BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010893
(498 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 202/317 (63%), Gaps = 6/317 (1%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+P H P+ PE HLG F+LR+LQ A++ FS NI+G GG+G VY+G+L
Sbjct: 4 KPQDHFFDVPAEED--PEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 197 NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNG 255
+GT VAVK+L Q + F+ EVE I H+NL+RL G+C+ T+R+LVY Y+ NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 256 NLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFD 315
++ LR + L W R +I LG+A+ LAYLH+ +PK++HRD+K++NIL+DE F+
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 316 AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR 375
A + DFGLAKL+ H+ V GT G++APEY ++G +EK+DV+ +GV+LLE ITG+
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 376 YPVDYGR--PQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPD 433
D R +V L++W+K +++ ++ E +VD +++ +++ + AL C
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 434 SDKRPKMSQVVRMLESE 450
+RPKMS+VVRMLE +
Sbjct: 301 PMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 193/297 (64%), Gaps = 3/297 (1%)
Query: 157 HLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK- 215
HLG F+LR+LQ A++ F NI+G GG+G VY+G+L +G VAVK+L Q +
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
F+ EVE I H+NL+RL G+C+ T+R+LVY Y+ NG++ LR + L W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
R +I LG+A+ LAYLH+ +PK++HRD+K++NIL+DE F+A + DFGLAKL+ H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS--EVNLVEWL 393
V G G++APEY ++G +EK+DV+ +GV+LLE ITG+ D R + +V L++W+
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 394 KMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLESE 450
K +++ ++ E +VD +++ +++ + AL C +RPKMS+VVRMLE +
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 169/284 (59%), Gaps = 4/284 (1%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L DL+ ATN F +IG G +G VY+G L +G VA+K+ Q ++F E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
RH +LV L+G+C E + IL+Y+Y+ NGNL++ L G ++WE R++I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL-LGAGKSHITTRVMGTFGY 344
L YLH ++HRD+KS NIL+DENF KI+DFG++K G++H+ V GT GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSED 404
+ PEY G L EKSDVYSFGVVL E + R + P+ VNL EW + E
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 405 VVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
+VDPN+ + +L++ TA++C+ S+ RP M V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 168/284 (59%), Gaps = 4/284 (1%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L DL+ ATN F +IG G +G VY+G L +G VA+K+ Q ++F E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
RH +LV L+G+C E + IL+Y+Y+ NGNL++ L G ++WE R++I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL-LGAGKSHITTRVMGTFGY 344
L YLH ++HRD+KS NIL+DENF KI+DFG++K ++H+ V GT GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSED 404
+ PEY G L EKSDVYSFGVVL E + R + P+ VNL EW + E
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 405 VVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
+VDPN+ + +L++ TA++C+ S+ RP M V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 171/300 (57%), Gaps = 23/300 (7%)
Query: 162 HWFTLRDLQSATNRFSK------DNIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 128
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 330 -GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN 388
++ + +R++GT Y+APE A G + KSD+YSFGVVLLE ITG VD R + ++
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLL 243
Query: 389 LVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L ++ + + ED +D + STS ++ A +C+ +KRP + +V ++L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 23/300 (7%)
Query: 162 HWFTLRDLQSATNRFSK------DNIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 128
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 330 -GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN 388
++ + R++GT Y+APE A G + KSD+YSFGVVLLE ITG VD R + ++
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLL 243
Query: 389 LVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L ++ + + ED +D + STS ++ A +C+ +KRP + +V ++L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 169/300 (56%), Gaps = 23/300 (7%)
Query: 162 HWFTLRDLQSATNRFSK------DNIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 65
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 122
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 330 -GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN 388
+ + R++GT Y+APE A G + KSD+YSFGVVLLE ITG VD R + ++
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLL 237
Query: 389 LVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L ++ + + ED +D + STS ++ A +C+ +KRP + +V ++L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 164/300 (54%), Gaps = 23/300 (7%)
Query: 162 HWFTLRDLQSATNRFSK------DNIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N G+GG+GVVY+G +N T VAVKKL
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 62
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ +H+NLV LLG+ +G LVY Y NG+L L C G
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS---CLDGTP 119
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 330 GKSHI-TTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN 388
+ +R++GT Y APE A G + KSD+YSFGVVLLE ITG VD R + ++
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLL 234
Query: 389 LVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L ++ + + ED +D STS ++ A +C+ +KRP + +V ++L+
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 6/198 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK--DFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+R + +G+ VAVK L+ A++ +F EV + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ +V EY++ G+L + L R L R+ + AK + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD+KS N+L+D+ + K+ DFGL++ L A + GT ++APE NEKS
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 360 DVYSFGVVLLEAITGRYP 377
DVYSFGV+L E T + P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 142/281 (50%), Gaps = 50/281 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNP----GQADKDFRVEVEAIGHVRHKN 231
+ + IIG GG+G VYR + G VAVK ++P Q ++ R E + ++H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARMKILLGTAKALAYL 290
++ L G C++ LV E+ G L + L G L W ++ A+ + YL
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYL 121
Query: 291 H-EAIEPKVVHRDIKSSNILI---DENFDA-----KISDFGLAKLLGAGKSHITTRV--M 339
H EAI P ++HRD+KSSNILI EN D KI+DFGLA+ + H TT++
Sbjct: 122 HDEAIVP-IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA 175
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP--------VDYGRPQSEVNLV- 390
G + ++APE + + ++ SDV+S+GV+L E +TG P V YG +++ L
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 391 ------EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLT 425
+ K+M ED +P+ +RPS + + L T
Sbjct: 236 PSTCPEPFAKLM------EDCWNPDPHSRPSFTNILDQLTT 270
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 6/198 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK--DFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+R + +G+ VAVK L+ A++ +F EV + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ +V EY++ G+L + L R L R+ + AK + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HR++KS N+L+D+ + K+ DFGL++ L A + GT ++APE NEKS
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 360 DVYSFGVVLLEAITGRYP 377
DVYSFGV+L E T + P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 186 WSFGVLMWEVFSEGKIPYE-NRSNSEV 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 191 WSFGVLMWEVFSEGKIPYE-NRSNSEV 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 188 WSFGVLMWEVFSEGKIPYE-NRSNSEV 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 188 WSFGVLMWEVFSEGKIPYE-NRSNSEV 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + ++ DF E E + + H LV+L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 208 WSFGVLMWEVFSEGKIPYE-NRSNSEV 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 9/207 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+ EN K+SDFG+ + + + +T + +PE + + KSDV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 362 YSFGVVLLEAIT-GRYPVDYGRPQSEV 387
+SFGV++ E + G+ P + R SEV
Sbjct: 189 WSFGVLMWEVFSEGKIPYE-NRSNSEV 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 31/265 (11%)
Query: 181 IIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G YG+VY G+ L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 240 IEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
E + E V G+L LR G + D +IL G L YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 141
Query: 297 KVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL- 354
++VHRDIK N+LI+ KISDFG +K L AG + T GT Y+APE + G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 355 -LNEKSDVYSFGVVLLEAITGRYPV-DYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
+ +D++S G ++E TG+ P + G PQ+ + V K V P I
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------VHPEIPE 249
Query: 413 RPSTSALKRALLTALRCVDPDSDKR 437
S SA +A + L+C +PD DKR
Sbjct: 250 --SMSAEAKAFI--LKCFEPDPDKR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 31/265 (11%)
Query: 181 IIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G YG+VY G+ L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
E + E V G+L LR G + D +IL G L YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 127
Query: 297 KVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL- 354
++VHRDIK N+LI+ KISDFG +K L AG + T GT Y+APE + G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 355 -LNEKSDVYSFGVVLLEAITGRYPV-DYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
+ +D++S G ++E TG+ P + G PQ+ + V K V P I
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------VHPEIPE 235
Query: 413 RPSTSALKRALLTALRCVDPDSDKR 437
S SA +A + L+C +PD DKR
Sbjct: 236 --SMSAEAKAFI--LKCFEPDPDKR 256
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 152/295 (51%), Gaps = 46/295 (15%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDEN--FDAKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DFGL++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 338 VMGTFGYVAPEY--ANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEW 392
++G F ++APE A EK+D YSF ++L +TG P D YG+ +++
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------IKF 238
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+ M+ E+ + P I P + + L C D KRP S +V+ L
Sbjct: 239 INMI-----REEGLRPTI---PEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKEL 284
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
+ ++G G +GVV + + VA+K++ + K F VE+ + V H N+V+L G
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK- 297
C+ LV EY G+L L G Y T M L ++ +AYLH +++PK
Sbjct: 71 CLNPV--CLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKA 126
Query: 298 VVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
++HRD+K N+L+ KI DFG A + ++H+T G+ ++APE +
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYS 182
Query: 357 EKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPS 415
EK DV+S+G++L E IT R P D G P ++M + P I+ P
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEIGGPA--------FRIMWAVHNGTR--PPLIKNLPK 232
Query: 416 TSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+L+T RC D +RP M ++V+++
Sbjct: 233 PI---ESLMT--RCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
+ ++G G +GVV + + VA+K++ + K F VE+ + V H N+V+L G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK- 297
C+ LV EY G+L L G Y T M L ++ +AYLH +++PK
Sbjct: 70 CLNPV--CLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKA 125
Query: 298 VVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
++HRD+K N+L+ KI DFG A + ++H+T G+ ++APE +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNYS 181
Query: 357 EKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPS 415
EK DV+S+G++L E IT R P D G P ++M + P I+ P
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPA--------FRIMWAVHNGTR--PPLIKNLPK 231
Query: 416 TSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+L+T RC D +RP M ++V+++
Sbjct: 232 PI---ESLMT--RCWSKDPSQRPSMEEIVKIM 258
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 46/295 (15%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDEN--FDAKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DFG ++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 338 VMGTFGYVAPEY--ANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEW 392
++G F ++APE A EK+D YSF ++L +TG P D YG+ +++
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------IKF 238
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+ M+ E+ + P I P + + L C D KRP S +V+ L
Sbjct: 239 INMI-----REEGLRPTI---PEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 46/295 (15%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDEN--FDAKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DF L++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 338 VMGTFGYVAPEY--ANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEW 392
++G F ++APE A EK+D YSF ++L +TG P D YG+ +++
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-------IKF 238
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+ M+ E+ + P I P + + L C D KRP S +V+ L
Sbjct: 239 INMI-----REEGLRPTI---PEDCPPRLRNVIEL-CWSGDPKKRPHFSYIVKEL 284
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 164 FTLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQL-MNG---TAVAVKKLLNNP 210
FT D A F+K+ +IG G +G V G L + G VA+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 211 GQADK-DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+ + DF E +G H N++ L G + T +++ E++ NG+L+ +LR + G
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN---DG 130
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
T + +L G A + YL + VHRD+ + NIL++ N K+SDFGL++ L
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 330 GKSHIT-TRVMG---TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQ 384
S T T +G + APE SDV+S+G+V+ E ++ YG RP
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPY 241
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ + + + Q R +D SAL + +L C D + RPK Q+V
Sbjct: 242 WDMTNQDVINAIEQDYRLPPPMD-------CPSALHQLMLD---CWQKDRNHRPKFGQIV 291
Query: 445 RMLE 448
L+
Sbjct: 292 NTLD 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGLA++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + K+++ + + FR EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK------ILLGTAKALAYLHEAIE 295
I+ QW G + E + + I TA+ + YLH
Sbjct: 104 DNLAIVT----------QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E KI DFGLA + S + G+ ++APE +
Sbjct: 152 -NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ + +SDVYS+G+VL E +TG P S +N + + MV R D +
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPY------SHINNRDQIIFMVG--RGYASPDLSKL 262
Query: 412 TRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
+ A+KR + CV ++RP Q++ +E ++ +P+
Sbjct: 263 YKNCPKAMKRLVAD---CVKKVKEERPLFPQILSSIELLQHSLPK 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GFVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 8 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 55
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 56 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 169
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 170 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 230 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 273
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 274 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL ++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 177 SKDNIIGDGGYGVVYRGQLMNGTA-----VAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++ +IG G +G VY+G L + VA+K L G +K DF E +G
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMGQFS 104
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N++RL G + +++ EY+ NG L+++LR G + + +L G A +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMK 161
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVA 346
YL VHRD+ + NIL++ N K+SDFGL+++L T G + A
Sbjct: 162 YLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDV 405
PE + SDV+SFG+V+ E +T YG RP E++ E +K + R
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT------YGERPYWELSNHEVMKAINDGFRLPTP 272
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
+D SA+ + + ++C + +RPK + +V +L+
Sbjct: 273 MD-------CPSAIYQLM---MQCWQQERARRPKFADIVSILD 305
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++++NIL+ EN K++DFGLA+L+ + + APE A G KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E T GR P
Sbjct: 197 DVWSFGILLTELTTKGRVP 215
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 31/285 (10%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V EY+ NG+L+ +LR T + +L G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 130
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--Y 344
+ YL + VHRD+ + NILI+ N K+SDFGL+++L T G +
Sbjct: 131 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSE 403
+PE SDV+S+G+VL E ++ YG RP E++ + +K
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK--------- 232
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
VD P L C D + RPK Q+V +L+
Sbjct: 233 -AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL----MNGTAVAVKKL-LNNPGQADK 215
G FT R++++ +R + IIG G G V G+L VA+K L + +
Sbjct: 39 GRSFT-REIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR 95
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF E +G H N++RL G G ++V EY+ NG+L+ +LR G T
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQ 152
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ +L G + YL + VHRD+ + N+L+D N K+SDFGL+++L
Sbjct: 153 LVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 336 TRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEW 392
T G + APE + SDV+SFGVV+ E + YG RP +
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------YGERPYWNMT---- 259
Query: 393 LKMMVQLRRSEDVVDPNIETR--PSTSALKRAL-LTALRCVDPDSDKRPKMSQVVRMLES 449
+ DV+ E P+ AL L C D +RP+ SQ+V +L++
Sbjct: 260 ---------NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 125
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++++NIL+ EN K++DFGLA+L+ + + APE A G KS
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E T GR P
Sbjct: 186 DVWSFGILLTELTTKGRVP 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL----MNGTAVAVKKL-LNNPGQADK 215
G FT R++++ +R + IIG G G V G+L VA+K L + +
Sbjct: 39 GRSFT-REIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR 95
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF E +G H N++RL G G ++V EY+ NG+L+ +LR G T
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQ 152
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSH 333
+ +L G + YL + VHRD+ + N+L+D N K+SDFGL+++L ++
Sbjct: 153 LVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 334 ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEW 392
TT + APE + SDV+SFGVV+ E + YG RP +
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------YGERPYWNMT---- 259
Query: 393 LKMMVQLRRSEDVVDPNIETR--PSTSALKRAL-LTALRCVDPDSDKRPKMSQVVRMLES 449
+ DV+ E P+ AL L C D +RP+ SQ+V +L++
Sbjct: 260 ---------NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++++NIL+ EN K++DFGLA+L+ + + APE A G KS
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E T GR P
Sbjct: 188 DVWSFGILLTELTTKGRVP 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 31/285 (10%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V EY+ NG+L+ +LR T + +L G A
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 147
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--Y 344
+ YL + VHRD+ + NILI+ N K+SDFGL+++L T G +
Sbjct: 148 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSE 403
+PE SDV+S+G+VL E ++ YG RP E++ + +K
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK--------- 249
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
VD P L C D + RPK Q+V +L+
Sbjct: 250 -AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 137/304 (45%), Gaps = 43/304 (14%)
Query: 164 FTLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNP 210
FT D A F+K+ +IG G +G V G+L VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KA 67
Query: 211 GQADK---DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD 267
G DK DF E +G H N++ L G + +++ EY+ NG+L+ +LR +
Sbjct: 68 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--- 124
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
G T + +L G + YL + VHRD+ + NIL++ N K+SDFG++++L
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 328 GAGKSHITTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQ 384
T G + APE SDV+S+G+V+ E ++ YG RP
Sbjct: 182 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------YGERPY 235
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
+++ + +K + + R +D I AL + +L C + RPK Q+V
Sbjct: 236 WDMSNQDVIKAIEEGYRLPPPMDCPI-------ALHQLMLD---CWQKERSDRPKFGQIV 285
Query: 445 RMLE 448
ML+
Sbjct: 286 NMLD 289
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+G+ YL + + A +AY+ V
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V E + NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GAVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ--LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRH 229
R+ + +G GG VY + ++N VA+K + P + + K F EV + H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+N+V ++ E LV EY+ L +++ G L+ + + T + L
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINF---TNQILDG 123
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
+ A + ++VHRDIK NILID N KI DFG+AK L T V+GT Y +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYP 377
A +E +D+YS G+VL E + G P
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+G+ YL + + A +AY+ V
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++++NIL+ EN K++DFGLA+L+ + + APE A G KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E T GR P
Sbjct: 194 DVWSFGILLTELTTKGRVP 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 81 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 237
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 238 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD+ ++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 81 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 237
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 238 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V E + NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEKS 359
D+ + NILI+ N K+SDFGL+++L T G + +PE S
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 360 DVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
DV+S+G+VL E ++ YG RP E++ + +K VD P
Sbjct: 232 DVWSYGIVLWEVMS------YGERPYWEMSNQDVIK----------AVDEGYRLPPPMDC 275
Query: 419 LKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
L C D + RPK Q+V +L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 103 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 150
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 259
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 260 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 303
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 104 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 260
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 261 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 78 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 125
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 234
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 235 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 278
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 22/271 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 132
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YANSGLLNE 357
D+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +S +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 358 KSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTS 417
+SDVY+FG+VL E +TG+ P S +N + + MV + P++ ++ ++
Sbjct: 193 QSDVYAFGIVLYELMTGQLPY------SNINNRDQIIEMV----GRGSLSPDL-SKVRSN 241
Query: 418 ALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
KR C+ D+RP +++ +E
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++++NIL+ EN K++DFGLA+L+ + + APE A G KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E T GR P
Sbjct: 187 DVWSFGILLTELTTKGRVP 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 303
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGL +L+ + T R F + APE A G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 362 KSDVWSFGILLTELTTKGRVP 382
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 96 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 143
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA--KLLGAGKSHITTRVMGTFGYVAPE---YA 350
++HRD+KS+NI + E+ KI DFGLA K +G SH ++ G+ ++APE
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 201
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ + +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDL 251
Query: 411 ETRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 252 SKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 104 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA--KLLGAGKSHITTRVMGTFGYVAPE---YA 350
++HRD+KS+NI + E+ KI DFGLA K +G SH ++ G+ ++APE
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 209
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ + +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDL 259
Query: 411 ETRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 260 SKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 385
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP 464
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 302 DIKSSNILIDENFDAKISDFGLA--KLLGAGKSHITTRVMGTFGYVAPE---YANSGLLN 356
D+KS+NI + E+ KI DFGLA K +G SH ++ G+ ++APE +S +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 357 EKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPST 416
+SDVY+FG+VL E +TG+ P S +N + + MV + P++ ++ +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIEMV----GRGSLSPDL-SKVRS 252
Query: 417 SALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
+ KR C+ D+RP +++ +E
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 38/287 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 232
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 233 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA--KLLGAGKSHITTRVMGTFGYVAPE---YA 350
++HRD+KS+NI + E+ KI DFGLA K +G SH ++ G+ ++APE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ + +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDL 231
Query: 411 ETRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPR 456
S A+KR + C+ D+RP Q++ +E +P+
Sbjct: 232 SKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 165 TLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNP 210
T D A ++F+K+ +IG G +G V G+L AVA+K L +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
+ +DF E +G H N+V L G G ++V E++ NG L+ +LR G
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH---DGQ 141
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
T + +L G A + YL + VHRD+ + NIL++ N K+SDFGL++++
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 331 KSHITTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEV 387
+ T G + APE SDV+S+G+V+ E ++ YG RP ++
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPYWDM 252
Query: 388 NLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+ + +K + + R +D + L + +L C + +RPK Q+V +L
Sbjct: 253 SNQDVIKAIEEGYRLPAPMD-------CPAGLHQLMLD---CWQKERAERPKFEQIVGIL 302
Query: 448 E 448
+
Sbjct: 303 D 303
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 129
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 188 KSDVWSFGILLTELTTKGRVP 208
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L + A KDF E E + +++H+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY---------LTWEARMKILLGTAKA 286
G C+EG I+V+EY+ +G+L ++LR D LT + I A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYV 345
+ YL VHRD+ + N L+ EN KI DFG+++ + + M ++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAIT-GRYP 377
PE +SDV+S GVVL E T G+ P
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 38/286 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPE---YAN 351
++HRD+KS+NI + E+ KI DFGLA + SH ++ G+ ++APE +
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIE 411
+ +SDVY+FG+VL E +TG+ P S +N + + MV + P++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIFMV----GRGYLSPDLS 232
Query: 412 TRPSTS--ALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIP 455
S A+KR + C+ D+RP Q++ +E +P
Sbjct: 233 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 24/272 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 302 DIKSSNILIDENFDAKISDFGLA--KLLGAGKSHITTRVMGTFGYVAPE---YANSGLLN 356
D+KS+NI + E+ KI DFGLA K +G SH ++ G+ ++APE +S +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 357 EKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPST 416
+SDVY+FG+VL E +TG+ P S +N + + MV + P++ ++ +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPY------SNINNRDQIIEMV----GRGSLSPDL-SKVRS 252
Query: 417 SALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
+ KR C+ D+RP +++ +E
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 92
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 144
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL---GAGKSHITTRVMGTFG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + H T
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 254
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 255 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 287
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 85
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 201 VWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 86
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 202 VWSFGILLTEIVTHGRIP 219
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 85
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 86 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 137
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 138 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 247
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 248 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 280
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 91
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 143
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 144 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 253
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 254 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 286
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 255
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 256 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 92
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 144
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 254
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 255 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 112
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 113 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 164
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 165 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 274
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 275 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 307
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 111
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 112 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 163
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 164 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 273
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 274 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 306
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNE 357
HRD++++NIL+ EN K++DFGLA+L+ + T R F + APE A G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 358 KSDVYSFGVVLLEAIT-GRYP 377
KSDV+SFG++L E T GR P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 88
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 89 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 140
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 141 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 250
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 251 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 255
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 256 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 288
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V E + NG+L+ +LR T + +L G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 130
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--Y 344
+ YL + VHRD+ + NILI+ N K+SDFGL+++L T G +
Sbjct: 131 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSE 403
+PE SDV+S+G+VL E ++ YG RP E++ + +K
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIK--------- 232
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
VD P L C D + RPK Q+V +L+
Sbjct: 233 -AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 90
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 91 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 142
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT---FG 343
+ YL K VHRD+ + N ++DE F K++DFGLA+ + + + G
Sbjct: 143 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 252
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 253 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 285
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 79
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 195 VWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 87
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 203 VWSFGILLTEIVTHGRIP 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 78
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 194 VWSFGILLTEIVTHGRIP 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V RG+L + VA+K L + + +F E +G H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G +++ E++ NG L+ +LR + G T + +L G A + YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT-TRVMG---TFGYVAPEY 349
VHRD+ + NIL++ N K+SDFGL++ L S T T +G + APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
SD +S+G+V+ E ++ G P Q +N +E +D P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-----------QDYRLP 241
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
P++ L + +L C D + RP+ QVV L+
Sbjct: 242 PPPDCPTS--LHQLMLD---CWQKDRNARPRFPQVVSALD 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 82
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 198 VWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 199 VWSFGILLTEIVTHGRIP 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V RG+L + VA+K L + + +F E +G H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G +++ E++ NG L+ +LR + G T + +L G A + YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT-TRVMG---TFGYVAPEY 349
VHRD+ + NIL++ N K+SDFGL++ L S T T +G + APE
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
SD +S+G+V+ E ++ G P Q +N +E +D P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-----------QDYRLP 243
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
P++ L + +L C D + RP+ QVV L+
Sbjct: 244 PPPDCPTS--LHQLMLD---CWQKDRNARPRFPQVVSALD 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 196 VWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 72
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 188 VWSFGILLTEIVTHGRIP 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 200 VWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 199 VWAFGVLLWEIAT 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 179 DNIIGDGGYGVVYRGQL-MNG---TAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V G L + G VA+K L + + + DF E +G H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L G + T +++ E++ NG+L+ +LR + G T + +L G A + YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT-TRVMG---TFGYVAPEY 349
VHR + + NIL++ N K+SDFGL++ L S T T +G + APE
Sbjct: 129 ---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDP 408
SDV+S+G+V+ E ++ YG RP ++ + + + Q R +D
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMTNQDVINAIEQDYRLPPPMD- 238
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
SAL + +L C D + RPK Q+V L+
Sbjct: 239 ------CPSALHQLMLD---CWQKDRNHRPKFGQIVNTLD 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 208 VWAFGVLLWEIAT 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 197 VWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 152
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 153 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 204
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 205 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 314
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 315 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 347
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 177
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 94
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 146
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL---GAGKSHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + H T
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 256
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 257 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 91
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 143
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 253
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 254 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 255
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 256 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 195 VWAFGVLLWEIAT 207
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 98
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 99 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 150
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 260
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 261 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 94
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 146
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 256
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 257 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK---SHITTRVMGTFG 343
+ +L K VHRD+ + N ++DE F K++DFGLA+ + + H T
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
++A E + KSDV+SFGV+L E +T P P +VN + ++Q RR
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR-- 255
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
++ P P + L+C P ++ RP S++V
Sbjct: 256 -LLQPEYCPDPLYEVM-------LKCWHPKAEMRPSFSELV 288
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 39/301 (12%)
Query: 165 TLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQL-MNGT---AVAVKKL-LNNP 210
T D A + F+K+ +IG G +G V G+L + G VA+K L +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
+ +DF E +G H N++ L G + ++V EY+ NG+L+ +L+ + G
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN---DGQ 120
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
T + +L G + + YL + VHRD+ + NILI+ N K+SDFGL+++L
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 331 KSHITTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEV 387
T G + APE SDV+S+G+V+ E ++ YG RP E+
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS------YGERPYWEM 231
Query: 388 NLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
+ +K + + R +D +AL + +L C + + RPK ++V ML
Sbjct: 232 TNQDVIKAVEEGYRLPSPMD-------CPAALYQLMLD---CWQKERNSRPKFDEIVNML 281
Query: 448 E 448
+
Sbjct: 282 D 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 88
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 144
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 145 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 198
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 258
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 259 ARDLISRLLKHNPSQRPMLREVL 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 193 VWSFGILLTEIVTHGRIP 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
+V EY+ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRE--CNRE----EVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 214 VWAFGVLLWEIAT 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G N T VAVK L PG + F E + ++H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
++ EY+ G+L +L+ D + G + + A+ +AY+ +H
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIH 133
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEK 358
RD++++N+L+ E+ KI+DFGLA+++ + T R F + APE N G K
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 359 SDVYSFGVVLLEAIT-GRYPVDYGRPQSEV 387
SDV+SFG++L E +T G+ P GR ++V
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYP-GRTNADV 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 193 VWAFGVLLWEIAT 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 79
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 136 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 189
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 249
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 250 ARDLISRLLKHNPSQRPMLREVL 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 177
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVRHKN 231
+ +IG G +G V G+L VA+K L G DK DF E +G H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ L G + +++ EY+ NG+L+ +LR + G T + +L G + YL
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEY 349
+ VHRD+ + NIL++ N K+SDFG++++L T G + APE
Sbjct: 128 DM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDP 408
SDV+S+G+V+ E ++ YG RP +++ + +K + + R +D
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYRLPPPMDC 238
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
I AL + +L C + RPK Q+V ML+
Sbjct: 239 PI-------ALHQLMLD---CWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVRHKN 231
+ +IG G +G V G+L VA+K L G DK DF E +G H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ L G + +++ EY+ NG+L+ +LR + G T + +L G + YL
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEY 349
+ VHRD+ + NIL++ N K+SDFG++++L T G + APE
Sbjct: 134 DM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSEDVVDP 408
SDV+S+G+V+ E ++ YG RP +++ + +K + + R +D
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
I AL + +L C + RPK Q+V ML+
Sbjct: 245 PI-------ALHQLMLD---CWQKERSDRPKFGQIVNMLD 274
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 61
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 117
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 118 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 171
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 231
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 232 ARDLISRLLKHNPSQRPMLREVL 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 73
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
R+++++NIL+ + KI+DFGLA+L+ + + APE N G KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E +T GR P
Sbjct: 189 VWSFGILLTEIVTHGRIP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 66
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 122
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 176
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 236
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 237 ARDLISRLLKHNPSQRPMLREVL 259
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTA------VAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N + VAVK L + A KDF+ E E + +++H+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLTWEARMKILLGT 283
G C +G I+V+EY+ +G+L ++LR D +G L + I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK-LLGAGKSHITTRVMGTF 342
A + YL VHRD+ + N L+ N KI DFG+++ + + M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR-PQSEVNLVEWLKMMVQLRR 401
++ PE +SDV+SFGV+L E T YG+ P +++ E ++ + Q R
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT------YGKQPWFQLSNTEVIECITQGRV 253
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLES 449
E RP K L C + +R + ++ ++L +
Sbjct: 254 LE---------RPRVCP-KEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + A S TT + GT Y
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT-LSGTLDY 173
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 233
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 288 EPPFYIITEFMTYGNLLDYLR--ECNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
R++ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 402 VWAFGVLLWEIAT 414
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 74
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 75 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------ 127
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 235
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 285 EPPFYIITEFMTYGNLLDYLR--ECNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
R++ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 399 VWAFGVLLWEIAT 411
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLR-----------GDMCDRGYLTWEARMKILLGTA 284
G C EG ++V+EY+ +G+L ++LR G+ G L + + A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK-LLGAGKSHITTRVMGTFG 343
+ YL VHRD+ + N L+ + KI DFG+++ + + R M
Sbjct: 169 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR-PQSEVNLVEWLKMMVQLRRS 402
++ PE +SDV+SFGVVL E T YG+ P +++ E + + Q R
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQLSNTEAIDCITQGREL 279
Query: 403 E 403
E
Sbjct: 280 E 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 75
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 236
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 237 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 76
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 237
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 238 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 234
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 235 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 77
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 78 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 130
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 238
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 239 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 74
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 75 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 127
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 235
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 327 EPPFYIITEFMTYGNLLDYLR--ECNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
R++ + N L+ EN K++DFGL++L+ + APE + KSD
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 361 VYSFGVVLLEAIT 373
V++FGV+L E T
Sbjct: 441 VWAFGVLLWEIAT 453
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLR-----------GDMCDRGYLTWEARMKILLGTA 284
G C EG ++V+EY+ +G+L ++LR G+ G L + + A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK-LLGAGKSHITTRVMGTFG 343
+ YL VHRD+ + N L+ + KI DFG+++ + + R M
Sbjct: 140 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR-PQSEVNLVEWLKMMVQLRRS 402
++ PE +SDV+SFGVVL E T YG+ P +++ E + + Q R
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQLSNTEAIDCITQGREL 250
Query: 403 E 403
E
Sbjct: 251 E 251
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLR-----------GDMCDRGYLTWEARMKILLGTA 284
G C EG ++V+EY+ +G+L ++LR G+ G L + + A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK-LLGAGKSHITTRVMGTFG 343
+ YL VHRD+ + N L+ + KI DFG+++ + + R M
Sbjct: 146 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYP 377
++ PE +SDV+SFGVVL E T G+ P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 59
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 115
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 116 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 169
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 229
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 230 ARDLISRLLKHNPSQRPMLREVL 252
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 38/285 (13%)
Query: 181 IIGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G +G + G + +K+L+ + + F EV+ + + H N+++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + + EY+ G L ++ D Y W R+ A +AYLH ++
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKS--MDSQY-PWSQRVSFAKDIASGMAYLHSM---NII 130
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT-------------TRVMGTFGYVA 346
HRD+ S N L+ EN + ++DFGLA+L+ K+ V+G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN-LVEWLKMMVQLRRSED- 404
PE N +EK DV+SFG+VL E I GR ++ + L + + +R D
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII--------GRVNADPDYLPRTMDFGLNVRGFLDR 242
Query: 405 VVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLES 449
PN PS + +RC D D +KRP ++ LE+
Sbjct: 243 YCPPNCP--PSFFPI------TVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 75
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 236
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 237 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 76
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 237
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 238 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 79
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 80 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 132
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 133 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 240
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 241 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 173
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 233
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 177
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 76
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 237
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 238 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 229
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 230 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 64
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI++FG + + A S TT + GT Y
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCGTLDY 174
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 234
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVL 257
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 98
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 99 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 151
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 152 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 259
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 260 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 80
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 241
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 242 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI++FG + + A S TT + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R EVE H+RH N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 78
Query: 237 GYCIEGTQRILVYEYVNNGN----LEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLH 291
GY + T+ L+ EY G L++ R D E R + A AL+Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFD---------EQRTATYITELANALSYCH 129
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAN 351
+V+HRDIK N+L+ N + KI+DFG + + A S TT + GT Y+ PE
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT-LCGTLDYLPPEMIE 183
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ +EK D++S GV+ E + G P +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDY 177
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S T + GT Y
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-LCGTLDY 173
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 233
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 14/210 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G N T VAVK L PG + F E + ++H LVRL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E++ G+L +L+ D + G + + A+ +AY+ +H
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEK 358
RD++++N+L+ E+ KI+DFGLA+++ + T R F + APE N G K
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 359 SDVYSFGVVLLEAIT-GRYPVDYGRPQSEV 387
S+V+SFG++L E +T G+ P GR ++V
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYP-GRTNADV 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 234
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T ++ +C D+D RPK +++
Sbjct: 235 GERLPQPPICTIDVYMIMR-------KCWMIDADSRPKFRELI 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + + A S TT + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDY 177
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS R +L
Sbjct: 238 ARDLISRLLKHNPSQRPXLREVL 260
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 245
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T ++ +C D+D RPK +++
Sbjct: 246 ERLPQPPICTIDVYMIMR-------KCWMIDADSRPKFRELI 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 76
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 237
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T ++ +C D+D RPK +++
Sbjct: 238 GERLPQPPICTIDVYMIMR-------KCWMIDADSRPKFRELI 273
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 88
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 144
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 145 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDY 198
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 258
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 259 ARDLISRLLKHNPSQRPMLREVL 281
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 64
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 174
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 234
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVL 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 17/262 (6%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNP----GQADKDFRVEVEAIG 225
Q A F +G G +G VY + N + K+L + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELAN 119
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL+Y H KV+HRDIK N+L+ + KI+DFG + S + GT Y+
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRRS 402
PE + +EK D++S GV+ E + G+ P + Y ++ VE+ +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 403 EDVVDPNIETRPSTSALKRALL 424
D++ ++ PS + R +L
Sbjct: 234 RDLISRLLKHNPSQRPMLREVL 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 70
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 71 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 123
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
A+ + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 124 AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 231
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 232 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 232
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+ +L +A+K+ E + V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 161
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 162 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 269
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 270 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G V G G VAVK + N+ + F E + +RH NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ +V EY+ G+L +LR R L + +K L +A+ YL VH
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N+L+ E+ AK+SDFGL K A + T ++ + APE + KSD
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E + GR P
Sbjct: 188 VWSFGILLWEIYSFGRVP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++ G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 80
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 241
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 242 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
F K ++ G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
AL+Y H +V+HRDIK N+L+ + KI+DFG + S + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDY 175
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD---YGRPQSEVNLVEWLKMMVQLRR 401
+ PE + +EK D++S GV+ E + G+ P + Y ++ VE+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 402 SEDVVDPNIETRPSTSALKRALL 424
+ D++ ++ PS + R +L
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVL 258
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 239
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 240 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 237
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 238 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++ G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 80
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA K +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 241
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 242 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G+G +G V+ G T VA+K L PG + + F E + + ++H LV+L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL--KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+ D R L + + A +AY+ +
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLK-DGEGRA-LKLPNLVDMAAQVAAGMAYIERM---NYI 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRD++S+NIL+ KI+DFGLA+L+ + + APE A G KS
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 360 DVYSFGVVLLEAIT-GRYP 377
DV+SFG++L E +T GR P
Sbjct: 188 DVWSFGILLTELVTKGRVP 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 235
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 236 ERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R EVE H+RH N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 78
Query: 237 GYCIEGTQRILVYEYVNNGN----LEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLH 291
GY + T+ L+ EY G L++ R D E R + A AL+Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFD---------EQRTATYITELANALSYCH 129
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAN 351
+V+HRDIK N+L+ N + KI+DFG + + A S T + GT Y+ PE
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT-LCGTLDYLPPEMIE 183
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ +EK D++S GV+ E + G P +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKL--LNNPGQADKDFRVEVEAIGH 226
F K ++G G +G VY+G + VA+K+L +P +A+K+ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-KANKEILDEAYVMAS 80
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGT 283
V + ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AK + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEK 241
Query: 402 SEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T + ++C D+D RPK +++
Sbjct: 242 GERLPQPPICT-------IDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G V G G VAVK + N+ + F E + +RH NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ +V EY+ G+L +LR R L + +K L +A+ YL VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N+L+ E+ AK+SDFGL K A + T ++ + APE + KSD
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L E + GR P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 154 EFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQA 213
EF GW +++L+ IG G +G V G G VAVK + N+
Sbjct: 182 EFYRSGWA--LNMKELKLL-------QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--AT 229
Query: 214 DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLT 272
+ F E + +RH NLV+LLG +E + +V EY+ G+L +LR R L
Sbjct: 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLG 287
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ +K L +A+ YL VHRD+ + N+L+ E+ AK+SDFGL K A +
Sbjct: 288 GDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASST 342
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYP 377
T ++ + APE + KSDV+SFG++L E + GR P
Sbjct: 343 QDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 154 EFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQA 213
EF GW +++L+ IG G +G V G G VAVK + N+
Sbjct: 10 EFYRSGWA--LNMKELKLLQT-------IGKGEFGDVMLGD-YRGNKVAVKCIKNDA--T 57
Query: 214 DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLT 272
+ F E + +RH NLV+LLG +E + +V EY+ G+L +LR R L
Sbjct: 58 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLG 115
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ +K L +A+ YL VHRD+ + N+L+ E+ AK+SDFGL K A +
Sbjct: 116 GDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASST 170
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYP 377
T ++ + APE + KSDV+SFG++L E + GR P
Sbjct: 171 QDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKK-----LLNNPGQADKDFRVEVEAIGHVRH 229
F + IG G + VYR L++G VA+KK L++ +A D E++ + + H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
N+++ IE + +V E + G+L + ++ + + K + AL +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
+H +V+HRDIK +N+ I K+ D GL + + K+ ++GT Y++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPER 207
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPN 409
+ N KSD++S G +L E + P YG ++NL K + E P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPF-YG---DKMNLYSLCK------KIEQCDYPP 257
Query: 410 IETRPSTSALKRALLTALRCVDPDSDKRPKMSQV 443
+ + + L++ + C++PD +KRP ++ V
Sbjct: 258 LPSDHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 237
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T ++ +C D+D RPK +++
Sbjct: 238 ERLPQPPICTIDVYMIMR-------KCWMIDADSRPKFRELI 272
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 37/275 (13%)
Query: 180 NIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLV 233
++G G +G VY+G + VA+K L G +A+ +F E + + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGYLTWEARMKILLGTAKALAYL 290
RLLG C+ T + LV + + +G L +++ + ++ + L W ++ AK + YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-GAGKSHITTRVMGTFGYVAPEY 349
E ++VHRD+ + N+L+ KI+DFGLA+LL G K + ++A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ +SDV+S+GV + E +T G P D G P E+ + L + E + P
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTREIPDL--------LEKGERLPQP 264
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQV 443
I T + ++C D+D RPK ++
Sbjct: 265 PICT-------IDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA K +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRS 402
++A E + +SDV+S+GV + E +T G P D G P SE++ + L +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSI--------LEKG 237
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
E + P I T ++ +C D+D RPK +++
Sbjct: 238 ERLPQPPICTIDVYMIMR-------KCWMIDADSRPKFRELI 272
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 37/275 (13%)
Query: 180 NIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLV 233
++G G +G VY+G + VA+K L G +A+ +F E + + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGYLTWEARMKILLGTAKALAYL 290
RLLG C+ T + LV + + +G L +++ + ++ + L W ++ AK + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-GAGKSHITTRVMGTFGYVAPEY 349
E ++VHRD+ + N+L+ KI+DFGLA+LL G K + ++A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ +SDV+S+GV + E +T G P D G P E+ + L + E + P
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-GIPTREIPDL--------LEKGERLPQP 241
Query: 409 NIETRPSTSALKRALLTALRCVDPDSDKRPKMSQV 443
I T + ++C D+D RPK ++
Sbjct: 242 PICT-------IDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 28/205 (13%)
Query: 185 GGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR--VEVEAIGHVRHKNLVRLLGYCIEG 242
G +G V++ QL+N VAVK P Q + ++ EV ++ ++H+N+++ +G G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 243 TQ----RILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI---- 294
T L+ + G+L +L+ ++ ++W I A+ LAYLHE I
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 295 ---EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR-VMGTFGYVAPEYA 350
+P + HRDIKS N+L+ N A I+DFGLA AGKS T +GT Y+APE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 351 NSGLLNEKS-----DVYSFGVVLLE 370
+ ++ D+Y+ G+VL E
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWE 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH +V+HRDIKS NIL+ + K++DFG + +S +T V GT ++
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWM 183
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE K D++S G++ +E I G P P + L+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----------- 232
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
P ++ SA+ R L RC+D D +KR
Sbjct: 233 -TPELQNPEKLSAIFRDFLN--RCLDMDVEKR 261
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
V+HRD+K +N+ +D + K+ DFGLA++L S T V GT Y++PE N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 355 LNEKSDVYSFGVVLLE 370
NEKSD++S G +L E
Sbjct: 193 YNEKSDIWSLGCLLYE 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK----KLLNNPGQADKDFRVEVEAIGHVRHK 230
F N++G G + VYR + + G VA+K K + G + + EV+ ++H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHP 71
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+++ L Y + LV E +NG + ++L+ + + + EAR + + YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEAR-HFMHQIITGMLYL 128
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEY 349
H ++HRD+ SN+L+ N + KI+DFGLA +L + H T + GT Y++PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
A +SDV+S G + + GR P D ++ +N V
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YANSGLLNE 357
+HRD+K N+LI+ + KI+DFGLA+ G T V+ T Y AP+ S +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 358 KSDVYSFGVVLLEAITG 374
D++S G + E + G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YANSGLLNE 357
+HRD+K N+LI+ + KI+DFGLA+ G T V+ T Y AP+ S +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 358 KSDVYSFGVVLLEAITG 374
D++S G + E + G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 51/284 (17%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHV 227
S++++F + +G+G Y VY+G G VA+K KL + G R E+ + +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKEL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNN-----------GNLEQWLRGDMCDRGYLTWEAR 276
+H+N+VRL + LV+E+++N GN + L ++ Y W+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK--YFQWQL- 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ LA+ HE K++HRD+K N+LI++ K+ DFGLA+ G + ++
Sbjct: 118 -------LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 337 RVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKM 395
V+ T Y AP+ S + D++S G +L E ITG+ P+ G E
Sbjct: 168 EVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEE--------- 216
Query: 396 MVQLRRSEDVV-DPNIETRPSTSALKRALLTALRCVDPDSDKRP 438
QL+ D++ PN PS + L + +P+ +RP
Sbjct: 217 --QLKLIFDIMGTPNESLWPSVTKLPK--------YNPNIQQRP 250
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 193
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YANSGLLNE 357
+HRD+K N+LI+ + KI+DFGLA+ G T ++ T Y AP+ S +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 358 KSDVYSFGVVLLEAITG 374
D++S G + E + G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 33/254 (12%)
Query: 144 TAPSP-LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM------ 196
TA +P L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 56 TADTPMLAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGCFGQVVMAEAVGIDKDK 109
Query: 197 --NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYV 252
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 253 NNGNLEQWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ GNL ++LR + +T++ + A+ + YL K +H
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 226
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSH-ITTRVMGTFGYVAPEYANSGLLNEKS 359
RD+ + N+L+ EN KI+DFGLA+ + + TT ++APE + +S
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 360 DVYSFGVVLLEAIT 373
DV+SFGV++ E T
Sbjct: 287 DVWSFGVLMWEIFT 300
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLT 190
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL- 327
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 328 GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN-PGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+ G+L + T VAVK P F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-V 298
+ +V E V G+ +LR + R+K LL A E +E K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT-FGYVAPEYANSGLLNE 357
+HRD+ + N L+ E KISDFG+++ G + + + APE N G +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 358 KSDVYSFGVVLLEAIT 373
+SDV+SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH +V+HRDIKS NIL+ + K++DFG + +S + ++GT ++
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWM 183
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE K D++S G++ +E I G P P + L+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---------- 233
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
P ++ SA+ R L RC+D D +KR
Sbjct: 234 --PELQNPEKLSAIFRDFLN--RCLDMDVEKR 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL- 327
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 328 GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQAD--KDFRVEVE 222
+ ++NI IG+G +G V++ + T VAVK +L AD DF+ E
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK-MLKEEASADMQADFQREAA 102
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR------------GDMCDRGY 270
+ + N+V+LLG C G L++EY+ G+L ++LR D+ R
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 271 --------LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
L+ ++ I A +AYL E K VHRD+ + N L+ EN KI+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 323 LAKLLGA-------GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR 375
L++ + + G I R M PE +SDV+++GVVL E +
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFSYG 273
Query: 376 YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSD 435
YG EV V D NI P L+ L L C
Sbjct: 274 LQPYYGMAHEEVIYY--------------VRDGNILACPENCPLELYNLMRL-CWSKLPA 318
Query: 436 KRPKMSQVVRMLE 448
RP + R+L+
Sbjct: 319 DRPSFCSIHRILQ 331
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 22/280 (7%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--NGTA--VAVKKL-LNNPGQAD-KDFRV 219
L D+ N I+G+G +G V G L +GT+ VAVK + L+N Q + ++F
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR-----ILVYEYVNNGNLEQWLRGDMCDRG--YLT 272
E + H N++RLLG CIE + + +++ ++ G+L +L + G ++
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ +K ++ A + YL +HRD+ + N ++ ++ ++DFGL+K + +G
Sbjct: 146 LQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 333 HITTRVMGT-FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVE 391
+ R+ ++A E + KSDV++FGV + E I R Y Q+ + +
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE-IATRGMTPYPGVQNH-EMYD 260
Query: 392 WLKMMVQLRRSEDVVDPNIETRPS---TSALKRALLTALR 428
+L +L++ ED +D E S T L R + LR
Sbjct: 261 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLR 300
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 193
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 194
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 189
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 195
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN-PGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+ G+L + T VAVK P F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-V 298
+ +V E V G+ +LR + R+K LL A E +E K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT-FGYVAPEYANSGLLNE 357
+HRD+ + N L+ E KISDFG+++ G + + + APE N G +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 358 KSDVYSFGVVLLEAIT 373
+SDV+SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 188
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 197
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 221
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
V+HRD+K +N+ +D + K+ DFGLA++L S V GT Y++PE N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMS 192
Query: 355 LNEKSDVYSFGVVLLE 370
NEKSD++S G +L E
Sbjct: 193 YNEKSDIWSLGCLLYE 208
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 196
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 190
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 20/237 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRG---QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRH 229
N D +G G +G V +G VA+K L +AD ++ E + + + +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+VRL+G C + +LV E G L ++L G R + ++L + + Y
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKY 125
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAP 347
L E VHRD+ + N+L+ AKISDFGL+K LGA S+ T R G + + AP
Sbjct: 126 LEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSE 403
E N + +SDV+S+GV + EA++ YG +P ++ E + + Q +R E
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS------YGQKPYKKMKGPEVMAFIEQGKRME 233
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 190
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ E++ G+L ++L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL------QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 193
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 208
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 141/277 (50%), Gaps = 41/277 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR---VMGTFGYVAPEY-----A 350
+HRD+K+ NIL + D K++DFG++ A + R +GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ K+DV+S G+ L+E + P E+N +++++++ +SE P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM------AEIEPPHHELNP---MRVLLKIAKSE----PPT 259
Query: 411 ETRPS--TSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+PS +S K L +C++ + D R SQ+++
Sbjct: 260 LAQPSRWSSNFKDFL---KKCLEKNVDARWTTSQLLQ 293
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 141/277 (50%), Gaps = 41/277 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR---VMGTFGYVAPEY-----A 350
+HRD+K+ NIL + D K++DFG++ A + R +GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ K+DV+S G+ L+E + P E+N +++++++ +SE P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM------AEIEPPHHELNP---MRVLLKIAKSE----PPT 259
Query: 411 ETRPS--TSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+PS +S K L +C++ + D R SQ+++
Sbjct: 260 LAQPSRWSSNFKDFL---KKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 141/277 (50%), Gaps = 41/277 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR---VMGTFGYVAPEY-----A 350
+HRD+K+ NIL + D K++DFG++ A + R +GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ K+DV+S G+ L+E + P E+N +++++++ +SE P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM------AEIEPPHHELNP---MRVLLKIAKSE----PPT 259
Query: 411 ETRPS--TSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+PS +S K L +C++ + D R SQ+++
Sbjct: 260 LAQPSRWSSNFKDFL---KKCLEKNVDARWTTSQLLQ 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HRD+ + NIL++ KI DFGL K+L K + G F Y APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLT 208
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
V+HRD+K +N+ +D + K+ DFGLA++L + +GT Y++PE N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNRMS 192
Query: 355 LNEKSDVYSFGVVLLE 370
NEKSD++S G +L E
Sbjct: 193 YNEKSDIWSLGCLLYE 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYAN 351
+ +HR++ + NIL++ KI DFGL K+L K + + G F Y APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLT 191
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ SDV+SFGVVL E T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSHI-TTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 20/237 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRG---QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRH 229
N D +G G +G V +G VA+K L +AD ++ E + + + +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+VRL+G C + +LV E G L ++L G R + ++L + + Y
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKY 451
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAP 347
L E VHR++ + N+L+ AKISDFGL+K LGA S+ T R G + + AP
Sbjct: 452 LEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRSE 403
E N + +SDV+S+GV + EA++ YG +P ++ E + + Q +R E
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALS------YGQKPYKKMKGPEVMAFIEQGKRME 559
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM-GTFGYVAPEYANSGLL 355
KV+HRDIK N+L+ + KI+DFG + + R M GT Y+ PE
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+EK D++ GV+ E + G P D
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 81
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 134
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM-GTFGYVAPEYANSGLL 355
KV+HRDIK N+L+ + KI+DFG + + R M GT Y+ PE
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+EK D++ GV+ E + G P D
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM-GTFGYVAPEYANSGLL 355
KV+HRDIK N+L+ + KI+DFG + + R M GT Y+ PE
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+EK D++ GV+ E + G P D
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 81 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD++++NIL+ + KI+DFGLA+++ + + APE N G KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 361 VYSFGVVLLEAIT-GRYP 377
V+SFG++L+E +T GR P
Sbjct: 195 VWSFGILLMEIVTYGRIP 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 29/280 (10%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 18 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 73
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQ 128
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH +V+HR+IKS NIL+ + K++DFG + +S +T V GT ++
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWM 184
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE K D++S G++ +E I G P P + L+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----------- 233
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
P ++ SA+ R L RC++ D +KR ++++
Sbjct: 234 -TPELQNPEKLSAIFRDFLN--RCLEMDVEKRGSAKELIQ 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVV-YRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAI 224
+D + IG GG+ V ++ G VA+K + N +D + E+EA+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
++RH+++ +L + +V EY G L ++ DR L+ E +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DR--LSEEETRVVFRQIV 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGL-AKLLGAGKSHITTRVMGTFG 343
A+AY+H HRD+K N+L DE K+ DFGL AK G H+ T G+
Sbjct: 119 SAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLA 174
Query: 344 YVAPEYAN-SGLLNEKSDVYSFGVVLLEAITGRYPVD 379
Y APE L ++DV+S G++L + G P D
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 29/280 (10%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 18 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 73
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQ 128
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH +V+HRDIKS NIL+ + K++DFG + +S + ++GT ++
Sbjct: 129 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWM 184
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE K D++S G++ +E I G P P + L+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----------- 233
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
P ++ SA+ R L RC++ D +KR ++++
Sbjct: 234 -TPELQNPEKLSAIFRDFLN--RCLEMDVEKRGSAKELIQ 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 78
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 79 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 98 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 149
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG--TFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KI+DFGLAKLL K + R G + APE + + + +SDV+SFGVVL E
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 371 AIT 373
T
Sbjct: 210 LFT 212
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 80
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 81 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 99 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 150
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG--TFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KI+DFGLAKLL K + R G + APE + + + +SDV+SFGVVL E
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 371 AIT 373
T
Sbjct: 211 LFT 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D R E++ + RH ++++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L + +V EYV+ G L ++ C G L + ++ + Y H +
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+ G+ Y APE + L
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPEVISGRL 191
Query: 355 L-NEKSDVYSFGVVLLEAITGRYPVD 379
+ D++S GV+L + G P D
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 83
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 84 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 236
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 276
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 8/199 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VAVK ++ ++ +F E + + + H LV+ G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
+V EY++NG L +LR +G L +++ + +A+L + +HR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSH--GKG-LEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDV 361
D+ + N L+D + K+SDFG+ + + + + + APE + + KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 362 YSFGVVLLEAIT-GRYPVD 379
++FG+++ E + G+ P D
Sbjct: 189 WAFGILMWEVFSLGKMPYD 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 181 IIGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G + V+ Q + G A+K + +P D E+ + ++H+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
T LV + V+ G L + +RG T + ++ A+ YLHE +V
Sbjct: 76 ESTTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIV 128
Query: 300 HRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
HRD+K N+L +EN I+DFGL+K+ G I + GT GYVAPE +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYS 185
Query: 357 EKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
+ D +S GV+ + G YP Y +S++
Sbjct: 186 KAVDCWSIGVITYILLCG-YPPFYEETESKL 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH +V+HRDIKS NIL+ + K++DFG + +S + ++GT ++
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWM 183
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE K D++S G++ +E I G P P + L+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----------- 232
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
P ++ SA+ R L RC++ D +KR
Sbjct: 233 -TPELQNPEKLSAIFRDFLN--RCLEMDVEKR 261
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 236
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 276
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 111 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 162
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYANSGLLNEKSDVYSFGVVLL 369
KI+DFGLAKLL K + R G F Y APE + + + +SDV+SFGVVL
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLY 221
Query: 370 EAIT 373
E T
Sbjct: 222 ELFT 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT--TRVMGTF 342
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + +T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ EY + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN +I+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGTF 342
+AL + H+ ++HRD+K +NILI K+ DFG+A+ + + + T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 180
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 233
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 273
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 177
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 230
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 254 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 307
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEK 358
RD++++NIL+ + KI+DFGLA+++ + T R F + APE N G K
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 359 SDVYSFGVVLLEAIT-GRYP 377
SDV+SFG++L+E +T GR P
Sbjct: 366 SDVWSFGILLMEIVTYGRIP 385
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 181 IIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH--VRHKNLVRLLGY 238
I G +G V++ QLMN VAVK P Q + ++ E E ++H+NL++ +
Sbjct: 22 IKARGRFGCVWKAQLMN-DFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 239 CIEGT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G+ + L+ + + G+L +L+G++ +TW + ++ L+YLHE +
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDV 132
Query: 295 --------EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR-VMGTFGYV 345
+P + HRD KS N+L+ + A ++DFGLA GK T +GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 346 APEYANSGLLNEKS-----DVYSFGVVLLEAIT----GRYPVD-YGRP-QSEVNL---VE 391
APE + ++ D+Y+ G+VL E ++ PVD Y P + E+ +E
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLE 252
Query: 392 WLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
L+ +V ++ + + P + L +T C D D++ R
Sbjct: 253 ELQEVVVHKKMRPTIKDHWLKHPGLAQL---CVTIEECWDHDAEAR 295
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 182 IGDGGYGVV-----YRGQLMNGTAVAVKKLLNNPGQADKDFRVE--VEAIGHVRHKNLVR 234
+G+G +G V Y+ Q ++LL ++D RVE + + +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLK---KSDMHMRVEREISYLKLLRHPHIIK 73
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T ++V EY G L ++ ++ +T + + A+ Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAG-GELFDYI----VEKKRMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
K+VHRD+K N+L+D+N + KI+DFGL+ ++ G T+ G+ Y APE N L
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVINGKL 183
Query: 355 L-NEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S G+VL + GR P D
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+V+ +L+ ++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT--TRVMGTF 342
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + +T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 27/233 (11%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG---------AG 330
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++ G
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 331 KSHITTRVMGTFGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
+ T + T Y APE S + DV+S G +L E R P+ GR
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAI---GH 226
N ++IG+G +G V + ++ A+K++ + D +DF E+E + GH
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC---DRGY---------LTWE 274
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 85 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ A+ + YL + + +HRD+ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 143 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 195
Query: 335 TTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEW 392
+ MG ++A E N + SDV+S+GV+L E ++ G P + E
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 250
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV----RMLE 448
+ + Q R E ++ + E L R +C +RP +Q++ RMLE
Sbjct: 251 YEKLPQGYRLEKPLNCDDEVYD----LMR------QCWREKPYERPSFAQILVSLNRMLE 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAI---GH 226
N ++IG+G +G V + ++ A+K++ + D +DF E+E + GH
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC---DRGY---------LTWE 274
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 75 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ A+ + YL + + +HRD+ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 133 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 185
Query: 335 TTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEW 392
+ MG ++A E N + SDV+S+GV+L E ++ G P + E
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 240
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV----RMLE 448
+ + Q R E ++ + E L R +C +RP +Q++ RMLE
Sbjct: 241 YEKLPQGYRLEKPLNCDDEVYD----LMR------QCWREKPYERPSFAQILVSLNRMLE 290
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 27/233 (11%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG---------AG 330
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++ G
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 331 KSHITTRVMGTFGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
+ T + T Y APE S + DV+S G +L E R P+ GR
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 45/292 (15%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARM--KILLGT 283
++ LLG C + ++ EY + GNL ++L+ + C E ++ K L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 284 AKALAYLHEAI-EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
A +A E + K +HRD+ + N+L+ E+ KI+DFGLA+ + HI T
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTN 196
Query: 343 G-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMV 397
G ++APE + +SDV+SFGV+L E T G P V + E K++
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFKLLK 251
Query: 398 QLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
+ R + +PS L +R C +RP Q+V L+
Sbjct: 252 EGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 145/339 (42%), Gaps = 57/339 (16%)
Query: 138 PSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN 197
P++ L L+G+ E+ W RD R +G+G +G V + +
Sbjct: 39 PTTENLYFQGMLAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIG 92
Query: 198 --------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRIL 247
T VAVK L ++ + D D E+E + + +HKN++ LLG C + +
Sbjct: 93 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152
Query: 248 VYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKILLGTAKALAYLHEAIE 295
+ EY + GNL ++L R + Y L+ + + A+ + YL
Sbjct: 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-- 210
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG-----YVAPEYA 350
K +HRD+ + N+L+ E+ KI+DFGLA+ + HI T G ++APE
Sbjct: 211 -KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEAL 265
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNI 410
+ +SDV+SFGV+L E T G P V + E K++ + R +
Sbjct: 266 FDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFKLLKEGHRMD------- 313
Query: 411 ETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
+PS L +R C +RP Q+V L+
Sbjct: 314 --KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 45/292 (15%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARM--KILLGT 283
++ LLG C + ++ EY + GNL ++L+ + C E ++ K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 284 AKALAYLHEAI-EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
A +A E + K +HRD+ + N+L+ E+ KI+DFGLA+ + HI T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTN 211
Query: 343 G-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMV 397
G ++APE + +SDV+SFGV+L E T G P V + E K++
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFKLLK 266
Query: 398 QLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
+ R + +PS L +R C +RP Q+V L+
Sbjct: 267 EGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 55/319 (17%)
Query: 165 TLRDLQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQA 213
+ L+ F + N++ G+G +G V + + T VAVK L N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 214 D-KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG--------- 263
+ +D E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 264 -----------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDE 312
D D LT + ++ + YL E K+VHRD+ + NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KISDFGL++ + S++ R G ++A E + +SDV+SFGV+L E
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 371 AIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRC 429
+T G P P+ NL LK ++ R ++ + + R + L+C
Sbjct: 245 IVTLGGNPYPGIPPERLFNL---LKTGHRMERPDNC----------SEEMYRLM---LQC 288
Query: 430 VDPDSDKRPKMSQVVRMLE 448
+ DKRP + + + LE
Sbjct: 289 WKQEPDKRPVFADISKDLE 307
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G YG V+ G+ G VAVK +A E+ +RH+N++ + I+
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 242 GT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI--- 294
GT Q L+ +Y NG+L +L+ D ++ +K+ + L +LH I
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDA-----KSMLKLAYSSVSGLCHLHTEIFST 157
Query: 295 --EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI----TTRVMGTFGYVAPE 348
+P + HRD+KS NIL+ +N I+D GLA + + + TRV GT Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE 216
Query: 349 YANSGLLNEK------SDVYSFGVVLLEA 371
+ L +D+YSFG++L E
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ Y + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 28/236 (11%)
Query: 179 DNIIGDGGYGVVYRG----QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
D +IG G +GVVY G Q N A+K L + Q + R + G + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPNV 84
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+ L+G + EG +L+ Y+ +G+L Q++R + T + + L A+ + YL
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP---TVKDLISFGLQVARGMEYL 140
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-----GAGKSHITTRVMGTFGYV 345
E K VHRD+ + N ++DE+F K++DFGLA+ + + + H R+ +
Sbjct: 141 AEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWT 195
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRR 401
A E + KSDV+SFGV+L E +T P P ++ + + Q RR
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP-----PYRHIDPFDLTHFLAQGRR 246
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+V+ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 232
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 128
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 239
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+ L Q L+ D D LT I L + LA
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLK-DFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ H +V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 349 -YANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
+ D++S G + E +T R +P D SE++ + ++ L ++V
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEV 226
Query: 406 VDPNIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
V P + + P S K A + V P D D R +SQ++
Sbjct: 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + AG M ++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 284
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG--YCIEGTQRILVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G Y + LV EY+ +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 95 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 146
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG--TFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KI+DFGLAKLL K R G + APE + + + +SDV+SFGVVL E
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 206
Query: 371 AIT 373
T
Sbjct: 207 LFT 209
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 153 PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQ 212
P + LG+G W ++ F K+ +G G +GVV G+ VA+K ++
Sbjct: 9 PSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 213 ADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT 272
++ +F E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHR---- 116
Query: 273 WEARMKILLGTAKALAYLHEAIEPK-VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ + LL K + E +E K +HRD+ + N L+++ K+SDFGL++ +
Sbjct: 117 --FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LD 172
Query: 332 SHITTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVD 379
T+ V F + PE + KSD+++FGV++ E + G+ P +
Sbjct: 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 153 PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQ 212
P + LG+G W ++ F K+ +G G +GVV G+ VA+K ++
Sbjct: 9 PSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 213 ADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT 272
++ +F E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHR---- 116
Query: 273 WEARMKILLGTAKALAYLHEAIEPK-VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ + LL K + E +E K +HRD+ + N L+++ K+SDFGL++ + +
Sbjct: 117 --FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 332 SHITTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVD 379
T+ V F + PE + KSD+++FGV++ E + G+ P +
Sbjct: 175 E--TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 180 NIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D + E++ + RH ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +V EYV+ G L ++ C G + ++ A+ Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+ T+ G+ Y APE + L
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRL 186
Query: 355 L-NEKSDVYSFGVVLLEAITGRYPVD 379
+ D++S GV+L + G P D
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 197
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 252
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 253 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG VY+ G VA+K++ P ++D ++ E+ + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ T +V EY G++ +R LT + IL T K L YLH + +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLHFM---RKI 147
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
HRDIK+ NIL++ AK++DFG+A L + V+GT ++APE N +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 360 DVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
D++S G+ +E G+ P P + ++
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 201
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 256
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 257 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 200
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 255
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 256 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEV 221
F +D + +G+G +G V + + VAVK L ++ + D D E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 222 EAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDR 268
E + + +HKN++ LLG C + ++ Y + GNL ++LR +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+T++ + A+ + YL K +HRD+ + N+L+ EN KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 329 AGKSH-ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ TT ++APE + +SDV+SFGV++ E T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 69
Query: 228 RHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 125
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT--TRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + +T V+GT
Sbjct: 126 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A + +
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 295 EP-KVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVAPEY 349
E +HRDI + N L+ AKI DFG+A+ + AG M ++ PE
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 234
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRY 376
G+ K+D +SFGV+L E + Y
Sbjct: 235 FMEGIFTSKTDTWSFGVLLWEIFSLGY 261
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 232
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 231
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 232
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 231
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 263
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 264 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 231
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 125
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 230
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 230
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 180
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 233
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 273
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 93
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 204
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 85
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 196
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
+ +SD++S G+ L+E GRYP+ G
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 66
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 69
Query: 228 RHKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 125
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT--TRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + +T V+GT
Sbjct: 126 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 142/278 (51%), Gaps = 39/278 (14%)
Query: 181 IIGD-GGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-G 237
IIG+ G +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 238 YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEP 296
+ E IL+ E+ G ++ M + E++++++ T AL YLH+
Sbjct: 76 FYYENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN--- 127
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR--VMGTFGYVAPEYANSGL 354
K++HRD+K+ NIL + D K++DFG++ ++ I R +GT ++APE
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 355 -----LNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPN 409
+ K+DV+S G+ L+E + P E+N +++++++ +SE P
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM------AEIEPPHHELNP---MRVLLKIAKSE----PP 232
Query: 410 IETRPS--TSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+PS +S K L +C++ + D R SQ+++
Sbjct: 233 TLAQPSRWSSNFKDFL---KKCLEKNVDARWTTSQLLQ 267
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG---------AG 330
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++ G
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 331 KSHITTRVMGTFGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
+ + T Y APE S + DV+S G +L E R P+ GR
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGR 226
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 55/319 (17%)
Query: 165 TLRDLQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQA 213
+ L+ F + N++ G+G +G V + + T VAVK L N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 214 D-KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG--------- 263
+ +D E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 264 -----------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDE 312
D D LT + ++ + YL E K+VHRD+ + NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KISDFGL++ + S + R G ++A E + +SDV+SFGV+L E
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 371 AIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRC 429
+T G P P+ NL LK ++ R ++ + + R + L+C
Sbjct: 245 IVTLGGNPYPGIPPERLFNL---LKTGHRMERPDN----------CSEEMYRLM---LQC 288
Query: 430 VDPDSDKRPKMSQVVRMLE 448
+ DKRP + + + LE
Sbjct: 289 WKQEPDKRPVFADISKDLE 307
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 230
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 66
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 169 LQSATNRFSKDNI-----IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADK 215
LQS T + ++ +GDG +GVV RG+ +VAVK L L+ P +A
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-EAMD 66
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF EV A+ + H+NL+RL G + + +V E G+L LR +G+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGT 122
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + A+ + YL + +HRD+ + N+L+ KI DFGL + L H
Sbjct: 123 LSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 336 TRVMGT--FGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ F + APE + + SD + FGV L E T
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+ K+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 229
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+ K+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G T V+ T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 228
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 66
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 129/295 (43%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------DMCDRGYLTWEARMKI 279
++ LLG C + ++ EY + GNL ++L+ L+ + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKK 208
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 263
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 264 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 24/240 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L L+ F ++G+G YG VY+G+ + +A K+++ G +++ + E+ +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 226 -HVRHKNLVRLLGYCIEGT------QRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEA 275
+ H+N+ G I+ Q LV E+ G++ ++ G+ ++ +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
R +IL G L++LH+ KV+HRDIK N+L+ EN + K+ DFG++ L
Sbjct: 136 R-EILRG----LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187
Query: 336 TRVMGTFGYVAPEYANS-----GLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
T +GT ++APE + KSD++S G+ +E G P+ P + L+
Sbjct: 188 T-FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 169 LQSATNRFSKDNI-----IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADK 215
LQS T + ++ +GDG +GVV RG+ +VAVK L L+ P +A
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-EAMD 66
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF EV A+ + H+NL+RL G + + +V E G+L LR +G+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGT 122
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + A+ + YL + +HRD+ + N+L+ KI DFGL + L H
Sbjct: 123 LSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 336 TRVMGT--FGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ F + APE + + SD + FGV L E T
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 182 IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT--FGYVAPEYAN 351
+ +HRD+ + N+L+ KI DFGL + L H + F + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ + SD + FGV L E T
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 38/219 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + +IG GG+G V++ + ++G +K++ N +A++ EV+A+ + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 235 LLGYCIEG----------------TQRILV-YEYVNNGNLEQWL---RGDMCDRGYLTWE 274
G C +G T+ + + E+ + G LEQW+ RG+ D+ L E
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK-VLALE 126
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGL-AKLLGAGKSH 333
+I K + Y+H K+++RD+K SNI + + KI DFGL L GK
Sbjct: 127 LFEQI----TKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR- 178
Query: 334 ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
R GT Y++PE +S ++ D+Y+ G++L E +
Sbjct: 179 --XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG-------AGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---- 197
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 182 IGDGGYGVVYRGQLMN--------GTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L+ + Y L+ + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+ + HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 340 GTFG-----YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLK 394
T G ++APE + +SDV+SFGV+L E T G P V + E K
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-----GSPYPGVPVEELFK 263
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALR-CVDPDSDKRPKMSQVVRMLE 448
++ + R + +PS L +R C +RP Q+V L+
Sbjct: 264 LLKEGHRMD---------KPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L+ ++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 232
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 54/307 (17%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRV------EVEA 223
+ ++ ++G+G YG+V + + + G VA+KK L ++D D V E++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL----ESDDDKMVKKIAMREIKL 77
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNN---GNLEQWLRGDMCDRGYLTWEARMKIL 280
+ +RH+NLV LL C + + LV+E+V++ +LE + G L ++ K L
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-------LDYQVVQKYL 130
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ + H ++HRDIK NIL+ ++ K+ DFG A+ L A + +
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVA 186
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE + K+ DV++ G ++ E G +P D S+++ + + M +
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD-----SDIDQLYHIMMCL 241
Query: 398 --QLRRSEDVVD----------PNIETR-------PSTSALKRALLTALRCVDPDSDKRP 438
+ R +++ + P I+ R P S + L A +C+ D DKRP
Sbjct: 242 GNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDL--AKKCLHIDPDKRP 299
Query: 439 KMSQVVR 445
++++
Sbjct: 300 FCAELLH 306
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG-------AGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---- 194
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 195 --WMAPESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG-------AGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---- 197
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAI---GH 226
N ++IG+G +G V + ++ A+K++ + D +DF E+E + GH
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC---DRGY---------LTWE 274
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 82 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ A+ + YL + + +HR++ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 140 QLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVY 192
Query: 335 TTRVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEW 392
+ MG ++A E N + SDV+S+GV+L E ++ G P + E
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-----GTPYCGMTCAEL 247
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV----RMLE 448
+ + Q R E ++ + E L R +C +RP +Q++ RMLE
Sbjct: 248 YEKLPQGYRLEKPLNCDDEVYD----LMR------QCWREKPYERPSFAQILVSLNRMLE 297
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 31/283 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+++ D D LT I L + LA
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ H +V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 349 -YANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
+ D++S G + E +T R +P D SE++ + ++ L ++V
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEV 229
Query: 406 VDPNIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
V P + + P S K A + V P D D R +SQ++
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 248 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 301
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEK 358
RD++++NIL+ + KI+DFGLA RV F + APE N G K
Sbjct: 302 RDLRAANILVSASLVCKIADFGLA------------RVGAKFPIKWTAPEAINFGSFTIK 349
Query: 359 SDVYSFGVVLLEAIT-GRYP 377
SDV+SFG++L+E +T GR P
Sbjct: 350 SDVWSFGILLMEIVTYGRIP 369
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 66
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 66
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQG 177
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPV 378
+ +SD++S G+ L+E GRYP+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R+++ IG+G YG+V + T VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHEN 102
Query: 232 LVR----LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ L +E + + + + + +L + L+ ++ + L + L
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+LI+ D KI DFGLA++ H T + T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 182 IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT--FGYVAPEYAN 351
+ +HRD+ + N+L+ KI DFGL + L H + F + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ + SD + FGV L E T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 51/232 (21%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + +IG GG+G V++ + ++G ++++ N +A++ EV+A+ + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 235 LLGYCIEG-----------------------------TQRILV-YEYVNNGNLEQWL--- 261
G C +G T+ + + E+ + G LEQW+
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 262 RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDF 321
RG+ D+ L E +I K + Y+H K++HRD+K SNI + + KI DF
Sbjct: 129 RGEKLDK-VLALELFEQI----TKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 322 GL-AKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
GL L GK TR GT Y++PE +S ++ D+Y+ G++L E +
Sbjct: 181 GLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 182 IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT--FGYVAPEYAN 351
+ +HRD+ + N+L+ KI DFGL + L H + F + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ + SD + FGV L E T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 31/283 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+++ D D LT I L + LA
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ H +V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 349 -YANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
+ D++S G + E +T R +P D SE++ + ++ L ++V
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEV 228
Query: 406 VDPNIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
V P + + P S K A + V P D D R +SQ++
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K + IG G +G VY+G + N T VA+K + L +D + E+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
R G ++ T+ ++ EY+ G+ L+ + Y+ IL K L YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHS 134
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ +HRDIK++N+L+ E D K++DFG+A L + +GT ++APE
Sbjct: 135 E---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 190
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
+ K+D++S G+ +E G P
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 232
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
+V+HRD+K N+LI+ K++DFGLA+ G V+ T Y APE
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
+ D++S G + E +T R +P D SE++ + ++ L ++VV P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEID--QLFRIFRTLGTPDEVVWP 230
Query: 409 NIETRP--STSALKRALLTALRCVDP-DSDKRPKMSQVVR 445
+ + P S K A + V P D D R +SQ++
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 180 NIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D + E++ + RH ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +V EYV+ G L ++ C G + ++ A+ Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+ G+ Y APE + L
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNYAAPEVISGRL 186
Query: 355 L-NEKSDVYSFGVVLLEAITGRYPVD 379
+ D++S GV+L + G P D
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 182 IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT--FGYVAPEYAN 351
+ +HRD+ + N+L+ KI DFGL + L H + F + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ + SD + FGV L E T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 182 IGDGGYGVVYRGQL----MNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT--FGYVAPEYAN 351
+ +HRD+ + N+L+ KI DFGL + L H + F + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 352 SGLLNEKSDVYSFGVVLLEAIT 373
+ + SD + FGV L E T
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------GAGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR---- 197
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------GAGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---- 197
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 86
Query: 228 RHKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT--TRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + +T V+GT
Sbjct: 143 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQS 385
Y++PE A ++ +SDVYS G VL E +TG P P S
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 164 FTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK- 215
F + + A + + +G G +G+VY G + G T VA+K + ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLT 272
+F E + ++VRLLG +G +++ E + G+L+ +LR +M + L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 273 WEARMKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-- 327
+ K++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 328 -----GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 182 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 69
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ K++HRD+K SNIL++ + K+ DFG++ G + +GT Y++PE
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEMANEFVGTRSYMSPERLQG 180
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
+ +SD++S G+ L+E GRYP
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNG-----TAVAVKKLLNNPG-QADKDFRVEVEAIGHVRH 229
K ++G G +G VY+G + VA+K L N +A+K+ E + V
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+ RLLG C+ T + LV + + G L +R + RG L + + + AK ++Y
Sbjct: 79 PYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVREN---RGRLGSQDLLNWCMQIAKGMSY 134
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT---RVMGTFGYVA 346
L + ++VHRD+ + N+L+ KI+DFGLA+LL ++ +V ++A
Sbjct: 135 LEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMA 189
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
E +SDV+S+GV + E +T G P D G P E+ + L + E +
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPAREIPDL--------LEKGERL 240
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
P I T + ++C DS+ RP+ ++V
Sbjct: 241 PQPPICT-------IDVYMIMVKCWMIDSECRPRFRELV 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG------- 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 182 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------GAGKSHITTRVMGT 341
YL+ K VHRD+ + N ++ +F KI DFG+ + + GK + R
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---- 196
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 197 --WMAPESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 270
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 158 LGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF 217
LG+G W ++ F K+ +G G +GVV G+ VA+K ++ ++ +F
Sbjct: 5 LGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF 57
Query: 218 RVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHR------FQT 110
Query: 278 KILLGTAKALAYLHEAIEPK-VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ LL K + E +E K +HRD+ + N L+++ K+SDFGL++ + T+
Sbjct: 111 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTS 168
Query: 337 RVMGTFG--YVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVD 379
V F + PE + KSD+++FGV++ E + G+ P +
Sbjct: 169 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++G++ ++ EY+ G+ LR D + +L K L YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHS 138
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
K +HRDIK++N+L+ E D K++DFG+A L + T V GT ++APE
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQ 194
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
+ K+D++S G+ +E G P
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F + + +G G GVV + Q + +KL++ P ++ R E++ + +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 76
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ + + E K+ + + LAYL E
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+ +++HRD+K SNIL++ + K+ DFG++ G + +GT Y+APE
Sbjct: 133 --KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQG 187
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVD----------YGRP 383
+ +SD++S G+ L+E GRYP+ +GRP
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRP 228
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A + +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 295 EP-KVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVAPEY 349
E +HRDI + N L+ AKI DFG+A+ + A M ++ PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRY 376
G+ K+D +SFGV+L E + Y
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG------- 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 191 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR M + L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------G 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 197 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------G 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 197 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 431
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 486
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 182 IGDGGYGVV----YRGQLMN-GTAVAVKKLL-NNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y + N G VAVK L + G D + E+E + ++ H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 236 LGYCIE--GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C E G L+ E++ +G+L+++L + + + + ++K + K + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT---RVMGTFGYVAPEYA 350
+ VHRD+ + N+L++ KI DFGL K + K T R F Y APE
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 250
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
+G G YG V+RG L +G +VAVK + Q+ FR E+ +RH N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSW--FRETEIYNTVLLRHDNILGFIASDM 72
Query: 241 ----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI-- 294
TQ L+ Y +G+L D R L +++ + A LA+LH I
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLY-----DFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 295 ---EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI----TTRVMGTFGYVAP 347
+P + HRD KS N+L+ N I+D GLA + G ++ RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 348 EYANSGLLNEK------SDVYSFGVVLLE 370
E + + + +D+++FG+VL E
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 244
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 243
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 432
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 487
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRV 219
+ + A + + +G G +G+VY G + G T VA+K + ++ +F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEAR 276
E + ++VRLLG +G +++ E + G+L+ +LR +M + L +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 277 MKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL------ 327
K++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 328 -GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 182 RKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------G 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 190 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 55/319 (17%)
Query: 165 TLRDLQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQA 213
+ L+ F + N++ G+G +G V + + T VAVK L N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 214 D-KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG--------- 263
+ +D E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 264 -----------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDE 312
D D LT + ++ + YL E +VHRD+ + NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAE 185
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEYANSGLLNEKSDVYSFGVVLLE 370
KISDFGL++ + S + R G ++A E + +SDV+SFGV+L E
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 371 AIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRC 429
+T G P P+ NL LK ++ R ++ + + R + L+C
Sbjct: 245 IVTLGGNPYPGIPPERLFNL---LKTGHRMERPDNC----------SEEMYRLM---LQC 288
Query: 430 VDPDSDKRPKMSQVVRMLE 448
+ DKRP + + + LE
Sbjct: 289 WKQEPDKRPVFADISKDLE 307
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A + +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 295 EP-KVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVAPEY 349
E +HRDI + N L+ AKI DFG+A+ + A M ++ PE
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 208
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRY 376
G+ K+D +SFGV+L E + Y
Sbjct: 209 FMEGIFTSKTDTWSFGVLLWEIFSLGY 235
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 169 LQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIG 225
Q ++ K +G+G YGVVY+ + G VA+K++ + G R E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTA 284
+ H N+V L+ LV+E+ +E+ L+ + + ++++KI L
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ +A+ H+ +++HRD+K N+LI+ + K++DFGLA+ G T V+ T Y
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWY 185
Query: 345 VAPE-YANSGLLNEKSDVYSFGVVLLEAITGR 375
AP+ S + D++S G + E ITG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 169 LQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIG 225
Q ++ K +G+G YGVVY+ + G VA+K++ + G R E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTA 284
+ H N+V L+ LV+E+ +E+ L+ + + ++++KI L
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ +A+ H+ +++HRD+K N+LI+ + K++DFGLA+ G T V+ T Y
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWY 185
Query: 345 VAPE-YANSGLLNEKSDVYSFGVVLLEAITGR 375
AP+ S + D++S G + E ITG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRV 219
+ + A + + +G G +G+VY G + G T VA+K + ++ +F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEAR 276
E + ++VRLLG +G +++ E + G+L+ +LR M + L +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 277 MKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL------ 327
K++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 328 -GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 185 RKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 182 IGDGGYGVV----YRGQLMN-GTAVAVKKLL-NNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y + N G VAVK L + G D + E+E + ++ H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 236 LGYCIE--GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C E G L+ E++ +G+L+++L + + + + ++K + K + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT---RVMGTFGYVAPEYA 350
+ VHRD+ + N+L++ KI DFGL K + K T R F Y APE
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRV 219
+ + A + + +G G +G+VY G + G T VA+K + ++ +F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEAR 276
E + ++VRLLG +G +++ E + G+L+ +LR +M + L +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 277 MKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL------ 327
K++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 328 -GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 189 RKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------G 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 190 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 144
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 144
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 87
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 142
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 182 IGDGGYGVVYRGQLM------NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK-LLGAGKSHITTRVMGTFGYVA 346
E +HRDI + N L+ AKI DFG+A+ + A M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRY 376
PE G+ K+D +SFGV+L E + Y
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 50 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 103
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI---TTRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 275
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 311
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ EY+ NG L +LR +M R + + LL K + E +E K +H
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLH 127
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEK 358
RD+ + N L+++ K+SDFGL++ + T+ V F + PE + K
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 359 SDVYSFGVVLLEAIT-GRYPVD 379
SD+++FGV++ E + G+ P +
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEA 223
D Q + IG G + V + ++ G VAVK K NP K FR EV
Sbjct: 9 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRI 67
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILL 281
+ + H N+V+L LV EY + G + +L G M ++ EAR K
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FR 121
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G T G+
Sbjct: 122 QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGS 176
Query: 342 FGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
Y APE + + DV+S GV+L ++G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 31/258 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+GDG +G VY+ + A+A K++ + + +D+ VE+E + H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E+ G ++ + DRG LT + +AL +LH +++H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLE--LDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 301 RDIKSSNILIDENFDAKISDFGLA----KLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
RD+K+ N+L+ D +++DFG++ K L S I GT ++APE +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 195
Query: 357 E-----KSDVYSFGVVLLEAITGRYPVDYGRPQSEV---------NLVEWLKMMVQLRRS 402
+ K+D++S G+ L+E P P + L+ K V+ R
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 255
Query: 403 EDV-VDPNIETRPSTSAL 419
+ +D N ETRPS + L
Sbjct: 256 LKIALDKNPETRPSAAQL 273
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 79
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 135 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 65
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT---TRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 237
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 238 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 273
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------G 328
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ + +
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 329 AGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 219 GGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 31/258 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+GDG +G VY+ + A+A K++ + + +D+ VE+E + H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E+ G ++ + DRG LT + +AL +LH +++H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLE--LDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLA----KLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
RD+K+ N+L+ D +++DFG++ K L S I GT ++APE +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 187
Query: 357 E-----KSDVYSFGVVLLEAITGRYPVDYGRPQSEV---------NLVEWLKMMVQLRRS 402
+ K+D++S G+ L+E P P + L+ K V+ R
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 247
Query: 403 EDV-VDPNIETRPSTSAL 419
+ +D N ETRPS + L
Sbjct: 248 LKIALDKNPETRPSAAQL 265
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 64
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT---TRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 236
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 182 IGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G GG+G V R + G VA+K+ +++ + +E++ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 81
Query: 240 IEGTQRI-------LVYEYVNNGNLEQWLRG--DMCDRGYLTWEARMKILLG-TAKALAY 289
+G Q++ L EY G+L ++L + C E ++ LL + AL Y
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK----EGPIRTLLSDISSALRY 137
Query: 290 LHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
LHE +++HRD+K NI++ + KI D G AK L G+ + T +GT Y+A
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLA 192
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE D +SFG + E ITG P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------GAGKSHITTRVMGT 341
YL+ K VHR++ + N ++ +F KI DFG+ + + GK + R
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---- 197
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G G V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFGYVAPEYANSGLLN-E 357
HRDIK N+L+DE + KISDFGLA + + + ++ GT YVAPE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 358 KSDVYSFGVVLLEAITGRYPVD 379
DV+S G+VL + G P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 41/253 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVR 234
++ +IG+G +GVV++ +L+ VA+KK+L DK F+ E++ + V+H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL------G 282
L + + LV EYV E R R Y + M +LL
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRA---SRHYAKLKQTMPMLLIKLYMYQ 149
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGT 341
++LAY+H + HRDIK N+L+D K+ DFG AK+L AG+ +++ + +
Sbjct: 150 LLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICS 204
Query: 342 FGYVAPEYANSGLLNEKS--DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
Y APE G N + D++S G V+ E + G+ +P + G Q LVE +K++
Sbjct: 205 RYYRAPELI-FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ----LVEIIKVLG 259
Query: 398 QLRRSE-DVVDPN 409
R + ++PN
Sbjct: 260 TPSREQIKTMNPN 272
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 73
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 128
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 37 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 90
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT---TRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 262
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 298
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 14 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 67
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT---TRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 239
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 240 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 275
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL-------GAGKSHITTRVMGT 341
YL+ K VHR++ + N ++ +F KI DFG+ + + GK + R
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---- 198
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++APE G+ SD++SFGVVL E
Sbjct: 199 --WMAPESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 69
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 125 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEV 387
N + KSDV+SFGV++ EA + G+ P G SEV
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR-GMKGSEV 219
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 182 IGDGGYGVVY--RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH----------VRH 229
+G G +G V+ R + NG A+K L K+ V ++ + H V H
Sbjct: 14 LGTGSFGRVHLIRSR-HNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
++R+ G + Q ++ +Y+ G L LR + ++ L AL Y
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL----ALEY 121
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
LH +++RD+K NIL+D+N KI+DFG AK + +T + GT Y+APE
Sbjct: 122 LHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV 174
Query: 350 ANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
++ N+ D +SFG+++ E + G P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 182 IGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G GG+G V R + G VA+K+ +++ + +E++ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 80
Query: 240 IEGTQRI-------LVYEYVNNGNLEQWLRG--DMCDRGYLTWEARMKILLG-TAKALAY 289
+G Q++ L EY G+L ++L + C E ++ LL + AL Y
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK----EGPIRTLLSDISSALRY 136
Query: 290 LHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
LHE +++HRD+K NI++ + KI D G AK L G+ + T +GT Y+A
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLA 191
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE D +SFG + E ITG P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ EY+ NG L +LR +M R + + LL K + E +E K +H
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLH 123
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEK 358
RD+ + N L+++ K+SDFGL++ + T+ V F + PE + K
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 359 SDVYSFGVVLLEAIT-GRYPVD 379
SD+++FGV++ E + G+ P +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G + + APE
Sbjct: 123 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEV 387
N + KSDV+SFGV++ EA + G+ P G SEV
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR-GMKGSEV 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ EY+ NG L +LR +M R + + LL K + E +E K +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG--YVAPEYANSGLLNEK 358
RD+ + N L+++ K+SDFGL++ + T+ V F + PE + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 359 SDVYSFGVVLLEAIT-GRYPVD 379
SD+++FGV++ E + G+ P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 70
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT---TRVMGTFGYV 345
I +P + HRD+KS NIL+ +N I+D GLA + I +GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 346 APEYANSGL------LNEKSDVYSFGVVLLEAITGRYPV-----DYGRPQSEVNLVEWLK 394
APE + + +++D+Y+ G+V E I R + DY P +LV
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPY--YDLVPSDP 242
Query: 395 MMVQLRR--SEDVVDPNIETRPSTSALKRALLTALR 428
+ ++R+ E + PNI R + R + +R
Sbjct: 243 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 278
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 173 TNRFSKDNI-----IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVE 222
T F+ D+ +G G +G VY + + V K + G + R E+E
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG-VEHQLRREIE 75
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
H+ H N++RL Y + + L+ EY G L + L+ + I+
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT----FDEQRTATIMEE 131
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
A AL Y H KV+HRDIK N+L+ + KI+DFG + S + GT
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTL 185
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
Y+ PE + NEK D++ GV+ E + G P +
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG G + V + ++ G VA+K K NP K FR EV + + H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 238 YCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
L+ EY + G + +L G M ++ EAR K A+ Y H+
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK-- 130
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YANSGL 354
++VHRD+K+ N+L+D + + KI+DFG + G T G+ Y APE +
Sbjct: 131 -RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKKY 187
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L ++G P D
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + ++ +L + L+ ++ + L + L
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 88
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 143
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 144 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 79
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 134
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 135 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM------NGTAVAVKKLLNNP-GQADKDFR 218
L+++ + RF ++ +G+ +G VY+G L AVA+K L + G ++FR
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEAR 276
E ++H N+V LLG + +++ Y ++G+L ++L R D G +
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 277 MK----------ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK- 325
+K ++ A + YL VVH+D+ + N+L+ + + KISD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 326 LLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ A + + ++APE G + SD++S+GVVL E +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
K +HRDIK++N+L+ E+ + K++DFG+A L + T V GT ++APE
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 178
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
+ K+D++S G+ +E G P P + L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRV 219
+ + A + + +G G +G+VY G + G T VA+K + ++ +F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEAR 276
E + ++VRLLG +G +++ E + G+L+ +LR +M + L +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 277 MKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL------ 327
K++ A +AYL+ K VHRD+ + N + E+F KI DFG+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 328 -GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
GK + R +++PE G+ SDV+SFGVVL E T
Sbjct: 182 RKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY NG L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG------------ 328
+AL+Y+H ++HRD+K NI IDE+ + KI DFGLAK +
Sbjct: 127 ----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 329 -AGKSHITTRVMGTFGYVAPEYAN-SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSE 386
G S T +GT YVA E + +G NEK D+YS G++ E I YP G
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG--MER 234
Query: 387 VNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRM 446
VN+++ L+ V + D D ++ L +D D +KRP +
Sbjct: 235 VNILKKLR-SVSIEFPPDFDDNKMKVEKKIIRL---------LIDHDPNKRPGART---L 281
Query: 447 LESEEYPIPRED 458
L S P+ +D
Sbjct: 282 LNSGWLPVKHQD 293
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGT------AVAVKKLLNNP-GQADKDFR 218
L+++ + RF ++ +G+ +G VY+G L AVA+K L + G ++FR
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEAR 276
E ++H N+V LLG + +++ Y ++G+L ++L R D G +
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 277 MK----------ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK- 325
+K ++ A + YL VVH+D+ + N+L+ + + KISD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 326 LLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ A + + ++APE G + SD++S+GVVL E +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 22/269 (8%)
Query: 178 KDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRLL 236
KD +G+G + + + K+++ +A+ + E+ A+ H N+V+L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT--QKEITALKLCEGHPNIVKLH 72
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ LV E +N G L + ++ + + + I+ A++++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIK----KKKHFSETEASYIMRKLVSAVSHMHDV--- 125
Query: 297 KVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSG 353
VVHRD+K N+L ++N + KI DFG A+L + T T Y APE N
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQN 184
Query: 354 LLNEKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
+E D++S GV+L ++G+ P + R + + VE +M ++++ + + E
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE---IMKKIKKGDFSFEG--EA 239
Query: 413 RPSTSALKRALLTALRCVDPDSDKRPKMS 441
+ S + L+ L VDP +KR KMS
Sbjct: 240 WKNVSQEAKDLIQGLLTVDP--NKRLKMS 266
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 90
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 145
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 146 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
K +HRDIK++N+L+ E+ + K++DFG+A L + T V GT ++APE
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 198
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
+ K+D++S G+ +E G P P + L+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 73
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 128
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF--GYVAPEY 349
E+ VHRD+ + N+L+ AKISDFGL+K L A ++ + G + + APE
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 350 ANSGLLNEKSDVYSFGVVLLEAIT 373
N + KSDV+SFGV++ EA +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ EY+ NG L +LR +M R + + LL K + E +E K +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RD+ + N L+++ K+SDFGL++ + + + + PE + KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 361 VYSFGVVLLEAIT-GRYPVD 379
+++FGV++ E + G+ P +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYE 208
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 251
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA++K+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
IG+G G+V + G VAVKK+ Q + EV + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
G + +V E++ G L D+ + E + L +AL+YLH V+H
Sbjct: 113 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIH 164
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR--VMGTFGYVAPEYANSGLLNEK 358
RDIKS +IL+ + K+SDFG + + R ++GT ++APE + +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVS---KEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 359 SDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSA 418
D++S G++++E I G P + P + +RR D + P ++ S+
Sbjct: 222 VDIWSLGIMVIEMIDGEPPY-FNEPPLQA-----------MRRIRDSLPPRVKDLHKVSS 269
Query: 419 LKRALLTALRCVDP 432
+ R L + +P
Sbjct: 270 VLRGFLDLMLVREP 283
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 171 SATNRFSKDNI-IGDGGYGVVYRGQLMNGTAVAV-------KKLLNNPGQADKDFRVEVE 222
S RF K +I IG G + VY+G L T V V +KL + Q F+ E E
Sbjct: 22 SNDGRFLKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQR---FKEEAE 77
Query: 223 AIGHVRHKNLVRLLGY---CIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK 278
+ ++H N+VR ++G + I LV E +G L+ +L+ + + +
Sbjct: 78 XLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ 137
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSHITTR 337
IL K L +LH P ++HRD+K NI I KI D GLA L ++
Sbjct: 138 IL----KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKA 189
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
V+GT + APE +E DVY+FG LE T YP
Sbjct: 190 VIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLEXATSEYP 228
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG G + V + ++ G VA+K K NP K FR EV + + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 238 YCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
L+ EY + G + +L G M ++ EAR K A+ Y H+
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK-- 133
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YANSGL 354
++VHRD+K+ N+L+D + + KI+DFG + G G Y APE +
Sbjct: 134 -RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKY 190
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L ++G P D
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 117
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N+ N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 28/212 (13%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHK 230
++ K IG+G YGVV++ + + G VA+KK L ++P R E+ + ++H
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHP 62
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-------LTWEARMKILLGT 283
NLV LL + LV+EY ++ L + D RG +TW+ T
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQ--------T 111
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+A+ + H+ +HRD+K NILI ++ K+ DFG A+LL G S + T
Sbjct: 112 LQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRW 167
Query: 344 YVAPE-YANSGLLNEKSDVYSFGVVLLEAITG 374
Y +PE DV++ G V E ++G
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 117
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
K +HRDIK++N+L+ E+ + K++DFG+A L + +GT ++APE
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 193
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
+ K+D++S G+ +E G P P + L+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 145
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 146 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 119
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 120 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H T + T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
T G+ Y APE + + DV+S GV+L ++G P D
Sbjct: 171 T--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 120
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 121 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
T G+ Y APE + + DV+S GV+L ++G P D
Sbjct: 171 T--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EAR-RFFQQIISAVEYCHRH--- 122
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL- 355
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G T+ G+ Y APE + L
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 180
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L + R P D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 132
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL- 355
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G T+ G+ Y APE + L
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 190
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L + R P D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 52/290 (17%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHVRHKNLV 233
F +++G G G +VYRG + + VAVK++L AD++ ++ E+ H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLRESD---EHPNVI 81
Query: 234 RLLGYCIEGTQRILVYEYVN----NGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
R +C E ++ ++Y+ L++++ D +L E + +L T LA+
Sbjct: 82 RY--FCTEKDRQ---FQYIAIELCAATLQEYVEQK--DFAHLGLEP-ITLLQQTTSGLAH 133
Query: 290 LHEAIEPKVVHRDIKSSNILIDE-----NFDAKISDFGLAKLLGAGKSHITTR--VMGTF 342
LH +VHRD+K NILI A ISDFGL K L G+ + R V GT
Sbjct: 134 LHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 343 GYVAPEYANSGLLNEKS---DVYSFGVVLLEAIT-GRYPVDYGRP-QSEVNLVEWLKMMV 397
G++APE + + D++S G V I+ G +P +G+ Q + N++ +
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP--FGKSLQRQANILLGACSLD 248
Query: 398 QLR--RSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
L + EDV+ R L+ + +DP KRP V++
Sbjct: 249 CLHPEKHEDVI-------------ARELIEKMIAMDP--QKRPSAKHVLK 283
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 122
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 123 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
K +HRDIK++N+L+ E+ + K++DFG+A L + +GT ++APE
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQ 178
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLV 390
+ K+D++S G+ +E G P P + L+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 131
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL- 355
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G T+ G+ Y APE + L
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 189
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L + R P D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H + T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH--ITTRVMGTFGYV 345
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H + T Y
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGR 382
APE NS + D++S G +L E ++ R P+ G+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGK 236
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 31/211 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 126
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT----RVMGTFGYVA 346
+P + HRD+KS NIL+ +N I+D GLA + + + RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 347 PEYANSGLL------NEKSDVYSFGVVLLEA 371
PE + + ++ D+++FG+VL E
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 498
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 499 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 126
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL- 355
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G T+ G+ Y APE + L
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYA 184
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
+ DV+S GV+L + R P D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
K ++G G +G V++G + V +K + + G Q+ + + AIG +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
H ++VRLLG C G+ LV +Y+ G+L +R G + + L W ++ A
Sbjct: 91 DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------A 143
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL E +VHR++ + N+L+ +++DFG+A LL K + +
Sbjct: 144 KGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRS 402
++A E + G +SDV+S+GV + E +T +G P + + L E + L +
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT------FGAEPYAGLRLAEVPDL---LEKG 251
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQV 443
E + P I T + ++C D + RP ++
Sbjct: 252 ERLAQPQICT-------IDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ + T + T Y
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 31/211 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 126
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT----RVMGTFGYVA 346
+P + HRD+KS NIL+ +N I+D GLA + + + RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 347 PEYANSGLL------NEKSDVYSFGVVLLEA 371
PE + + ++ D+++FG+VL E
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + IG G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 31/281 (11%)
Query: 181 IIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGY 238
+IG G VV VA+K++ Q D E++A+ H N+V
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCD----RGYLTWEARMKILLGTAKALAYLHEAI 294
+ + LV + ++ G++ ++ + G L IL + L YLH+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG----KSHITTRVMGTFGYVAPEYA 350
+ +HRD+K+ NIL+ E+ +I+DFG++ L G ++ + +GT ++APE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 351 NSGL-LNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPN 409
+ K+D++SFG+ +E TG P + P +V +M+ L+ P+
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKV-------LMLTLQNDP----PS 246
Query: 410 IETRPSTSALKRALLTALR-----CVDPDSDKRPKMSQVVR 445
+ET + + + R C+ D +KRP ++++R
Sbjct: 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ + T + T Y
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 31/211 (14%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 155
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT----RVMGTFGYVA 346
+P + HRD+KS NIL+ +N I+D GLA + + + RV GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 214
Query: 347 PEYANSGLL------NEKSDVYSFGVVLLEA 371
PE + + ++ D+++FG+VL E
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
K ++G G +G V++G + V +K + + G Q+ + + AIG +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
H ++VRLLG C G+ LV +Y+ G+L +R G + + L W ++ A
Sbjct: 73 DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------A 125
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
K + YL E +VHR++ + N+L+ +++DFG+A LL K + +
Sbjct: 126 KGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG-RPQSEVNLVEWLKMMVQLRRS 402
++A E + G +SDV+S+GV + E +T +G P + + L E + L +
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT------FGAEPYAGLRLAEVPDL---LEKG 233
Query: 403 EDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQV 443
E + P I T + ++C D + RP ++
Sbjct: 234 ERLAQPQICT-------IDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 118
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 148 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 204
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 259
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR--VMGTFGY 344
L+ LH V+HRDIKS +IL+ + K+SDFG + + R ++GT +
Sbjct: 260 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS---KEVPRRKXLVGTPYW 313
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+APE + + D++S G++++E + G P
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ + T + T Y
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEV 221
+ DL R K IG G + V + ++ G VAVK K N K FR EV
Sbjct: 1 MADLHIGNYRLLK--TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EV 57
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKI 279
+ + H N+V+L LV EY + G + +L G M ++ EAR K
Sbjct: 58 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-----EARAK- 111
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G T
Sbjct: 112 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 166
Query: 340 GTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
G+ Y APE + + DV+S GV+L ++G P D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNG--------TAVAVKKLLNNPGQADKDFRVEVEAIGHV 227
F ++G G YG V+ + ++G V K + + + R E + + H+
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 228 RHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAK 285
R + L Y + ++ L+ +Y+N G L L R T E ++I +G
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFT-EHEVQIYVGEIVL 170
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL +LH+ +++RDIK NIL+D N ++DFGL+K A ++ GT Y+
Sbjct: 171 ALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 346 APEYANSG--LLNEKSDVYSFGVVLLEAITGRYP 377
AP+ G ++ D +S GV++ E +TG P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAV+ K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
T G+ Y APE + + DV+S GV+L ++G P D
Sbjct: 171 T--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
KI L T KAL +L E + K++HRDIK SNIL+D + + K+ DFG++ L S TR
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTR 184
Query: 338 VMGTFGYVAPEYANSGLLNE----KSDVYSFGVVLLEAITGRYP 377
G Y+APE + + +SDV+S G+ L E TGR+P
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V + +G +AVKKL + P Q A + +R E+ + H++H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 109
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-DM-----CDRGYLTWEARMKILLGT 283
+N++ LL T E N+ L L G D+ C + LT + ++
Sbjct: 110 ENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI 163
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T
Sbjct: 164 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 216
Query: 344 YVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N D++S G ++ E +TGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 31/281 (11%)
Query: 181 IIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGY 238
+IG G VV VA+K++ Q D E++A+ H N+V
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCD----RGYLTWEARMKILLGTAKALAYLHEAI 294
+ + LV + ++ G++ ++ + G L IL + L YLH+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG----KSHITTRVMGTFGYVAPEYA 350
+ +HRD+K+ NIL+ E+ +I+DFG++ L G ++ + +GT ++APE
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 351 NSGL-LNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPN 409
+ K+D++SFG+ +E TG P + P +V +M+ L+ P+
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKV-------LMLTLQNDP----PS 241
Query: 410 IETRPSTSALKRALLTALR-----CVDPDSDKRPKMSQVVR 445
+ET + + + R C+ D +KRP ++++R
Sbjct: 242 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN---PGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG+G YGVV + + G VA+KK+ N A + R E++ + H +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII---- 117
Query: 238 YCIEGTQRILVYE------YVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I+ R V YV +E L + LT E L + L Y+H
Sbjct: 118 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG---AGKSHITTRVMGTFGYVAPE 348
A +V+HRD+K SN+L++EN + KI DFG+A+ L A + T + T Y APE
Sbjct: 177 SA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 349 YANSGLLNEKS---DVYSFGVVLLEAITGR 375
S L+E + D++S G + E + R
Sbjct: 234 LMLS--LHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 195
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 131/312 (41%), Gaps = 55/312 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY N L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG------------ 328
+AL+Y+H ++HRD+K NI IDE+ + KI DFGLAK +
Sbjct: 127 ----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 329 -AGKSHITTRVMGTFGYVAPEYAN-SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSE 386
G S T +GT YVA E + +G NEK D+YS G++ E I YP G
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG--MER 234
Query: 387 VNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRM 446
VN+++ L+ V + D D ++ L +D D +KRP +
Sbjct: 235 VNILKKLR-SVSIEFPPDFDDNKMKVEKKIIRL---------LIDHDPNKRPGART---L 281
Query: 447 LESEEYPIPRED 458
L S P+ +D
Sbjct: 282 LNSGWLPVKHQD 293
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 158
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 211
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 146
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 199
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 208
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 79
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 187
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAV+ K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-- 168
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
G+ Y APE + + DV+S GV+L ++G P D
Sbjct: 169 LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 176 FSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFR---VEVEAIGHV-RHK 230
F ++G G +G V+ + A+K L + D D VE + H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 231 NLVRLLGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYL---TWEARMKILLGTAK 285
L + +C T+ V EY+N G+L ++ C + L T+ A +I+LG
Sbjct: 80 FLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYA-AEIILG--- 131
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LLGAGKSHITTRVMGTFG 343
L +LH +V+RD+K NIL+D++ KI+DFG+ K +LG K T GT
Sbjct: 132 -LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNEFCGTPD 184
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
Y+APE N D +SFGV+L E + G+ P +G+ + E+
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 146
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 199
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 236 LGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ LV EYV G+L +L L A+ + +AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 131
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYA 350
+HR + + N+L+D + KI DFGLAK + G + R G F Y APE
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 187
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-- 168
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
G Y APE + + DV+S GV+L ++G P D
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 154
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 207
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 218 RVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR- 276
R EV + +++H N+V+ E +V +Y G+L + + +G L E +
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQ---KGVLFQEDQI 127
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ + AL ++H+ K++HRDIKS NI + ++ ++ DFG+A++L + +
Sbjct: 128 LDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELAR 183
Query: 337 RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
+GT Y++PE + N KSD+++ G VL E T ++ + G
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 132
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 185
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 154
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 207
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 236 LGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ LV EYV G+L +L L A+ + +AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYA 350
+HR + + N+L+D + KI DFGLAK + G + R G F Y APE
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 186
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 208
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEVE 222
D + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAY 115
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ + + ++
Sbjct: 116 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 184
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
+ T Y APE E D++S GV++ E I G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
+ T Y APE E D++S GV++ E I G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 132
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 185
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN---PGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG+G YGVV + + G VA+KK+ N A + R E++ + H +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII---- 116
Query: 238 YCIEGTQRILVYE------YVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I+ R V YV +E L + LT E L + L Y+H
Sbjct: 117 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG---AGKSHITTRVMGTFGYVAPE 348
A +V+HRD+K SN+L++EN + KI DFG+A+ L A + T + T Y APE
Sbjct: 176 SA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 349 YANSGLLNEKS---DVYSFGVVLLEAITGR 375
S L+E + D++S G + E + R
Sbjct: 233 LMLS--LHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 158
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---T 341
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ H + G T
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVAT 208
Query: 342 FGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N+ D++S G ++ E +TGR
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 78
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 133
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 186
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 26 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 82
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 137
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L+ LH V+HRDIKS +IL+ + K+SDFG + ++GT ++A
Sbjct: 138 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMA 193
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE + + D++S G++++E + G P
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 184
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 28 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 84
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 139
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L+ LH V+HRDIKS +IL+ + K+SDFG + ++GT ++A
Sbjct: 140 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMA 195
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE + + D++S G++++E + G P
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLV 233
F +G GG+GVV+ + ++ A+K++ L N A + EV+A+ + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 234 RLLGYCIE--GTQRIL-----VYEYVN-----NGNLEQWLRGDMCDRGYLTWEARMKILL 281
R +E T+++ VY Y+ NL+ W+ G C + I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR-CTIEERERSVCLHIFL 125
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT------ 335
A+A+ +LH ++HRD+K SNI + K+ DFGL + + T
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 336 -----TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
T +GT Y++PE + + K D++S G++L E + YP
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 236 LGYCIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ L V EYV G+L +L R + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYA 350
+HR++ + N+L+D + KI DFGLAK + G + R G F Y APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---T 341
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ H + G T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVAT 205
Query: 342 FGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N+ D++S G ++ E +TGR
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---T 341
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ H + G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVAT 185
Query: 342 FGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N+ D++S G ++ E +TGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 176 FSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFR---VEVEAIGHV-RHK 230
F ++G G +G V+ + A+K L + D D VE + H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 231 NLVRLLGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYL---TWEARMKILLGTAK 285
L + +C T+ V EY+N G+L ++ C + L T+ A +I+LG
Sbjct: 79 FLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYA-AEIILG--- 130
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LLGAGKSHITTRVMGTFG 343
L +LH +V+RD+K NIL+D++ KI+DFG+ K +LG K T GT
Sbjct: 131 -LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNXFCGTPD 183
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
Y+APE N D +SFGV+L E + G+ P +G+ + E+
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 226
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---T 341
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ H + G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVAT 185
Query: 342 FGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N+ D++S G ++ E +TGR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 71 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 127
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 182
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR--VMGTFGY 344
L+ LH V+HRDIKS +IL+ + K+SDFG + + R ++GT +
Sbjct: 183 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS---KEVPRRKXLVGTPYW 236
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+APE + + D++S G++++E + G P
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 90
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 145
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 198
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 236 LGYCIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ L V EYV G+L +L R + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYA 350
+HR++ + N+L+D + KI DFGLAK + G + R G F Y APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 192
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 22/252 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
IG+G G+V + +G VAVK + Q + EV + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
G + ++ E++ G L D+ + L E + +ALAYLH V+H
Sbjct: 113 VGEELWVLMEFLQGGALT-----DIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIH 164
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSD 360
RDIKS +IL+ + K+SDFG + ++GT ++APE + L + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 361 VYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALK 420
++S G++++E + G P P + ++R D P ++ S +
Sbjct: 224 IWSLGIMVIEMVDGEPPYFSDSP------------VQAMKRLRDSPPPKLKNSHKVSPVL 271
Query: 421 RALLTALRCVDP 432
R L + DP
Sbjct: 272 RDFLERMLVRDP 283
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 118
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ ALAYL + VHRDI + N+L+ K+ DFGL++ + + ++
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 171 SATNRFSKDN-----IIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRV---EV 221
+++NR DN ++G G +G V ++ G AVK L + D D E
Sbjct: 15 NSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL 280
+ R+ + L C + R+ V E+VN G+L ++ + EAR +
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFY 129
Query: 281 LG-TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
AL +LH+ +++RD+K N+L+D K++DFG+ K G T
Sbjct: 130 AAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFC 185
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
GT Y+APE L D ++ GV+L E + G P +
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 17 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 128
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L+ LH V+HRDIKS +IL+ + K+SDFG + ++GT ++A
Sbjct: 129 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMA 184
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE + + D++S G++++E + G P
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD--------RGYLTWEAR 276
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+ + ++
Sbjct: 147 ICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 337 -RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLK 394
++APE + +SDV+SFGV+L E + G P Y + + LK
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCRRLK 261
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
++ R+ D P + T L C + +RP S++V L
Sbjct: 262 EGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CAK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 184
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG----DMCDRGYLTWEARMKILLGTAK 285
+N++ LL E N+ L L G ++ LT + ++ +
Sbjct: 81 ENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYR 189
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 31/215 (14%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---T 341
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ H + G T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVAT 181
Query: 342 FGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
Y APE N N+ D++S G ++ E +TGR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 21 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 77
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 132
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR---VMGTFG 343
L+ LH V+HRDIKS +IL+ + K+SDFG A S R ++GT
Sbjct: 133 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPY 185
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
++APE + + D++S G++++E + G P
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD--------RGYLTWEAR 276
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+ + ++
Sbjct: 147 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 337 -RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLK 394
++APE + +SDV+SFGV+L E + G P Y + + LK
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFXRRLK 261
Query: 395 MMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
++ R+ D P + T L C + +RP S++V L
Sbjct: 262 EGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG----DMCDRGYLTWEARMKILLGTAK 285
+N++ LL E N+ L L G ++ LT + ++ +
Sbjct: 81 ENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+ T + T Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYR 189
Query: 346 APEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI D+GLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 163
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 164 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 218
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 273
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 498
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ ALAYL + VHRDI + N+L+ K+ DFGL++ + + ++
Sbjct: 499 QLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAI 372
++APE N SDV+ FGV + E +
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 163
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 164 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 221 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 271
Query: 395 MM 396
++
Sbjct: 272 VL 273
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 165
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 166 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 223 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 273
Query: 395 MM 396
++
Sbjct: 274 VL 275
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 157
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 158 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 215 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 265
Query: 395 MM 396
++
Sbjct: 266 VL 267
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHK 230
++ K IG+G YG V++ + VA+K++ ++ G R E+ + ++HK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK 61
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
N+VRL + LV+E+ + +L+++ D C+ G L E L K L +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCN-GDLDPEIVKSFLFQLLKGLGFC 117
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
H V+HRD+K N+LI+ N + K++DFGLA+ G + V+ T Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPV 378
L S D++S G + E P+
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 167
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 168 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 225 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 275
Query: 395 MM 396
++
Sbjct: 276 VL 277
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 236 LGYCIE-GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + G + LV EYV G+L +L L A+ + +AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 153
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG---TFGYVAPEYA 350
+HRD+ + N+L+D + KI DFGLAK + G R G F Y APE
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECL 209
Query: 351 NSGLLNEKSDVYSFGVVLLEAIT 373
SDV+SFGV L E +T
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
LH +VVHRD+K NIL+ + K++DFGLA++ + T V+ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 350 ANSGLLNEKSDVYSFGVVLLE 370
D++S G + E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAE 211
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 208
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 209 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 266 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 316
Query: 395 MM 396
++
Sbjct: 317 VL 318
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKL-LNNPGQA----DKDFRVEV 221
D++S R+ K + +G+G + VY+ + N VA+KK+ L + +A ++ E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-IL 280
+ + + H N++ LL + LV++++ +LE ++ D + + +K +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIK----DNSLVLTPSHIKAYM 118
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
L T + L YLH+ ++HRD+K +N+L+DEN K++DFGLAK G+ +V+
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 341 TFGYVAPEYA-NSGLLNEKSDVYSFGVVLLEAI 372
T Y APE + + D+++ G +L E +
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 181 IIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 235 LLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKALA 288
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EALR 144
Query: 289 YLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y H+ ++HRD+K N+L+ + + K+ DFG+A LG RV GT ++
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFM 200
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
APE + DV+ GV+L ++G P YG
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YG 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 180 NIIGDGGYGVVYRGQ------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+++G G + V + L+ +A K L G + E+ + ++H N+V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN----EIAVLHKIKHPNIV 79
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L G L+ + V+ G L + ++G+ T +++ A+ YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 294 IEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
+VHRD+K N+L +DE+ ISDFGL+K+ G + + GT GYVAPE
Sbjct: 136 ---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVL 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVDY 380
++ D +S GV+ + G YP Y
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD----------RGYLTWE 274
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+ + +
Sbjct: 149 HLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 335 TT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEW 392
++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCRR 263
Query: 393 LKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 264 LKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 55/312 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY N L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG------------ 328
+AL+Y+H ++HR++K NI IDE+ + KI DFGLAK +
Sbjct: 127 ----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 329 -AGKSHITTRVMGTFGYVAPEYAN-SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSE 386
G S T +GT YVA E + +G NEK D YS G++ E I YP G
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG----- 231
Query: 387 VNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRM 446
E + ++ +LR P+ + + +++ ++ L +D D +KRP +
Sbjct: 232 ---XERVNILKKLRSVSIEFPPDFDD--NKXKVEKKIIRLL--IDHDPNKRPGART---L 281
Query: 447 LESEEYPIPRED 458
L S P+ +D
Sbjct: 282 LNSGWLPVKHQD 293
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 149 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
++ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 263
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 264 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
++ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 261
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 262 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKN 231
R++ ++G G +G V + + K++N +KD EVE + + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+++L + + +V E G L ++ R + +I+ + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 292 EAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ +VHRD+K NIL++ ++ D KI DFGL+ + + R+ GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
Query: 349 YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
G +EK DV+S GV+L ++G P YG+ + ++
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDI 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 40/296 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD-----------RGYLTW 273
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 274 EARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 148 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 334 ITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVE 391
+ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCR 262
Query: 392 WLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 263 RLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
LH +VVHRD+K NIL+ + K++DFGLA++ + T V+ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 350 ANSGLLNEKSDVYSFGVVLLE 370
D++S G + E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAE 211
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
LH +VVHRD+K NIL+ + K++DFGLA++ + T V+ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 350 ANSGLLNEKSDVYSFGVVLLE 370
D++S G + E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAE 211
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 137
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 138 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 192
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 247
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
+ T Y APE E D++S G ++ E I G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 148
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 149 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 203
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 258
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 141
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 142 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 196
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 251
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 96
Query: 230 KNLVRLLGYCIEGTQRILV-YEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGT 283
V+L +C + +++ Y NG L +++R + C R Y T E
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------I 146
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 147 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 134
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 135 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 192 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 242
Query: 395 MM 396
++
Sbjct: 243 VL 244
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
++ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 252
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 253 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 142
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTR 337
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 143 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 338 VMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLK 394
Y APE S DV+S G VL E + G+ +P D G Q LVE +K
Sbjct: 200 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIK 250
Query: 395 MM 396
++
Sbjct: 251 VL 252
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 184 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
++ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 298
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 299 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
++ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 252
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 253 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFR 218
++ N FS IIG GG+G VY G++ + K++ G+ ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + + G + + Y ++ + + +N G+L L G + EA M
Sbjct: 243 LSLVSTGDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADM 294
Query: 278 K-----ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K
Sbjct: 295 RFYAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYP 377
H + +GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFR 218
++ N FS IIG GG+G VY G++ + K++ G+ ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + + G + + Y ++ + + +N G+L L G + EA M
Sbjct: 243 LSLVSTGDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADM 294
Query: 278 K-----ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K
Sbjct: 295 RFYAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYP 377
H + +GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFR 218
++ N FS IIG GG+G VY G++ + K++ G+ ++
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + + G + + Y ++ + + +N G+L L G + EA M
Sbjct: 242 LSLVSTGDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADM 293
Query: 278 K-----ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K
Sbjct: 294 RFYAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 346
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYP 377
H + +GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 347 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
+ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 261
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 262 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 141
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 142 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 196
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 251
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFR 218
++ N FS IIG GG+G VY G++ + K++ G+ ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + + G + + Y ++ + + +N G+L L G + EA M
Sbjct: 243 LSLVSTGDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADM 294
Query: 278 K-----ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K
Sbjct: 295 RFYAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 333 HITTRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYP 377
H + +GT GY+APE G+ + S D +S G +L + + G P
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 31/235 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIE-GTQRILVY-EYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LLGTAK 285
RL + G ++ +VY V + E R R Y + + + + +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGY 344
+LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 188
Query: 345 VAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR----GDMCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 162
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AK +A+L +HRD+ + NIL+ KI DFGLA+ +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI---TGRYPVDYGRPQ 384
+++ ++APE + + +SDV+S+G+ L E + YP G P
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPV 276
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
K ++ ++ P +K C D D KRP Q+V
Sbjct: 277 DS-------KFYKMIKEGFRMLSPEHAPAEMYDIMK-------TCWDADPLKRPTFKQIV 322
Query: 445 RMLESE 450
+++E +
Sbjct: 323 QLIEKQ 328
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGH 226
+ R+ + IG G G+V + G VAVKKL N A + +R E+ +
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKC 77
Query: 227 VRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
V HKN++ LL +E Q + + + + NL Q + ++ D +++ +L
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL-DHERMSY-----LLY 131
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ +LH A ++HRD+K SNI++ + KI DFGLA+ A + + T + T
Sbjct: 132 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVT 186
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
Y APE E D++S G ++ E + G
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 70
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ + L E +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME------LDHERMSYL 124
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 125 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 179
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 232
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
+ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 252
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 253 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
RL + ++ LV +YV + ++ + ++L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 136
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
AY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ + + Y A
Sbjct: 137 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 191
Query: 347 PEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
PE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 240
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
+ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 252
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 253 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
RL + ++ LV +YV + ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
AY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 347 PEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
PE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDY 380
GT GYVAPE ++ D +S GV+ + G YP Y
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDY 380
GT GYVAPE ++ D +S GV+ + G YP Y
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 181 IIGDGGYGVVYRGQLMNGTA-----------VAVKKLLNNPGQADKD-FRVEVEAIGHV- 227
++G G +G ++MN TA VAVK L ++++ E++ + +
Sbjct: 52 VLGSGAFG-----KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 106
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-------------------DMCDR 268
H+N+V LLG C L++EY G+L +LR + D
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
LT+E + AK + +L VHRD+ + N+L+ KI DFGLA+ +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT 373
+ +++ ++APE G+ KSDV+S+G++L E +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
RL + ++ LV +YV + ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
AY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 347 PEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
PE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 133
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMG 340
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++ +
Sbjct: 134 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 188
Query: 341 TFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
+ Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 243
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDY 380
GT GYVAPE ++ D +S GV+ + G YP Y
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
RL + ++ LV +YV + ++ + ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTRVMGTFG 343
AY+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 344 YVAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
Y APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRHKN 231
FS IG G +G VY + + N VA+KK+ + Q++ +D EV + +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ G + LV EY G+ L + L + G + LAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY-- 349
++HRD+K+ NIL+ E K+ DFG A ++ + GT ++APE
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 223
Query: 350 -ANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
+ G + K DV+S G+ +E + P+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ ++ + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGL + T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 41/297 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 333 HITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLV 390
+ ++APE + +SDV+SFGV+L E + G P Y + +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFC 261
Query: 391 EWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
LK ++ R+ D P + T L C + +RP S++V L
Sbjct: 262 RRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI FGLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 55/308 (17%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 68
Query: 228 RHKNLVRLLGYCIEGTQRILVYEY-VNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + N NL+ + L + + +L
Sbjct: 69 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 125 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 331 KSHITTRV---MGTFGYVAPEYANSG-------LLNEKSDVYSFGVVLLEAIT-GRYPV- 378
+S T + GT G+ APE L D++S G V ++ G++P
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 379 -DYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
Y R E N++ + + +++ D S + A + +D D KR
Sbjct: 242 DKYSR---ESNIIRGIFSLDEMKCLHD-----------RSLIAEATDLISQMIDHDPLKR 287
Query: 438 PKMSQVVR 445
P +V+R
Sbjct: 288 PTAMKVLR 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR----GDMCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 162
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AK +A+L +HRD+ + NIL+ KI DFGLA+ +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI---TGRYPVDYGRPQ 384
+++ ++APE + + +SDV+S+G+ L E + YP G P
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPV 276
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
K ++ ++ P +K C D D KRP Q+V
Sbjct: 277 DS-------KFYKMIKEGFRMLSPEHAPAEMYDIMK-------TCWDADPLKRPTFKQIV 322
Query: 445 RMLESE 450
+++E +
Sbjct: 323 QLIEKQ 328
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 25/232 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
L + ++ LV +YV + + R + L + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
Y+H + HRDIK N+L+D + K+ DFG AK L G+ +++ + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 348 EYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
E S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRHKN 231
FS IG G +G VY + + N VA+KK+ + Q++ +D EV + +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ G + LV EY G+ L + L + G + LAYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY-- 349
++HRD+K+ NIL+ E K+ DFG A ++ + GT ++APE
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 350 -ANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
+ G + K DV+S G+ +E + P+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR----GDMCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 155
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AK +A+L +HRD+ + NIL+ KI DFGLA+ +
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI---TGRYPVDYGRPQ 384
+++ ++APE + + +SDV+S+G+ L E + YP G P
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPV 269
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
K ++ ++ P +K C D D KRP Q+V
Sbjct: 270 DS-------KFYKMIKEGFRMLSPEHAPAEMYDIMK-------TCWDADPLKRPTFKQIV 315
Query: 445 RMLESE 450
+++E +
Sbjct: 316 QLIEKQ 321
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI DF LA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 143
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSG 353
I VHRDI NIL+ K+ DFGL++ + + + +++PE N
Sbjct: 144 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 354 LLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
SDV+ F V + E ++ G+ P + + + ++E + + + P++
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDRLPKPDL-- 250
Query: 413 RPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
+ L+T RC D D RP+ +++V
Sbjct: 251 ---CPPVLYTLMT--RCWDYDPSDRPRFTELV 277
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 48/223 (21%)
Query: 181 IIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKD--FRVEVEAIGHVRHKNLVRLLG 237
+IG G YG VY+G L AV V N ++ +RV + + H N+ R
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPL-----MEHDNIARF-- 72
Query: 238 YCIEGTQRI---------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
I G +R+ LV EY NG+L ++L D W + ++ + LA
Sbjct: 73 --IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLA 125
Query: 289 YLHEAI------EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK-------SHIT 335
YLH + +P + HRD+ S N+L+ + ISDFGL+ L + +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 336 TRVMGTFGYVAPEYANSGLLN--------EKSDVYSFGVVLLE 370
+GT Y+APE G +N ++ D+Y+ G++ E
Sbjct: 186 ISEVGTIRYMAPEVL-EGAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
L + ++ LV +YV + ++ + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTRVMGTFGY 344
Y+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R Y
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 345 VAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR----GDMCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 157
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AK +A+L +HRD+ + NIL+ KI DFGLA+ +
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI---TGRYPVDYGRPQ 384
+++ ++APE + + +SDV+S+G+ L E + YP G P
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPV 271
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
K ++ ++ P +K C D D KRP Q+V
Sbjct: 272 DS-------KFYKMIKEGFRMLSPEHAPAEMYDIMK-------TCWDADPLKRPTFKQIV 317
Query: 445 RMLESE 450
+++E +
Sbjct: 318 QLIEKQ 323
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 127
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSG 353
I VHRDI NIL+ K+ DFGL++ + + + +++PE N
Sbjct: 128 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 354 LLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
SDV+ F V + E ++ G+ P + + + ++E + + + P++
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDRLPKPDL-- 234
Query: 413 RPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
+ L+T RC D D RP+ +++V
Sbjct: 235 ---CPPVLYTLMT--RCWDYDPSDRPRFTELV 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 76
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 130
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 131 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 185
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 238
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 239 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 268
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEAIGHV 227
++F ++G G +G V+ + ++G+ + K+L +D ++E + + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 228 RHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H +V+L + EG + L+ +++ G+L L ++ T E L A A
Sbjct: 84 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALA 138
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L +LH +++RD+K NIL+DE K++DFGL+K GT Y+A
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMA 194
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE N + +D +SFGV++ E +TG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 240
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 241 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKN 231
R++ ++G G +G V + + K++N +KD EVE + + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+++L + + +V E G L ++ R + +I+ + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 292 EAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ +VHRD+K NIL++ ++ D KI DFGL+ + + R+ GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
Query: 349 YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
G +EK DV+S GV+L ++G P YG+ + ++
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDI 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
L + ++ LV +YV + ++ + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGK---SHITTRVMGTFGY 344
Y+H + HRDIK N+L+D + K+ DFG AK L G+ S+I +R Y
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 345 VAPEYANSGLLNEKS-DVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMM 396
APE S DV+S G VL E + G+ +P D G Q LVE +K++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ----LVEIIKVL 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR----GDMCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 139
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AK +A+L +HRD+ + NIL+ KI DFGLA+ +
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 329 AGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAI---TGRYPVDYGRPQ 384
+++ ++APE + + +SDV+S+G+ L E + YP G P
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPV 253
Query: 385 SEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
K ++ ++ P +K C D D KRP Q+V
Sbjct: 254 DS-------KFYKMIKEGFRMLSPEHAPAEMYDIMK-------TCWDADPLKRPTFKQIV 299
Query: 445 RMLESE 450
+++E +
Sbjct: 300 QLIEKQ 305
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQA----DKDFRVEVEAIGHVRHK 230
F +G G + VV + G AVK + P +A + E+ + ++H+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI---PKKALKGKESSIENEIAVLRKIKHE 80
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
N+V L LV + V+ G L + ++G+ T + ++ A+ YL
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 291 HEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
H +VHRD+K N+L DE ISDFGL+K+ GK + + GT GYVAP
Sbjct: 137 HRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAP 191
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
E ++ D +S GV+ + G YP Y S++
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDSKL 230
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 269
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 240
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 241 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 270
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKN 231
R++ ++G G +G V + + K++N +KD EVE + + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+++L + + +V E G L ++ R + +I+ + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 292 EAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
+ +VHRD+K NIL++ ++ D KI DFGL+ + + R+ GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE 193
Query: 349 YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
G +EK DV+S GV+L ++G P YG+ + ++
Sbjct: 194 VLR-GTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDI 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 79
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 80 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 133
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + +
Sbjct: 134 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFV 188
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
T Y APE E D++S G ++ E I G
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 22/203 (10%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLL 236
+G G YG V +G VA+KKL + P Q A + +R E+ + H++H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 89
Query: 237 GYCIEGTQRILVYE-YVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAI 294
+ Y+ Y+ ++ L+ M G E +++ L+ K L Y+H A
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSA- 145
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS-HITTRVMGTFGYVAPEYANSG 353
VVHRD+K N+ ++E+ + KI DFGLA+ A + ++ TR Y APE S
Sbjct: 146 --GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSW 198
Query: 354 L-LNEKSDVYSFGVVLLEAITGR 375
+ N+ D++S G ++ E +TG+
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 131
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSG 353
I VHRDI NIL+ K+ DFGL++ + + + +++PE N
Sbjct: 132 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 354 LLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
SDV+ F V + E ++ G+ P + + + ++E + + + P++
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE---------KGDRLPKPDL-- 238
Query: 413 RPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
+ L+T RC D D RP+ +++V
Sbjct: 239 ---CPPVLYTLMT--RCWDYDPSDRPRFTELV 265
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ + L E +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYL 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 233
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 234 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 115
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ + L E +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYL 169
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 224
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 277
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 307
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 15/232 (6%)
Query: 150 SGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN 209
S P + L +W + + ++ F ++ +G G +VYR + K+L
Sbjct: 29 SAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK 88
Query: 210 PGQADKDF-RVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDR 268
DK R E+ + + H N+++L T+ LV E V G L + ++
Sbjct: 89 --TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD----RIVEK 142
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDE---NFDAKISDFGLAK 325
GY + + +A+AYLHE +VHRD+K N+L + KI+DFGL+K
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
Query: 326 LLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
++ + V GT GY APE + D++S G++ + G P
Sbjct: 200 IVE--HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 70
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ + L E +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYL 124
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 125 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 179
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 232
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 233
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 234 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 263
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 115
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ + L E +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME------LDHERMSYL 169
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 224
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYID----QWNKVIE 277
Query: 398 QL--------RRSEDVVDPNIETRPSTSAL 419
QL ++ + V +E RP + L
Sbjct: 278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGL 307
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 45/279 (16%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G G +G V+ + +G +K + + Q + E+E + + H N++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 240 IEGTQRILVYEYVNNGNLEQWL-----RGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
+ +V E G L + + RG GY+ +++ ALAY H
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA-----ELMKQMMNALAYFHSQ- 143
Query: 295 EPKVVHRDIKSSNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAN 351
VVH+D+K NIL + + KI DFGLA+L + + +T GT Y+APE
Sbjct: 144 --HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFK 199
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPN-- 409
+ K D++S GVV+ +TG P G EV ++ +PN
Sbjct: 200 RD-VTFKCDIWSAGVVMYFLLTGCLPFT-GTSLEEV------------QQKATYKEPNYA 245
Query: 410 IETRPSTSA---LKRALLTALRCVDPDSDKRPKMSQVVR 445
+E RP T L + +LT D ++RP +QV+
Sbjct: 246 VECRPLTPQAVDLLKQMLTK------DPERRPSAAQVLH 278
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHK 230
++ K IG+G YG V++ + VA+K++ ++ G R E+ + ++HK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK 61
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
N+VRL + LV+E+ + +L+++ D C+ G L E L K L +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCN-GDLDPEIVKSFLFQLLKGLGFC 117
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
H V+HRD+K N+LI+ N + K+++FGLA+ G + V+ T Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPV 378
L S D++S G + E P+
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G G +GVV+R + G A K ++ P ++DK+ R E++ + +RH LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + +++YE+++ G L + + + ++ + ++ + K L ++HE V
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 171
Query: 300 HRDIKSSNILI--DENFDAKISDFGLAKLLGAGKS-HITTRVMGTFGYVAPEYANSGLLN 356
H D+K NI+ + + K+ DFGL L +S +TT GT + APE A +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 357 EKSDVYSFGVVLLEAITGRYP 377
+D++S GV+ ++G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEAIGHV 227
++F ++G G +G V+ + ++G+ + K+L +D ++E + + V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 228 RHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H +V+L + EG + L+ +++ G+L L ++ T E L A A
Sbjct: 85 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALA 139
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L +LH +++RD+K NIL+DE K++DFGL+K GT Y+A
Sbjct: 140 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMA 195
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE N + +D +SFGV++ E +TG P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEAIGHV 227
++F ++G G +G V+ + ++G+ + K+L +D ++E + + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 228 RHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H +V+L + EG + L+ +++ G+L L ++ T E L A A
Sbjct: 84 NHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALA 138
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L +LH +++RD+K NIL+DE K++DFGL+K GT Y+A
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMA 194
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE N + +D +SFGV++ E +TG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 22/203 (10%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLL 236
+G G YG V +G VA+KKL + P Q A + +R E+ + H++H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 107
Query: 237 GYCIEGTQRILVYE-YVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAI 294
+ Y+ Y+ ++ L+ M G E +++ L+ K L Y+H A
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSA- 163
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS-HITTRVMGTFGYVAPEYANSG 353
VVHRD+K N+ ++E+ + KI DFGLA+ A + ++ TR Y APE S
Sbjct: 164 --GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSW 216
Query: 354 L-LNEKSDVYSFGVVLLEAITGR 375
+ N+ D++S G ++ E +TG+
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+ T + T Y
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWY 188
Query: 345 VAPEYA-NSGLLNEKSDVYSFGVVLLEAITGR 375
APE N N+ D++S G ++ E +TGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + H N+V+L LV EY + G + +L G ++ E
Sbjct: 61 FR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK-- 168
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
G Y APE + + DV+S GV+L ++G P D
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 44/314 (14%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++ D KI DFGLA K+ G+ T + GT Y+APE + + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL-- 232
Query: 371 AITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCV 430
Y + G+P E + ++ + ++++++E V +I P SAL R +L A
Sbjct: 233 -----YTLLVGKPPFETSCLK--ETYIRIKKNEYSVPRHIN--PVASALIRRMLHA---- 279
Query: 431 DPDSDKRPKMSQVV 444
D RP +++++
Sbjct: 280 --DPTLRPSVAELL 291
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGT--------AVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++G GGYG V++ + + G V K ++ + + E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V L+ G + L+ EY++ G L L + G + L + AL +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQ 139
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+++RD+K NI+++ K++DFGL K +T GT Y+APE
Sbjct: 140 K---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
N D +S G ++ + +TG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 170 QSATNRF---SKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIG 225
Q A N F SK I+G G +G V++ + K++ G DK+ + E+ +
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLGTA 284
+ H NL++L +LV EYV+ G L + D Y LT + +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQIC 197
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDA---KISDFGLAKLLGAGKSHITTRV-MG 340
+ + ++H+ ++H D+K NIL N DA KI DFGLA+ K +V G
Sbjct: 198 EGIRHMHQMY---ILHLDLKPENILC-VNRDAKQIKIIDFGLARRY---KPREKLKVNFG 250
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
T ++APE N ++ +D++S GV+ ++G P
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGT--------AVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++G GGYG V++ + + G V K ++ + + E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V L+ G + L+ EY++ G L L + G + L + AL +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQ 139
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+++RD+K NI+++ K++DFGL K +T GT Y+APE
Sbjct: 140 K---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
N D +S G ++ + +TG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR 228
Q+ N +G G G V++ + G +AVK++ + G +++ R+ ++ ++
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLK 79
Query: 229 HKN---LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
+ +V+ G I T + E + G + L+ M +G + K+ + K
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRM--QGPIPERILGKMTVAIVK 135
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
AL YL E + V+HRD+K SNIL+DE K+ DFG++ L K+ R G Y+
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYM 191
Query: 346 APEYANSGLLNE-----KSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
APE + + ++DV+S G+ L+E TG++P + EV
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G+GG+ V + L +G A+K++L + Q ++ + E + H N++RL+ YC+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 241 E----GTQRILVYEYVNNGNLEQWLRGDMCDRG-YLTWEARMKILLGTAKALAYLHEAIE 295
+ L+ + G L + + D+G +LT + + +LLG + L EAI
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQILWLLLGICRGL----EAIH 151
Query: 296 PK-VVHRDIKSSNILIDENFDAKISDFG---LAKLLGAGKSHITT-----RVMGTFGYVA 346
K HRD+K +NIL+ + + D G A + G T T Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 347 PEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSE 403
PE + +++E++DV+S G VL + G P D + + + + VQ + S
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-----VALAVQNQLS- 265
Query: 404 DVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIP 455
I P S+ LL ++ VDP +RP + ++ LE+ + P P
Sbjct: 266 ------IPQSPRHSSALWQLLNSMMTVDP--HQRPHIPLLLSQLEALQPPAP 309
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G G +GVV+R + G A K ++ P ++DK+ R E++ + +RH LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + +++YE+++ G L + + + ++ + ++ + K L ++HE V
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 277
Query: 300 HRDIKSSNILI--DENFDAKISDFGLAKLLGAGKS-HITTRVMGTFGYVAPEYANSGLLN 356
H D+K NI+ + + K+ DFGL L +S +TT GT + APE A +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 357 EKSDVYSFGVVLLEAITGRYP 377
+D++S GV+ ++G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 69
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-----DMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 121 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 42/268 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 82
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 136
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 137 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 191
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYID----QWNKVIE 244
Query: 398 QL--------RRSEDVVDPNIETRPSTS 417
QL ++ + V +E RP +
Sbjct: 245 QLGTPCPEFMKKLQPTVRTYVENRPKYA 272
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 42/268 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYID----QWNKVIE 233
Query: 398 QL--------RRSEDVVDPNIETRPSTS 417
QL ++ + V +E RP +
Sbjct: 234 QLGTPCPEFMKKLQPTVRTYVENRPKYA 261
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+ K + +G+G Y VY+G+ + VA+K +L + G R EV + ++H N+
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANI 62
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLH 291
V L LV+EY++ +L+Q+L D C G + +K+ L + LAY H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDC--GNIINMHNVKLFLFQLLRGLAYCH 117
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE-YA 350
KV+HRD+K N+LI+E + K++DFGLA+ V+ T Y P+
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILL 173
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGR 375
S + + D++ G + E TGR
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 68
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-----DMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 120 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---- 227
AT+R+ IG G YG VY+ + + K + P + + + V
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 228 -----RHKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
H N+VRL+ C T R LV+E+V+ +L +L D L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIK 123
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
++ + L +LH +VHRD+K NIL+ K++DFGLA++ + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
V+ T Y APE D++S G + E
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 211
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 129/304 (42%), Gaps = 51/304 (16%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 86
Query: 228 RHKNLVRLLGYCIEGTQRILVYEY-VNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + N NL+ + L + + +L
Sbjct: 87 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 143 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 331 KSHITTRV---MGTFGYVAPEYANSGL---LNEKSDVYSFGVVLLEAIT-GRYPV--DYG 381
+ + GT G+ APE L D++S G V ++ G++P Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 382 RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMS 441
R E N++ + + +++ D S + A + +D D KRP
Sbjct: 260 R---ESNIIRGIFSLDEMKCLHD-----------RSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 442 QVVR 445
+V+R
Sbjct: 306 KVLR 309
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 129/304 (42%), Gaps = 51/304 (16%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 86
Query: 228 RHKNLVRLLGYCIEGTQRILVYEY-VNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + N NL+ + L + + +L
Sbjct: 87 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 143 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 331 KSHITTRV---MGTFGYVAPEYANSGL---LNEKSDVYSFGVVLLEAIT-GRYPV--DYG 381
+ + GT G+ APE L D++S G V ++ G++P Y
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 382 RPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMS 441
R E N++ + + +++ D S + A + +D D KRP
Sbjct: 260 R---ESNIIRGIFSLDEMKCLHD-----------RSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 442 QVVR 445
+V+R
Sbjct: 306 KVLR 309
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 176 FSKDNIIGDGGYGV--VYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH--VRHKN 231
F KD IG G +GV + R +L VAVK + A D V+ E I H +RH N
Sbjct: 24 FVKD--IGSGNFGVARLMRDKL-TKELVAVKYIERG---AAIDENVQREIINHRSLRHPN 77
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR + T ++ EY + G L + + C+ G + + ++Y H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 292 EAIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK---LLGAGKSHITTRVMGTFGYVA 346
++ HRD+K N L+D + KI DFG +K L KS + GT Y+A
Sbjct: 134 SM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIA 185
Query: 347 PEYANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
PE + K +DV+S GV L + G YP +
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLRG------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+LR D D L + A+ +A+L +HRD+ + N+L+
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 312 ENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
AKI DFGLA+ + ++I ++APE + +SDV+S+G++L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 371 AIT 373
+
Sbjct: 255 IFS 257
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 66
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-----DMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 117
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 118 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 67
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-----DMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 119 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGH 226
+ R+ + IG G G+V + G VAVKKL N A + +R E+ +
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKC 79
Query: 227 VRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
V HKN++ LL +E Q + + + + NL Q + ++ D +++ +L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL-DHERMSY-----LLY 133
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ +LH A ++HRD+K SNI++ + KI DFGLA+ A + + T + T
Sbjct: 134 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVT 188
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITG 374
Y APE D++S G ++ E + G
Sbjct: 189 RYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 71 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 258 EQWLRG------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+LR D D L + A+ +A+L +HRD+ + N+L+
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 312 ENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
AKI DFGLA+ + ++I ++APE + +SDV+S+G++L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 371 AIT 373
+
Sbjct: 247 IFS 249
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 48/316 (15%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLAKLL---GAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVL 368
++ D KI DFGLA + G K + GT Y+APE + + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKDLC----GTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 369 LEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALR 428
Y + G+P E + ++ + ++++++E V +I P SAL R +L A
Sbjct: 233 -------YTLLVGKPPFETSCLK--ETYIRIKKNEYSVPRHIN--PVASALIRRMLHA-- 279
Query: 429 CVDPDSDKRPKMSQVV 444
D RP +++++
Sbjct: 280 ----DPTLRPSVAELL 291
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE ++ SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
++ D KI DFGLA K+ G+ + GT Y+APE + + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL-- 232
Query: 371 AITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCV 430
Y + G+P E + ++ + ++++++E V +I P SAL R +L A
Sbjct: 233 -----YTLLVGKPPFETSCLK--ETYIRIKKNEYSVPRHIN--PVASALIRRMLHA---- 279
Query: 431 DPDSDKRPKMSQVV 444
D RP +++++
Sbjct: 280 --DPTLRPSVAELL 291
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 143
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 143
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 31/240 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNL 232
R ++ +GG+ VY Q + +G A+K+LL+N + ++ EV + + H N+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 233 VRLLGYCIEGTQR-------ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
V+ G + L+ + G L ++L+ M RG L+ + +KI T +
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCR 147
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH------------ 333
A+ ++H +P ++HRD+K N+L+ K+ DFG A + +
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 334 -ITTRVMGTFGYVAPE----YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVN 388
IT T Y PE Y+N + EK D+++ G +L ++P + G VN
Sbjct: 207 EITRNT--TPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN 263
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 94
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 145
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 146 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 240
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 42/249 (16%)
Query: 143 LTAPSPL-SGL--PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNG 198
+++P P SG E + W RDLQ +G G YG V G
Sbjct: 1 MSSPPPARSGFYRQEVTKTAWEVRAVYRDLQP----------VGSGAYGAVCSAVDGRTG 50
Query: 199 TAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLLGYCI------EGTQRILV 248
VA+KKL P Q A + +R E+ + H+RH+N++ LL + T LV
Sbjct: 51 AKVAIKKLYR-PFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 249 YEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAIEPKVVHRDIKSSN 307
++ +L + ++ + E R++ L+ K L Y+H A ++HRD+K N
Sbjct: 109 MPFMGT-DLGKLMKHEKLG------EDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGN 158
Query: 308 ILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA-NSGLLNEKSDVYSFGV 366
+ ++E+ + KI DFGLA+ S + V+ T Y APE N + D++S G
Sbjct: 159 LAVNEDCELKILDFGLAR---QADSEMXGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGC 214
Query: 367 VLLEAITGR 375
++ E ITG+
Sbjct: 215 IMAEMITGK 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 73
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 124
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 125 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL-----LNNPGQADK---DFRVEVEAI 224
++ ++IG G VV R G AVK + +P Q ++ R E +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 225 GHVR-HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
V H +++ L+ + LV++ + G L +L ++ L+ + I+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSL 209
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+A+++LH +VHRD+K NIL+D+N ++SDFG + L G+ + GT G
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPG 264
Query: 344 YVAPEYANSGL------LNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMV 397
Y+APE + ++ D+++ GV+L + G P + R + L+M++
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIM 318
Query: 398 QLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDS 434
+ + P + R ST + L++ L VDP++
Sbjct: 319 EGQYQ--FSSPEWDDRSSTV---KDLISRLLQVDPEA 350
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAKLLGAGKSHITTR-VMGTFGYVAPEY 349
+V HRD+K N L+D + KI+DFG +K A H + +GT Y+APE
Sbjct: 134 M---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEV 187
Query: 350 ANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
+ K +DV+S GV L + G YP +
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + D EV+ + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K +GT Y+
Sbjct: 141 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYI 195
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
APE + G +EK DV+S GV+L ++G P +
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + D EV+ + +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K +GT Y+
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYI 201
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
APE + G +EK DV+S GV+L ++G P +
Sbjct: 202 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 139
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR-- 218
W L + F ++G GG+G V+ Q+ G A KKL + K ++
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 219 -VEVEAIGHVRHKNLVRLLGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEA 275
VE + + V H + L Y E T LV +N G++ + D + G+
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----Q 287
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + TA+ ++ L + +++RD+K N+L+D++ + +ISD GLA L AG++ T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-T 346
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
GT G++APE + D ++ GV L E I R P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR-- 218
W L + F ++G GG+G V+ Q+ G A KKL + K ++
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 219 -VEVEAIGHVRHKNLVRLLGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEA 275
VE + + V H + L Y E T LV +N G++ + D + G+
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----Q 287
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + TA+ ++ L + +++RD+K N+L+D++ + +ISD GLA L AG++ T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-T 346
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
GT G++APE + D ++ GV L E I R P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K +GT Y+
Sbjct: 164 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYI 218
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
APE + G +EK DV+S GV+L ++G P +
Sbjct: 219 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR-- 218
W L + F ++G GG+G V+ Q+ G A KKL + K ++
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 219 -VEVEAIGHVRHKNLVRLLGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEA 275
VE + + V H + L Y E T LV +N G++ + D + G+
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----Q 287
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + TA+ ++ L + +++RD+K N+L+D++ + +ISD GLA L AG++ T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-T 346
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
GT G++APE + D ++ GV L E I R P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNP-GQADKDFRVEVE-AIGHVRHKNLVRLLGY 238
+G G YGVV + + + +G +AVK++ Q K ++++ ++ V V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM-KILLGTAKALAYLHEAIEPK 297
+ E ++ +L+++ + + D+G E + KI + KAL +LH +
Sbjct: 119 LFREGDVWICMELMDT-SLDKFYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL--- 354
V+HRD+K SN+LI+ K+ DFG++ L S T G Y+APE N L
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 355 -LNEKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLV 390
+ KSD++S G+ ++E R+P D +G P ++ V
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR-- 218
W L + F ++G GG+G V+ Q+ G A KKL + K ++
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 219 -VEVEAIGHVRHKNLVRLLGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEA 275
VE + + V H + L Y E T LV +N G++ + D + G+
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----Q 287
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ + TA+ ++ L + +++RD+K N+L+D++ + +ISD GLA L AG++ T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-T 346
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
GT G++APE + D ++ GV L E I R P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 139
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTFG 343
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K +GT
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
YV+PE + SD+++ G ++ + + G P G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 22/275 (8%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM---NGTAVAVKKLLNNPGQADKDFR 218
W L N F + ++G GG+G V Q+ A + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + I + V L Y E + LV +N G+L+ + M G+ EAR
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP--EARA 288
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ A+ L + ++V+RD+K NIL+D++ +ISD GLA + G++ I R
Sbjct: 289 --VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR 345
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMV 397
V GT GY+APE + D ++ G +L E I G+ P + + + VE L V
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
Query: 398 QLRRSEDVVDPNIETRPSTSALKRALLTALRCVDP 432
SE S R+L + L C DP
Sbjct: 405 PEEYSERF-----------SPQARSLCSQLLCKDP 428
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 55/308 (17%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 68
Query: 228 RHKNLVRLLGYCIEGTQRILVYEY-VNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + N NL+ + L + + +L
Sbjct: 69 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 125 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 331 KSHITTRV---MGTFGYVAPEYANSG-------LLNEKSDVYSFGVVLLEAIT-GRYPV- 378
+ + GT G+ APE L D++S G V ++ G++P
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 379 -DYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKR 437
Y R E N++ + + +++ D S + A + +D D KR
Sbjct: 242 DKYSR---ESNIIRGIFSLDEMKCLHD-----------RSLIAEATDLISQMIDHDPLKR 287
Query: 438 PKMSQVVR 445
P +V+R
Sbjct: 288 PTAMKVLR 295
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + D EV+ + +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K +GT Y+
Sbjct: 165 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYI 219
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
APE + G +EK DV+S GV+L ++G P +
Sbjct: 220 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+ + L +LH +VHRD+K NIL+ K++DFGLA++ + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVV 172
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
T Y APE D++S G + E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 30/193 (15%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLR----------------GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
+LR + R L + +++ A+ +A+L +HR
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV------AQGMAFL---ASKNCIHR 188
Query: 302 DIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSD 360
D+ + N+L+ AKI DFGLA+ + ++I ++APE + +SD
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
Query: 361 VYSFGVVLLEAIT 373
V+S+G++L E +
Sbjct: 249 VWSYGILLWEIFS 261
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 28/252 (11%)
Query: 181 IIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEA-----IGHVRHKNLVRL 235
+IG G +G V + K+L K + + + +V+H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ V +Y+N G L L+ + C +L AR A AL YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARF-YAAEIASALGYLHSL-- 158
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
+V+RD+K NIL+D ++DFGL K + T+ GT Y+APE +
Sbjct: 159 -NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 356 NEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPS 415
+ D + G VL E + G P Y R +E+ +++++ ++ +P+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEM--------------YDNILNKPLQLKPN 261
Query: 416 TSALKRALLTAL 427
+ R LL L
Sbjct: 262 ITNSARHLLEGL 273
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 22/275 (8%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM---NGTAVAVKKLLNNPGQADKDFR 218
W L N F + ++G GG+G V Q+ A + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + I + V L Y E + LV +N G+L+ + M G+ EAR
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP--EARA 288
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ A+ L + ++V+RD+K NIL+D++ +ISD GLA + G++ I R
Sbjct: 289 --VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR 345
Query: 338 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMV 397
V GT GY+APE + D ++ G +L E I G+ P + + + VE L V
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
Query: 398 QLRRSEDVVDPNIETRPSTSALKRALLTALRCVDP 432
SE S R+L + L C DP
Sbjct: 405 PEEYSERF-----------SPQARSLCSQLLCKDP 428
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK---LLGAGKSHITTRVMGTFGYVAP 347
+V HRD+K N L+D + KI DFG +K L KS +GT Y+AP
Sbjct: 133 M---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-----TVGTPAYIAP 184
Query: 348 EYANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
E + K +DV+S GV L + G YP +
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR 375
T Y APE E D++S G ++ E + +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+ + L +LH +VHRD+K NIL+ K++DFGLA++ + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VV 172
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
T Y APE D++S G + E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWE 274
E + + + H V+L + + Y NG L +++R + C R Y T E
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE 138
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSH 333
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L K
Sbjct: 139 --------IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 334 ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
+GT YV+PE + SD+++ G ++ + + G P G
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE----------PKVVHRDIKSSN 307
+LR L + I TA LH + + +HRD+ + N
Sbjct: 138 LNFLRRK---SRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 308 ILIDENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGV 366
+L+ AKI DFGLA+ + ++I ++APE + +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 367 VLLEAIT 373
+L E +
Sbjct: 255 LLWEIFS 261
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 42/268 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV 186
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGR--YPVDYGRPQSEVNLVEWLKMMV 397
T Y APE E D++S G ++ E + + +P GR + +W K++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYID----QWNKVIE 239
Query: 398 QL--------RRSEDVVDPNIETRPSTS 417
QL ++ + V +E RP +
Sbjct: 240 QLGTPCPEFMKKLQPTVRTYVENRPKYA 267
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVR 228
R+ + +G GG+ Y M+ V K +L P Q +K E+ +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
+ ++V G+ + +V E +L + + R +T + T + +
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQ 140
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL---GAGKSHITTRVMGTFGYV 345
YLH +V+HRD+K N+ ++++ D KI DFGLA + G K + GT Y+
Sbjct: 141 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC----GTPNYI 193
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDV 405
APE + + D++S G +L Y + G+P E + ++ + ++++++E
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCIL-------YTLLVGKPPFETSCLK--ETYIRIKKNEYS 244
Query: 406 VDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
V +I P SAL R +L A D RP +++++
Sbjct: 245 VPRHIN--PVASALIRRMLHA------DPTLRPSVAELL 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 109
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+ + L +LH +VHRD+K NIL+ K++DFGLA++ + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVV 172
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLE 370
T Y APE D++S G + E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 109
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK---------------DFRVEVEAIGH 226
+G G YG V + NG + K++ Q DK + E+ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIK-KSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWL---RGDMCDRGYLTWEARMKILLG 282
+ H N+++L + LV E+ G L EQ + + D CD + MK +L
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI-----MKQILS 157
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDEN---FDAKISDFGLAKLLGAGKSHITTRVM 339
+ YLH+ +VHRDIK NIL++ + KI DFGL+ K + +
Sbjct: 158 ---GICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLRDRL 209
Query: 340 GTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVE 391
GT Y+APE NEK DV+S GV++ + G P Q + VE
Sbjct: 210 GTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 83
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ ++ + ++ + L Y
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKY 138
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
+H A ++HRD+K SN+ ++E+ + +I DFGLA+ T + T Y APE
Sbjct: 139 IHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRAPEI 191
Query: 350 A-NSGLLNEKSDVYSFGVVLLEAITGR 375
N N+ D++S G ++ E + G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ ++ + ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKY 146
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
+H A ++HRD+K SN+ ++E+ + +I DFGLA+ T + T Y APE
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEI 199
Query: 350 A-NSGLLNEKSDVYSFGVVLLEAITGR 375
N N+ D++S G ++ E + G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 32/195 (16%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLR------------------GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+LR + R L + +++ A+ +A+L +
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQV------AQGMAFL---ASKNCI 188
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNEK 358
HRD+ + N+L+ AKI DFGLA+ + ++I ++APE + +
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 359 SDVYSFGVVLLEAIT 373
SDV+S+G++L E +
Sbjct: 249 SDVWSYGILLWEIFS 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 15/227 (6%)
Query: 157 HLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD 216
+G G F + ++ + +G G + VV R K++N + +D
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 217 F-RVEVEA--IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW 273
F ++E EA ++H N+VRL E + LV++ V G L + D+ R + +
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSE 127
Query: 274 EARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA---KISDFGLAKLLGAG 330
+ +++AY H +VHR++K N+L+ K++DFGLA +
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 182
Query: 331 KSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
S GT GY++PE ++ D+++ GV+L + G P
Sbjct: 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 181 IIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 235 LLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKALA 288
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EALR 146
Query: 289 YLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y H+ ++HRD+K +L+ + + K+ FG+A LG RV GT ++
Sbjct: 147 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFM 202
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
APE + DV+ GV+L ++G P YG
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YG 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 104
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ AG + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 162 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV----AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+IG G Y V +L + VKK L N + + E + + L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 237 GYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 172
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
+++RD+K N+L+D K++D+G+ K G T+ GT Y+APE
Sbjct: 173 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 356 NEKSDVYSFGVVLLEAITGRYPVD 379
D ++ GV++ E + GR P D
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 181 IIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 235 LLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKALA 288
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EALR 144
Query: 289 YLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y H+ ++HRD+K +L+ + + K+ FG+A LG RV GT ++
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFM 200
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
APE + DV+ GV+L ++G P YG
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YG 235
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 16/216 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEA 223
D + N F ++G G +G V+ + G A+K L A + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 224 IGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ + RH L L Y + R+ V EY N G L L R + E R +
Sbjct: 64 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGA 117
Query: 283 -TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
AL YLH VV+RDIK N+++D++ KI+DFGL K G GT
Sbjct: 118 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGT 173
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
Y+APE D + GVV+ E + GR P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 181 IIGDGGYGVVYRGQL-----MNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+IG G Y V +L + V K+L+N+ D + E + +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW-VQTEKHVFEQASNHPFLVG 85
Query: 236 LGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER- 140
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
+++RD+K N+L+D K++D+G+ K G T+ GT Y+APE
Sbjct: 141 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVD 379
D ++ GV++ E + GR P D
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 181 IIGDGGYGVVYRGQL-----MNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+IG G Y V +L + V K+L+N+ D + E + +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW-VQTEKHVFEQASNHPFLVG 70
Query: 236 LGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER- 125
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
+++RD+K N+L+D K++D+G+ K G T+ GT Y+APE
Sbjct: 126 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVD 379
D ++ GV++ E + GR P D
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 111
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ AG + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 169 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ C L+ E ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQA--LSDEHVQFLVYQLLRGLKY 146
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEY 349
+H A ++HRD+K SN+ ++E+ + +I DFGLA+ T + T Y APE
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRAPEI 199
Query: 350 A-NSGLLNEKSDVYSFGVVLLEAITGR 375
N N+ D++S G ++ E + G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 181 IIGDGGYGVVYRGQL-----MNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+IG G Y V +L + V K+L+N+ D + E + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW-VQTEKHVFEQASNHPFLVG 74
Query: 236 LGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER- 129
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
+++RD+K N+L+D K++D+G+ K G T+ GT Y+APE
Sbjct: 130 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVD 379
D ++ GV++ E + GR P D
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+ +L + + LV E G L ++ R + +I+ +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYV 345
Y H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K +GT Y+
Sbjct: 141 YXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XKDKIGTAYYI 195
Query: 346 APEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQL 399
APE + G +EK DV+S GV+L ++G P + + VE K +L
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 125
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ AG + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 183 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADKDFRVEVE--AIGHV 227
+ F ++G G +G V+ + + +G A+K L + R ++E + V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 228 RHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H +V+L + EG + L+ +++ G+L L ++ T E L A
Sbjct: 88 NHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALG 142
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVA 346
L +LH +++RD+K NIL+DE K++DFGL+K GT Y+A
Sbjct: 143 LDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMA 198
Query: 347 PEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
PE N + +D +S+GV++ E +TG P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 91/223 (40%), Gaps = 27/223 (12%)
Query: 168 DLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D + N F ++G G +G V+ + G A+K L K+ V + + H
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL-------KKEVIVAKDEVAH 56
Query: 227 VRHKN---------LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+N + L Y + R+ V EY N G L L R + E R
Sbjct: 57 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDR 111
Query: 277 MKILLG-TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+ AL YLH E VV+RD+K N+++D++ KI+DFGL K G
Sbjct: 112 ARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 168
Query: 336 TRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
GT Y+APE D + GVV+ E + GR P
Sbjct: 169 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADKDFRVEVEAIGH-- 226
++R+ IG G +GV +LM + VAVK + A V+ E I H
Sbjct: 18 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIAAN---VKREIINHRS 71
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+RH N+VR + T +V EY + G L + + C+ G + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISG 127
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK---LLGAGKSHITTRVMGT 341
++Y H +V HRD+K N L+D + KI DFG +K L KS +GT
Sbjct: 128 VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-----TVGT 179
Query: 342 FGYVAPEYANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
Y+APE + K +DV+S GV L + G YP +
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 181 IIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+IG G +G VY G+ A+ + + + K F+ EV A RH+N+V +G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
++ L +R + L +I K + YLH ++H
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILH 153
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLLG---AGKSHITTRVM-GTFGYVAPEYA------ 350
+D+KS N+ D N I+DFGL + G AG+ R+ G ++APE
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 351 ---NSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ ++ SDV++ G + E +P
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 33/296 (11%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGH 226
S T+ + IG G + VV R +L G A K ++N + +D ++E EA
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAK-IINTKKLSARDHQKLEREARICRL 59
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
++H N+VRL E LV++ V G L + D+ R Y + + +A
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILEA 115
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDA---KISDFGLAKLLGAGKSHITTRVMGTFG 343
+ + H+ VVHRD+K N+L+ K++DFGLA + G GT G
Sbjct: 116 VLHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 344 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRR-S 402
Y++PE + D+++ GV+L + G YP + Q K+ Q++ +
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG-YPPFWDEDQH--------KLYQQIKAGA 222
Query: 403 EDVVDPNIET-RPSTSALKRALLT---ALRCVDPDSDKRPKMSQ---VVRMLESEE 451
D P +T P L +LT A R ++ K P + Q V M+ +E
Sbjct: 223 YDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQE 278
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKN- 231
N F ++G G +G V+ + G A+K L K+ V + + H +N
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL-------KKEVIVAKDEVAHTLTENR 203
Query: 232 --------LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ L Y + R+ V EY N G L L R + E R +
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 258
Query: 283 -TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
AL YLH E VV+RD+K N+++D++ KI+DFGL K G GT
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGT 315
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
Y+APE D + GVV+ E + GR P
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 27/216 (12%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKN- 231
N F ++G G +G V+ + G A+K L K+ V + + H +N
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL-------KKEVIVAKDEVAHTLTENR 200
Query: 232 --------LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ L Y + R+ V EY N G L L R + E R +
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 255
Query: 283 -TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
AL YLH E VV+RD+K N+++D++ KI+DFGL K G GT
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGT 312
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
Y+APE D + GVV+ E + GR P
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAV--AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
++ +N IG G +G V + + GT + A KK+ + F+ E+E + + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL + T LV E G L + + + R + +A +I+ A+AY H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDA-ARIMKDVLSAVAYCHKL 125
Query: 294 IEPKVVHRDIKSSNIL-IDENFDA--KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V HRD+K N L + ++ D+ K+ DFGLA GK T +GT YV+P+
Sbjct: 126 ---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVL 180
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
GL + D +S GV++ + G P
Sbjct: 181 E-GLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 68 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 121
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 177
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKN- 231
N F ++G G +G V+ + G A+K L K+ V + + H +N
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL-------KKEVIVAKDEVAHTLTENR 60
Query: 232 --------LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ L Y + R+ V EY N G L L R + E R +
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 115
Query: 283 -TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
AL YLH E VV+RD+K N+++D++ KI+DFGL K G GT
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGT 172
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
Y+APE D + GVV+ E + GR P
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAV--AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
++ +N IG G +G V + + GT + A KK+ + F+ E+E + + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL + T LV E G L + + + R + +A +I+ A+AY H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDA-ARIMKDVLSAVAYCHKL 142
Query: 294 IEPKVVHRDIKSSNIL-IDENFDA--KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V HRD+K N L + ++ D+ K+ DFGLA GK + T+V GT YV+P+
Sbjct: 143 ---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV-GTPYYVSPQVL 197
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
GL + D +S GV++ + G P
Sbjct: 198 E-GLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK---LLGAGKSHITTRVMGTFGYVAP 347
+V HRD+K N L+D + KI FG +K L KS +GT Y+AP
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS-----TVGTPAYIAP 185
Query: 348 EYANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
E + K +DV+S GV L + G YP +
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKN- 231
N F ++G G +G V+ + G A+K L K+ V + + H +N
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL-------KKEVIVAKDEVAHTLTENR 61
Query: 232 --------LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ L Y + R+ V EY N G L L R + E R +
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 116
Query: 283 -TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
AL YLH E VV+RD+K N+++D++ KI+DFGL K G GT
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGT 173
Query: 342 FGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPV 378
Y+APE D + GVV+ E + GR P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 41/252 (16%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVR-HKNLVRLL 236
+G G YG+V++ G VAVKK+ + N A + FR E+ + + H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
R LV++Y+ +L +R ++ + + + ++ K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVH-----KQYVVYQLIKVIKYLHSG- 128
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK--------------------SHI 334
++HRD+K SNIL++ K++DFGL++ + I
Sbjct: 129 --GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 335 TTRVMGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWL 393
T + T Y APE S + D++S G +L E + G+ P+ G S +N +E +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PIFPG--SSTMNQLERI 243
Query: 394 KMMVQLRRSEDV 405
++ +EDV
Sbjct: 244 IGVIDFPSNEDV 255
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAP 347
YLH VV+RDIK N+++D++ KI+DFGL K G GT Y+AP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
Query: 348 EYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
E D + GVV+ E + GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +GVV+R V V K +N P DK + E+ + + H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPKVV 299
+ + +L+ E+++ G L + + Y EA + + + L ++HE +V
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEH---SIV 171
Query: 300 HRDIKSSNILID--ENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNE 357
H DIK NI+ + + KI DFGLA L + I T + APE + +
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGF 229
Query: 358 KSDVYSFGVVLLEAITGRYP 377
+D+++ GV+ ++G P
Sbjct: 230 YTDMWAIGVLGYVLLSGLSP 249
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
T GT Y PE+ + +S V+S G++L + + G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E + Q L + +RG L E +A+ + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 132 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 64 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 258 EQWLRG-------------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+LR D D L + A+ +A+L
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NC 179
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT-RVMGTFGYVAPEYANSGLLNE 357
+HRD+ + N+L+ AKI DFGLA+ + ++I ++APE +
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 358 KSDVYSFGVVLLEAIT 373
+SDV+S+G++L E +
Sbjct: 240 QSDVWSYGILLWEIFS 255
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
VHR++K N+L+ K++DFGLA + S GT GY++PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 356 NEKSDVYSFGVVLLEAITGRYP 377
++ D+++ GV+L + G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
T GT Y PE+ + +S V+S G++L + + G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVIC 138
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
LH+ +VHRD+K NIL+D++ + K++DFG + L G+ V GT Y+APE
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 193
Query: 349 YANSGL------LNEKSDVYSFGVVLLEAITGRYP 377
+ ++ D++S GV++ + G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 45/293 (15%)
Query: 182 IGDGGYGVVYRGQ--------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+G G + +++G ++ T V +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY-LHE 292
G C G + ILV E+V G+L+ +L+ + + + W+ L AK LA+ +H
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNK-NCINILWK------LEVAKQLAWAMHF 128
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR----VMGTFGYVAPE 348
E ++H ++ + NIL+ D K + KL G S IT + +V PE
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPE 187
Query: 349 -YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVD 407
N LN +D +SFG L E +G +P S ++ L+
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGG-----DKPLSALDSQRKLQFY----------- 231
Query: 408 PNIETRPSTSALKRALLTAL--RCVDPDSDKRPKMSQVVRMLESEEYP--IPR 456
E R A K A L L C+D + D RP ++R L S P +PR
Sbjct: 232 ---EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 73 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 125
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
VHR++K N+L+ K++DFGLA + S GT GY++PE
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 356 NEKSDVYSFGVVLLEAITGRYP 377
++ D+++ GV+L + G P
Sbjct: 184 SKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
VHR++K N+L+ K++DFGLA + S GT GY++PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 356 NEKSDVYSFGVVLLEAITGRYP 377
++ D+++ GV+L + G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVIC 125
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
LH+ +VHRD+K NIL+D++ + K++DFG + L G+ V GT Y+APE
Sbjct: 126 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 180
Query: 349 YANSGL------LNEKSDVYSFGVVLLEAITGRYP 377
+ ++ D++S GV++ + G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNP-GQADKDFRVEVE-AIGHVRHKNLVRLLGY 238
+G G YGVV + + + +G +AVK++ Q K ++++ ++ V V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM-KILLGTAKALAYLHEAIEPK 297
+ E ++ +L+++ + + D+G E + KI + KAL +LH +
Sbjct: 75 LFREGDVWICMELMDT-SLDKFYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL--- 354
V+HRD+K SN+LI+ K+ DFG++ L + G Y+APE N L
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPELNQK 188
Query: 355 -LNEKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLV 390
+ KSD++S G+ ++E R+P D +G P ++ V
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 181 IIGDGGYGVVYRGQLMNGTA--VAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G G +G V GT A+K L + D D VE + + +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 236 LGYCIEGTQRI-LVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKILLGTAKALAYLHE 292
L C + R+ V EYVN G+L ++ G + + + A + I L +LH+
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFLHK 138
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR-VMGTFGYVAPEYAN 351
+++RD+K N+++D KI+DFG+ K +TTR GT Y+APE
Sbjct: 139 R---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 352 SGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ D +++GV+L E + G+ P D
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
T GT Y PE+ + +S V+S G++L + + G P ++
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVIC 138
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPE 348
LH+ +VHRD+K NIL+D++ + K++DFG + L G+ V GT Y+APE
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPE 193
Query: 349 YANSGL------LNEKSDVYSFGVVLLEAITGRYP 377
+ ++ D++S GV++ + G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 182 IGDGGYGVVYRGQ--------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+G G + +++G ++ T V +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C+ G + ILV E+V G+L+ +L+ ++ + ++++ A A+ +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR----VMGTFGYVAPE- 348
++H ++ + NIL+ D K + KL G S IT + +V PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPEC 188
Query: 349 YANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDP 408
N LN +D +SFG L E +G +P S ++ L+
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGG-----DKPLSALDSQRKLQFY------------ 231
Query: 409 NIETRPSTSALKRALLTAL--RCVDPDSDKRPKMSQVVRMLESEEYP--IPR 456
E R A K A L L C+D + D RP ++R L S P +PR
Sbjct: 232 --EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAKLLGAGKSHITTR-VMGTFGYVAPEY 349
+V HRD+K N L+D + KI FG +K + H + +GT Y+APE
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEV 187
Query: 350 ANSGLLNEK-SDVYSFGVVLLEAITGRYPVD 379
+ K +DV+S GV L + G YP +
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 139
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 140 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 193
Query: 336 TRVMGTFGYVAPEYANSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
T GT Y PE+ + +S V+S G++L + + G P ++
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 75 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 132 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 157 HLGWGHWFTLRDLQSATNR--FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD 214
+L W FT + Q +R F +IG G +G V +L N V K+LN
Sbjct: 55 YLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK 114
Query: 215 KD----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-------EQWLRG 263
+ FR E + + + K + L + LV +Y G+L E L
Sbjct: 115 RAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE 174
Query: 264 DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG- 322
+M R YL A M I + + L Y VHRDIK NIL+D N +++DFG
Sbjct: 175 EMA-RFYL---AEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGS 221
Query: 323 LAKLLGAGKSHITTRVMGTFGYVAPEYANS-----GLLNEKSDVYSFGVVLLEAITGRYP 377
KL+ G + V GT Y++PE + G + D +S GV + E + G P
Sbjct: 222 CLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G Y V R + T + + + + D +E+ + + +H N++ L +
Sbjct: 30 IGVGSYSVCKRC-IHKATNMEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNIITLKDVYDD 87
Query: 242 GTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
G +V E + G L ++ LR + + + +L K + YLH VVH
Sbjct: 88 GKYVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQ---GVVH 139
Query: 301 RDIKSSNIL-IDENFDA---KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
RD+K SNIL +DE+ + +I DFG AK L A + T T +VAPE +
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYD 198
Query: 357 EKSDVYSFGVVLLEAITGRYPVDYG 381
D++S GV+L +TG P G
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANG 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+R + G AVKK+ +A+ E+ A + +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKVV 299
EG + E + G+L Q ++ ++G L E R LG A + L YLH +++
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVK----EQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 207
Query: 300 HRDIKSSNILID-ENFDAKISDFGLAKLL---GAGKSHIT-TRVMGTFGYVAPEYANSGL 354
H D+K+ N+L+ + A + DFG A L G GKS +T + GT ++APE
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 355 LNEKSDVYSFGVVLLEAITGRYP 377
+ K DV+S ++L + G +P
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 90 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 147 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 200
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 34 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ T + GT Y+APE
Sbjct: 139 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 193
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 90 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 147 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 200
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ T + GT Y+APE
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 189
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 91 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ T + GT Y+APE
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 189
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 171 SATNRFSKD----NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA-- 223
+ RF+ D +G G + VV R T K++N + +D ++E EA
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
++H N+VRL E LV++ V G L + D+ R Y + +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIHQI 139
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFD---AKISDFGLAKLLGAGKSHITTRVMG 340
+++ ++H+ +VHRD+K N+L+ K++DFGLA + G+ G
Sbjct: 140 LESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAG 195
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
T GY++PE + D+++ GV+L + G YP
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG-YP 231
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 110 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 167 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 220
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 32/274 (11%)
Query: 182 IGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC- 239
+ + G +++G+ N V V K+ + + +DF E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 240 -IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPK 297
L+ ++ G+L L ++ +++ +K L A+ +A+LH +EP
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLH-TLEPL 133
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL--L 355
+ + S +++IDE+ A+IS + S + M +VAPE
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDT 187
Query: 356 NEKS-DVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRP 414
N +S D++SF V+L E +T P ++++ +E + M V L + P I P
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPF------ADLSNME-IGMKVALEGLRPTIPPGIS--P 238
Query: 415 STSALKRALLTALRCVDPDSDKRPKMSQVVRMLE 448
S L + C++ D KRPK +V +LE
Sbjct: 239 HVSKLMKI------CMNEDPAKRPKFDMIVPILE 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 32/264 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-----FRVEVEAIGHVRHKNLVRLL 236
IG G +G V Q + + K +N +++ F+ E++ + + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLEHPFLVNLW 81
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ +V + + G+L L+ ++ + E + AL YL
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ--- 134
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS---G 353
+++HRD+K NIL+DE+ I+DF +A +L ++ ITT + GT Y+APE +S
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MAGTKPYMAPEMFSSRKGA 192
Query: 354 LLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETR 413
+ D +S GV E + GR P S +V + V V P+ ++
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-------VTYPSAWSQ 245
Query: 414 PSTSALKRALLTALRCVDPDSDKR 437
S LK+ L +P+ D+R
Sbjct: 246 EMVSLLKKLL-------EPNPDQR 262
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 175 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL----EQWLRGDMCDRGYL 271
DF+ E++ I ++++ + G + ++YEY+ N ++ E + D ++
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 272 TWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ I+ + +Y+H E + HRD+K SNIL+D+N K+SDFG ++ + K
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 332 SHITTRVMGTFGYVAPE-YANSGLLN-EKSDVYSFGVVL 368
GT+ ++ PE ++N N K D++S G+ L
Sbjct: 207 ---IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 123 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 180 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 233
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 104 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 103 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 175 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 74 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 131 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 184
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAI-GHVRHKNLVRLLGYC 239
IG G Y V R AVK + ++ +D E+E + + +H N++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVY 85
Query: 240 IEGTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+G +V E G L ++ LR + + + +L K + YLH V
Sbjct: 86 DDGKYVYVVTELXKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQ---GV 137
Query: 299 VHRDIKSSNIL-IDENFDA---KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGL 354
VHRD+K SNIL +DE+ + +I DFG AK L A + T T +VAPE
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQG 196
Query: 355 LNEKSDVYSFGVVLLEAITGRYPVDYG 381
+ D++S GV+L +TG P G
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANG 223
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H N++ L +G LV E + G L ++ LR + + + +L K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR-----QKFFSEREASFVLHTIGKT 133
Query: 287 LAYLHEAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAKLLGAGKSHITTRVMGTF 342
+ YLH VVHRD+K SNIL +DE+ + +I DFG AK L A + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
+VAPE +E D++S G++L + G P G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R +++ G A K + A ++E EA ++H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E L+++ V G L + D+ R Y + + +A+ + H+ V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM---GV 142
Query: 299 VHRDIKSSNILIDENFDA---KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
VHRD+K N+L+ K++DFGLA + G+ GT GY++PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 356 NEKSDVYSFGVVLLEAITGRYP 377
+ D+++ GV+L + G YP
Sbjct: 202 GKPVDLWACGVILYILLVG-YP 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H N++ L +G LV E + G L ++ LR + + + +L K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR-----QKFFSEREASFVLHTIGKT 133
Query: 287 LAYLHEAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAKLLGAGKSHITTRVMGTF 342
+ YLH VVHRD+K SNIL +DE+ + +I DFG AK L A + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYG 381
+VAPE +E D++S G++L + G P G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
V+HRDIK NILID N + K+ DFG LL K + T GT Y PE+
Sbjct: 128 NX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 351 NSGLLNEKS-DVYSFGVVLLEAITGRYPVDY 380
+ +S V+S G++L + + G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 171
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHITT-RVMGTFGYVAPEYANSG 353
+H D+K+ N+L+ + A + DFG A L G GKS +T + GT ++APE
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 354 LLNEKSDVYSFGVVLLEAITGRYP 377
+ K D++S ++L + G +P
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 187
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHITT-RVMGTFGYVAPEYANSG 353
+H D+K+ N+L+ + A + DFG A L G GKS +T + GT ++APE
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 354 LLNEKSDVYSFGVVLLEAITGRYP 377
+ K D++S ++L + G +P
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 185
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHITT-RVMGTFGYVAPEYANSG 353
+H D+K+ N+L+ + A + DFG A L G GKS +T + GT ++APE
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 354 LLNEKSDVYSFGVVLLEAITGRYP 377
+ K D++S ++L + G +P
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 52 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ + GT Y+APE
Sbjct: 157 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVL 211
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 54 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 158
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ + GT Y+APE
Sbjct: 159 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVL 213
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 54 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 112
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 113 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
Query: 327 LGAGKSHITTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
L G++ + + GT Y+APE + N D +S GV+L ++G P R
Sbjct: 166 L--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
Query: 384 Q 384
Q
Sbjct: 224 Q 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+R + G AVKK+ +A+ E+ A + +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKVV 299
EG + E + G+L Q ++ ++G L E R LG A + L YLH +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVK----EQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 188
Query: 300 HRDIKSSNILID-ENFDAKISDFGLAKLL---GAGKSHIT-TRVMGTFGYVAPEYANSGL 354
H D+K+ N+L+ + A + DFG A L G GK +T + GT ++APE
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 355 LNEKSDVYSFGVVLLEAITGRYP 377
+ K DV+S ++L + G +P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 61 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 119
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 120 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
Query: 327 LGAGKSHITTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
L G++ + + GT Y+APE + N D +S GV+L ++G P R
Sbjct: 173 L--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
Query: 384 Q 384
Q
Sbjct: 231 Q 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LGAGKSHITTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
L G++ + + GT Y+APE + N D +S GV+L ++G P R
Sbjct: 167 L--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 384 Q 384
Q
Sbjct: 225 Q 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LGAGKSHITTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
L G++ + + GT Y+APE + N D +S GV+L ++G P R
Sbjct: 167 L--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 384 Q 384
Q
Sbjct: 225 Q 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LGAGKSHITTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
L G++ + + GT Y+APE + N D +S GV+L ++G P R
Sbjct: 167 L--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 384 Q 384
Q
Sbjct: 225 Q 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRLLGY 238
++G+G Y V L NG AVK + G + EVE + + +KN++ L+ +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ T+ LV+E + G++ ++ + + +++ A AL +LH +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQ----KQKHFNEREASRVVRDVAAALDFLHTK---GI 132
Query: 299 VHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSH--ITTRVM----GTFGYVAPEY 349
HRD+K NIL ++ KI DF L + S ITT + G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 350 A-----NSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ +++ D++S GVVL ++G P
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK 278
E+E + + H ++++ + + +V E + G L + G+ + EA K
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCK 242
Query: 279 ILL-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHI 334
+ A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+L G++ +
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL 297
Query: 335 TTRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQ 384
+ GT Y+APE + N D +S GV+L ++G P R Q
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 28 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 132
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYA 350
+V+HRD+K N+ ++E+ + KI DFGLA K+ G+ + GT Y+APE
Sbjct: 133 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVL 187
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ + + DV+S G ++ + G+ P +
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+E + + H ++++ + + +V E + G L + G+ + EA K+
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK-----EATCKL 257
Query: 280 LL-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHIT 335
A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+L G++ +
Sbjct: 258 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 312
Query: 336 TRVMGTFGYVAPEY---ANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQ 384
+ GT Y+APE + N D +S GV+L ++G P R Q
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 364
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 169 LQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAI 224
Q ++R+ + +G G YG V+ + G A+K + + + EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEARMK-ILL 281
+ H N+++L + + LV E G L E LR + + MK +L
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVLS 132
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDA--KISDFGLAKLLGAGKSHITTRV 338
GT YLH+ +VHRD+K N+L++ ++ DA KI DFGL+ G
Sbjct: 133 GTT----YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKER 183
Query: 339 MGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
+GT Y+APE +EK DV+S GV+L + G YP G+ E+
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG-YPPFGGQTDQEI 230
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADK------DFRVEVEAIGHVRHKNLVR 234
+G G + +V + + G A K + +A + + EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +L+ E V+ G L +L + L+ E + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 295 EPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
K+ H D+K NI L+D+N K+ DFGLA + G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ K++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 107/268 (39%), Gaps = 60/268 (22%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGT-AVAVKKLLN-------NPGQAD 214
+F L ++ IG G YGVV R + N T A+ K++N NP +
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVE 73
Query: 215 KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL------------- 261
+ + EV + + H N+ RL + LV E + G+L L
Sbjct: 74 R-IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 262 ---RGDMCD----------------RGYLTWEARMKILLGTAK----ALAYLHEAIEPKV 298
+ +C R L + R K++ + AL YLH +
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GI 189
Query: 299 VHRDIKSSNILIDEN--FDAKISDFGLAK---LLGAGKSHITTRVMGTFGYVAPEYANSG 353
HRDIK N L N F+ K+ DFGL+K L G+ + T GT +VAPE N+
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 354 LLNE----KSDVYSFGVVLLEAITGRYP 377
NE K D +S GV+L + G P
Sbjct: 250 --NESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+RF + + G G +G V G + G +VA+KK++ +P +++ ++ ++ + + H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNI 81
Query: 233 VRLLGYCIEGTQRI-------LVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-----MKIL 280
V+L Y +R +V EYV + L + C R Y + +K+
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHR------CCRNYYRRQVAPPPILIKVF 134
Query: 281 L-GTAKALAYLHEAIEPKVVHRDIKSSNILIDE-NFDAKISDFGLAKLLGAGKSHITTRV 338
L +++ LH V HRDIK N+L++E + K+ DFG AK L + ++
Sbjct: 135 LFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--Y 191
Query: 339 MGTFGYVAPE--YANSGLLNEKSDVYSFGVVLLEAITG 374
+ + Y APE + N D++S G + E + G
Sbjct: 192 ICSRYYRAPELIFGNQH-YTTAVDIWSVGCIFAEMMLG 228
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 213 ADKDFRVEVEAIGHVRHKNLVRLLG--YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
+ + + E++ + +RHKN+++L+ Y E + +V EY G Q + + ++ +
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRF 106
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
+A L YLH +VH+DIK N+L+ KIS G+A+ L
Sbjct: 107 PVCQAH-GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 331 KSHITTRV-MGTFGYVAPEYAN-----SGLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ T R G+ + PE AN SG K D++S GV L TG YP +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGF---KVDIWSAGVTLYNITTGLYPFE 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADK------DFRVEVEAIGHVRHKNLVR 234
+G G + +V + + G A K + +A + + EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +L+ E V+ G L +L + L+ E + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 295 EPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
K+ H D+K NI L+D+N K+ DFGLA + G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADK------DFRVEVEAIGHVRHKNLVR 234
+G G + +V + + G A K + +A + + EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +L+ E V+ G L +L + L+ E + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 295 EPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
K+ H D+K NI L+D+N K+ DFGLA + G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + V H N++ L T +L+ E V+ G L +L +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKES 111
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKL 326
L+ E + + YLH K+ H D+K NI L+D+N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 327 LGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
+ G + GT +VAPE N L ++D++S GV+ ++G P
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADK------DFRVEVEAIGHVRHKNLVR 234
+G G + +V + + G A K + +A + + EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +L+ E V+ G L +L + L+ E + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 295 EPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
K+ H D+K NI L+D+N K+ DFGLA + G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADK------DFRVEVEAIGHVRHKNLVR 234
+G G + +V + + G A K + +A + + EV + V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +L+ E V+ G L +L + L+ E + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 295 EPKVVHRDIKSSNI-LIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYA 350
K+ H D+K NI L+D+N K+ DFGLA + G + GT +VAPE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 351 NSGLLNEKSDVYSFGVVLLEAITGRYP 377
N L ++D++S GV+ ++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
KI + KAL +LH + V+HRD+K SN+LI+ K DFG++ L +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 338 VMGTFGYVAPEYANSGL----LNEKSDVYSFGVVLLEAITGRYPVD-YGRPQSEVNLV 390
G Y APE N L + KSD++S G+ +E R+P D +G P ++ V
Sbjct: 197 -AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY+ G++ LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ K++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY+ G++ LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ K++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 182 IGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G G + VV R GQ + KKL + + E ++H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRL 75
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
E L+++ V G L + D+ R Y + + +A+ + H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM-- 129
Query: 296 PKVVHRDIKSSNILIDENFDA---KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
VVHR++K N+L+ K++DFGLA + G+ GT GY++PE
Sbjct: 130 -GVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYP 377
+ D+++ GV+L + G YP
Sbjct: 188 DPYGKPVDLWACGVILYILLVG-YP 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 76 HENVVNLIEIC-----RTKASPY-NRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 339 MG---TFGYVAPEYANSGLLNEKS-----DVYSFGVVLLEAITGRYPVDYGRP-QSEVNL 389
T Y PE LL E+ D++ G ++ E T R P+ G Q ++ L
Sbjct: 187 XNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
Query: 390 VEWL 393
+ L
Sbjct: 242 ISQL 245
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD----FRVEV 221
+R LQ + +IG G +G V + V KLL+ + F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
+ + +V+L + +V EY+ G+L + D+ ++ + A + +
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVM 339
L ++ ++HRD+K N+L+D++ K++DFG K+ G H T V
Sbjct: 187 LDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 340 GTFGYVAPEYANS----GLLNEKSDVYSFGVVLLEAITGRYP 377
GT Y++PE S G + D +S GV L E + G P
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAIGHVR 228
++R+ + +G G YG V+ + G A+K + + + EV + +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEARMK-ILLGTAK 285
H N+++L + + LV E G L E LR + + MK +L GT
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVLSGTT- 118
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILID-ENFDA--KISDFGLAKLLGAGKSHITTRVMGTF 342
YLH+ +VHRD+K N+L++ ++ DA KI DFGL+ G +GT
Sbjct: 119 ---YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTA 170
Query: 343 GYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
Y+APE +EK DV+S GV+L + G YP G+ E+
Sbjct: 171 YYIAPEVLRKK-YDEKCDVWSCGVILYILLCG-YPPFGGQTDQEI 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVM 339
L ++ + +HRD+K N+L+D++ K++DFG K+ G T V
Sbjct: 181 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 230
Query: 340 GTFGYVAPEYANS----GLLNEKSDVYSFGVVLLEAITGRYP 377
GT Y++PE S G + D +S GV L E + G P
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 76 HENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 339 MG---TFGYVAPEYANSGLLNEKS-----DVYSFGVVLLEAITGRYPVDYGRP-QSEVNL 389
T Y PE LL E+ D++ G ++ E T R P+ G Q ++ L
Sbjct: 187 XNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
Query: 390 VEWL 393
+ L
Sbjct: 242 ISQL 245
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 178 KDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRL 235
+++++G+G + V L+ AVK + PG EVE + + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ + E + LV+E + G++ + R + EA + ++ A AL +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASV-VVQDVASALDFLHNK-- 130
Query: 296 PKVVHRDIKSSNILID---ENFDAKISDFGLA---KLLGAGKSHITTRVM---GTFGYVA 346
+ HRD+K NIL + + KI DFGL KL G T ++ G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 347 PEYA-----NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
PE + + +++ D++S GV+L ++G YP GR S+
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-YPPFVGRCGSDC 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI---TTRVMGTFGYVAPEYANSG 353
K +HRD+ + NIL+ EN KI DFGLA+ + ++ TR+ ++APE
Sbjct: 219 KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDK 276
Query: 354 LLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIET 412
+ + KSDV+S+GV+L E + G P Y Q + + L+ +++R E
Sbjct: 277 IYSTKSDVWSYGVLLWEIFSLGGSP--YPGVQMDEDFCSRLREGMRMRAPEY-------- 326
Query: 413 RPSTSALKRALLTALRCVDPDSDKRPKMSQVVRML 447
ST + + +L C D +RP+ +++V L
Sbjct: 327 --STPEIYQIMLD---CWHRDPKERPRFAELVEKL 356
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVM 339
L ++ + +HRD+K N+L+D++ K++DFG K+ G T V
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 340 GTFGYVAPEYANS----GLLNEKSDVYSFGVVLLEAITGRYP 377
GT Y++PE S G + D +S GV L E + G P
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVM 339
L ++ + +HRD+K N+L+D++ K++DFG K+ G T V
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 340 GTFGYVAPEYANS----GLLNEKSDVYSFGVVLLEAITGRYP 377
GT Y++PE S G + D +S GV L E + G P
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHV 227
S T+ + +G G + VV R + K++N + +D ++E EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+H N+VRL E LV++ V G L + D+ R Y + + +++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESV 116
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ H +VHRD+K N+L+ + K++DFGLA + G GT GY
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
++PE + D+++ GV+L + G P
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 17 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 69
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LIDE +++DFG AK +
Sbjct: 130 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 181 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 181 IIGDGGYGVVYRGQLMNGT--AVAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G G +G V + GT AVK L + D D VE + +
Sbjct: 348 VLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 236 LGYCIEGTQRI-LVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKILLGTAKALAYLHE 292
L C + R+ V EYVN G+L ++ G + + + A + I L +L
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQS 460
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANS 352
+++RD+K N+++D KI+DFG+ K T GT Y+APE
Sbjct: 461 K---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 353 GLLNEKSDVYSFGVVLLEAITGRYPVD 379
+ D ++FGV+L E + G+ P +
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 74
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 75 HENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 129 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 339 MG---TFGYVAPEYANSGLLNEKS-----DVYSFGVVLLEAITGRYPVDYGRP-QSEVNL 389
T Y PE LL E+ D++ G ++ E T R P+ G Q ++ L
Sbjct: 186 XNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 240
Query: 390 VEWL 393
+ L
Sbjct: 241 ISQL 244
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 34/224 (15%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTA-VAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+R+ +G GG G+V+ + VA+KK++ Q+ K E++ I + H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 233 VRL--------------LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK 278
V++ +G E +V EY+ ++ ++G L E
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD------LANVLEQGPLLEEHARL 124
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSHITTR 337
+ + L Y+H A V+HRD+K +N+ I+ E+ KI DFGLA+++ SH +
Sbjct: 125 FMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH---K 178
Query: 338 VMGTFGYVAPEYANSGLL------NEKSDVYSFGVVLLEAITGR 375
+ G V Y + LL + D+++ G + E +TG+
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 79
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 138
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 139 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCG 186
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFGLAK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 103
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 164 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 215 A----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR--ILVYEYVNNGNLEQ--WLRGDMCDRGYLTWEA 275
E+ + + H N+V+L+ + + +V+E VN G + + L+ D+ ++
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+K + YLH K++HRDIK SN+L+ E+ KI+DFG++ G +
Sbjct: 146 LIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALL 194
Query: 336 TRVMGTFGYVAPEYANSG--LLNEKS-DVYSFGVVLLEAITGRYP 377
+ +GT ++APE + + + K+ DV++ GV L + G+ P
Sbjct: 195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHV 227
S T+ + +G G + VV R + K++N + +D ++E EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+H N+VRL E LV++ V G L + D+ R Y + + +++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESV 116
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFGY 344
+ H +VHRD+K N+L+ + K++DFGLA + G GT GY
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 345 VAPEYANSGLLNEKSDVYSFGVVLLEAITGRYP 377
++PE + D+++ GV+L + G P
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 76 HENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 339 MG---TFGYVAPEYANSGLLNEKS-----DVYSFGVVLLEAITGRYPVDYGRP-QSEVNL 389
T Y PE LL E+ D++ G ++ E T R P+ G Q ++ L
Sbjct: 187 XNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
Query: 390 VEWL 393
+ L
Sbjct: 242 ISQL 245
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 25/226 (11%)
Query: 170 QSATNR-FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPG---QADKDFRVEVEAIG 225
QS +N + +I+G G V+RG+ + K+ NN D R E E +
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLK 62
Query: 226 HVRHKNLVRLLGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
+ HKN+V+L E T R +L+ E+ G+L L + Y E+ I+L
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVL-- 118
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNIL--IDENFDA--KISDFGLAKLLGAGKSHITTRVM 339
+ ++ E +VHR+IK NI+ I E+ + K++DFG A+ L + ++ +
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LY 176
Query: 340 GTFGYVAPEYANSGLLNEKS--------DVYSFGVVLLEAITGRYP 377
GT Y+ P+ +L + D++S GV A TG P
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 243 TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRD 302
++ IL+ EY G + ++ + ++ ++++ + + YLH+ +VH D
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAEM--VSENDVIRLIKQILEGVYYLHQN---NIVHLD 156
Query: 303 IKSSNILIDENF---DAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKS 359
+K NIL+ + D KI DFG+++ +G +MGT Y+APE N + +
Sbjct: 157 LKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTAT 214
Query: 360 DVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSAL 419
D+++ G++ +T P G E L S+ VD + ET S S L
Sbjct: 215 DMWNIGIIAYMLLTHTSPF-VGEDNQE----------TYLNISQVNVDYSEETFSSVSQL 263
Query: 420 KRALLTALRCVDPDSDKRP 438
+ +L +P +KRP
Sbjct: 264 ATDFIQSLLVKNP--EKRP 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 170 QSATNR-FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPG---QADKDFRVEVEAIG 225
QS +N + +I+G G V+RG+ + K+ NN D R E E +
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLK 62
Query: 226 HVRHKNLVRLLGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
+ HKN+V+L E T R +L+ E+ G+L L + Y E+ I+L
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVL-- 118
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNIL--IDENFDA--KISDFGLAKLLGAGKSHITTRVM 339
+ ++ E +VHR+IK NI+ I E+ + K++DFG A+ L + + +
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LY 176
Query: 340 GTFGYVAPEYANSGLLNEKS--------DVYSFGVVLLEAITGRYP 377
GT Y+ P+ +L + D++S GV A TG P
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKLLNNPGQADKDFR---VEV 221
RD T+ F+ ++G G +G V + GT AVK L + D D VE
Sbjct: 14 RDRMKLTD-FNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEK 71
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMK 278
+ + L C + R+ V EYVN G+L ++ G + + + A +
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 131
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
I L +L +++RD+K N+++D KI+DFG+ K T
Sbjct: 132 I------GLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXF 181
Query: 339 MGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVD 379
GT Y+APE + D ++FGV+L E + G+ P +
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 182 IGDGGYG--VVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
+G G YG ++ R ++ + A+ + + + ++ EV + + H N+++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ LV E G L ++ R I+ + YLH+ +
Sbjct: 105 FEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNI 157
Query: 299 VHRDIKSSNILID-ENFDA--KISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLL 355
VHRD+K N+L++ + DA KI DFGL+ + K +GT Y+APE
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEVLRKKY- 214
Query: 356 NEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
+EK DV+S GV+L + G YP G+ E+
Sbjct: 215 DEKCDVWSIGVILFILLAG-YPPFGGQTDQEI 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 31 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 83
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 144 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 195 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 53/295 (17%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNN------PGQADKDFRV 219
+D ++ + ++G GG+G V+ G L + VA+K + N P +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 220 EVEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
EV + V H ++RLL + +LV E Q L + ++G L E
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPA---QDLFDYITEKGPLG-EG 139
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSHI 334
+ G + +A + VVHRDIK NILID AK+ DFG LL
Sbjct: 140 PSRCFFG--QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEP 194
Query: 335 TTRVMGTFGYVAPEYANSGLLNE-KSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWL 393
T GT Y PE+ + + + V+S G++L + + G P +
Sbjct: 195 YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE-------------- 240
Query: 394 KMMVQLRRSEDVVDPNI----ETRPSTSALKRALLTALRCVDPDSDKRPKMSQVV 444
R +++++ + P AL R RC+ P RP + +++
Sbjct: 241 -------RDQEILEAELHFPAHVSPDCCALIR------RCLAPKPSSRPSLEEIL 282
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL-LNN-----PGQADKDFRVEVEA 223
++ +R+ + +G+G YG VY+ + VA+K++ L + PG A + EV
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSL 86
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
+ ++H+N++ L + L++EY N L+ M ++ L
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQL 141
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILI-----DENFDAKISDFGLAKLLGAGKSHITTRV 338
+ + H + +HRD+K N+L+ E KI DFGLA+ G T +
Sbjct: 142 INGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 339 MGTFGYVAPE-YANSGLLNEKSDVYSFGVVLLEAI--TGRYPVDYGRPQSEVNLVEWLKM 395
+ T Y PE S + D++S + E + T +P D SE++ + K+
Sbjct: 199 I-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD-----SEID--QLFKI 250
Query: 396 MVQLRRSEDVVDPNIETRP 414
L +D P + P
Sbjct: 251 FEVLGLPDDTTWPGVTALP 269
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ +++DFGLAK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--NGTAVAVK-KLLNNPGQADKD---FRV 219
L D+ +F+ ++G G +G V QL +G+ V V K+L A D F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR------ILVYEYVNNGNLEQWLRGDMCDRG--YL 271
E + H ++ +L+G + + +++ ++ +G+L +L L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 272 TWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ ++ ++ A + YL +HRD+ + N ++ E+ ++DFGL++ + +G
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 332 SH---ITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYP 377
+ +++ ++A E L SDV++FGV + E +T G+ P
Sbjct: 192 YYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 103
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 164 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 215 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 25 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 77
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 138 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 189 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 158 LGWGHWFT--LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK 215
L W FT ++++Q F +IG G +G V ++ N + K+LN +
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 216 D----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNL-------EQWLRG 263
FR E + + + + L Y + + LV +Y G+L E L
Sbjct: 116 AETACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 174
Query: 264 DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGL 323
DM R Y+ M + + + L Y VHRDIK N+L+D N +++DFG
Sbjct: 175 DMA-RFYI---GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGS 221
Query: 324 AKLLGAGKSHITTRVMGTFGYVAPEYANS-----GLLNEKSDVYSFGVVLLEAITGRYP 377
+ + ++ +GT Y++PE + G + D +S GV + E + G P
Sbjct: 222 CLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 86
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 145
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 146 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 193
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 158 LGWGHWFT--LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK 215
L W FT ++++Q F +IG G +G V ++ N + K+LN +
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 216 D----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNL-------EQWLRG 263
FR E + + + + L Y + + LV +Y G+L E L
Sbjct: 132 AETACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 190
Query: 264 DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGL 323
DM R Y+ M + + + L Y VHRDIK N+L+D N +++DFG
Sbjct: 191 DMA-RFYI---GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGS 237
Query: 324 AKLLGAGKSHITTRVMGTFGYVAPEYANS-----GLLNEKSDVYSFGVVLLEAITGRYP 377
+ + ++ +GT Y++PE + G + D +S GV + E + G P
Sbjct: 238 CLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 28/275 (10%)
Query: 182 IGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC- 239
+ + G +++G+ N V V K+ + + +DF E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 240 -IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPK 297
L+ + G+L L ++ +++ +K L A+ A+LH +EP
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGT---NFVVDQSQAVKFALDXARGXAFLH-TLEPL 133
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLA-KLLGAGKSHITTRVMGTFGYVAPEYANSGLLN 356
+ + S ++ IDE+ A+IS + G+ + V PE N
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN----R 189
Query: 357 EKSDVYSFGVVLLEAITGRYPVDYGRPQSEVNLVEWLKMMVQLRRSEDVVDPNIETRPST 416
+D +SF V+L E +T P ++++ E + V L + P I P
Sbjct: 190 RSADXWSFAVLLWELVTREVPF------ADLSNXE-IGXKVALEGLRPTIPPGIS--PHV 240
Query: 417 SALKRALLTALRCVDPDSDKRPKMSQVVRMLESEE 451
S L + C + D KRPK +V +LE +
Sbjct: 241 SKLXKI------CXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Query: 178 KDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRL 235
+++++G+G + V L+ AVK + PG EVE + + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ + E + LV+E + G++ + R + EA + ++ A AL +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASV-VVQDVASALDFLHNK-- 130
Query: 296 PKVVHRDIKSSNILID---ENFDAKISDFGLA---KLLGAGKSHITTRVM---GTFGYVA 346
+ HRD+K NIL + + KI DF L KL G T ++ G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 347 PEYA-----NSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRPQSEV 387
PE + + +++ D++S GV+L ++G YP GR S+
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-YPPFVGRCGSDC 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 114
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 173
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 174 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 221
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N++ID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 86
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 145
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ +++DFG AK + T + G
Sbjct: 146 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCG 193
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ A++ + YLH +++RD+K N+LID+ +++DFG AK +
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 330 GKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T + GT Y+APE S N+ D ++ GV++ + G P +P
Sbjct: 194 R----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ +++DFG AK + T + G
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCG 200
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N+LID+ K++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V L +L + + +V EY G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V L +L + + +V EY G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 151
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 210 SLGVIMYILLCG-YPPFYS 227
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 159
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 363 SFGVVLLEAITGRYPVDY 380
S GV++ + G YP Y
Sbjct: 218 SLGVIMYILLCG-YPPFY 234
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 195
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 253
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 254 SLGVIMYILLCG-YPPFYS 271
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 149
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 207
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 208 SLGVIMYILLCG-YPPFYS 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 189
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 247
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 248 SLGVIMYILLCG-YPPFYS 265
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V L +L + + +V EY G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
YLH +++RD+K N++ID+ K++DFG AK + T + G
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCG 201
Query: 341 TFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYGRP 383
T Y+APE S N+ D ++ GV++ E G P +P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 150
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 208
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 209 SLGVIMYILLCG-YPPFYS 226
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +LT E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 328 GAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQS 385
++ ++APE + +SDV+SFGV+L E + G P Y +
Sbjct: 249 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKI 306
Query: 386 EVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+ LK ++ R+ D P + T L C + +RP S++V
Sbjct: 307 DEEFCRRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVE 353
Query: 446 ML 447
L
Sbjct: 354 HL 355
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 143
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 201
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 202 SLGVIMYILLCG-YPPFYS 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
++V E ++ G L ++ D D+ + EA +I+ +A+ YLH + HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQ-DRGDQAFTEREAS-EIMKSIGEAIQYLHSI---NIAHRDVKP 145
Query: 306 SNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVY 362
N+L N K++DFG AK + S +TT + YVAPE ++ D++
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMW 203
Query: 363 SFGVVLLEAITGRYPVDYG 381
S GV++ + G YP Y
Sbjct: 204 SLGVIMYILLCG-YPPFYS 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +LT E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 250
Query: 328 GAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQS 385
++ ++APE + +SDV+SFGV+L E + G P Y +
Sbjct: 251 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKI 308
Query: 386 EVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+ LK ++ R+ D P + T L C + +RP S++V
Sbjct: 309 DEEFCRRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVE 355
Query: 446 ML 447
L
Sbjct: 356 HL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +LT E + AK + +L K +HRD+ + NIL+ E KI DFGLA+ +
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 328 GAGKSHITT-RVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAIT-GRYPVDYGRPQS 385
++ ++APE + +SDV+SFGV+L E + G P Y +
Sbjct: 242 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPGVKI 299
Query: 386 EVNLVEWLKMMVQLRRSEDVVDPNIETRPSTSALKRALLTALRCVDPDSDKRPKMSQVVR 445
+ LK ++ R+ D P + T L C + +RP S++V
Sbjct: 300 DEEFCRRLKEGTRM-RAPDYTTPEMYQ------------TMLDCWHGEPSQRPTFSELVE 346
Query: 446 ML 447
L
Sbjct: 347 HL 348
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,061,406
Number of Sequences: 62578
Number of extensions: 661987
Number of successful extensions: 4190
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 1507
Number of HSP's gapped (non-prelim): 1145
length of query: 498
length of database: 14,973,337
effective HSP length: 103
effective length of query: 395
effective length of database: 8,527,803
effective search space: 3368482185
effective search space used: 3368482185
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)