~~~~~y~g~~~~~~--L 356 (498)
...++.+|.++++. +.|+++... +...+++.||+ . ..|+|+++... .....+.++++.+. |
T Consensus 145 ~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i 221 (252)
T 2h8l_A 145 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKAL 221 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHH
T ss_pred chhHHHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHH
Confidence 12234488888876 888888643 23558899999 3 48999998642 33334567888888 9
Q ss_pred HHHHHhcccCCC
Q 010886 357 SEVMEQNKLQEL 368 (498)
Q Consensus 357 ~~fi~~~~~~~v 368 (498)
.+|++...-..+
T Consensus 222 ~~F~~~~~~Gkl 233 (252)
T 2h8l_A 222 ERFLQDYFDGNL 233 (252)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHCCCc
Confidence 999997654444
No 153
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.30 E-value=9.6e-13 Score=120.01 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=80.7
Q ss_pred EEecCCCCcccc----cCCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccchhhh-----------
Q 010886 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLAT----------- 200 (498)
Q Consensus 139 ~~Lt~~nF~~~v----~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~~~~~----------- 200 (498)
..++..+|++.+ .++++++|.|||+||++|+.+.+.. .++++.+++.+.+..||++++....
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 346677788777 6689999999999999999986655 6666666667889999998654210
Q ss_pred -----------HH-HHhCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCC-HHHHHHHHHHH
Q 010886 201 -----------HL-AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELS-VDAVTDWFATA 252 (498)
Q Consensus 201 -----------~l-~~~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~-~~~Iv~fv~k~ 252 (498)
.+ +++|+ |.++||++++ ++|+. ...+.|.++ .+.+.+|+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~------v~~~Pt~~lid~~G~~----~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFG------ANAQPFYVLIDNEGNP----LNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHS------CCCSSEEEEECTTSCB----SSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcC------CCCcceEEEECCCCCE----EeeccCCCCCHHHHHHHHHHH
Confidence 00 56667 9999999999 67765 245679998 99999999876
No 154
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.28 E-value=7.5e-13 Score=113.31 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=67.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-----ceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-----ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-----i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g 226 (498)
+....||+||||||++|+.+.|+.. ..++.. +.+.+||.+++.. ..++.+++ |.+.|||++|.+|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~---~~~~~~a~~~~~~l~~vdv~~~~~-~~la~~~~------V~g~PT~i~f~~G 86 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIA---PQYPLTDEGRAAPVQRLQMRDPLP-PGLELARP------VTFTPTFVLMAGD 86 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTT---TTGGGSHHHHHSCEEEEETTSCCC-TTCBCSSC------CCSSSEEEEEETT
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHH---hhHHHhhhcccceEEEEECCCCCc-hhHHHHCC------CCCCCEEEEEECC
Confidence 4568999999999999999865332 222222 6789999997632 34777777 9999999999998
Q ss_pred CcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 227 CKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 227 ~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+. ..+..|....+.+..|+.+.+
T Consensus 87 ~e----v~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 87 VE----SGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp EE----EEEEECCCCHHHHHHHHHHHH
T ss_pred EE----EeeecCCCCHHHHHHHHHHHH
Confidence 76 347889999999999998764
No 155
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.27 E-value=2.7e-12 Score=100.60 Aligned_cols=73 Identities=18% Similarity=0.202 Sum_probs=62.3
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y 236 (498)
.|.||++||++|+.+.|.++++++.+.+.+.+..|| + .+++++++ |+++||+++ +|+. .+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~---~~~~~~~~------v~~~Pt~~~--~G~~------~~ 62 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---E---MDQILEAG------LTALPGLAV--DGEL------KI 62 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---S---HHHHHHHT------CSSSSCEEE--TTEE------EE
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---C---HHHHHHCC------CCcCCEEEE--CCEE------EE
Confidence 589999999999999999999999998778888888 2 34889998 999999988 7754 34
Q ss_pred cCCC-CHHHHHHHH
Q 010886 237 EGEL-SVDAVTDWF 249 (498)
Q Consensus 237 ~G~r-~~~~Iv~fv 249 (498)
.|.+ +.++|.+|+
T Consensus 63 ~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 63 MGRVASKEEIKKIL 76 (77)
T ss_dssp CSSCCCHHHHHHHC
T ss_pred cCCCCCHHHHHHHh
Confidence 4887 899998875
No 156
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.25 E-value=1.1e-12 Score=111.12 Aligned_cols=100 Identities=11% Similarity=0.097 Sum_probs=80.7
Q ss_pred EEec-CCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceee
Q 010886 139 NVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRG 216 (498)
Q Consensus 139 ~~Lt-~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~ 216 (498)
..|+ .++|+++++++++++|.|+|.|||.|+.+.|.++++++. +.+.+..||.++++.. .++|++++ |++
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~------V~h 80 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTN------VKH 80 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHT------CCC
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhC------Ccc
Confidence 4564 466999998899999999999999999999999999984 6689999999977542 34799999 995
Q ss_pred -eeEEEEeCCCCcCCCCcccccCCCCHHHHHHHH
Q 010886 217 -LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWF 249 (498)
Q Consensus 217 -~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv 249 (498)
.||+++|++|+.. ...-.|..+.++|.+.+
T Consensus 81 ~sPq~il~k~G~~v---~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMV---WNRDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEE---EEEEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEEE---EEeeccccCHHHHHHhh
Confidence 9999999999762 11223778888777653
No 157
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.22 E-value=1.5e-12 Score=118.38 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=76.8
Q ss_pred CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEe
Q 010886 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF 223 (498)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f 223 (498)
++|+....++++++|.|||+||++|+.+.|.++++++.....+.|..||+++++. .++.++++. ++++||+++|
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~--~~~~~~~~~----~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEE--PKDEDFSPD----GGYIPRILFL 110 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGS--CSCGGGCTT----CSCSSEEEEE
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCch--HHHHHhccc----CCcCCeEEEE
Confidence 3455555778999999999999999999999999887766557888999985532 155666622 4779999999
Q ss_pred -CCCCcCCCCcccccC----------CCCHHHHHHHHHHHh
Q 010886 224 -PPGCKSSDCMTRFEG----------ELSVDAVTDWFATAI 253 (498)
Q Consensus 224 -~~g~~~~~~~~~Y~G----------~r~~~~Iv~fv~k~~ 253 (498)
++|... ..+.| ..+.+.|++++.+.+
T Consensus 111 d~~G~~~----~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 111 DPSGKVH----PEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CTTSCBC----TTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCCCEE----EEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 677652 34556 378999999998863
No 158
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.20 E-value=1.5e-11 Score=110.41 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=78.1
Q ss_pred CCcccc----cCCCcEEEEEe-cCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccch--------hhhHHHHhCCC
Q 010886 145 DFPSIF----HDSKPWLIQVY-SDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIR--------LATHLAERKPI 208 (498)
Q Consensus 145 nF~~~v----~~~~~~lV~FY-apwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~~--------~~~~l~~~~~~ 208 (498)
++++.+ .++++++|.|| |+||++|+++.|.+ .++++.+...+.+..||++++. ....++++|+
T Consensus 35 ~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~- 113 (154)
T 2ju5_A 35 SYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK- 113 (154)
T ss_dssp CHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC-
Confidence 344544 45889999999 99999999999999 7887776666889999998642 2346899998
Q ss_pred CcccceeeeeEEEEe-CCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. ...+ |.. +.+.+.+++.+.
T Consensus 114 -----v~~~Pt~~~~d~~G~~----~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 114 -----VTGFPELVFIDAEGKQ----LARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp -----CCSSSEEEEECTTCCE----EEEE-CCCTTCHHHHHHHHHHH
T ss_pred -----CCCCCEEEEEcCCCCE----EEEe-cCCCCCHHHHHHHHHHH
Confidence 9999999999 67765 2356 888 899999999876
No 159
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.18 E-value=3.8e-11 Score=105.21 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=82.0
Q ss_pred EecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc-----------------------
Q 010886 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----------------------- 196 (498)
Q Consensus 140 ~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~----------------------- 196 (498)
.++.+.+....-.+++++|.||++||++|+...|.++++++.+.+.+.+..|+++..
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 455555544444678999999999999999999999999999987799999997631
Q ss_pred -hhhhHHHHhCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 197 -RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 197 -~~~~~l~~~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.....++++++ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 96 ~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 96 VDSDHALTDAFE------NEYVPAYYVFDKTGQL----RHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp ECSSCHHHHHTC------CCCSSEEEEECTTCBE----EEEEESCSTTHHHHHHHHHH
T ss_pred ECCchhHHHHhC------CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 12245888888 9999999999 66654 34577999999999999876
No 160
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.17 E-value=6.7e-10 Score=107.81 Aligned_cols=205 Identities=13% Similarity=0.096 Sum_probs=140.0
Q ss_pred EEEecC-CCCcccccC-CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee
Q 010886 138 FNVVTS-EDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~-~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~ 215 (498)
|.+|++ +++++++++ +++|+|-|++++| ....+.|.++|+.+.+.+.||.+.-. +++++++ ++
T Consensus 8 v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~~~------~v~~~~~------v~ 72 (250)
T 3ec3_A 8 SKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTFST------EIAKFLK------VS 72 (250)
T ss_dssp SEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEECCH------HHHHHHT------CC
T ss_pred ceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEECcH------HHHHHcC------CC
Confidence 466765 778888887 9999999999975 57889999999999999999887522 3788888 87
Q ss_pred eeeEEEEeCCCCc---CCCCccccc--CCCCHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecC-C
Q 010886 216 GLPSLVAFPPGCK---SSDCMTRFE--GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-G 289 (498)
Q Consensus 216 ~~PTl~~f~~g~~---~~~~~~~Y~--G~r~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~-~ 289 (498)
+ |+|++|+++.. .......|. |.++.++|.+|+... .+|-+..++..+. .....+.+ .+++++..+ .
T Consensus 73 ~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~--~~Plv~e~t~~n~-~~~~~~~~---l~~~~~~~d~~ 145 (250)
T 3ec3_A 73 L-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH--ALPLVGHRKTSND-AKRYSKRP---LVVVYYSVDFS 145 (250)
T ss_dssp S-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH--SSCTEEEECTTTH-HHHSCSSS---EEEEEECCCCS
T ss_pred C-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc--CCCceeecCccch-hhhhccCc---cEEEEEecccc
Confidence 8 99999997421 011245788 589999999999998 5787766776553 33233222 344444311 1
Q ss_pred CC-------CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCC--C-CEEEEEeCCCCceeeec-CCCChhHHHH
Q 010886 290 ER-------ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A-PAIVFLKDPGVKPVVYY-GSFNNSRLSE 358 (498)
Q Consensus 290 ~~-------~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~--~-Pti~lfk~~~~~~~~y~-g~~~~~~L~~ 358 (498)
+. ....++.+|.+++ .+.|+++...+ .....+.||+.. . |.++++.. +.....+. +.++.+.|.+
T Consensus 146 ~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~ 221 (250)
T 3ec3_A 146 FDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED--YATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALRE 221 (250)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT--THHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH--HHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHH
Confidence 11 1133455888898 88888875322 345678999974 3 46766653 33333344 6789999999
Q ss_pred HHHhcccCCC
Q 010886 359 VMEQNKLQEL 368 (498)
Q Consensus 359 fi~~~~~~~v 368 (498)
|++...-..+
T Consensus 222 Fv~~~~~Gkl 231 (250)
T 3ec3_A 222 FVMAFKKGKL 231 (250)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCCCc
Confidence 9987644433
No 161
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.16 E-value=5.3e-11 Score=102.57 Aligned_cols=100 Identities=15% Similarity=0.017 Sum_probs=78.6
Q ss_pred ecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch--------------------hhh
Q 010886 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LAT 200 (498)
Q Consensus 141 Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~--------------------~~~ 200 (498)
++.+.+......+++++|.||++||++|+...|.++++++.+. .+.+..|+++++. ...
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDG 91 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTC
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCc
Confidence 3344443333457899999999999999999999999999988 7899999986421 124
Q ss_pred HHHHhCCCCcccceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.++++++ |.++||++++. +|.. . .|.|..+.++|.+++.+.
T Consensus 92 ~~~~~~~------i~~~P~~~~id~~g~i----~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 92 SVWANFG------VTQQPAYAFVDPHGNV----D-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp HHHHHTT------CCSSSEEEEECTTCCE----E-EEESCCCHHHHHHHHHHH
T ss_pred HHHHHcC------CCCCceEEEECCCCCE----E-EEecCCCHHHHHHHHHHH
Confidence 4777777 99999999995 5543 3 688999999999999876
No 162
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.16 E-value=5.3e-11 Score=102.86 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=75.1
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch-------------------hhhHHHHhCCCCcc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-------------------LATHLAERKPIGQI 211 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~-------------------~~~~l~~~~~~~~~ 211 (498)
-.+++++|.||++||++|+...|.++++++++. .+.+..|+++++. ....++++++
T Consensus 22 ~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 96 (136)
T 1lu4_A 22 LQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYN---- 96 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTT----
T ss_pred hCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcC----
Confidence 357899999999999999999999999999998 7899999998621 1245788888
Q ss_pred cceeeeeEEEEe-CCCCcCCCCccccc---CCCCHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAF-PPGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f-~~g~~~~~~~~~Y~---G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. . .+. |..+.+.|.+++.+.
T Consensus 97 --i~~~P~~~lid~~G~i----~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 97 --VPWQPAFVFYRADGTS----T-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp --CCSSSEEEEECTTSCE----E-EECCSSSCCCHHHHHHHHHHC
T ss_pred --CCCCCEEEEECCCCcE----E-EEEcCCCccCHHHHHHHHHHH
Confidence 9999999999 45543 3 678 999999999999775
No 163
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.10 E-value=1.2e-11 Score=122.56 Aligned_cols=76 Identities=11% Similarity=-0.005 Sum_probs=61.4
Q ss_pred EEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc---hhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCC
Q 010886 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (498)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~---~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~ 232 (498)
.+|+||||||+||++++|.|+++|++++ .|||+.. ....++|++++ |+++||+.+ +|+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~g------I~~vPT~~i--~G~----- 260 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NGR----- 260 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTT------CCSTTEEEE--TTE-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcC------CcccCeEEE--CCE-----
Confidence 4699999999999999999999986652 6788721 11456999999 999999655 663
Q ss_pred cccccCCCCHHHHHHHHHHH
Q 010886 233 MTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 233 ~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.|.|.++.++|.+|+.-+
T Consensus 261 --~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 261 --TYTGVRSLEALAVASGYP 278 (291)
T ss_dssp --EEESCCCHHHHHHHTCCC
T ss_pred --EecCCCCHHHHHHHHCCC
Confidence 599999999999997543
No 164
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.10 E-value=1.1e-10 Score=101.74 Aligned_cols=88 Identities=9% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhh-ccceEEEEEcccch----------------------hhhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIR----------------------LATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-~~i~va~Vdc~~~~----------------------~~~~l~~~~~~ 208 (498)
.+++++|.||++||++|+.+.|.++++++.+. ..+.+..|+++... ....++++|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH- 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC-
Confidence 67899999999999999999999999999997 45889999997411 1235888888
Q ss_pred CcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHH
Q 010886 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv 249 (498)
|.++||++++ ++|.. ...+.|..+.+.|.+++
T Consensus 112 -----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 -----IITIPTSFLLNEKGEI----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp -----CCEESEEEEECTTCCE----EEEEESCCCHHHHHHHH
T ss_pred -----cCccCeEEEEcCCCcE----EEEEcCCcCHHHHHHhh
Confidence 9999999999 66654 34678999999998876
No 165
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.06 E-value=1.9e-10 Score=102.04 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=74.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCC---------------cccc--
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG---------------QIFF-- 213 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~---------------~~~~-- 213 (498)
.+++++|.||++||++|+...|.++++++++++. +.+..|+++........++++++. +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 5789999999999999999999999999999654 799999997543333333333221 1233
Q ss_pred eeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 214 I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 103 v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGY----RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTE----EEECCSCCCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 8899999888 56654 34688999999999999876
No 166
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.05 E-value=1e-10 Score=105.02 Aligned_cols=88 Identities=9% Similarity=0.079 Sum_probs=63.2
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHH---HhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeC-CC
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAA---LLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFP-PG 226 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~---~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~-~g 226 (498)
.+++++||.|||+||++|+.+.|.+.+.++ .++ ..+..||++++. .+++.+++ |+++||+++|. +|
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~--~~~~~~~~------v~~~PT~~f~~~~G 111 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHET--TDKNLSPD------GQYVPRIMFVDPSL 111 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCC--SCGGGCTT------CCCSSEEEEECTTS
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCc--hhhHhhcC------CCCCCEEEEECCCC
Confidence 679999999999999999999999987532 222 346667765322 12566666 99999999998 66
Q ss_pred CcCCCCcccccCC----------CCHHHHHHHHHHH
Q 010886 227 CKSSDCMTRFEGE----------LSVDAVTDWFATA 252 (498)
Q Consensus 227 ~~~~~~~~~Y~G~----------r~~~~Iv~fv~k~ 252 (498)
... ....|. .+.+.+++.+++.
T Consensus 112 ~~v----~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 112 TVR----ADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp CBC----TTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred CEE----EEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 542 244565 4566777777765
No 167
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.03 E-value=3.1e-10 Score=101.65 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=77.8
Q ss_pred ecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhh-hHHHHhCCCC---------
Q 010886 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERKPIG--------- 209 (498)
Q Consensus 141 Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~-~~l~~~~~~~--------- 209 (498)
++.+.+...--.+++++|.||++||++|+...|.++++++.+.+. +.+..|+++++... ....+++++.
T Consensus 22 ~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (165)
T 3or5_A 22 VDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPE 101 (165)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHH
T ss_pred CCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHH
Confidence 333333332235789999999999999999999999999999876 89999999864321 1122222110
Q ss_pred --ccc------ceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 210 --QIF------FRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 210 --~~~------~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+.| +|.++|+++++ ++|.. ...|.|..+.++|.+++.+.+
T Consensus 102 ~~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 102 LIRAFNGYIDGGITGIPTSFVIDASGNV----SGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp HHHHHHTTSTTCSCSSSEEEEECTTSBE----EEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHhhhhccCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 001 28999999888 56654 346779999999999998873
No 168
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.03 E-value=7.2e-11 Score=105.82 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=77.1
Q ss_pred EEecCCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccc---------------------
Q 010886 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------------------- 196 (498)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~--------------------- 196 (498)
..++.+.+......+++++|.||++||++|+...|.+++++++++.. +.|..|+++..
T Consensus 24 ~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 24 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKL 103 (164)
T ss_dssp EETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTS
T ss_pred CCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcc
Confidence 44555555544456789999999999999999999999999987543 55555554210
Q ss_pred ----hhhhHHHHhCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 197 ----RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 197 ----~~~~~l~~~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.....++++|+ |.++||++++ ++|.. ...+.|..+.++|.+++.+.
T Consensus 104 ~~~~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 104 PVVTDNGGTIAQNLN------ISVYPSWALIGKDGDV----QRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CEEECTTCHHHHHTT------CCSSSEEEEECTTSCE----EEEEESCCCHHHHHHHHHCT
T ss_pred eEEEcCchHHHHHcC------CCccceEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 01234777777 9999999999 66654 34577999999999999876
No 169
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.01 E-value=7.3e-10 Score=97.03 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=72.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh-hhH---------------------HHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATH---------------------LAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~-~~~---------------------l~~~~~~ 208 (498)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++++.. ... +++.|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD- 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC-
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC-
Confidence 5689999999999999999999999999999876 8999999985432 111 555566
Q ss_pred CcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|..+.+.+++.+.+.
T Consensus 109 -----i~~~P~~~lid~~G~i----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 -----IYATPVLYVLDKNKVI----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp -----CCSSCEEEEECTTCBE----EEESCCGGGHHHHHHHHHHH
T ss_pred -----cCCCCEEEEECCCCcE----EEecCCHHHHHHHHHHHHHH
Confidence 9999999999 56654 34566887777887777654
No 170
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.00 E-value=8.8e-10 Score=96.51 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=71.5
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHh-hcc-ceEEEEEcccchh----------------------hhHHHHhCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l-~~~-i~va~Vdc~~~~~----------------------~~~l~~~~~ 207 (498)
.+++++|.||++||++|+...|.+.++++.+ .+. +.+..|+++.+.. ...+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5689999999999999999999999999999 665 7899999885431 345888888
Q ss_pred CCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 208 ~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. .+... +.+.+.+++.+.
T Consensus 112 ------v~~~P~~~lid~~G~i------~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ------ILTLPTNILLSPTGKI------LARDI-QGEALTGKLKEL 144 (148)
T ss_dssp ------CCSSSEEEEECTTSBE------EEESC-CHHHHHHHHHHH
T ss_pred ------CCCcCEEEEECCCCeE------EEecC-CHHHHHHHHHHH
Confidence 9999999999 56644 33333 888888888776
No 171
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.99 E-value=2.2e-10 Score=96.61 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=67.0
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcc
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~ 234 (498)
..++.|++|||+.|+.+.|..+++++++. +.+.+||.++++. ++++|+ ++ +|||++|.+|+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~---l~~~yg------v~-VP~l~~~~dG~~------ 91 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEH---LTRLYN------DR-VPVLFAVNEDKE------ 91 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHH---HHHHST------TS-CSEEEETTTTEE------
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHH---HHHHhC------CC-CceEEEEECCEE------
Confidence 56899999999999999999999998875 8899999996654 888998 87 999999999864
Q ss_pred cccCCCCHHHHHHHH
Q 010886 235 RFEGELSVDAVTDWF 249 (498)
Q Consensus 235 ~Y~G~r~~~~Iv~fv 249 (498)
.+.|..+.+.|.+|+
T Consensus 92 v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 LCHYFLDSDVIGAYL 106 (107)
T ss_dssp EECSSCCCHHHHHHH
T ss_pred EEecCCCHHHHHHHh
Confidence 356888999998886
No 172
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.99 E-value=5.4e-10 Score=95.96 Aligned_cols=90 Identities=14% Similarity=0.047 Sum_probs=71.7
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc-------------------------hhhhHHHHhC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-------------------------RLATHLAERK 206 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~-------------------------~~~~~l~~~~ 206 (498)
.+++++|.||++||++|+...|.++++++.+...+.+..|++... .....++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 578999999999999999999999999999766778888864310 0123477777
Q ss_pred CCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 207 ~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
+ |.++||++++ ++|.. ...+.|..+.++|.+++.+
T Consensus 101 ~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 G------VRSYPTQAFIDKEGKL----VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp T------CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHH
T ss_pred C------cccCCeEEEECCCCcE----EEeecCCCcHHHHHHHHHh
Confidence 7 9999999999 66654 3467899999999998865
No 173
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.98 E-value=6.5e-10 Score=98.34 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=75.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh-------------------hhHHHHhCCCCcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------ATHLAERKPIGQI 211 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~-------------------~~~l~~~~~~~~~ 211 (498)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|++++.+. ...+++.|+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 100 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD---- 100 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC----
Confidence 4689999999999999999999999999999874 7899999875320 234788888
Q ss_pred cceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 101 --v~~~P~~~lid~~G~i----~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 101 --VSPLPTTFLINPEGKV----VKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --CCSSCEEEEECTTSEE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999998 56654 34577999999999999887
No 174
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.98 E-value=5.5e-11 Score=109.14 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=62.9
Q ss_pred CCCCcccccCCCcEEEEEecCCCCCCCCChH-HH--HHHHHHhhccceEEEEEcccchhhhHHHHhC--------CCCcc
Q 010886 143 SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRLATHLAERK--------PIGQI 211 (498)
Q Consensus 143 ~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p-~~--~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~--------~~~~~ 211 (498)
.+.|+....+++++||.|||+||++|+.++| .| .++++.+.+.+.+.+||.++++. +++.| +
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~---l~~~y~~~~q~~~g---- 101 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD---IDNIYMTVCQIILG---- 101 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH---HHHHHHHHHHHHHS----
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc---HHHHHHHHHHHHcC----
Confidence 4556666788999999999999999999999 34 57888888778899999996654 77666 7
Q ss_pred cceeeeeEEEEeC-CCC
Q 010886 212 FFRRGLPSLVAFP-PGC 227 (498)
Q Consensus 212 ~~I~~~PTl~~f~-~g~ 227 (498)
|.|+||+++|. +|.
T Consensus 102 --v~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 102 --RGGWPLNIIMTPGKK 116 (173)
T ss_dssp --CCCSSEEEEECTTSC
T ss_pred --CCCCcceeeECCCCC
Confidence 88999999997 554
No 175
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.97 E-value=1.4e-09 Score=95.99 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=75.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh--------------------hhHHHHhCCCCc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~--------------------~~~l~~~~~~~~ 210 (498)
.+++++|.||++||++|+...|.++++++.+.+. +.+..|+++.+.. ...+++.++
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL--- 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT---
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC---
Confidence 4689999999999999999999999999999875 7899999986531 124777777
Q ss_pred ccceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++. +|.. ...+.|..+.+.|.+++.+.
T Consensus 106 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 106 ---INGIPRFILLDRDGKI----ISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp ---CCSSCCEEEECTTSCE----EESSCCCTTCHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCCeE----EEccCCCCCHHHHHHHHHHH
Confidence 99999999997 5654 23566888999999999887
No 176
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.96 E-value=1.5e-08 Score=104.34 Aligned_cols=202 Identities=12% Similarity=0.113 Sum_probs=119.4
Q ss_pred EEEecC-CCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
|..+++ ++++. +.+++.++|.||+++|.. ..+.|.++|..+++.+.++.+.+. ++++++ |++
T Consensus 120 v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~~~F~~~~~~-------~~~~~~------v~~ 182 (382)
T 2r2j_A 120 IQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDDCAFLSAFGD-------VSKPER------YSG 182 (382)
T ss_dssp CEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTTCEEEEEESC-------C--------------
T ss_pred ceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhccceEEEEehh-------hHHhhC------CCC
Confidence 455643 56877 777889999999998653 367899999999998888888874 556667 889
Q ss_pred eeEEEEeCCCCcCCCCcccccCCC-CHHHHHHHHHHHhhcCCcccccccchhhhhhhhhcCCCcEEEEEEecCCCCCcHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEGEL-SVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPF 295 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G~r-~~~~Iv~fv~k~~~~~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~ 295 (498)
+| +++++.+.. .....|.|.+ +.++|.+|+... ..|....++..+ ...+.... ..++++++...+......
T Consensus 183 ~p-i~~~~~~~~--~~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~ 254 (382)
T 2r2j_A 183 DN-IIYKPPGHS--APDMVYLGAMTNFDVTYNWIQDK--CVPLVREITFEN-GEELTEEG--LPFLILFHMKEDTESLEI 254 (382)
T ss_dssp CE-EEEECSSSS--SCCEECCSCTTCHHHHHHHHHHH--HSCSSEECCHHH-HHHHHTTC--CCEEEEEECTTCCHHHHH
T ss_pred Cc-eEECCCCCC--CcCcccCCCCCCHHHHHHHHHhc--ccCceEecChhh-HHHHhcCC--CcEEEEEecCCchHHHHH
Confidence 99 666665321 1245899998 999999999987 467665566554 34444321 224455554321111112
Q ss_pred H-H---HHHHhccccceEEEEEecccccHHHHHHcCCC--CCCEEEEEeCCCCceeee---cCCCChhHHHHHHHhcccC
Q 010886 296 V-R---QISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY---YGSFNNSRLSEVMEQNKLQ 366 (498)
Q Consensus 296 ~-~---~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~--~~Pti~lfk~~~~~~~~y---~g~~~~~~L~~fi~~~~~~ 366 (498)
+ . ..+..+++.+.|+.+... ....+++.||++ ..|+|+++.. +.. ..| .+.++.+.|.+|++...-.
T Consensus 255 ~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~~~~~P~i~i~~~-~~~-y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 255 FQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKTPADCPVIAIDSF-RHM-YVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp HHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCCGGGCSEEEEECS-SCE-EECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCCccCCCEEEEEcc-hhc-CCCCccccccCHHHHHHHHHHHHCC
Confidence 2 2 234456677888888633 235678999997 5899988754 221 222 3445678899999875444
Q ss_pred CC
Q 010886 367 EL 368 (498)
Q Consensus 367 ~v 368 (498)
.+
T Consensus 331 kl 332 (382)
T 2r2j_A 331 KL 332 (382)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 177
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.93 E-value=2.2e-09 Score=94.84 Aligned_cols=93 Identities=14% Similarity=-0.005 Sum_probs=73.5
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccch--------------------hhhHHHHhCCCCc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (498)
.+++++|.||++||++|+...|.+.++++.+++. +.+..|+.+.+. ....+++.++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG--- 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT---
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC---
Confidence 5789999999999999999999999999999875 677766643110 1234777777
Q ss_pred ccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHHhh
Q 010886 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (498)
Q Consensus 211 ~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~ 254 (498)
|.++||++++ ++|.. ...|.|..+.+.|.+++.+.+.
T Consensus 104 ---i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 104 ---TQVYPTSVLIGKKGEI----LKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp ---CCSSSEEEEECSSSCC----CEEEESSCCHHHHHHHHHHHHH
T ss_pred ---CCccCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999999 55654 3468899999999999988743
No 178
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.91 E-value=2.5e-09 Score=94.42 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=73.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhh-------------------hHHHHhCCCCcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------THLAERKPIGQI 211 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~-------------------~~l~~~~~~~~~ 211 (498)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++.+... ..+++.|+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 102 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYG---- 102 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcC----
Confidence 4689999999999999999999999999999876 78999998854321 14677777
Q ss_pred cceeeeeEEEEe-CCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|.. +.+.|.+++.+.
T Consensus 103 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 103 --VKGMPTSFLIDRNGKV----LLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp --CCSSSEEEEECTTSBE----EEEEESCCTTTHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCCE----EEEEccCCCcCHHHHHHHHHHH
Confidence 9999998888 56654 23566754 558999999887
No 179
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.88 E-value=1.4e-09 Score=96.29 Aligned_cols=90 Identities=11% Similarity=0.096 Sum_probs=70.0
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch--------------------hhhHHHHhCCCCc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (498)
-.+++++|.||++||++|+...|.+++++++ +.+.+..|+++++. ....+++.++
T Consensus 40 ~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 114 (156)
T 1kng_A 40 FKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG--- 114 (156)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT---
T ss_pred hCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC---
Confidence 3478999999999999999999999999876 55788888875321 1234777777
Q ss_pred ccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 115 ---v~~~P~~~~id~~G~i----~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 115 ---VYGVPETFVVGREGTI----VYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp ---CCSSCEEEEECTTSBE----EEEEESCCCHHHHHHTHHHH
T ss_pred ---cCccCeEEEEcCCCCE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999976665 66654 23577999999999998776
No 180
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.87 E-value=4.1e-09 Score=94.67 Aligned_cols=88 Identities=9% Similarity=0.086 Sum_probs=72.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc------------------cchhh--------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------DIRLA-------------- 199 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~------------------~~~~~-------------- 199 (498)
.+++++|.||++||++|+...|.+.+++++++ .+.|..|+++ ++...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 46899999999999999999999999999998 7889999987 33210
Q ss_pred -----hHHHHhCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCC-CHHHHHHHHHHH
Q 010886 200 -----THLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL-SVDAVTDWFATA 252 (498)
Q Consensus 200 -----~~l~~~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r-~~~~Iv~fv~k~ 252 (498)
..+++.|+ |.++||++++ ++|.. .+.|.. +.+.|.+++.+.
T Consensus 115 ~~~d~~~~~~~~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFN------VRSIDYIVIMDKSSNV------LYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTT------CCSSSEEEEEETTCCE------EEEEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhC------CCCceEEEEEcCCCcE------EEeCCCCCHHHHHHHHHHH
Confidence 24677777 9999999999 56654 348888 899999988765
No 181
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.86 E-value=3.9e-09 Score=93.59 Aligned_cols=88 Identities=14% Similarity=0.082 Sum_probs=69.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh----------------------hhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~----------------------~~~l~~~~~~ 208 (498)
.+++++|.||++||++|+...|.++++++.+.+. +.+..|++++... ...+++.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC- 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC-
Confidence 4689999999999999999999999999999876 7999999985321 355888888
Q ss_pred CcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++||++++ ++|.. .+.. .+.++|.+++.+.
T Consensus 107 -----v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 -----IVGFPHIILVDPEGKI------VAKE-LRGDDLYNTVEKF 139 (152)
T ss_dssp -----CCSSCEEEEECTTSEE------EEEC-CCTTHHHHHHHHH
T ss_pred -----CCcCCeEEEECCCCeE------EEee-CCHHHHHHHHHHH
Confidence 9999999999 56654 2221 2456777777665
No 182
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.86 E-value=3.3e-09 Score=93.95 Aligned_cols=87 Identities=18% Similarity=0.151 Sum_probs=71.8
Q ss_pred CcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc--cc----------------------hhhhHHHHhCCCC
Q 010886 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DI----------------------RLATHLAERKPIG 209 (498)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~--~~----------------------~~~~~l~~~~~~~ 209 (498)
++++|.||++||++|+...|.+.++++++ .+.+..|+++ +. .....+++.|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK-- 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS--
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC--
Confidence 89999999999999999999999999999 6788999992 11 02345777787
Q ss_pred cccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 ~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|..+.++|.+++.+.
T Consensus 107 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 107 ----VLGQPWTFVVDREGKV----VALFAGRAGREALLDALLLA 142 (154)
T ss_dssp ----BCSSCEEEEECTTSEE----EEEEESBCCHHHHHHHHHHT
T ss_pred ----CCcccEEEEECCCCCE----EEEEcCCCCHHHHHHHHHhc
Confidence 9999998888 56654 34678999999999999887
No 183
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.85 E-value=1.8e-09 Score=97.34 Aligned_cols=89 Identities=17% Similarity=0.106 Sum_probs=68.4
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch--------------------hhhHHHHhCCCCc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (498)
..+++++|.||++||++|+...|.+++++++ .+.+..|+++++. ....++++|+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG--- 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT---
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC---
Confidence 4688999999999999999999999999876 4677888854221 1234777777
Q ss_pred ccceeeeeE-EEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 IFFRRGLPS-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PT-l~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++|+ +++.++|.. ...+.|..+.+.+.+++.+.
T Consensus 123 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 123 ---VYGAPETFLIDGNGII----RYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp ---CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHTTHHH
T ss_pred ---ccccCEEEEECCCCeE----EEEEeCCCCHHHHHHHHHHH
Confidence 999995 555566754 24577999999999988776
No 184
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.83 E-value=7.9e-10 Score=89.70 Aligned_cols=73 Identities=23% Similarity=0.211 Sum_probs=60.3
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y 236 (498)
++.|++|||+.|+.++|.+++++..+ +.+||.++++. ++++|+ ++ +||+++ .+|+. .
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~---l~~~~g------~~-vPtl~~-~~G~~------v- 59 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAA---LESAYG------LR-VPVLRD-PMGRE------L- 59 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHH---HHHHHT------TT-CSEEEC-TTCCE------E-
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHH---HHHHhC------CC-cCeEEE-ECCEE------E-
Confidence 68899999999999999998776432 68999997654 889998 98 999988 77754 2
Q ss_pred cCCCCHHHHHHHHHHH
Q 010886 237 EGELSVDAVTDWFATA 252 (498)
Q Consensus 237 ~G~r~~~~Iv~fv~k~ 252 (498)
.|..+.+.|.+|+.+.
T Consensus 60 ~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 60 DWPFDAPRLRAWLDAA 75 (87)
T ss_dssp ESCCCHHHHHHHHHTC
T ss_pred eCCCCHHHHHHHHHHH
Confidence 2888999999998764
No 185
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.83 E-value=6.7e-09 Score=95.07 Aligned_cols=97 Identities=11% Similarity=0.116 Sum_probs=72.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-c------eEEEEEccc-c-hhhhHHHHhCCCC------------c
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-A------NTGMVELGD-I-RLATHLAERKPIG------------Q 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i------~va~Vdc~~-~-~~~~~l~~~~~~~------------~ 210 (498)
.++++||.||++||++|+...|.++++++++++. + .|..|++++ + ......++++++. +
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4689999999999999999999999999999876 7 999999986 2 2223344444320 0
Q ss_pred ---ccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 ---IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ---~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.|.|.++|+++++ ++|.. ...|.|..+.++|.+++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRP----AAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCE----EEEECSCCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 1348899976655 56654 34677999999999999876
No 186
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.82 E-value=4.2e-09 Score=93.76 Aligned_cols=92 Identities=10% Similarity=0.016 Sum_probs=72.3
Q ss_pred CCCcEEEEEecCCCCCCCC-ChHHHHHHHHHhhcc-ceEEEEEcc-------cchh------------------hhH---
Q 010886 152 DSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-ANTGMVELG-------DIRL------------------ATH--- 201 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~-l~p~~~~~A~~l~~~-i~va~Vdc~-------~~~~------------------~~~--- 201 (498)
.+++++|.||++||++|+. +.|.++++++++++. +.+..|+++ .... ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4789999999999999999 599999999999876 788888873 0000 111
Q ss_pred ---HHHhCCCCcccceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 202 ---LAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 202 ---l~~~~~~~~~~~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
++++|+ |.++|+++++. +|.. ...|.|..+.+.|.+++.+.+
T Consensus 109 ~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYR------LEGTPSIILADRKGRI----RQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTT------CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHHHHHHH
T ss_pred hhhHHHhcc------cCccceEEEECCCCcE----EEEecCcCCHHHHHHHHHHHH
Confidence 666666 99999999995 5544 346679999999999998873
No 187
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.81 E-value=3.8e-09 Score=92.67 Aligned_cols=71 Identities=10% Similarity=0.030 Sum_probs=59.5
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc--cceEEEEEcccch---------------------hhhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~--~i~va~Vdc~~~~---------------------~~~~l~~~~~~ 208 (498)
.+++++|.||++||++|+...|.++++++++++ .+.+..|+++++. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD- 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC-
Confidence 468999999999999999999999999999984 5789999988532 1245888888
Q ss_pred CcccceeeeeEEEEeC--CCCc
Q 010886 209 GQIFFRRGLPSLVAFP--PGCK 228 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f~--~g~~ 228 (498)
|.++||++++. +|..
T Consensus 106 -----v~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 106 -----VKSIPTLVGVEADSGNI 122 (144)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCcE
Confidence 99999999995 6654
No 188
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.81 E-value=1.5e-08 Score=90.08 Aligned_cols=92 Identities=15% Similarity=0.003 Sum_probs=72.1
Q ss_pred CCCcEEEEEecCCCCCCCCC-hHHHHHHHHHhhcc-ceEEEEEccc-------chhh------------------h----
Q 010886 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-ANTGMVELGD-------IRLA------------------T---- 200 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~-i~va~Vdc~~-------~~~~------------------~---- 200 (498)
.+++++|.||++||++|+.. .|.++++++++++. +.+..|+++. .... .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999997 99999999999854 7888888631 0000 0
Q ss_pred -HHHHhCCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 201 -HLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 201 -~l~~~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
.+++.|+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 107 ~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQ------MRGTPSLLLIDKAGDL----RAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTSEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCCCCEEEEECCCCCE----EEEEeCCCCHHHHHHHHHHHh
Confidence 3667777 9999999988 45644 346779999999999998873
No 189
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.80 E-value=1.3e-09 Score=99.38 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=56.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCK 228 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~ 228 (498)
++++++|.|+|+||++|+.+.|.++++++... .+.+..||.++++ +++.+|. ...|+++||+++|.+|+.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~---~~~~~~~---~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAE---DDLRQRL---ALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHH---HHTTTTT---TCSSCCSSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCH---HHHHHHH---HcCCCCcCeEEEECCCCC
Confidence 46789999999999999999999999998764 5789999988554 3666663 112889999999998643
No 190
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.77 E-value=6e-09 Score=91.70 Aligned_cols=71 Identities=8% Similarity=0.031 Sum_probs=59.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhh--ccceEEEEEcccch---------------------hhhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~--~~i~va~Vdc~~~~---------------------~~~~l~~~~~~ 208 (498)
.+++++|.||++||++|+...|.+++++++++ +.+.+..|+++++. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN- 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT-
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC-
Confidence 46899999999999999999999999999998 35789999988532 1346888888
Q ss_pred CcccceeeeeEEEEeC--CCCc
Q 010886 209 GQIFFRRGLPSLVAFP--PGCK 228 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f~--~g~~ 228 (498)
|.++||++++. +|..
T Consensus 106 -----v~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 106 -----VESIPTLIGVDADSGDV 122 (146)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCeE
Confidence 99999999996 6654
No 191
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.77 E-value=7.4e-09 Score=91.52 Aligned_cols=91 Identities=10% Similarity=0.176 Sum_probs=70.7
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccch-h-------------------hhHHHHhCCCCc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIR-L-------------------ATHLAERKPIGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~-~-------------------~~~l~~~~~~~~ 210 (498)
.+++++|.||++||++|+...|.++++++.+.+ .+.+..|+++.+. . ...+++.|+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG--- 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC---
Confidence 568999999999999999999999999999987 4789999988641 1 123667777
Q ss_pred ccceeeeeEEEEe-CCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|.. +.+++.+++.+.
T Consensus 104 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 104 ---TTGVPETFVIDRHGVI----LKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---CCSBCEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCCCCeEEEECCCCcE----EEEEcCCCccccHHHHHHHHHH
Confidence 9999976666 56654 23566765 667899988764
No 192
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.76 E-value=6.2e-09 Score=91.14 Aligned_cols=92 Identities=11% Similarity=0.136 Sum_probs=64.8
Q ss_pred CCcEEEEEecCCCCCCCCChHHHHH---HHHHhhcc-ceEEEEEcccchhh-hHHHHhCC--------------CCcccc
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRLA-THLAERKP--------------IGQIFF 213 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~---~A~~l~~~-i~va~Vdc~~~~~~-~~l~~~~~--------------~~~~~~ 213 (498)
+++++|.|||+||++|+...|.+.+ +.+.+++. +.+..|+.+++... ....++++ +.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5899999999999999999999999 99998654 78888998855321 11111111 123455
Q ss_pred eeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHH
Q 010886 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (498)
Q Consensus 214 I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~ 250 (498)
|.++||++++.+++.. .+.+ .+.++|.+|+.
T Consensus 111 v~~~P~~~lid~~G~i-----~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTV-----LLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CTTCSEEEEECTTCBE-----EEEE-ECHHHHHHHHH
T ss_pred CCcCCeEEEECCCCcE-----EecC-CCHHHHHHHHh
Confidence 9999999999554332 4443 35788888774
No 193
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.73 E-value=1.1e-08 Score=91.25 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccc----------------hhhhHHHHhCCCCcccce
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI----------------RLATHLAERKPIGQIFFR 214 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~----------------~~~~~l~~~~~~~~~~~I 214 (498)
.+++++|.||++||++|+...|.++++++++.+ .+.+..|++++. .....+++.|+ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------v 113 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYG------A 113 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTT------C
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhC------C
Confidence 568999999999999999999999999999974 478999999851 01245888888 9
Q ss_pred eeeeEEEEe-CCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 215 RGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 215 ~~~PTl~~f-~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
.++|+++++ ++|.. ...+.|.. +..++++.+.+.
T Consensus 114 ~~~P~~~lid~~G~i----~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 114 NRLPDTFIVDRKGII----RQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp CSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTT
T ss_pred CCcceEEEEcCCCCE----EEEEeCCCccchHHHHHHHHhh
Confidence 999997777 55644 34566754 566777776654
No 194
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.73 E-value=7.5e-09 Score=90.53 Aligned_cols=71 Identities=10% Similarity=0.117 Sum_probs=59.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhh--ccceEEEEEcccch---------------------hhhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~--~~i~va~Vdc~~~~---------------------~~~~l~~~~~~ 208 (498)
.+++++|.||++||++|+...|.+++++++++ +.+.+..|+++.+. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG- 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT-
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC-
Confidence 46799999999999999999999999999997 35788899988542 1345778887
Q ss_pred CcccceeeeeEEEEeC--CCCc
Q 010886 209 GQIFFRRGLPSLVAFP--PGCK 228 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f~--~g~~ 228 (498)
|.++||++++. +|..
T Consensus 106 -----v~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 106 -----VESIPTLITINADTGAI 122 (144)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCeE
Confidence 99999999997 5643
No 195
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.72 E-value=9.5e-09 Score=89.63 Aligned_cols=94 Identities=15% Similarity=0.193 Sum_probs=68.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHH---HHHHhhcc-ceEEEEEcccchh-hhHHHHhCCC--------------Cccc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRL-ATHLAERKPI--------------GQIF 212 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~---~A~~l~~~-i~va~Vdc~~~~~-~~~l~~~~~~--------------~~~~ 212 (498)
.+++++|.||++||++|+...|.+.+ +++.+++. +.+..|+++++.. .....+++++ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46899999999999999999999998 88888764 7899999885432 1222222221 1245
Q ss_pred ceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+|.++||++++. +|.. .+ +..+.++|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i------~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRV------IL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBE------EE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCE------Ee-cCCCHHHHHHHHHHH
Confidence 599999999995 5543 33 668899999988754
No 196
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.66 E-value=2.8e-08 Score=88.38 Aligned_cols=88 Identities=13% Similarity=-0.013 Sum_probs=68.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhh--------------------HHHHhCCCCc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT--------------------HLAERKPIGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~--------------------~l~~~~~~~~ 210 (498)
.+++++|.||++||++|+...|.+.++++++++. +.|..|++++..... .+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN--- 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT---
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC---
Confidence 3679999999999999999999999999999876 789999998653210 1566666
Q ss_pred ccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHH
Q 010886 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (498)
Q Consensus 211 ~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv 249 (498)
|.++||++++ ++|.. ...+.|..+.++.+.-.
T Consensus 111 ---v~~~P~~~lid~~G~i----~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 111 ---VTNLPSVFLVNRNNEL----SARGENIKDLDEAIKKL 143 (152)
T ss_dssp ---CCSCSEEEEEETTTEE----EEETTTCSCHHHHHHHH
T ss_pred ---cccCceEEEECCCCeE----EEecCCHHHHHHHHHHH
Confidence 9999999999 56654 34567888877665544
No 197
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.65 E-value=2.5e-08 Score=89.52 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=73.7
Q ss_pred CCCcccc----cCCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 144 EDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 144 ~nF~~~v----~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
.+|++.+ +.++++||.||++||..|+.|...- .++++.++....+.++|.++. ....++++|+ |.+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~-~~~~l~~~y~------v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSE-EGQRYIQFYK------LGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSH-HHHHHHHHHT------CCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCH-hHHHHHHHcC------CCC
Confidence 3555655 5589999999999999999997554 566777766677888898643 3356888888 999
Q ss_pred eeEEEEeCCC-CcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPG-CKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g-~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+||++++.+. +.. ...+.| .+++++++++.+.
T Consensus 102 ~P~~~fld~~~G~~---l~~~~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 102 FPYVSILDPRTGQK---LVEWHQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp SSEEEEECTTTCCC---CEEESS-CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcE---eeecCC-CCHHHHHHHHHHH
Confidence 9999999653 321 234555 8999999998776
No 198
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=7.3e-08 Score=85.01 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=69.6
Q ss_pred CCCcEEEEEecCCCCC--CCCChHHHHHHHHHh-hcc-ceEEEEEcccchh----------------------hhHHHHh
Q 010886 152 DSKPWLIQVYSDGSYL--CGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAER 205 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~--C~~l~p~~~~~A~~l-~~~-i~va~Vdc~~~~~----------------------~~~l~~~ 205 (498)
.+++++|.||++||++ |+...|.+.++++++ ++. +.+..|++++++. ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 999999999999999 665 7899999886531 2357777
Q ss_pred CCCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 206 ~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|+ |.++|+++++ ++|.. .+.. .+.+.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YS------IYKIPANILLSSDGKI------LAKN-LRGEELKKKIENI 146 (150)
T ss_dssp TT------CCSSSEEEEECTTSBE------EEES-CCHHHHHHHHHHH
T ss_pred cC------CCccCeEEEECCCCEE------EEcc-CCHHHHHHHHHHH
Confidence 77 9999999999 56654 3333 2777888877665
No 199
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.65 E-value=4.1e-08 Score=100.02 Aligned_cols=92 Identities=11% Similarity=-0.047 Sum_probs=74.3
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccch------------------------hhhHHHHhC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR------------------------LATHLAERK 206 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~------------------------~~~~l~~~~ 206 (498)
.++++||.||++||++|+...|.++++++++++. +.|..|+|++.. ....++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4789999999999999999999999999999874 789999886310 113477777
Q ss_pred CCCcccceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 207 ~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 161 g------V~~~Pt~~lID~~G~I----v~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 R------NRYWPAEYLIDATGTV----RHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp T------CCEESEEEEECTTSBE----EEEEESBCCHHHHHHHHHHHH
T ss_pred C------CCccCEEEEEeCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 7 9999998888 56654 346779999999999998764
No 200
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.65 E-value=5.4e-08 Score=89.38 Aligned_cols=90 Identities=9% Similarity=0.066 Sum_probs=70.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc--------------------------hhhhHHHHh
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------------------------RLATHLAER 205 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~--------------------------~~~~~l~~~ 205 (498)
.+++++|.||++||++|+...|.++++++++.+.+.+..|+++.. .....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 358999999999999999999999999999987688899998421 012347777
Q ss_pred CCCCcccceeeeeEEEEe-CCCCcCCCCccccc----------CCCCHHHHHHHHHHHh
Q 010886 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFE----------GELSVDAVTDWFATAI 253 (498)
Q Consensus 206 ~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~----------G~r~~~~Iv~fv~k~~ 253 (498)
|+ |.++|+++++ ++|.. .+. |..+.++|.+.+.+.+
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~~~g~~~~~~l~~~i~~ll 158 (188)
T 2cvb_A 112 YR------ALRTPEVFLFDERRLL------RYHGRVNDNPKDPSKVQSHDLEAAIEALL 158 (188)
T ss_dssp TT------CCEESEEEEECTTCBE------EEEECSSSCTTCGGGCCCCHHHHHHHHHH
T ss_pred cC------CCCCCeEEEECCCCcE------EEEEecCCccccccccCHHHHHHHHHHHH
Confidence 77 9999999999 55643 333 4447889999988764
No 201
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.63 E-value=4.5e-08 Score=90.34 Aligned_cols=91 Identities=8% Similarity=-0.035 Sum_probs=70.9
Q ss_pred CcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccch--------------------------hhhHHHHhC
Q 010886 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------------LATHLAERK 206 (498)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~--------------------------~~~~l~~~~ 206 (498)
.+++|.||++||++|+...|.++++++++.+. +.+..|+++... ....+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 35999999999999999999999999999875 889999985210 123467777
Q ss_pred CCCcccceeeeeEEEEe-CCCCcCCCCccc---------ccCCCCHHHHHHHHHHHhh
Q 010886 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTR---------FEGELSVDAVTDWFATAIL 254 (498)
Q Consensus 207 ~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~---------Y~G~r~~~~Iv~fv~k~~~ 254 (498)
+ |.++|+++++ ++|... .. +.|..+.++|.+.+.+.+.
T Consensus 127 ~------v~~~P~~~lid~~G~i~----~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 127 D------AACTPDFYIFDRDLKCV----YRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp T------CCEESEEEEEETTCBEE----EEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred C------CCCCCeEEEEcCCCeEE----EccccCcccccccCccCHHHHHHHHHHHHc
Confidence 7 9999999999 566542 12 4577789999999988643
No 202
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.63 E-value=2.7e-08 Score=89.98 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=58.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc--cceEEEEEcccchh---------------------hhHHHHhCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRL---------------------ATHLAERKPI 208 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~--~i~va~Vdc~~~~~---------------------~~~l~~~~~~ 208 (498)
.++++||.||++||++|+...|.++++++++++ .+.|..|+++++.. ...+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS- 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC-
Confidence 468999999999999999999999999999986 57888888885521 146888888
Q ss_pred CcccceeeeeEEEEeCC
Q 010886 209 GQIFFRRGLPSLVAFPP 225 (498)
Q Consensus 209 ~~~~~I~~~PTl~~f~~ 225 (498)
|.++||++++.+
T Consensus 126 -----v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 -----VESIPTLIGLNA 137 (165)
T ss_dssp -----CCSSSEEEEEET
T ss_pred -----CCCCCEEEEEeC
Confidence 999999999974
No 203
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.61 E-value=6.5e-08 Score=88.56 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=73.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccc--hhhhHHHHhCCCC-------------cccce-
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI--RLATHLAERKPIG-------------QIFFR- 214 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~--~~~~~l~~~~~~~-------------~~~~I- 214 (498)
.+++++|.||++||++|+...|.++++++++++ .+.+..|+++.+ ......++++++. +.|++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 467999999999999999999999999999974 478999998854 2335577777731 12223
Q ss_pred ---eeeeEEEEe-CCCCcCCCCcccccCCCC--HHHHHHHHHHHh
Q 010886 215 ---RGLPSLVAF-PPGCKSSDCMTRFEGELS--VDAVTDWFATAI 253 (498)
Q Consensus 215 ---~~~PTl~~f-~~g~~~~~~~~~Y~G~r~--~~~Iv~fv~k~~ 253 (498)
.++|+++++ ++|.. ...|.|..+ .+++.+++.+.+
T Consensus 139 ~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCE----IATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TCCSSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCE----EEEEecCCccCHHHHHHHHHHHh
Confidence 389999998 56654 235677764 788999988763
No 204
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.58 E-value=4.1e-08 Score=89.64 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=67.3
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch--------------------hhhHHHHhCCCCcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~--------------------~~~~l~~~~~~~~~ 211 (498)
.+++++|.||++||++|+...|.+++++++ .+.+..|+++++. ....+++.|+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 129 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG---- 129 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC----
Confidence 478999999999999999999999999876 3677778764221 1133566666
Q ss_pred cceeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.++|+++++ ++|.. ...+.|..+.+.+.+++.+.
T Consensus 130 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 130 --VYGAPETYLIDKQGII----RHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp --CCSSCEEEEECTTCBE----EEEEESCCCHHHHHHHTHHH
T ss_pred --CCCCCeEEEECCCCeE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999977777 55654 34667999999999988776
No 205
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.57 E-value=3e-08 Score=101.76 Aligned_cols=63 Identities=25% Similarity=0.510 Sum_probs=53.3
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHhhcCCCCCCC------hHHHHHHHHhhhhHcCChhhhhcccc
Q 010886 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDV 98 (498)
Q Consensus 36 ~~d~y~ilgv~~~a~~~~ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~ay~~L~d~~~r~~yd~ 98 (498)
..++|++||+.+.++.++++++|+++++++|||+.+. +.++|.+|.+||++|+||++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 3489999999999999999999999999999998764 35579999999999999999999997
No 206
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.99 E-value=6.8e-09 Score=90.47 Aligned_cols=70 Identities=16% Similarity=0.098 Sum_probs=54.6
Q ss_pred CC-cEEEEEecCCCCCCCCChHHHHHHHHHhh---ccceEEEEEcccchh----------------------hhHHHHhC
Q 010886 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRL----------------------ATHLAERK 206 (498)
Q Consensus 153 ~~-~~lV~FYapwC~~C~~l~p~~~~~A~~l~---~~i~va~Vdc~~~~~----------------------~~~l~~~~ 206 (498)
++ +++|.||++||++|+...|.+++++++++ ..+.+..|+++++.. ...++++|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 99999999999999999999999999984 346788888774421 02355666
Q ss_pred CCCcccceeeeeEEEEeC-CCCc
Q 010886 207 PIGQIFFRRGLPSLVAFP-PGCK 228 (498)
Q Consensus 207 ~~~~~~~I~~~PTl~~f~-~g~~ 228 (498)
+ |.++||++++. +|..
T Consensus 105 ~------v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 105 G------ITGIPALVIVKKDGTL 121 (143)
Confidence 6 99999999997 5654
No 207
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1.1e-06 Score=87.48 Aligned_cols=161 Identities=11% Similarity=0.130 Sum_probs=107.1
Q ss_pred cccchhhhhhhhhcCCCc-EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHK-VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~-~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
++..+ +++.+.. .++ ++|.|+++-| ....|.+..++..+.+.+.++.+.........++++|+|.++||+++|
T Consensus 22 lt~~~-f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 22 LTPKS-FDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp CCHHH-HHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred eCHHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 55444 5666632 233 5555666532 223566777888887777888886433235789999999999999999
Q ss_pred eCCC----------------CceeeecCCCChhHHHHHHHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEEEEE
Q 010886 338 KDPG----------------VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVIL 401 (498)
Q Consensus 338 k~~~----------------~~~~~y~g~~~~~~L~~fi~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~ 401 (498)
+++. ..+..|.|.++.+.|.+|+.+..-+.+.++++...++...... . ..+|++
T Consensus 99 ~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~-----~-----~~~vi~ 168 (298)
T 3ed3_A 99 RPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKS-----P-----KLSVVL 168 (298)
T ss_dssp ECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSC-----S-----SEEEEE
T ss_pred ECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcC-----C-----ceEEEE
Confidence 9864 1367899999999999999988767777776655444322210 1 256777
Q ss_pred eCCCchhhHHHHHHHHHHHHhhcccccccccccCCCchHHHHhccCCceEEEEEeCccCch
Q 010886 402 AGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDV 462 (498)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~wvd~~~q~~ 462 (498)
+...+. ....++.+|. .|++ .+.|+.++...-+.
T Consensus 169 fs~~~~----~~~~f~~~A~----------------------~~~~-~~~F~~v~~~~~a~ 202 (298)
T 3ed3_A 169 FSKQDK----ISPVYKSIAL----------------------DWLG-KFDFYSISNKKLKQ 202 (298)
T ss_dssp EESSSS----CCHHHHHHHH----------------------HTBT-TEEEEEEEGGGCCC
T ss_pred EcCCCc----chHHHHHHHH----------------------Hhhc-CcEEEEEcchHhhh
Confidence 754332 2245677777 6776 48999998665443
No 208
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.53 E-value=4.6e-08 Score=88.00 Aligned_cols=97 Identities=12% Similarity=-0.007 Sum_probs=74.5
Q ss_pred CCCcEEEEEecCCCCC-CCCChHHHHHHHHHhhc----cceEEEEEcccchh--h-----------------------hH
Q 010886 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDIRL--A-----------------------TH 201 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~----~i~va~Vdc~~~~~--~-----------------------~~ 201 (498)
.+++++|.||++||++ |+...|.++++++++++ .+.|..|+++.++. + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999998 99999999999998874 57899999874311 0 34
Q ss_pred HHHhCCC---------CcccceeeeeEEEEeCCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 202 LAERKPI---------GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 202 l~~~~~~---------~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
+++.+++ .+.|.|.+.|+++++.+|.. ...|.|.. +.+.|.+.+++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i----~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRL----VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEE----EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEE----EEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 33466889999999995543 34567777 889999888753
No 209
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.53 E-value=4e-08 Score=105.37 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=75.9
Q ss_pred EecCCCCccccc-CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeee
Q 010886 140 VVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (498)
Q Consensus 140 ~Lt~~nF~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~P 218 (498)
.++++.++.+.+ +.+..++.|++|||++|+.+.|.++++|.... .+.+.+||.++++ +++++++ |+++|
T Consensus 103 ~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~---~~~~~~~------i~svP 172 (521)
T 1hyu_A 103 KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQ---NEITERN------VMGVP 172 (521)
T ss_dssp CSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCH---HHHHHTT------CCSSS
T ss_pred CCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhH---HHHHHhC------CCccC
Confidence 366666655542 45567889999999999999999999998865 7899999999554 4999999 99999
Q ss_pred EEEEeCCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
|+++ +|+. ...|..+.+.|.+|+.+
T Consensus 173 t~~i--~g~~------~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 173 AVFV--NGKE------FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EEEE--TTEE------EEESCCCHHHHHHHHCC
T ss_pred EEEE--CCEE------EecCCCCHHHHHHHHhh
Confidence 9977 7654 45599999999999754
No 210
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.53 E-value=1.1e-08 Score=80.98 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=45.4
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCC
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~ 227 (498)
++.||+|||++|+.+.|.++++++++...+.+..||.+ ....++++++| |+++||+++ +|.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~g------v~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTD--KARIAEAEKAG------VKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTC--SSTHHHHHHHT------CCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCC--hhhHHHHHHcC------CCcCCEEEE--CCE
Confidence 67899999999999999999987765433444444442 12234788888 999999977 664
No 211
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.52 E-value=5.2e-07 Score=77.97 Aligned_cols=101 Identities=20% Similarity=0.226 Sum_probs=75.8
Q ss_pred cCCcccc--cccchhhhhhhhhcCCCcEEEEEEecC-CCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCC
Q 010886 255 KLPRIFY--YTKESMGKNFLAKTGPHKVKVIFFSKT-GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESA 331 (498)
Q Consensus 255 ~~P~~~~--it~~~~~~~fl~~~~~~~~~vl~f~~~-~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~ 331 (498)
.+|+... |++.+.++.|+...+ ++|++|... +......+..+|..+ +++.|+.+. +.++.++++++ .
T Consensus 17 ~gP~~~~~~i~s~~e~e~fi~~~~---v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~-----~~~v~~~~~v~-~ 86 (124)
T 2l4c_A 17 PGAAQEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNIT-G 86 (124)
T ss_dssp SCCSCCCEECCSHHHHHHHHHTSS---EEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEEC-----CHHHHHHTTCC-S
T ss_pred cCCCCcceEcCCHHHHHHHHhcCC---CEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEC-----hHHHHHHcCCC-C
Confidence 3666544 766666888986433 666655433 333356667788888 888998874 35699999997 7
Q ss_pred CEEEEEeCCCCceeeecC----CCChhHHHHHHHhccc
Q 010886 332 PAIVFLKDPGVKPVVYYG----SFNNSRLSEVMEQNKL 365 (498)
Q Consensus 332 Pti~lfk~~~~~~~~y~g----~~~~~~L~~fi~~~~~ 365 (498)
|+|++|+++++.++.|.| +.+.++|.+||..|++
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 999999998888899986 7899999999998753
No 212
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.52 E-value=4.6e-09 Score=88.86 Aligned_cols=89 Identities=12% Similarity=0.132 Sum_probs=56.6
Q ss_pred CcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch--hhhHHHHhCCCCcccceeeeeEEEEe
Q 010886 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--LATHLAERKPIGQIFFRRGLPSLVAF 223 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~--~~~~l~~~~~~~~~~~I~~~PTl~~f 223 (498)
+++.++. +.+++ ||++||++|+.+.|.+++++.. ..+..||.+.+. ....++++++ |.++||+ |
T Consensus 13 ~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~------v~~~Pt~--~ 78 (116)
T 2e7p_A 13 AKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTG------RGTVPNV--F 78 (116)
T ss_dssp HHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--E
T ss_pred HHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhC------CCCcCEE--E
Confidence 3344444 45555 9999999999999999887532 344444444220 0134888888 9999999 5
Q ss_pred CCCCcCCCCcccccCCC---CHHHHHHHHHHH
Q 010886 224 PPGCKSSDCMTRFEGEL---SVDAVTDWFATA 252 (498)
Q Consensus 224 ~~g~~~~~~~~~Y~G~r---~~~~Iv~fv~k~ 252 (498)
.+|.. ...|.|.. +.+.|.+|+.+.
T Consensus 79 ~~g~~----v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 79 IGGKQ----IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp ETTEE----EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECCEE----ECChHHHHHHHhCChHHHHHHHc
Confidence 57754 22344433 555677777654
No 213
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.47 E-value=5.9e-07 Score=79.97 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=70.3
Q ss_pred CCCcEEEEEecCCCCC-CCCChHHHHHHHHHhhc-----cceEEEEEcccch-------------------------hhh
Q 010886 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~-----~i~va~Vdc~~~~-------------------------~~~ 200 (498)
.+++++|.|+++||++ |+...|.++++.+++++ .+.+..|+++.++ ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999999974 5788888887421 112
Q ss_pred HHHHhCCCCcccceeeee---------------EEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~P---------------Tl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.+++.|+ |.+.| ++.++ ++|.. ...|.|..+.++|.+.+.+.
T Consensus 102 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVARAYR------VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF----LDYFGQNKRKGEIAASIATH 159 (164)
T ss_dssp HHHHTTT------CCEEEEEECTTSCEEEEECCEEEEECTTSCE----EEEEETTCCHHHHHHHHHHH
T ss_pred HHHHhcC------eEEEecCCCCCCCeeEeccceEEEECCCCeE----EEEeCCCCCHHHHHHHHHHH
Confidence 3666666 88999 55544 56654 34577889999999998876
No 214
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.46 E-value=2.7e-07 Score=83.40 Aligned_cols=96 Identities=8% Similarity=-0.073 Sum_probs=66.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHH-HhCCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~-~~~~~~------------ 209 (498)
.+++++|.|||+||+.|+ ..|.++++++++++. +.|..|+++. .......+ +++++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 999999999999876 7888898741 11112233 221110
Q ss_pred -----------cccceeeee------EEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 -----------~~~~I~~~P------Tl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+.|+|.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV----YERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 125588999 55555 66755 34567888889999888776
No 215
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.44 E-value=9.9e-07 Score=79.14 Aligned_cols=91 Identities=10% Similarity=0.010 Sum_probs=70.3
Q ss_pred CCCcEEEEEecCCCCC-CCCChHHHHHHHHHhh-----ccceEEEEEcccch-------------------------hhh
Q 010886 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLE-----GIANTGMVELGDIR-------------------------LAT 200 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~-----~~i~va~Vdc~~~~-------------------------~~~ 200 (498)
.+++++|.|+++||++ |+...|.+++++++++ ..+.+..|+++.++ ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3679999999999998 9999999999999996 35788889887321 112
Q ss_pred HHHHhCCCCcccceeeee---------------EEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~P---------------Tl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.+++.|+ |...| +++++ ++|.. ...|.|..+.++|.+.+.+.
T Consensus 105 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QASHSYR------VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF----TDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHHHHSC------CCCEECCCCSSCCCCEECCCEEEEECTTSCE----EEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHhC------eEEEecCCCCCCCeEEeccceEEEECCCCeE----EEEECCCCCHHHHHHHHHHH
Confidence 4667777 77888 65555 66655 34577999999999999876
No 216
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=2.3e-08 Score=89.13 Aligned_cols=95 Identities=9% Similarity=-0.046 Sum_probs=63.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHH-HHHHhh--ccceEEEEEcccchh-hhHHHHhCC------------CCcccc--
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKT-IAALLE--GIANTGMVELGDIRL-ATHLAERKP------------IGQIFF-- 213 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~-~A~~l~--~~i~va~Vdc~~~~~-~~~l~~~~~------------~~~~~~-- 213 (498)
.+++++|.||++||++|+...|.+++ +.+.++ ..+.+..|++++++. .....++++ +.+.|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46799999999999999999999998 888776 347888888885432 122232222 122333
Q ss_pred eeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 214 I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
+.++||++++ ++|... ..+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i~----~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIV----KLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4679999988 566542 23344 455556555544
No 217
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.43 E-value=5.3e-07 Score=83.14 Aligned_cols=98 Identities=9% Similarity=-0.048 Sum_probs=71.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHH-HhCCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~-~~~~~~------------ 209 (498)
.++++||.||++||+.|+...|.++++++++++. +.|..|++++ .....+.+ +++++.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4689999999999999999999999999999876 8899999872 11222334 332110
Q ss_pred -----------cccceeeee------E-EEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 210 -----------QIFFRRGLP------S-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 210 -----------~~~~I~~~P------T-l~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
+.|+|.++| + +++-++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE----EEEECCCCCHHHHHHHHHHHH
Confidence 013588999 5 444567765 345678889999999988763
No 218
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.43 E-value=7.8e-08 Score=79.77 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=60.7
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSD 231 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~ 231 (498)
...+.++.|++|||++|+.+.|.++++++ .+.+..||.++. ...+++++++ . ++|++ |.+|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~-~~~el~~~~g-~------~vP~l--~~~g~~--- 76 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLP-ENSTWYERYK-F------DIPVF--HLNGQF--- 76 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSS-TTHHHHHHSS-S------SCSEE--EESSSE---
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCc-chHHHHHHHC-C------CCCEE--EECCEE---
Confidence 45668899999999999999998877653 278999999822 2245888776 4 89987 456643
Q ss_pred CcccccCCCCHHHHHHHHHHH
Q 010886 232 CMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 232 ~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
...|..+.+.|.+++.+.
T Consensus 77 ---~~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 77 ---LMMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp ---EEESSCCHHHHHHHHHSS
T ss_pred ---EEecCCCHHHHHHHHHHH
Confidence 235668889999998765
No 219
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.42 E-value=4.7e-07 Score=85.64 Aligned_cols=89 Identities=10% Similarity=0.111 Sum_probs=68.6
Q ss_pred CC-cEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccch--------------------------hhhHHHH
Q 010886 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------------LATHLAE 204 (498)
Q Consensus 153 ~~-~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~--------------------------~~~~l~~ 204 (498)
++ +++|.||++||++|+...|.++++++++++. +.|..|+++... ....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 44 5999999999999999999999999999876 789999985210 1234777
Q ss_pred hCCCCcccceeeeeEEEEe-CCCCcCCCCcccccC-----------CCCHHHHHHHHHHHh
Q 010886 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEG-----------ELSVDAVTDWFATAI 253 (498)
Q Consensus 205 ~~~~~~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G-----------~r~~~~Iv~fv~k~~ 253 (498)
.|+ |.++|+++++ ++|.. .|.| ..+.+.|.+.+.+.+
T Consensus 138 ~~~------v~~~P~~~liD~~G~i------~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 138 AYG------AACTPDFFLYDRERRL------VYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp HHT------CCEESEEEEECTTCBE------EEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred HcC------CCCCCeEEEECCCCcE------EEeccccccccccccccCHHHHHHHHHHHH
Confidence 777 9999999999 55543 4554 345678888887763
No 220
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.42 E-value=1.6e-07 Score=82.16 Aligned_cols=85 Identities=6% Similarity=-0.058 Sum_probs=62.8
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh-----------------------hhHHHHhCC
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-----------------------ATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~-----------------------~~~l~~~~~ 207 (498)
.+++++|.||++||++|+...|.+.++.+++++. +.|..|+++.++. ...+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4689999999999999999999999999998754 7888888885431 124556666
Q ss_pred CCcccceeeeeEEEEeC-CCCcCCCCcccccCCCCHHHHHHHH
Q 010886 208 IGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWF 249 (498)
Q Consensus 208 ~~~~~~I~~~PTl~~f~-~g~~~~~~~~~Y~G~r~~~~Iv~fv 249 (498)
|.++|+.+++. +|.. .+.+ .+.+++.+++
T Consensus 111 ------v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l 140 (143)
T 4fo5_A 111 ------LRKGFKNFLINDEGVI------IAAN-VTPEKLTEIL 140 (143)
T ss_dssp ------GGGCCCEEEECTTSBE------EEES-CCHHHHHHHH
T ss_pred ------CCCCCcEEEECCCCEE------EEcc-CCHHHHHHHH
Confidence 99999988886 4543 3332 2455665554
No 221
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.39 E-value=2.9e-07 Score=73.01 Aligned_cols=79 Identities=10% Similarity=0.157 Sum_probs=59.1
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchh-hhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~-~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~ 235 (498)
++.|++|||++|+++.|.+++++.+..+ +.+..+|.++++. ..+++++++.+ +.++|++ |.+|..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~----~~~vP~i--~~~g~~------- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKP----VETVPQI--FVDQQH------- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCC----SCCSCEE--EETTEE-------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCC----CceeCeE--EECCEE-------
Confidence 6789999999999999999999887654 7899999885431 13588877644 7899998 446642
Q ss_pred ccCCCCHHHHHHHHHHH
Q 010886 236 FEGELSVDAVTDWFATA 252 (498)
Q Consensus 236 Y~G~r~~~~Iv~fv~k~ 252 (498)
-|+ .++|.+++.+.
T Consensus 69 -i~~--~~~l~~~~~~~ 82 (85)
T 1ego_A 69 -IGG--YTDFAAWVKEN 82 (85)
T ss_dssp -EES--SHHHHHHHHHH
T ss_pred -EEC--HHHHHHHHHHh
Confidence 232 36888888764
No 222
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.38 E-value=2.2e-07 Score=70.55 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=46.4
Q ss_pred ccccccCCCCC---CCHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhHcCC
Q 010886 38 SHYDALGIKPY---SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTD 89 (498)
Q Consensus 38 d~y~ilgv~~~---a~~~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~L~d 89 (498)
.-|.||||+++ ++.++|+++||+|-...|||++ ++.-....|+.|.+.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 46889999999 9999999999999999999995 788889999999998863
No 223
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.37 E-value=1.2e-06 Score=80.60 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=69.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc-------c-hhhhHHHH-hCCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD-------I-RLATHLAE-RKPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~-------~-~~~~~l~~-~~~~~------------ 209 (498)
.++++||.||++||++|+...|.++++++++++. +.|..|+++. . ....+.++ ++++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4689999999999999999999999999999876 7888998862 1 11111222 22210
Q ss_pred --------------cccceeeee---EEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 --------------QIFFRRGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 --------------~~~~I~~~P---Tl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i----~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 122345677 76666 66654 34677889999999999877
No 224
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.36 E-value=5.6e-07 Score=80.63 Aligned_cols=97 Identities=8% Similarity=-0.050 Sum_probs=70.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHH-hCCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~~-~~~~~------------ 209 (498)
.+++++|.||++||++|+...|.++++++++++. +.|..|+++. .....+.++ ++++.
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4689999999999999999999999999999876 8899999852 122233444 44321
Q ss_pred ---cc--------cce--eeee---EEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 ---QI--------FFR--RGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 ---~~--------~~I--~~~P---Tl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+. ++| .++| +.+++ ++|.. ...|.|..+.++|.+++.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV----VDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCE----EEeeCCCCCHHHHHHHHHHH
Confidence 01 135 6789 65555 66754 34577888889999988776
No 225
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.31 E-value=8.8e-07 Score=81.02 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=70.3
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHHh-CCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~~~-~~~~------------ 209 (498)
.+++++|.||++||++|+...|.++++++++++. +.|..|+++. .....+.+++ +++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4689999999999999999999999999999876 7899999863 1122334444 2210
Q ss_pred --c---ccceeeee--------EEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 --Q---IFFRRGLP--------SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 --~---~~~I~~~P--------Tl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
. .|.+.++| ++++-++|.. ...|.|..+.++|.+.+.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV----VGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE----EEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 1 23477889 5555567765 34577888889988887654
No 226
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.28 E-value=6e-07 Score=84.92 Aligned_cols=84 Identities=11% Similarity=0.068 Sum_probs=61.2
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEE---------------------------------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vd--------------------------------------- 192 (498)
+.++.++.|+++||++|+++.|.++++++. .+.+.-+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999988753 23332221
Q ss_pred -cccc-hhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 193 -LGDI-RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 193 -c~~~-~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|... .....+++++| |+|.||+ ++.+|. .+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gtPt~-v~~dG~-------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLG------VSGTPAV-VLSNGT-------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHT------CCSSSEE-ECTTSC-------EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCccCEE-EEcCCe-------EecCCCCHHHHHHHHHHh
Confidence 2210 12234777777 9999999 566663 567999999999998765
No 227
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.26 E-value=2.1e-06 Score=78.68 Aligned_cols=91 Identities=12% Similarity=0.052 Sum_probs=69.6
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh----------------------hhHHHHhCC
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~----------------------~~~l~~~~~ 207 (498)
.+++++|.|| ++||++|+...|.++++++++++. +.+..|+++.... ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3579999999 999999999999999999999864 7888898874211 133556666
Q ss_pred CCccccee------eeeEEEEe-CCCCcCCCCcccccCC----CCHHHHHHHHHHH
Q 010886 208 IGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (498)
Q Consensus 208 ~~~~~~I~------~~PTl~~f-~~g~~~~~~~~~Y~G~----r~~~~Iv~fv~k~ 252 (498)
|. ++|+++++ ++|.. ...+.|. ++.++|.+.+.+.
T Consensus 110 ------v~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 ------VLNEETGLADRGTFIIDPDGVI----QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp ------CEETTTTEECEEEEEECTTSBE----EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred ------CCcCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 99999999 56654 2344454 4788999988775
No 228
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.22 E-value=8.7e-07 Score=76.54 Aligned_cols=95 Identities=6% Similarity=0.008 Sum_probs=78.5
Q ss_pred EEEec-CCCCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceee
Q 010886 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (498)
Q Consensus 138 V~~Lt-~~nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~ 216 (498)
+..|+ .++++++++++++++|-|+++||+.| .+.|.++|+.+ +.+.||.++-. +++++++ +.
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~~------~v~~~~~------v~- 85 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTDS------EVLTHYN------IT- 85 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECCH------HHHHHTT------CC-
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEChH------HHHHHcC------CC-
Confidence 34564 46688888889999999999999988 88999999999 77899988643 3888888 87
Q ss_pred eeEEEEeCCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 217 LPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 217 ~PTl~~f~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|++++|+++... ...|.| ..+.++|.+|+...
T Consensus 86 ~~~vvlfkkfde~---~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 86 GNTICLFRLVDNE---QLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SSCEEEEETTTTE---EEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCC---ceeecCcccCCCCHHHHHHHHHHh
Confidence 7999999987532 457886 78999999999865
No 229
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.22 E-value=1.8e-06 Score=77.21 Aligned_cols=97 Identities=8% Similarity=-0.047 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHH-HHhCCCC------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHL-AERKPIG------------ 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l-~~~~~~~------------ 209 (498)
.+++++|.||++||++|+...|.++++++++++. +.+..|+++. ....... .+++++.
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4689999999999999999999999999999875 7899999863 1122223 2333211
Q ss_pred ---ccc--------c-----eeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 210 ---QIF--------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 210 ---~~~--------~-----I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
..| + |+++|+.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP----VKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCE----EEEcCCCCCHHHHHHHHHHH
Confidence 011 2 3445766666 55654 34577888888888888765
No 230
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.22 E-value=2.4e-06 Score=79.20 Aligned_cols=91 Identities=9% Similarity=0.034 Sum_probs=69.1
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh-------------------------hhHHHH
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~-------------------------~~~l~~ 204 (498)
.+++++|.|| ++||++|+...|.+.++++++++. +.|..|+++.... ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4578999999 999999999999999999999765 7888898874211 124556
Q ss_pred hCCCCccccee-----eeeEEEEe-CCCCcCCCCcccccCCC----CHHHHHHHHHHH
Q 010886 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFATA 252 (498)
Q Consensus 205 ~~~~~~~~~I~-----~~PTl~~f-~~g~~~~~~~~~Y~G~r----~~~~Iv~fv~k~ 252 (498)
.|+ |. ++|+++++ ++|.. ...+.|.. +.++|.+.+.+.
T Consensus 112 ~~~------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYD------VLFEEAIALRGAFLIDKNMKV----RHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTT------CEETTTEECEEEEEEETTTEE----EEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhC------CcccCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 666 98 99999888 55654 23444543 688899888765
No 231
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.19 E-value=1.8e-06 Score=77.23 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=63.7
Q ss_pred CCc-EEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh------------------hhHHHHhCCCCcc
Q 010886 153 SKP-WLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------ATHLAERKPIGQI 211 (498)
Q Consensus 153 ~~~-~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~------------------~~~l~~~~~~~~~ 211 (498)
++. ++|.|| ++||++|....|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 103 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG---- 103 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT----
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC----
Confidence 455 999999 999999999999999999999876 7888888873221 123666666
Q ss_pred cceee----eeEEEEeC-CCCcCCCCcccccCCC----CHHHHHHHHHH
Q 010886 212 FFRRG----LPSLVAFP-PGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (498)
Q Consensus 212 ~~I~~----~PTl~~f~-~g~~~~~~~~~Y~G~r----~~~~Iv~fv~k 251 (498)
|.+ +|+.+++. +|.. ...|.|.. ..+++++.+.+
T Consensus 104 --v~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 104 --AKGFILPARITFVIDKKGII----RHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp --CCCSSSCCCEEEEECTTSBE----EEEEECSSCTTHHHHHHHHHHHH
T ss_pred --CCCcCcccceEEEECCCCEE----EEEEecCCCCCcCHHHHHHHHHH
Confidence 889 99988885 5644 23556633 34445554443
No 232
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.17 E-value=1.6e-06 Score=78.50 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=64.0
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEccc-----------------------------------
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD----------------------------------- 195 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~----------------------------------- 195 (498)
.+.++.+++|+++||+||+++.|..+++.++..+ +++.-++..-
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 3567899999999999999999999999887654 5555544210
Q ss_pred -------------------------------chhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHH
Q 010886 196 -------------------------------IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDA 244 (498)
Q Consensus 196 -------------------------------~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~ 244 (498)
-.....+++++| |.|+||+++ +|. .+.|..+.+.
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~g------v~gtPt~~i--~g~-------~~~G~~~~~~ 163 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLG------FNGTPSFVV--EDA-------LVPGFVEQSQ 163 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHT------CCSSSEEEE--TTE-------EECSCCCHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcC------CccCCEEEE--CCE-------EeeCCCCHHH
Confidence 011223556666 999999987 552 6789999999
Q ss_pred HHHHHHHH
Q 010886 245 VTDWFATA 252 (498)
Q Consensus 245 Iv~fv~k~ 252 (498)
|.+.+.+.
T Consensus 164 l~~~i~~~ 171 (175)
T 3gyk_A 164 LQDAVDRA 171 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 233
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.15 E-value=2.4e-06 Score=75.87 Aligned_cols=88 Identities=11% Similarity=0.002 Sum_probs=62.8
Q ss_pred CcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh--------------------hhHHHHhCCCCcc
Q 010886 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQI 211 (498)
Q Consensus 154 ~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~--------------------~~~l~~~~~~~~~ 211 (498)
++++|.|| ++||++|+...|.+.++++++++. +.+..|+++.... ...+++.|+
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---- 112 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG---- 112 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT----
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC----
Confidence 48999998 999999999999999999998754 7888888874211 244677777
Q ss_pred ccee----eee--EEEE-eCCCCcCCCCcccccCCC----CHHHHHHHHHH
Q 010886 212 FFRR----GLP--SLVA-FPPGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (498)
Q Consensus 212 ~~I~----~~P--Tl~~-f~~g~~~~~~~~~Y~G~r----~~~~Iv~fv~k 251 (498)
|. ++| +.++ -++|... ..+.|.. ..+++++.+.+
T Consensus 113 --v~~~~~~~p~~~~~lid~~G~i~----~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 113 --VFNEQAGIANRGTFVVDRSGIIR----FAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp --CEETTTTEECSEEEEECTTSBEE----EEEECCTTCCCCHHHHHHHHHH
T ss_pred --CccccCCCeeeeEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHH
Confidence 88 999 5544 4666542 3444544 45666665543
No 234
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.14 E-value=3.9e-06 Score=77.58 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=69.0
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhh----------------------hHHHHhCC
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA----------------------THLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~----------------------~~l~~~~~ 207 (498)
.+++++|.|| ++||++|+...|.+.++++++++. +.|..|+++..... ..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3578999999 999999999999999999999874 78889988742221 23444444
Q ss_pred CCccccee-----eeeEEEEeC-CCCcCCCCcccccCC----CCHHHHHHHHHHH
Q 010886 208 IGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (498)
Q Consensus 208 ~~~~~~I~-----~~PTl~~f~-~g~~~~~~~~~Y~G~----r~~~~Iv~fv~k~ 252 (498)
|. ++|+++++. +|.. ...+.|. ++.++|.+.+.+.
T Consensus 124 ------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 ------VLNADGVADRVTFIVDPNNEI----QFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp ------CBCTTSSBCEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred ------CcccCCCccceEEEEcCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 98 999999995 5544 2344454 3789999998876
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.12 E-value=1.6e-06 Score=81.70 Aligned_cols=83 Identities=18% Similarity=0.190 Sum_probs=59.7
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEE---------------------------------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vd--------------------------------------- 192 (498)
+.++.++.|+++||+||+++.|..+++++. + +++.-+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 577899999999999999999999987652 2 3332221
Q ss_pred -cccc-hhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 193 -LGDI-RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 193 -c~~~-~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
|... .....+++++| |+|.||+++ .+|. .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gTPt~vi-~nG~-------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFG------VRGTPSIVT-STGE-------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHT------CCSSCEEEC-TTSC-------CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCcCCEEEE-eCCE-------EecCCCCHHHHHHHHHh
Confidence 1100 01234677777 999999987 6764 46798999999998865
No 236
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.08 E-value=3e-06 Score=77.40 Aligned_cols=96 Identities=5% Similarity=-0.089 Sum_probs=66.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHHhCCCC-------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIG------------- 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~~~~~~~------------- 209 (498)
.+++++|.||++||+.|+...|.++++++++++. +.|..|+++. .....+.++++++.
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4689999999999999999999999999999875 7899998862 11223344554321
Q ss_pred --ccc----------c-----eeeeeEEEEe-CCCCcCCCCcccccCCCCHHHHHHHHHH
Q 010886 210 --QIF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 210 --~~~----------~-----I~~~PTl~~f-~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k 251 (498)
+.| . |+.+|+++++ ++|.. ...|.|..+.++|.+++.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE----EEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHH
Confidence 012 1 3445887777 55654 2356788888877766543
No 237
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.08 E-value=5.9e-06 Score=76.48 Aligned_cols=91 Identities=14% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh-------------------------hhHHHH
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~-------------------------~~~l~~ 204 (498)
.+++++|.|| ++||++|....|.+.++++++++. +.|..|+++.... ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578999999 999999999999999999999764 7899999874321 123555
Q ss_pred hCCCCccccee------eeeEEEEe-CCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 205 RKPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 205 ~~~~~~~~~I~------~~PTl~~f-~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+ |. ++|+.+++ ++|... ..+.| .++.+++++.+.+.
T Consensus 113 ~~g------v~~~~~~~~~P~~~lid~~G~i~----~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYG------VLKTDEGIAYRGLFIIDGKGVLR----QITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CccCCCCceeeEEEEECCCCcEE----EEEeCCCCCCCCHHHHHHHHHhc
Confidence 555 88 89988887 455432 23334 46789999988765
No 238
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.06 E-value=7.5e-06 Score=74.57 Aligned_cols=97 Identities=11% Similarity=0.057 Sum_probs=67.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHHh-CCCCc-----------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIGQ----------- 210 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~--------~~~~~~l~~~-~~~~~----------- 210 (498)
.++++||.|+++||+.|+...|.++++++++++. +.|..|+++. .....+.+++ +++.-
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4679999999999999999999999999999876 7888898753 1223345555 44220
Q ss_pred ----ccc-----eeeeeE-----EEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 211 ----IFF-----RRGLPS-----LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 211 ----~~~-----I~~~PT-----l~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.|. +.+.|+ +++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV----VKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE----EEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 000 113564 666667765 34677888888777777665
No 239
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.05 E-value=6.9e-06 Score=77.13 Aligned_cols=43 Identities=9% Similarity=-0.188 Sum_probs=39.2
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~ 194 (498)
.++++||.|||+||+.|+...|.++++++++++. +.|..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4679999999999999999999999999999876 788899986
No 240
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.05 E-value=1.2e-06 Score=68.94 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=49.0
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y 236 (498)
++.|++|||++|+++.+.+++. .+.+..+|+++++...+...+++ +.++||+ |.+|. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g------~~~vP~~--~~~g~--------~ 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQG------FRQLPVV--IAGDL--------S 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CCSSCEE--EETTE--------E
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhC------CCccCEE--EECCE--------E
Confidence 5789999999999988887753 25778899986654333333577 8999998 34553 2
Q ss_pred cCCCCHHHHHHHH
Q 010886 237 EGELSVDAVTDWF 249 (498)
Q Consensus 237 ~G~r~~~~Iv~fv 249 (498)
-|+.+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (81)
T 1h75_A 61 WSGFRPDMINRLH 73 (81)
T ss_dssp EESCCHHHHGGGS
T ss_pred EecCCHHHHHHHH
Confidence 2445566666554
No 241
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.01 E-value=6.9e-07 Score=83.45 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=41.0
Q ss_pred CCCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcccc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI 196 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~~ 196 (498)
+.++++|+||++||+||+++.|.| +++++.+.+.++|.+++.+.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 467899999999999999999999 999999988899999999854
No 242
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.00 E-value=5.6e-06 Score=75.83 Aligned_cols=43 Identities=2% Similarity=-0.212 Sum_probs=39.2
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~ 194 (498)
.+++++|.|+++||+.|+...|.++++++++++. +.|..|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 4689999999999999999999999999999875 789999986
No 243
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.99 E-value=2.9e-05 Score=69.60 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=68.1
Q ss_pred CCCcEEEEEecCCCC-CCCCChHHHHHHHHHhhcc---ceEEEEEcccc----hhhhHHHHhCCCC--------------
Q 010886 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELGDI----RLATHLAERKPIG-------------- 209 (498)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~~---i~va~Vdc~~~----~~~~~l~~~~~~~-------------- 209 (498)
.+++++|.|+++||+ +|....|.+.++.+.++.. +.|..|+++.. ......++++++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 468899999999999 9999999999999998754 78999998721 1222334444321
Q ss_pred -----------------cccceeeeeEEEEe-CCCCcCCCCcccccCCC--CHHHHHHHHHHH
Q 010886 210 -----------------QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (498)
Q Consensus 210 -----------------~~~~I~~~PTl~~f-~~g~~~~~~~~~Y~G~r--~~~~Iv~fv~k~ 252 (498)
..|.+.+.|+++++ ++|.. ...|.|.. +.++|.+.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV----LKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE----EEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE----EEEEcCCCCCCHHHHHHHHHHH
Confidence 01346778986666 45544 23566765 578899888776
No 244
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.98 E-value=6.3e-06 Score=63.37 Aligned_cols=71 Identities=8% Similarity=-0.038 Sum_probs=50.2
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y 236 (498)
++.|+++||++|+++.+.+++. .+.+..+|.++++...+..++++ +.++|++.. +|. .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~------~~~vP~l~~--~g~--------~ 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALG------YVQAPVVEV--DGE--------H 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CBCCCEEEE--TTE--------E
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcC------CCccCEEEE--CCe--------E
Confidence 5789999999999988887754 26678889986643222223677 889999974 552 2
Q ss_pred cCCCCHHHHHHHH
Q 010886 237 EGELSVDAVTDWF 249 (498)
Q Consensus 237 ~G~r~~~~Iv~fv 249 (498)
-|+.+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (75)
T 1r7h_A 61 WSGFRPERIKQLQ 73 (75)
T ss_dssp EESCCHHHHHHHH
T ss_pred EcCCCHHHHHHHH
Confidence 3446677887775
No 245
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.96 E-value=3.2e-05 Score=74.39 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=73.1
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe--cCCCCCcHHHHHHHHhcc--ccceEEEEEecc--cc-cHHHHHHcCCC--CCC
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS--KTGERASPFVRQISRNYW--AYASFAFVLWRE--EE-SSIWWNTFEVE--SAP 332 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~--~~~~~~~~~~~~~A~~~~--~~~~f~~v~~~~--~~-~~~l~~~f~V~--~~P 332 (498)
+++.+ ++..+... ..++|.|+. +-|. ..|.+..+|..+. ..+.|+.|+..+ |+ ..+++++|+|. ++|
T Consensus 10 Lt~~n-F~~~i~~~--~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~P 85 (240)
T 2qc7_A 10 LDTVT-FYKVIPKS--KFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYP 85 (240)
T ss_dssp CCTTH-HHHHGGGC--SEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCS
T ss_pred CCHHH-HHHHHcCC--CCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCC
Confidence 55544 55566432 235666666 5454 6777888888775 357788876544 43 47899999999 999
Q ss_pred EEEEEeCCC-CceeeecCCCChhHHHHHHHhcc
Q 010886 333 AIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 333 ti~lfk~~~-~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
|+++|+++. ..+..|.|.++.+.|.+||+.+.
T Consensus 86 Tl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 86 VFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp EEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred EEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999876 46788999999999999999873
No 246
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.95 E-value=8e-06 Score=75.19 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=67.2
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhh-------------------------hHHHH
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~-------------------------~~l~~ 204 (498)
.+++++|.|| ++||++|....|.+.++++++++. +.|..|+++..... ..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4678999999 999999999999999999999754 78888888742211 23555
Q ss_pred hCCCCccccee-----eeeEEEEe-CCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 205 ~~~~~~~~~I~-----~~PTl~~f-~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+ |. .+|+++++ ++|... ..+.| .++.+++++.+.+.
T Consensus 110 ~~g------v~~~~g~~~P~~~liD~~G~i~----~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYD------VLFNESVALRAFVLIDKQGVVQ----HLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTT------CEETTTEECCEEEEECTTSBEE----EEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhC------CcCcCCceeeEEEEEcCCCEEE----EEEeCCCCCCCCHHHHHHHHHHH
Confidence 555 98 89999999 556442 23334 35678888887664
No 247
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.91 E-value=2.5e-05 Score=73.86 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=67.8
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccchh-------------------------hhHHHHh
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRL-------------------------ATHLAER 205 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~~-------------------------~~~l~~~ 205 (498)
+++++|.|| ++||+.|+...|.+.++++++++ .+.|..|+++.... ...+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 589999999 99999999999999999999975 47888898874211 1235555
Q ss_pred CCCCccccee------eeeEEEEe-CCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 206 KPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 206 ~~~~~~~~I~------~~PTl~~f-~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
|+ |. ++|+++++ ++|... ..+.| .++.++|++.+.+.
T Consensus 136 yg------v~~~~~g~~~P~~~liD~~G~I~----~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 136 YG------VLLEGPGLALRGLFIIDPNGVIK----HLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp TT------CEETTTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHH
T ss_pred hC------CeecCCCcccceEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHh
Confidence 55 88 99999999 555442 22233 36788999888765
No 248
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.90 E-value=9.6e-06 Score=75.42 Aligned_cols=96 Identities=9% Similarity=-0.001 Sum_probs=67.3
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------C------------CCcc
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQI 211 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~------------~~~~ 211 (498)
+++++|.|| ++||++|....|.+.++++++++. +.|..|+++........++++ + +.+.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578999999 999999999999999999999764 788899987432222222222 0 1123
Q ss_pred ccee------eeeEEEEeC-CCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 212 FFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~------~~PTl~~f~-~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
|+|. ++|+++++. +|... ..+.| .++.++|++.+.+.
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~----~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLR----QITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEE----EEEeCCCCCCCCHHHHHHHHHHh
Confidence 4498 999988884 55432 22223 46778999888765
No 249
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.86 E-value=3.7e-05 Score=63.99 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=64.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEE-EecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIF-FSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~-f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.+... .++++++. +++-| ....|.+..++..+. ...|+.++.. +.++++++|+|.+.||+++|
T Consensus 5 i~~~~~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 5 VKDQEDFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVD--ECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CCSHHHHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred eCCHHHHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecc--cCHHHHHHcCCCeecEEEEE
Confidence 44545566666543 34566654 44422 223566677777664 4566666532 24789999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
+++. ....+.| .+.+.|.+||++|+
T Consensus 81 ~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 81 KNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp ETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred ECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 8643 3345577 48899999999874
No 250
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.85 E-value=2.2e-06 Score=70.88 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=47.0
Q ss_pred cccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch----hhhHHHHhCCCCcccceeeeeEEEE
Q 010886 147 PSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVA 222 (498)
Q Consensus 147 ~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~----~~~~l~~~~~~~~~~~I~~~PTl~~ 222 (498)
++.++++. ++.|++|||++|+++.|.+++.+.... .+..+|++++. ....|++.++ +.++|++
T Consensus 6 ~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~i-- 72 (105)
T 1kte_A 6 NSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTG------ARTVPRV-- 72 (105)
T ss_dssp HHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHS------CCCSCEE--
T ss_pred HhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhC------CCCcCeE--
Confidence 34555443 677999999999999998887643322 17778888652 1234777788 8899997
Q ss_pred eCCCC
Q 010886 223 FPPGC 227 (498)
Q Consensus 223 f~~g~ 227 (498)
|.+|.
T Consensus 73 ~~~g~ 77 (105)
T 1kte_A 73 FIGKE 77 (105)
T ss_dssp EETTE
T ss_pred EECCE
Confidence 44663
No 251
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.84 E-value=4.9e-05 Score=70.54 Aligned_cols=95 Identities=8% Similarity=-0.046 Sum_probs=65.5
Q ss_pred CCCcEEEEEecCCCCC-CCCChHHHHHHHHHhhc----cceEEEEEcccc---h----------------------hhhH
Q 010886 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDI---R----------------------LATH 201 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~----~i~va~Vdc~~~---~----------------------~~~~ 201 (498)
.+++++|.|+++||++ |....|.+.++.+.+.. .+.|..|+++.. + ....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4689999999999998 99999999998888763 478888888731 0 1234
Q ss_pred HHHhCCCCccccee-eee---------------E-EEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHhhcC
Q 010886 202 LAERKPIGQIFFRR-GLP---------------S-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL 256 (498)
Q Consensus 202 l~~~~~~~~~~~I~-~~P---------------T-l~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~~~~ 256 (498)
+++.|+ |. +.| + +++-++|.. ...|.|..+.+.+.+.+.+.+..+
T Consensus 120 ~~~~~g------v~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i----~~~~~g~~~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 120 ACKKYR------VYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF----VDALGRNYDEKTGVDKIVEHVKSY 181 (200)
T ss_dssp HHHHTT------C--------------CTTTCCCEEEECTTSCE----EEEECTTCCTTHHHHHHHHHHHHC
T ss_pred HHHHcC------cEEeeccccCCCCCceeeecceEEEECCCCcE----EEEeCCCCCHHHHHHHHHHHHHHh
Confidence 666666 55 343 4 444566654 235678788888888887764433
No 252
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.84 E-value=1.4e-05 Score=73.66 Aligned_cols=44 Identities=9% Similarity=0.017 Sum_probs=39.0
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~ 194 (498)
.+.++.+|+|+++||++|+++.|.++++++.+.+.+.+..++..
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 45788999999999999999999999999988777778888875
No 253
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.83 E-value=6.8e-05 Score=68.65 Aligned_cols=113 Identities=9% Similarity=0.075 Sum_probs=73.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEec---------C--CCCCcHHHHHHHHhcc-----ccceEEEEEecccccHHHHHH
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSK---------T--GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNT 325 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~---------~--~~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~~~~l~~~ 325 (498)
+++.+ +++++.+. .+.++|+.|.. | |....|.+..+|.++. +.+.|+.|+..+ .++++++
T Consensus 23 lt~~n-F~~~v~~~-~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~--~~~la~~ 98 (178)
T 3ga4_A 23 VTADN-YPLLSRGV-PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE--VPQLVKD 98 (178)
T ss_dssp CCTTT-HHHHTTCC-TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--CHHHHHH
T ss_pred CCHHH-HHHHHccc-CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc--CHHHHHH
Confidence 56655 56666432 23455555543 1 1223577888888887 678888886432 5789999
Q ss_pred cCCCCCCEEEEEeCCCCce-----------eee---cC-CCChhHHHHHHHhcccCCCCcccccchhh
Q 010886 326 FEVESAPAIVFLKDPGVKP-----------VVY---YG-SFNNSRLSEVMEQNKLQELPQLRSVTSME 378 (498)
Q Consensus 326 f~V~~~Pti~lfk~~~~~~-----------~~y---~g-~~~~~~L~~fi~~~~~~~vp~lt~~~~~~ 378 (498)
|||.+.|||++|++++... ..| .| .++.+.|.+||.+..-..++-....++.+
T Consensus 99 ~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 99 LKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp TTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC---
T ss_pred cCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHH
Confidence 9999999999999876433 445 34 67889999999875444444334444433
No 254
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.79 E-value=9.1e-05 Score=64.78 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=68.1
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecCCCC-----CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGER-----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~~~-----~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~ 335 (498)
+++.+ +++++.. ...++++ |+.+-+.+ ..|.+..++.+|.+.++|+.|+.. +.++++.+|||.+.||++
T Consensus 20 vt~~~-F~~~v~~--~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD--e~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 20 VDEAT-VDDFIAH--SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE--AERGLMARFGVAVCPSLA 94 (137)
T ss_dssp ECTTT-HHHHHHT--SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG--GHHHHHHHHTCCSSSEEE
T ss_pred cCHhH-HHHHHhc--CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCccCCEEE
Confidence 45544 5565542 2224444 44443333 468888899999888888888742 247899999999999999
Q ss_pred EEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 336 lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+||++.. .....|..+.+.|.++|+++
T Consensus 95 lFkdG~~-v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 95 VVQPERT-LGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp EEECCEE-EEEEESCCCHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeCCCCHHHHHHHHHHH
Confidence 9997543 34457888999999999865
No 255
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.76 E-value=0.00024 Score=67.78 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=42.8
Q ss_pred CCCcEEEEEe-cCCCCCCC-CChHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHHhCC
Q 010886 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~-i-~va~Vdc~~~~~~~~l~~~~~ 207 (498)
.+++++|.|| +.||++|. .-.|.+.++++++++. + .|..|+.+........+++++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 91 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEK 91 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcC
Confidence 3578899999 99999999 9999999999998754 6 788888774333334444443
No 256
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.76 E-value=2.1e-05 Score=74.40 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=66.4
Q ss_pred CCCcEEEEEec-CCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------C------------CCc
Q 010886 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~------------~~~ 210 (498)
.++++||.||+ .||++|....|.+.++++++++. +.|..|+++........++++ + +.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46789999996 99999999999999999999865 788889987432222222221 0 112
Q ss_pred cccee------eeeEEEEeC-CCCcCCCCcccccCC----CCHHHHHHHHHHH
Q 010886 211 IFFRR------GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~------~~PTl~~f~-~g~~~~~~~~~Y~G~----r~~~~Iv~fv~k~ 252 (498)
.|+|. .+|+.+++- +|.. ...+.|. +..+++++.+...
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I----~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGIL----RQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 34488 899998885 4543 1233343 4577888777653
No 257
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.76 E-value=8.2e-05 Score=66.41 Aligned_cols=90 Identities=13% Similarity=-0.023 Sum_probs=62.9
Q ss_pred CCCcEEEEEecCC-CCCCCCChHHHHHHHHHhhccceEEEEEcccchh--------------------hhHHHHhCCCCc
Q 010886 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (498)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~--------------------~~~l~~~~~~~~ 210 (498)
.+++++|.||+.| |++|+...|.++++++++ ..+.+..|+.+.... ...+++.|+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--- 118 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFG--- 118 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTT---
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhC---
Confidence 3679999999999 999999999999999999 667888888874221 123455555
Q ss_pred ccceee------eeEEEEeC-CCCcCCCCcccccC-----CCCHHHHHHHHHHH
Q 010886 211 IFFRRG------LPSLVAFP-PGCKSSDCMTRFEG-----ELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~~------~PTl~~f~-~g~~~~~~~~~Y~G-----~r~~~~Iv~fv~k~ 252 (498)
|.. .|+.+++- +|.. ...+.| ..+.+++++.+++.
T Consensus 119 ---v~~~~~g~~~p~~~lid~~G~i----~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 119 ---VYIKELRLLARSVFVLDENGKV----VYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp ---CBBTTTCSBCCEEEEECTTSCE----EEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ---CccccCCceeeEEEEEcCCCcE----EEEEecCCcCCCCCHHHHHHHHHHh
Confidence 665 48877775 4543 223333 22457788877654
No 258
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.74 E-value=0.00015 Score=70.01 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=71.1
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE--ecCCCCCcHHHHHHHHhcc---ccceEEEEEecc---cccHHHHHHcCCC--CC
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFF--SKTGERASPFVRQISRNYW---AYASFAFVLWRE---EESSIWWNTFEVE--SA 331 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f--~~~~~~~~~~~~~~A~~~~---~~~~f~~v~~~~---~~~~~l~~~f~V~--~~ 331 (498)
+++.+ +++.+... ..++|.|+ .+-|. ..|.+..+|..+. +.+.|+.|+..+ ...++++++|+|. ++
T Consensus 21 Lt~~n-F~~vi~~~--~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~ 96 (248)
T 2c0g_A 21 LDELS-FEKTVERF--PYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNF 96 (248)
T ss_dssp CCTTT-HHHHHTTS--SEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSC
T ss_pred CCHHH-HHHHHhcC--CCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCC
Confidence 55554 55565422 23566677 56554 6788888888774 367788876443 1147899999999 99
Q ss_pred CEEEEEeCCC-Cceeee--cCCCChhHHHHHHHhcc
Q 010886 332 PAIVFLKDPG-VKPVVY--YGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 332 Pti~lfk~~~-~~~~~y--~g~~~~~~L~~fi~~~~ 364 (498)
||+++|+ +. ..+..| .|.++.+.|.+||+++.
T Consensus 97 PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 97 PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 9999999 65 357888 89999999999999863
No 259
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.73 E-value=8.5e-05 Score=68.24 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=34.8
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc 193 (498)
+.++.+++|+.+||++|.++.|.+.++.+.+.+.+.+-.+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 467889999999999999999999999988866555555543
No 260
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.73 E-value=0.00011 Score=62.44 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=63.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhcc-----ccceEEEEEecccccHHHHHHcCCCCCCE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNTFEVESAPA 333 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~~~~l~~~f~V~~~Pt 333 (498)
++..+ +++.+... ...++|.|+++-| ....|.+..+|..+. +.+.|+.++.. +..+++++|+|.++||
T Consensus 20 l~~~~-f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt 95 (127)
T 3h79_A 20 LTDET-FDSIVMDP-EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--KYPDVIERMRVSGFPT 95 (127)
T ss_dssp CCTTT-HHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--TCHHHHHHTTCCSSSE
T ss_pred CChhh-HHHHHhCC-CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--ccHhHHHhcCCccCCE
Confidence 55444 45555321 1234555555422 223466666665442 34556666422 2478999999999999
Q ss_pred EEEEeCCCCc-eeeecCCCChhHHHHHHHhc
Q 010886 334 IVFLKDPGVK-PVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 334 i~lfk~~~~~-~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++|++++.. +..|.|..+.+.|.+||+++
T Consensus 96 ~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 96 MRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred EEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999986653 47899999999999999875
No 261
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.69 E-value=2.5e-05 Score=71.89 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=35.8
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc 193 (498)
+.++.+|+|+++||+||+++.|.++++++.+.+.+.+-.+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 578899999999999999999999999998877666655554
No 262
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.68 E-value=6.2e-05 Score=70.78 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=66.1
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccchhh-------------------------hHHHH
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLA-------------------------THLAE 204 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~~~-------------------------~~l~~ 204 (498)
.+++++|.|| ++||+.|+...|.+.++++++++ .+.|..|+++..... ..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 99999999999999999999974 478888887742211 23455
Q ss_pred hCCCCccccee-----eeeEEEEeC-CCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 205 RKPIGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 205 ~~~~~~~~~I~-----~~PTl~~f~-~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+ |. ..|+.+++- +|... ..+.| .++.++|++.+.+.
T Consensus 131 ~yg------v~~~~g~~~p~~~lID~~G~i~----~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYN------VLFDDSVSLRAFVLIDMNGIVQ----HLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTT------CEETTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CccccCCcccEEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHH
Confidence 555 88 899888875 45431 22223 35688999888764
No 263
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.68 E-value=2.5e-05 Score=75.03 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=60.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEccc----------------c-------------------
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD----------------I------------------- 196 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~----------------~------------------- 196 (498)
+.++.++.|+.+||++|+++.|+.+++.+. +.++|..++..- +
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 456789999999999999999998887664 445554433210 0
Q ss_pred ------------hhhhHHHHhCCCCcccceeeeeEEEEeCC-CCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 197 ------------RLATHLAERKPIGQIFFRRGLPSLVAFPP-GCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 197 ------------~~~~~l~~~~~~~~~~~I~~~PTl~~f~~-g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.....+++++| |+|.||+++... |.. ....|..+.+.|.+++.+.
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~g------v~gtPt~vi~~~~G~~-----~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLG------ANVTPAIYYMSKENTL-----QQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHT------CCSSCEEEEEETTTEE-----EEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCCE-----EEecCCCCHHHHHHHHHHH
Confidence 01123556666 999999999763 421 2567999999998887553
No 264
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.65 E-value=0.00013 Score=64.11 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=67.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe-cCCCC-----CcHHHHHHHHhcccc-ceEEEEEecccccHHHHHHcCCCCCCEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAI 334 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~~~~-----~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~l~~~f~V~~~Pti 334 (498)
+++.+ +++++.. +.+++++|. +-+.+ ..|.+..+|.+|.+. ++|+.|+.. +.++++.+|||.+.||+
T Consensus 22 ~t~~~-F~~~v~~---~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD--e~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 22 VSESR-LDDWLTQ---APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE--QSEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CCHHH-HHHHHHT---CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH--HHHHHHHHHTCCSSSEE
T ss_pred CCHHH-HHHHHhC---CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC--CCHHHHHHcCCccCCEE
Confidence 44444 5666642 224444554 21222 468888899999888 888888643 24789999999999999
Q ss_pred EEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
++||++.. .....|..+.+.|.+||++..
T Consensus 96 ilFk~G~~-v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 96 LVFTGGNY-RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEE-EEEEecCCCHHHHHHHHHHHh
Confidence 99997543 334578889999999998753
No 265
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.65 E-value=4.2e-05 Score=67.98 Aligned_cols=97 Identities=11% Similarity=0.062 Sum_probs=63.4
Q ss_pred CCcEEEEEec-CCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCC------------Ccccceee--
Q 010886 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI------------GQIFFRRG-- 216 (498)
Q Consensus 153 ~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~------------~~~~~I~~-- 216 (498)
+++++|.||+ .||++|....|.+.++.+++++. +.+..|+++........++++++ .+.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 5689999998 99999999999999999999865 78888888743222223333222 12344766
Q ss_pred ----------eeEEEEeCCCCcCCCCcccccC---CCCHHHHHHHHHHH
Q 010886 217 ----------LPSLVAFPPGCKSSDCMTRFEG---ELSVDAVTDWFATA 252 (498)
Q Consensus 217 ----------~PTl~~f~~g~~~~~~~~~Y~G---~r~~~~Iv~fv~k~ 252 (498)
.|+.+++-+.+.. ...|.| ....++|++.+++.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i---~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQV---VQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCE---EEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeE---EEEEcCCCcccCHHHHHHHHHHH
Confidence 8999998543332 123333 23456666666543
No 266
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.64 E-value=0.00012 Score=63.30 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=69.9
Q ss_pred CCcccccccchhhhhhhhhcCCCcEEEEEEecCCCC--CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCC--C
Q 010886 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A 331 (498)
Q Consensus 256 ~P~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~--~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~--~ 331 (498)
.|....++..+ ++++++.. ..++|.|+.+++.+ ..+.+..+|.+|++++.|+.++..+ .+.++++|||.+ .
T Consensus 5 ~plv~~~t~~~-f~~~~~~~--~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~--~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 5 SPLIGEIGPET-YSDYMSAG--IPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA--FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CCCSEECCHHH-HHHHHHTT--SCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT--TGGGTTTTTCCSSSS
T ss_pred cCceeccChHH-HHHHhcCC--CCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH--hHHHHHHcCCCcccC
Confidence 44444455544 44554422 22444455443322 2466677999998889999987432 356899999998 9
Q ss_pred CEEEEEeCCCCceeeec--CCCChhHHHHHHHhcccCCC
Q 010886 332 PAIVFLKDPGVKPVVYY--GSFNNSRLSEVMEQNKLQEL 368 (498)
Q Consensus 332 Pti~lfk~~~~~~~~y~--g~~~~~~L~~fi~~~~~~~v 368 (498)
||+++|+..+.+...+. |.++.+.|.+|+++..-..+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 99999986222223444 88999999999987644333
No 267
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.60 E-value=0.00038 Score=59.07 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=60.7
Q ss_pred EEEEEEecC---CCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 280 VKVIFFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 280 ~~vl~f~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
++|.|+++. |....+.+..++..+.+.+.|+.+... ....++++|+|.+.|++++|++++.....|.|..+.+.|
T Consensus 38 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l 115 (130)
T 2dml_A 38 WLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD--KHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAI 115 (130)
T ss_dssp EEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHH
T ss_pred EEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCC--CCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHH
Confidence 455555542 233456777788877766777777532 246799999999999999998766546778999999999
Q ss_pred HHHHHhc
Q 010886 357 SEVMEQN 363 (498)
Q Consensus 357 ~~fi~~~ 363 (498)
.+|+.+.
T Consensus 116 ~~~l~~~ 122 (130)
T 2dml_A 116 VDAALSA 122 (130)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 268
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.57 E-value=0.00012 Score=69.27 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=68.1
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------CC------------Cc
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (498)
.+++++|.|| +.||+.|....|.+.++.+++++. +.|..|+++........++++ ++ .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999999999753 788888887433333344444 21 12
Q ss_pred ccce-----eeeeEEEEeCCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 211 IFFR-----RGLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I-----~~~PTl~~f~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+| ...|+.+++-+.... ...+.| .++.++|++.+.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCV---RHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 4567 478999988643332 122224 46788998888765
No 269
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.57 E-value=6.8e-05 Score=59.93 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=48.9
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhC-CCCcccceeeeeEEEEeCCCCcCCCCccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK-PIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~-~~~~~~~I~~~PTl~~f~~g~~~~~~~~~ 235 (498)
++.|++|||++|+++.+.+++.. +.+..+|.+ ......+.+.+ + +.++|++. .+|..
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~------~~~vP~l~--~~g~~------- 65 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANG------RNTFPQIF--IGDYH------- 65 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHS------SCCSCEEE--ETTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCC------CCCcCEEE--ECCEE-------
Confidence 67899999999999888887652 567788887 32334577777 7 88999984 36632
Q ss_pred ccCCCCHHHHHHHHHH
Q 010886 236 FEGELSVDAVTDWFAT 251 (498)
Q Consensus 236 Y~G~r~~~~Iv~fv~k 251 (498)
-| ..++|.++..+
T Consensus 66 -i~--g~~~i~~~~~~ 78 (89)
T 2klx_A 66 -VG--GCDDLYALENK 78 (89)
T ss_dssp -CC--SHHHHHHHHHH
T ss_pred -Ee--ChHHHHHHHHc
Confidence 22 24567766544
No 270
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.56 E-value=5.7e-05 Score=67.02 Aligned_cols=95 Identities=7% Similarity=0.018 Sum_probs=59.7
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCC------------Ccccceeeee-
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRRGLP- 218 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~------------~~~~~I~~~P- 218 (498)
+++++|.|| +.||++|....|.+.++.+++++...|..|+++........++++++ .+.|++...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~ 114 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL 114 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccccc
Confidence 347888888 99999999999999999999975437777777643222222332221 1234488888
Q ss_pred ------EEEEeCCCCcCCCCcccccCCCC---HHHHHHHHHHH
Q 010886 219 ------SLVAFPPGCKSSDCMTRFEGELS---VDAVTDWFATA 252 (498)
Q Consensus 219 ------Tl~~f~~g~~~~~~~~~Y~G~r~---~~~Iv~fv~k~ 252 (498)
|+++ ++|... ..+.|... .+.+++-+.+.
T Consensus 115 ~g~~~~~~li-~~G~i~----~~~~g~~~~~~~~~~~~~l~~~ 152 (159)
T 2a4v_A 115 SGSIRSHFIF-VDGKLK----FKRVKISPEVSVNDAKKEVLEV 152 (159)
T ss_dssp SCBCCEEEEE-ETTEEE----EEEESCCHHHHHHHHHHHHHHH
T ss_pred CCccceEEEE-cCCEEE----EEEccCCccccHHHHHHHHHHH
Confidence 6666 777652 34456543 34444444443
No 271
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.51 E-value=0.00023 Score=62.57 Aligned_cols=96 Identities=14% Similarity=0.164 Sum_probs=58.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecC-----CCCCcHHHHHHHHhccccce--EEEEEecccccHHHHHHcCCCCCCEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKT-----GERASPFVRQISRNYWAYAS--FAFVLWREEESSIWWNTFEVESAPAI 334 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~-----~~~~~~~~~~~A~~~~~~~~--f~~v~~~~~~~~~l~~~f~V~~~Pti 334 (498)
+++.+ +++++.... .++|.|+++. |....|.+..++.++ +.+. |+.|+.. +..+++++|+|.+.||+
T Consensus 22 l~~~~-f~~~i~~~~--~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d--~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 22 VEAST-VDDWIKRVG--DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLE--QSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp CCCC---------CC--SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHH--HHHHHHHTTTCCSSSEE
T ss_pred ccccc-HHHHHHhCC--CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECC--CCHHHHHhcCCCcCCeE
Confidence 45443 666665332 2444443321 223467788888888 7777 7777532 23679999999999999
Q ss_pred EEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
++|+++ .....+.|..+.+.|.+||++..
T Consensus 96 ~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 96 LVFTDG-KLRGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp EEESCC-----CEESCCCHHHHHHHHHHHH
T ss_pred EEEeCC-EEEEEEeCCCCHHHHHHHHHHHh
Confidence 999764 34446789889999999998754
No 272
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.45 E-value=0.00045 Score=62.38 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.8
Q ss_pred CCCcEEEEEecCC-CCCCCCChHHHHHHHHHhhccceEEEEEcc
Q 010886 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~l~p~~~~~A~~l~~~i~va~Vdc~ 194 (498)
.+++++|.||+.| |+.|+...|.+++++++ ..+.|..|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECC
Confidence 3678999999999 99999999999999988 45778888876
No 273
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.45 E-value=0.00018 Score=67.48 Aligned_cols=98 Identities=13% Similarity=0.023 Sum_probs=67.3
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------CC------------Cc
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (498)
.+++++|.|| +.||++|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 3578999999 999999999999999999999754 788888887433223333333 11 12
Q ss_pred cccee------eeeEEEEeCCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~------~~PTl~~f~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+|. ..|+.+++-+.... ...+.| .++.+++++.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGIL---RQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 45574 69999998644332 122223 36788898888764
No 274
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.43 E-value=0.00057 Score=56.61 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=58.9
Q ss_pred cEEEE-EEecC---CCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 010886 279 KVKVI-FFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (498)
Q Consensus 279 ~~~vl-~f~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~ 354 (498)
+++++ |+++. |....+.+..++..+.+.+.|+.++... ..+++++|+|.+.|++++|++ +.....+.|..+.+
T Consensus 18 ~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~ 94 (112)
T 2voc_A 18 GVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMSIPTLLVLKD-GEVVETSVGFKPKE 94 (112)
T ss_dssp SEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCSBSEEEEEET-TEEEEEEESCCCHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCcccEEEEEeC-CEEEEEEeCCCCHH
Confidence 35554 44432 2223466677777776677787776432 356999999999999999964 43445678999999
Q ss_pred HHHHHHHhccc
Q 010886 355 RLSEVMEQNKL 365 (498)
Q Consensus 355 ~L~~fi~~~~~ 365 (498)
.|.+|++.+.-
T Consensus 95 ~l~~~l~~~~~ 105 (112)
T 2voc_A 95 ALQELVNKHLL 105 (112)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHHHH
Confidence 99999987643
No 275
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.43 E-value=0.00058 Score=55.56 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=64.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
++..+ ++..+.. ++++++.|. +.| ....+.+..++..+.+...|+.+... ....++++|+|.+.|++++|
T Consensus 9 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 9 LTEEN-FDEVIRN---NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCTTT-HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHHhc---CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEEEE
Confidence 44444 5555543 335555544 322 12245666677777777778777632 24789999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ +.....+.|..+.+.|.+||++.
T Consensus 83 ~~-g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 83 VN-GQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred cC-CcEEEeeeccCCHHHHHHHHHHH
Confidence 65 44445678999999999999863
No 276
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.41 E-value=0.00097 Score=63.51 Aligned_cols=83 Identities=18% Similarity=0.139 Sum_probs=56.2
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccc---cceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc----eeeecC
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK----PVVYYG 349 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~----~~~y~g 349 (498)
++|.|+++-| ....|.+..++..+.+ .+.|+.+.........++++|+|.++||+++|+++... .+.+.|
T Consensus 33 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g 112 (244)
T 3q6o_A 33 WAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG 112 (244)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC
Confidence 4444555422 2245777778887776 67777776433335789999999999999999974432 234455
Q ss_pred CCChhHHHHHHHhc
Q 010886 350 SFNNSRLSEVMEQN 363 (498)
Q Consensus 350 ~~~~~~L~~fi~~~ 363 (498)
.+.+.|.++|.+.
T Consensus 113 -~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 113 -ADVQTLRERLIDA 125 (244)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHH
Confidence 5888888888653
No 277
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.38 E-value=3.2e-05 Score=66.99 Aligned_cols=66 Identities=15% Similarity=0.227 Sum_probs=45.9
Q ss_pred CcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc---hh-hhHHHHhCCCCcccceeeeeEEE
Q 010886 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~---~~-~~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
|++.+..+. ++.|++|||++|+++.+.+++.. +.+..+|++.+ +. ...|++.++ +.++|++.
T Consensus 20 ~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g------~~~vP~l~ 85 (130)
T 2cq9_A 20 IQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 85 (130)
T ss_dssp HHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHS------SCCSSEEE
T ss_pred HHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhC------CCCcCEEE
Confidence 445555554 34499999999999999888753 45667888754 21 124777788 89999984
Q ss_pred EeCCCC
Q 010886 222 AFPPGC 227 (498)
Q Consensus 222 ~f~~g~ 227 (498)
.+|.
T Consensus 86 --i~G~ 89 (130)
T 2cq9_A 86 --VNGT 89 (130)
T ss_dssp --ETTE
T ss_pred --ECCE
Confidence 4663
No 278
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.37 E-value=0.001 Score=57.17 Aligned_cols=92 Identities=20% Similarity=0.200 Sum_probs=62.6
Q ss_pred hhhhhhhcCCCcEEEEEEe-cC---CCCCcHHHHHHHHhcccc---ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC
Q 010886 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~-~~---~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~ 340 (498)
++..+.. ++++++.|. +. |....+.+..++..+.+. +.|+.+... +...++++|+|.++|++++|+++
T Consensus 27 ~~~~~~~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 27 FDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--SASMLASKFDVSGYPTIKILKKG 101 (140)
T ss_dssp HHHHHTT---CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--TCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--ccHHHHHHCCCCccCeEEEEECC
Confidence 4555532 345555554 32 233456777777776654 666665422 23779999999999999999764
Q ss_pred CCceeeecCCCChhHHHHHHHhcccC
Q 010886 341 GVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (498)
Q Consensus 341 ~~~~~~y~g~~~~~~L~~fi~~~~~~ 366 (498)
. ...|.|..+.+.|.+||+...-+
T Consensus 102 ~--~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 102 Q--AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp E--EEECCSCCCHHHHHHHHHHHHSS
T ss_pred c--EEEcCCCCCHHHHHHHHHHhcCC
Confidence 3 66789999999999999976433
No 279
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.36 E-value=0.00016 Score=64.06 Aligned_cols=87 Identities=16% Similarity=0.252 Sum_probs=54.5
Q ss_pred HHhcccCCCCcccccchhhhccCCCCCcCCCCCCceeEEEEEeCC-CchhhHHHHHHHHHHHHhhcccccccccccCCCc
Q 010886 360 MEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADTDQSL 438 (498)
Q Consensus 360 i~~~~~~~vp~lt~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~-~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~ 438 (498)
++.|++|+|++++.+|+... .. .+.+ +.++++.. .+++.+.+++.++++|+
T Consensus 8 ~~~~~~PLV~e~t~en~~~~-~~-----~~~~-----~~~l~f~~~~~~~~~~~~~~~~~vAk----------------- 59 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKI-FG-----GEIK-----THILLFLPKSVSDYDGKLSNFKTAAE----------------- 59 (147)
T ss_dssp -------CEEECCTTTHHHH-HS-----SSCC-----EEEEEECCTTSSSHHHHHHHHHHHHH-----------------
T ss_pred hhhccCCeeEEeccccHHHH-hc-----CCCc-----eEEEEEecCCcHhHHHHHHHHHHHHH-----------------
Confidence 56789999999999996442 21 1111 33343443 34457888999999888
Q ss_pred hHHHHhccCCceEEEEEeC--ccCchhhhhhhhhhheeeeccC--Cceeeeeecc
Q 010886 439 APAAVAFRNKRLTFAWLDG--EAQDVSFIMLISLFYVDFFLHS--DLFVLWLLFP 489 (498)
Q Consensus 439 ~~~a~~~~~~~~~f~wvd~--~~q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 489 (498)
+|+++ +.|+|+|+ +.... ..++|+-+ |.|.++|.+.
T Consensus 60 -----~fkgk-i~Fv~vd~~~~~~~~---------~l~~fGl~~~~~P~v~i~~~ 99 (147)
T 3bj5_A 60 -----SFKGK-ILFAFIDSDHTDNQR---------ILEFFGLKKEECPAVRLITL 99 (147)
T ss_dssp -----TTTTT-CEEEEECTTCGGGHH---------HHHHTTCCGGGCSEEEEEEC
T ss_pred -----HcCCc-eEEEEEecchHhHHH---------HHHHcCCCcccCCEEEEEec
Confidence 88875 89999998 55555 44455544 6999999875
No 280
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.35 E-value=0.0011 Score=55.53 Aligned_cols=94 Identities=23% Similarity=0.285 Sum_probs=61.0
Q ss_pred cchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC
Q 010886 264 KESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (498)
Q Consensus 264 ~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~ 340 (498)
+.+.+++.++......++|.|+++-| ....+.+..++..+.+ +.|+.+... +..+++++|+|.+.|++++|++
T Consensus 18 t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~- 93 (116)
T 3qfa_C 18 SKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASECEVKSMPTFQFFKK- 93 (116)
T ss_dssp CHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT--TTHHHHHHTTCCSSSEEEEESS-
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHcCCccccEEEEEeC-
Confidence 33446666653322234444555422 2234566667777655 677776532 2478999999999999999965
Q ss_pred CCceeeecCCCChhHHHHHHHh
Q 010886 341 GVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 341 ~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
+.....+.|. +.+.|.++|++
T Consensus 94 G~~~~~~~G~-~~~~l~~~l~~ 114 (116)
T 3qfa_C 94 GQKVGEFSGA-NKEKLEATINE 114 (116)
T ss_dssp SSEEEEEESC-CHHHHHHHHHH
T ss_pred CeEEEEEcCC-CHHHHHHHHHH
Confidence 3344457888 89999999976
No 281
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.34 E-value=0.00032 Score=64.25 Aligned_cols=97 Identities=9% Similarity=-0.053 Sum_probs=67.2
Q ss_pred CCcEEEEEec-CCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC----CC------------Ccccce
Q 010886 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----PI------------GQIFFR 214 (498)
Q Consensus 153 ~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~----~~------------~~~~~I 214 (498)
+++++|.||+ .||+.|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+.|+|
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 5789999995 99999999999999999998753 688888877443333445554 32 124557
Q ss_pred e------eeeEEEEeCCCCcCCCCcccccCC----CCHHHHHHHHHHH
Q 010886 215 R------GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (498)
Q Consensus 215 ~------~~PTl~~f~~g~~~~~~~~~Y~G~----r~~~~Iv~fv~k~ 252 (498)
. ..|+.+++-..... ...+.|. ++.++|.+.+.+.
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i---~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGII---QAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp EETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 6 36999888643332 2233343 4688888888765
No 282
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.34 E-value=0.0011 Score=62.30 Aligned_cols=42 Identities=10% Similarity=-0.158 Sum_probs=37.1
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~ 194 (498)
.++++||.|+|.||+.|+ -.|.++++.+++++. +.|..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 467999999999999998 789999999999765 688889886
No 283
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.33 E-value=0.001 Score=56.35 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=57.3
Q ss_pred cEEEEEE-ecCC---CCCcHHHHHHHHhcc----ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC
Q 010886 279 KVKVIFF-SKTG---ERASPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (498)
Q Consensus 279 ~~~vl~f-~~~~---~~~~~~~~~~A~~~~----~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~ 350 (498)
+++++.| ++.| ....+.+..++..+. +.+.|+.+... ....++++|+|.+.|++++|++ +.....|.|.
T Consensus 26 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-g~~~~~~~G~ 102 (133)
T 1x5d_A 26 DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRGFPTIKIFQK-GESPVDYDGG 102 (133)
T ss_dssp SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT--TCCHHHHHHTCCSSSEEEEEET-TEEEEEECSC
T ss_pred CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECC--CCHHHHHhCCCCeeCeEEEEeC-CCceEEecCC
Confidence 4555544 4322 223466666777665 55667666532 2367999999999999999987 4445678899
Q ss_pred CChhHHHHHHHhc
Q 010886 351 FNNSRLSEVMEQN 363 (498)
Q Consensus 351 ~~~~~L~~fi~~~ 363 (498)
.+.+.|.+||.+.
T Consensus 103 ~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 103 RTRSDIVSRALDL 115 (133)
T ss_dssp CSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999999999864
No 284
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.32 E-value=0.001 Score=53.89 Aligned_cols=95 Identities=22% Similarity=0.283 Sum_probs=61.4
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.++... +++.++ |+++.+ ....+.+..++..+.+ +.|+.+... +...++++|+|.+.|++++|
T Consensus 5 i~~~~~~~~~l~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 5 IESKTAFQEALDAAG-DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp CCSHHHHHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred cCCHHHHHHHHHhcC-CCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhh--hhHHHHHHcCCCcCcEEEEE
Confidence 344444566665332 345444 444432 1223556667776654 677776532 24789999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHh
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
+++ .....+.|. +.+.|.+|+++
T Consensus 81 ~~g-~~~~~~~g~-~~~~l~~~l~~ 103 (105)
T 3m9j_A 81 KKG-QKVGEFSGA-NKEKLEATINE 103 (105)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHH
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHH
Confidence 754 333457888 88999999976
No 285
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.32 E-value=0.00022 Score=63.45 Aligned_cols=100 Identities=9% Similarity=0.072 Sum_probs=56.6
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCCC------------ccccee--
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG------------QIFFRR-- 215 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~~------------~~~~I~-- 215 (498)
.+++++|.|| +.||+.|..-.|.+.++.++++.. +.+..|+.+........++++++. +.|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 4678999998 999999999999999888888765 577778877543334445554421 123342
Q ss_pred ---------eeeEEEEeC-CCCcCCC-CcccccCCCCHHHHHHHHHH
Q 010886 216 ---------GLPSLVAFP-PGCKSSD-CMTRFEGELSVDAVTDWFAT 251 (498)
Q Consensus 216 ---------~~PTl~~f~-~g~~~~~-~~~~Y~G~r~~~~Iv~fv~k 251 (498)
..|+..++- +|..... ......+..+.++|.+.++.
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 457766664 4533100 00012345577788777643
No 286
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.31 E-value=0.0011 Score=56.01 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=65.4
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccc-cceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
++..+ +++.+.+ .++|.|+++.| ....+.+..++..+.+ .+.|+.+... +...++++|+|...||+++|
T Consensus 12 l~~~~-f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 12 ITDEN-WRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT--EQPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp CCTTT-HHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc--CCHHHHHHcCCcccCEEEEE
Confidence 44433 4555432 26666666532 1234555667766654 5677776532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhcccCCCC
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKLQELP 369 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~~~~~vp 369 (498)
+++. ...|.|..+.+.|.+||++...+.+.
T Consensus 85 ~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 85 KDGE--FRRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp ETTE--EEECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred eCCe--EEEeecCCCHHHHHHHHHHHhhccCC
Confidence 7543 46789999999999999986544333
No 287
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.28 E-value=0.0007 Score=56.81 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=50.0
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+..++.++.+.+.++.+...+ ..+++++|+|.+.|++++|++ +.....+.|..+.+.|.+||++
T Consensus 50 ~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~ 116 (119)
T 1w4v_A 50 GPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKN-GDVVDKFVGIKDEDQLEAFLKK 116 (119)
T ss_dssp HHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeC-CcEEEEEcCCCCHHHHHHHHHH
Confidence 355566777776667777775322 367999999999999999964 3334467898899999999975
No 288
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.27 E-value=0.0008 Score=54.61 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=56.4
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
++++++.|. +.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 20 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 20 SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRD-GKVIDKKVGALPK 96 (107)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeC-CEEEEEecCCCCH
Confidence 346555554 322 112345566777776667777775432 367999999999999999964 3334457898899
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.+||++.
T Consensus 97 ~~l~~~l~~~ 106 (107)
T 2i4a_A 97 SQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999864
No 289
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.25 E-value=0.0037 Score=66.61 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=58.0
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccc---cceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCC---ceeeecCC
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYGS 350 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~---~~~~y~g~ 350 (498)
++|.|+++-| ....|.+..++..+.+ .+.|+.|+..+.+..+++++|+|.++||+++|+++.. ....+.|.
T Consensus 33 vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~ 112 (519)
T 3t58_A 33 WAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAG 112 (519)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSS
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCC
Confidence 4444555422 2345777778888776 5777777643323578999999999999999996332 33455677
Q ss_pred CChhHHHHHHHhc
Q 010886 351 FNNSRLSEVMEQN 363 (498)
Q Consensus 351 ~~~~~L~~fi~~~ 363 (498)
.+.+.|.++|.+.
T Consensus 113 ~~~~~L~~~l~~~ 125 (519)
T 3t58_A 113 ANVQTLRMRLIDA 125 (519)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8888888888753
No 290
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.25 E-value=0.0013 Score=54.36 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=63.5
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecC---CCCCcHHHHHHHHhccc---cceEEEEEecccccHHHHHHcCCCCCCEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~---~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Pti 334 (498)
++..+ ++..+.+ ++++++ |+++. |....+.+..++..+.+ .+.|+.+...+ ...++++|+|.+.|++
T Consensus 12 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 12 LRKSN-FAEALAA---HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYPTI 85 (120)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSSEE
T ss_pred echhh-HHHHHcc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCcccEE
Confidence 44433 4555543 235444 44432 33445777777776653 45666665322 3568999999999999
Q ss_pred EEEeCCCC-ceeeecCCCChhHHHHHHHhcc
Q 010886 335 VFLKDPGV-KPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 335 ~lfk~~~~-~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
++|+++.. .+..|.|..+.+.|.+||++..
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 99986543 2367889989999999998753
No 291
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.25 E-value=0.0008 Score=55.09 Aligned_cols=81 Identities=19% Similarity=0.363 Sum_probs=57.6
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
++|.|+++.+ ....+.+..++..+.+.+.|+.+...+ .+.++++|+|.+.|++++|+++ .....+.|..+.+.|
T Consensus 25 vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l 101 (111)
T 3gnj_A 25 CLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFKDG-EYKGKMAGDVEDDEV 101 (111)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EEEEEEESSCCHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEEECC-EEEEEEeccCCHHHH
Confidence 4444554432 123456666777777678888876432 4789999999999999999753 334467899999999
Q ss_pred HHHHHhc
Q 010886 357 SEVMEQN 363 (498)
Q Consensus 357 ~~fi~~~ 363 (498)
.+||++.
T Consensus 102 ~~~l~~~ 108 (111)
T 3gnj_A 102 EQMIADV 108 (111)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 292
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.24 E-value=0.001 Score=57.21 Aligned_cols=83 Identities=19% Similarity=0.332 Sum_probs=58.8
Q ss_pred CcEEEE-EEecCC-CC--CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl-~f~~~~-~~--~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
++++++ |+++.| .| ..+.+..++..+.+.+.|+.+... ....++++|+|.+.|++++|.+++. ...+.|..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~ 127 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVD--KEPELARDFGIQSIPTIWFVPMKGE-PQVNMGALSK 127 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECC--CCHHHHHHcCCCCcCEEEEEeCCCC-EEEEeCCCCH
Confidence 345444 554432 11 345666677777777777777532 2478999999999999999965443 3578999999
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.+||+..
T Consensus 128 ~~l~~~l~~~ 137 (141)
T 3hxs_A 128 EQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 293
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.24 E-value=6.1e-05 Score=63.47 Aligned_cols=64 Identities=6% Similarity=0.113 Sum_probs=45.7
Q ss_pred ccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccce---EEEEEcccch----hhhHHHHhCCCCcccceeeeeEE
Q 010886 148 SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIAN---TGMVELGDIR----LATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 148 ~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~---va~Vdc~~~~----~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
+.+++. .++.|++|||++|+++.+.+++.+ +. +..+|+++++ ....|++.+| ++++|++
T Consensus 14 ~~i~~~--~vv~f~~~~Cp~C~~~~~~L~~~~------~~~~~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~v 79 (114)
T 2hze_A 14 QRLANN--KVTIFVKYTCPFCRNALDILNKFS------FKRGAYEIVDIKEFKPENELRDYFEQITG------GKTVPRI 79 (114)
T ss_dssp TTCCTT--CEEEEECTTCHHHHHHHHHHTTSC------BCTTSEEEEEGGGSSSHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHhccC--CEEEEEeCCChhHHHHHHHHHHcC------CCcCceEEEEccCCCChHHHHHHHHHHhC------CCCcCEE
Confidence 344443 467899999999998888776543 34 8889998653 1235788888 8899997
Q ss_pred EEeCCCC
Q 010886 221 VAFPPGC 227 (498)
Q Consensus 221 ~~f~~g~ 227 (498)
.+ +|.
T Consensus 80 ~i--~g~ 84 (114)
T 2hze_A 80 FF--GKT 84 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 43 663
No 294
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.23 E-value=5e-05 Score=67.29 Aligned_cols=66 Identities=15% Similarity=0.227 Sum_probs=45.6
Q ss_pred CcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc---hh-hhHHHHhCCCCcccceeeeeEEE
Q 010886 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~---~~-~~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
+++.+.++. ++.|++|||++|+++.+.+++.. +.+..+|++.+ +. ...|++.++ +.++|++.
T Consensus 42 ~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g------~~tvP~if 107 (146)
T 2ht9_A 42 IQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 107 (146)
T ss_dssp HHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHS------CCCSCEEE
T ss_pred HHHHhcCCC--EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhC------CCCcCeEE
Confidence 444555553 34499999999999999888763 35667887754 21 124777888 88999984
Q ss_pred EeCCCC
Q 010886 222 AFPPGC 227 (498)
Q Consensus 222 ~f~~g~ 227 (498)
.+|.
T Consensus 108 --i~G~ 111 (146)
T 2ht9_A 108 --VNGT 111 (146)
T ss_dssp --ETTE
T ss_pred --ECCE
Confidence 4663
No 295
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.22 E-value=0.0017 Score=52.45 Aligned_cols=97 Identities=25% Similarity=0.262 Sum_probs=60.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.+... .+++.++.| ++.+ ....+.+..++..+.+.+.+..+... +...++++|+|.+.|+++++
T Consensus 5 l~~~~~~~~~l~~~-~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 5 VKDKADLDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD--ECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp CCSHHHHHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc--chHHHHHHcCCCcccEEEEE
Confidence 44433355555532 234555544 4322 11235556677777566677776532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++ .....+.| .+.+.|.+||++.
T Consensus 82 ~~G-~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNG-VKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETT-EEEEEEES-CCHHHHHHHHHHT
T ss_pred cCC-cEEEEEcC-CCHHHHHHHHHHh
Confidence 754 33345678 6888899998763
No 296
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.22 E-value=0.00015 Score=56.57 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=48.4
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchh-hhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCccc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~-~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~ 235 (498)
++.|++|||++|+++.+.+++. .+.+..+|.++++. ...+.+.++ +.++|++. .+|..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~------~~~vP~l~--~~g~~------- 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSG------RTTVPQIF--IDAQH------- 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHS------SCCSCEEE--ETTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECCEE-------
Confidence 5678999999999988877754 25677788875432 234666677 88999984 46632
Q ss_pred ccCCCCHHHHHHHHHH
Q 010886 236 FEGELSVDAVTDWFAT 251 (498)
Q Consensus 236 Y~G~r~~~~Iv~fv~k 251 (498)
-| ..++|.+++..
T Consensus 62 -i~--g~~~i~~~~~~ 74 (82)
T 1fov_A 62 -IG--GYDDLYALDAR 74 (82)
T ss_dssp -EE--SHHHHHHHHHT
T ss_pred -Ee--CHHHHHHHHHC
Confidence 22 24667777644
No 297
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.21 E-value=0.0015 Score=60.80 Aligned_cols=90 Identities=17% Similarity=0.200 Sum_probs=63.3
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
++|.|+++-| ....+.+..++..+.+.+.|+.|... +...++++|+|.+.||+++|+++ .....+.|..+.+.|
T Consensus 117 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l 193 (210)
T 3apq_A 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCG--DDRMLCRMKGVNSYPSLFIFRSG-MAAVKYNGDRSKESL 193 (210)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT--TCHHHHHHTTCCSSSEEEEECTT-SCCEECCSCCCHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECC--ccHHHHHHcCCCcCCeEEEEECC-CceeEecCCCCHHHH
Confidence 4555555432 22346667777777777777777532 24779999999999999999654 445677899999999
Q ss_pred HHHHHhcccCCCCccc
Q 010886 357 SEVMEQNKLQELPQLR 372 (498)
Q Consensus 357 ~~fi~~~~~~~vp~lt 372 (498)
.+||++..-+.+.+++
T Consensus 194 ~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 194 VAFAMQHVRSTVTELS 209 (210)
T ss_dssp HHHHHHHHHCCSSCC-
T ss_pred HHHHHHhCcccceecC
Confidence 9999986555555544
No 298
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.21 E-value=0.00063 Score=57.79 Aligned_cols=69 Identities=16% Similarity=0.330 Sum_probs=46.7
Q ss_pred CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
..+.+..++..+.+.+.++.+...+ ..+++++|+|.++|++++|++ +.....+.|..+.++|.+||++.
T Consensus 53 ~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 53 IAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp THHHHTTC-------CEEEEEETTS--CTTTGGGGTCCBSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 3566666777676667777776432 356899999999999999965 43444678998999999999763
No 299
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.21 E-value=0.0013 Score=53.64 Aligned_cols=95 Identities=13% Similarity=0.137 Sum_probs=59.7
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccc---cceEEEEEecccccHHHHHHcCCCCCCEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIV 335 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~ 335 (498)
++..+ +++.+.+ ..++|.|+++.| ....+.+..++..+.. .+.++.+... ...+++++|+|.+.|+++
T Consensus 10 l~~~~-~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 10 LTENN-FDDTIAE---GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--AERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCTTT-HHHHHHS---SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--TCHHHHHHTTCCSSSEEE
T ss_pred cChhh-HHHHhcC---CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--ccHhHHHhcCCCcccEEE
Confidence 44444 5555542 224444555432 1123455556655442 3455555422 247899999999999999
Q ss_pred EEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 336 lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+|+++ .....+.|..+.+.|.+||+++
T Consensus 84 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 99764 3445678999999999999864
No 300
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.20 E-value=0.00026 Score=63.63 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=65.0
Q ss_pred cCCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCC------------Cccccee-
Q 010886 151 HDSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI------------GQIFFRR- 215 (498)
Q Consensus 151 ~~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~------------~~~~~I~- 215 (498)
.+++++++.|| +.||++|..-.|.+.++.++++.. +.+..|+.+........++++++ .+.|+|.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~ 110 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYH 110 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCcc
Confidence 46788889998 999999999999999998888765 67888887754333444554443 1233353
Q ss_pred ---------eeeEEEEeC-CCCcCCC-CcccccCCCCHHHHHHHHHHH
Q 010886 216 ---------GLPSLVAFP-PGCKSSD-CMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 216 ---------~~PTl~~f~-~g~~~~~-~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
..|+..++- +|..... ......+..+.+++++-+++.
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 356666664 4543100 000122445788888887765
No 301
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.20 E-value=0.00032 Score=63.73 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=62.3
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhCCC------------Ccccceee--
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI------------GQIFFRRG-- 216 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~~~------------~~~~~I~~-- 216 (498)
+++++|.|| +.||+.|..-.|.+.++.+++++. +.|..|.++........++++++ .+.|.+..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 557788887 999999999999999999999865 67888888754333334444332 12344643
Q ss_pred ----------eeEEEEeC-CCCcCCCCcccccC---CCCHHHHHHHHHHH
Q 010886 217 ----------LPSLVAFP-PGCKSSDCMTRFEG---ELSVDAVTDWFATA 252 (498)
Q Consensus 217 ----------~PTl~~f~-~g~~~~~~~~~Y~G---~r~~~~Iv~fv~k~ 252 (498)
.|+.+++- +|... ..|.| ....++|++.+++.
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~----~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIV----EAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEE----EEECSCCSTTHHHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEE----EEEcCCCCCCCHHHHHHHHHHH
Confidence 57788875 45431 22332 34566677666543
No 302
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.20 E-value=0.00056 Score=55.89 Aligned_cols=82 Identities=11% Similarity=0.167 Sum_probs=48.1
Q ss_pred CcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
++++++.| ++-+ ....+.+..++..+ +.+.|+.+.... ..+++++|+|.+.||+++|+++ .....+.|..+.
T Consensus 18 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~~~ 93 (105)
T 4euy_A 18 QQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYNG-KEILRESRFISL 93 (105)
T ss_dssp SSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CCCCEEEEEETT-EEEEEEESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeCC-eEEEEEeCCcCH
Confidence 34555544 4422 22345666677766 456777765432 3679999999999999999853 334556898899
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.++|++.
T Consensus 94 ~~l~~~l~~~ 103 (105)
T 4euy_A 94 ENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 303
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.19 E-value=0.0013 Score=53.99 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=51.2
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+.+.|+.+.... ..+++++|+|.+.|++++|++ +.....+.|..+.+.|.+||++.
T Consensus 44 ~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 44 SPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKG-EQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcC-CEEEEEecCCCCHHHHHHHHHHH
Confidence 355566777776667777776432 467999999999999999964 33334578988999999999863
No 304
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.19 E-value=9e-05 Score=63.00 Aligned_cols=69 Identities=12% Similarity=0.273 Sum_probs=47.8
Q ss_pred CcccccCCCcEEEEEecCCCCCCCCC-hHHHHHHHHHhhccceEEEEEcccch----hhhHHHHhCCCCcccceeeeeEE
Q 010886 146 FPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~i~va~Vdc~~~~----~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
+++.++... ++.|++|||++|+++ .+.+++... +.+.+..+|.++++ ....|++.++ +.++|++
T Consensus 18 ~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g------~~tvP~v 86 (118)
T 3c1r_A 18 VKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEING------QRTVPNI 86 (118)
T ss_dssp HHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhC------CCCcCEE
Confidence 444555444 556999999999988 777665431 23678889998653 1235777788 8899997
Q ss_pred EEeCCCC
Q 010886 221 VAFPPGC 227 (498)
Q Consensus 221 ~~f~~g~ 227 (498)
|.+|+
T Consensus 87 --fi~g~ 91 (118)
T 3c1r_A 87 --YINGK 91 (118)
T ss_dssp --EETTE
T ss_pred --EECCE
Confidence 55663
No 305
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.18 E-value=0.0015 Score=52.99 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=61.8
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
++..+ ++..++. +++.++.|. +.+ ....+.+..++..+.+.+.++.+... +..+++++|+|.+.|++++|
T Consensus 6 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 6 VTDQN-FDETLGQ---HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVD--ENPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ccHhH-HHHHhcC---CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECC--CCHhHHHhCCCCcCCEEEEE
Confidence 34433 3455543 235555554 322 11235556677777666777777532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++ .....+.|..+.+.|.+|+++.
T Consensus 80 ~~g-~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 80 KDG-QPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred eCC-cEeeeEeCCCCHHHHHHHHHHH
Confidence 653 3334578988999999999864
No 306
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.18 E-value=0.0012 Score=53.33 Aligned_cols=82 Identities=21% Similarity=0.282 Sum_probs=57.7
Q ss_pred cEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 010886 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (498)
Q Consensus 279 ~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~ 354 (498)
++.++.|. +.| ....+.+..++..+.+.+.++.+... ...+++++|+|.+.|++++|++ +.....+.|..+.+
T Consensus 20 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~ 96 (106)
T 3die_A 20 GVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVD--ENPSTAAKYEVMSIPTLIVFKD-GQPVDKVVGFQPKE 96 (106)
T ss_dssp SEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSBSEEEEEET-TEEEEEEESCCCHH
T ss_pred CcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECC--cCHHHHHhCCCcccCEEEEEeC-CeEEEEEeCCCCHH
Confidence 35555544 322 12345666677777766777777642 2477999999999999999974 33444678998999
Q ss_pred HHHHHHHhc
Q 010886 355 RLSEVMEQN 363 (498)
Q Consensus 355 ~L~~fi~~~ 363 (498)
.|.+||++.
T Consensus 97 ~l~~~l~~~ 105 (106)
T 3die_A 97 NLAEVLDKH 105 (106)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999863
No 307
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.17 E-value=0.00041 Score=62.49 Aligned_cols=42 Identities=10% Similarity=0.085 Sum_probs=34.6
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHh--hccceEEEEEc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL--EGIANTGMVEL 193 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l--~~~i~va~Vdc 193 (498)
+.++.+++|+.+||++|+++.|...++.+++ .+.+++...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 4677899999999999999999999998888 66666655543
No 308
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.17 E-value=0.0011 Score=54.07 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=56.6
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
+++.++.|. +.| ....+.+..++..+.+.+.++.+...+ ..+++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (108)
T 2trx_A 20 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 96 (108)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEEeC-CEEEEEEecCCCH
Confidence 345555554 322 112455666777776667777765322 367999999999999999965 3334457898899
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.+||++.
T Consensus 97 ~~l~~~l~~~ 106 (108)
T 2trx_A 97 GQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999763
No 309
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.17 E-value=0.0024 Score=62.07 Aligned_cols=98 Identities=10% Similarity=0.181 Sum_probs=68.7
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEec---CCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEe
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk 338 (498)
++..+ +++.+.......++|.|+.+ .|....|.+..++.++.+.+.|+.|... +.+.++++|+|.+.||+++|+
T Consensus 12 ~~~~~-f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~ 88 (287)
T 3qou_A 12 INESN-LQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCD--AEQMIAAQFGLRAIPTVYLFQ 88 (287)
T ss_dssp CCTTT-HHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETT--TCHHHHHTTTCCSSSEEEEEE
T ss_pred CCHHH-HHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCc--cCHHHHHHcCCCCCCeEEEEE
Confidence 55544 56666432223345555554 2344668888888888777788877643 247899999999999999997
Q ss_pred CCCCceeeecCCCChhHHHHHHHhc
Q 010886 339 DPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 339 ~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ .....+.|..+.+.+.+|+...
T Consensus 89 ~G-~~~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 89 NG-QPVDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp TT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred CC-EEEEEeeCCCCHHHHHHHHHHH
Confidence 54 3334578998999999999875
No 310
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.16 E-value=0.0021 Score=60.07 Aligned_cols=42 Identities=10% Similarity=-0.189 Sum_probs=36.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~ 194 (498)
.++++||.|+|.||+.| .-.|.++++.+++++. +.|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 46799999999999999 6789999999999765 688888875
No 311
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.16 E-value=0.00099 Score=56.62 Aligned_cols=83 Identities=18% Similarity=0.192 Sum_probs=58.0
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
++++++.|. +-| ....+.+..++..+.+.+.++.+... ....++++|+|.+.|+++++++ +.....+.|..+.
T Consensus 42 ~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLD--KNESLARKFSVKSLPTIILLKN-KTMLARKDHFVSS 118 (128)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGG--GCHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHcCCCCcCEEEEEEC-CEEEEEecCCCCH
Confidence 446555554 322 22345666677777666777777532 2478999999999999999965 4444567899999
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.+||+++
T Consensus 119 ~~l~~~l~~~ 128 (128)
T 3ul3_B 119 NDLIALIKKH 128 (128)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 9999999763
No 312
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.15 E-value=0.00076 Score=64.58 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=67.6
Q ss_pred CCCcEEEEEec-CCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------CC------------Cc
Q 010886 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (498)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (498)
.+++++|.||+ .||+.|..-.|.+.++++++++. +.|..|+++........++++ ++ .+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35789999999 99999999999999999999865 688888887543333333332 11 23
Q ss_pred cccee------eeeEEEEeCCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~------~~PTl~~f~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|++. .+|+.+++-+.... ...+.| .++.+++++.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I---~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVL---RQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 45577 68999888543332 112222 56788888888664
No 313
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.12 E-value=0.00064 Score=56.97 Aligned_cols=68 Identities=6% Similarity=0.026 Sum_probs=50.0
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC----CChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----FNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~----~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+.+.|+.+.... ..+++++|+|.+.|++++|++++. ...+.|. .+.+.|.+||+..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 40 APEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp HHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 456666777776677777775432 467999999999999999976554 3344553 7889999999864
No 314
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.10 E-value=0.0012 Score=53.56 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=49.8
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+..++..+.+.+.++.+... +..+++++|+|.+.|+++++++ +.....+.|..+.+.|.+|+++
T Consensus 36 ~~~l~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~ 102 (105)
T 1nsw_A 36 APVLEEFAEAHADKVTVAKLNVD--ENPETTSQFGIMSIPTLILFKG-GRPVKQLIGYQPKEQLEAQLAD 102 (105)
T ss_dssp HHHHHHHHHHSTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCCcEEEEEECc--CCHHHHHHcCCccccEEEEEeC-CeEEEEEecCCCHHHHHHHHHH
Confidence 35556677777666777777532 2467999999999999999965 3334457898888899999875
No 315
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.09 E-value=0.00014 Score=60.30 Aligned_cols=66 Identities=8% Similarity=0.070 Sum_probs=46.0
Q ss_pred CcccccCCCcEEEEEec-----CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeeeeE
Q 010886 146 FPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPS 219 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PT 219 (498)
+++.+++++ ++.|++ |||++|+++.+.+++.. +.+..+|.++++.. ..+.+.++ +.++|+
T Consensus 10 ~~~~i~~~~--vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g------~~~vP~ 75 (105)
T 2yan_A 10 LKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSN------WPTYPQ 75 (105)
T ss_dssp HHHHHTSSS--EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHT------CCSSCE
T ss_pred HHHHhccCC--EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHC------CCCCCe
Confidence 445565554 344777 99999999888887653 57888999866432 23556667 889999
Q ss_pred EEEeCCCC
Q 010886 220 LVAFPPGC 227 (498)
Q Consensus 220 l~~f~~g~ 227 (498)
+ |.+|.
T Consensus 76 v--~i~g~ 81 (105)
T 2yan_A 76 L--YVKGE 81 (105)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 8 45663
No 316
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.09 E-value=0.002 Score=51.60 Aligned_cols=89 Identities=19% Similarity=0.253 Sum_probs=58.3
Q ss_pred hhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+++.+.. ++++++.|. +.+ ....+.+..++..+.+ +.++.+... ...+++++|++.+.|++++|+++ ..
T Consensus 9 ~~~~~~~---~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g-~~ 81 (104)
T 2e0q_A 9 FDSFLAS---HEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSD--ENPDIAARYGVMSLPTVIFFKDG-EP 81 (104)
T ss_dssp HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSSCEEEEEETT-EE
T ss_pred HHHHHhc---CCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECC--CCHHHHHhCCccccCEEEEEECC-eE
Confidence 4555532 235555554 322 1123455667766655 777777532 24679999999999999999653 33
Q ss_pred eeeecCCCChhHHHHHHHhc
Q 010886 344 PVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 344 ~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.|..+.+.|.+|+++.
T Consensus 82 ~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 82 VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEESCCCHHHHHHHHHHH
T ss_pred hhhccCCCCHHHHHHHHHHH
Confidence 34678988999999999863
No 317
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.09 E-value=0.001 Score=58.74 Aligned_cols=106 Identities=14% Similarity=0.103 Sum_probs=75.0
Q ss_pred EEEecCCCCcccccCCCcEEEEEec-CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCccccee-
Q 010886 138 FNVVTSEDFPSIFHDSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR- 215 (498)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~- 215 (498)
|.++|.+|......+.-+..+.++. +--..-..+.+.+.++|+.++|.+.++.||.++. ....+.+.+| ++
T Consensus 16 V~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~-~~~~~l~~fG------l~~ 88 (147)
T 3bj5_A 16 VIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHT-DNQRILEFFG------LKK 88 (147)
T ss_dssp EEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCG-GGHHHHHHTT------CCG
T ss_pred eEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchH-hHHHHHHHcC------CCc
Confidence 7889999987777665555444343 3333344578999999999999999999998422 2234778888 65
Q ss_pred -eeeEEEEeCC-CCcCCCCccccc-CCCCHHHHHHHHHHHh
Q 010886 216 -GLPSLVAFPP-GCKSSDCMTRFE-GELSVDAVTDWFATAI 253 (498)
Q Consensus 216 -~~PTl~~f~~-g~~~~~~~~~Y~-G~r~~~~Iv~fv~k~~ 253 (498)
..|++.++.. +... ...+. |..+.+.|.+|+.+.+
T Consensus 89 ~~~P~v~i~~~~~~~~---Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 89 EECPAVRLITLEEEMT---KYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp GGCSEEEEEECSSSCE---EECCSCCCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEecccccc---cCCCCcccCCHHHHHHHHHHHH
Confidence 4999999864 2211 01333 7889999999999874
No 318
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.08 E-value=0.002 Score=53.66 Aligned_cols=93 Identities=19% Similarity=0.139 Sum_probs=60.8
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.++. ++++++.|. +.| ....+.+..++.++.+ +.|+.+... +..+++++|+|.+.|+++++
T Consensus 17 ~~~~~~~~~~~~~---~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 17 LTNLTEFRNLIKQ---NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD--ESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSBSEEEEE
T ss_pred cCCHHHHHHHHhC---CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHCCCCcccEEEEE
Confidence 5555556666653 235555544 322 2234666667777654 677776532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHh
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
+++ .....+.|.. .+.|.++|++
T Consensus 91 ~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred eCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 754 3334568877 8889999875
No 319
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.08 E-value=0.0011 Score=64.15 Aligned_cols=98 Identities=13% Similarity=0.023 Sum_probs=66.5
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHhC-------CC------------Cc
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (498)
.+++++|.|| +.||+.|..-.|.+.++++++++. +.|..|+++........++++ ++ .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 3578889998 999999999999999999999865 688888888543333333332 11 22
Q ss_pred cccee------eeeEEEEeCCCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 211 ~~~I~------~~PTl~~f~~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
.|+|. .+|+.+++-..... ...+.| .++.+++++.+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I---~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGIL---RQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHhh
Confidence 45565 57998888644332 112223 56788888887653
No 320
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.07 E-value=0.00027 Score=56.59 Aligned_cols=72 Identities=6% Similarity=0.002 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEccc--chh----hhHHHHhCCCCcccceeeeeEEEEeCCCCcCC
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRL----ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~--~~~----~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~ 230 (498)
++.|++|||++|+++.+.+++.. +.+-.+|.+. ... ..++.+.++ +.++|++.+ +|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g------~~~vP~l~~--~g---- 75 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISG------SYSVPVVVK--GD---- 75 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHS------SSCSCEEEE--TT----
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcC------CCCcCEEEE--CC----
Confidence 56788999999999887776652 3344566652 111 145667777 889999976 55
Q ss_pred CCcccccCCCCHHHHHHHHH
Q 010886 231 DCMTRFEGELSVDAVTDWFA 250 (498)
Q Consensus 231 ~~~~~Y~G~r~~~~Iv~fv~ 250 (498)
..-|+.+.+.|.+++.
T Consensus 76 ----~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 76 ----KHVLGYNEEKLKELIR 91 (92)
T ss_dssp ----EEEESCCHHHHHHHHH
T ss_pred ----EEEeCCCHHHHHHHhc
Confidence 2345568899888864
No 321
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.05 E-value=0.0022 Score=57.56 Aligned_cols=97 Identities=9% Similarity=-0.068 Sum_probs=66.4
Q ss_pred CCcEEEEEecCCCC-CCCCChHHHHHHHHHhhc---cceEEEEEccc-c---------------------------hhhh
Q 010886 153 SKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEG---IANTGMVELGD-I---------------------------RLAT 200 (498)
Q Consensus 153 ~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~---~i~va~Vdc~~-~---------------------------~~~~ 200 (498)
+++++|.|++.||+ .|....|.+.++.++++. .+.+..|.++. + ....
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 599999999999999853 36777777651 0 1123
Q ss_pred HHHHhCCCCc---ccceeeeeEEEEeCCCCcCCCCcccccCC-CCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQ---IFFRRGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~---~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~-r~~~~Iv~fv~k~ 252 (498)
.+++.+|+.- .+.+.+.|++.++-+.+.. ...|.|. .+.++|.+.+.+.
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i---~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI---KDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBE---EEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeE---EEEEeCCCCCHHHHHHHHHHh
Confidence 4555555321 1335667888777544332 2345664 6789999998887
No 322
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.04 E-value=0.0035 Score=50.38 Aligned_cols=96 Identities=19% Similarity=0.292 Sum_probs=59.3
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.++.. .+++.++ |+++.+ ....+.+..++..+. .+.|+.+... +..+++++|+|.+.|+++++
T Consensus 4 i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 4 LATAADLEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVD--QNEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp CCSHHHHHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEecc--CCHHHHHHcCCccccEEEEE
Confidence 34433355555532 2345555 544432 112345555666654 5677777532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++ .....+.| .+.+.|.+||++.
T Consensus 80 ~~g-~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 80 KDG-KEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHhh
Confidence 853 33345678 5888999999763
No 323
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.04 E-value=0.00095 Score=57.80 Aligned_cols=68 Identities=15% Similarity=0.203 Sum_probs=52.7
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|+++ .....+.|..+.+.|.+||+..
T Consensus 43 ~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 43 EPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFCHG-RPVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEETT-EEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEeCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 456667787787778888876432 4789999999999999999753 3445678998999999999864
No 324
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.03 E-value=0.00055 Score=62.55 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=34.5
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc 193 (498)
+.++.+++|+.+||++|..+.|.+.++.+.+.+.+.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 456789999999999999999999999888766666655554
No 325
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.03 E-value=0.0035 Score=51.05 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=59.5
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.+... .++++++ |+++.+ ....+.+..++..+ +.+.|+.+.... ..+++++|+|.+.||+++|
T Consensus 6 i~~~~~~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 6 VGSDPDFQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQFF 81 (107)
T ss_dssp ECSGGGHHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred ecCHHHHHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEEEE
Confidence 44444466666432 2334444 444422 12345566677766 457777775432 4679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++ .....+.|. +..+|.+||++.
T Consensus 82 ~~G-~~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 82 RNK-VRIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 764 333456775 456699998763
No 326
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.03 E-value=0.0014 Score=54.47 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=50.9
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+.+.|+.+... +...++++|+|.+.|++++|++ +.....+.|..+.+.|.+||++.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 49 APVLEEIATERATDLTVAKLDVD--TNPETARNFQVVSIPTLILFKD-GQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHTCSC
T ss_pred HHHHHHHHHHhcCCeEEEEEECC--CCHHHHHhcCCCcCCEEEEEEC-CEEEEEecCCCCHHHHHHHHHHH
Confidence 45566677777666777777532 2477999999999999999984 33344578998889999998763
No 327
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.02 E-value=0.0022 Score=52.04 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=49.9
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+..++..+.+.+.++.+... +..+++++|+|.+.|+++++++ +.....+.|..+.+.|.++|++
T Consensus 38 ~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~ 104 (107)
T 1dby_A 38 APVVDEIAGEYKDKLKCVKLNTD--ESPNVASEYGIRSIPTIMVFKG-GKKCETIIGAVPKATIVQTVEK 104 (107)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHHTCCSSCEEEEESS-SSEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEECC--CCHHHHHHCCCCcCCEEEEEeC-CEEEEEEeCCCCHHHHHHHHHH
Confidence 35556677777666777777532 2467999999999999999964 3334457898888999999876
No 328
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.01 E-value=0.0023 Score=52.36 Aligned_cols=98 Identities=19% Similarity=0.192 Sum_probs=61.5
Q ss_pred cccchhhhhhhhhcC-CCcE-EEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKTG-PHKV-KVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~~-~~~~-~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+.... .+++ +|.|+++.| ....+.+..++..+.+.+.|+.+... +...++++|+|.+.|++++
T Consensus 7 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~ 84 (112)
T 1ep7_A 7 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVAEAAGITAMPTFHV 84 (112)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TTHHHHHHHTCCBSSEEEE
T ss_pred ecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC--chHHHHHHcCCCcccEEEE
Confidence 434334555554311 1234 444554422 11235566677777656777777532 2467999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++++ .....+.|. +.+.|.+||++.
T Consensus 85 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 85 YKDG-VKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp EETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred EECC-eEEEEEcCC-CHHHHHHHHHHH
Confidence 9754 333456787 888999999864
No 329
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.01 E-value=0.0017 Score=53.28 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=50.7
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+.+.+..+... +..+++++|+|.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 42 ~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 42 APSLEAIAAEYGDKIEIVKLNID--ENPGTAAKYGVMSIPTLNVYQGG-EVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHTHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEcC--CCHHHHHhCCCCcccEEEEEeCC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 35566677777666777777532 24779999999999999999754 3334578988889999998763
No 330
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.00 E-value=0.0012 Score=56.49 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=57.5
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~ 353 (498)
++++++.|. +.| ....+.+..++..+.+.+.|+.+...+ ..+++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 40 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 116 (128)
T 2o8v_B 40 DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 116 (128)
T ss_dssp SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEeC-CEEEEEEcCCCCH
Confidence 345555554 322 223566677777776667777775432 356889999999999999964 3334457898899
Q ss_pred hHHHHHHHhc
Q 010886 354 SRLSEVMEQN 363 (498)
Q Consensus 354 ~~L~~fi~~~ 363 (498)
+.|.+||++.
T Consensus 117 ~~l~~~l~~~ 126 (128)
T 2o8v_B 117 GQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999763
No 331
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.97 E-value=0.00062 Score=60.79 Aligned_cols=44 Identities=16% Similarity=0.106 Sum_probs=37.3
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI 196 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~ 196 (498)
.+++++|.|| +.||++|..-.|.+.++.+++ ..+.|..|+++..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~ 86 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLP 86 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCH
Confidence 3568899998 899999999999999999988 5578888888743
No 332
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.95 E-value=0.002 Score=56.03 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=61.9
Q ss_pred hhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
++..+. .++++++ |+++.+ ....+.+..++..+.+.+.|+.+... +...++++|+|.+.|++++|++ +..
T Consensus 48 ~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-G~~ 121 (148)
T 3p2a_A 48 LDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE--AEPALSTRFRIRSIPTIMLYRN-GKM 121 (148)
T ss_dssp HHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEE
T ss_pred HHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc--CCHHHHHHCCCCccCEEEEEEC-CeE
Confidence 455552 2334444 554422 22346667778777777777777532 2478999999999999999975 334
Q ss_pred eeeecCCCChhHHHHHHHhc
Q 010886 344 PVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 344 ~~~y~g~~~~~~L~~fi~~~ 363 (498)
...|.|..+.+.|.+||++.
T Consensus 122 ~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 122 IDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEESSCCCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH
Confidence 44678999999999999864
No 333
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=96.95 E-value=0.0026 Score=53.63 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=52.7
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
.+.+..++..+.+.+.+..+........+++++|+|.+.|++++|.+++.....+.|..+.+.|.++|+...
T Consensus 45 ~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 45 QKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 355566777776667777775211124679999999999999999855554456789889999999998753
No 334
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.93 E-value=0.002 Score=57.03 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=58.1
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
++|.|+++.+ ....+.+..++..+.+.+.|+.++..+ .+.++++|+|.+.||+++|++ +.....+.|..+.+.|
T Consensus 67 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~-G~~~~~~~G~~~~~~l 143 (155)
T 2ppt_A 67 LLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHK-GRELARAAGARPASEL 143 (155)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeC-CeEEEEecCCCCHHHH
Confidence 4455555422 223466677888877678888876432 367999999999999999975 3334457899899999
Q ss_pred HHHHHhc
Q 010886 357 SEVMEQN 363 (498)
Q Consensus 357 ~~fi~~~ 363 (498)
.+||++.
T Consensus 144 ~~~l~~~ 150 (155)
T 2ppt_A 144 VGFVRGK 150 (155)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 335
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.92 E-value=0.00065 Score=60.12 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=58.4
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEE--------------------------------------
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE-------------------------------------- 192 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vd-------------------------------------- 192 (498)
.+.++.+|.|..++|++|+++.+.++++ +.+++.-++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 4578899999999999999999887654 222222111
Q ss_pred ----ccc-chhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 193 ----LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 193 ----c~~-~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|.. -.....+++++| |+|.||+++ .+|. .+.|.++.+.|.+++.+.
T Consensus 87 ~~~~~~~~v~~~~~la~~~g------I~gtPt~vi-~nG~-------~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFG------FNGTPTLVF-PNGR-------TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTT------CCSSCEEEC-TTSC-------EEESCCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHhC------CCccCEEEE-ECCE-------EeeCCCCHHHHHHHHHHH
Confidence 111 011234667777 999999987 5663 577999999999998776
No 336
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.91 E-value=0.0038 Score=51.45 Aligned_cols=88 Identities=20% Similarity=0.252 Sum_probs=57.3
Q ss_pred hhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+++.++. ++++++.|. +.| ....+.+..++..+. .+.|..+... +...++++|+|.+.|++++++++ ..
T Consensus 19 f~~~~~~---~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~ 91 (112)
T 1syr_A 19 FDSIISQ---NELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVD--EVSEVTEKENITSMPTFKVYKNG-SS 91 (112)
T ss_dssp HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TTHHHHHHTTCCSSSEEEEEETT-EE
T ss_pred HHHHHcc---CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECC--CCHHHHHHcCCCcccEEEEEECC-cE
Confidence 5666643 335555554 322 112355555666654 4667776532 24679999999999999999854 33
Q ss_pred eeeecCCCChhHHHHHHHhc
Q 010886 344 PVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 344 ~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.|. +.+.|.+||++.
T Consensus 92 ~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 92 VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEESC-CHHHHHHHHHTT
T ss_pred EEEEeCC-CHHHHHHHHHHh
Confidence 3456888 889999999863
No 337
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.91 E-value=0.0032 Score=54.01 Aligned_cols=69 Identities=16% Similarity=0.302 Sum_probs=52.0
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
.+.+..++..+.+.+.|+.+... ...+++++|+|.+.|++++|..++. .+.+.|..+.+.|.+||++..
T Consensus 57 ~~~l~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 57 APILDELAKEYDGQIVIYKVDTE--KEQELAGAFGIRSIPSILFIPMEGK-PEMAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSCEEEEECSSSC-CEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEEeCC--CCHHHHHHcCCCCCCEEEEECCCCc-EEEEeCCCCHHHHHHHHHHHh
Confidence 35566677777666777777532 2367999999999999999943333 346789999999999998754
No 338
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.88 E-value=0.0021 Score=53.99 Aligned_cols=95 Identities=21% Similarity=0.190 Sum_probs=60.0
Q ss_pred cccchhhhhhhhhcCCCcEE-EEEEecCCC-C--CcHHHHHHHHhcccc-ceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVK-VIFFSKTGE-R--ASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~-vl~f~~~~~-~--~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.++ .++++ |.|+++.|. | ..+.+..++..+.+. +.|..+... ...+++++|+|.+.|++++
T Consensus 20 i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d--~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 20 ISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD--EQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT--TCHHHHHHHTCCSSSEEEE
T ss_pred cCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc--CCHHHHHHcCCCcccEEEE
Confidence 555555666663 23344 445544321 1 234455566665543 666666532 2467999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
|+++ .....+.|. +.+.|.+||++.
T Consensus 95 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 95 FKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9753 333456787 889999999863
No 339
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.87 E-value=0.001 Score=59.25 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=44.9
Q ss_pred CCCcEEEEEe-cCCCCCCC-CChHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHHhCC
Q 010886 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~-i~-va~Vdc~~~~~~~~l~~~~~ 207 (498)
.+++++|.|| +.||+.|. .-.|.+.+++++++.. +. |..|+.+........+++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~ 93 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYP 93 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcC
Confidence 4568899999 89999999 8999999999999753 67 88888875444455677776
No 340
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.87 E-value=0.0029 Score=50.96 Aligned_cols=67 Identities=16% Similarity=0.332 Sum_probs=49.6
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+..++..+.+.+.+..+... +..+++++|+|.+.|++++++++ .....+.|..+.+.|.++|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 37 APVIDELAKEYSGKIAVYKLNTD--EAPGIATQYNIRSIPTVLFFKNG-ERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCceEEEEEcCc--chHHHHHhCCCCcccEEEEEeCC-eEEEEEecCCCHHHHHHHHHh
Confidence 35556677777666777776532 24679999999999999999753 333456888888999999975
No 341
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.82 E-value=0.00036 Score=64.42 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=38.5
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~ 194 (498)
.+.++.+|+|+++||+||+++.|.++++++.+.+.+.+..++..
T Consensus 22 ~~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 22 QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp STTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 34688999999999999999999999999888777778888876
No 342
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.81 E-value=0.0038 Score=51.33 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=56.9
Q ss_pred hhhhhhhcCCCcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+++.+.. ++++++.| ++-| ....+.+..++..+. .+.|..+... ....++++|+|.+.|++++|++ +..
T Consensus 17 f~~~~~~---~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-G~~ 89 (109)
T 3f3q_A 17 FDSAIAQ---DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVD--ELGDVAQKNEVSAMPTLLLFKN-GKE 89 (109)
T ss_dssp HHHHTTS---SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEE
T ss_pred HHHHHhc---CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC--CCHHHHHHcCCCccCEEEEEEC-CEE
Confidence 4555542 34555544 4422 123455666776664 4667776532 2477999999999999999984 444
Q ss_pred eeeecCCCChhHHHHHHHhc
Q 010886 344 PVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 344 ~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.|. +.+.|.++|+++
T Consensus 90 ~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 90 VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHhh
Confidence 4456777 678999999863
No 343
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=96.81 E-value=0.00075 Score=65.07 Aligned_cols=88 Identities=10% Similarity=-0.025 Sum_probs=63.0
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchh------------------------hhHHHHhCCCC
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------------ATHLAERKPIG 209 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~------------------------~~~l~~~~~~~ 209 (498)
++|+.|+++||+.|....|.+.+++++++.. +.|..|+++.... ...+++.|+
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~yg-- 113 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLG-- 113 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHT--
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhC--
Confidence 4566788999999999999999999999865 7899999874321 123555555
Q ss_pred ccccee-------eeeEEEEeC-CCCcCCCCcccccC----CCCHHHHHHHHHHH
Q 010886 210 QIFFRR-------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (498)
Q Consensus 210 ~~~~I~-------~~PTl~~f~-~g~~~~~~~~~Y~G----~r~~~~Iv~fv~k~ 252 (498)
|. ++|++.++- +|... ..+.| +|+.++|...+...
T Consensus 114 ----v~~~~~g~~~~p~~fIID~dG~I~----~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 114 ----LLHAESATHTVRGVFIVDARGVIR----TMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp ----CCCTTCSSSCCEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred ----CccccCCCcccceEEEECCCCeEE----EEEecCCcccchhHHHHHHHHHH
Confidence 76 899888885 45431 12222 37889998888664
No 344
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.78 E-value=0.0037 Score=53.82 Aligned_cols=82 Identities=18% Similarity=0.200 Sum_probs=57.3
Q ss_pred cEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 010886 279 KVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (498)
Q Consensus 279 ~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~ 355 (498)
+++|.|+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|+++ .....+.|..+.+.
T Consensus 52 ~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~ 128 (140)
T 1v98_A 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRG-APVATWVGASPRRV 128 (140)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCC-cEEEEEeCCCCHHH
Confidence 35555555432 122455666777776667777776432 4679999999999999999754 33345789888999
Q ss_pred HHHHHHhc
Q 010886 356 LSEVMEQN 363 (498)
Q Consensus 356 L~~fi~~~ 363 (498)
|.+||++.
T Consensus 129 l~~~i~~~ 136 (140)
T 1v98_A 129 LEERLRPY 136 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 345
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.77 E-value=0.0012 Score=58.93 Aligned_cols=97 Identities=10% Similarity=-0.035 Sum_probs=60.5
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCC--------------cccceee
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIG--------------QIFFRRG 216 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~--------------~~~~I~~ 216 (498)
.+++++|.|| +.||++|..-.|.++++.++ ..+.+..|+++........++++++. +.|++..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 3578888888 78999999999999988777 34677788887544444556665541 1455664
Q ss_pred ------eeEEEEeC-CCCcCCC-CcccccCCCCHHHHHHHHH
Q 010886 217 ------LPSLVAFP-PGCKSSD-CMTRFEGELSVDAVTDWFA 250 (498)
Q Consensus 217 ------~PTl~~f~-~g~~~~~-~~~~Y~G~r~~~~Iv~fv~ 250 (498)
.|+..++- +|..... ......+..+.+++++.++
T Consensus 123 ~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 123 EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp TTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred ccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 78877774 4433100 0001123445667766654
No 346
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.77 E-value=0.0058 Score=50.64 Aligned_cols=96 Identities=16% Similarity=0.222 Sum_probs=58.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEe
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk 338 (498)
+++.+.+++.++......++|.|+++.| ....+.+..++..+ .+.|+.+... +..+++++|+|.+.|++++++
T Consensus 18 l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~ 93 (117)
T 2xc2_A 18 LKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD--KLEETARKYNISAMPTFIAIK 93 (117)
T ss_dssp CCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT--TSHHHHHHTTCCSSSEEEEEE
T ss_pred eCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC--ccHHHHHHcCCCccceEEEEe
Confidence 4553445666653222224444555422 11235555566655 5666666532 247799999999999999997
Q ss_pred CCCCceeeecCCCChhHHHHHHHhc
Q 010886 339 DPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 339 ~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ .....+.| .+.+.|.++|++.
T Consensus 94 ~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 94 NG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp TT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred CC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 54 33345678 5788899998763
No 347
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.73 E-value=0.001 Score=59.92 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=44.7
Q ss_pred CCCcEEEEEe-cCCCCCCCC-ChHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHHhCC
Q 010886 152 DSKPWLIQVY-SDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~-l~p~~~~~A~~l~~~-i-~va~Vdc~~~~~~~~l~~~~~ 207 (498)
.+++++|.|| +.||+.|.. -.|.+.+++++++.. + .|..|+.+........+++++
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 4567888887 999999998 899999999998754 7 888999875544555677776
No 348
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.72 E-value=0.0013 Score=58.71 Aligned_cols=99 Identities=8% Similarity=0.106 Sum_probs=65.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEe-cC---CCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+++.+.. ..++++|+-|. +- |....|.+..+|.++.+.+.|+.|++.+ .++++++|+|.+.||+++|
T Consensus 26 l~t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 26 LNSGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CCSHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEEEEEE
T ss_pred cCCHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 4444445544432 13346555454 31 2224577888999887778888887533 4679999999999999999
Q ss_pred eCCCCcee--------eecCCCC-hhHHHHHHHhc
Q 010886 338 KDPGVKPV--------VYYGSFN-NSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~--------~y~g~~~-~~~L~~fi~~~ 363 (498)
+++....+ ...|..+ .+.|.++|+..
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 97643211 3467766 88899999864
No 349
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.72 E-value=0.0053 Score=52.13 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=60.7
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEe
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk 338 (498)
+++.+.+++.++.. ..++|.|+++.| ....+.+..++..+ ..+.|+.+... +..+++++|+|.+.||+++|+
T Consensus 24 l~~~~~f~~~~~~~--k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 24 VYSVEQFRNIMSED--ILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDAD--NNSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp ECCHHHHHHHHHSS--SCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETT--TCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCHHHHHHHHccC--CEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECC--CCHHHHHHcCCCcccEEEEEe
Confidence 55534356666321 224444555422 22456667777776 35777777542 247799999999999999997
Q ss_pred CCCCceeeecCCCChhHHHHHHHhc
Q 010886 339 DPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 339 ~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ .....+.| .+.+.|.+||++.
T Consensus 99 ~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 99 SG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp TT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred CC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 54 33345678 6888899998763
No 350
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.71 E-value=0.0037 Score=52.17 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=48.2
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+.+ +.|..+... +..+++++|+|.+.|++++|+++ .....+.|.. .+.|.+||++.
T Consensus 53 ~~~l~~~~~~~~~-~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 53 APVFADLAKKFPN-AVFLKVDVD--ELKPIAEQFSVEAMPTFLFMKEG-DVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp HHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EEEEEEESSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC-cEEEEEECC--CCHHHHHHcCCCcccEEEEEeCC-EEEEEEeCcC-HHHHHHHHHHH
Confidence 3555667776654 677776532 24779999999999999999754 3334578887 88999999864
No 351
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.71 E-value=0.00065 Score=60.88 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=48.0
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEE
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
+++++|.|| +.||+.|....|.+.++.+++ ..+.+..|+++......+.+++++ +..+|.+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~------~~~~~~l 108 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFN------IQNVTVA 108 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTT------CCSSEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcC------CCCeEEe
Confidence 568899998 899999999999999998888 557888888885544455677777 5456644
No 352
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.68 E-value=0.0019 Score=55.47 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=61.0
Q ss_pred cccchhhhhhhhhcCCCc-EEEEEEec---CCCCCcHHHHHHHHhccc-cceEEEEEecccccHHHHHHcCCC------C
Q 010886 262 YTKESMGKNFLAKTGPHK-VKVIFFSK---TGERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVE------S 330 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~-~~vl~f~~---~~~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~~~~l~~~f~V~------~ 330 (498)
++..+ +++.+... .++ ++|.|+++ .|....|.+..++.++.+ .+.|+.+... +.++++++|+|. +
T Consensus 12 l~~~~-f~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 12 FNDKT-IDEELERD-KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CCTTH-HHHHHHHS-TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--TCHHHHHHTTCCCCSSSSC
T ss_pred ccHhh-HHHHHhcC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--cCHHHHHHccCcccCCcCC
Confidence 44444 55555443 233 45555554 234456788888888764 5666665422 247799999999 9
Q ss_pred CCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 331 APAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 331 ~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.||+++|+++ .....+.|..+.+.|.+|+.+
T Consensus 88 ~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 88 LPTLILFQGG-KEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSEEEEESSS-SEEEEESCBCSSSCBCCCCCC
T ss_pred CCEEEEEECC-EEEEEecCcCchHHHHHHHhc
Confidence 9999999754 333456787777666666654
No 353
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.67 E-value=0.0018 Score=53.16 Aligned_cols=74 Identities=7% Similarity=0.068 Sum_probs=48.4
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc--hhhhHH----HHhCCCCcccceeeeeEEEEeCCCCc
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--RLATHL----AERKPIGQIFFRRGLPSLVAFPPGCK 228 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~--~~~~~l----~~~~~~~~~~~I~~~PTl~~f~~g~~ 228 (498)
.-++.|++|||++|+++.+.+++.. +.+-.+|.+.. ....++ .+..+ +.++|++.+ +|.
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g------~~~vP~l~i--~~~- 86 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNP------SVSFPTTII--NDE- 86 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCT------TCCSCEEEE--TTT-
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCC------CCccCEEEE--CCC-
Confidence 4467799999999999998887652 34556676631 111122 23356 889999876 331
Q ss_pred CCCCcccccCCCCHHHHHHHH
Q 010886 229 SSDCMTRFEGELSVDAVTDWF 249 (498)
Q Consensus 229 ~~~~~~~Y~G~r~~~~Iv~fv 249 (498)
.+-|+.+.+.|.+++
T Consensus 87 ------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 ------KAIVGFKEKEIRESL 101 (103)
T ss_dssp ------EEEESCCHHHHHHHT
T ss_pred ------EEEEcCCHHHHHHHh
Confidence 345777888877664
No 354
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.67 E-value=0.0052 Score=50.58 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=49.3
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.+.+..++..+. .+.|..+... ...+++++|+|.+.|++++|+++ .....+.|..+.+.|.+++...
T Consensus 38 ~~~l~~~~~~~~-~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 38 EKVLDKFGARAP-QVAISSVDSE--ARPELMKELGFERVPTLVFIRDG-KVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp HHHHHHHHTTCT-TSCEEEEEGG--GCHHHHHHTTCCSSCEEEEEESS-SEEEEEESCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC-CcEEEEEcCc--CCHHHHHHcCCcccCEEEEEECC-EEEEEEcCCCCHHHHHHHHHHH
Confidence 355555666553 5677777542 24779999999999999999654 3445678988999999999875
No 355
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.0063 Score=49.84 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=57.8
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEecCCC-C--CcHHHHHHHHhc-cccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGE-R--ASPFVRQISRNY-WAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~~-~--~~~~~~~~A~~~-~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+.....++++++ |+++.|. | ..+.+..++..+ ...+.|+.+... +..+++++|+|.+.|++++
T Consensus 5 i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~ 82 (112)
T 3d6i_A 5 INDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD--ENSEISELFEISAVPYFII 82 (112)
T ss_dssp ECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT--TCHHHHHHTTCCSSSEEEE
T ss_pred cCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc--cCHHHHHHcCCCcccEEEE
Confidence 4443335555543112345554 4444321 1 235556666664 234677776532 2477999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
|+++ .....+.|. ...+|.++|++.
T Consensus 83 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 83 IHKG-TILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EETT-EEEEEECSC-CHHHHHHHHHHH
T ss_pred EECC-EEEEEecCC-CHHHHHHHHHHH
Confidence 9753 333456776 455699998763
No 356
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.66 E-value=0.00055 Score=54.74 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=41.1
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchh-hhHHHHhCCCCcccceeeeeEEEEeCCCC
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~-~~~l~~~~~~~~~~~I~~~PTl~~f~~g~ 227 (498)
++.|++|||++|+++.+.+++. .+.+..+|.++++. ...+.+.++ +.++|++ |.+|.
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~------~~~vP~l--~~~g~ 65 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSG------RNTFPQI--FIGSV 65 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHT------SSCCCEE--EETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhC------CCCcCEE--EECCE
Confidence 6789999999999888777653 25677888886533 234566677 8899986 44663
No 357
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.58 E-value=0.00066 Score=60.39 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=43.6
Q ss_pred CCCcEEEEEec-CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCC
Q 010886 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~ 207 (498)
.+++++|.||+ .||++|....|.++++.+++ ..+.+..|+++........+++++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcC
Confidence 35789999995 99999999999999998888 557888888875444445666666
No 358
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.57 E-value=0.011 Score=51.91 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=60.2
Q ss_pred cccchhhhhhhhhcCCCcE-EEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKV-KVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~-~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.++..+.... +++ +|.|+.+-| ....+.+..++..+ ..+.|+.+... +...++++|+|.+.|++++|
T Consensus 17 l~~~~~~~~~~~~~~-~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 17 VGSAGQFEELLRLKA-KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAE--GVPEVSEKYEISSVPTFLFF 92 (153)
T ss_dssp ECSHHHHHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETT--TSHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhcC-CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECC--CCHHHHHHcCCCCCCEEEEE
Confidence 444444566665421 334 444554422 12345556666665 45777777532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ +.....+.| .+.+.|.+||++.
T Consensus 93 ~~-G~~~~~~~G-~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 93 KN-SQKIDRLDG-AHAPELTKKVQRH 116 (153)
T ss_dssp ET-TEEEEEEES-SCHHHHHHHHHHH
T ss_pred EC-CEEEEEEeC-CCHHHHHHHHHHH
Confidence 84 433334567 4778899999875
No 359
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.57 E-value=0.00037 Score=58.30 Aligned_cols=64 Identities=14% Similarity=0.237 Sum_probs=42.2
Q ss_pred ccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc----hh-hhHHHHhCCCCcccceeeeeEEEE
Q 010886 148 SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----RL-ATHLAERKPIGQIFFRRGLPSLVA 222 (498)
Q Consensus 148 ~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~----~~-~~~l~~~~~~~~~~~I~~~PTl~~ 222 (498)
+.+++++ ++.|++|||++|++..+.+++.. +.+-.+|.+.. +. ...+.+..| +..+|++
T Consensus 14 ~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g------~~tvP~i-- 77 (113)
T 3rhb_A 14 KTVTENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTG------QHTVPNV-- 77 (113)
T ss_dssp HHHHHSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHS------CCSSCEE--
T ss_pred HHHhcCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhC------CCCcCEE--
Confidence 3445555 67799999999999888877542 34566777642 22 122455557 8899998
Q ss_pred eCCCC
Q 010886 223 FPPGC 227 (498)
Q Consensus 223 f~~g~ 227 (498)
|.+|.
T Consensus 78 fi~g~ 82 (113)
T 3rhb_A 78 FVCGK 82 (113)
T ss_dssp EETTE
T ss_pred EECCE
Confidence 55663
No 360
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.55 E-value=0.0012 Score=59.64 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=48.0
Q ss_pred CCCcEEEEEecCCCCCCCCC-hHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHHhCCCCccccee-eeeE
Q 010886 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKPIGQIFFRR-GLPS 219 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~-i~-va~Vdc~~~~~~~~l~~~~~~~~~~~I~-~~PT 219 (498)
.++++|+.|.+.||+.|..- .|.+.++++++++. +. |..|+.+........+++++ +. .||.
T Consensus 43 gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~------~~~~fp~ 108 (171)
T 2pwj_A 43 DKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ------AKDAIEF 108 (171)
T ss_dssp TSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT------CTTTSEE
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC------CCCceEE
Confidence 33578889999999999986 99999999998754 56 88898875544555677777 63 6774
No 361
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.53 E-value=0.0016 Score=60.35 Aligned_cols=61 Identities=8% Similarity=0.053 Sum_probs=45.2
Q ss_pred CCCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeE
Q 010886 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (498)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PT 219 (498)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|.++........+++++ +..||.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~------~~~f~~ 138 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEG------LSNVIT 138 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTT------CTTEEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcC------CCCceE
Confidence 3678899998 789999999999999999998 447888888874433333444444 556663
No 362
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.53 E-value=0.004 Score=52.29 Aligned_cols=94 Identities=11% Similarity=0.063 Sum_probs=60.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecC-C---CCCcHHHHHHHHhccccceEEEEEecccc--cHHHHHHcCCCC-CCEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKT-G---ERASPFVRQISRNYWAYASFAFVLWREEE--SSIWWNTFEVES-APAI 334 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~-~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~--~~~l~~~f~V~~-~Pti 334 (498)
+++.+.++++++. +++++++|... | ....+.+...+.. +.+.|..+...... +.+++.+|||++ -|++
T Consensus 11 i~s~e~f~~ii~~---~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 11 LSSIDQFEQVIEE---NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred cCCHHHHHHHHhc---CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 4555557777764 34777777542 2 1122344445543 57889999764331 245899999995 8999
Q ss_pred EEEeCCCCceeeecCCCChhHHHHHH
Q 010886 335 VFLKDPGVKPVVYYGSFNNSRLSEVM 360 (498)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~L~~fi 360 (498)
++|+++...--.-.+.++.+.|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 99998654333347788888887654
No 363
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.50 E-value=0.00041 Score=63.75 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=36.9
Q ss_pred CCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEccc
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGD 195 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~~ 195 (498)
.++.+|+|+++||+||+++.|.+ +++++.+.+.+++..++..-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 36889999999999999999987 67887777778888888773
No 364
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.44 E-value=0.0033 Score=52.31 Aligned_cols=79 Identities=20% Similarity=0.209 Sum_probs=54.7
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccc-----cceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc-eeeecCC
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWA-----YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK-PVVYYGS 350 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~-----~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~-~~~y~g~ 350 (498)
++|.|+++.| ....+.+..++..+.+ .+.|+.+..... .+++ +|.++||+++|++++.. ...|.|.
T Consensus 28 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~ 102 (121)
T 2djj_A 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGAKGQPVTYSGS 102 (121)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSCTTSCCCCCCC
T ss_pred EEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcCCCCceEecCC
Confidence 4555555432 1234666677777765 677777764332 2444 99999999999876542 5678999
Q ss_pred CChhHHHHHHHhc
Q 010886 351 FNNSRLSEVMEQN 363 (498)
Q Consensus 351 ~~~~~L~~fi~~~ 363 (498)
.+.+.|.+||+++
T Consensus 103 ~~~~~l~~~i~~~ 115 (121)
T 2djj_A 103 RTVEDLIKFIAEN 115 (121)
T ss_dssp SCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999875
No 365
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.43 E-value=0.0019 Score=53.76 Aligned_cols=68 Identities=7% Similarity=0.035 Sum_probs=46.4
Q ss_pred CCCcccccCCCcEEEEEec-----CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeee
Q 010886 144 EDFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGL 217 (498)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~ 217 (498)
+.+++.+++++ ++.|+. |||++|++..+.+++. .+.+..+|.++++.. ..|.+..| ..++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g------~~~v 71 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSN------WPTY 71 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHS------CCSS
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhC------CCCC
Confidence 44566676665 455777 9999999888777543 267889999866432 23555556 7799
Q ss_pred eEEEEeCCCC
Q 010886 218 PSLVAFPPGC 227 (498)
Q Consensus 218 PTl~~f~~g~ 227 (498)
|+| |.+|.
T Consensus 72 P~i--fi~g~ 79 (109)
T 1wik_A 72 PQL--YVRGD 79 (109)
T ss_dssp CEE--ECSSS
T ss_pred CEE--EECCE
Confidence 985 66774
No 366
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.42 E-value=0.0093 Score=50.34 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=58.7
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+... ..++++++.|. +.| ....+.+..++..+. .+.|..+... +..+++++|+|.+.|++++
T Consensus 21 l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~ 97 (124)
T 1xfl_A 21 CHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD--ELKSVASDWAIQAMPTFMF 97 (124)
T ss_dssp ESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TSHHHHHHTTCCSSSEEEE
T ss_pred eCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc--cCHHHHHHcCCCccCEEEE
Confidence 44434455555431 12345555554 322 112355566666664 4566665432 2477999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++++. ....+.| .+.+.|.++|++.
T Consensus 98 ~~~G~-~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 98 LKEGK-ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EECCE-EEEEEeC-CCHHHHHHHHHHh
Confidence 97543 3334577 4888999998763
No 367
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.41 E-value=0.014 Score=49.75 Aligned_cols=64 Identities=13% Similarity=0.182 Sum_probs=45.4
Q ss_pred HHHHhccccceEEEEEeccc--ccHHHHHHcCCCCCCEEEEEeCCCCce--eeecCCCChhHHHHHHHh
Q 010886 298 QISRNYWAYASFAFVLWREE--ESSIWWNTFEVESAPAIVFLKDPGVKP--VVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 298 ~~A~~~~~~~~f~~v~~~~~--~~~~l~~~f~V~~~Pti~lfk~~~~~~--~~y~g~~~~~~L~~fi~~ 362 (498)
.++..+. .+.+..+...+. ....++++|+|.+.|+++++..++... ..+.|..+.+.|.++++.
T Consensus 58 ~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 58 QVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 3455554 367777765321 236799999999999999994333322 467899999999999986
No 368
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.38 E-value=0.02 Score=46.76 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=58.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEe
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk 338 (498)
++..+ +++.+.......++|.|+++.| ....+.+..++..+. .+.|..+...+ ....++++|+|.+.||+++++
T Consensus 10 l~~~~-~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~~ 86 (111)
T 2pu9_C 10 VNKDT-FWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKILK 86 (111)
T ss_dssp ECTTT-HHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEES
T ss_pred echHH-HHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCc-chHHHHHHcCCCeeeEEEEEe
Confidence 45444 4555543222224444555422 112355566776665 46777775432 247799999999999998887
Q ss_pred CCCCceeeecCCCChhHHHHHHHh
Q 010886 339 DPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 339 ~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
++. ....+.|. +.+.|.++|++
T Consensus 87 ~G~-~~~~~~G~-~~~~l~~~l~~ 108 (111)
T 2pu9_C 87 ENS-VVGEVTGA-KYDKLLEAIQA 108 (111)
T ss_dssp SSS-EEEEEESS-CHHHHHHHHHH
T ss_pred CCc-EEEEEcCC-CHHHHHHHHHH
Confidence 543 33346776 47889999875
No 369
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.32 E-value=0.006 Score=49.33 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=49.5
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhC--CCCcccceeeeeEEEEeCCCCcCCCCcc
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK--PIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~--~~~~~~~I~~~PTl~~f~~g~~~~~~~~ 234 (498)
++.|.+|||++|++.....++ ..+.+-.+|.++++...+...+. | .+.+|+|. +.+|..
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G------~~tVP~I~-i~Dg~~------ 66 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGG------NRTVPTVK-FADGST------ 66 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSS------SSCSCEEE-ETTSCE------
T ss_pred EEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCC------CCEeCEEE-EeCCEE------
Confidence 677889999999876654433 12577889998765533333332 4 77999975 455532
Q ss_pred cccCCCCHHHHHHHHHHH
Q 010886 235 RFEGELSVDAVTDWFATA 252 (498)
Q Consensus 235 ~Y~G~r~~~~Iv~fv~k~ 252 (498)
. ++.+.++|.+++.+.
T Consensus 67 -l-~~~~~~el~~~L~el 82 (92)
T 2lqo_A 67 -L-TNPSADEVKAKLVKI 82 (92)
T ss_dssp -E-ESCCHHHHHHHHHHH
T ss_pred -E-eCCCHHHHHHHHHHh
Confidence 2 334678888888765
No 370
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.32 E-value=0.0021 Score=52.62 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=42.9
Q ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhC-CCCcccceeeeeEEEEeCCCC
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERK-PIGQIFFRRGLPSLVAFPPGC 227 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~-~~~~~~~I~~~PTl~~f~~g~ 227 (498)
...-++.|.+|||++|++..+.+++.. +.+..+|.++++.. ..+.+.. + +.++|++ |.+|.
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g------~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANG------KRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTT------CCCSCEE--EETTE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCC------CCCCCEE--EECCE
Confidence 344567899999999999988887652 56777888865432 2344444 6 7899988 45663
No 371
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.31 E-value=0.0036 Score=53.08 Aligned_cols=85 Identities=19% Similarity=0.261 Sum_probs=55.0
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhcc--ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCC-ceeeec-C
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYW--AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV-KPVVYY-G 349 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~-~~~~y~-g 349 (498)
++++++.|. +.| ....+.+..++..+. ..+.|+.+... ....++++|+|.+.||+++|+++.. .++.|. |
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT--ANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT--TSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC--cCHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 445555554 322 112355666777765 34555555322 2245778899999999999987654 345677 5
Q ss_pred CCChhHHHHHHHhcc
Q 010886 350 SFNNSRLSEVMEQNK 364 (498)
Q Consensus 350 ~~~~~~L~~fi~~~~ 364 (498)
..+.+.|.+||+...
T Consensus 103 ~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHA 117 (133)
T ss_dssp CCSTTHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHhc
Confidence 588899999998753
No 372
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.29 E-value=0.0063 Score=57.03 Aligned_cols=81 Identities=16% Similarity=0.313 Sum_probs=58.3
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
++|.|+++-| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|++ +.....+.|..+.+.|
T Consensus 33 vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l 109 (222)
T 3dxb_A 33 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQL 109 (222)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEEEET-TEEEEEEESCCCHHHH
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEEEEC-CeEEEEeccccChHHH
Confidence 4444555422 223466677888887777777776432 357899999999999999985 3344467899999999
Q ss_pred HHHHHhc
Q 010886 357 SEVMEQN 363 (498)
Q Consensus 357 ~~fi~~~ 363 (498)
.+||+..
T Consensus 110 ~~~l~~~ 116 (222)
T 3dxb_A 110 KEFLDAN 116 (222)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999875
No 373
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.26 E-value=0.0023 Score=58.59 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=41.8
Q ss_pred CCc-EEEEEecCCCCCCCC-ChHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHHhCC
Q 010886 153 SKP-WLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 153 ~~~-~lV~FYapwC~~C~~-l~p~~~~~A~~l~~~-i~-va~Vdc~~~~~~~~l~~~~~ 207 (498)
++. +|+.|.+.||+.|.. -.|.+.++++++++. +. |..|+.++.......+++++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 444 445555999999999 599999999999765 56 99999886544555667766
No 374
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.24 E-value=0.01 Score=48.39 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=58.3
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+... ..++++++.|. +.+ ....+.+..++..+. .+.|..+... +...++++|+|.+.|++++
T Consensus 9 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 85 (113)
T 1ti3_A 9 CHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD--ELKAVAEEWNVEAMPTFIF 85 (113)
T ss_dssp ECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TCHHHHHHHHCSSTTEEEE
T ss_pred eccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc--ccHHHHHhCCCCcccEEEE
Confidence 44434455555532 23456665554 322 112344555666654 4566666432 2477999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++++. ....+.| .+.+.|.++|++.
T Consensus 86 ~~~G~-~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 86 LKDGK-LVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EETTE-EEEEEEC-CCTTHHHHHHHHH
T ss_pred EeCCE-EEEEEec-CCHHHHHHHHHHh
Confidence 97533 3334567 5788899998763
No 375
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.21 E-value=0.013 Score=48.57 Aligned_cols=79 Identities=13% Similarity=0.154 Sum_probs=49.9
Q ss_pred EEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEeccc---c-cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCC
Q 010886 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREE---E-SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (498)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~---~-~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~ 352 (498)
++|.|+++.| ....|.+..++..+.. .+..+..... + ...++++|+|.+.||+++|+++. ....+.|..+
T Consensus 32 ~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~-~~~~~~G~~~ 108 (118)
T 1zma_A 32 ATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQ-INVRCDSSMS 108 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTE-EEEECCTTCC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCE-EEEEecCCCC
Confidence 4444554432 1234555666665543 3444432221 1 25688999999999999998543 3456789889
Q ss_pred hhHHHHHHH
Q 010886 353 NSRLSEVME 361 (498)
Q Consensus 353 ~~~L~~fi~ 361 (498)
.+.|.+||+
T Consensus 109 ~~~l~~~l~ 117 (118)
T 1zma_A 109 AQEIKDFAG 117 (118)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999985
No 376
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.20 E-value=0.0088 Score=52.47 Aligned_cols=93 Identities=15% Similarity=0.211 Sum_probs=60.2
Q ss_pred hhhhhhhcCCCcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+++.+... .++++++.| ++-| ....|.+..++.++.+.+.|+.++.. +..+++++|+|.+.||+++++++...
T Consensus 14 ~~~~i~~~-~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 14 VDQAIKST-AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD--QTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp HHHHHHHC-CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT--TCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC--cCHHHHHHcCCCccCeEEEEECCeEE
Confidence 45544321 234555544 4322 22346667788777766777777642 24679999999999999999875432
Q ss_pred e--------eeecC-CCChhHHHHHHHhc
Q 010886 344 P--------VVYYG-SFNNSRLSEVMEQN 363 (498)
Q Consensus 344 ~--------~~y~g-~~~~~~L~~fi~~~ 363 (498)
. ..+.| ..+.+.|.++|+..
T Consensus 91 ~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 91 KVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 1 24577 67888899998763
No 377
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.19 E-value=0.026 Score=47.02 Aligned_cols=96 Identities=14% Similarity=0.153 Sum_probs=58.4
Q ss_pred cccchhhhhhhhhcCCCcEE-EEEEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVK-VIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~-vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++++ +++.+... .++++ |.|+++.| ....+.+..++.++. .+.|..+...+ +..+++++|+|.+.||++++
T Consensus 23 l~~~~-~~~~~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 23 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp ECTTT-HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEE
T ss_pred ecchh-HHHHHHhc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 44444 44444432 23344 44554422 112455566766664 46677765432 24779999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+++. ....+.|.. .+.|.++|++.
T Consensus 99 ~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 99 KENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 7643 333457764 78899998763
No 378
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.18 E-value=0.0014 Score=60.09 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=35.2
Q ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcc
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~ 194 (498)
+++.+|+|++.||+||+++.|.++++.+.+ .+.+..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 678999999999999999999999999988 3667777765
No 379
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.18 E-value=0.0064 Score=57.86 Aligned_cols=96 Identities=5% Similarity=-0.109 Sum_probs=63.7
Q ss_pred CcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHH------hC--CC------------Ccc
Q 010886 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE------RK--PI------------GQI 211 (498)
Q Consensus 154 ~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~------~~--~~------------~~~ 211 (498)
+.+++.|| ++||+.|..-.|.+.+++++++.. +.|..|.++........++ ++ ++ .+.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 37778888 999999999999999999998764 7888888874332222333 22 11 124
Q ss_pred ccee------------eeeEEEEeCCCCcCCCCccccc----CCCCHHHHHHHHHHH
Q 010886 212 FFRR------------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~------------~~PTl~~f~~g~~~~~~~~~Y~----G~r~~~~Iv~fv~k~ 252 (498)
|++. ..|++.++-+.... ...+. .+|+.++|++.+...
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I---~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKKL---KLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 4464 57998888654332 11222 257889999988764
No 380
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.16 E-value=0.012 Score=45.34 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 291 RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 291 ~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.+..++.++.+.+.+..++..+ ..+++++||+.+.|++++ + +. . .+.|..+.+.|.++|++.
T Consensus 19 ~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~-G~-~-~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 19 AAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMAVPTIVI--N-GD-V-EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp THHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCCSSEEEE--T-TE-E-ECCSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcccCEEEE--C-CE-E-eeecCCCHHHHHHHHHHh
Confidence 34567777777776677777776432 346889999999999988 3 22 2 678888889999999763
No 381
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.16 E-value=0.0038 Score=56.55 Aligned_cols=61 Identities=8% Similarity=0.018 Sum_probs=44.2
Q ss_pred CCcEEEEEe-cCCCCCCC-CChHHHHHHHHHhhcc-ceE-EEEEcccchhhhHHHHhCCCCccccee-eeeE
Q 010886 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-ANT-GMVELGDIRLATHLAERKPIGQIFFRR-GLPS 219 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~-i~v-a~Vdc~~~~~~~~l~~~~~~~~~~~I~-~~PT 219 (498)
++.+++.|| +.||+.|. .-.|.+.+++++++.. +.+ |.|.++........+++.+ +. .||.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~------~~~~fp~ 108 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHK------AEGKVRL 108 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTT------CTTTCEE
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhC------CCCceEE
Confidence 455555555 99999999 5889999999999765 444 4588875545556777777 54 4773
No 382
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.15 E-value=0.0027 Score=49.88 Aligned_cols=80 Identities=9% Similarity=-0.039 Sum_probs=47.2
Q ss_pred EEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccch-hhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcc
Q 010886 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (498)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~-~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~ 234 (498)
-++.|++|||++|++..+.+++.. -...+..||..++. ...++.+..|.. .|.+.++|++.+ +|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~-~~~~~~vP~i~i--~g~------- 70 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKV-IFPISTVPQIFI--DDE------- 70 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCC-SSCCCSSCEEEE--TTE-------
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCC-CCCCCccCEEEE--CCE-------
Confidence 467788999999998876665432 12344445544331 123477777720 011389999854 663
Q ss_pred cccCCCCHHHHHHHHHHH
Q 010886 235 RFEGELSVDAVTDWFATA 252 (498)
Q Consensus 235 ~Y~G~r~~~~Iv~fv~k~ 252 (498)
+-| ..++|.++..+.
T Consensus 71 -~i~--g~~~i~~~~~~~ 85 (89)
T 3msz_A 71 -HIG--GFTELKANADKI 85 (89)
T ss_dssp -EEE--SHHHHHHTHHHH
T ss_pred -EEe--ChHHHHHHHHHH
Confidence 223 456777777654
No 383
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.12 E-value=0.018 Score=49.21 Aligned_cols=89 Identities=22% Similarity=0.258 Sum_probs=60.3
Q ss_pred hhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccccceEEEEEecc-------cccHHHHHHcCCCCCCEEEEE
Q 010886 268 GKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWRE-------EESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~-------~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.+ .++|.|+++-| ....|.+..++..+. +.|+.+...+ ....+++++|+|.+.||+++|
T Consensus 26 ~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~ 99 (135)
T 3emx_A 26 FRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFY 99 (135)
T ss_dssp HHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEE
T ss_pred HHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEE
Confidence 4555543 35666666532 122456666776664 7777776522 124679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhc
Q 010886 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++ +.....+.|..+.+.+.++++..
T Consensus 100 ~~-G~~v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 100 KE-GRIVDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred cC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 95 43445678999999999999874
No 384
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.07 E-value=0.021 Score=48.75 Aligned_cols=96 Identities=10% Similarity=0.143 Sum_probs=56.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEE
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lf 337 (498)
+++.+.++..++.. .++++++.| ++-| ....+.+..++..+ .+.|+.+... ...+++++|+|.+.|++++|
T Consensus 25 l~~~~~~~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 25 LKNTGSLNQVFSST-QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD--IHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp CCCTTHHHHHHTC--CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecChhHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc--chHHHHHhcCCCCCCEEEEE
Confidence 44444456666533 234555544 4322 12345555555544 3455555422 24779999999999999999
Q ss_pred e--CCCC-ceeeecCCCChhHHHHHHHhc
Q 010886 338 K--DPGV-KPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 338 k--~~~~-~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+ ++.. ....+.|. +.+.|.++|++.
T Consensus 100 ~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 100 FNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 7 4331 23345776 788999999864
No 385
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.06 E-value=0.016 Score=52.86 Aligned_cols=96 Identities=19% Similarity=0.187 Sum_probs=64.5
Q ss_pred cCCCcEEEEEecCCCCCCCCChHH-H--HHHHHHhhccceEEEEEcccchh------------hhHHHHh---CCCCccc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGA-W--KTIAALLEGIANTGMVELGDIRL------------ATHLAER---KPIGQIF 212 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~-~--~~~A~~l~~~i~va~Vdc~~~~~------------~~~l~~~---~~~~~~~ 212 (498)
+..+..+|.+++|||..|..+.-. | +++.+.++....+-..|.+.... -..++.. ++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~----- 127 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQK----- 127 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSC-----
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcC-----
Confidence 578999999999999998776522 2 33556666666677888774431 0123433 66
Q ss_pred ceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 213 ~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
+.+||++.++........-.....|..+++++++-+.+.
T Consensus 128 -~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 128 -TDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -STTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 899999999864321101123567999999999888665
No 386
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.01 Score=50.02 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=43.0
Q ss_pred ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhccc
Q 010886 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKL 365 (498)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~~ 365 (498)
..+.+..+.........++++|+|.+.|+++++..++.....+.|..+.+.|.+||+...-
T Consensus 61 ~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 61 RHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp HHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred cCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 3444555543211246799999999999999995444444467898899999999987543
No 387
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.00 E-value=0.013 Score=45.19 Aligned_cols=66 Identities=12% Similarity=0.085 Sum_probs=49.2
Q ss_pred CCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 291 RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 291 ~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.+..++.++.+.+.+..++..+ ..+++++|||.+.|++++ ++. . .+.|..+.+.|.++|++.
T Consensus 18 ~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~G~--~-~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 18 MAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI--NGV--V-RFVGAPSREELFEAINDE 83 (85)
T ss_dssp THHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE--TTT--E-EEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE--CCE--E-EEccCCCHHHHHHHHHHH
Confidence 34567777777777677788776432 356889999999999988 332 2 678888889999999864
No 388
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.99 E-value=0.0011 Score=53.32 Aligned_cols=68 Identities=16% Similarity=0.280 Sum_probs=47.3
Q ss_pred CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+.+..++..+.+.+.++.+... +...++++|++.+.|++++|++ +.....+.|..+.+.|.+|+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 37 IAPIIEELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRSIPTLLLFKN-GQVVDRLVGAQPKEALKERIDK 104 (106)
Confidence 345566666666555566665432 2367899999999999999964 3333456788888889888875
No 389
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=95.96 E-value=0.024 Score=46.46 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=58.7
Q ss_pred cccchhhhhhhhhc-CCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKT-GPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+... ..++++++ |+++.| ....+.+..++..+. .+.|..+... ....++++|+|.+.|++++
T Consensus 11 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 87 (118)
T 2vm1_A 11 CHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD--ELKDVAEAYNVEAMPTFLF 87 (118)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TSHHHHHHTTCCSBSEEEE
T ss_pred ecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc--cCHHHHHHcCCCcCcEEEE
Confidence 44444455555431 11234444 444422 112355566666664 5667776532 2477999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++++. ....+.| .+.+.|.++|++.
T Consensus 88 ~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 88 IKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 97543 3334577 5788899998864
No 390
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.82 E-value=0.019 Score=48.22 Aligned_cols=68 Identities=13% Similarity=0.173 Sum_probs=46.0
Q ss_pred cHHHHHHHHhccccceEEEEEecc-----cccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWRE-----EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~-----~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.|.+..++.++.+.+.|..+...+ .....++++|+|.+.||+++|++ ......+.| .+.+.|.+||++
T Consensus 50 ~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~-~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 50 EPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT-PQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTS-SCEEEGGGG-GCHHHHHHHHHC
T ss_pred hHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcC-CceEecccc-CCHHHHHHHHhc
Confidence 355666777776677788876531 12356899999999999999976 222222233 467789998864
No 391
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.70 E-value=0.0094 Score=51.84 Aligned_cols=83 Identities=13% Similarity=0.164 Sum_probs=53.2
Q ss_pred CcEEEEEE-ecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCcee--------
Q 010886 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPV-------- 345 (498)
Q Consensus 278 ~~~~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~-------- 345 (498)
++++++.| ++-| ....|.+..++.++.+.+.|+.++..+ ..+++++|+|.+.||+++|+++.....
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCSSCEEEEEETTEEEEEECC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcc
Confidence 34555544 4322 223466677777776677777776432 356899999999999999986543322
Q ss_pred eecCCCC-hhHHHHHHHh
Q 010886 346 VYYGSFN-NSRLSEVMEQ 362 (498)
Q Consensus 346 ~y~g~~~-~~~L~~fi~~ 362 (498)
...|..+ .+.|.++|+.
T Consensus 101 ~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 101 KINWAMEDKQEMVDIIET 118 (142)
T ss_dssp -CCSCCSCHHHHHHHHHH
T ss_pred eeeeecCcHHHHHHHHHH
Confidence 1244443 6778888875
No 392
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.68 E-value=0.016 Score=49.12 Aligned_cols=69 Identities=9% Similarity=0.088 Sum_probs=47.2
Q ss_pred HHHH--HHHHhccccceEEEEEecc-cccHHHHHHcCC---CCCCEEEEEeCCCCceeeecC-------CCChhHHHHHH
Q 010886 294 PFVR--QISRNYWAYASFAFVLWRE-EESSIWWNTFEV---ESAPAIVFLKDPGVKPVVYYG-------SFNNSRLSEVM 360 (498)
Q Consensus 294 ~~~~--~~A~~~~~~~~f~~v~~~~-~~~~~l~~~f~V---~~~Pti~lfk~~~~~~~~y~g-------~~~~~~L~~fi 360 (498)
+.+. .++..+.+.+.+..+...+ ....+++++|+| .+.|++++|...+.....+.| .++.+.|.+|+
T Consensus 49 ~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l 128 (133)
T 3fk8_A 49 KSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFF 128 (133)
T ss_dssp HHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHH
T ss_pred HHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHH
Confidence 4455 5555565567777776522 224789999999 999999999444443334455 46788899998
Q ss_pred Hh
Q 010886 361 EQ 362 (498)
Q Consensus 361 ~~ 362 (498)
+.
T Consensus 129 ~~ 130 (133)
T 3fk8_A 129 AK 130 (133)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 393
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=95.63 E-value=0.017 Score=54.36 Aligned_cols=95 Identities=9% Similarity=0.016 Sum_probs=61.1
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHh----------CCC------------Ccc
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAER----------KPI------------GQI 211 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~----------~~~------------~~~ 211 (498)
++|+.|.+.||+.|..-.|.+.+++++++.. +.|..|.++........+++ .++ .+.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 5566667999999999999999999999765 68888888743222222221 111 123
Q ss_pred ccee------------eeeEEEEeCCCCcCCCCccccc----CCCCHHHHHHHHHHH
Q 010886 212 FFRR------------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (498)
Q Consensus 212 ~~I~------------~~PTl~~f~~g~~~~~~~~~Y~----G~r~~~~Iv~fv~k~ 252 (498)
|++. ..|+..++-+.+.. ...+. .+|+.++|++.+...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I---~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKL---KLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBE---EEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 4452 37898888544332 11222 357899999888764
No 394
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.62 E-value=0.0088 Score=56.22 Aligned_cols=92 Identities=8% Similarity=0.079 Sum_probs=58.2
Q ss_pred hhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+...+.....++++|+ |+.+-| ....+.+..+|..+. .+.|+.+... ...++.+|+|.+.||+++|+++. .
T Consensus 110 f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~~~G~-~ 184 (217)
T 2trc_P 110 FLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDVLPTLLVYKGGE-L 184 (217)
T ss_dssp HHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGGCSEEEEEETTE-E
T ss_pred HHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCCCCEEEEEECCE-E
Confidence 4555543322345555 444422 123466677777763 6778887643 34578899999999999998543 3
Q ss_pred eeeecCCCC-------hhHHHHHHHhcc
Q 010886 344 PVVYYGSFN-------NSRLSEVMEQNK 364 (498)
Q Consensus 344 ~~~y~g~~~-------~~~L~~fi~~~~ 364 (498)
...+.|..+ .+.|..||.++.
T Consensus 185 v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 185 ISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 344555443 488999998764
No 395
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.59 E-value=0.036 Score=47.20 Aligned_cols=67 Identities=22% Similarity=0.368 Sum_probs=47.8
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhcc
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~~ 364 (498)
.+.+..++..+ ..+.|..+... +..+++++|+|.+.|++++++++ .....+.|. +.+.|.++|+...
T Consensus 65 ~~~l~~l~~~~-~~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 65 APYYIELSENY-PSLMFLVIDVD--ELSDFSASWEIKATPTFFFLRDG-QQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp HHHHHHHHHHC-TTSEEEEEETT--TSHHHHHHTTCCEESEEEEEETT-EEEEEEESC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEEEeCc--ccHHHHHHcCCCcccEEEEEcCC-eEEEEEeCC-CHHHHHHHHHHHh
Confidence 45556677666 35677776532 24779999999999999999653 333456777 7889999998753
No 396
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.58 E-value=0.022 Score=48.04 Aligned_cols=78 Identities=10% Similarity=0.175 Sum_probs=52.5
Q ss_pred EEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecC------
Q 010886 280 VKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG------ 349 (498)
Q Consensus 280 ~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g------ 349 (498)
++|+ |+.+-+ ....|.+..+|.++. .+.|..++..++ .++|+|.+.||+++|+++.. ...+.|
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~-----~~~~~v~~~PT~~~fk~G~~-v~~~~G~~~~gg 97 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC-----IQHYHDNCLPTIFVYKNGQI-EAKFIGIIECGG 97 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT-----STTCCGGGCSEEEEEETTEE-EEEEESTTTTTC
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh-----HHHCCCCCCCEEEEEECCEE-EEEEeChhhhCC
Confidence 5555 444422 224577777888874 578888875432 47899999999999997543 223333
Q ss_pred -CCChhHHHHHHHhcc
Q 010886 350 -SFNNSRLSEVMEQNK 364 (498)
Q Consensus 350 -~~~~~~L~~fi~~~~ 364 (498)
.++.++|..++.++.
T Consensus 98 ~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 98 INLKLEELEWKLAEVG 113 (118)
T ss_dssp SSCCHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHcC
Confidence 357889999998753
No 397
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.58 E-value=0.029 Score=48.11 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=55.2
Q ss_pred hhhhhhhcCCCcEEEEEEe-cCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+.+.+.....++++|+.|. +-| ....+.+..++.++. .+.|+.+...++ .++|+|...||+++|+++..
T Consensus 20 ~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~-----~~~~~i~~~Pt~~~~~~G~~- 92 (135)
T 2dbc_A 20 YVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC-----IEHYHDNCLPTIFVYKNGQI- 92 (135)
T ss_dssp HHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS-----CSSCCSSCCSEEEEESSSSC-
T ss_pred HHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC-----cccCCCCCCCEEEEEECCEE-
Confidence 4444443323346555554 322 223466666777663 566777654332 26899999999999986543
Q ss_pred eeeecCCC-------ChhHHHHHHHhcc
Q 010886 344 PVVYYGSF-------NNSRLSEVMEQNK 364 (498)
Q Consensus 344 ~~~y~g~~-------~~~~L~~fi~~~~ 364 (498)
...+.|.. +.+.|.+++.++.
T Consensus 93 v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 93 EGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 33445543 6788999999864
No 398
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.45 E-value=0.012 Score=49.30 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=60.2
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEEe-c---CCCCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEE
Q 010886 262 YTKESMGKNFLAKT-GPHKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (498)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~l 336 (498)
+++.+.+++.+... ..++++++.|. + .|....+.+..++..+. .+.|..+... ....++++|+|.+.|++++
T Consensus 19 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 95 (130)
T 1wmj_A 19 CHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD--ELKEVAEKYNVEAMPTFLF 95 (130)
T ss_dssp CSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT--TSGGGHHHHTCCSSCCCCB
T ss_pred cCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc--chHHHHHHcCCCccceEEE
Confidence 44433355555431 12345555544 3 23345677777777764 4666666432 2367999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++++. ....+.| .+.+.|.++|++.
T Consensus 96 ~~~g~-~~~~~~g-~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 96 IKDGA-EADKVVG-ARKDDLQNTIVKH 120 (130)
T ss_dssp CTTTT-CCBCCCT-TCTTTHHHHHHHH
T ss_pred EeCCe-EEEEEeC-CCHHHHHHHHHHH
Confidence 96543 3334567 5778899999874
No 399
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=95.22 E-value=0.027 Score=46.87 Aligned_cols=70 Identities=20% Similarity=0.190 Sum_probs=47.3
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC---CCceeeecCCCChhHHHHHHHhcccC
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---GVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~---~~~~~~y~g~~~~~~L~~fi~~~~~~ 366 (498)
.+.+..++..+ ..+.|+.+... +..+++++|+|.+.|++++|++. +.....+.|.. ..+|.+.+.++..+
T Consensus 42 ~~~l~~l~~~~-~~v~~~~vd~~--~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 42 GQILPSIAEAN-KDVTFIKVDVD--KNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp HHHHHHHHHHC-TTSEEEEEETT--TCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHC-CCeEEEEEECC--CCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 35556667666 56777777543 24779999999999999999762 22223457764 45699999887543
No 400
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.21 E-value=0.27 Score=52.04 Aligned_cols=175 Identities=14% Similarity=0.083 Sum_probs=100.8
Q ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCCCcCCCC
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~ 232 (498)
..++-+.++.+-|..|..+....+++|. +.+.+.+-..| + . -...|++.+.++|...
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~-~s~~i~~~~~~-~-~-----------------~~~~p~~~~~~~~~~~--- 74 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAE-LSDKVTFKEDN-T-L-----------------PVRKPSFLITNPGSQQ--- 74 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHT-TCTTEEEEECT-T-S-----------------SSCSSEEEEECTTCCC---
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHH-hCCceEEEEcC-C-c-----------------ccCCCEEEEecCCCcc---
Confidence 3455566666678888777766666643 34555542211 1 0 0267999999887543
Q ss_pred cccccCCCCHHHHHHHHHHHh--hcCCcccccccchhhhhhhhhcCCCcE-EEEEEecCC-CC--CcHHHHHHHHhcccc
Q 010886 233 MTRFEGELSVDAVTDWFATAI--LKLPRIFYYTKESMGKNFLAKTGPHKV-KVIFFSKTG-ER--ASPFVRQISRNYWAY 306 (498)
Q Consensus 233 ~~~Y~G~r~~~~Iv~fv~k~~--~~~P~~~~it~~~~~~~fl~~~~~~~~-~vl~f~~~~-~~--~~~~~~~~A~~~~~~ 306 (498)
...|.|-..=.++..|+...+ .+.|.. ++ ++..+.. .... ..+ +++|+++.| .| ..+.+..++..+. .
T Consensus 75 ~i~f~g~p~g~e~~s~~~~l~~~~~~~~~--~~-~~~~~~i-~~~~-~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~ 148 (521)
T 1hyu_A 75 GPRFAGSPLGHEFTSLVLALLWTGGHPSK--EA-QSLLEQI-RDID-GDFEFETYYSLSCHNCPDVVQALNLMAVLNP-R 148 (521)
T ss_dssp SCEEESCCCGGGHHHHHHHHHHHTTCCCC--SC-HHHHHHH-HHCC-SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-T
T ss_pred eEEEeccCcchhHHHHHHHHHhhcCCCCC--CC-HHHHHHH-HhcC-CCcceEEEECCCCcCcHHHHHHHHHHHhHcC-c
Confidence 568988665555666665431 222322 22 2223333 2222 224 444445432 22 2345555666553 5
Q ss_pred ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 307 ~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+.+..++.. ..+++.++|+|.+.|++++ + + +. ...|..+.+.|.+|+...
T Consensus 149 v~~~~vd~~--~~~~~~~~~~i~svPt~~i--~-g-~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 149 IKHTAIDGG--TFQNEITERNVMGVPAVFV--N-G-KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEEEETT--TCHHHHHHTTCCSSSEEEE--T-T-EE-EEESCCCHHHHHHHHCCS
T ss_pred eEEEEEech--hhHHHHHHhCCCccCEEEE--C-C-EE-EecCCCCHHHHHHHHhhc
Confidence 666666532 3478999999999999977 2 2 22 345888899999998653
No 401
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.07 E-value=0.0045 Score=51.85 Aligned_cols=65 Identities=9% Similarity=0.157 Sum_probs=42.0
Q ss_pred CcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchh----hhHHHHhCCCCcccceeeeeEEE
Q 010886 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL----ATHLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~----~~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
+++.++++++ +.|.+|||++|++..+.+++. .+.+-.+|.+.... ...|.+..| ...+|++.
T Consensus 10 ~~~~i~~~~v--~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g------~~tvP~vf 75 (114)
T 3h8q_A 10 LVGLIERSRV--VIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITN------QKTVPNIF 75 (114)
T ss_dssp HHHHHHHCSE--EEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHS------CCSSCEEE
T ss_pred HHHHhccCCE--EEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhC------CCccCEEE
Confidence 4455655553 449999999998888777653 14566777774211 123555566 77999985
Q ss_pred EeCCC
Q 010886 222 AFPPG 226 (498)
Q Consensus 222 ~f~~g 226 (498)
+ +|
T Consensus 76 i--~g 78 (114)
T 3h8q_A 76 V--NK 78 (114)
T ss_dssp E--TT
T ss_pred E--CC
Confidence 4 66
No 402
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.99 E-value=0.0042 Score=53.48 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=46.6
Q ss_pred CCCcccccCCCcEEEEEecCCCCCCCCC-hHHHHHHHHHhhccceEEEEEcccch----hhhHHHHhCCCCcccceeeee
Q 010886 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLP 218 (498)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~i~va~Vdc~~~~----~~~~l~~~~~~~~~~~I~~~P 218 (498)
+.+++.+...+ ++.|++|||++|++. .+.+++... ..+.+..+|.+.+. ....|.+.+| +.++|
T Consensus 28 ~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~~~~~~~~L~~~~g------~~tVP 96 (129)
T 3ctg_A 28 AHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV---PKSKALVLELDEMSNGSEIQDALEEISG------QKTVP 96 (129)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSC
T ss_pred HHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc---cCCCcEEEEccccCCHHHHHHHHHHHhC------CCCCC
Confidence 34555665554 678999999999987 666654321 11556777877542 1245777778 88999
Q ss_pred EEEEeCCCC
Q 010886 219 SLVAFPPGC 227 (498)
Q Consensus 219 Tl~~f~~g~ 227 (498)
++ |.+|.
T Consensus 97 ~v--fi~g~ 103 (129)
T 3ctg_A 97 NV--YINGK 103 (129)
T ss_dssp EE--EETTE
T ss_pred EE--EECCE
Confidence 96 55663
No 403
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=94.88 E-value=0.08 Score=44.06 Aligned_cols=67 Identities=22% Similarity=0.338 Sum_probs=47.8
Q ss_pred HHHHHHHHhccccceEEEEEecc---------------------cccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCC
Q 010886 294 PFVRQISRNYWAYASFAFVLWRE---------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~---------------------~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~ 352 (498)
+.+..++.++. .+.+..+...+ .....+++.|++.+.|+++++.+++... .+.|..+
T Consensus 45 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~ 122 (136)
T 1zzo_A 45 PVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMS 122 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCC
T ss_pred HHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCC
Confidence 34455555565 66777776432 1135688999999999999996555444 6889889
Q ss_pred hhHHHHHHHh
Q 010886 353 NSRLSEVMEQ 362 (498)
Q Consensus 353 ~~~L~~fi~~ 362 (498)
.+.|.++|++
T Consensus 123 ~~~l~~~l~~ 132 (136)
T 1zzo_A 123 QDELTRRVTA 132 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 404
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=93.83 E-value=0.0049 Score=52.08 Aligned_cols=66 Identities=23% Similarity=0.187 Sum_probs=44.1
Q ss_pred HHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeC-CCCc--eeeecCCCChhHHHHHHHh
Q 010886 297 RQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD-PGVK--PVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 297 ~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~-~~~~--~~~y~g~~~~~~L~~fi~~ 362 (498)
..++..+...+.+..+...+.+...++++|+|.+.|++++|.. ++.. ...+.|..+.+.|.++|+.
T Consensus 45 ~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~ 113 (130)
T 2lst_A 45 PGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQ 113 (130)
Confidence 4455555544556666543223467999999999999999942 2322 3356788788888888875
No 405
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=94.80 E-value=0.026 Score=53.00 Aligned_cols=95 Identities=7% Similarity=-0.057 Sum_probs=60.9
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHH-------hCCC------------Ccccce
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE-------RKPI------------GQIFFR 214 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~-------~~~~------------~~~~~I 214 (498)
++|+.|.++||+.|..-.|.+.+++++++.. +.+..|.++.........+ +.++ .+.|++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 4455557999999999999999999999764 6888888874322222222 1221 124445
Q ss_pred e------------eeeEEEEeCCCCcCCCCcccc----cCCCCHHHHHHHHHHH
Q 010886 215 R------------GLPSLVAFPPGCKSSDCMTRF----EGELSVDAVTDWFATA 252 (498)
Q Consensus 215 ~------------~~PTl~~f~~g~~~~~~~~~Y----~G~r~~~~Iv~fv~k~ 252 (498)
. ..|+..++-+.+.. ...+ ..+|+.++|++.+...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I---~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKI---KATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 47898888554332 1122 2467899999888764
No 406
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=94.75 E-value=0.067 Score=45.20 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=34.2
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHH
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~ 361 (498)
..+++.|+|.+.|+++++.+.+.....+.|..+.+.|.++|+
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 104 GELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp SHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred hhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 468999999999999999655555556789889999988873
No 407
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.64 E-value=0.1 Score=43.58 Aligned_cols=67 Identities=19% Similarity=0.362 Sum_probs=47.5
Q ss_pred HHHHHHHHhccccceEEEEEeccc--------------------ccHHHHHHcCCCCCCEEEEEeCCCCceeeec---CC
Q 010886 294 PFVRQISRNYWAYASFAFVLWREE--------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYY---GS 350 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~--------------------~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~---g~ 350 (498)
+.+..++.++. .+.+..+...+. ....+++.|++.+.|+++++.+++... .+. |.
T Consensus 44 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~ 121 (136)
T 1lu4_A 44 PSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAA 121 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSC
T ss_pred HHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCc
Confidence 34455565665 566777664331 135688999999999999996555444 677 88
Q ss_pred CChhHHHHHHHh
Q 010886 351 FNNSRLSEVMEQ 362 (498)
Q Consensus 351 ~~~~~L~~fi~~ 362 (498)
.+.+.|.++|++
T Consensus 122 ~~~~~l~~~l~~ 133 (136)
T 1lu4_A 122 MSQDELSGRVAA 133 (136)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 899999999986
No 408
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=94.58 E-value=0.1 Score=44.12 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=34.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|+|...|+++++.+++.....+.|..+.+.|.++|+.
T Consensus 100 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 100 HALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (148)
T ss_dssp CHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred hhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 5689999999999999995545444556788888889998875
No 409
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=94.57 E-value=0.043 Score=52.51 Aligned_cols=92 Identities=9% Similarity=0.103 Sum_probs=57.1
Q ss_pred hhhhhhhcCCCcEEEE-EEecCC---CCCcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 010886 268 GKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (498)
Q Consensus 268 ~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~ 343 (498)
+...+.....++++|+ |+.+-| ....|.+..+|..|. .+.|+.|.... ..++.+|+|.+.||+++|+++..
T Consensus 123 f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~- 197 (245)
T 1a0r_P 123 FLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGEL- 197 (245)
T ss_dssp HHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEE-
T ss_pred HHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEE-
Confidence 4555533222445555 444422 223466777888775 47788776432 44788999999999999986432
Q ss_pred eeeecC-------CCChhHHHHHHHhcc
Q 010886 344 PVVYYG-------SFNNSRLSEVMEQNK 364 (498)
Q Consensus 344 ~~~y~g-------~~~~~~L~~fi~~~~ 364 (498)
...+.| .++.+.|..||..+.
T Consensus 198 v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 198 LSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccccccccHHHHHHHHHHcC
Confidence 222322 246678999999864
No 410
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.56 E-value=0.038 Score=46.60 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=42.1
Q ss_pred ceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 307 ~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+..+...+...+.++.+++|.+.||+++|+++ +......|-+..+.+..|++.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G-~ev~Ri~G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD-VESGRLEGYPGEDFFWPMLAR 107 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT-EEEEEEECCCCHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC-EEEeeecCCCCHHHHHHHHHH
Confidence 5677776554333568889999999999999954 444466899999999999875
No 411
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=94.54 E-value=0.011 Score=61.89 Aligned_cols=91 Identities=10% Similarity=0.081 Sum_probs=55.2
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEecCC---CCCcHHHHHHHHhccc--------cceEEEEEecccccHHHHHHcCCCC
Q 010886 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA--------YASFAFVLWREEESSIWWNTFEVES 330 (498)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~A~~~~~--------~~~f~~v~~~~~~~~~l~~~f~V~~ 330 (498)
++..+ ++..+.......++|.|+++-+ ....|.+..++..+.. .+.|+.|+.. ...+++++|+|.+
T Consensus 28 Lt~~~-F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~~y~V~~ 104 (470)
T 3qcp_A 28 LSGDD-FSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCRKYDINF 104 (470)
T ss_dssp CSCSC-GGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHHHTTCCS
T ss_pred CCHHH-HHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHHHcCCCc
Confidence 44444 4555543211235555665422 2245677778877752 3666666532 2378999999999
Q ss_pred CCEEEEEeCCC-CceeeecCCCChhH
Q 010886 331 APAIVFLKDPG-VKPVVYYGSFNNSR 355 (498)
Q Consensus 331 ~Pti~lfk~~~-~~~~~y~g~~~~~~ 355 (498)
+||+++|++++ ..+..|.|..+.+.
T Consensus 105 ~PTlilf~~gg~~~~~~y~G~r~~e~ 130 (470)
T 3qcp_A 105 VPRLFFFYPRDSCRSNEECGTSSLEH 130 (470)
T ss_dssp SCEEEEEEESSCCCTTSCCCCCCEEE
T ss_pred cCeEEEEECCCceEEEEeeCCCCHHH
Confidence 99999997654 34556777654443
No 412
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=94.14 E-value=0.22 Score=44.30 Aligned_cols=43 Identities=7% Similarity=0.190 Sum_probs=34.8
Q ss_pred CCCcEEEEEecCCCC-CCCCChHHHHHHHHHhhc---cceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEG---IANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~---~i~va~Vdc~ 194 (498)
.+++++|.|+.+||+ .|....+.+.++.+.++. .+.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 478999999999996 699999999988888753 2667777665
No 413
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.10 E-value=0.1 Score=39.21 Aligned_cols=70 Identities=11% Similarity=0.179 Sum_probs=45.2
Q ss_pred EEEEEecCC-CC--CcHHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHH
Q 010886 281 KVIFFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRL 356 (498)
Q Consensus 281 ~vl~f~~~~-~~--~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~-~~~~L 356 (498)
.|.++++-+ .| ..+.+..++.++.....+..+. ..+++++|||.+.|++++ + + +.+. .|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~-G-~~~~-~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV--D-G-ELKI-MGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE--T-T-EEEE-CSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE--C-C-EEEE-cCCCCCHHHH
Confidence 455666422 22 2355566677665555555553 456899999999999988 3 2 2333 4876 88888
Q ss_pred HHHH
Q 010886 357 SEVM 360 (498)
Q Consensus 357 ~~fi 360 (498)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
No 414
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.06 E-value=0.014 Score=53.63 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=35.5
Q ss_pred CCcEEEEEecCCCCCCCCChHHH---HHHHHHhhccceEEEEEcc
Q 010886 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (498)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~i~va~Vdc~ 194 (498)
.++.+|+|+..||+||+++.|.+ .++.+.+.+.+++..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 37899999999999999999986 6888888766777777755
No 415
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=93.67 E-value=0.19 Score=42.99 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=34.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+.+.|+|.+.|+++++.+.+.....+.|..+.+.|.++|+.
T Consensus 93 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 135 (151)
T 2f9s_A 93 RQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNL 135 (151)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHH
Confidence 3688999999999999995545444556788889999999986
No 416
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=93.41 E-value=0.3 Score=41.61 Aligned_cols=42 Identities=10% Similarity=0.256 Sum_probs=33.3
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+.|+|...|+++++.+.+.....+.|..+.+.|.++|+.
T Consensus 99 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 140 (152)
T 2lja_A 99 TFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNE 140 (152)
T ss_dssp HHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHH
T ss_pred hHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHH
Confidence 688999999999999997555443445677788889999875
No 417
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=92.76 E-value=0.41 Score=39.39 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=35.1
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+.+.|++.+.|+++++.+.+.....+.|..+.+.|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4588999999999999996555555567898889999998875
No 418
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=92.75 E-value=0.37 Score=41.10 Aligned_cols=43 Identities=16% Similarity=0.232 Sum_probs=35.0
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|+|...|+++++.+.+.....|.|..+.+.|.++|+.
T Consensus 96 ~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 138 (153)
T 2l5o_A 96 KAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDT 138 (153)
T ss_dssp CHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 5689999999999999996555554567888888899999876
No 419
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=92.67 E-value=0.4 Score=41.02 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=35.5
Q ss_pred HHHHHHcC--CCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFE--VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~--V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+.+.|+ +...|+++++.+.+.....+.|..+.+.|.++|+.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 56788899 88999999997666555667899999999999875
No 420
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=92.42 E-value=0.26 Score=42.95 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=32.9
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~--~~~~L~~fi~~ 362 (498)
..++++|+|.+.|+++++..++.....+ |.. +.+.+.++|+.
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 4789999999999999995444444455 877 78888888875
No 421
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=92.13 E-value=0.1 Score=49.23 Aligned_cols=51 Identities=6% Similarity=-0.076 Sum_probs=36.7
Q ss_pred CCcEEEEEecCC-CCCCC-----CChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCC
Q 010886 153 SKPWLIQVYSDG-SYLCG-----QFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 153 ~~~~lV~FYapw-C~~C~-----~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~ 207 (498)
+++++|.||+.| |+.|. .-.|.+.+. +.+ +.|..|+++........+++++
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~g-v~VvgIS~Ds~~~~~~f~~~~g 104 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPH-LKLIVITVDSPSSLARARHEHG 104 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTT-SEEEEEESSCHHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCC-CEEEEEECCCHHHHHHHHHHcC
Confidence 568899999888 99999 666666665 433 5788888875444455666666
No 422
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=91.68 E-value=0.04 Score=47.17 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=41.6
Q ss_pred CCcccccCCCcEEEEEecCCCCCCCCChHHHHHHHHHhhc-cceEEEEEcccch---h-hhHHHHhCCCCcccceeeeeE
Q 010886 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIR---L-ATHLAERKPIGQIFFRRGLPS 219 (498)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~i~va~Vdc~~~~---~-~~~l~~~~~~~~~~~I~~~PT 219 (498)
+|++.++.++ ++.|..|||++|++....+++. .. .+.+..+|.+.+. . ...|.+..| .+.+|+
T Consensus 6 ~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G------~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP--IIIFSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTG------RGTVPN 73 (127)
T ss_dssp HHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcC------CCCcce
Confidence 3556666655 7889999999998877666542 11 1345666666331 1 122334445 679999
Q ss_pred EEEeCCC
Q 010886 220 LVAFPPG 226 (498)
Q Consensus 220 l~~f~~g 226 (498)
+ |.+|
T Consensus 74 I--fI~G 78 (127)
T 3l4n_A 74 L--LVNG 78 (127)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 8 4566
No 423
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=91.28 E-value=0.086 Score=46.93 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=33.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc 193 (498)
+.++.+|+|+.-.|+||+++.|.+.++.+.+.+.+++..+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 467889999999999999999999988887766565555443
No 424
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=91.11 E-value=0.15 Score=46.25 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=44.2
Q ss_pred cCCCcEEEEEecCCCCCCCC-ChHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHHhCC
Q 010886 151 HDSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~-l~p~~~~~A~~l~~~-i-~va~Vdc~~~~~~~~l~~~~~ 207 (498)
+...++|+.|.+.||+.|.. -.|.+.+.+.+++.. + .|..|.++........+++.+
T Consensus 46 ~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~ 105 (176)
T 4f82_A 46 AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLH 105 (176)
T ss_dssp TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 33345556666999999998 899999999999765 5 788899886555566777777
No 425
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=91.10 E-value=0.76 Score=38.61 Aligned_cols=40 Identities=13% Similarity=0.222 Sum_probs=28.6
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|++.+.|+++++.+.+. +.+... +.+.|.++|++
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~--i~~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 104 SETAKQYAILTLPTNILLSPTGK--ILARDI-QGEALTGKLKE 143 (148)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSB--EEEESC-CHHHHHHHHHH
T ss_pred hHHHHhcCCCCcCEEEEECCCCe--EEEecC-CHHHHHHHHHH
Confidence 46899999999999999954343 222222 67778888875
No 426
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=90.70 E-value=0.86 Score=39.20 Aligned_cols=37 Identities=11% Similarity=0.245 Sum_probs=29.5
Q ss_pred CCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 327 ~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
++...|+++++.+.+.....+.|..+.+.|.++|+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8989999999965555545678888899999999863
No 427
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=90.43 E-value=1.2 Score=38.08 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=34.2
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 322 l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
+.+.|+|...|+++++.+.+.....+.|..+.+.|.++|+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 88999999999999997656555567898888889988875
No 428
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=90.05 E-value=1 Score=38.11 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=31.9
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHhc
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQN 363 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~--~~~~L~~fi~~~ 363 (498)
.+++.|++...|+++++.+.+.....+.|.. +.+.|.++|++.
T Consensus 96 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHH
T ss_pred hhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHH
Confidence 5788899999999999865554444556643 457899999875
No 429
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=89.92 E-value=1.2 Score=38.03 Aligned_cols=42 Identities=10% Similarity=0.271 Sum_probs=34.1
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+.|+|...|+++++.+.+.....+.|..+.+.|.+.|+.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 149 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIAT 149 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 589999999999999996555544566888888889888875
No 430
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=89.91 E-value=0.36 Score=41.26 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=36.7
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 319 ~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.+.|++...|+++++.+.+.....+.|..+.+.|.++|++.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLA 142 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHT
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhc
Confidence 467899999999999988865555455678888999999999875
No 431
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=89.87 E-value=0.17 Score=45.61 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=34.8
Q ss_pred CCCcEEEEEecCCCCCCCCChHHH-HHHHHHhhccceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLEGIANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l~~~i~va~Vdc~ 194 (498)
+.++.+|+||.++|++|..+.+.. .++++.+.+.+++--+...
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 456789999999999999999999 8888877666666666544
No 432
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=89.87 E-value=0.16 Score=41.57 Aligned_cols=38 Identities=13% Similarity=0.120 Sum_probs=31.1
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 319 ~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++++|+|.++||+++ ++ + .|.|..+.+.|.+|+.-
T Consensus 55 ~~~l~~~~~V~~~PT~~i--~G--~--~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII--NG--R--TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE--TT--E--EEESCCCHHHHHHHHTC
T ss_pred hHHHHHHcCCeEeCEEEE--CC--E--EecCCCCHHHHHHHhCC
Confidence 467999999999999777 32 2 47999999999999864
No 433
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=89.59 E-value=1.4 Score=36.89 Aligned_cols=77 Identities=14% Similarity=0.114 Sum_probs=44.1
Q ss_pred CcEEEEEEe-c-C--CCCCcHHHHHHHHhcccc-ceEEEEEecccccHH-------------------------HHHHcC
Q 010886 278 HKVKVIFFS-K-T--GERASPFVRQISRNYWAY-ASFAFVLWREEESSI-------------------------WWNTFE 327 (498)
Q Consensus 278 ~~~~vl~f~-~-~--~~~~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~-------------------------l~~~f~ 327 (498)
++++++.|. . + |....+.+..+...+.+. +.+..|...+ ..+ +++.|+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER--KDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS--SSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC--CHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 345555443 2 2 233345566666666654 5666665432 223 889999
Q ss_pred CCCCCEEEEEeCCCCceeeecCCCChhHH
Q 010886 328 VESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (498)
Q Consensus 328 V~~~Pti~lfk~~~~~~~~y~g~~~~~~L 356 (498)
+...|+++++.+.+.....+.|..+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~~~~~~~ 137 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGYENLDDF 137 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCGGGHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCHHHHHHH
Confidence 99999999995545443444554333333
No 434
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=89.45 E-value=0.19 Score=47.21 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=41.8
Q ss_pred CcEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCCCcccceeeeeEEEEeCCC
Q 010886 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl~~f~~g 226 (498)
..-++.|..+||++|++....+++. + +.+-.+|.+++.....|.+.++ ..++|+|. .+|
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~-i~~~~~~i~~~~~~~~l~~~~g------~~~vP~~~--~~g 227 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G-LSFEEIILGHDATIVSVRAVSG------RTTVPQVF--IGG 227 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEETTTTCCHHHHHHHTC------CSSSCEEE--ETT
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C-CceEEEECCCchHHHHHHHHhC------CCCcCEEE--ECC
Confidence 3447778899999999877666542 2 4566788876544456777788 78999985 355
No 435
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.53 E-value=0.5 Score=38.98 Aligned_cols=57 Identities=7% Similarity=-0.022 Sum_probs=35.8
Q ss_pred EEEEEecCCCCCCC------CChHHHHHHHHHhhccceEEEEEcccchhhh-HHHHhC--------CCCcccceeeeeEE
Q 010886 156 WLIQVYSDGSYLCG------QFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERK--------PIGQIFFRRGLPSL 220 (498)
Q Consensus 156 ~lV~FYapwC~~C~------~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~-~l~~~~--------~~~~~~~I~~~PTl 220 (498)
-++.|+.+||++|+ +....+++ -.+.+-.+|.+.++... .+.+.. + ...+|.|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~------~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g------~~tvP~v 76 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA------NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG------NPLPPQI 76 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSS------SCCSCEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH------cCCCEEEEECCCCHHHHHHHHHHhcccccccCC------CCCCCEE
Confidence 36778899999997 44433322 12678889998654322 344443 4 6688876
Q ss_pred EEeCCC
Q 010886 221 VAFPPG 226 (498)
Q Consensus 221 ~~f~~g 226 (498)
|.+|
T Consensus 77 --fi~g 80 (111)
T 2ct6_A 77 --FNGD 80 (111)
T ss_dssp --EETT
T ss_pred --EECC
Confidence 4555
No 436
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=88.45 E-value=1.2 Score=38.28 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=35.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++.
T Consensus 111 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 111 GTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred hHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999955554445568988999999999863
No 437
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=88.18 E-value=2.9 Score=36.54 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=36.1
Q ss_pred cceEEEEEecccccHHHHHHcCCCCCCEEEEEeCC-CCceeeecCCCChhHHHHHHHh
Q 010886 306 YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 306 ~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~-~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+..+...+.+...+.++|++.++|+++++... +..-..+.| ++.+++.++|+.
T Consensus 77 ~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 77 HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 44445554433233678999999999999999764 333233455 787776666654
No 438
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=87.25 E-value=2.1 Score=36.71 Aligned_cols=46 Identities=7% Similarity=0.132 Sum_probs=32.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHhccc
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQNKL 365 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~--~~~~L~~fi~~~~~ 365 (498)
..+.+.|+|...|+++++.+.+.....+.|.. +..++.+.+.++..
T Consensus 105 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 105 GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 57999999999999888866555555567764 45667777766543
No 439
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=86.98 E-value=0.35 Score=37.74 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=36.4
Q ss_pred EEEEecC----CCCCCCCChHHHHHHHHHhhccceEEEEEcc-----cchh-hhHHHHhCCCCccccee-----eeeEEE
Q 010886 157 LIQVYSD----GSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIRL-ATHLAERKPIGQIFFRR-----GLPSLV 221 (498)
Q Consensus 157 lV~FYap----wC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~-----~~~~-~~~l~~~~~~~~~~~I~-----~~PTl~ 221 (498)
++.|..+ ||++|++....+++. .+.+-.+|.+ +++. ..+|.+..| .. .+|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g------~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLG------RDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHT------CSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhC------CCCCCCCccCEEE
Confidence 4567889 999998766554432 2567778877 4432 234666666 66 899874
Q ss_pred EeCCC
Q 010886 222 AFPPG 226 (498)
Q Consensus 222 ~f~~g 226 (498)
+ .+|
T Consensus 70 i-~~g 73 (87)
T 1aba_A 70 A-PDG 73 (87)
T ss_dssp C-TTS
T ss_pred E-ECC
Confidence 3 255
No 440
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=86.98 E-value=1.4 Score=42.45 Aligned_cols=81 Identities=12% Similarity=0.057 Sum_probs=50.8
Q ss_pred cEEEEEecCCCCCCCCChHHHHHHHHHhhccceEEEEEcccc---------------hhhhHHHHhCCCCcccceeee--
Q 010886 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---------------RLATHLAERKPIGQIFFRRGL-- 217 (498)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~---------------~~~~~l~~~~~~~~~~~I~~~-- 217 (498)
..+..|.+++|++|.+....+++.+.... +..-.++.++. .....+.+++| ++++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G------~~tVyT 115 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG------RNGVYT 115 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT------CSCCCS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhC------CCcccC
Confidence 56667889999999998888888776532 21122332211 11233677788 8888
Q ss_pred eEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
|++++ +|.. .-|+.+.+.|.+-+.+.
T Consensus 116 PqI~I--ng~~-------~v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 116 PQAIL--NGRD-------HVKGADVRGIYDRLDAF 141 (270)
T ss_dssp SEEEE--TTTE-------EEETTCHHHHHHHHHHH
T ss_pred CEEEE--CCEE-------eecCCCHHHHHHHHHHh
Confidence 98655 6642 23445677888877654
No 441
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=86.67 E-value=0.87 Score=37.54 Aligned_cols=59 Identities=3% Similarity=0.103 Sum_probs=40.8
Q ss_pred HHHHHHHHhccccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHH
Q 010886 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (498)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi 360 (498)
+.+..++.++ .+.|..++..+ .+++.++|++. .|+|++|.++. . .+.|.++.+.|.+||
T Consensus 48 ~~L~~l~~e~--~i~~~~vDId~--d~~l~~~ygv~-VP~l~~~~dG~--~-v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 48 ASLRVLQKKS--WFELEVINIDG--NEHLTRLYNDR-VPVLFAVNEDK--E-LCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHS--CCCCEEEETTT--CHHHHHHSTTS-CSEEEETTTTE--E-EECSSCCCHHHHHHH
T ss_pred HHHHHHHHhc--CCeEEEEECCC--CHHHHHHhCCC-CceEEEEECCE--E-EEecCCCHHHHHHHh
Confidence 4444455444 26677776432 46789999996 99999987643 2 246888999999987
No 442
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=86.65 E-value=0.21 Score=43.16 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=38.8
Q ss_pred cccccCCCcEEEEEec----CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeeeeEEE
Q 010886 147 PSIFHDSKPWLIQVYS----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 147 ~~~v~~~~~~lV~FYa----pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
++.++.++ ++|..++ |||++|++....+++. .+.+..+|.++++.. ..|.+..| ...+|.|
T Consensus 29 ~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G------~~tvP~V- 94 (135)
T 2wci_A 29 QRQIAENP-ILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYAN------WPTFPQL- 94 (135)
T ss_dssp HHHHHHCS-EEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHT------CCSSCEE-
T ss_pred HHHhccCC-EEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHC------CCCcCEE-
Confidence 33444444 4443333 9999998777655432 256788898865432 23444445 6788886
Q ss_pred EeCCC
Q 010886 222 AFPPG 226 (498)
Q Consensus 222 ~f~~g 226 (498)
|.+|
T Consensus 95 -fI~G 98 (135)
T 2wci_A 95 -WVDG 98 (135)
T ss_dssp -EETT
T ss_pred -EECC
Confidence 5566
No 443
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=86.17 E-value=2.2 Score=36.06 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=30.8
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHh
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~--~~~~L~~fi~~ 362 (498)
.+.+.|++...|+++++.+.+.....+.|.. +...+.++|++
T Consensus 97 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 97 RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 3888999999998888765554444556764 56688888875
No 444
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=86.00 E-value=2 Score=36.55 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=27.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|+|...|+++++.+++.....+ .+.+.|.++|+.
T Consensus 99 ~~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (152)
T 2lrn_A 99 KDVLESYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHH
T ss_pred HHHHHHhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHH
Confidence 5688999999999999995433322222 345678888775
No 445
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=85.23 E-value=3.9 Score=34.45 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=32.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|++...|+++++-+++.....+.|..+.+.|.++|+.
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 4688899999999877775444444456888888888888775
No 446
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=85.15 E-value=0.54 Score=46.64 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=55.3
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhhhHHHHhCCC------------Cccccee----
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRR---- 215 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~~~l~~~~~~------------~~~~~I~---- 215 (498)
++++++.|| +.||+.|..-.+.+.+. ..+ .+.|..|+++........++++++ .+.|+|.
T Consensus 24 Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~~-~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 24 GKYTILFFFPKAGTSGSTREAVEFSRE--NFE-KAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TSEEEEEECSSTTSHHHHHHHHHHHHS--CCT-TEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHH--hhC-CCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 578889999 56898897655555431 112 256667777644333445555443 2355574
Q ss_pred eeeEEEEeC-CCCcCCCCccccc---CCCCHHHHHHHHHHH
Q 010886 216 GLPSLVAFP-PGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (498)
Q Consensus 216 ~~PTl~~f~-~g~~~~~~~~~Y~---G~r~~~~Iv~fv~k~ 252 (498)
.+|+..++- +|.. ...|. -...+++|++++.+.
T Consensus 101 ~~r~tfiId~~G~i----~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 101 TVRSTFLIDRWGFV----RKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp ECCEEEEECTTSBE----EEEEESCCSTTHHHHHHHHHHHH
T ss_pred CccEEEEECCCCEE----EEEEeCCCccccHHHHHHHHhhh
Confidence 466766664 4543 12344 355689999999775
No 447
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=85.07 E-value=2.9 Score=36.75 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=27.2
Q ss_pred CCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 327 ~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
++...|+++++.+.+.....+.|..+.+.|.++|+.
T Consensus 143 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 143 PASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp CTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 577899877776555544567888888999998875
No 448
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=84.96 E-value=0.36 Score=39.96 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=38.5
Q ss_pred cccCCCcEEEEEec-----CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeeeeEEEE
Q 010886 149 IFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (498)
Q Consensus 149 ~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~~ 222 (498)
.|++++ +|.|.. |||++|++....+++. .+.+-.+|.++++.. ..|.+..| ...+|.+
T Consensus 12 ~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g------~~tvP~i-- 75 (111)
T 3zyw_A 12 LTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSS------WPTYPQL-- 75 (111)
T ss_dssp HHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHT------CCSSCEE--
T ss_pred HHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHC------CCCCCEE--
Confidence 344444 356777 9999998877555432 246777888765443 22333335 6689987
Q ss_pred eCCC
Q 010886 223 FPPG 226 (498)
Q Consensus 223 f~~g 226 (498)
|.+|
T Consensus 76 fi~g 79 (111)
T 3zyw_A 76 YVSG 79 (111)
T ss_dssp EETT
T ss_pred EECC
Confidence 4566
No 449
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=84.64 E-value=1.9 Score=37.73 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=31.1
Q ss_pred HHHcCCCCCCEEEEEeCCCCceeeecCCCC-hhHHHHHHHh
Q 010886 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFN-NSRLSEVMEQ 362 (498)
Q Consensus 323 ~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~-~~~L~~fi~~ 362 (498)
.++|+|.+.|+++++...+.....+.|..+ .+.+.++|++
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 689999999999999544444444578887 8888888875
No 450
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=83.62 E-value=1.7 Score=40.58 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=42.0
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHHh
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAER 205 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~~ 205 (498)
++.+++.|| ++||+.|..-...+.+...+++.. +.|..|.++....+..-+++
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~ 110 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQ 110 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHS
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhh
Confidence 567788899 899999999999999999999876 68889998854444444443
No 451
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=83.53 E-value=2.8 Score=36.03 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.2
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHHHHHHHh
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~-~~~~L~~fi~~ 362 (498)
.+.+.|+|...|+++++.+.+.. .+.|.. +.+.|.++|++
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i--~~~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNV--LYAGTTPSLGELESVIKS 161 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCE--EEEEESCCHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEEcCCCcE--EEeCCCCCHHHHHHHHHH
Confidence 68889999999999999654432 337777 88889998876
No 452
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=83.18 E-value=0.84 Score=42.60 Aligned_cols=52 Identities=10% Similarity=-0.064 Sum_probs=41.1
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHH
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE 204 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~~~l~~ 204 (498)
++.+++.|| ++||+.|..-.+.+++...+++.. +.+..|.++....+..-++
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~ 105 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTN 105 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHT
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHH
Confidence 567888899 999999999999999999999865 6888899885443333343
No 453
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=82.84 E-value=1.1 Score=40.51 Aligned_cols=62 Identities=8% Similarity=0.054 Sum_probs=45.0
Q ss_pred CCcEEEEEe-cCCCCCCC-CChHHHHHHHHHh-hcc-c-eEEEEEcccchhhhHHHHhCCCCcccceeeeeEE
Q 010886 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALL-EGI-A-NTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l-~~~-i-~va~Vdc~~~~~~~~l~~~~~~~~~~~I~~~PTl 220 (498)
++.+++.|| +.||+.|. .-.+.|.+.+.++ +.. + .|..|.++....+...|++.+ +..||.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~------~~~f~lL 109 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD------IKKIKYI 109 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT------CCSSEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC------CCCceEE
Confidence 445556666 56999999 8889999999999 654 4 488888886555566778877 5446544
No 454
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=81.91 E-value=0.67 Score=42.50 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=33.4
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHH-HHHHHHh--hccceEEEEEcc
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL--EGIANTGMVELG 194 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l--~~~i~va~Vdc~ 194 (498)
.+.++.+|+|+...|+||+++.|.. ..+.+.+ .|.+++...+..
T Consensus 27 ~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 27 DDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 3467789999999999999998875 5566666 356777666654
No 455
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=81.64 E-value=1.1 Score=35.27 Aligned_cols=58 Identities=5% Similarity=-0.047 Sum_probs=35.2
Q ss_pred EEEEecCCCCCC------CCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeeeeEEEEeCCC
Q 010886 157 LIQVYSDGSYLC------GQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 157 lV~FYapwC~~C------~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~~f~~g 226 (498)
++.|+++||+.| ++..-.+++ -.+.+-.+|.+.++.. ..+.+..|.. ...+|.| |.+|
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~------~~i~~~~~di~~~~~~~~~l~~~~g~~----~~~vP~i--fi~g 68 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG------KRIQYQLVDISQDNALRDEMRTLAGNP----KATPPQI--VNGN 68 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCCEEEETTSCHHHHHHHHHHTTCT----TCCSCEE--EETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH------CCCceEEEECCCCHHHHHHHHHHhCCC----CCCCCEE--EECC
Confidence 567889999999 554433322 1257788898865332 2355555511 3489987 4455
No 456
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=81.51 E-value=3.3 Score=35.71 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=31.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|+|...|+.+++.+.+.....+.|..+.+.+.++|+.
T Consensus 115 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 115 GMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp CHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred hHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 4688999999999776665444444456788888888887764
No 457
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=80.99 E-value=0.63 Score=38.18 Aligned_cols=63 Identities=13% Similarity=0.114 Sum_probs=38.0
Q ss_pred ccccCCCcEEEEEec-----CCCCCCCCChHHHHHHHHHhhccceEEEEEcccchhh-hHHHHhCCCCcccceeeeeEEE
Q 010886 148 SIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLV 221 (498)
Q Consensus 148 ~~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~i~va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~ 221 (498)
+.++++++ |.|.. |||++|++....+++. .+.+-.+|.++++.. ..|.+..| ...+|++
T Consensus 13 ~~i~~~~V--vvy~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g------~~tvP~i- 77 (109)
T 3ipz_A 13 KLVNSEKV--VLFMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSN------WPTFPQL- 77 (109)
T ss_dssp HHHTSSSE--EEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHT------CSSSCEE-
T ss_pred HHHccCCE--EEEEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHC------CCCCCeE-
Confidence 34455543 33444 6999998877555542 256777888755432 23444445 6799976
Q ss_pred EeCCC
Q 010886 222 AFPPG 226 (498)
Q Consensus 222 ~f~~g 226 (498)
|.+|
T Consensus 78 -fi~g 81 (109)
T 3ipz_A 78 -YIGG 81 (109)
T ss_dssp -EETT
T ss_pred -EECC
Confidence 4566
No 458
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=80.74 E-value=1.2 Score=37.32 Aligned_cols=50 Identities=10% Similarity=0.031 Sum_probs=32.3
Q ss_pred CCCCCCCCChHHHHHHHHHhhccce---EEEEEcccchhh-hHHHHhCCCCcccceeeeeEEEEeCCC
Q 010886 163 DGSYLCGQFSGAWKTIAALLEGIAN---TGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 163 pwC~~C~~l~p~~~~~A~~l~~~i~---va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~~f~~g 226 (498)
|||++|++....+++. + +. +..+|..+++.. ..|.+..| ...+|.+ |.+|
T Consensus 29 p~Cp~C~~ak~lL~~~-----g-v~~~~~~~~dv~~~~~~~~~l~~~sg------~~tvP~v--fI~g 82 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-----G-VDPAKFAAYNVLEDPELREGIKEFSE------WPTIPQL--YVNK 82 (121)
T ss_dssp BCTTHHHHHHHHHHHH-----T-BCGGGEEEEECTTCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CCCccHHHHHHHHHHc-----C-CCcceEEEEEecCCHHHHHHHHHHhC------CCCCCeE--EECC
Confidence 6999998887666553 1 33 777888755433 23444445 6688987 4566
No 459
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=80.30 E-value=0.64 Score=39.00 Aligned_cols=50 Identities=6% Similarity=-0.011 Sum_probs=31.2
Q ss_pred CCCCCCCCChHHHHHHHHHhhccce-EEEEEcccchhh-hHHHHhCCCCcccceeeeeEEEEeCCC
Q 010886 163 DGSYLCGQFSGAWKTIAALLEGIAN-TGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 163 pwC~~C~~l~p~~~~~A~~l~~~i~-va~Vdc~~~~~~-~~l~~~~~~~~~~~I~~~PTl~~f~~g 226 (498)
|||++|++..-.+++. .+. +-.+|.++++.. ..|.+..+ ...+|++ |.+|
T Consensus 33 p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg------~~tvP~v--fI~g 84 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSN------WPTIPQV--YLNG 84 (118)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhC------CCCcCeE--EECC
Confidence 6999998776555432 143 777888765443 22333335 6789987 4566
No 460
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=80.15 E-value=6 Score=34.71 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=33.2
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+.+.|++...|+.+++-+.+.....+.|..+.+.+.++|..
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688899999999888886555544566788888888887765
No 461
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=79.50 E-value=11 Score=31.48 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=27.0
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+.|+|...|+++++.+.+.. .+.. .+.+.|.+.|++
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~i--~~~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGKI--LAKN-LRGEELKKKIEN 145 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBE--EEES-CCHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCEE--EEcc-CCHHHHHHHHHH
Confidence 68899999999999999544432 2222 266777777664
No 462
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=79.46 E-value=2.8 Score=37.41 Aligned_cols=55 Identities=2% Similarity=-0.084 Sum_probs=42.5
Q ss_pred CCcEEEEEe-cCCCCCCCCChHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHHhCC
Q 010886 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (498)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-i-~va~Vdc~~~~~~~~l~~~~~ 207 (498)
++.+++.|| ..||+-|..-.+.|.+.+.+++.. + .|..|.++.-......|++.+
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 455556666 469999999999999999999855 4 488899986655566777776
No 463
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=78.46 E-value=5.8 Score=34.93 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=29.1
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCC----------CChhHHHHHHHhc
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVMEQN 363 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~----------~~~~~L~~fi~~~ 363 (498)
..+.+.|++...|+++++.+.+. +.+.|. .+.+.|.+.|+..
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~--i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRL--LRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCB--EEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred chHHHHcCCCCCCeEEEECCCCc--EEEEEecCCccccccccCHHHHHHHHHHH
Confidence 45888999999999999854443 233333 3567788888763
No 464
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=78.19 E-value=1.3 Score=41.44 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=32.9
Q ss_pred CCCcEEEEEecCCCCCCCCChHH-HHHHHHHh--hccceEEEEEcc
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGA-WKTIAALL--EGIANTGMVELG 194 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~-~~~~A~~l--~~~i~va~Vdc~ 194 (498)
+.++.+|+|....|+||+++.|. ..++.+.+ .|.+++.-.+..
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 45678999999999999999986 46777777 456666655544
No 465
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=77.25 E-value=1.9 Score=47.02 Aligned_cols=49 Identities=12% Similarity=0.082 Sum_probs=37.3
Q ss_pred CCCccccccccCCCCCCCH--HHHHHHHHHHHhhcCCCCCCChHHHHHHHHhhhhH
Q 010886 33 RSFPPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYEL 86 (498)
Q Consensus 33 ~~~~~d~y~ilgv~~~a~~--~~ik~ayr~l~~~~HPD~~~~~~~~f~~i~~ay~~ 86 (498)
.+...|||.+||++..... .+|++|||++++..+++ .+++..+..|..+
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 3445679999999766554 66999999999966554 4688888887765
No 466
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=76.61 E-value=4.2 Score=35.37 Aligned_cols=63 Identities=21% Similarity=0.301 Sum_probs=38.3
Q ss_pred CcEEEEEEe-cCC---CCCcHHHHHHHHhccc--cceEEEEEeccccc----------------------HHHHHHcCCC
Q 010886 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWA--YASFAFVLWREEES----------------------SIWWNTFEVE 329 (498)
Q Consensus 278 ~~~~vl~f~-~~~---~~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~----------------------~~l~~~f~V~ 329 (498)
++++|+.|. .-| ....+.+..++.++.+ .+.+..|...+... ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 346666554 322 1123455556666664 45566665432211 5789999999
Q ss_pred CCCEEEEEeCC
Q 010886 330 SAPAIVFLKDP 340 (498)
Q Consensus 330 ~~Pti~lfk~~ 340 (498)
..|+++++.+.
T Consensus 128 ~~Pt~~lid~~ 138 (165)
T 3s9f_A 128 SIPTLIGLNAD 138 (165)
T ss_dssp SSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 99999999864
No 467
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=76.22 E-value=11 Score=29.40 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=33.7
Q ss_pred EEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 309 FAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 309 f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
+..++.. +.+++.++||+. .|+|++ .++. .+ .|.++.+.|.+|++..
T Consensus 29 ~~~vdid--~~~~l~~~~g~~-vPtl~~-~~G~--~v--~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 29 FFSVFID--DDAALESAYGLR-VPVLRD-PMGR--EL--DWPFDAPRLRAWLDAA 75 (87)
T ss_dssp EEEEECT--TCHHHHHHHTTT-CSEEEC-TTCC--EE--ESCCCHHHHHHHHHTC
T ss_pred eEEEECC--CCHHHHHHhCCC-cCeEEE-ECCE--EE--eCCCCHHHHHHHHHHH
Confidence 4555533 246799999997 999888 5432 23 2888999999999763
No 468
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=75.85 E-value=4.5 Score=35.79 Aligned_cols=44 Identities=2% Similarity=-0.045 Sum_probs=31.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceee---------ecCCCChhHHHHHHHhc
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVV---------YYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~---------y~g~~~~~~L~~fi~~~ 363 (498)
..+.+.|+|...|+++++.+.+..... +.|..+.+.|.+.|+..
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 468889999999999999654433222 34666778888888753
No 469
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=75.84 E-value=4.7 Score=33.80 Aligned_cols=45 Identities=24% Similarity=0.429 Sum_probs=30.7
Q ss_pred HHHHHHHHhcc--ccceEEEEEecccc----------------------cHHHHHHcCCCCCCEEEEEe
Q 010886 294 PFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 294 ~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~V~~~Pti~lfk 338 (498)
+.+..++.++. ..+.+..+...+.. ...+++.|+|...|+++++.
T Consensus 48 p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid 116 (146)
T 1o8x_A 48 PQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVD 116 (146)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEE
Confidence 44555666665 35566666543211 25689999999999999997
No 470
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=75.60 E-value=4.4 Score=33.70 Aligned_cols=19 Identities=37% Similarity=0.496 Sum_probs=17.2
Q ss_pred HHHHHHcCCCCCCEEEEEe
Q 010886 320 SIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk 338 (498)
..+++.|+|...|+++++.
T Consensus 98 ~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 98 SELGKTFGVESIPTLITIN 116 (144)
T ss_dssp HHHHHHHTCCSSSEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEE
Confidence 4688999999999999997
No 471
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=75.43 E-value=1.3 Score=40.00 Aligned_cols=39 Identities=5% Similarity=-0.154 Sum_probs=30.3
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHHHh-hccceEE
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGIANTG 189 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l-~~~i~va 189 (498)
.+.++.+|+|....|+||+++.|...++.++. .+.+++.
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v 51 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVR 51 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 46678899999999999999999888876665 4455443
No 472
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=75.42 E-value=1.1 Score=39.32 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=33.8
Q ss_pred cceEEEEEecccccHHHHHHcCC--CCCCEEEEEeCCCCceeeecCC----------CChhHHHHHHHh
Q 010886 306 YASFAFVLWREEESSIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVMEQ 362 (498)
Q Consensus 306 ~~~f~~v~~~~~~~~~l~~~f~V--~~~Pti~lfk~~~~~~~~y~g~----------~~~~~L~~fi~~ 362 (498)
...|..|..... ...++..|++ ..+||+++|..++.....+.|. .+.+.|.++|+.
T Consensus 78 ~~~~~~v~~d~~-~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 78 SHNFVMVNLEDE-EEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp HTTSEEEEEEGG-GSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHH
T ss_pred CCeEEEEEecCC-chHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHH
Confidence 456777764332 1226678888 5599999994333322234453 567778888775
No 473
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=74.92 E-value=5.3 Score=39.90 Aligned_cols=43 Identities=14% Similarity=0.259 Sum_probs=33.3
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
..+++.|+|...|+++++-+.+.....+.|..+.+.|.++|++
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688999999999999985555444556788888888888764
No 474
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=74.10 E-value=1.1 Score=43.92 Aligned_cols=72 Identities=7% Similarity=-0.023 Sum_probs=44.5
Q ss_pred EEEEEecCC---CCCcHHHHHHHHhccccceEEEEEeccc-c-cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 010886 281 KVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREE-E-SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (498)
Q Consensus 281 ~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~-~-~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~ 355 (498)
+|.|+.+-+ +...|.+..+|.++ .+..+...+. + .++++++++|+++||+++ ++ + .|.|..+.++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G-~---~~~G~~~~~~ 270 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII--NG-R---TYTGVRSLEA 270 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT-E---EEESCCCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEE--CC-E---EecCCCCHHH
Confidence 566666532 22334455455433 2333322222 2 478999999999999655 33 2 3899999999
Q ss_pred HHHHHHh
Q 010886 356 LSEVMEQ 362 (498)
Q Consensus 356 L~~fi~~ 362 (498)
|.+|+.-
T Consensus 271 L~~~l~~ 277 (291)
T 3kp9_A 271 LAVASGY 277 (291)
T ss_dssp HHHHTCC
T ss_pred HHHHHCC
Confidence 9999863
No 475
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=73.83 E-value=12 Score=32.60 Aligned_cols=69 Identities=9% Similarity=0.159 Sum_probs=41.4
Q ss_pred HHHHHHHHhcc-ccceEEEEEeccc--c-cHHHHHHcCCC-----------------------CCCEEEEEeCCCCceee
Q 010886 294 PFVRQISRNYW-AYASFAFVLWREE--E-SSIWWNTFEVE-----------------------SAPAIVFLKDPGVKPVV 346 (498)
Q Consensus 294 ~~~~~~A~~~~-~~~~f~~v~~~~~--~-~~~l~~~f~V~-----------------------~~Pti~lfk~~~~~~~~ 346 (498)
+.+..+..++. ..+.+..|..... + .....++++++ ..|+++++-+.+.....
T Consensus 80 ~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 80 PALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 33444555554 3455666654322 1 14566777764 68999998655544445
Q ss_pred ecCCCC--hhHHHHHHHh
Q 010886 347 YYGSFN--NSRLSEVMEQ 362 (498)
Q Consensus 347 y~g~~~--~~~L~~fi~~ 362 (498)
+.|..+ .++|.++|+.
T Consensus 160 ~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 160 IAGPAEWASEDALKLIRA 177 (186)
T ss_dssp EESCCCTTSHHHHHHHHH
T ss_pred EecCCccCHHHHHHHHHH
Confidence 677654 6778888875
No 476
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=73.53 E-value=15 Score=31.00 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=30.8
Q ss_pred HHHHHcCCCCCC---------------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~P---------------ti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+.|||...| +++++-+.+.....+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 478889998777 677775555544566788888888888765
No 477
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=72.83 E-value=5.6 Score=33.18 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=30.6
Q ss_pred HHHHHHHHhcc--ccceEEEEEecccc----------------------cHHHHHHcCCCCCCEEEEEe
Q 010886 294 PFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVESAPAIVFLK 338 (498)
Q Consensus 294 ~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~V~~~Pti~lfk 338 (498)
+.+..++.++. ..+.+..|...+.. ...+++.|+|...|+++++.
T Consensus 48 ~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid 116 (144)
T 1i5g_A 48 PQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVE 116 (144)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEE
Confidence 44555666665 35566666543211 25689999999999999996
No 478
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=69.67 E-value=2.8 Score=37.24 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=29.4
Q ss_pred CCCcEEEEEecCCCCCCCCChHHH-HHHHHHhh--ccceEEEEE
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLE--GIANTGMVE 192 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l~--~~i~va~Vd 192 (498)
+.++.++.|+.+.|++|.++.+.. .++.+.+. +.+++.-..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 456789999999999999999987 46666663 345444333
No 479
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=69.17 E-value=11 Score=32.17 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=30.7
Q ss_pred HHHHHcCCCCCC---------------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 321 ~l~~~f~V~~~P---------------ti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.+.+.|+|...| +++++-+.+.....|.|..+.+.|.+.|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 578899998666 777775545444557888888888888765
No 480
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=69.03 E-value=18 Score=28.60 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=36.6
Q ss_pred ccceEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
..+.|..++..+.+.+++.++|| .+.|+++ .++. .+ ..+.++.+.|.++|...
T Consensus 42 ~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~--~~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 42 DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQ--FL-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSS--EE-EESSCCHHHHHHHHHSS
T ss_pred hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCE--EE-EecCCCHHHHHHHHHHH
Confidence 34678887765323478999999 8999763 4432 22 34567889999999763
No 481
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=67.99 E-value=3 Score=38.26 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=30.1
Q ss_pred cCCCcEEEEEecCCCCCCCCChHHHHHHHH-Hh--hccceEEEEE
Q 010886 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAA-LL--EGIANTGMVE 192 (498)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~-~l--~~~i~va~Vd 192 (498)
.+.++.+|+|...-|++|+++.+.....-+ .+ .|.+++.-.+
T Consensus 13 ~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 13 PAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 346778999999999999999987765544 55 4555554333
No 482
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=66.66 E-value=5.3 Score=36.17 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=33.8
Q ss_pred HHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHHh
Q 010886 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~~ 253 (498)
.++.++| |.|.||++++.+|+. ...+.|..+.+.+.+.+.+.+
T Consensus 167 ~~a~~~g------v~g~Pt~~i~~~G~~----~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 167 QRVAQWG------ISGFPALVVESGTDR----YLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHTT------CCSSSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHcC------CcccceEEEEECCEE----EEeccCCCCHHHHHHHHHHHH
Confidence 3677888 999999999888853 124679999999999987763
No 483
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=65.95 E-value=16 Score=30.88 Aligned_cols=34 Identities=6% Similarity=0.098 Sum_probs=24.5
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 010886 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (498)
Q Consensus 322 l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~ 355 (498)
+.+.|++...|+++++.+.+.....+.|..+.++
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~ 138 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLDE 138 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHHH
Confidence 8899999999999999655544444566655443
No 484
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=65.20 E-value=1.8 Score=41.80 Aligned_cols=28 Identities=11% Similarity=-0.024 Sum_probs=23.7
Q ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHH
Q 010886 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIA 179 (498)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A 179 (498)
+.+..++.|.-|.|++|+++.++.++..
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l 173 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHL 173 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHh
Confidence 4678999999999999999988877543
No 485
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=61.47 E-value=11 Score=31.07 Aligned_cols=36 Identities=14% Similarity=0.342 Sum_probs=26.9
Q ss_pred HcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 325 TFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 325 ~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
.|+|...|+++++.+.+. +.+ +..+.+.|.++|++.
T Consensus 104 ~~~v~~~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB--EEE-CSCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC--EEe-cCCCHHHHHHHHHHH
Confidence 799999999999954332 333 567889999999864
No 486
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=56.38 E-value=9.7 Score=30.43 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=25.5
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCC---ChhHHHHHHHhc
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF---NNSRLSEVMEQN 363 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~---~~~~L~~fi~~~ 363 (498)
..+.+++++.+.|++ |.++ ..-..+.|.. +.+.|.++|+..
T Consensus 63 ~~l~~~~~v~~~Pt~--~~~g-~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV--FIGG-KQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHSCCSSCEE--EETT-EEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHhCCCCcCEE--EECC-EEECChHHHHHHHhCChHHHHHHHc
Confidence 468899999999998 4332 2211223322 445688888764
No 487
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=54.47 E-value=58 Score=28.58 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=31.0
Q ss_pred HHHHHHcCCC-----CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHhc
Q 010886 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQN 363 (498)
Q Consensus 320 ~~l~~~f~V~-----~~Pti~lfk~~~~~~~~y~g~~----~~~~L~~fi~~~ 363 (498)
..+.+.|++. ..|+++++.+.+.....+.|.. +.++|.+.|+..
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4578889998 8899999965554444445543 567788888763
No 488
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=54.25 E-value=12 Score=32.89 Aligned_cols=65 Identities=8% Similarity=-0.165 Sum_probs=39.9
Q ss_pred cHHHHHHHHhccccceEEEEEecccccHHHHHHcC---CCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFE---VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~---V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.|.+..++..+. .+.|..+... +.+++..+|+ +.+.||++++++++.....+ |... ..+.+.+.+
T Consensus 73 ~P~l~~l~~~~~-~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 73 LAALDFAQRLQP-NIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VERP-QAVLDGGPQ 140 (167)
T ss_dssp HHHHHHHHHHCT-TEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESSC-HHHHHHCHH
T ss_pred HHHHHHHHHHCC-CcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCCC-HHHHHhHHH
Confidence 466666766553 4566665422 2356778887 98999999998764433333 5443 445555554
No 489
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=54.12 E-value=26 Score=28.80 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=26.0
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHH
Q 010886 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (498)
Q Consensus 322 l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~ 361 (498)
+.+.|+|...|+++++.+.+. +.+.+ .+.+.|.+||+
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp HTTCSCCTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred hhhhcCCCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 467899999999999965442 33332 25688888886
No 490
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=53.35 E-value=23 Score=31.38 Aligned_cols=43 Identities=5% Similarity=0.066 Sum_probs=30.4
Q ss_pred HHHHHHcCCC-----CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHh
Q 010886 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~-----~~Pti~lfk~~~~~~~~y~g~~----~~~~L~~fi~~ 362 (498)
..+.+.|++. ..|+.+++.+.+.....+.|.. +.++|.+.|+.
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4688899998 8899999866554444455543 45678888775
No 491
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=52.60 E-value=32 Score=30.02 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=30.0
Q ss_pred HHHHHHcCCC------CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHh
Q 010886 320 SIWWNTFEVE------SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~------~~Pti~lfk~~~~~~~~y~g~~----~~~~L~~fi~~ 362 (498)
..+.+.|++. ..|+++++.+.+.....+.|.. +.++|.+.|+.
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4588899998 7899999955454444445543 56778888775
No 492
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=51.29 E-value=17 Score=31.26 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=31.6
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhc
Q 010886 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (498)
Q Consensus 319 ~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~~~~~~L~~fi~~~ 363 (498)
...+.+++||++.||+++ .++ + .+.|..+.+.|.++|+..
T Consensus 98 ~~~la~~~gI~gtPt~vi-~nG--~--~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVF-PNG--R--TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp HHHHHHHTTCCSSCEEEC-TTS--C--EEESCCCTTHHHHHHHHT
T ss_pred HHHHHHHhCCCccCEEEE-ECC--E--EeeCCCCHHHHHHHHHHH
Confidence 356889999999999988 432 2 357888899999999864
No 493
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=49.63 E-value=13 Score=31.06 Aligned_cols=61 Identities=10% Similarity=0.006 Sum_probs=34.5
Q ss_pred EEEEecCCCCCCCCChHHHHHHHHHhhcc-ceEEEEEcccchhh-hHHHHhC--------CCCcccceeeeeEEEEeCCC
Q 010886 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERK--------PIGQIFFRRGLPSLVAFPPG 226 (498)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~-i~va~Vdc~~~~~~-~~l~~~~--------~~~~~~~I~~~PTl~~f~~g 226 (498)
++.|.+++|+.|+-.. .=..+-..|+.. +.+-.+|.+.++.. ..+.++. | ...+|.| |.+|
T Consensus 2 V~vYtt~~c~~c~~kk-~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G------~~tvPQI--Fi~~ 72 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKK-KQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATG------YPLPPQI--FNES 72 (121)
T ss_dssp EEEEECTTCSCHHHHH-HHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSS------SCCSCEE--EETT
T ss_pred EEEEecCCCCCccchH-HHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCC------CcCCCEE--EECC
Confidence 5677889999993110 011222334443 68889999855332 2344555 4 5577765 4555
No 494
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=49.62 E-value=64 Score=29.00 Aligned_cols=41 Identities=12% Similarity=0.274 Sum_probs=28.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecC-----------CCChhHHHHHHHh
Q 010886 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYG-----------SFNNSRLSEVMEQ 362 (498)
Q Consensus 320 ~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g-----------~~~~~~L~~fi~~ 362 (498)
..+.+.|+|...|+++++.+.+. +.|.| ..+.+.|.+.|+.
T Consensus 133 ~~~~~~~~v~~~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 133 QSVAKAYGAACTPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp CHHHHHHTCCEESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred cHHHHHcCCCCCCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHH
Confidence 46889999999999999954332 34543 2346778888775
No 495
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=49.35 E-value=13 Score=32.67 Aligned_cols=37 Identities=11% Similarity=0.211 Sum_probs=28.7
Q ss_pred HHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.++++.| |.|.||+++ +|. .+.|..+.+.+.+.+.+.
T Consensus 140 ~~a~~~g------v~GtPt~vv--nG~-------~~~G~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 140 KIAKDNH------IKTTPTAFI--NGE-------KVEDPYDYESYEKLLKDK 176 (186)
T ss_dssp HHHHHTT------CCSSSEEEE--TTE-------ECSCTTCHHHHHHHHHC-
T ss_pred HHHHHcC------CCCCCeEEE--CCE-------EcCCCCCHHHHHHHHHHH
Confidence 3778888 999999987 663 456888999999888654
No 496
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=49.21 E-value=40 Score=28.76 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=26.2
Q ss_pred HcCCCCCC------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 010886 325 TFEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (498)
Q Consensus 325 ~f~V~~~P------ti~lfk~~~~~~~~y~g~~~~~~L~~fi~~ 362 (498)
.|++.+.| +.+++-+.+.....+.|..+.+.|.+.|+.
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 36777788 777775445444556787788888888765
No 497
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=48.94 E-value=16 Score=31.07 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=23.6
Q ss_pred CCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHh
Q 010886 329 ESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (498)
Q Consensus 329 ~~~Pti~lfk~~~~~~~~y~g~~--~~~~L~~fi~~ 362 (498)
...|+++++. .+.....+.|.. +.+.|.+.|++
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 3579999998 555445566766 77888888875
No 498
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=46.82 E-value=87 Score=26.26 Aligned_cols=31 Identities=10% Similarity=0.201 Sum_probs=23.1
Q ss_pred HHHHHHcCCCC----CCEEEEEeCCCCceeeecCC
Q 010886 320 SIWWNTFEVES----APAIVFLKDPGVKPVVYYGS 350 (498)
Q Consensus 320 ~~l~~~f~V~~----~Pti~lfk~~~~~~~~y~g~ 350 (498)
..+.+.|++.+ .|+.+++.+.+.....+.|.
T Consensus 96 ~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 96 KKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp SHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS
T ss_pred HHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC
Confidence 56889999998 89999986555544456673
No 499
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=46.55 E-value=13 Score=32.07 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=32.3
Q ss_pred eEEEEEecccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-------CChhHHHHHHH
Q 010886 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-------FNNSRLSEVME 361 (498)
Q Consensus 308 ~f~~v~~~~~~~~~l~~~f~V~~~Pti~lfk~~~~~~~~y~g~-------~~~~~L~~fi~ 361 (498)
.|..|...+ +..++..++++.+.||+++|++.+.......|. ...+++.++|+
T Consensus 79 ~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 79 KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIE 138 (151)
T ss_dssp TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHH
T ss_pred CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHH
Confidence 466666532 223456789999999999998544433333555 44455555544
No 500
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=44.94 E-value=19 Score=32.44 Aligned_cols=37 Identities=8% Similarity=0.136 Sum_probs=29.8
Q ss_pred HHHHhCCCCcccceeeeeEEEEeCCCCcCCCCcccccCCCCHHHHHHHHHHH
Q 010886 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (498)
Q Consensus 201 ~l~~~~~~~~~~~I~~~PTl~~f~~g~~~~~~~~~Y~G~r~~~~Iv~fv~k~ 252 (498)
.+++++| |.|.||+++ +|. .+.|..+.+.+.+.+.+.
T Consensus 154 ~~a~~~g------V~gtPtfvv--nG~-------~~~G~~~~e~l~~~i~~~ 190 (202)
T 3gha_A 154 DLNQKMN------IQATPTIYV--NDK-------VIKNFADYDEIKETIEKE 190 (202)
T ss_dssp HHHHHTT------CCSSCEEEE--TTE-------ECSCTTCHHHHHHHHHHH
T ss_pred HHHHHcC------CCcCCEEEE--CCE-------EecCCCCHHHHHHHHHHH
Confidence 3677788 999999987 553 467889999999988775
Done!