Query 010895
Match_columns 498
No_of_seqs 178 out of 858
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 6E-124 2E-128 987.7 43.6 443 35-493 15-465 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 1E-120 4E-125 955.7 41.7 434 40-494 5-442 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 1E-118 4E-123 953.7 46.2 448 32-494 18-475 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 5E-108 2E-112 871.2 44.9 440 34-492 5-450 (451)
5 2yhx_A Hexokinase B; transfera 100.0 2E-103 7E-108 835.1 44.3 436 38-495 6-449 (457)
6 1cza_N Hexokinase type I; stru 100.0 1E-101 4E-106 884.0 46.0 441 39-495 468-914 (917)
7 1cza_N Hexokinase type I; stru 100.0 1.4E-87 4.7E-92 768.1 40.1 440 36-493 17-464 (917)
8 2qm1_A Glucokinase; alpha-beta 99.9 5.3E-25 1.8E-29 223.1 27.9 308 94-487 5-320 (326)
9 3vgl_A Glucokinase; ROK family 99.9 5.2E-25 1.8E-29 223.8 26.4 301 95-486 2-310 (321)
10 1z05_A Transcriptional regulat 99.9 3.1E-24 1.1E-28 226.5 31.9 342 44-487 59-414 (429)
11 1z6r_A MLC protein; transcript 99.9 2.1E-24 7.2E-29 226.0 29.1 346 43-486 35-391 (406)
12 2hoe_A N-acetylglucosamine kin 99.9 1.2E-23 4E-28 218.8 26.1 325 43-487 38-370 (380)
13 3vov_A Glucokinase, hexokinase 99.9 1.3E-23 4.4E-28 211.9 24.0 287 96-487 2-294 (302)
14 4db3_A Glcnac kinase, N-acetyl 99.9 6.7E-23 2.3E-27 208.9 25.8 293 96-486 25-324 (327)
15 3r8e_A Hypothetical sugar kina 99.9 4.9E-23 1.7E-27 209.3 22.3 295 92-486 16-317 (321)
16 2ap1_A Putative regulator prot 99.9 6E-23 2E-27 208.7 21.9 290 95-486 24-324 (327)
17 2yhw_A Bifunctional UDP-N-acet 99.9 4.1E-22 1.4E-26 204.0 28.0 303 94-487 29-337 (343)
18 4htl_A Beta-glucoside kinase; 99.9 2.8E-22 9.5E-27 201.6 24.9 280 96-488 5-291 (297)
19 2aa4_A Mannac kinase, putative 99.9 7E-23 2.4E-27 204.3 15.9 278 96-486 2-286 (289)
20 3htv_A D-allose kinase, alloki 99.9 2.6E-21 8.9E-26 195.9 22.1 285 93-487 5-298 (310)
21 3mcp_A Glucokinase; structural 99.9 3.6E-21 1.2E-25 199.2 20.2 279 93-481 7-310 (366)
22 2gup_A ROK family protein; sug 99.9 1.2E-20 4E-25 188.6 21.1 275 96-487 5-286 (292)
23 3epq_A Putative fructokinase; 99.9 1.4E-20 4.9E-25 189.9 19.7 268 96-487 4-288 (302)
24 1sz2_A Glucokinase, glucose ki 99.8 1.9E-19 6.4E-24 183.7 20.5 291 94-487 13-325 (332)
25 2q2r_A Glucokinase 1, putative 99.8 2.4E-20 8.3E-25 193.2 14.0 295 94-487 28-370 (373)
26 2ch5_A NAGK protein; transfera 99.8 4E-18 1.4E-22 174.1 22.5 303 96-488 7-324 (347)
27 1woq_A Inorganic polyphosphate 99.8 1E-17 3.5E-22 165.6 20.4 249 91-490 8-263 (267)
28 2e2o_A Hexokinase; acetate and 99.7 7.9E-18 2.7E-22 168.6 10.9 277 96-487 3-286 (299)
29 1saz_A Probable butyrate kinas 99.7 7.7E-17 2.6E-21 167.7 9.4 292 96-486 3-346 (381)
30 3lm2_A Putative kinase; struct 99.6 2.4E-15 8.2E-20 145.6 10.0 203 93-457 4-207 (226)
31 1zbs_A Hypothetical protein PG 99.5 7.4E-14 2.5E-18 139.6 15.6 124 97-261 2-126 (291)
32 1zc6_A Probable N-acetylglucos 99.5 1.5E-13 5E-18 138.2 16.1 126 96-261 12-139 (305)
33 1zxo_A Conserved hypothetical 99.5 2.4E-14 8.1E-19 143.2 10.1 121 97-262 2-126 (291)
34 3ifr_A Carbohydrate kinase, FG 98.4 0.00039 1.3E-08 74.4 30.5 97 92-195 4-107 (508)
35 2p3r_A Glycerol kinase; glycer 97.1 0.0016 5.3E-08 69.8 10.2 96 93-195 1-104 (510)
36 4e1j_A Glycerol kinase; struct 97.0 0.0017 6E-08 69.6 9.9 94 95-195 26-127 (520)
37 3h3n_X Glycerol kinase; ATP-bi 96.9 0.0036 1.2E-07 66.9 11.0 95 94-195 4-106 (506)
38 3g25_A Glycerol kinase; IDP007 96.9 0.0029 1E-07 67.5 10.2 93 96-195 7-107 (501)
39 2dpn_A Glycerol kinase; thermu 96.9 0.0033 1.1E-07 66.9 10.2 81 96-183 3-90 (495)
40 2w40_A Glycerol kinase, putati 96.8 0.0047 1.6E-07 65.8 10.7 81 96-183 5-94 (503)
41 3ezw_A Glycerol kinase; glycer 96.8 0.0032 1.1E-07 67.6 9.1 77 92-175 1-80 (526)
42 2itm_A Xylulose kinase, xylulo 96.7 0.0052 1.8E-07 65.2 10.2 90 96-194 1-97 (484)
43 2zf5_O Glycerol kinase; hypert 96.7 0.0048 1.6E-07 65.7 9.8 92 96-194 4-102 (497)
44 2d4w_A Glycerol kinase; alpha 96.7 0.0051 1.8E-07 65.6 10.0 81 96-183 3-90 (504)
45 3l0q_A Xylulose kinase; xlylul 96.4 0.0064 2.2E-07 65.7 8.9 63 95-160 5-70 (554)
46 3hz6_A Xylulokinase; xylulose, 96.3 0.011 3.7E-07 63.2 9.7 93 95-195 5-104 (511)
47 4ehu_A Activator of 2-hydroxyi 96.3 0.23 8E-06 48.0 18.5 35 226-260 75-110 (276)
48 3ll3_A Gluconate kinase; xylul 96.2 0.021 7.1E-07 60.9 10.9 91 95-195 4-101 (504)
49 3jvp_A Ribulokinase; PSI-II, N 96.1 0.012 4E-07 63.9 8.9 83 95-184 5-106 (572)
50 1hux_A Activator of (R)-2-hydr 96.1 0.11 3.9E-06 50.6 15.0 72 392-489 185-257 (270)
51 2uyt_A Rhamnulokinase; rhamnos 95.2 0.038 1.3E-06 58.4 8.2 81 95-184 4-93 (489)
52 3h6e_A Carbohydrate kinase, FG 94.9 0.04 1.4E-06 58.5 7.5 58 95-155 6-65 (482)
53 3bex_A Type III pantothenate k 94.8 0.097 3.3E-06 50.6 9.1 48 96-152 4-51 (249)
54 3i8b_A Xylulose kinase; strain 94.5 0.092 3.1E-06 56.1 8.9 87 94-195 4-95 (515)
55 3djc_A Type III pantothenate k 92.1 0.28 9.5E-06 48.0 7.2 50 96-159 3-52 (266)
56 2ych_A Competence protein PILM 90.8 3.6 0.00012 41.2 14.3 54 206-261 151-209 (377)
57 3h1q_A Ethanolamine utilizatio 89.2 6.3 0.00022 37.3 14.0 29 210-240 110-138 (272)
58 4bc3_A Xylulose kinase; transf 88.1 1.1 3.6E-05 48.0 8.3 46 436-490 438-483 (538)
59 2h3g_X Biosynthetic protein; p 86.9 1.1 3.8E-05 43.6 6.9 45 97-150 2-46 (268)
60 4gni_A Putative heat shock pro 85.0 3.9 0.00013 41.5 10.2 89 392-496 313-408 (409)
61 3qfu_A 78 kDa glucose-regulate 84.0 4.4 0.00015 40.6 10.0 32 207-240 168-199 (394)
62 3i33_A Heat shock-related 70 k 83.2 4.5 0.00015 40.9 9.8 32 207-240 173-204 (404)
63 3ezw_A Glycerol kinase; glycer 80.9 6.7 0.00023 41.5 10.4 77 397-490 375-451 (526)
64 2p3r_A Glycerol kinase; glycer 70.2 18 0.00062 38.0 10.2 47 435-490 404-450 (510)
65 3g25_A Glycerol kinase; IDP007 70.1 16 0.00055 38.3 9.7 47 435-490 407-453 (501)
66 4b9q_A Chaperone protein DNAK; 68.2 18 0.00061 39.1 9.8 83 392-491 302-384 (605)
67 2v7y_A Chaperone protein DNAK; 68.0 26 0.00089 36.8 10.8 31 208-240 125-155 (509)
68 4a2a_A Cell division protein F 68.0 68 0.0023 32.7 13.8 54 206-261 168-224 (419)
69 3h3n_X Glycerol kinase; ATP-bi 66.4 19 0.00066 37.8 9.4 47 435-490 406-452 (506)
70 2d4w_A Glycerol kinase; alpha 64.0 27 0.00091 36.6 9.9 47 435-490 406-452 (504)
71 3jvp_A Ribulokinase; PSI-II, N 60.5 23 0.0008 37.8 8.8 49 435-491 442-490 (572)
72 2w40_A Glycerol kinase, putati 60.4 28 0.00095 36.4 9.3 46 436-490 411-456 (503)
73 1yuw_A Heat shock cognate 71 k 59.2 36 0.0012 36.2 10.0 31 208-240 155-185 (554)
74 3i8b_A Xylulose kinase; strain 58.9 37 0.0013 35.7 10.0 47 435-490 427-473 (515)
75 4e1j_A Glycerol kinase; struct 58.8 26 0.0009 36.9 8.7 46 436-490 429-474 (520)
76 2dpn_A Glycerol kinase; thermu 58.2 28 0.00096 36.3 8.8 46 436-490 402-447 (495)
77 2kho_A Heat shock protein 70; 57.5 40 0.0014 36.2 10.1 51 208-260 151-205 (605)
78 3ll3_A Gluconate kinase; xylul 56.9 38 0.0013 35.5 9.6 47 435-490 396-442 (504)
79 3mdq_A Exopolyphosphatase; str 56.8 41 0.0014 33.1 9.2 62 96-157 5-68 (315)
80 3nuw_A 2-OXO-3-deoxygalactonat 52.1 15 0.00053 36.1 5.1 26 95-124 6-31 (295)
81 1hjr_A Holliday junction resol 51.3 37 0.0013 30.1 7.1 59 96-160 2-60 (158)
82 3hi0_A Putative exopolyphospha 51.1 36 0.0012 35.9 8.2 76 80-157 2-79 (508)
83 3l0q_A Xylulose kinase; xlylul 51.1 47 0.0016 35.2 9.2 47 435-490 445-491 (554)
84 3vth_A Hydrogenase maturation 50.6 56 0.0019 36.3 9.9 48 435-488 696-747 (761)
85 3h6e_A Carbohydrate kinase, FG 48.6 21 0.00072 37.4 5.9 62 410-489 374-436 (482)
86 1t6c_A Exopolyphosphatase; alp 47.7 47 0.0016 32.6 8.0 62 96-157 13-76 (315)
87 2zf5_O Glycerol kinase; hypert 47.7 42 0.0014 35.0 8.0 46 436-490 397-442 (497)
88 2itm_A Xylulose kinase, xylulo 47.0 53 0.0018 34.1 8.7 46 436-490 390-436 (484)
89 3t69_A Putative 2-dehydro-3-de 46.1 15 0.00052 36.7 4.1 54 95-155 7-60 (330)
90 2i7n_A Pantothenate kinase 1; 44.2 65 0.0022 32.5 8.4 79 392-486 279-358 (360)
91 2uyt_A Rhamnulokinase; rhamnos 44.2 77 0.0026 32.8 9.4 45 436-490 397-441 (489)
92 1nu0_A Hypothetical protein YQ 43.8 77 0.0026 27.3 7.8 22 95-116 3-24 (138)
93 2ews_A Pantothenate kinase; PA 42.3 1.3E+02 0.0045 29.1 10.1 69 393-482 211-279 (287)
94 4bc3_A Xylulose kinase; transf 37.7 53 0.0018 34.7 6.9 32 95-129 10-41 (538)
95 3cer_A Possible exopolyphospha 36.2 74 0.0025 31.6 7.4 63 96-158 17-82 (343)
96 3hz6_A Xylulokinase; xylulose, 35.7 77 0.0026 33.1 7.8 43 217-260 228-272 (511)
97 4ep4_A Crossover junction endo 34.8 2.3E+02 0.008 25.1 9.7 22 96-117 2-23 (166)
98 2ews_A Pantothenate kinase; PA 34.6 24 0.00082 34.5 3.4 19 94-112 19-37 (287)
99 2fsj_A Hypothetical protein TA 34.4 59 0.002 32.1 6.4 52 93-153 188-239 (346)
100 1u6z_A Exopolyphosphatase; alp 34.3 88 0.003 32.9 8.0 63 96-158 12-76 (513)
101 3psf_A Transcription elongatio 32.8 6.2E+02 0.021 29.1 15.7 131 56-239 490-631 (1030)
102 3ttc_A HYPF, transcriptional r 32.4 52 0.0018 36.0 5.8 46 435-488 602-651 (657)
103 4ijn_A Acetate kinase, acetoki 30.6 72 0.0024 32.6 6.2 25 435-459 326-350 (398)
104 3tai_A DNA double-strand break 28.5 54 0.0018 33.9 4.7 49 49-101 23-71 (471)
105 3cet_A Conserved archaeal prot 28.3 36 0.0012 34.0 3.4 60 372-441 226-285 (334)
106 3eno_A Putative O-sialoglycopr 25.2 3.7E+02 0.013 26.2 10.4 73 96-176 7-81 (334)
107 1iv0_A Hypothetical protein; r 23.3 1.6E+02 0.0055 23.6 6.0 21 96-116 2-22 (98)
108 3psi_A Transcription elongatio 22.8 9.7E+02 0.033 28.0 15.6 101 96-239 517-628 (1219)
109 3aap_A Ectonucleoside triphosp 22.7 2.5E+02 0.0085 27.9 8.5 61 94-156 2-64 (353)
110 3qfu_A 78 kDa glucose-regulate 22.6 3.4E+02 0.012 26.4 9.6 27 91-117 202-228 (394)
111 2ivn_A O-sialoglycoprotein end 21.6 4.8E+02 0.016 25.2 10.3 47 435-487 247-297 (330)
112 1dkg_D Molecular chaperone DNA 20.3 43 0.0015 33.2 2.3 31 208-240 151-181 (383)
113 1mul_A NS2, HU-2, DNA binding 20.2 1.5E+02 0.0052 23.0 5.2 36 38-73 4-39 (90)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=6.3e-124 Score=987.72 Aligned_cols=443 Identities=35% Similarity=0.583 Sum_probs=405.7
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCccceeEEEEEeCCceEEEEEE
Q 010895 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (498)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V 112 (498)
..+.+.++++.+.|.++.++|++|+++|++||++||++++ +|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 15 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V 94 (470)
T 3f9m_A 15 GMKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94 (470)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEE
Confidence 3455667777778889999999999999999999999763 48899999999999999999999999999999999999
Q ss_pred EeCCCc--ceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEE
Q 010895 113 QLGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (498)
Q Consensus 113 ~l~g~~--~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~L 190 (498)
+|.|++ .+.+++.+++|+||++++.+++++||||||+||.+|+++++.. .+.+||||||||||+|+++++|+|
T Consensus 95 ~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~L 169 (470)
T 3f9m_A 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGIL 169 (470)
T ss_dssp EEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEE
T ss_pred EECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEE
Confidence 998764 2355556678999999999999999999999999999987642 467999999999999999999999
Q ss_pred EccCCccccCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccc
Q 010895 191 IKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW 269 (498)
Q Consensus 191 i~wtKgF~~~~~~G~dv~~lL~~al~~~~-l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~ 269 (498)
++|||||++++++|+||+++|++|++|+| +||+|+||+||||||||+++|.+++|.||+|+|||||+||+|+.++|+|+
T Consensus 170 i~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~ 249 (470)
T 3f9m_A 170 LNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELV 249 (470)
T ss_dssp CCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTS
T ss_pred EeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccc
Confidence 99999999999999999999999999998 79999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcEEEeccCCCcCCCC---CCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCC
Q 010895 270 HGLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVP 346 (498)
Q Consensus 270 ~~~~~~~~~miIN~EwG~f~~~~---lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~ 346 (498)
++ ..++||||||||+||+++ +|+|+||+.+|++|.|||+|+||||+||||||||+|++|+++++++.||++..|
T Consensus 250 ~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~ 326 (470)
T 3f9m_A 250 EG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 326 (470)
T ss_dssp SC---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCC
T ss_pred cC---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCc
Confidence 86 567899999999999765 479999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 010895 347 PKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTV 426 (498)
Q Consensus 347 ~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~ 426 (498)
++|.+||+|+|++||.|+.|++++ +.++.+++. ++++ ++.+|++++|+||++|++|||+|+||+|+||+++++....
T Consensus 327 ~~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~ 403 (470)
T 3f9m_A 327 EQLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRS 403 (470)
T ss_dssp TTTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999888 889999987 8885 6669999999999999999999999999999999975321
Q ss_pred CCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhcccc
Q 010895 427 RDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYL 493 (498)
Q Consensus 427 ~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~ 493 (498)
....+++||+|||||++||.|+++++++++++++ .++|+|.+++||||+|||++||+++|..
T Consensus 404 --~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~~ 465 (470)
T 3f9m_A 404 --EDVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKKA 465 (470)
T ss_dssp --CSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC--
T ss_pred --ccccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHHH
Confidence 1225699999999999999999999999999984 3689999999999999999999998865
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-120 Score=955.75 Aligned_cols=434 Identities=38% Similarity=0.610 Sum_probs=399.1
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCCCcc
Q 010895 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (498)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g~~~ 119 (498)
.++++.++|.++.++|++|+++|+.||++||++++ |+++||||||+++|+|+|+|.|||||+|||||||++|++.++
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 34555566679999999999999999999999765 889999999999999999999999999999999999999764
Q ss_pred eeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCcccc
Q 010895 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (498)
Q Consensus 120 ~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKgF~~ 199 (498)
+...+++|+||++++.+++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 3334467999999999999999999999999999987642 467999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHc-CCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccccCCCCCCCc
Q 010895 200 EDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGE 278 (498)
Q Consensus 200 ~~~~G~dv~~lL~~al~~~-~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~ 278 (498)
++++|+||+++|+++++|+ ++||+|+||+||||||||+++|.+++|.||+|+|||||+||+|+.++|+|+++ +.++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999875 4578
Q ss_pred EEEeccCCCcCCCCC---CCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCcc
Q 010895 279 MVINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFIL 355 (498)
Q Consensus 279 miIN~EwG~f~~~~l---p~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l 355 (498)
|+||||||+||++++ |+|+||+.+|+.|.|||+|+||||+||+|||||+|++|+++++++.||++..|+.|.+||+|
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l 311 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIF 311 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCS
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCC
Confidence 999999999998763 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEE
Q 010895 356 RTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSV 435 (498)
Q Consensus 356 ~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~ 435 (498)
+|++||.|++|++ ++..+..+|++ +++ .++.+|++++|+||++|++|||+|+||+|+||++++++... ....+++
T Consensus 312 ~T~~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~--~~~~~~~ 386 (445)
T 3hm8_A 312 KTKFLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRG--LEELAVS 386 (445)
T ss_dssp CHHHHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEE
T ss_pred CcHHHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccCcE
Confidence 9999999999865 57788899977 999 68999999999999999999999999999999999964211 1224789
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhccccc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 494 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~~ 494 (498)
||+|||||++||.|+++++++++++.+. ++|+|.+++||||+|||++||+++|...
T Consensus 387 VgvDGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~~~ 442 (445)
T 3hm8_A 387 VGVDGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRLAQ 442 (445)
T ss_dssp EEEECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEeceehccChhHHHHHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999764 5899999999999999999999987653
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=1.2e-118 Score=953.71 Aligned_cols=448 Identities=36% Similarity=0.583 Sum_probs=416.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceEEEEE
Q 010895 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (498)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~ 111 (498)
+-+.++.+.+++++++|.+|.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|+|||||+|||||||++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 4566888999999999999999999999999999999999764 789999999999999999999999999999999999
Q ss_pred EEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEE
Q 010895 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (498)
Q Consensus 112 V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li 191 (498)
|++.|++. .....++|+||++++.+++++||||||+||.+|+++++.+. ..+.+++|||||||++|+++++|+|+
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99987642 22234579999999988899999999999999999986431 24579999999999999999999999
Q ss_pred ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccccC
Q 010895 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (498)
Q Consensus 192 ~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~~ 271 (498)
+|||||++++++|+||+++|+++++|+|+||+|+||+||||||||+++|.++++.||+|+|||+|+||+|+.++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ----CCCCCCcEEEeccCCCcCCC--CCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCC
Q 010895 272 ----LLPKSGEMVINMEWGNFRSS--HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTV 345 (498)
Q Consensus 272 ----~~~~~~~miIN~EwG~f~~~--~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~ 345 (498)
..+..++||||||||+||+. .+|+|+||+.+|+.|.|||+|+||||+||||||||+|++|+++++++.||++..
T Consensus 252 ~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~ 331 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSC
T ss_pred cccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCC
Confidence 22345789999999999875 489999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 010895 346 PPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 425 (498)
Q Consensus 346 ~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~ 425 (498)
|++|.+||+|+|++||.|++|++++++.+..+|++.++++ ++.+|++++|+||++|++|||+|+|++|+||++++++
T Consensus 332 ~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~-- 408 (485)
T 3o8m_A 332 ISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY-- 408 (485)
T ss_dssp CGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999999999999999999999999999999995 8899999999999999999999999999999999998
Q ss_pred cCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCC----CccEEEEEcCChhHHHHHHHHHHhccccc
Q 010895 426 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQYLE 494 (498)
Q Consensus 426 ~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~----~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~~ 494 (498)
++++||+|||||++||.|+++++++++++++... .++|+|.+++||||+|||++||++++...
T Consensus 409 ------~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~~~ 475 (485)
T 3o8m_A 409 ------KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKRLA 475 (485)
T ss_dssp ------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHHHH
T ss_pred ------CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999987432 46899999999999999999999887643
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=4.7e-108 Score=871.20 Aligned_cols=440 Identities=35% Similarity=0.593 Sum_probs=407.6
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeecccccCCCCccceeEEEEEeCCceEEEEE
Q 010895 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (498)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~ 111 (498)
++.+.+.+++|.+.|.++.++|++|+++|++||++||++ +..|+++||||||+++|+|+|+|+|||||||||||||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 445677889999999999999999999999999999984 234889999999999999999999999999999999999
Q ss_pred EEeCC-CcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEE
Q 010895 112 VQLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (498)
Q Consensus 112 V~l~g-~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~L 190 (498)
|+++| ++. .+...++|+||++++.+++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99988 432 2222357999999888899999999999999999987642 346999999999999999999999
Q ss_pred EccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCcccccc
Q 010895 191 IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (498)
Q Consensus 191 i~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~ 270 (498)
++|||||++++++|+||+++|+++++|+|+||+|++|+||||||+++++|.++++.||+|+|||+|+||+|+.++|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeccCCCcCCCC---CCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCC
Q 010895 271 GLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPP 347 (498)
Q Consensus 271 ~~~~~~~~miIN~EwG~f~~~~---lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~ 347 (498)
+. +.+||+||+|||.|++++ +|+|+||..+|..|.|||+||||||+||+||||++|+++.++.+++.+|.+..|+
T Consensus 238 g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~ 315 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPE 315 (451)
T ss_dssp SC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCS
T ss_pred CC--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchH
Confidence 74 678999999999999875 8999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Q 010895 348 KLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 427 (498)
Q Consensus 348 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~ 427 (498)
.|.+++.|+|++||.|++|++++++.++.+++..++++.++.+|++++|++|+.|++|||+++|++|++|++++++
T Consensus 316 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~---- 391 (451)
T 1bdg_A 316 RLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR---- 391 (451)
T ss_dssp GGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred hhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 9999999999999999999999999999999987888766899999999999999999999999999999999998
Q ss_pred CCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhccc
Q 010895 428 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 492 (498)
Q Consensus 428 ~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~~ 492 (498)
++++|++|||||+++|.|++++++++++++.+ ..+|.+.+++|||++|||++|+++++.
T Consensus 392 ----~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 392 ----SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp ----SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred ----CceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999876 458999999999999999999988764
No 5
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=2.2e-103 Score=835.13 Aligned_cols=436 Identities=20% Similarity=0.257 Sum_probs=399.8
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCCC
Q 010895 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (498)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g~ 117 (498)
++.+++|.+.|.+|.++|++|+++|+.||+ ||++++ |+++||||||+++|+|+|+|+||||||||||||+++|+++|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 356778888888999999999999999999 998754 789999999999999999999999999999999999999886
Q ss_pred cceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCcc
Q 010895 118 EGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 197 (498)
Q Consensus 118 ~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKgF 197 (498)
.. .+...+++++|++.+.+++++||+||++||++|+++++.. ..+.+++|||||||+.|.++++|+|++|||||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 31 2233457999999888899999999999999999986532 23468999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccccCCC-C-C
Q 010895 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P-K 275 (498)
Q Consensus 198 ~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~-~-~ 275 (498)
++++++ ||+++|+++++|+|+|++|++|+|||++|+|+++|+++++.||+|+|||+|+||+++.++|+|+++.. . .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999998 99999999999999999999999999999999999999999999999999999999999999986531 2 4
Q ss_pred CCcEEEeccCCCcCCCC--CCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCC
Q 010895 276 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPF 353 (498)
Q Consensus 276 ~~~miIN~EwG~f~~~~--lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~ 353 (498)
.++|+||+|||.|++++ +|+|+||+.+|..|.||| |+||||+||+||||++|++|.++.+++.||.+ .|+.|.+||
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~ 313 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAAN 313 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTT
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhccccc
Confidence 67899999999999754 899999999999999999 99999999999999999999999999999998 999999999
Q ss_pred ccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCce
Q 010895 354 ILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQK 433 (498)
Q Consensus 354 ~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~ 433 (498)
+|+|++||.|+.|++++++.++.+|.+.++++ ++.+|++++|++|+.|++|||+|+|++|++|++++++ ++
T Consensus 314 ~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~--------~~ 384 (457)
T 2yhx_A 314 VENTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY--------SS 384 (457)
T ss_dssp CSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC--------SS
T ss_pred CcChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------Cc
Confidence 99999999999998889988999997779985 5999999999999999999999999999999999997 46
Q ss_pred EEEEEeceEecccHhHHHHHHHHHHHHhCcCC----CccEEEEEcCChhHHHHHHHHHHhcccccc
Q 010895 434 SVIALDGGLFEHYTKFSACMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQYLEV 495 (498)
Q Consensus 434 ~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~----~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~~~ 495 (498)
++|++|||| ++||.|+++++++++++++++. .++|+|.+++|||++|||++||+++++...
T Consensus 385 ~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~~~ 449 (457)
T 2yhx_A 385 GHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXXSX 449 (457)
T ss_dssp EEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhhhh
Confidence 789999999 9999999999999999987643 468999999999999999999999887654
No 6
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.2e-101 Score=884.03 Aligned_cols=441 Identities=38% Similarity=0.587 Sum_probs=399.4
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCC
Q 010895 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (498)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g 116 (498)
+.++++.++|.++.++|++|+++|++||++||+++ ..|+++||||||+++|+|+|+|+|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34566777778999999999999999999999853 3488999999999999999999999999999999999999964
Q ss_pred CcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCc
Q 010895 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (498)
Q Consensus 117 ~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKg 196 (498)
.+.+++++.+++|+||++++.+++++||||||+||.+|+++++.. .+.+|||||||||++|+++++|+|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 332355555678999999888899999999999999999987642 346899999999999999999999999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHc-CCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccccCCCCC
Q 010895 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 275 (498)
Q Consensus 197 F~~~~~~G~dv~~lL~~al~~~-~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~ 275 (498)
|++++++|+||+++|+++++|+ ++||+++||+|||||||++++|.+++|.||+|+|||+|+||+|+.++|+++.+ +
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999874 5
Q ss_pred CCcEEEeccCCCcCCCC---CCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCC
Q 010895 276 SGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIP 352 (498)
Q Consensus 276 ~~~miIN~EwG~f~~~~---lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~ 352 (498)
.+||+||+|||.||+++ +|+|+||+.+|+.|.|||+||||||+||+||||++|++|.++.+++.+|.+..|+.|.++
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~ 779 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTR 779 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccC
Confidence 78999999999999865 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCc
Q 010895 353 FILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQ 432 (498)
Q Consensus 353 ~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~ 432 (498)
+.|+|++||.|+.|++ ++..++.+++. +++ .++.+|++++|++|++|++|||+|+|++|++|++++++... ....
T Consensus 780 ~~~~t~~ls~ie~d~~-~~~~~~~i~~~-~~~-~~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~--~~~~ 854 (917)
T 1cza_N 780 GIFETKFLSQIESDRL-ALLQVRAILQQ-LGL-NSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRG--LDRL 854 (917)
T ss_dssp TCSCHHHHHHHTCSSC-CHHHHHHHHHH-HTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSE
T ss_pred CccchHHhhhhhcCcc-hhhHHHHHHHH-hCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--cCcc
Confidence 9999999999999987 46678888886 788 47899999999999999999999999999999999976321 1123
Q ss_pred eEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhcccccc
Q 010895 433 KSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEV 495 (498)
Q Consensus 433 ~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~~~ 495 (498)
+++|++|||||++||.|+++++++++++.+. ++|+|++++|||++|||++||++++...-
T Consensus 855 ~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~dgsg~GAAl~aa~~~~~~~~ 914 (917)
T 1cza_N 855 NVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAVGVRLRTE 914 (917)
T ss_dssp EEEEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSSCSHHHHHHHHHHHHHHHC-
T ss_pred ceEEEECCHHHHcCcHHHHHHHHHHHHhCCC---CceEEEEecCChHHHHHHHHHHHHHHHhh
Confidence 4789999999999999999999999998742 57999999999999999999999877653
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.4e-87 Score=768.06 Aligned_cols=440 Identities=35% Similarity=0.564 Sum_probs=395.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCccceeEEEEEeCCceEEEEEEE
Q 010895 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (498)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~ 113 (498)
.+.+.+++|.+.|.+|.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|+||||||||||||+++|+
T Consensus 17 ~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 17 DQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 345567888888899999999999999999999998754 478999999999999999999999999999999999999
Q ss_pred eCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEcc
Q 010895 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (498)
Q Consensus 114 l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~w 193 (498)
++|++...++...+++++|++++.+++++||+|||++|++|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 977533333233457999988777789999999999999999887542 235799999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEEcccCccccccCC
Q 010895 194 TKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (498)
Q Consensus 194 tKgF~~~~~~G~dv~~lL~~al~~~~-l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~ 272 (498)
||||++++++|+||+++|+++++|+| +|+++++|+|||++|+++++|.++++.||+|+|||+|+||+++.++|+++.+.
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~ 251 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD 251 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC
Confidence 99999999999999999999999987 89999999999999999999999999999999999999999999999998763
Q ss_pred CCCCCcEEEeccCCCcCCCC---CCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCc
Q 010895 273 LPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKL 349 (498)
Q Consensus 273 ~~~~~~miIN~EwG~f~~~~---lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l 349 (498)
.+||+||+|||.|++++ +|+|+||..+|..|+|||+||||||+||+||||++|+++.++++++.+|.+..|+.|
T Consensus 252 ---~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l 328 (917)
T 1cza_N 252 ---EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPEL 328 (917)
T ss_dssp ---SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTT
T ss_pred ---CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhh
Confidence 57899999999998765 369999999999999999999999999999999999999999998889988888899
Q ss_pred CCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcC
Q 010895 350 KIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL--GRDTVR 427 (498)
Q Consensus 350 ~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~--~~~~~~ 427 (498)
.+++.|++++++.++ |+++++..+..+++. ++++ ++..|++.++.+|..|++|+|+++|++|++|++++ +|..
T Consensus 329 ~~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~-- 403 (917)
T 1cza_N 329 LTRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGT-- 403 (917)
T ss_dssp TSTTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred ccccccChHHHHHHh-cccccHHHHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc--
Confidence 999999999999999 557788888999987 7884 78999999999999999999999999999999999 5521
Q ss_pred CCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhcccc
Q 010895 428 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYL 493 (498)
Q Consensus 428 ~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~~~ 493 (498)
..++.+|++|||||++||.|+++++++++++++. ..++|.+++|||++|||++||++++..
T Consensus 404 --~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~---~~~~i~~a~dgs~~GAA~laa~~~~l~ 464 (917)
T 1cza_N 404 --PRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTAVAYRLA 464 (917)
T ss_dssp --SSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred --cCcceEEEECCchhhccHHHHHHHHHHHHHhcCC---CceEEEEeccchHHHHHHHHHhHhhhh
Confidence 1134689999999999999999999999998732 579999999999999999999987643
No 8
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.94 E-value=5.3e-25 Score=223.07 Aligned_cols=308 Identities=16% Similarity=0.160 Sum_probs=221.6
Q ss_pred ceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceee
Q 010895 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (498)
.+++|+||+|||++|++++++.|+ ++.+. .++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|
T Consensus 5 ~~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~~ig 72 (326)
T 2qm1_A 5 DKKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMK----KEDFVGIG 72 (326)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCC----GGGEEEEE
T ss_pred ccEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCC----ccceeEEE
Confidence 358999999999999999999875 55432 3444432 356789999999999999876532 23457788
Q ss_pred eEeeeeeeeccCCceEEEccCCccccCCCCCC-cHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEE
Q 010895 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAA 248 (498)
Q Consensus 174 ftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~ig 248 (498)
++++.|++. .+|.+.. +. ++ ++.+. ++.+.|++.+ ++| +.+.||++++++++.+ .+.+..+.
T Consensus 73 i~~pG~vd~---~~g~v~~-~~--~l-~w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~ 139 (326)
T 2qm1_A 73 MGTPGSVDI---EKGTVVG-AY--NL-NWTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIF 139 (326)
T ss_dssp EEESSEEET---TTTEEEC-BG--GG-TBCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEE
T ss_pred EecccceeC---CCCEEEe-cC--CC-CccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEE
Confidence 889999864 3465542 22 22 45668 9999999998 888 5899999999999876 35688999
Q ss_pred EEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHH
Q 010895 249 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVR 328 (498)
Q Consensus 249 lIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R 328 (498)
+++|||++++++.+.+.+.+.++.+++.+||.++.++..|. |++ .+|+|.++|+.+|-+.++
T Consensus 140 l~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~----------------cG~--~gcle~~~s~~~l~~~~~ 201 (326)
T 2qm1_A 140 ITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCT----------------CGK--RGCLETVSSATGVVRVAR 201 (326)
T ss_dssp EEESSSEEEEEEETTEECCCSSSCTTCGGGSBSCTTSCBCT----------------TSS--BCBTHHHHSHHHHHHHHH
T ss_pred EEECCceEEEEEECCEEeecCCCcccccCcEEECCCCCcCC----------------CCC--ccchHhhhCHHHHHHHHH
Confidence 99999999999999998888888888899999886433332 555 459999999999987666
Q ss_pred HHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHH
Q 010895 329 RVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGAR 408 (498)
Q Consensus 329 ~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 408 (498)
..+.. ...++. +..+..+. ... ....+++. ++..+..|..+++++++
T Consensus 202 ~~~~~---------~~~~~~-----------~~~~~~~~-~~~-~~~~v~~~-----------a~~gd~~a~~i~~~~~~ 248 (326)
T 2qm1_A 202 HLSEE---------FAGDSE-----------LKQAIDDG-QDV-SSKDVFEF-----------AEKGDHFALMVVDRVCF 248 (326)
T ss_dssp HHTTT---------CCSCCH-----------HHHHHHHT-CCC-CHHHHHHH-----------HHTTCHHHHHHHHHHHH
T ss_pred HHhhc---------ccccch-----------hhhccccc-cCC-CHHHHHHH-----------HHcCCHHHHHHHHHHHH
Confidence 43210 000000 00000000 000 12233332 22334788999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHHHH
Q 010895 409 LSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAALL 485 (498)
Q Consensus 409 l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAAi~ 485 (498)
++|.+|+++++.++| + .|.++|++....|.|.+.+++.+++...+.....+.+.. .+|++.+|||.+
T Consensus 249 ~L~~~i~~l~~~l~p--------~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l 318 (326)
T 2qm1_A 249 YLGLATGNLGNTLNP--------D--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASL 318 (326)
T ss_dssp HHHHHHHHHHHHHCC--------S--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--------C--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHH
Confidence 999999999999998 3 588999999999999999999998864321112345554 677899999987
Q ss_pred HH
Q 010895 486 AA 487 (498)
Q Consensus 486 Aa 487 (498)
+.
T Consensus 319 ~~ 320 (326)
T 2qm1_A 319 AL 320 (326)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 9
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.94 E-value=5.2e-25 Score=223.81 Aligned_cols=301 Identities=17% Similarity=0.170 Sum_probs=219.9
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeee
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGf 174 (498)
+++|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|++.|.+++++. +...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH---------DVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC---------CEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc---------CceEEEE
Confidence 47899999999999999999875 44322 23332 357889999999999987542 3578999
Q ss_pred EeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEEE
Q 010895 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVI 250 (498)
Q Consensus 175 tFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~iglI 250 (498)
+++.|++. ++|.+..-+ ++ ++.+.++.+.|++.+ ++| +.+.||+++..+++.+ ++.+..+.++
T Consensus 63 ~~pG~vd~---~~g~v~~~~---~l-~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 129 (321)
T 3vgl_A 63 GAAGYVDD---KRATVLFAP---NI-DWRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICIT 129 (321)
T ss_dssp EESSEECT---TSSCEEECS---SS-CCEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred eccccEeC---CCCEEEeCC---CC-CCcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEE
Confidence 99999974 345443222 22 456689999999999 898 5899999999999886 4568899999
Q ss_pred EccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHH
Q 010895 251 LGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRV 330 (498)
Q Consensus 251 lGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~i 330 (498)
+|||++++++.+.+.+.+.++.+++.+||.++.+.-.|. |.+. .|+|.++|+..|-+..+..
T Consensus 130 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~c~----------------cG~~--gclE~~~S~~al~~~~~~~ 191 (321)
T 3vgl_A 130 LGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCG----------------CGSQ--GCWEQYASGRALVRYAKQR 191 (321)
T ss_dssp ESSSEEEEEEETTEECCCTTSCCCCGGGSBSSTTCSBCT----------------TSCB--SBGGGTSSHHHHHHHHHHH
T ss_pred eCcceEEEEEECCEEecCCCCCCccccceEecCCCCCCC----------------CCCc--CcHHHhcCHHHHHHHHHHH
Confidence 999999999999998888888888999999875433332 6664 4999999999998887765
Q ss_pred HHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010895 331 LCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLS 410 (498)
Q Consensus 331 l~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~ 410 (498)
....... +..+........... ....+++. ++..+..|..+++++++++
T Consensus 192 ~~~~~~~-------------------~~~~~~~~~~~~~~~-~~~~i~~~-----------a~~gD~~a~~~~~~~~~~L 240 (321)
T 3vgl_A 192 ANATPEN-------------------AAVLLGLGDGSVDGI-EGKHISEA-----------ARQGDPVAVDSFRELARWA 240 (321)
T ss_dssp HHHCGGG-------------------CHHHHHTTTSSSTTC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHH
T ss_pred hhcCCcc-------------------hhhhhhcccCccccC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHH
Confidence 5431000 000000000000000 12333333 2233478889999999999
Q ss_pred HHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhC-cCCCccEEEEE---cCChhHHHHHHHH
Q 010895 411 AAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLG-EEVSETVVIEH---SNDGSGIGAALLA 486 (498)
Q Consensus 411 Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~-~~~~~~i~l~~---~~Dgs~iGAAi~A 486 (498)
|.+|+++++.++| + .|.++|++....+.|.+.+++.+++... +.....+++.. .+|++.+|||.++
T Consensus 241 a~~i~~l~~~l~p--------~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~ 310 (321)
T 3vgl_A 241 GAGLADLASLFDP--------S--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLA 310 (321)
T ss_dssp HHHHHHHHHHHCC--------S--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--------C--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 9999999999998 3 5788999999999999999999998764 32233456654 6789999998765
No 10
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.94 E-value=3.1e-24 Score=226.50 Aligned_cols=342 Identities=14% Similarity=0.142 Sum_probs=243.0
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC-------CCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCC
Q 010895 44 MEEKCGTPIGKLRQVADAMTVEMHAGLASEGG-------SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (498)
Q Consensus 44 ~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~-------s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g 116 (498)
+.+.+.+|..++.++.+.|.+ +||-.+.. ..-+.+.++. | +.+++|+||+|||++|++++++.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 344556788888888887766 56532210 0012333332 3 457899999999999999999987
Q ss_pred CcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCc
Q 010895 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (498)
Q Consensus 117 ~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKg 196 (498)
+ ++.+. .++.|. .+.+++++.|++.|.+++++.+.. ..+...+|+++++|++. ++|.+.. ..
T Consensus 130 ~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~-~~- 191 (429)
T 1z05_A 130 E---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVLQ-MP- 191 (429)
T ss_dssp C---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEEE-CS-
T ss_pred C---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEee-cC-
Confidence 5 55432 344442 247899999999999999876532 23467899999999974 3465542 22
Q ss_pred cccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEEEEccCceeeEEcccCccccccCC
Q 010895 197 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (498)
Q Consensus 197 F~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~ 272 (498)
+++ |.+.|+.+.|++.+ ++| +.|.||++++.+++.+ .+.+..+.+++|||++++++.+.+.+.+.++.
T Consensus 192 -~l~-w~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~ 263 (429)
T 1z05_A 192 -HYN-VKNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGN 263 (429)
T ss_dssp -SSB-CSSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTTC
T ss_pred -CCC-CCCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCCc
Confidence 222 66789999999999 898 5899999999999976 35688999999999999999999888888887
Q ss_pred CCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCC
Q 010895 273 LPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIP 352 (498)
Q Consensus 273 ~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~ 352 (498)
+++.+||.++..+..|. |++. .|+|.++|+..|-+.++..+.. + .++.+.
T Consensus 264 AGEiGH~~v~~~g~~c~----------------cG~~--gclE~~~S~~al~~~~~~~~~~----~------~~~~l~-- 313 (429)
T 1z05_A 264 IGELGHIQIDPQGKRCH----------------CGNY--GCLETVASSQAIRDQVTARIQA----G------EPSCLA-- 313 (429)
T ss_dssp TTBCTTSBCCTTCCBCT----------------TSCB--SBTHHHHSHHHHHHHHHHHHHT----T------CCCTTT--
T ss_pred ccccCceEEcCCCCCCC----------------CCCC--cchHHHhCHHHHHHHHHHHhhc----c------cccccc--
Confidence 88899999886544443 6664 5999999999887766553221 1 011110
Q ss_pred CccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCc
Q 010895 353 FILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQ 432 (498)
Q Consensus 353 ~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~ 432 (498)
.....+ ...+++. ++..+..|..+++++++++|.+|+++++.++| +
T Consensus 314 ------------~~~~~~---~~~i~~~-----------a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP--------~ 359 (429)
T 1z05_A 314 ------------TVEEIS---IEDICAA-----------AADGDPLAVDVIQQLGRYLGAAIAIVINLFNP--------E 359 (429)
T ss_dssp ------------TCSSCC---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S
T ss_pred ------------cccCCC---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C
Confidence 000011 2233332 22334778899999999999999999999998 3
Q ss_pred eEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHHHHHH
Q 010895 433 KSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAALLAA 487 (498)
Q Consensus 433 ~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAAi~Aa 487 (498)
.|.++|++....|.|.+.+++.+++...+.....+.+.. .+| +.+|||.++.
T Consensus 360 --~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 360 --KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp --EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred --EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 478999999999999999999998764321112345554 577 9999998764
No 11
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.93 E-value=2.1e-24 Score=225.96 Aligned_cols=346 Identities=14% Similarity=0.096 Sum_probs=243.5
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCCCc
Q 010895 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (498)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g~~ 118 (498)
++.+.+.+|..++.++.++|.+ +||=.+.. ++----|+.+.--| +.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4455567888888888888876 57632210 11111222222112 4578999999999999999999875
Q ss_pred ceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCccc
Q 010895 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (498)
Q Consensus 119 ~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKgF~ 198 (498)
++.+. .++.|. .+.+++++.+++.|.+++++.+.. ..+...+|+++++|++. ++|.+. |.. +
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~--~ 169 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMP--F 169 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECT--T
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCC--C
Confidence 55432 344432 356789999999999999876432 23467899999999974 456665 333 3
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEEEEccCceeeEEcccCccccccCCCC
Q 010895 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274 (498)
Q Consensus 199 ~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~ 274 (498)
.++|.+.|+.+.|++.+ ++| +.|.||++++.+++.+ .+.+..+.+++|||++++++.+.+.+.+.++.++
T Consensus 170 l~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 170 YEDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp CTTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred CCCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 45677899999999999 888 5899999999999975 3567899999999999999999998888888778
Q ss_pred CCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCc
Q 010895 275 KSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFI 354 (498)
Q Consensus 275 ~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~ 354 (498)
+.+||.++.....|. |++. .|+|.++|+..|-+.++..+.. .+ +..+.
T Consensus 244 EiGh~~v~~~g~~c~----------------cG~~--gclE~~~S~~al~~~~~~~~~~------~~----~~~~~---- 291 (406)
T 1z6r_A 244 EIGHTQVDPYGKRCY----------------CGNH--GCLETIASVDSILELAQLRLNQ------SM----SSMLH---- 291 (406)
T ss_dssp CGGGSBSCTTSCBCT----------------TSCB--SBTHHHHSHHHHHHHHHHHHTT------CT----TCGGG----
T ss_pred cCCceEecCCCCCCC----------------CCCc--cchHHHcCHHHHHHHHHHhhhc------cc----ccccC----
Confidence 889999875444443 6664 4999999999987766543210 00 00000
Q ss_pred cCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceE
Q 010895 355 LRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKS 434 (498)
Q Consensus 355 l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~ 434 (498)
.+ .. ....+++. ++..+..|..+++++++++|.+++++++.++| +
T Consensus 292 ----------~~-~~---~~~~v~~~-----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ldP--------~-- 336 (406)
T 1z6r_A 292 ----------GQ-PL---TVDSLCQA-----------ALRGDLLAKDIITGVGAHVGRILAIMVNLFNP--------Q-- 336 (406)
T ss_dssp ----------SS-CC---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--
T ss_pred ----------cc-cC---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--
Confidence 00 01 12333332 22234678899999999999999999999998 3
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE---EcCChhHHHHHHHH
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE---HSNDGSGIGAALLA 486 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~---~~~Dgs~iGAAi~A 486 (498)
.|.++|++....|.|.+.+++.+++...+.....+.+. +.+|++.+|||++.
T Consensus 337 ~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 337 KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred EEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 47789999999999999999999877322111234454 46788999998764
No 12
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.92 E-value=1.2e-23 Score=218.77 Aligned_cols=325 Identities=14% Similarity=0.152 Sum_probs=232.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCCcceeecccccCCCCccceeEEEEEeCCceEEEEEEEeCCCcc
Q 010895 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEG---GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (498)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~l~MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g~~~ 119 (498)
++.+.+.+|..++.++.+++.+ +||=.+. .++-=-=|+.+.-- .+.+++|+||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 3444456888888888888766 5763211 11110111111111 24578999999999999999999875
Q ss_pred eeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCcccc
Q 010895 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (498)
Q Consensus 120 ~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKgF~~ 199 (498)
++.+. .++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|+++++|++. .+|.+. +.. ++
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~--~l 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSALTVAAPGPIDT---ERGIII-DPR--NF 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEEEEEESSCEET---TTTEEC-CCS--SC
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC----cCcEEEEEEEeeccEEC---CCCEEe-ccC--CC
Confidence 55432 3444432 257889999999999999875421 23467889999999974 345553 222 22
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCC--CcEEEEEEccCceeeEEcccCccccccCCCCCCC
Q 010895 200 EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSG 277 (498)
Q Consensus 200 ~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~--~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~ 277 (498)
+|.+.|+.+.|++.+ ++| +.|.||++++++++.+... +..+.+++|||++++++.+.+.+.+.++.+++.+
T Consensus 174 -~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiG 246 (380)
T 2hoe_A 174 -PLSQIPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIG 246 (380)
T ss_dssp -TTBTSCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGG
T ss_pred -CCcCCChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCcccccc
Confidence 466789999999999 888 5899999999999986433 8899999999999999999998898888888999
Q ss_pred cEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCccCc
Q 010895 278 EMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRT 357 (498)
Q Consensus 278 ~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t 357 (498)
||.++.+ -.|. |++ .+|+|.++|+..|-+ . + +
T Consensus 247 h~~v~~~-~~c~----------------cG~--~gclE~~~s~~~l~~----------~----~-----~---------- 278 (380)
T 2hoe_A 247 YTRVFNG-NEYV----------------FLE--DVCNENVVLKHVLSM----------G----F-----S---------- 278 (380)
T ss_dssp GCEEECS-SSEE----------------EHH--HHHCHHHHHHHHHHH----------C----C-----C----------
T ss_pred ceEecCC-CCCC----------------CCC--ccHHHHHcCHHHHHH----------H----H-----H----------
Confidence 9999753 2221 444 469999999977653 0 0 0
Q ss_pred hhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEE
Q 010895 358 PHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIA 437 (498)
Q Consensus 358 ~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~ 437 (498)
++ ++. ++..+..|..+++++++++|.+++++++.++| + .|.
T Consensus 279 ------------~v------~~~-----------a~~gD~~a~~~l~~~~~~La~~i~~l~~~ldP--------~--~Iv 319 (380)
T 2hoe_A 279 ------------SL------AEA-----------RDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI--------S--KIV 319 (380)
T ss_dssp -------------T------THH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEE
T ss_pred ------------HH------HHH-----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEE
Confidence 00 000 11122667889999999999999999999998 3 477
Q ss_pred EeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE---EcCChhHHHHHHHHH
Q 010895 438 LDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE---HSNDGSGIGAALLAA 487 (498)
Q Consensus 438 idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~---~~~Dgs~iGAAi~Aa 487 (498)
++|++....|.|.+.+++.+++...+. ..+.+. +.+|++.+|||.++.
T Consensus 320 lgG~~~~~~~~l~~~l~~~l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 320 IGGFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp EEEGGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred EcCchhhhhHHHHHHHHHHHHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 899999888999999999998875432 234454 467889999998763
No 13
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.92 E-value=1.3e-23 Score=211.94 Aligned_cols=287 Identities=16% Similarity=0.145 Sum_probs=214.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|++++++++ ++.. ..++.|.. ..+++++.|++.+.+++++.. .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLSK--VVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSCC--EEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEEE--EEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 589999999999999998863 2222 23444432 237899999999999987642 236789999
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEEEE
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~iglIl 251 (498)
++.|++. ++|.+...+ +++++.+.|+.+.|++.+ ++| +.+.||+++..+++.+ ++.+..+.+++
T Consensus 65 ~pG~vd~---~~g~v~~~~---~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 65 TPGPLDF---RRGVIRFAP---NIPGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp ESSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred ecccEeC---CCCEEEcCC---CCCCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 9999974 345554333 456777899999999999 898 5899999999999986 35688999999
Q ss_pred ccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHH
Q 010895 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 252 GTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il 331 (498)
|||.+++++.+.+.+.+.++.+++.+||.++.+...|. |.+. .|+|.++|+..|-+.++...
T Consensus 133 GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~~g~~c~----------------cg~~--gclE~~~s~~~l~~~~~~~~ 194 (302)
T 3vov_A 133 STGIGGGVVLGGRVLRGERGQGGELGHLTLLPGGPACG----------------CGLE--GCLEALAAGRALERDATYAF 194 (302)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBSSTTCCBCT----------------TSCB--SBHHHHHSHHHHHHHHHHHH
T ss_pred CCceeEEEEECCEEeeCCCCCCccccceEecCCCCCCC----------------CCCc--chHHHHhCHHHHHHHHHHhh
Confidence 99999999999998888888888999998875433332 6664 49999999999877655421
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 411 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~A 411 (498)
. .+ + + ...+++. ++..+..|..+++++++++|
T Consensus 195 ~------------------~~--~--------------~---~~~i~~~-----------a~~gd~~a~~~~~~~~~~l~ 226 (302)
T 3vov_A 195 Q------------------RP--V--------------D---TRELFRL-----------FQAGDPKAERLVLQAARYVG 226 (302)
T ss_dssp T------------------SC--C--------------C---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHH
T ss_pred C------------------CC--C--------------C---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHH
Confidence 0 00 0 1 1223332 22223678889999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeceEe-cccHhHHHHHHHHHHHHhCcCCCccEEEE-EcCChhHHHHHHHHH
Q 010895 412 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLF-EHYTKFSACMQSTVKELLGEEVSETVVIE-HSNDGSGIGAALLAA 487 (498)
Q Consensus 412 a~iaai~~~~~~~~~~~~~~~~~~I~idGsv~-~~~p~f~~~l~~~l~~l~~~~~~~~i~l~-~~~Dgs~iGAAi~Aa 487 (498)
.+++++++.++| + .|.++|++. ...|.|.+.+++.+++...+.....|..- +.+|++.+|||.++.
T Consensus 227 ~~i~~l~~~~~p--------~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 227 IGLASLVKAFDP--------G--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHCC--------S--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC--------C--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 999999999998 3 577899999 88899999999999987654322333332 478899999998764
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.91 E-value=6.7e-23 Score=208.94 Aligned_cols=293 Identities=18% Similarity=0.191 Sum_probs=212.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|++++++.|+ ++.+. .++.|. .+.+++++.|.+.+.+++.+.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPT----DDYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCT----TCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 7999999999999999999875 55432 344443 2578899999999999887653 14678999
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhccccc----CCCcEEEEEE
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~----~~~~~iglIl 251 (498)
++.|++. .+|.+ .++ +++.+.+.++.+.|++.+ ++| +.|.||+++..+++.+. +.+..+.+++
T Consensus 88 ~pG~vd~---~~g~v-~~~---~~~~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDA---DDATV-LTV---NVPAAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECT---TTCCE-EES---SSGGGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeC---CCCEE-EcC---CCccccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 9999974 24544 333 344456789999999999 898 48999999999999863 5688999999
Q ss_pred ccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHH
Q 010895 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 252 GTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il 331 (498)
|||++++++.+.+.+.+.++.+++.+||.++.....+- + .++|- ..-.|.+ ..|+|.++|+..|-+..+...
T Consensus 155 GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~~~~~~----~-~~~~g-~~C~cG~--~gclE~~~S~~al~~~~~~~~ 226 (327)
T 4db3_A 155 GTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHL----G-DNAPL-LGCGCGK--KGCLDSYLSGRGFELLYAHYY 226 (327)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBCCHHHHHHT----C-TTCCC-CBCTTSC--BSBGGGTSSHHHHHHHHHHHH
T ss_pred CccceEEEEECCEEeecCCCcCcccccEEecccccccc----c-cccCC-CcCCCCC--cchhHhhhCHHHHHHHHHHhc
Confidence 99999999999988888888888999999875110000 0 00000 0012555 459999999999877655421
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 411 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~A 411 (498)
. +. + + ...+++. ++..+..|..+++++++++|
T Consensus 227 ----------~----~~------~--------------~---~~~i~~~-----------a~~gD~~a~~~~~~~~~~La 258 (327)
T 4db3_A 227 ----------G----EE------K--------------K---AIDIIKA-----------NAAGDEKAAEHVERFMELLA 258 (327)
T ss_dssp ----------S----CC------C--------------C---HHHHHHH-----------HHHTCHHHHHHHHHHHHHHH
T ss_pred ----------C----CC------C--------------C---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHH
Confidence 0 00 0 1 1223332 23334788899999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHHHHH
Q 010895 412 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAALLA 486 (498)
Q Consensus 412 a~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAAi~A 486 (498)
.+|+++++.++| + .|.++|++... +.|.+.+++.+++...+.. ..++++. .+|++.+|||.++
T Consensus 259 ~~i~~l~~~l~p--------~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~-~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 259 ICFGNIFTANDP--------H--VVALGGGLSNF-ELIYEEMPKRVPKYLLSVA-KCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp HHHHHHHHHHCC--------S--EEEEESGGGGC-THHHHHHHHHGGGGSCTTC-CCCEEEECSCGGGHHHHHHHHTT
T ss_pred HHHHHHHHHhCC--------C--EEEEeCcccch-HHHHHHHHHHHHHHhcccc-CCCEEEECCCCCcHHHHHHHHHH
Confidence 999999999998 3 47789999875 6788899999887754322 3456664 6788999998764
No 15
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.91 E-value=4.9e-23 Score=209.26 Aligned_cols=295 Identities=17% Similarity=0.180 Sum_probs=214.5
Q ss_pred ccceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcce
Q 010895 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (498)
Q Consensus 92 ~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (498)
...+++|+||+|||++|++++++.|+ ++.+. .++.|. . .+.+++++.|++.|.++++. . .+...
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~--~-~~~~~~~~~i~~~i~~~~~~-~-------~~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTAD--W-VNGIGFVESMKLEIGNFLKQ-Y-------PIVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHH--H-HTTTCHHHHHHHHHHHHHHH-C-------TTCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCC--C-CCHHHHHHHHHHHHHHHHhc-c-------CCeeE
Confidence 35678999999999999999999875 55432 233332 1 35678999999999999862 1 24678
Q ss_pred eeeEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEE
Q 010895 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIA 247 (498)
Q Consensus 172 lGftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~i 247 (498)
+|++++.|++. .+|.+...+ +++++.+.++.+.|++.+. ++| +.|.||+++..+++.+ ++.+..+
T Consensus 80 igi~~pG~vd~---~~g~v~~~~---~l~~w~~~~l~~~l~~~~~--~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v 148 (321)
T 3r8e_A 80 VGIGWPGLVSL---DRTKVILLP---NIPSVVNVPIVEILRSEFP--HIH---FKIENDAKCAALGEYYFGENKRMQTFI 148 (321)
T ss_dssp EEEEESSEECT---TSCCEEEBT---TBCCCCSCCHHHHHHHHCT--TSE---EEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred EEEEecccEEC---CCCEEEeCC---CCccccCCCHHHHHHHHcC--CCC---EEEEchHHHHHHHHHHhCCCCCCCcEE
Confidence 99999999963 356665443 4556777999998888662 566 5899999999999986 3568899
Q ss_pred EEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHH
Q 010895 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIV 327 (498)
Q Consensus 248 glIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~ 327 (498)
.+++|||++++++.+.+.+.+.++.+++.+||. +.. ..|+|.++|+..|-+..
T Consensus 149 ~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~-~~~--------------------------~gclE~~~S~~al~~~~ 201 (321)
T 3r8e_A 149 LLALGTGVGSGVMMNGKLFIGGRGNGTEVGHML-TTR--------------------------GKSLENQVGINHLIAYT 201 (321)
T ss_dssp EEEESSSEEEEEEETTEECCCTTSCCCCGGGCB-CTT--------------------------SSBSHHHHSHHHHHHHH
T ss_pred EEEECCceEEEEEECCEEecCCCCCCccccccc-CCC--------------------------CCcHHHhcCHHHHHHHH
Confidence 999999999999999988888877666777766 421 45999999999998877
Q ss_pred HHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHH
Q 010895 328 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGA 407 (498)
Q Consensus 328 R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA 407 (498)
+.....- .++.+ . +..+... ....+++. ++..+..|..++++++
T Consensus 202 ~~~~~~~----------~~~~~--~----------~~~~~~~---~~~~i~~~-----------a~~gD~~a~~~~~~~~ 245 (321)
T 3r8e_A 202 HEQLALD----------VAKKS--S----------LHTIAEL---SPKVIADH-----------AAQGDALALAVWADIG 245 (321)
T ss_dssp HHHHHHC----------TTCCC--S----------GGGCSSC---CHHHHHHH-----------HHTTCHHHHHHHHHHH
T ss_pred HHHhhcc----------Ccccc--c----------ccccccC---CHHHHHHH-----------HHcCCHHHHHHHHHHH
Confidence 7654320 01111 0 0000101 12333333 2233478889999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHHH
Q 010895 408 RLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAAL 484 (498)
Q Consensus 408 ~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAAi 484 (498)
+++|.+|+++++.++| + .|.++|++....+.|.+.+++.+++...+.....+++.. .+|++.+|||.
T Consensus 246 ~~La~~i~~l~~~ldP--------~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~ 315 (321)
T 3r8e_A 246 TIIGESLVNIVRVMDL--------N--NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAG 315 (321)
T ss_dssp HHHHHHHHHHHHHHCC--------C--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC--------C--EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHH
Confidence 9999999999999998 3 577899999988999999999999876432223456664 66889999998
Q ss_pred HH
Q 010895 485 LA 486 (498)
Q Consensus 485 ~A 486 (498)
++
T Consensus 316 l~ 317 (321)
T 3r8e_A 316 LI 317 (321)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 16
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.90 E-value=6e-23 Score=208.66 Aligned_cols=290 Identities=18% Similarity=0.184 Sum_probs=208.5
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeee
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGf 174 (498)
+.+|+||+|||++|++++++.|+ ++.+. .++.+. .+.+++++.|.+.+.++..+.+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 47999999999999999999875 55432 344443 1467899999999998876543 2456999
Q ss_pred EeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhccccc----CCCcEEEEE
Q 010895 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVI 250 (498)
Q Consensus 175 tFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~----~~~~~iglI 250 (498)
+++.|++. .+|++. ++ +.+.+.+.|+.+.|++.+ ++| +.|.||+++.++++.+. +.+..+.++
T Consensus 87 ~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 99999964 235443 33 455567789999999998 888 58999999999998763 467899999
Q ss_pred EccCceeeEEcccCccccccCCCCCCCcEEEeccCC----CcCCCCCCCccccccccccCCCCCcceeeeccccccHHHH
Q 010895 251 LGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWG----NFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEI 326 (498)
Q Consensus 251 lGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG----~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi 326 (498)
+|||++++++.+.+.+.+.++.+++.+||.++..++ .... .. --.|.+ ..|+|.++|+..|-+.
T Consensus 154 ~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~--------g~--~c~cG~--~gcle~~~s~~~l~~~ 221 (327)
T 2ap1_A 154 LGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFP--------LR--RCGCGQ--MGCIENYLSGRGFAWL 221 (327)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSC--------CC--BCTTSC--BSBTHHHHSHHHHHHH
T ss_pred ECCcEEEEEEECCEEeecCCCcccccccEEEecCcccccccccC--------CC--cCCCCc--hhhHHHHhCHHHHHHH
Confidence 999999999999988888888778889998875421 0000 00 012555 4599999999987665
Q ss_pred HHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH
Q 010895 327 VRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRG 406 (498)
Q Consensus 327 ~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~Ra 406 (498)
++... + .. . ....+++. ++..+..|..+++++
T Consensus 222 ~~~~~-----------~---~~--------------------~---~~~~i~~~-----------a~~gd~~a~~il~~~ 253 (327)
T 2ap1_A 222 YQHYY-----------D---QS--------------------L---QAPEIIAL-----------WEQGDEQAHAHVERY 253 (327)
T ss_dssp HHHHH-----------C---CC--------------------C---CHHHHHHH-----------HHTTCHHHHHHHHHH
T ss_pred HHHhc-----------C---CC--------------------C---CHHHHHHH-----------HHcCCHHHHHHHHHH
Confidence 44311 0 00 0 12223332 222237788899999
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHH
Q 010895 407 ARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAA 483 (498)
Q Consensus 407 A~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAA 483 (498)
++++|.+++++++.++| + .|.++|++....+.|.+ +++.+++...+ ....+.+.. .++++.+|||
T Consensus 254 ~~~La~~i~~l~~~l~p--------~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~~a~~~GAa 321 (327)
T 2ap1_A 254 LDLLAVCLGNILTIVDP--------D--LLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERARHGDAGGMRGAA 321 (327)
T ss_dssp HHHHHHHHHHHHHHHCC--------S--EEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEECSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--------C--EEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEcCCCCcHHHHHHH
Confidence 99999999999999998 3 47789999987665555 88877766543 223566665 5688999998
Q ss_pred HHH
Q 010895 484 LLA 486 (498)
Q Consensus 484 i~A 486 (498)
.++
T Consensus 322 ~la 324 (327)
T 2ap1_A 322 FLH 324 (327)
T ss_dssp HTT
T ss_pred HHH
Confidence 764
No 17
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.90 E-value=4.1e-22 Score=203.95 Aligned_cols=303 Identities=19% Similarity=0.195 Sum_probs=213.5
Q ss_pred ceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceee
Q 010895 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (498)
..++|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|.+.+.+++++.... ..+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNP-----KTYEERINLILQMCVEAAAEAVKL----NCRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECC-----SSHHHHHHHHHHHHHHHHHHHHHT----TEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCC-----CCHHHHHHHHHHHHHHHHHhcccc----cCceEEEE
Confidence 468999999999999999999875 55432 23333 246788999999999998764321 12356788
Q ss_pred eEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEE
Q 010895 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (498)
Q Consensus 174 ftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~igl 249 (498)
++++.|++. ++|.++.-+. ..+++.+.|+.+.|++.+ ++| +.|.||+++.++++.+ .+.+..+.+
T Consensus 95 i~~pG~vd~---~~g~v~~~~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~i 163 (343)
T 2yhw_A 95 ISTGGRVNP---REGIVLHSTK--LIQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFVTL 163 (343)
T ss_dssp EEESSEEET---TTTEEEECCT--TSSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEEEE
T ss_pred EecccCEeC---CCCEEEeCCc--CCCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 888888874 3465543221 124566789999999998 888 5899999999999975 356789999
Q ss_pred EEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHH
Q 010895 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRR 329 (498)
Q Consensus 250 IlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~ 329 (498)
++|||++++++.+.+.+.+.++.+++.+||.++.++..|. |.+.| |+|.++|+..|-+.++.
T Consensus 164 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~----------------cG~~g--clE~~~s~~al~~~~~~ 225 (343)
T 2yhw_A 164 ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLXGPDCS----------------CGSHG--CIEAYASGMALQREAKK 225 (343)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC--CBCT----------------TSCBS--BHHHHHSHHHHHHHHHH
T ss_pred EECCCEEEEEEECCEEecCCCCcccccCCEEEccCCCcCC----------------CCCCC--cHHHhcCHHHHHHHHHH
Confidence 9999999999999998888888778899999875443443 56644 99999999999877665
Q ss_pred HHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010895 330 VLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARL 409 (498)
Q Consensus 330 il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l 409 (498)
... .. +..+.. .. ...+. .. ....+++. ++..+..|..++++++++
T Consensus 226 ~~~----~~-------~~~~~~-~~--------~~~~~--~~-~~~~v~~~-----------a~~gd~~a~~il~~~~~~ 271 (343)
T 2yhw_A 226 LHD----ED-------LLLVEG-MS--------VPKDE--AV-GALHLIQA-----------AKLGNAKAQSILRTAGTA 271 (343)
T ss_dssp HHH----TT-------CSCCTT-CC--------C------CC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHH
T ss_pred hhc----cc-------cccccc-cc--------ccccc--cC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHH
Confidence 332 10 000000 00 00000 00 12333333 233347888999999999
Q ss_pred HHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE--cCChhHHHHHHHHH
Q 010895 410 SAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH--SNDGSGIGAALLAA 487 (498)
Q Consensus 410 ~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~--~~Dgs~iGAAi~Aa 487 (498)
+|.+|+++++.++| + .|.++|++. +.|.+.+++.+++...+. ...+.+.. ..|.+.+|||.++.
T Consensus 272 La~~i~~l~~~l~P--------~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~~GAa~l~~ 337 (343)
T 2yhw_A 272 LGLGVVNILHTMNP--------S--LVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVSDLVDPALLGAASMVL 337 (343)
T ss_dssp HHHHHHHHHHHTCC--------S--EEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--------C--EEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEccCCCchHHHHHHHHH
Confidence 99999999999998 3 477899985 678888888888764332 22455554 36778999998764
No 18
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.90 E-value=2.8e-22 Score=201.64 Aligned_cols=280 Identities=15% Similarity=0.178 Sum_probs=203.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|++++++.|+ ++.+. .++.|. .+.+++++.+.+ ++++. .+...+|++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhc--------CCeeEEEEe
Confidence 6899999999999999999875 55432 344432 234556655544 44332 235789999
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEEEE
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~iglIl 251 (498)
++.|++. ++|.+..-+ +++++.+.|+.+.|++.+ ++| +.+.||+++..+++.+ ++.+..+.+++
T Consensus 64 ~pG~vd~---~~g~v~~~~---~l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNP---KTGLITMGG---AIRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECT---TTCEEEECT---TCGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeC---CCCEEEeCC---CCCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9999974 356664332 445567789999999999 899 5899999999999986 45788999999
Q ss_pred ccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHH
Q 010895 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 252 GTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il 331 (498)
|||++++++.+.+.+.+.++.+++.+||+++...+ ..+|..|+|.++|+..|-+..+...
T Consensus 132 GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~--------------------~~~~~~~le~~~s~~~l~~~~~~~~ 191 (297)
T 4htl_A 132 GTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGA--------------------FRPGKYTLNETTTMLVLRRQYAELT 191 (297)
T ss_dssp SSSEEEEEEETTEECCCTTSCCCCGGGSBSSCCCS--------------------SCGGGGBHHHHSSHHHHHHHHHHHH
T ss_pred CcceEEEEEECCEEEecCCCCcccccceEecCCCC--------------------cCcccCcHHHhccHHHHHHHHHHHh
Confidence 99999999999998888888888889998763211 1235679999999999876554321
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 411 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~A 411 (498)
. .+. ..+ ....+++. ++..+..|..+++++++++|
T Consensus 192 ~------------~~~-----~~~-----------------~~~~i~~~-----------a~~gd~~a~~~~~~~~~~La 226 (297)
T 4htl_A 192 G------------RPL-----EEI-----------------TGEEIFAN-----------YDAHDAVSERLITEFYTGIC 226 (297)
T ss_dssp C------------CCG-----GGC-----------------CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHH
T ss_pred c------------CCc-----cCC-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHH
Confidence 0 000 000 12233332 22334778899999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE---EcCChhHHHHHHHHHH
Q 010895 412 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE---HSNDGSGIGAALLAAS 488 (498)
Q Consensus 412 a~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~---~~~Dgs~iGAAi~Aa~ 488 (498)
.+|+++++.++| + .|.++|++.+. |.|.+.+++.++.... ..+.++ +.+|++.+|||.++.-
T Consensus 227 ~~i~~l~~~~~p--------~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 227 TGLYNLIYLFDP--------T--HIFIGGGITSR-PTFIAELKHHMESFGL----RDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp HHHHHHHHHHCC--------S--EEEEESGGGGS-TTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--------C--EEEEeCccccc-HHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHHhHHHHHHH
Confidence 999999999998 3 47789999875 7899999998876532 234554 4788999999987753
No 19
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.89 E-value=7e-23 Score=204.33 Aligned_cols=278 Identities=17% Similarity=0.151 Sum_probs=201.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|++++++.|+ ++.+. .++.+.. .+.+++++.|.+.+.+++.+ ...+|++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999998775 55432 3444331 24678888888877766532 1358999
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhccccc----CCCcEEEEEE
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~----~~~~~iglIl 251 (498)
++.|++. +++.+. ++- +++++.+.|+.+.|++.+ ++| +.+.||+++.++++.+. +. ..+.+++
T Consensus 63 ~pG~vd~---~~g~v~-~~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~ 129 (289)
T 2aa4_A 63 STGIIRD---GSLLAL-NPH--NLGGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDIT-DMVFITV 129 (289)
T ss_dssp ESSEEET---TEEECS-SGG--GGGGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEE
T ss_pred eccceeC---CCCEEE-eCC--CCCcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEe
Confidence 9999974 344442 222 334566789999999998 888 58999999999999763 34 8999999
Q ss_pred ccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHH
Q 010895 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 252 GTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il 331 (498)
|||++++++.+.+.+.+.++.+++.+||.++..+..|. |.+. +|+|.++|+..|-+..+.
T Consensus 130 GtGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~----------------cG~~--gcle~~~s~~~l~~~~~~-- 189 (289)
T 2aa4_A 130 STGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCG----------------CGRT--GCVEAIASGRGIAAAAQG-- 189 (289)
T ss_dssp SSSEEEEEEETTEEECCTTSCCCCGGGSBSCTTSCBCT----------------TSCB--SBHHHHHSHHHHHHTCCG--
T ss_pred CccEEEEEEECCEEeeCCCCCCccCCcEEECCCCCcCC----------------CCCc--hhHHHHhCHHHHHHHHHH--
Confidence 99999999999988888888778889998876544443 5564 499999999766332110
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 411 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~A 411 (498)
+.. + .+ ...+++. ++..+..|..+++++++++|
T Consensus 190 -----------------~~~--------------~--~~---~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~ 222 (289)
T 2aa4_A 190 -----------------ELA--------------G--AD---AKTIFTR-----------AGQGDEQAQQLIHRSARTLA 222 (289)
T ss_dssp -----------------GGT--------------T--CC---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHH
T ss_pred -----------------hcc--------------C--CC---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHH
Confidence 000 0 01 2223332 22223778899999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEE---cCChhHHHHHHHH
Q 010895 412 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAALLA 486 (498)
Q Consensus 412 a~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~---~~Dgs~iGAAi~A 486 (498)
.+++++++.++| + .|.++|++. ..|.|.+.+++.+++...+ ..+.+.. .+|++.+|||.++
T Consensus 223 ~~i~~l~~~l~p--------~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 223 RLIADIKATTDC--------Q--CVVVGGSVG-LAEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHCC--------S--EEEEEHHHH-TSTTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--------C--EEEEeCccc-ccHHHHHHHHHHHHHhcCc---cCCEEEECCCCCchHHHHHHHHH
Confidence 999999999998 3 477999998 7899999999998775322 1344443 6788999999876
No 20
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.88 E-value=2.6e-21 Score=195.92 Aligned_cols=285 Identities=17% Similarity=0.163 Sum_probs=181.2
Q ss_pred cceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
+.+++|+||+|||++|++++++.|+ ++.+. +.+.|+ ...+++++.|.+.+.+++++.+. +...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~-------~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAE----VIAPGLVSGIGEMIDEQLRRFNA-------RCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHH----HHTTCHHHHHHHHHHHHHHHHTE-------EEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCcc----ccHHHHHHHHHHHHHHHHHhcCC-------CeeEE
Confidence 4678999999999999999999885 55432 233332 12457888898888888776531 25778
Q ss_pred eeEeeeeeeeccCCceEEEccCCccccCCC--CCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc---cCCCcEE
Q 010895 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDT--VGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAIA 247 (498)
Q Consensus 173 GftFSfP~~q~~i~~g~Li~wtKgF~~~~~--~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay---~~~~~~i 247 (498)
|++.+.|++. ++|.+...+ +++.. .+.++.+.|++.+ ++| +.+.||+++.++++.+ .+.+..+
T Consensus 69 gi~~pG~vd~---~~g~v~~~~---~l~~~~~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 69 VMGFPALVSK---DKRTIISTP---NLPLTAADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEESSCBCT---TSSCBCSCC---SSSCCHHHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEeccccEeC---CCCEEEeCC---CCCCccccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceEE
Confidence 8888888864 234332221 12111 1257889999988 898 5899999998876543 3457789
Q ss_pred EEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHH
Q 010895 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIV 327 (498)
Q Consensus 248 glIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~ 327 (498)
.+.+|||++++++.+.+.+.+.++.++|.+||.|+.....|. |++. +|+|.++||..|-+..
T Consensus 137 ~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~C~----------------cG~~--GclE~~~S~~al~~~~ 198 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCA----------------CGNP--GCLETNCSGMALRRWY 198 (310)
T ss_dssp EEEESSSEEEEEEETTEEECCSSSCCCC---------------------------------------CCSSSHHHHHHHH
T ss_pred EEEeceeEEEEEEECCEEeecCCCCceeCcceEeCCCCCcCC----------------CCCC--ceehhhhCHHHHHHHH
Confidence 999999999999999999999888888999999975433443 6664 5999999999875422
Q ss_pred HHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHH
Q 010895 328 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGA 407 (498)
Q Consensus 328 R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA 407 (498)
+. .++. ++. .++++. .. .+ ..++.++++.
T Consensus 199 ~~---------------~~~~------~~~-----------------~~~~~~-~~---~d--------~~~~~~~~~~- 227 (310)
T 3htv_A 199 EQ---------------QPRN------YPL-----------------RDLFVH-AE---NA--------PFVQSLLENA- 227 (310)
T ss_dssp TT---------------SCCS------SCG-----------------GGHHHH-HT---TC--------HHHHHHHHHH-
T ss_pred Hh---------------ccCC------CCH-----------------HHHHHH-Hc---CC--------hHHHHHHHHH-
Confidence 11 0000 010 111211 00 11 2344444444
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhC-cCCCccEEEEE---cCChhHHHHH
Q 010895 408 RLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLG-EEVSETVVIEH---SNDGSGIGAA 483 (498)
Q Consensus 408 ~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~-~~~~~~i~l~~---~~Dgs~iGAA 483 (498)
|.+|+.+++.++| + .|.++|++.+..+.+.+.+.+.+++.+. +.....++++. .+|++.+|||
T Consensus 228 ---a~~la~l~~~~dP--------~--~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa 294 (310)
T 3htv_A 228 ---ARAIATSINLFDP--------D--AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAA 294 (310)
T ss_dssp ---HHHHHHHHHHHCC--------S--EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHH
T ss_pred ---HHHHHHHHHhhCC--------C--EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHH
Confidence 4467888899998 3 5789999998888888888888887653 21123566664 6799999999
Q ss_pred HHHH
Q 010895 484 LLAA 487 (498)
Q Consensus 484 i~Aa 487 (498)
.++.
T Consensus 295 ~la~ 298 (310)
T 3htv_A 295 ILAH 298 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 21
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.87 E-value=3.6e-21 Score=199.25 Aligned_cols=279 Identities=14% Similarity=0.089 Sum_probs=199.4
Q ss_pred cceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHH---HHHHHHHhcCCCCCCCCCCc
Q 010895 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (498)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~---~I~~fl~~~~~~~~~~~~~~ 169 (498)
+.+++|++|+|||++|+++++ .|+ ++.+. ..++.+.. +.+++++.|++ .+.++++ .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 456899999999999999999 774 44221 02344332 57888998888 6655432 235
Q ss_pred ceeeeEeeeeeeeccCCceEEEccCCccccCCCC-CCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccC------
Q 010895 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------ 242 (498)
Q Consensus 170 ~~lGftFSfP~~q~~i~~g~Li~wtKgF~~~~~~-G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~------ 242 (498)
..+|++++.|++. .+|++..-+ ++++|. |.|+.+.|++.+ ++| |.|.||+++..+++.+..
T Consensus 68 ~gIGIavPG~Vd~---~~G~i~~~~---nlp~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADY---QAGIIGDLP---NFPSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEET---TTTEECCCT---TCGGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeC---CCCEEEeCC---CcccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcccc
Confidence 7899999999974 356664333 456677 899999999999 999 589999999999997643
Q ss_pred -----------CCcEEEEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCc
Q 010895 243 -----------KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGE 311 (498)
Q Consensus 243 -----------~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~ 311 (498)
.+..+.+.+|||.+++++.+.+.+.+.++.++|.+||. | . |.+.
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~----~------------------CG~~-- 190 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N----K------------------KYPE-- 190 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C----S------------------SCTT--
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C----C------------------CCCC--
Confidence 57899999999999999999998888888788888887 4 2 4453
Q ss_pred ceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHH
Q 010895 312 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKM 391 (498)
Q Consensus 312 q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d 391 (498)
.|+|.++|+..|-+..+.... .++ ..+ ..++++..-+..
T Consensus 191 GclE~~~S~~al~~~~~~~~~------------~~~--------------------~~~---~~~i~~~a~~~~------ 229 (366)
T 3mcp_A 191 YIVEESVSIRAVMRVYAERSG------------DAG--------------------ART---PKEIFEIAEGIR------ 229 (366)
T ss_dssp SBGGGTSSHHHHHHHHHHHSS------------CCS--------------------CCC---HHHHHHHHHTSS------
T ss_pred cceeeeecHHHHHHHHHHhhC------------CCC--------------------CCC---HHHHHHHHhhhh------
Confidence 599999999999776654210 000 001 222333200000
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEE
Q 010895 392 RKLVV-ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVV 470 (498)
Q Consensus 392 ~~~~~-~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~ 470 (498)
..+ ..|..+++++++++|.+|+++++.++| .|.++|++....+.|.+.+++.+++.+.+.....++
T Consensus 230 --~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ldP-----------~IviGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 296 (366)
T 3mcp_A 230 --PGNREAAIAAFEELGEMAGDALASAITLIDG-----------LIVIGGGLSGASKYILPVLLKEMNAQTGMMDGARFG 296 (366)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHHHHHHHHCS-----------EEEEESGGGGGHHHHHHHHHHHHHHHTTCC------
T ss_pred --cCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------EEEEEChhhhchHHHHHHHHHHHHHhcchhccCCce
Confidence 123 677889999999999999999999985 588999999999999999999999887654444565
Q ss_pred EE---EcCChhHHH
Q 010895 471 IE---HSNDGSGIG 481 (498)
Q Consensus 471 l~---~~~Dgs~iG 481 (498)
+. +.+.+...+
T Consensus 297 i~~s~~~~~~~~~~ 310 (366)
T 3mcp_A 297 RLQKEVYDLDEEKS 310 (366)
T ss_dssp --CCEEEETTSHHH
T ss_pred EEEeecCCchhHHH
Confidence 54 344444443
No 22
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.86 E-value=1.2e-20 Score=188.60 Aligned_cols=275 Identities=19% Similarity=0.220 Sum_probs=194.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|.+.+.+ . +...+|++
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~----~---------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQRLSE----Q---------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHHHTT----S---------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHHHHh----C---------CCcEEEEE
Confidence 4899999999999999998775 55432 23333 2456666666554443 1 24679999
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc--cCCCcEEEEEEcc
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVILGT 253 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay--~~~~~~iglIlGT 253 (498)
.+.|++. .+|.+...+ +++++.+.++.+.| +.+ ++| +.+.||+++.++++.+ .+.+..+.+++||
T Consensus 62 ~pG~vd~---~~g~v~~~~---~~~~~~~~~l~~~l-~~~---~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQ---ETGVIDGFS---AVPYIHGFSWYEAL-SSY---QLP---VHLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECT---TTCBEESCC---SSGGGSSSBHHHHT-GGG---CCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccC---CCCEEEecC---CCCcccCCCHHHHH-HHc---CCC---EEEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 9999974 245554322 23345568898888 777 888 5899999999999865 4667899999999
Q ss_pred CceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHH
Q 010895 254 GTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 333 (498)
Q Consensus 254 GtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~ 333 (498)
|++++++.+.+.+.+.++.+++.+||.++. ++ + +..|+|.++|+..|-+.++...
T Consensus 129 GiG~giv~~G~l~~G~~g~aGEiGh~~~~~----~~----------------~---~~gcle~~~s~~~l~~~~~~~~-- 183 (292)
T 2gup_A 129 GIGGAMIINGRLHRGRHGLGGEFGYMTTLA----PA----------------E---KLNNWSQLASTGNMVRYVIEKS-- 183 (292)
T ss_dssp SEEEEEEETTEEECCTTSCTTCGGGCBSSC----CS----------------S---SCCBHHHHHSHHHHHHHHHHHH--
T ss_pred ceEEEEEECCEEEecCCCCCccceeEEecc----CC----------------C---CCCcHHHhcCHHHHHHHHHHhh--
Confidence 999999999988888777777888887753 10 1 2469999999988765444311
Q ss_pred HHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 334 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAG 413 (498)
Q Consensus 334 ~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~ 413 (498)
+ . + . + + ...+++. ++..+..|..+++++++++|.+
T Consensus 184 ----~-----~-~-~------~--------------~---~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~ 218 (292)
T 2gup_A 184 ----G-----H-T-D------W--------------D---GRKIYQE-----------AAAGNILCQEAIERMNRNLAQG 218 (292)
T ss_dssp ----S-----S-C-C------C--------------C---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHH
T ss_pred ----C-----C-C-C------C--------------C---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0 0 1 1223322 2223377888999999999999
Q ss_pred HHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCC--ccEEEE---EcCChhHHHHHHHHH
Q 010895 414 IVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVS--ETVVIE---HSNDGSGIGAALLAA 487 (498)
Q Consensus 414 iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~--~~i~l~---~~~Dgs~iGAAi~Aa 487 (498)
|+++++.++| + .|.++|++. ..|.|.+.+++.+++...+... ..+.+. +.+|++.+|||.++.
T Consensus 219 i~~l~~~l~p--------~--~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 219 LLNIQYLIDP--------G--VISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp HHHHHHHHCC--------S--EEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHhCC--------C--EEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 9999999998 3 477899996 5799999999999876532111 123344 468889999998764
No 23
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.85 E-value=1.4e-20 Score=189.92 Aligned_cols=268 Identities=15% Similarity=0.186 Sum_probs=188.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
.+|+||+|||++|++++++.|+ ++.+. ++|.. +.+++++.|++. +++. +...+|++
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~----~~~t~----~~~~~l~~i~~~----~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI----EFPTX----MPDETIEXVIQY----FSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE----EEECC----CHHHHHHHHHHH----HTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE----EecCC----ChHHHHHHHHHH----hccC---------CceEEEEE
Confidence 6899999999999999999875 55432 23331 355666655543 3321 25789999
Q ss_pred eeeeeeecc--CCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc----cCCCcEEEE
Q 010895 176 FSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (498)
Q Consensus 176 FSfP~~q~~--i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay----~~~~~~igl 249 (498)
++.|++... ...|.+...+ ..+|.+.|+.+.|++.+ ++| +.+.||+++..+++.+ ++.++.+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 999997532 1225554332 24677899999999999 899 5899999999999986 356889999
Q ss_pred EEccCceeeEEcccCccccccCCCCCCCcEEEeccCC-CcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHH
Q 010895 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWG-NFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVR 328 (498)
Q Consensus 250 IlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG-~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R 328 (498)
.+|||++++++.+.+.+.+.+ +++.+||.++.... .+. ..|...+ .|+|.++|+..|-+..+
T Consensus 130 ~~GtGiG~gii~~G~l~~G~~--agEiGh~~v~~~~~~~~~--------------~~C~~~~-gclE~~~S~~al~~~~~ 192 (302)
T 3epq_A 130 TIGTGIGAGAIVEGRLLQGLS--HPEMGHIYIRRHPDDVYQ--------------GXCPYHG-DCFEGLASGPAIEARWG 192 (302)
T ss_dssp EESSSEEEEEEETTEECCSSS--CCCGGGCCCCCCTTCCCC--------------CSBTTTB-SSHHHHHSHHHHHHHHS
T ss_pred EECCceEEEEEECCEEcccCC--CCccceEEEecCCCCCcC--------------cccCCCC-cchhhhCCHHHHHHHhh
Confidence 999999999999988877754 36888888864311 010 1133322 69999999998854321
Q ss_pred HHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHH
Q 010895 329 RVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGAR 408 (498)
Q Consensus 329 ~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 408 (498)
. . . .. +. . +..+.+++++
T Consensus 193 ~---------------~-------~----~~---~~---------------~------------------~~~~~~~~~~ 210 (302)
T 3epq_A 193 X---------------K-------A----AD---LS---------------D------------------IAQVWELEGY 210 (302)
T ss_dssp S---------------C-------G----GG---GT---------------T------------------CHHHHHHHHH
T ss_pred c---------------c-------c----cc---cc---------------c------------------hHHHHHHHHH
Confidence 0 0 0 00 00 0 1235678899
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCC-------ccEEEE---EcCChh
Q 010895 409 LSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVS-------ETVVIE---HSNDGS 478 (498)
Q Consensus 409 l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~-------~~i~l~---~~~Dgs 478 (498)
++|.+|+++++.++| + .|.++|++... +.|.+.+++.+++.+..... ..+.++ +.+|++
T Consensus 211 ~La~~i~nl~~~ldP--------e--~IviGGgi~~~-~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~ 279 (302)
T 3epq_A 211 YIAQALAQYILILAP--------X--XIILGGGVMQQ-XQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAG 279 (302)
T ss_dssp HHHHHHHHHHHHTCC--------S--CEEEESSGGGC-THHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHH
T ss_pred HHHHHHHHHHHHHCc--------h--hhhcCchhhhh-HHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHH
Confidence 999999999999998 3 47789999876 45889999999887532100 122344 478999
Q ss_pred HHHHHHHHH
Q 010895 479 GIGAALLAA 487 (498)
Q Consensus 479 ~iGAAi~Aa 487 (498)
.+|||.++.
T Consensus 280 l~GAa~l~~ 288 (302)
T 3epq_A 280 IIGTLVLAH 288 (302)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 24
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.83 E-value=1.9e-19 Score=183.65 Aligned_cols=291 Identities=14% Similarity=0.150 Sum_probs=184.4
Q ss_pred ceeEEEEEeCCceEEEEEEEe-CCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 94 KGLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l-~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
.+++|++|+|||++|++++++ ++. +... .++|+.. .+. +.+.|.+++++.+. +...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~~----~~~~~~~----~~~----~~~~i~~~~~~~~~-------~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQA----KTYSGLD----YPS----LEAVIRVYLEEHKV-------EVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEEE----EEEEGGG----CSC----HHHHHHHHHHHSCC-------CCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEEE----EEecCCC----cCC----HHHHHHHHHHhcCC-------CccEE
Confidence 568999999999999999997 453 4432 2233321 122 33445556655431 25679
Q ss_pred eeEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhccccc-----------
Q 010895 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----------- 241 (498)
Q Consensus 173 GftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~----------- 241 (498)
|+.++.|++. +.+ ..+ ++ ++. .+ .+.|++.+ ++| .|.|.||+++..+++.+.
T Consensus 71 gi~~pG~vd~-----~~~-~~~---nl-~w~-~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g 133 (332)
T 1sz2_A 71 CIAIACPITG-----DWV-AMT---NH-TWA-FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGA 133 (332)
T ss_dssp EEEESSCCCS-----SEE-CCS---SS-CCC-EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSC
T ss_pred EEEEeCceeC-----CEE-eee---CC-CCc-CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCC
Confidence 9999999972 232 222 22 233 56 57888888 887 148999999999999853
Q ss_pred ---CCCcEEEEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccc-cccCCCCCcceeeec
Q 010895 242 ---NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEAL-DTESLNPGEQIFEKI 317 (498)
Q Consensus 242 ---~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~-D~~s~nPG~q~fEkm 317 (498)
+.+..+.+++|||.+++++.+.+ .++++.+.|.+||.++.... .+..+ ..-|.+-|..|+|.+
T Consensus 134 ~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v~~~~~-----------~~~~l~~~~c~~~g~gclE~~ 200 (332)
T 1sz2_A 134 EPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDFAPNSE-----------EEAIILEILRAEIGHVSAERV 200 (332)
T ss_dssp CCCTTCCEEEEEESSSEEEEEEEEET--TEEEEEECCGGGSBCCCCSH-----------HHHHHHHHHHHHSSSCBGGGT
T ss_pred CCCCCCcEEEEEcCccceEEEEecCC--CCeeeCCCCccccCcCCCCh-----------HHHHHHHHHHhccCCcchhhh
Confidence 45778999999999999999876 55555556777776643110 00000 000112234699999
Q ss_pred cccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHH-H
Q 010895 318 ISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLV-V 396 (498)
Q Consensus 318 ~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~-~ 396 (498)
+||..|-+..+...... ...+ . .. ....+++. ++.. +
T Consensus 201 ~S~~~l~~~~~~~~~~~--------~~~~------~--------------~~---~~~~i~~~-----------a~~G~D 238 (332)
T 1sz2_A 201 LSGPGLVNLYRAIVKAD--------NRLP------E--------------NL---KPKDITER-----------ALADSC 238 (332)
T ss_dssp SSHHHHHHHHHHHHHHT--------TCCC------C--------------CC---CHHHHHHH-----------HHHTCC
T ss_pred ccHHHHHHHHHHHhhcc--------CCCc------c--------------CC---CHHHHHHH-----------HHcCCC
Confidence 99999988776532210 0000 0 00 12333433 3334 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEeccc-HhHH-HHHHHHHHH--HhCc-CCCccEEE
Q 010895 397 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY-TKFS-ACMQSTVKE--LLGE-EVSETVVI 471 (498)
Q Consensus 397 ~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~-p~f~-~~l~~~l~~--l~~~-~~~~~i~l 471 (498)
..|..+++++++++|.+|+++++.++| +. -|.+.|++.... +.|. +.+++.+++ .+.. .....|.+
T Consensus 239 ~~A~~~~~~~~~~Lg~~i~~l~~~l~P--------~~-gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 309 (332)
T 1sz2_A 239 TDCRRALSLFCVIMGRFGGNLALNLGT--------FG-GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYL 309 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--------TT-EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC--------Ce-EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEE
Confidence 788999999999999999999999998 32 267899998864 4443 346666653 1111 01124555
Q ss_pred EEcCChhHHHHHHHHH
Q 010895 472 EHSNDGSGIGAALLAA 487 (498)
Q Consensus 472 ~~~~Dgs~iGAAi~Aa 487 (498)
...+|++.+|||.++.
T Consensus 310 ~~~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 310 IVHDNPGLLGSGAHLR 325 (332)
T ss_dssp ECCSCHHHHHHHHHHH
T ss_pred EECCchhHHHHHHHHH
Confidence 5688999999998764
No 25
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.83 E-value=2.4e-20 Score=193.18 Aligned_cols=295 Identities=14% Similarity=0.039 Sum_probs=192.7
Q ss_pred ceeEEEEEeCCceEEEEEEEe----CCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 010895 94 KGLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l----~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (498)
.+++|++|+|||++|++++++ .|+ ++.+. + ..|. .+.+++++.|++.+.++..... .+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~---il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVH---ACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEE---EEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCcc---EEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------ccc
Confidence 357999999999999999999 553 55332 1 1343 2467788888888877544321 135
Q ss_pred ceeeeEeeeeeeeccCCceEEEccCCccccCCCCCC-cHHHHHHHHHHHcCC-CeeEEEEEechHHHHhc----------
Q 010895 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGL-DMRVAALVNDTIGTLAG---------- 237 (498)
Q Consensus 170 ~~lGftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~~~~l-~v~vvaivNDTvatlla---------- 237 (498)
..+|+.++.|++. |.+. .+ .+++.+. |+.+++++.+ ++ | +.+.||+++..++
T Consensus 91 ~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~~~---~~~p---v~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 91 KAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKALF---PPGH---SAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTTTS---CTTS---EEEEEHHHHHHHHHHHHHHTTCH
T ss_pred cEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHHhc---CCCC---EEEEccHhHHhccccccChhhhc
Confidence 6789999999975 3332 11 2233444 7776766655 76 7 5899999999999
Q ss_pred -----cccc----------------CCCcEEEEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCc
Q 010895 238 -----GRYH----------------NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT 296 (498)
Q Consensus 238 -----~ay~----------------~~~~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T 296 (498)
+.+. +.+..+.+++|||.+++++.+.+.+.+.++.+++.+||.++.... |..
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~-c~c------ 227 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPMRKD-IDY------ 227 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCCSSC-HHH------
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecCCCCC-cch------
Confidence 4542 347899999999999999999887777666556777777764322 320
Q ss_pred cccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHH
Q 010895 297 EYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGK 376 (498)
Q Consensus 297 ~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~ 376 (498)
...+-.... +..|+|.++||..|-++.+... .+ . ++. . ....
T Consensus 228 --g~~l~~~~~--~~g~lE~~~S~~~l~~~~~~~~-----~~-----~-~~~--------------------~---~~~~ 269 (373)
T 2q2r_A 228 --IQTLHAELK--LFPNYENMVSGAGLEFHYRQVV-----RG-----S-RPP--------------------C---SAGE 269 (373)
T ss_dssp --HHHHHHHHT--SCCBHHHHSSHHHHHHHHHHHH-----TT-----S-SCC--------------------C---CHHH
T ss_pred --hHHHHHHhh--ccccHhHhcCHHHHHHHHHHHh-----cC-----C-CCC--------------------C---CHHH
Confidence 000000001 1469999999999987665421 01 0 000 0 1223
Q ss_pred HHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHH--HHH
Q 010895 377 KLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA--CMQ 454 (498)
Q Consensus 377 il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~--~l~ 454 (498)
+++. ++..+..|..+++++++++|.+++++++.++| + .|.+.||.+...+.|.+ .++
T Consensus 270 i~~~-----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~p--------~--~IvlgGG~~~~~~~~~~~~~i~ 328 (373)
T 2q2r_A 270 IAKL-----------ASEGDANACKAMKKYHEYLMRVGSEASMALLP--------L--TIVLVGDNIVNNAFFYRNPQNL 328 (373)
T ss_dssp HHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEECSHHHHHTHHHHHSHHHH
T ss_pred HHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEeCChHhCchhhhcchhHH
Confidence 3332 22223778899999999999999999999998 3 47787884444588888 888
Q ss_pred HHHHHHhCcCC------CccEEEE---EcCChhHHHHHHHHH
Q 010895 455 STVKELLGEEV------SETVVIE---HSNDGSGIGAALLAA 487 (498)
Q Consensus 455 ~~l~~l~~~~~------~~~i~l~---~~~Dgs~iGAAi~Aa 487 (498)
+.+++.+.+.. ...+.+. +.+|++.+|||.++.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~ 370 (373)
T 2q2r_A 329 KEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGL 370 (373)
T ss_dssp HHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHH
Confidence 88887643321 1234443 467999999998763
No 26
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.80 E-value=4e-18 Score=174.06 Aligned_cols=303 Identities=15% Similarity=0.178 Sum_probs=183.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec-CCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCC-Ccceee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPG-RQRELG 173 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i-p~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~-~~~~lG 173 (498)
++|+||+|||++|++++++.|+ ++.+ ..+ +......+.+++++.|++.|.+++++.+.. .. +...+|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~----~~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAE----ADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVD----PLVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEE----EEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCC----TTCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEE----EeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCC----cccceeEEE
Confidence 7899999999999999999875 5533 223 222211357889999999999999876532 22 457788
Q ss_pred eEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEcc
Q 010895 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (498)
Q Consensus 174 ftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGT 253 (498)
++.+.|++.. + +.++.+.|++.+...++| +.|.||+++++++ .| .+..+.+++||
T Consensus 76 i~~pG~vd~~--------~-----------~~~l~~~l~~~~~~~~~p---v~v~NDa~aaa~a-~~--~~~~v~v~~GT 130 (347)
T 2ch5_A 76 LSLSGGDQED--------A-----------GRILIEELRDRFPYLSES---YLITTDAAGSIAT-AT--PDGGVVLISGT 130 (347)
T ss_dssp EEETTTTCHH--------H-----------HHHHHHHHHHHCTTSBSC---EEEEEHHHHHHHH-HC--SSCEEEEEESS
T ss_pred EeccCCCchH--------H-----------HHHHHHHHHHhcCCCCce---EEEECcHHHHHHh-hC--CCCcEEEEEcC
Confidence 8888888643 1 245666666665111267 5899999999999 45 36789999999
Q ss_pred CceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeee-ccccccHHHHHHHHHH
Q 010895 254 GTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEK-IISGMYLGEIVRRVLC 332 (498)
Q Consensus 254 GtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEk-m~SG~YLgEi~R~il~ 332 (498)
|++++++.+ .+..+-.-+|| |+|- ..||.|++........
T Consensus 131 Gig~~~v~~-------------~G~~c~cG~~G--------------------------~l~~de~s~~~i~~~~~~~~~ 171 (347)
T 2ch5_A 131 GSNCRLINP-------------DGSESGCGGWG--------------------------HMMGDEGSAYWIAHQAVKIVF 171 (347)
T ss_dssp SEEEEEECT-------------TSCEEEEECCC--------------------------TTTCCTTSHHHHHHHHHHHHH
T ss_pred CceeEEEcC-------------CCCEEecCCcC--------------------------cccCCCccHHHHHHHHHHHHH
Confidence 999987642 12222111222 5554 5688888865544332
Q ss_pred HHHhccCCCCCCCC-CCcC----CCCccCc--hhhhccccCCC-CChH-HHHHHHHhhhccCCCCHHHHHHHHHHHHHHH
Q 010895 333 RMAEEANFFGDTVP-PKLK----IPFILRT--PHMSAMHHDTS-PDLR-VVGKKLKDILEISNTSLKMRKLVVELCDIVA 403 (498)
Q Consensus 333 ~~~~~~~lF~~~~~-~~l~----~~~~l~t--~~ls~i~~d~~-~~~~-~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~ 403 (498)
...+ +.... ..| ..|. ..+.+++ ..+..+..+.. .++. ....+++. ++..+..|..++
T Consensus 172 ~~~d-g~~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gD~~a~~il 238 (347)
T 2ch5_A 172 DSID-NLEAA-PHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEG-----------AQQGDPLSRYIF 238 (347)
T ss_dssp HHHH-TSSCC-SSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHH-----------HHTTCHHHHHHH
T ss_pred HHHh-CCCCC-CCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHH-----------HHcCCHHHHHHH
Confidence 2111 11000 000 0000 0000000 00000000000 0000 02233332 233457899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHh--CcC-CCccEEEEEcCChhHH
Q 010895 404 TRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL--GEE-VSETVVIEHSNDGSGI 480 (498)
Q Consensus 404 ~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~--~~~-~~~~i~l~~~~Dgs~i 480 (498)
+++++++|.+|+++++.++|... ...+...|.++|++.+..|.|.+.+++.+++.. +.. ....|.+....+++.+
T Consensus 239 ~~~~~~La~~i~~l~~~~~p~~~--~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~ 316 (347)
T 2ch5_A 239 RKAGEMLGRHIVAVLPEIDPVLF--QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSAL 316 (347)
T ss_dssp HHHHHHHHHHHHHHGGGSCGGGG--CSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHH
T ss_pred HHHHHHHHHHHHHHHHHhccccc--ccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHH
Confidence 99999999999999999998310 000124688999999999999999999998874 221 1124554444558999
Q ss_pred HHHHHHHH
Q 010895 481 GAALLAAS 488 (498)
Q Consensus 481 GAAi~Aa~ 488 (498)
|||.++.-
T Consensus 317 GAa~la~~ 324 (347)
T 2ch5_A 317 GGASLGAR 324 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988753
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.78 E-value=1e-17 Score=165.55 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=172.7
Q ss_pred CccceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 010895 91 GDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (498)
Q Consensus 91 G~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (498)
..+..++|+||+|||++|++++++.+. .+.... ..++.|.. .+.+++++.|.+.+++++++... .....
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~~-~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~-----~~~~~ 76 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGER-FRVPTPQP---ATPESVAEAVALVVAELSARPEA-----PAAGS 76 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTT--EEEEEE-EEEECCSS---CCHHHHHHHHHHHHHHHHTSTTC-----CCTTC
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCC--eEEEEE-EecCCCcc---CCHHHHHHHHHHHHHHHHHhccc-----cCccc
Confidence 344567999999999999999999632 244221 12333321 35788999999999998864321 01234
Q ss_pred eeeeEeeeeeeeccCCceEEEccCCccccC-CCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhccccc----CCC-
Q 010895 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIE-DTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKD- 244 (498)
Q Consensus 171 ~lGftFSfP~~q~~i~~g~Li~wtKgF~~~-~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~----~~~- 244 (498)
.+|++++.|++ +|++. ++- +.+ ++.+.|+.+.|++.+ ++| +.+.||+++..+++.+. +.+
T Consensus 77 ~igi~~pG~v~-----~g~v~-~~~--~l~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~ 142 (267)
T 1woq_A 77 PVGVTFPGIIQ-----HGVVH-SAA--NVDKSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKG 142 (267)
T ss_dssp CEEEEESSCEE-----TTEEC-CCT--TSCGGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCS
T ss_pred eEEEEccceEc-----CCEEE-eCC--CCCCCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCC
Confidence 69999999996 35543 332 332 466799999999999 888 58999999999999762 333
Q ss_pred cEEEEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHH
Q 010895 245 AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLG 324 (498)
Q Consensus 245 ~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLg 324 (498)
..+.+++|||++++++.+.+.+.+ ++.+||.++ | .++|.++|+..|-
T Consensus 143 ~~~~l~~GtGIG~giv~~G~l~~G-----gEiGh~~v~--------------------------~--~~lE~~~S~~~l~ 189 (267)
T 1woq_A 143 TVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID--------------------------G--HDAETKASAVARE 189 (267)
T ss_dssp EEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET--------------------------T--EEHHHHHSHHHHH
T ss_pred cEEEEEECcceEEEEEECCEEccC-----ceeeeEEec--------------------------C--ccHHHHhCHHHHh
Confidence 578999999999999998765543 355565553 1 2589888887542
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHH
Q 010895 325 EIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVAT 404 (498)
Q Consensus 325 Ei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~ 404 (498)
+ . . . ..+
T Consensus 190 ~-----------~----------------------------~--------------------~--------------~~~ 196 (267)
T 1woq_A 190 R-----------D----------------------------G--------------------L--------------SWD 196 (267)
T ss_dssp H-----------T----------------------------T--------------------C--------------CHH
T ss_pred h-----------c----------------------------c--------------------h--------------hHH
Confidence 1 0 0 0 134
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE-EcCChhHHHHH
Q 010895 405 RGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE-HSNDGSGIGAA 483 (498)
Q Consensus 405 RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~-~~~Dgs~iGAA 483 (498)
+++++++.+|+++++.++| + .|.++|++....+.|.+.++ . ...|.+- +.+|++.+|||
T Consensus 197 ~~~~~l~~~l~~l~~~ldP--------~--~IvlgG~i~~~~~~~~~~~~--------~--~~~i~~s~l~~~a~~~GAa 256 (267)
T 1woq_A 197 EYSVLLQRYFSHVEFLFSP--------E--LFIVGGGISKRADEYLPNLR--------L--RTPIVPAVLRNEAGIVGAA 256 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGGGGTGGGCC--------C--SSCEEECSCSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--------C--EEEEeChhhcccHHHHHhhc--------c--CceEEECCcCCcHHHHHHH
Confidence 5778889999999999998 3 57899999988887766554 1 1233332 46889999999
Q ss_pred HHHHHhc
Q 010895 484 LLAASHS 490 (498)
Q Consensus 484 i~Aa~~~ 490 (498)
.++....
T Consensus 257 ~l~~~~~ 263 (267)
T 1woq_A 257 IEIALQH 263 (267)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 8875444
No 28
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.73 E-value=7.9e-18 Score=168.63 Aligned_cols=277 Identities=14% Similarity=0.127 Sum_probs=170.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
++|+||+|||++|+++++++|+ ++.+. .++.|. ....+.+++++.|.+.+.+++++. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 5899999999999999998775 55332 233322 111357889999999999887532 2468888
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCc
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGt 255 (498)
++.| +.. ++. .++.+.|++ + ++| +.+.||+++.++++.+ .+..+.+++|||.
T Consensus 67 ~~G~-~~~---~~~---------------~~l~~~l~~-~---~~p---v~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSK---FDW---------------ENFTPLASL-I---APK---VIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSH---HHH---------------HHHHHHHTT-S---SSE---EEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cch---hHH---------------HHHHHHHHh-C---CCC---EEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 8888 532 121 345555555 4 556 5899999999999875 4678999999994
Q ss_pred eeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCc----ceeeeccccccHHHHHHHHH
Q 010895 256 NAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGE----QIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 256 Na~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~----q~fEkm~SG~YLgEi~R~il 331 (498)
++ ... +.+.++.+++.|||.++ +...| .|++.|. +|+|.++|+..|-+.++..+
T Consensus 119 ---i~-~g~-~~G~~~~aGE~Gh~~~~-~g~~c----------------~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~ 176 (299)
T 2e2o_A 119 ---VV-EGY-NGKEFLRVGGRGWLLSD-DGSAY----------------WVGRKALRKVLKMMDGLENKTILYNKVLKTI 176 (299)
T ss_dssp ---EE-EEE-CSSCEEEEECSCTTTCC-TTSHH----------------HHHHHHHHHHHHHHTTSSCCCHHHHHHHHHT
T ss_pred ---EE-EEE-cCCeEEecCCcCCCcCC-CccHH----------------HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHh
Confidence 22 122 22222222333444333 11111 1222111 18999999999877655321
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhcccc-CCC-CCh-HHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHH-DTS-PDL-RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGAR 408 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~-d~~-~~~-~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 408 (498)
+...+..+ +..+.. +.. .++ .....+++. ++..+..|..+++++++
T Consensus 177 ----------~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gd~~a~~il~~~~~ 225 (299)
T 2e2o_A 177 ----------NVKDLDEL----------VMWSYTSSCQIDLVASIAKAVDEA-----------ANEGDTVAMDILKQGAE 225 (299)
T ss_dssp ----------TCCSHHHH----------HHHHHHHTTCHHHHHTTHHHHHHH-----------HHTTCHHHHHHHHHHHH
T ss_pred ----------CCCCHHHH----------HHHHHcCCCCHHHHHHHHHHHHHH-----------HhcCCHHHHHHHHHHHH
Confidence 00000000 000000 000 000 012223322 23345789999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHH
Q 010895 409 LSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 487 (498)
Q Consensus 409 l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa 487 (498)
++|.+++++++.++| + .|.++|++... +.|.+.+++.+++. .|..-..++.+.+|||.++.
T Consensus 226 ~La~~i~~l~~~l~p--------~--~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 226 LLASQAVYLARKIGT--------N--KVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKRSPEIGAVILAY 286 (299)
T ss_dssp HHHHHHHHHHHHHTC--------S--EEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--------C--EEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCCChHHHHHHHHH
Confidence 999999999999988 3 47789999988 99999999888764 23222245889999998774
No 29
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.67 E-value=7.7e-17 Score=167.68 Aligned_cols=292 Identities=14% Similarity=0.122 Sum_probs=183.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHH---HHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~I---a~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
++|+||+|||++|+++++++ +++.+. .++.+.... .+.+++++.+ .+.|.+++++.+.. ..+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~----~~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYS----LSSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCC----GGGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCC----ccCceEE
Confidence 58999999999999999863 255332 233322100 0223445555 78888888765431 1234556
Q ss_pred eeEeeeeeeeccCCceEEE-----------ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechH---------
Q 010895 173 GFTFSFPVRQTSIASGDLI-----------KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI--------- 232 (498)
Q Consensus 173 GftFSfP~~q~~i~~g~Li-----------~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTv--------- 232 (498)
+.+++|++. .+|.+. .+.+-...+.. +.++.+.|++.+ ++|+ .+.||++
T Consensus 72 -i~~pG~vd~---~~G~~~~i~~~~~~~l~~~~~~~~~~nl-~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 72 -VSRGGLLDP---IPGGVYLVDGLMIKTLKSGKNGEHASNL-GAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp -EEECCSCSC---BCSSEEECCHHHHHHHHHTTTCCCTTHH-HHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGT
T ss_pred -EecCCCCCC---CCCceEecCHHHHHHHHhcccccChhhh-hHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHH
Confidence 677788863 234331 01110011111 456777777777 8995 6999999
Q ss_pred HHHh-----------------cc-cc----cCCC--cEEEEEEccCceeeEEcccCccccccCCCCCCCcEEEeccCCCc
Q 010895 233 GTLA-----------------GG-RY----HNKD--AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF 288 (498)
Q Consensus 233 atll-----------------a~-ay----~~~~--~~iglIlGTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f 288 (498)
++.+ ++ .+ ++.+ ..+.+.+|||+++|.+.+.+.+.+..+.+++ |||.++.. |.|
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~~~-g~c 218 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPERS-GTL 218 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSSCC-CSC
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeeccC-CCC
Confidence 7777 76 33 2345 8999999999999999998888776665567 88877532 223
Q ss_pred CCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHHHHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCC
Q 010895 289 RSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTS 368 (498)
Q Consensus 289 ~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~ 368 (498)
+ |.+--..|+|..+|+..|-+.++.. ..+ .. ... .
T Consensus 219 ~----------------cg~l~~gc~e~~~S~~~l~~~~~~~----------------------~g~----~~-~~~--~ 253 (381)
T 1saz_A 219 P----------------LTQLVDLCFSGKFTYEEMKKRIVGN----------------------GGL----VA-YLG--T 253 (381)
T ss_dssp C----------------HHHHHHHHTSSCCCTTGGGSTTTTS----------------------CTH----HH-HHS--C
T ss_pred C----------------CcHHHHHHHHhCCCHHHHHHHHHhc----------------------cCc----cc-ccc--C
Confidence 2 2220035889999987774322110 000 00 000 0
Q ss_pred CChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCCCceEEEEEeceEeccc
Q 010895 369 PDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL--GRDTVRDGEKQKSVIALDGGLFEHY 446 (498)
Q Consensus 369 ~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~--~~~~~~~~~~~~~~I~idGsv~~~~ 446 (498)
.+ .+.+++. ++..+..|..+++++++.+|.+|++++..+ +| + .|.++|++.+..
T Consensus 254 ~~---~~~i~~~-----------a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p--------~--~IvlgGgi~~~~ 309 (381)
T 1saz_A 254 SD---AREVVRR-----------IKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEV--------D--FIVLTGGLAHEK 309 (381)
T ss_dssp CC---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------S--EEEEEEGGGGCT
T ss_pred CC---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------C--EEEEeCcCccCh
Confidence 11 2233332 122236788899999999999999999999 66 3 588999999987
Q ss_pred HhHHHHHHHHHHHHhCcCCCccEEEEEcC---ChhHHHHHHHH
Q 010895 447 TKFSACMQSTVKELLGEEVSETVVIEHSN---DGSGIGAALLA 486 (498)
Q Consensus 447 p~f~~~l~~~l~~l~~~~~~~~i~l~~~~---Dgs~iGAAi~A 486 (498)
+.|++.+++.++.+. .+.+..++ |+..+|||.++
T Consensus 310 ~~l~~~i~~~l~~~~------~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 310 EFLVPWITKRVSFIA------PVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp TTHHHHHHHHHTTTS------CEEEEEBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc------CeEEEecCcchhHHHHHHHHHH
Confidence 779999999887652 35666554 46788998765
No 30
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.59 E-value=2.4e-15 Score=145.62 Aligned_cols=203 Identities=19% Similarity=0.218 Sum_probs=139.3
Q ss_pred cceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
+.+++|++|+|||++|+ ++.+++ +. .+.+.|. ..+.+++.+.|++. +++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~~----~~~~t~~---~~~~~~~~~~i~~~----i~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---EE----RKVESGK---TMTGPEMVAAVTAM----AKDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---CE----EEEECCT---TCCHHHHHHHHHHH----TTTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---EE----EEEECCC---CCCHHHHHHHHHHH----HHhC---------CCCEE
Confidence 45689999999999993 666553 32 1233332 13456666666554 3322 24679
Q ss_pred eeEeeeeeeeccCCceEEEccCCcccc-CCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEE
Q 010895 173 GFTFSFPVRQTSIASGDLIKWTKGFSI-EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251 (498)
Q Consensus 173 GftFSfP~~q~~i~~g~Li~wtKgF~~-~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIl 251 (498)
|++++.|++. ++.+ .++- ++ +++.+.|+. +.+ ++| +.+.||+.+..+++.+. ...+.+.+
T Consensus 59 gi~~pG~Vd~----~~~~-~~~~--nl~~~w~~~~l~----~~~---~~p---v~v~NDanaaalge~~~--~~~~~l~~ 119 (226)
T 3lm2_A 59 AMGYPGPVVH----NKPL-REPV--NLGEGWVGYDYE----GAF---GRP---VRIVNDALMQAIGSYNG--GRMLFLGL 119 (226)
T ss_dssp EEEESSCEET----TEEC-SCCT--TSCSCCTTCCHH----HHH---TSC---EEEEEHHHHHHHHHCCS--SEEEEEEE
T ss_pred EEEEEeEEEC----CeEE-EECC--cCCccccCCchH----Hhc---CCe---EEEEEHHHHHHHHHhhc--CcEEEEEe
Confidence 9999999974 2222 2221 33 356677764 445 888 58999999999999765 68999999
Q ss_pred ccCceeeEEcccCccccccCCCCCCCcEEEeccCCCcCCCCCCCccccccccccCCCCCcceeeeccccccHHHHHHHHH
Q 010895 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 331 (498)
Q Consensus 252 GTGtNa~yie~~~~i~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~~D~~s~nPG~q~fEkm~SG~YLgEi~R~il 331 (498)
|||.+++++.+.+.++ +|.+||.++. + .|+|.++|+..|-+.
T Consensus 120 GtGiG~gii~~G~l~~------GEiGH~~v~~--------------------------~-gclE~~~s~~al~~~----- 161 (226)
T 3lm2_A 120 GTGLGAAMIVENVAQP------MEIAHLPYRK--------------------------G-KTYEHYVSEAYREKK----- 161 (226)
T ss_dssp SSSEEEEEEETTEEEE------ECCTTSEEET--------------------------T-EEHHHHTCHHHHHHH-----
T ss_pred CCceEEEEEECCEEee------eeeeeEEecC--------------------------C-CcHHHHhCHHHHHHH-----
Confidence 9999999998765432 2444444431 1 599999999876430
Q ss_pred HHHHhccCCCCCCCCCCcCCCCccCchhhhccccCCCCChHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010895 332 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 411 (498)
Q Consensus 332 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~A 411 (498)
. -++++++++
T Consensus 162 ---------------------~-------------------------------------------------~~~~~~~L~ 171 (226)
T 3lm2_A 162 ---------------------G-------------------------------------------------NAKWQKRVQ 171 (226)
T ss_dssp ---------------------C-------------------------------------------------HHHHHHHHH
T ss_pred ---------------------H-------------------------------------------------HHHHHHHHH
Confidence 0 035678899
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHH
Q 010895 412 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTV 457 (498)
Q Consensus 412 a~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l 457 (498)
.+|+++++.++| + .|.++|++.+..+.|.+.+++.+
T Consensus 172 ~~la~l~~~~dP--------~--~IVlGG~~~~~~~~~~~~i~~~~ 207 (226)
T 3lm2_A 172 DVVERLSAALEP--------D--EVVIGGGNVERLENLPPKCRRGD 207 (226)
T ss_dssp HHHHHHHHHHCC--------S--EEEEESGGGGGCCCCCTTEEECC
T ss_pred HHHHHHHHHHCC--------C--EEEEeChhhhhhhHHHHHHHHHH
Confidence 999999999998 3 57899999998887766555443
No 31
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.54 E-value=7.4e-14 Score=139.62 Aligned_cols=124 Identities=15% Similarity=0.114 Sum_probs=83.8
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec-CCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i-p~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
+|+||+|||++|+++++ +|+ ++.+ ... |.+....+.+++++.|.+.+.+.+... ..+...+|+.
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~i~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGR----FQTSGINPFQQDRNEIDTALRSEVLPAIGQK-------ASSIRAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEE----EEEECCCTTTSCHHHHHHHHTTTTHHHHTTS-------TTTCCEEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEE----EECCCCCcccCCHHHHHHHHHHHHHHHhCCC-------cccccEEEEE
Confidence 79999999999999999 764 5533 223 222222256788888888887765211 1234567888
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEccCc
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGTGt 255 (498)
.+.|. . ..+ .++.+.|++.+ +.. ..+.|.||++++++++. +.+..+.+|+|||+
T Consensus 67 ~pG~~-~---~~~----------------~~l~~~l~~~~---~~~-~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 67 GAGCT-P---AKA----------------PMLNEALDSML---PHC-DRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp ETTCC-T---TTH----------------HHHHHHHHHHS---TTC-SEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred CCCCC-h---HHH----------------HHHHHHHHHhc---CCC-CcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 87775 1 111 25666666665 530 12689999999999974 55778999999999
Q ss_pred eeeEEc
Q 010895 256 NAAYVE 261 (498)
Q Consensus 256 Na~yie 261 (498)
+++.+.
T Consensus 121 gg~~i~ 126 (291)
T 1zbs_A 121 NSCLFD 126 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 865553
No 32
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.52 E-value=1.5e-13 Score=138.17 Aligned_cols=126 Identities=18% Similarity=0.145 Sum_probs=86.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCc--ceee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ--RELG 173 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~--~~lG 173 (498)
++|+||+|||++|+++++++|+ ++.+. ... |.... .+.+++++.+++.|.+++++.+.. ..+. ..+|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~----~~~i~~~~ig 80 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASALS-QGIAKSWQAVLSTLEAAFQQAGLP----AAPASACAIG 80 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCGG-GCHHHHHHHHHHHHHHHHHHTTCC----CCCGGGEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCcc-cCHHHHHHHHHHHHHHHHHhcCCC----hhhhccceEE
Confidence 7899999999999999998775 55332 111 22222 357889999999999999876532 1222 4688
Q ss_pred eEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccCCCcEEEEEEcc
Q 010895 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (498)
Q Consensus 174 ftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~~~~~iglIlGT 253 (498)
+.++.|++... |. .|++.+.+ ++| +.|.||+++.++++. . .+..+.+++||
T Consensus 81 ig~pG~v~~~~--------~~---------------~l~~~~~~-~~p---v~v~NDa~aaa~ge~-~-~~~~v~v~~GT 131 (305)
T 1zc6_A 81 LGLSGVHNRQW--------AG---------------EFESQAPG-FAR---LSLATDGYTTLLGAH-G-GQPGIIVALGT 131 (305)
T ss_dssp EEESCCCTTSH--------HH---------------HHHHTCCC-CSE---EEEECHHHHHHHHHT-T-TSSEEEEEESS
T ss_pred EEecCCCchHH--------HH---------------HHHHhCCC-Cce---EEEECCHHHHHHhhc-C-CCCeEEEEecC
Confidence 88888886422 32 03332211 345 689999999999873 3 46678899999
Q ss_pred CceeeEEc
Q 010895 254 GTNAAYVE 261 (498)
Q Consensus 254 GtNa~yie 261 (498)
|++++.+.
T Consensus 132 Gigg~~i~ 139 (305)
T 1zc6_A 132 GSIGEALY 139 (305)
T ss_dssp SEEEEEEC
T ss_pred CeEEEEEe
Confidence 99655554
No 33
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.52 E-value=2.4e-14 Score=143.20 Aligned_cols=121 Identities=19% Similarity=0.160 Sum_probs=73.2
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCC-CccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeE
Q 010895 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (498)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGft 175 (498)
+|+||+|||++|+++++ +|+ ++.+. ..|. +....+.+++++.|.+.+.+.+... +...+|+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~~----~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~---------~i~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKRL----GTKGINPFFQSEEEIQQKLTASLLPQLPEG---------KFNAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEEE----EECCCCTTTSCSTTTTTTTTC----------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEEE----ECCCCCcccCCHHHHHHHHHHHHHHhcCcc---------cccEEEEE
Confidence 78999999999999998 775 55332 2332 2211245567777777776654221 23457777
Q ss_pred eeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcC--CCeeEEEEEechHHHHhcccccCCCcEEEEEEcc
Q 010895 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG--LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (498)
Q Consensus 176 FSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~--l~v~vvaivNDTvatlla~ay~~~~~~iglIlGT 253 (498)
.+.+. .. . +.++.+.|++.+ + .| +.|.||++++++++. +.+..+.+|+||
T Consensus 65 ~pG~~-~~---~----------------~~~l~~~l~~~~---~~~~p---v~v~NDa~~aalge~--g~~~~v~v~~GT 116 (291)
T 1zxo_A 65 GAGCT-PE---K----------------APVLRRAIADSL---PVIGN---IKANSDMLAAAHGLC--GQKAGIACILGT 116 (291)
T ss_dssp CTTCC-TT---T----------------THHHHHHHHHHS---CCCSC---CEEECSHHHHHHHTT--TTSCBEEEEESS
T ss_pred cCCCC-HH---H----------------HHHHHHHHHHhc---CCCce---EEEECcHHHHHHhhc--CCCCcEEEEeCC
Confidence 77765 21 1 125666776665 6 36 589999999999985 556789999999
Q ss_pred Cce-eeEEcc
Q 010895 254 GTN-AAYVER 262 (498)
Q Consensus 254 GtN-a~yie~ 262 (498)
|++ ++++.+
T Consensus 117 Gi~g~gi~~~ 126 (291)
T 1zxo_A 117 GSNSCFYNGK 126 (291)
T ss_dssp SEEEEEECSS
T ss_pred ChheEEECCC
Confidence 997 555543
No 34
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.36 E-value=0.00039 Score=74.45 Aligned_cols=97 Identities=21% Similarity=0.226 Sum_probs=61.8
Q ss_pred ccceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--C-CCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 010895 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (498)
Q Consensus 92 ~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~ 168 (498)
....++|+||+|+|++|+++++.+|+ ++...+..++. | ......+++++++.+.+++++.+++.+.. ..+
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~----~~~ 76 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGES----DWR 76 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGG----GCC
T ss_pred ccCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCC----hhh
Confidence 34558999999999999999998774 55544333322 1 11122468899999999999999876532 234
Q ss_pred cceeeeEeee----eeeeccCCceEEEccCC
Q 010895 169 QRELGFTFSF----PVRQTSIASGDLIKWTK 195 (498)
Q Consensus 169 ~~~lGftFSf----P~~q~~i~~g~Li~wtK 195 (498)
...+|++-.. |++..+-.-...+.|..
T Consensus 77 I~~Igis~~~~~~v~~D~~G~~l~~~i~W~D 107 (508)
T 3ifr_A 77 PGGICVTGMLPAVVLLDDRGAVLRPSIQQSD 107 (508)
T ss_dssp EEEEEEEECSSCBEEECTTSCBCSCEECTTC
T ss_pred eEEEEEECCCCcEEEECCCCCCcccceeccc
Confidence 5667777766 77654421122345764
No 35
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.09 E-value=0.0016 Score=69.80 Aligned_cols=96 Identities=18% Similarity=0.225 Sum_probs=60.7
Q ss_pred cceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 010895 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (498)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (498)
|+.++|+||+|+|++|+++++.+|+ ++...+..++. |.. ....+++++++.+.+++++.+++.+.. ..+.
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~----~~~I 73 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADIS----SDQI 73 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCC----GGGE
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC----hhhe
Confidence 5568999999999999999998775 55443333321 211 122468899999999999999876532 1234
Q ss_pred ceeeeEeee----eeeec-cCCceEEEccCC
Q 010895 170 RELGFTFSF----PVRQT-SIASGDLIKWTK 195 (498)
Q Consensus 170 ~~lGftFSf----P~~q~-~i~~g~Li~wtK 195 (498)
..+|++... |++.. +..-...+.|..
T Consensus 74 ~~Igis~~~~~~v~~D~~~G~~l~~~i~W~D 104 (510)
T 2p3r_A 74 AAIGITNQRETTIVWEKETGKPIYNAIVWQC 104 (510)
T ss_dssp EEEEEEECSSCBEEEETTTCCBSSCEECTTC
T ss_pred EEEEEeCCcCcEEEEECCCCeECcccccccC
Confidence 455555542 56653 422222345763
No 36
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=97.03 E-value=0.0017 Score=69.61 Aligned_cols=94 Identities=16% Similarity=0.270 Sum_probs=60.8
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeee--cCCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcce
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (498)
.++|+||+|+|++|+++++.+|+ ++...+..++ .|+. ....+++++++.+.++|++.+++.+.. ..+...
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~----~~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGIT----ANDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCC----GGGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC----cccEEE
Confidence 37999999999999999998775 5544333332 1211 123468899999999999999875432 234556
Q ss_pred eeeEeee----eee-eccCCceEEEccCC
Q 010895 172 LGFTFSF----PVR-QTSIASGDLIKWTK 195 (498)
Q Consensus 172 lGftFSf----P~~-q~~i~~g~Li~wtK 195 (498)
+|++... |++ .++..-...+.|..
T Consensus 99 Igis~~g~~~v~~D~~~G~~l~~~i~W~D 127 (520)
T 4e1j_A 99 IGITNQRETVVVWDRETGKPIHNAIVWQD 127 (520)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEEeCCcceEEEEECCCCeECcccccccc
Confidence 6666655 676 45522222345763
No 37
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.91 E-value=0.0036 Score=66.90 Aligned_cols=95 Identities=19% Similarity=0.308 Sum_probs=59.4
Q ss_pred ceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CC-CccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 010895 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (498)
+.++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+++++++.+.++|++.+++.+.. ..+..
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~----~~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIR----PEAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCC----GGGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC----hhheE
Confidence 347999999999999999998775 55443333321 21 1123468899999999999999876532 12344
Q ss_pred eeeeEee----eeeeec-cCCceEEEccCC
Q 010895 171 ELGFTFS----FPVRQT-SIASGDLIKWTK 195 (498)
Q Consensus 171 ~lGftFS----fP~~q~-~i~~g~Li~wtK 195 (498)
.+|++-. .|++.. +..-...+.|..
T Consensus 77 ~Igis~~~~~~v~~D~~~G~~l~~~i~w~D 106 (506)
T 3h3n_X 77 GIGITNQRETTVVWDKTTGQPIANAIVWQS 106 (506)
T ss_dssp EEEEEECSSCBEEEETTTCCBSSCEECTTC
T ss_pred EEEeeCCcccEEEEeCCCCeECCCceEecC
Confidence 4555432 256643 422223346764
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.90 E-value=0.0029 Score=67.47 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=58.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
++|+||+|+|++|+++++.+|+ ++...+..++. |.. ....+++++++.+.+++++.+++.+.. ..+...+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~----~~~I~~I 79 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVR----ADQIAGI 79 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCC----GGGEEEE
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC----cccEEEE
Confidence 7999999999999999998775 55444333321 111 122468899999999999999876532 1234455
Q ss_pred eeEee----eeeeec-cCCceEEEccCC
Q 010895 173 GFTFS----FPVRQT-SIASGDLIKWTK 195 (498)
Q Consensus 173 GftFS----fP~~q~-~i~~g~Li~wtK 195 (498)
|++-. .|++.. +..-...+.|..
T Consensus 80 gis~~~~~~v~~D~~~G~~l~~~i~w~D 107 (501)
T 3g25_A 80 GITNQRETTVVWDKHTGRPIYHAIVWQS 107 (501)
T ss_dssp EEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEECCcCcEEEEECCCCeECCCceeecc
Confidence 55543 466654 422223345763
No 39
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.87 E-value=0.0033 Score=66.93 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=54.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
++|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|++.+++.+.. ..+...+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~----~~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAE----AGEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCC----GGGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCC----cccEEEE
Confidence 6899999999999999998765 55443322321 211 122367899999999999998875432 1235567
Q ss_pred eeEee----eeeeec
Q 010895 173 GFTFS----FPVRQT 183 (498)
Q Consensus 173 GftFS----fP~~q~ 183 (498)
|++.. .|++..
T Consensus 76 gis~~~~~~~~vD~~ 90 (495)
T 2dpn_A 76 GITNQRETTLLWDRK 90 (495)
T ss_dssp EEEECSSCBEEEETT
T ss_pred EEeCCCccEEEEECC
Confidence 77766 477653
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.79 E-value=0.0047 Score=65.84 Aligned_cols=81 Identities=7% Similarity=-0.019 Sum_probs=54.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhc--CCCCCCCCCCcc
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATE--GEGFHVSPGRQR 170 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~--~~~~~~~~~~~~ 170 (498)
++|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.++|++.+++. +.. ..+..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~----~~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT----SVIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS----SCEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC----ccceE
Confidence 6899999999999999998775 55443333321 111 112367899999999999998764 321 12355
Q ss_pred eeeeEee----eeeeec
Q 010895 171 ELGFTFS----FPVRQT 183 (498)
Q Consensus 171 ~lGftFS----fP~~q~ 183 (498)
.+|++.. .|++..
T Consensus 78 ~Igis~~~~~~~~~D~~ 94 (503)
T 2w40_A 78 CIGITNQRETVIIWDRI 94 (503)
T ss_dssp EEEEEECSSCEEEEETT
T ss_pred EEEEcCCcceEEEEECC
Confidence 6777666 477653
No 41
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.76 E-value=0.0032 Score=67.56 Aligned_cols=77 Identities=19% Similarity=0.284 Sum_probs=53.3
Q ss_pred ccceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CC-CccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 010895 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (498)
Q Consensus 92 ~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~ 168 (498)
+|+-++||||+|.|+.|+++++.+|+ ++...+..++. |. ....-+++++++-+.++|++.+++.+.. ..+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~----~~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADIS----SDQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCC----GGG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC----hhh
Confidence 47889999999999999999988775 55444333332 21 1122368899999999999999887643 234
Q ss_pred cceeeeE
Q 010895 169 QRELGFT 175 (498)
Q Consensus 169 ~~~lGft 175 (498)
...||+|
T Consensus 74 I~aIgis 80 (526)
T 3ezw_A 74 IAAIGIT 80 (526)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5556665
No 42
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.71 E-value=0.0052 Score=65.18 Aligned_cols=90 Identities=16% Similarity=0.295 Sum_probs=58.0
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
.||+||+|||++|+++++.+|+ ++...+..+++ |+. ....+.+++++.+.+++++.+++... .+...+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~------~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCC------TTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCc------cceEEE
Confidence 3799999999999999988765 55443322221 111 12236789999999999998876421 235667
Q ss_pred eeEeee----eeeeccCCceEEEccC
Q 010895 173 GFTFSF----PVRQTSIASGDLIKWT 194 (498)
Q Consensus 173 GftFSf----P~~q~~i~~g~Li~wt 194 (498)
|++... +++..+..-...+.|.
T Consensus 72 gis~~~~~~v~~D~~G~~l~~~i~w~ 97 (484)
T 2itm_A 72 GIAGQMHGATLLDAQQRVLRPAILWN 97 (484)
T ss_dssp EEEECSSCBEEECTTCCBCSCEECTT
T ss_pred EEcCCcCcEEEECCCcCCCcccceec
Confidence 777766 7765442112233574
No 43
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.69 E-value=0.0048 Score=65.70 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=57.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
++|+||+|||++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.+++++.+++.+.. ..+...+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~----~~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIE----PNQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCC----GGGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC----cccEEEE
Confidence 6899999999999999988664 55443333321 111 112357899999999999999876532 1234456
Q ss_pred eeEeee----eeeeccCCceEEEccC
Q 010895 173 GFTFSF----PVRQTSIASGDLIKWT 194 (498)
Q Consensus 173 GftFSf----P~~q~~i~~g~Li~wt 194 (498)
|++... +++.++..-...+.|.
T Consensus 77 gis~~~~~~v~~D~~G~~l~~~i~w~ 102 (497)
T 2zf5_O 77 GVTNQRETTLVWDKDGKPLYNAIVWQ 102 (497)
T ss_dssp EEEECSSCEEEECTTCCBSSCEECTT
T ss_pred EEecCCCcEEEECCCCCCcccceeec
Confidence 665554 5555442112234575
No 44
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.68 E-value=0.0051 Score=65.60 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=54.4
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CCC-ccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
++|+||+|+|++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.+++++.+++.+.. ..+...+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~----~~~i~~I 75 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLT----HEDIAAV 75 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCC----GGGEEEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCC----cccEEEE
Confidence 6899999999999999998775 55443323321 111 112367899999999999998876432 1235566
Q ss_pred eeEeee----eeeec
Q 010895 173 GFTFSF----PVRQT 183 (498)
Q Consensus 173 GftFSf----P~~q~ 183 (498)
|++... |++..
T Consensus 76 gis~~g~~~v~vD~~ 90 (504)
T 2d4w_A 76 GITNQRETAVVWDKT 90 (504)
T ss_dssp EEEECSSCBEEEETT
T ss_pred EEeCCCCeEEEEECC
Confidence 666664 66643
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.44 E-value=0.0064 Score=65.65 Aligned_cols=63 Identities=24% Similarity=0.394 Sum_probs=45.9
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--C-CCccccChhHHHHHHHHHHHHHHHhcCC
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGE 160 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (498)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | ......+++++++.+.++|++.+++.+.
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~ 70 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADI 70 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCC
Confidence 47999999999999999998775 55443322221 1 1122346889999999999999987653
No 46
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.32 E-value=0.011 Score=63.22 Aligned_cols=93 Identities=11% Similarity=0.137 Sum_probs=57.4
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--CC-CccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcce
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (498)
.++|+||+|+|++|+++++.+|+ ++...+..+++ |. .....+++++++.+.+++++.+ +.+.. ..+...
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~----~~~I~~ 76 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVD----ARRVSA 76 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCC----GGGEEE
T ss_pred cEEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCC----hhHeEE
Confidence 37999999999999999998775 55444333321 11 1223468899999999999998 54322 123445
Q ss_pred eeeEee----eeeeeccCCceEEEccCC
Q 010895 172 LGFTFS----FPVRQTSIASGDLIKWTK 195 (498)
Q Consensus 172 lGftFS----fP~~q~~i~~g~Li~wtK 195 (498)
+|++-- .+++..+-.-...+.|..
T Consensus 77 Igis~q~~~~v~~D~~G~pl~~~i~W~D 104 (511)
T 3hz6_A 77 IVLSGQMQNFLPLDQDHEPLHRAVLYSD 104 (511)
T ss_dssp EEEEECCSCBEEECTTSCBSSCEECTTC
T ss_pred EEEecccccEEEECCCcCCCcCceecCC
Confidence 555542 255654422223345753
No 47
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.30 E-value=0.23 Score=47.97 Aligned_cols=35 Identities=6% Similarity=0.057 Sum_probs=24.4
Q ss_pred EEEechHHHHhcccccCCCcEEEEEEccCcee-eEE
Q 010895 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTGTNA-AYV 260 (498)
Q Consensus 226 aivNDTvatlla~ay~~~~~~iglIlGTGtNa-~yi 260 (498)
-.+|...|..++..+.++....-+.+|.|+.- .++
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~ 110 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKL 110 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEE
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEE
Confidence 56799999998888766666666666665544 444
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.17 E-value=0.021 Score=60.95 Aligned_cols=91 Identities=11% Similarity=0.221 Sum_probs=57.5
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec--C-CCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcce
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (498)
.++|+||+|+|++|+++++.+|+ ++...+..++. | ......+++++++.+.+++++.+++.+ .+...
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~-------~~I~~ 73 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-------GKIAA 73 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS-------SEEEE
T ss_pred CEEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC-------CCeEE
Confidence 47999999999999999998775 55544333321 1 111224688999999999999987643 12445
Q ss_pred eeeEee----eeeeeccCCceEEEccCC
Q 010895 172 LGFTFS----FPVRQTSIASGDLIKWTK 195 (498)
Q Consensus 172 lGftFS----fP~~q~~i~~g~Li~wtK 195 (498)
+|++-- .+++..+-.-...+.|..
T Consensus 74 Igis~q~~~~v~~D~~G~pl~~~i~W~D 101 (504)
T 3ll3_A 74 ISWSSQMHSLIGLGSDDELLTNSITWAD 101 (504)
T ss_dssp EEEEECSSCBEEECTTSCBSSCEECTTC
T ss_pred EEEECCCCcEEEECCCCCCcccceeCCc
Confidence 555542 255554422223446753
No 49
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.14 E-value=0.012 Score=63.92 Aligned_cols=83 Identities=13% Similarity=0.298 Sum_probs=53.5
Q ss_pred eeEEEEEeCCceEEEEEEEe-CCCcceeEEEeeeeee-------cC-------CCccccChhHHHHHHHHHHHHHHHhcC
Q 010895 95 GLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVS-------IP-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l-~g~~~~~~~~~~~~~~-------ip-------~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (498)
.++|+||+|+|++|+++++. +|+ ++...+..++ .| ......+++++++.+.++|++.+++.+
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred CEEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 47999999999999999998 775 6655443333 12 112223578899999999999998765
Q ss_pred CCCCCCCCCcceeeeEee----eeeeecc
Q 010895 160 EGFHVSPGRQRELGFTFS----FPVRQTS 184 (498)
Q Consensus 160 ~~~~~~~~~~~~lGftFS----fP~~q~~ 184 (498)
.. ..+...||++.- .+++..+
T Consensus 82 ~~----~~~I~~Igis~q~~~~v~~D~~G 106 (572)
T 3jvp_A 82 VD----ADDVIGIGVDFTACTMLPVDEEG 106 (572)
T ss_dssp -C----CSCEEEEEEEECSSCEEEECTTS
T ss_pred CC----hhHEEEEEEecCCCcEEEECCCC
Confidence 32 233455555542 2555444
No 50
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=96.10 E-value=0.11 Score=50.58 Aligned_cols=72 Identities=17% Similarity=0.307 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEE
Q 010895 392 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 471 (498)
Q Consensus 392 ~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l 471 (498)
..+++.+++.|..+- ..+++..+.. + .|.+.||+. ++|.+++.+.+.+.. .|.+
T Consensus 185 ~di~~av~e~Va~~i--------~~~~~~~~~~-------~--~i~~~GG~a-~n~~~~~~~~~~lg~--------~v~~ 238 (270)
T 1hux_A 185 IDIIAGIHRSVASRV--------IGLANRVGIV-------K--DVVMTGGVA-QNYGVRGALEEGLGV--------EIKT 238 (270)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHTTCCC-------S--SEEEESGGG-GCHHHHHHHHHHHCS--------CEEC
T ss_pred HHHHHHHHHHHHHHH--------HHHHhcCCCC-------C--eEEEeCccc-cCHHHHHHHHHHHCC--------CeEe
Confidence 455566666666653 2333333320 2 256778865 688898888877622 2332
Q ss_pred EE-cCChhHHHHHHHHHHh
Q 010895 472 EH-SNDGSGIGAALLAASH 489 (498)
Q Consensus 472 ~~-~~Dgs~iGAAi~Aa~~ 489 (498)
-. .+..+.+|||++|+..
T Consensus 239 p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 239 SPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp CGGGGGHHHHHHHHHHHHH
T ss_pred CCCcchHhHHHHHHHHHHh
Confidence 22 3446899999998653
No 51
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.18 E-value=0.038 Score=58.43 Aligned_cols=81 Identities=20% Similarity=0.094 Sum_probs=50.8
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEe-eee----eecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQE-FEE----VSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~-~~~----~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (498)
..+|+||+|+|++|+++++.+|+.-...... ... .+-|... ..+.+++++.+.+++++..... .+.
T Consensus 4 ~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~~~~~~~~~--------~~i 74 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYV-TWDVDSLESAIRLGLNKVCAAG--------IAI 74 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEE-ECCHHHHHHHHHHHHHHHHHTT--------CCC
T ss_pred ceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeE-EECHHHHHHHHHHHHHHHHhCC--------CCc
Confidence 3689999999999999999876521111110 000 1111111 2357789999999998876521 235
Q ss_pred ceeeeEe----eeeeeecc
Q 010895 170 RELGFTF----SFPVRQTS 184 (498)
Q Consensus 170 ~~lGftF----SfP~~q~~ 184 (498)
..+|++. ..|++..+
T Consensus 75 ~~Igis~q~~~~v~~D~~G 93 (489)
T 2uyt_A 75 DSIGIDTWGVDFVLLDQQG 93 (489)
T ss_dssp CEEEEEECSSCEEEECTTS
T ss_pred eEEEEecCcccEEEECCCC
Confidence 6788887 77776543
No 52
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=94.95 E-value=0.04 Score=58.47 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=40.0
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeec-C-CCccccChhHHHHHHHHHHHHHH
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFV 155 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~i-p-~~~~~~~~~~lfd~Ia~~I~~fl 155 (498)
.++|+||+|+|+.|+++++.+|+ ++...+..++. | ......+.+++++.+.+++++.+
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 37899999999999999986664 55444333321 1 11122468899999999999876
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=94.78 E-value=0.097 Score=50.63 Aligned_cols=48 Identities=17% Similarity=0.369 Sum_probs=32.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHH
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~ 152 (498)
-+|+||+|+||+++++++ +++ +.. .|++++... .+.+++..++.+.+.
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~---l~~----~~r~~T~~~-~t~de~~~~l~~l~~ 51 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGK---TFR----RWRLSTGVF-QTEDELFSHLHPLLG 51 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSS---SCE----EEEEECCTT-CCHHHHHHHHHHHHG
T ss_pred eEEEEEECCCeEEEEEEE-CCE---EEE----EEEecCCCC-CCHHHHHHHHHHHHh
Confidence 479999999999999996 222 332 366666543 467777777665443
No 54
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.46 E-value=0.092 Score=56.11 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=54.6
Q ss_pred ceeEEEEEeCCceEEEEEEE-eCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCccee
Q 010895 94 KGLFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~-l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (498)
..++|+||+|+|++|+++++ .+|+ ++...+ .+.|.... .+.+++++.+.+++++. +. ..+...+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~---i~~~~~--~~~~g~~e-~d~~~~~~~i~~~l~~~----~~-----~~~I~~I 68 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE---LVRFGQ--AKHPNGTS-VDPSYWWSAFQEAAEQA----GG-----LDDVSAL 68 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC---EEEEEE--EECCSSSE-ECTHHHHHHHHHHHHHT----TC-----STTEEEE
T ss_pred CcEEEEEEeccccEEEEEEECCCCe---EEEEEE--EeCCCCce-ECHHHHHHHHHHHHHhc----CC-----ccCceEE
Confidence 34799999999999999999 6665 554433 34454333 46788999888877652 21 1235566
Q ss_pred eeEeee----eeeeccCCceEEEccCC
Q 010895 173 GFTFSF----PVRQTSIASGDLIKWTK 195 (498)
Q Consensus 173 GftFSf----P~~q~~i~~g~Li~wtK 195 (498)
|++--. +++..+-.-...+.|..
T Consensus 69 gis~q~~~~v~~D~~G~pl~~~i~W~D 95 (515)
T 3i8b_A 69 AVGGQQHGMVILDNQGNVIRDAMLWND 95 (515)
T ss_dssp EEEECSSCBEEECTTSCBCSCEECTTC
T ss_pred EEeCCcceEEEECCCCCCcCCcceecC
Confidence 666543 66654422223456753
No 55
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.06 E-value=0.28 Score=47.96 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=34.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcC
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (498)
-+|+||+|+||+++++++- + ++.. .|++|+. . .+.+++. ..+.++++.++
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~---~l~~----~~r~~T~-~-~t~de~~----~~l~~ll~~~~ 52 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-D---EIKL----RFRHTSK-V-STSDELG----IFLKSVLRENN 52 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-T---EEEE----EEEEECS-C-CCHHHHH----HHHHHHHHTTT
T ss_pred eEEEEEECCCeEEEEEEEC-C---EEEE----EEEecCC-C-CCHHHHH----HHHHHHHHHcC
Confidence 4799999999999999963 2 2442 4778877 3 4666654 44555665554
No 56
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=90.76 E-value=3.6 Score=41.18 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc--cC--CCcEEEEEEccCc-eeeEEc
Q 010895 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HN--KDAIAAVILGTGT-NAAYVE 261 (498)
Q Consensus 206 dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay--~~--~~~~iglIlGTGt-Na~yie 261 (498)
+.++.+.+++++.|+++ ..++|...|+..+..+ .+ ....+=+=+|-|| ..+.+.
T Consensus 151 ~~v~~~~~~~~~aGl~~--~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~ 209 (377)
T 2ych_A 151 EAVAGVLEALRGAGLVP--VVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR 209 (377)
T ss_dssp HHHHHHHHHHHHTTCEE--EEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCce--EEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE
Confidence 45678888888888764 7899999998877532 21 2334445577777 455544
No 57
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=89.22 E-value=6.3 Score=37.31 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=21.3
Q ss_pred HHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 210 ELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 210 lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
.+++++++.|+++ ..++++..|.+++...
T Consensus 110 ~~~~~~~~~g~~~--~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAGLEL--VTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTTCEE--EEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcCCee--eecccHHHHHHHHHcC
Confidence 4666777667764 7889999999876543
No 58
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=88.15 E-value=1.1 Score=48.04 Aligned_cols=46 Identities=17% Similarity=0.233 Sum_probs=32.8
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|-++||.. +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.
T Consensus 438 i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 438 ILATGGAS-HNREILQVLADVF----D----APVYVIDTANSACVGSAYRAFHGL 483 (538)
T ss_dssp EEEEEGGG-GCHHHHHHHHHHH----T----SCEEECCCTTHHHHHHHHHHHHHH
T ss_pred EEEEcchh-cCHHHHHHHHHHh----C----CceEecCCCCchHHHHHHHHHHHh
Confidence 44555554 7888888777655 2 246554567899999999998765
No 59
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=86.91 E-value=1.1 Score=43.65 Aligned_cols=45 Identities=16% Similarity=0.185 Sum_probs=30.7
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHH
Q 010895 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAA 150 (498)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~ 150 (498)
+|+||+|+||+++++++ ++ ++.. .|++++... .+.+++..++.+.
T Consensus 2 lL~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~~-~t~de~~~~l~~l 46 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EG---ELRQ----HWRMETDRH-KTEDEYGMLVKQL 46 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TT---EEEE----EEEEECCTT-CCHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE-CC---EEEE----EEEecCCCc-CCHHHHHHHHHHH
Confidence 68999999999999997 22 2442 366766543 4566776665443
No 60
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=84.99 E-value=3.9 Score=41.54 Aligned_cols=89 Identities=18% Similarity=0.130 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccE--
Q 010895 392 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETV-- 469 (498)
Q Consensus 392 ~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i-- 469 (498)
+..+.++++-+++|...++-..|.. .+... ..... .|-++|+ ...|.+++.+++.+..- ..|
T Consensus 313 r~~~~~~~~~~~~~i~~~i~~~l~~----~~~~~---~~i~~-V~LvGG~--s~~p~v~~~l~~~f~~~------~~v~~ 376 (409)
T 4gni_A 313 RLRYETIARTVFEGFNRLVESAVKK----AGLDP---LDVDE-VIMSGGT--SNTPRIAANFRYIFPES------TRILA 376 (409)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHH----TTCCG---GGCCE-EEEESGG--GGCHHHHHHHHHHSCTT------SEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----cCCCH---HHCCE-EEEECCc--cccHHHHHHHHHHcCCc------ccccc
Confidence 3455567777777776666655542 22110 01122 3444444 36788888877765321 011
Q ss_pred -----EEEEcCChhHHHHHHHHHHhccccccc
Q 010895 470 -----VIEHSNDGSGIGAALLAASHSQYLEVE 496 (498)
Q Consensus 470 -----~l~~~~Dgs~iGAAi~Aa~~~~~~~~~ 496 (498)
.-.-.+..-..|||+.|+...++-..+
T Consensus 377 P~~~~~~~~p~~ava~GAa~~~~~~~~~~~~~ 408 (409)
T 4gni_A 377 PSTDPSALNPSELQARGAALQASLIQEHHHHH 408 (409)
T ss_dssp TTTCTTCCCTTTHHHHHHHHHHHHHHC-----
T ss_pred ccccCCCcCHHHHHHHHHHHHhhhhhhhhccC
Confidence 111246678899999999887765543
No 61
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=84.00 E-value=4.4 Score=40.64 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 207 v~~lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
-.+.+.++.++.|+++ +.++|+.+|++++...
T Consensus 168 ~r~~~~~a~~~aGl~~--~~li~Ep~Aaa~~~~~ 199 (394)
T 3qfu_A 168 QRQATKDAGTIAGLNV--LRIVNEPTAAAIAYGL 199 (394)
T ss_dssp HHHHHHHHHHHTTCEE--EEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCce--EEEecCHHHHHHHHhh
Confidence 3567778887778864 7899999999987643
No 62
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=83.22 E-value=4.5 Score=40.89 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 207 v~~lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
-.+.+.++.++.|++ ++.++|+.+|++++...
T Consensus 173 ~r~~~~~a~~~AGl~--~~~li~Ep~AAa~~~~~ 204 (404)
T 3i33_A 173 QRQATKDAGTITGLN--VLRIINEPTAAAIAYGL 204 (404)
T ss_dssp HHHHHHHHHHHHTCE--EEEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCC--eEEEeccHHHHHHHHHh
Confidence 356778888777885 48899999999987654
No 63
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=80.86 E-value=6.7 Score=41.55 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCC
Q 010895 397 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSND 476 (498)
Q Consensus 397 ~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~D 476 (498)
.+++++++=-|.-..-.+-++-...+.. .+ .|-++||.. +++.+.+.+.+.+ + ..|.+-...+
T Consensus 375 ~i~RAvlEgia~~~r~~le~l~~~~g~~------~~--~i~v~GGga-ks~~~~Qi~ADvl----g----~pV~~~~~~E 437 (526)
T 3ezw_A 375 HIIRATLESIAYQTRDVLEAMQADSGIR------LH--ALRVDGGAV-ANNFLMQFQSDIL----G----TRVERPEVRE 437 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC------CS--EEEEESGGG-GCHHHHHHHHHHH----T----SEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC------CC--EEEEECchh-hCHHHHHHHHHHH----C----CEEEeCCCCc
Confidence 3445555544443444444443344431 12 355677764 7888888776654 2 2566555788
Q ss_pred hhHHHHHHHHHHhc
Q 010895 477 GSGIGAALLAASHS 490 (498)
Q Consensus 477 gs~iGAAi~Aa~~~ 490 (498)
++.+|||++|+++.
T Consensus 438 ~~alGAA~lA~~a~ 451 (526)
T 3ezw_A 438 VTALGAAYLAGLAV 451 (526)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh
Confidence 99999999999877
No 64
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=70.24 E-value=18 Score=38.05 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=34.0
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|-++||.. +.+.+.+.+.+.+ + ..|.+....+++.+|||++|+++.
T Consensus 404 ~i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~ 450 (510)
T 2p3r_A 404 ALRVDGGAV-ANNFLMQFQSDIL----G----TRVERPEVREVTALGAAYLAGLAV 450 (510)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEEESCCCHHHHHHHHHHHHHH
T ss_pred EEEEeCchh-cCHHHHHHHHHHh----C----CceEecCCCCcHHHHHHHHHHHHh
Confidence 355667754 8888888777654 2 246555567899999999998765
No 65
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=70.08 E-value=16 Score=38.30 Aligned_cols=47 Identities=21% Similarity=0.281 Sum_probs=34.5
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|.++||.. +++.+.+.+.+.+ + ..|.+....+++.+|||++|+++.
T Consensus 407 ~i~~~GG~a-ks~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~la~~a~ 453 (501)
T 3g25_A 407 SLRVDGGAV-KNNFIMQFQADIV----N----TSVERPEIQETTALGAAFLAGLAV 453 (501)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEEESCCCHHHHHHHHHHHHHT
T ss_pred EEEEecchh-cCHHHHHHHHHHh----C----CceEecCCCcchHHHHHHHHHHHh
Confidence 355667754 8898888877754 2 256555577899999999999876
No 66
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=68.23 E-value=18 Score=39.05 Aligned_cols=83 Identities=16% Similarity=0.194 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEE
Q 010895 392 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 471 (498)
Q Consensus 392 ~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l 471 (498)
+..+.++++-+++|....+-..|. ..+... ..... .|-++||- ..|..++.+++.+ +.... ..
T Consensus 302 r~~~e~l~~~~~~~i~~~v~~~L~----~a~~~~---~~i~~-VvLvGG~s--riP~v~~~l~~~f----g~~~~--~~- 364 (605)
T 4b9q_A 302 RAKLESLVEDLVNRSIEPLKVALQ----DAGLSV---SDIDD-VILVGGQT--RMPMVQKKVAEFF----GKEPR--KD- 364 (605)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHH----HTTCCG---GGCSE-EEEESGGG--GSHHHHHHHHHHH----TSCCC--SS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HcCCCH---HHCcE-EEEeCCcc--CchHHHHHHHHHh----ccCcC--CC-
Confidence 455667777788877777665553 222210 01122 35555554 7888888887776 32111 11
Q ss_pred EEcCChhHHHHHHHHHHhcc
Q 010895 472 EHSNDGSGIGAALLAASHSQ 491 (498)
Q Consensus 472 ~~~~Dgs~iGAAi~Aa~~~~ 491 (498)
.-.+..-..|||+.|++.+.
T Consensus 365 ~nPdeaVA~GAai~a~~l~~ 384 (605)
T 4b9q_A 365 VNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp SCTTTHHHHHHHHHHHHHHT
T ss_pred cChhHHHHHhHHHHHHHhcC
Confidence 12356778999999987553
No 67
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=68.00 E-value=26 Score=36.75 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=23.6
Q ss_pred HHHHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 208 ~~lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
.+.+.++....|++ ++.++|..+|++++...
T Consensus 125 r~a~~~a~~~AGl~--~~~li~Ep~AAAlay~~ 155 (509)
T 2v7y_A 125 RQATKDAGRIAGLE--VERIINEPTAAALAYGL 155 (509)
T ss_dssp HHHHHHHHHHTTCE--EEEEEEHHHHHHHHTTG
T ss_pred HHHHHHHHHHcCCC--eEEEecCHHHHHHHHhh
Confidence 35667777777775 48899999999887654
No 68
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=67.98 E-value=68 Score=32.75 Aligned_cols=54 Identities=13% Similarity=0.036 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHcCCCeeEEEEEechHHHHhcccccC--CCcEEEEEEccCc-eeeEEc
Q 010895 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGT-NAAYVE 261 (498)
Q Consensus 206 dv~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~--~~~~iglIlGTGt-Na~yie 261 (498)
+.++-+.+++++.|+++ ..++|...|+.++....+ ....+-+=+|-|| +.+.+.
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~ 224 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYK 224 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEE
Confidence 36778889998888876 678999988876542211 1233334488887 555554
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=66.37 E-value=19 Score=37.78 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=33.9
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|-++||.. +.+.+.+.+.+.+ + ..|.+....+++.+|||++|+++.
T Consensus 406 ~i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~ 452 (506)
T 3h3n_X 406 LLKVDGGAA-KNDLLMQFQADIL----D----IDVQRAANLETTALGAAYLAGLAV 452 (506)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEECSSSCHHHHHHHHHHHHHT
T ss_pred EEEEecccc-cCHHHHHHHHHHh----C----CeEEecCCCcchhHHHHHHHHHHh
Confidence 355667754 7888888877754 2 245544467899999999998765
No 70
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=64.00 E-value=27 Score=36.61 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=34.4
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|.++||.. +++.+.+.+.+.+ + ..|......+++.+|||++|+++.
T Consensus 406 ~i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~ 452 (504)
T 2d4w_A 406 ELRVDGGMV-ANELLMQFQADQL----G----VDVVRPKVAETTALGAAYAAGIAV 452 (504)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHH
T ss_pred eEEEeCCcc-cCHHHHHHHHHHh----C----CeEEeCCCCcchHHHHHHHHHhhc
Confidence 355677765 7888888777755 2 246555567899999999998765
No 71
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.46 E-value=23 Score=37.77 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=36.9
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhcc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 491 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~~ 491 (498)
.|-++||..++.+.+.+.+.+.+ + ..|.+....+++.+|||++|+++.-
T Consensus 442 ~i~~~GGga~ks~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 442 ELYACGGLPQKNHLLMQIFADVT----N----REIKVAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp EEEEESSHHHHCHHHHHHHHHHH----T----SCEEEBCCSSHHHHHHHHHHHHHHC
T ss_pred EEEEEcCchhhCHHHHHHHHHHH----C----CeeEecCCCccHHHHHHHHHHHhcC
Confidence 47778887668888888887765 2 2465555678999999999987653
No 72
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=60.43 E-value=28 Score=36.43 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=34.1
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|.++||.. +++.+.+.+.+.+ + ..|.+....+++.+|||++|+.+.
T Consensus 411 i~~~GG~a-~s~~~~Q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~~~ 456 (503)
T 2w40_A 411 LRCDGGMT-KNKPFMQFNSDII----N----TKIEVSKYKEVTSLGAAVLAGLEV 456 (503)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHT
T ss_pred EEEeCccc-cCHHHHHHHHHHH----C----CeEEecCCCcchHHHHHHHHHHHh
Confidence 55677765 7888888877765 2 246555567899999999998876
No 73
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=59.18 E-value=36 Score=36.16 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=23.6
Q ss_pred HHHHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 208 ~~lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
.+.+.+|....|++ ++.++|+.+|+.++...
T Consensus 155 r~a~~~A~~~AGl~--~~~li~EP~AAAlay~~ 185 (554)
T 1yuw_A 155 RQATKDAGTIAGLN--VLRIINEPTAAAIAYGL 185 (554)
T ss_dssp HHHHHHHHHTTTCE--EEEEEEHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCC--eEEEeCcHHHHHHHHHh
Confidence 45667777767775 48999999999887554
No 74
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=58.91 E-value=37 Score=35.72 Aligned_cols=47 Identities=28% Similarity=0.167 Sum_probs=34.6
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|.++||.. ++|.+.+.+.+.+ + ..|......+++.+|||++|+++.
T Consensus 427 ~i~~~GGga-ks~~~~Qi~ADvl----g----~pV~~~~~~e~~alGAA~lA~~a~ 473 (515)
T 3i8b_A 427 RILLIGGGA-KSEAIRTLAPSIL----G----MDVTRPATDEYVAIGAARQAAWVL 473 (515)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SCEEEECCCCHHHHHHHHHHHHHH
T ss_pred EEEEECchh-cCHHHHHHHHHHh----C----CceEecCCcccHHHHHHHHHHHHc
Confidence 356677754 7898888877754 2 256665577899999999998765
No 75
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=58.83 E-value=26 Score=36.92 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=33.8
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|.++||.. +.|.+.+.+.+.+ + ..|......+++.+|||++|+++.
T Consensus 429 i~~~GGga-ks~~~~Qi~ADvl----g----~pV~~~~~~e~~alGAA~lA~~a~ 474 (520)
T 4e1j_A 429 LRVDGGMV-ASDWTMQRLSDLL----D----APVDRPVILETTALGVAWLAGSRA 474 (520)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCCCHHHHHHHHHHHHHH
T ss_pred EEEeCccc-cCHHHHHHHHHHh----C----CeEEecCCCccHHHHHHHHHHHHc
Confidence 45566654 7899988877754 2 256555578899999999998765
No 76
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=58.16 E-value=28 Score=36.30 Aligned_cols=46 Identities=24% Similarity=0.416 Sum_probs=33.8
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|.++||.. +++.+.+.+.+.+ + ..|.+....+++.+|||++|+.+.
T Consensus 402 i~~~GG~a-~n~~~~q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 402 LKADGGMA-QNRLFLKIQADLL----G----VPVAVPEVTETTALGAALMAGVGA 447 (495)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHH
T ss_pred EEEecccc-cCHHHHHHHHHHh----C----CeeEecCCcccHHHHHHHHHHhhc
Confidence 55677765 7888888877765 2 246555567899999999998765
No 77
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=57.54 E-value=40 Score=36.22 Aligned_cols=51 Identities=22% Similarity=0.274 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCeeEEEEEechHHHHhcccccC---CCcEEEEEEccCc-eeeEE
Q 010895 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGT-NAAYV 260 (498)
Q Consensus 208 ~~lL~~al~~~~l~v~vvaivNDTvatlla~ay~~---~~~~iglIlGTGt-Na~yi 260 (498)
.+.+.+|....|++ ++.++|+.+|+.++..... +...+=+=+|-|| ..+.+
T Consensus 151 r~a~~~A~~~AGl~--v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 151 RQATKDAGRIAGLE--VKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp HHHHHHHHHTTTCE--EEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHcCCc--eEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEE
Confidence 45667777767775 4899999999998765432 2233333456666 34433
No 78
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=56.93 E-value=38 Score=35.49 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=34.4
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|.++||.. +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.
T Consensus 396 ~i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~ 442 (504)
T 3ll3_A 396 AINATGGFL-KSDFVRQLCANIF----N----VPIVTMKEQQSGTLAAMFLARQAL 442 (504)
T ss_dssp EEEEESGGG-CSHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHT
T ss_pred EEEEeCchh-cCHHHHHHHHHhh----C----CeEEecCCCCchhHHHHHHHHHHc
Confidence 355677754 7888888877754 2 256555567899999999998765
No 79
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=56.75 E-value=41 Score=33.07 Aligned_cols=62 Identities=21% Similarity=0.269 Sum_probs=40.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccc-cC-hhHHHHHHHHHHHHHHHh
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVAT 157 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~ 157 (498)
.+-+||+|-.++|..+.+..+...+++........+-+.+.. +. .++-.+...++++.|.+.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999865433444433223334444321 11 456778888888888654
No 80
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=52.10 E-value=15 Score=36.09 Aligned_cols=26 Identities=31% Similarity=0.515 Sum_probs=21.0
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEE
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQ 124 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~ 124 (498)
..+|++|=|.||||+-+++ +| +++.+
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g---~vl~~ 31 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GE---ECLES 31 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TT---EEEEE
T ss_pred ccEEEEEecchheeeeeec-CC---ceehh
Confidence 3699999999999999997 54 36654
No 81
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=51.28 E-value=37 Score=30.12 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=33.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCC
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (498)
++|+||-|-++.=.++++..|+....+. +...+.+ . .+..+=+..|.+.+.++++++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~--~G~i~t~-~---~~~~~Rl~~i~~~l~~~i~~~~P 60 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLG--SGCIRTK-V---DDLPSRLKLIYAGVTEIITQFQP 60 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEE--EEEEECC-C---SCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEE--eeEEECC-C---CCHHHHHHHHHHHHHHHHHHcCC
Confidence 4799999999999999998775333332 2223333 1 12222234445555555555543
No 82
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=51.10 E-value=36 Score=35.88 Aligned_cols=76 Identities=18% Similarity=0.098 Sum_probs=45.1
Q ss_pred eeecccccCCCCccceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccc-cC-hhHHHHHHHHHHHHHHHh
Q 010895 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVAT 157 (498)
Q Consensus 80 MlPs~v~~~PtG~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~ 157 (498)
|=|.+.. |.-...-.+-+||+|-.++|..+++..++...++........+-+.+.. +. .++-.+...+++..|.+.
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~ 79 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVL 79 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 4455533 2223334789999999999999998865433344332222344343321 11 456778888899888653
No 83
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=51.09 E-value=47 Score=35.20 Aligned_cols=47 Identities=13% Similarity=0.268 Sum_probs=34.6
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
.|.++||. -+.+.+.+.+.+.+ + ..|.+....+++.+|||++|+++.
T Consensus 445 ~i~~~GG~-aks~~~~Qi~ADv~----g----~pV~~~~~~e~~alGAA~lA~~a~ 491 (554)
T 3l0q_A 445 TMMASGGG-TKNPIFVQEHANAT----G----CAMLLPEESEAMLLGSAMMGTVAA 491 (554)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----C----CEEEEESCSCHHHHHHHHHHHHHT
T ss_pred EEEEeCcc-ccCHHHHHHHHHhh----C----CeEEecCCCcchHHHHHHHHHHHc
Confidence 35667775 47888888777754 2 256555578899999999999866
No 84
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=50.63 E-value=56 Score=36.35 Aligned_cols=48 Identities=23% Similarity=0.281 Sum_probs=32.3
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEE---EEcCChhH-HHHHHHHHH
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI---EHSNDGSG-IGAALLAAS 488 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l---~~~~Dgs~-iGAAi~Aa~ 488 (498)
+|++.|||+ .+..+++.+.+.+++. .-.+.+ .+.+||++ +|+|++|+.
T Consensus 696 ~VvLsGGVa-~N~~Lr~~L~~~l~~~-----g~~v~~p~~~p~~DgGialGQA~~a~~ 747 (761)
T 3vth_A 696 KVVLSGGSF-QNRYLLRRLIEKLSLS-----GFEVYSNSKVPCNDGGISLGQAVIANK 747 (761)
T ss_dssp EEEEESGGG-GSHHHHHHHHHHHHHT-----TCEEEECSSSCSSGGGHHHHHHHHHHH
T ss_pred EEEEECcHH-HHHHHHHHHHHHHHhC-----CCEEEecCCCCCCchHHHHHHHHHHHH
Confidence 689999997 6677888888776552 112322 23466665 999998864
No 85
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=48.58 E-value=21 Score=37.38 Aligned_cols=62 Identities=18% Similarity=0.173 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHH-HHHHhCcCCCccEEEEEcCChhHHHHHHHHHH
Q 010895 410 SAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQST-VKELLGEEVSETVVIEHSNDGSGIGAALLAAS 488 (498)
Q Consensus 410 ~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~-l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~ 488 (498)
+|-.+.-++..+... . .|.++||.. +.|.+.+.+-+. + + ..|......+++.+|||++|++
T Consensus 374 ia~~~r~~l~~~~~~-------~--~i~~~GG~a-~s~~w~Qi~ADv~~----g----~pV~~~~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 374 AALVADTALDLIGST-------G--RILVEGRFA-EADVFVRALASLRP----D----CAVYTANAHNDVSFGALRLIDP 435 (482)
T ss_dssp HHHHHHHHHHHTTCC-------S--EEEEESGGG-GCHHHHHHHHHHST----T----SEEEEESSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhcCC-------C--eEEEeCCcc-cCHHHHHHHhhhcC----C----CeEEEcCCCchHHHHHHHHhCc
Confidence 555666666776642 2 366677764 788888888775 4 2 3566666788999999999987
Q ss_pred h
Q 010895 489 H 489 (498)
Q Consensus 489 ~ 489 (498)
+
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 7
No 86
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=47.72 E-value=47 Score=32.61 Aligned_cols=62 Identities=11% Similarity=0.178 Sum_probs=38.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccc-cC-hhHHHHHHHHHHHHHHHh
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVAT 157 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~ 157 (498)
.+-+||+|-+++|+.+++..+.....+........+-+.+.. +. .++-.+...+++.+|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 689999999999999999864433333332222233333221 11 345667777888888653
No 87
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=47.69 E-value=42 Score=35.00 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=33.4
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|.++||.. +++.+.+.+.+.+ + ..|.+....+++.+|||++|+.+.
T Consensus 397 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~ 442 (497)
T 2zf5_O 397 LRVDGGAT-ANDFLMQFQADIL----N----RKVIRPVVKETTALGAAYLAGLAV 442 (497)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHT
T ss_pred EEEeCccc-cCHHHHHHHHhhc----C----CeEEEcCCCcchHHHHHHHHHHHh
Confidence 45566664 7888888777765 2 246555567799999999998876
No 88
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=47.03 E-value=53 Score=34.05 Aligned_cols=46 Identities=22% Similarity=0.270 Sum_probs=32.8
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCCh-hHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG-SGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dg-s~iGAAi~Aa~~~ 490 (498)
|-++||.. +++.+.+.+.+.+ + ..|......+. +.+|||++|+++.
T Consensus 390 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~~alGAA~lA~~~~ 436 (484)
T 2itm_A 390 VTLIGGGA-RSEYWRQMLADIS----G----QQLDYRTGGDVGPALGAARLAQIAA 436 (484)
T ss_dssp EEEESGGG-CCHHHHHHHHHHH----C----CCEEEESCTTSCHHHHHHHHHHHHH
T ss_pred EEEEeccc-cCHHHHHHHHHHh----C----CeEEeCCCCCcccHHHHHHHHHHHc
Confidence 55666664 7888888777764 2 25666556674 8999999998765
No 89
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=46.12 E-value=15 Score=36.68 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=32.6
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHH
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl 155 (498)
-.+|+||=|.||||+-+++-+|. ++.+ .+-+..++.....++-..+.+.+.++.
T Consensus 7 ~~~IavDWGTSnlRa~l~~~~g~---vl~~----~~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 7 GYYAAVDWGTSSFRLWIIGEDGA---VLAE----RRSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp -CEEEEEECSSCEEEEEECTTSC---EEEE----EEESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CCEEEEEecchheehheecCCCC---chhh----hcCCcchhhcCcccHHHHHHHHHHHhh
Confidence 36999999999999998866553 6643 233444443223334444555555543
No 90
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=44.24 E-value=65 Score=32.50 Aligned_cols=79 Identities=9% Similarity=0.010 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEE
Q 010895 392 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 471 (498)
Q Consensus 392 ~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l 471 (498)
.++.+-+..+|..|-+.++... | ++.+. + .|.+.||...++|.+.+.+.+++.-+-.. ..++.+
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~--A--~~~~i--------~--~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~ 342 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMC--A--LNENI--------D--RVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALF 342 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--H--HHHTC--------C--CEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--H--HHcCC--------C--eEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEE
Confidence 4456677888888866654321 1 22333 2 37789998899999999999988644211 123322
Q ss_pred -EEcCChhHHHHHHHH
Q 010895 472 -EHSNDGSGIGAALLA 486 (498)
Q Consensus 472 -~~~~Dgs~iGAAi~A 486 (498)
....-.+.+|||+.+
T Consensus 343 ~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 343 LEHEGYFGAVGALLEL 358 (360)
T ss_dssp ETTTTCHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHh
Confidence 234455667777654
No 91
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=44.18 E-value=77 Score=32.75 Aligned_cols=45 Identities=16% Similarity=0.179 Sum_probs=30.4
Q ss_pred EEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEEEcCChhHHHHHHHHHHhc
Q 010895 436 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 490 (498)
Q Consensus 436 I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~~~~Dgs~iGAAi~Aa~~~ 490 (498)
|-++||.. +.+.+.+.+.+.+ + ..|... ..+++.+|||++|+.+.
T Consensus 397 i~~~GGga-ks~~~~Qi~ADvl----g----~pV~~~-~~e~~alGaa~~A~~a~ 441 (489)
T 2uyt_A 397 LHIVGGGC-QNTLLNQLCADAC----G----IRVIAG-PVEASTLGNIGIQLMTL 441 (489)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SEEEEC-CTTHHHHHHHHHHHHHT
T ss_pred EEEeCChh-hhHHHHHHHHHHH----C----CeeecC-CccHhHHHHHHHHHHHc
Confidence 55667665 7888888777765 2 245432 36899999987776553
No 92
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=43.82 E-value=77 Score=27.31 Aligned_cols=22 Identities=27% Similarity=0.252 Sum_probs=18.1
Q ss_pred eeEEEEEeCCceEEEEEEEeCC
Q 010895 95 GLFYALDLGGTNFRVLRVQLGG 116 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g 116 (498)
|.+||||+|-..+=|++-+..+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTT
T ss_pred CeEEEEEeCCCEEEEEEEcCCC
Confidence 5799999999888888877654
No 93
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=42.26 E-value=1.3e+02 Score=29.11 Aligned_cols=69 Identities=10% Similarity=0.078 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE
Q 010895 393 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE 472 (498)
Q Consensus 393 ~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~ 472 (498)
++.+.++.+|.+|-+.++.-. .+..+- + .|.+.||...++|..++.+.++++.. ..++.
T Consensus 211 DIaasl~~sV~~~I~~la~~~----a~~~~i--------~--~Vvf~Gg~l~~n~~l~~~l~~~~~~~-------~~~~~ 269 (287)
T 2ews_A 211 NKLAAVIGVVGEVVTTMAITV----AREFKT--------E--NIVYIGSSFHNNALLRKVVEDYTVLR-------GCKPY 269 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHTTC--------C--EEEEESGGGTTCHHHHHHHHHHHHHT-------TCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhCCC--------C--eEEEeCCchhcCHHHHHHHHHHHhhC-------CceEE
Confidence 345577788877765543221 122332 2 48899997789999999999876542 23444
Q ss_pred EcCChhHHHH
Q 010895 473 HSNDGSGIGA 482 (498)
Q Consensus 473 ~~~Dgs~iGA 482 (498)
.-+++...||
T Consensus 270 ~p~~~~~~gA 279 (287)
T 2ews_A 270 YVENGAFSGA 279 (287)
T ss_dssp ECTTGGGHHH
T ss_pred ECCCccHHHH
Confidence 4556655444
No 94
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=37.70 E-value=53 Score=34.69 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=25.6
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeee
Q 010895 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEV 129 (498)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~ 129 (498)
.+||+||+|.|++|+++++.+|+ ++...+..+
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~---vv~~~~~~~ 41 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELN---VFYEESVHF 41 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEEEEEH
T ss_pred CEEEEEEEcCcCEEEEEECCCCC---EEEEEEEec
Confidence 38999999999999999998775 665554444
No 95
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=36.20 E-value=74 Score=31.64 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=39.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCc-ceeEEEeeeeeecCCCccc-cC-hhHHHHHHHHHHHHHHHhc
Q 010895 96 LFYALDLGGTNFRVLRVQLGGRE-GRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~-~~~~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~~ 158 (498)
.+-+||+|-.++|..+.+...++ .+++........+-+.+.. +. .++-.+...+++.+|.+.-
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999986332 2333322222233333321 11 3567788888999987654
No 96
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=35.71 E-value=77 Score=33.14 Aligned_cols=43 Identities=21% Similarity=0.091 Sum_probs=30.9
Q ss_pred HcCCC--eeEEEEEechHHHHhcccccCCCcEEEEEEccCceeeEE
Q 010895 217 RIGLD--MRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYV 260 (498)
Q Consensus 217 ~~~l~--v~vvaivNDTvatlla~ay~~~~~~iglIlGTGtNa~yi 260 (498)
+-|++ +.|++-.-|+.+++++..-..+ ..+.+++||+.-....
T Consensus 228 ~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~-g~~~~s~GTs~~~~~~ 272 (511)
T 3hz6_A 228 QTGFVSGTPVLCGLGDAGAATLGVGVLDD-EDAYLHLGTTGWLARL 272 (511)
T ss_dssp HHCCCTTCEEECCEEHHHHHHHHTTCCST-TCEEEEESSSEEEEEE
T ss_pred hhCCCCCCeEEEECchHHHHHHhCCCCCC-CcEEEEecchhhheee
Confidence 33764 7778889999999998764443 3468899998654444
No 97
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=34.79 E-value=2.3e+02 Score=25.06 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCC
Q 010895 96 LFYALDLGGTNFRVLRVQLGGR 117 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~ 117 (498)
++|+||-|-++.=+++|+..++
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 4799999999999999999775
No 98
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=34.61 E-value=24 Score=34.48 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=16.1
Q ss_pred ceeEEEEEeCCceEEEEEE
Q 010895 94 KGLFYALDLGGTNFRVLRV 112 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V 112 (498)
...+++||+|+|..|++++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp --CEEEEEECSSEEEEEEE
T ss_pred CCeEEEEEEChhhEEEEEE
Confidence 3579999999999999887
No 99
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=34.42 E-value=59 Score=32.09 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=33.8
Q ss_pred cceeEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHH
Q 010895 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAK 153 (498)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~ 153 (498)
+.+.++.+|+||.++=++++++.++. ++. ....... ..++++.++|++.++.
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~------~~s~~~~-lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVV------ELSFSLQ-IGVGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECG------GGCEEES-CCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEe------ecCCCcc-hhHHHHHHHHHHHHHH
Confidence 34778999999999999999985531 111 0111122 2467788888776543
No 100
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=34.35 E-value=88 Score=32.88 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=41.1
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCCccc-cC-hhHHHHHHHHHHHHHHHhc
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~~ 158 (498)
.+-+||+|-.++|..+++..++..+++........+-+.+.. +. .++-.+...+++..|.+.-
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999865433444332222233333321 11 3577888899999997653
No 101
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=32.77 E-value=6.2e+02 Score=29.07 Aligned_cols=131 Identities=11% Similarity=0.115 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeC-Cc----eEEEEEEEeCCCcceeEEEeeeeee
Q 010895 56 RQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVS 130 (498)
Q Consensus 56 ~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~~PtG~E~G~~LaiDlG-GT----nlRv~~V~l~g~~~~~~~~~~~~~~ 130 (498)
.++...|.+.+.+-|... ++-|..+ -|. .-.+||||-| || -.++++|+-.|+ ++... ..++
T Consensus 490 ~~ai~~f~~nL~~lL~~a-----P~~p~~~----~g~-~~~VlaldpG~~~~~~~g~k~a~vd~~G~---~l~~~-~i~~ 555 (1030)
T 3psf_A 490 KLVAKTVRHKFMTKLDQA-----PFIPNVR----DPK-IPKILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVD 555 (1030)
T ss_dssp HHHHHHHHHHHHHHHCCC-----CCCSCTT----SCC-CCCEEEEECTTCCTTTSCEEEEEECTTSC---EEEEE-EECS
T ss_pred HHHHHHHHHHHHHHHhCC-----CCCCCcc----cCC-CCeEEEecCCCCCCCCCCeEEEEECCCCC---EEEEE-EEcC
Confidence 345555666666666432 2223111 121 1279999999 43 689999988775 55432 1222
Q ss_pred cCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceeeeEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHH
Q 010895 131 IPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGE 210 (498)
Q Consensus 131 ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lGftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~l 210 (498)
-|.. ....++ -.+.+.+|+.+++.+ ...+|= ++- +-..+++.
T Consensus 556 ~~~~--~~~~~~----~~~~l~~li~~~~~~-------~IaIGn------------------~s~-------et~~l~~~ 597 (1030)
T 3psf_A 556 NPFD--KTNPEK----FEDTLDNIIQSCQPN-------AIGING------------------PNP-------KTQKFYKR 597 (1030)
T ss_dssp CTTC--SSCCHH----HHHHHHHHHHHHCCS-------EEEECC------------------SST-------HHHHHHHH
T ss_pred CCCC--hhhHHH----HHHHHHHHHHHcCCc-------EEEECC------------------CCH-------HHHHHHHH
Confidence 2321 111111 136788888888643 233331 110 11234555
Q ss_pred HHHHHHHcC------CCeeEEEEEechHHHHhccc
Q 010895 211 LTKAMERIG------LDMRVAALVNDTIGTLAGGR 239 (498)
Q Consensus 211 L~~al~~~~------l~v~vvaivNDTvatlla~a 239 (498)
+.+.++++. .++. +.++||+.|.+.+..
T Consensus 598 l~~~i~~~~~~~~~~~~i~-~~iV~e~gAsvYsaS 631 (1030)
T 3psf_A 598 LQEVLHKKQIVDSRGHTIP-IIYVEDEVAIRYQNS 631 (1030)
T ss_dssp HHHHHHHTTCBCTTSCBCC-EEECCCTTHHHHHTS
T ss_pred HHHHHHhhccccccCCCcc-EEEecchHHHHHHhh
Confidence 556555432 2333 469999998887665
No 102
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=32.37 E-value=52 Score=35.98 Aligned_cols=46 Identities=22% Similarity=0.407 Sum_probs=30.4
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEE---EEcCChhH-HHHHHHHHH
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI---EHSNDGSG-IGAALLAAS 488 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l---~~~~Dgs~-iGAAi~Aa~ 488 (498)
+|++.|||+ .+..+++.+.+.++ + -++.+ .+.+||++ +|.|++|+.
T Consensus 602 ~VvLsGGV~-~N~~Lre~L~~~l~---g----~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 602 TLVFSGGVI-HNRLLRARLAHYLA---D----FTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHTT---T----SEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred EEEEECcHH-HHHHHHHHHHHHhC---C----CEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 689999998 56667777776553 1 12222 24666666 999998863
No 103
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=30.59 E-value=72 Score=32.65 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=21.7
Q ss_pred EEEEeceEecccHhHHHHHHHHHHH
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKE 459 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~ 459 (498)
.|.+.||+-++.+.+++.+.+.+.-
T Consensus 326 aIVfTGGIgEns~~vr~~I~~~l~~ 350 (398)
T 4ijn_A 326 VISFTAGVGENVPPVRRDALAGLGG 350 (398)
T ss_dssp EEEEEHHHHHHCHHHHHHHHTTCGG
T ss_pred EEEECCccccccHHHHHHHHHHHhh
Confidence 5889999999999999999887754
No 104
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=28.47 E-value=54 Score=33.94 Aligned_cols=49 Identities=14% Similarity=0.270 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEE
Q 010895 49 GTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALD 101 (498)
Q Consensus 49 ~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~~PtG~E~G~~LaiD 101 (498)
-+|++.+.+|.+-+.+++.+-... -.+.|++++...+|+..+ ..+.|+|
T Consensus 23 ~is~~~~~~I~~~L~~~l~~~~~~---~~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 23 LLSKQSIERITKILLDELENVREN---EQIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTTC---SSHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred eccHhHHHHHHHHHHHHHHHHHhh---hchhhhhhhceECCCCCC-ceEEEec
Confidence 389999999999999999888765 268999999999997744 4789998
No 105
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=28.34 E-value=36 Score=34.02 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=38.6
Q ss_pred HHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEece
Q 010895 372 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGG 441 (498)
Q Consensus 372 ~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~Aa~iaai~~~~~~~~~~~~~~~~~~I~idGs 441 (498)
+....-|...++.+ ...-.....+++|+.+.++..+.+..++..++.+.+- .+ .|+++|+
T Consensus 226 ~~~~~RLAr~vg~D-~~~~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~--------~~-vv~aG~G 285 (334)
T 3cet_A 226 RSSLVRISKVLCSD-LDQISEIDAENIAKNYYELWKELILENVENVAEKYGS--------KK-VVITGLG 285 (334)
T ss_dssp HHHHHHHHHTTTCC-TTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CE-EEEESTT
T ss_pred HHHHHHHHHHhCCC-hhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------Ce-EEEeCCc
Confidence 34444444444432 2222244566899999999999999999999877643 22 4666665
No 106
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=25.24 E-value=3.7e+02 Score=26.22 Aligned_cols=73 Identities=8% Similarity=0.080 Sum_probs=38.4
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEEeeeeeecCCC-cc-ccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcceee
Q 010895 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPH-LM-TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~ip~~-~~-~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (498)
.+|+||-.....-+++++- ++ ++......+.-+.. +. ......--+.+...|++.+++.+.. .++...++
T Consensus 7 ~iLgIdts~~~~svAl~~~-~~---i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~----~~did~Ia 78 (334)
T 3eno_A 7 IVLGLEGTAHTISCGIIDE-SR---ILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKIS----IHDIDLIG 78 (334)
T ss_dssp EEEEEECSSSEEEEEEEES-SC---CCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCC----GGGCCEEE
T ss_pred eEEEEECCCcCeEEEEEEC-CE---EEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCC----HHHCCEEE
Confidence 5899999988999999973 32 43322111211100 00 0001222345666677777776653 23455566
Q ss_pred eEe
Q 010895 174 FTF 176 (498)
Q Consensus 174 ftF 176 (498)
+|.
T Consensus 79 v~~ 81 (334)
T 3eno_A 79 FSM 81 (334)
T ss_dssp EEC
T ss_pred EEc
Confidence 654
No 107
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=23.35 E-value=1.6e+02 Score=23.62 Aligned_cols=21 Identities=24% Similarity=0.177 Sum_probs=16.4
Q ss_pred eEEEEEeCCceEEEEEEEeCC
Q 010895 96 LFYALDLGGTNFRVLRVQLGG 116 (498)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g 116 (498)
++||||+|-..+=+++-+..+
T Consensus 2 riLglD~G~kriGvAvsd~~~ 22 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGV 22 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCC
T ss_pred cEEEEEeCCCEEEEEEEeCCC
Confidence 489999999888887766543
No 108
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=22.80 E-value=9.7e+02 Score=28.04 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=57.0
Q ss_pred eEEEEEeC-Cc----eEEEEEEEeCCCcceeEEEeeeeeecCCCccccChhHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 010895 96 LFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (498)
Q Consensus 96 ~~LaiDlG-GT----nlRv~~V~l~g~~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (498)
.+||||-| || -.++++|+-.|+ ++... ..++-|.. ....++ -.+.+.+|+.+++++ ..
T Consensus 517 ~VlaldpG~r~~g~~g~k~a~vD~~G~---vl~~~-~i~~~~~~--~~~~~~----a~~~l~~li~~~~~~-------vI 579 (1219)
T 3psi_A 517 KILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVDNPFD--KTNPEK----FEDTLDNIIQSCQPN-------AI 579 (1219)
T ss_dssp CEEEEECTTCCTTTTCEEEEEECTTSC---EEEEE-EECSCTTC--SSCSHH----HHHHHHHHHHHHCCS-------EE
T ss_pred eEEEecCCCCCCCCCceEEEEECCCCC---EEEEE-EEcCCCCC--hhhHHH----HHHHHHHHHHHcCCc-------EE
Confidence 79999999 43 789999988775 65432 12222321 111111 136788888888653 33
Q ss_pred eeeeEeeeeeeeccCCceEEEccCCccccCCCCCCcHHHHHHHHHHHcC------CCeeEEEEEechHHHHhccc
Q 010895 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG------LDMRVAALVNDTIGTLAGGR 239 (498)
Q Consensus 171 ~lGftFSfP~~q~~i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~~~~------l~v~vvaivNDTvatlla~a 239 (498)
.+|= +| + +-..+++.|.+.++++. .++. +.++||++|.+.+..
T Consensus 580 aIGn-~s--------------r----------et~~l~~~l~~~i~~~~~~~~~~~~i~-vviV~e~gAsvYsaS 628 (1219)
T 3psi_A 580 GING-PN--------------P----------KTQKFYKRLQEVLHKKQIVDSRGHTIP-IIYVEDEVAIRYQNS 628 (1219)
T ss_dssp EECC-SS--------------T----------HHHHHHHHHHHHHHHTTCBCSSSCBCC-EEECCCTTHHHHHTS
T ss_pred EECC-CC--------------H----------HHHHHHHHHHHHHHhhccccccCCCcc-EEEECchHHHHHhcC
Confidence 3431 11 0 01235555666555432 2333 469999998887765
No 109
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=22.67 E-value=2.5e+02 Score=27.87 Aligned_cols=61 Identities=18% Similarity=0.103 Sum_probs=33.6
Q ss_pred ceeEEEEEeCCceEEEEEEEeCCC-cceeEEEeeee-eecCCCccccChhHHHHHHHHHHHHHHH
Q 010895 94 KGLFYALDLGGTNFRVLRVQLGGR-EGRVVKQEFEE-VSIPPHLMTGSSHELFDYIAAALAKFVA 156 (498)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~-~~~~~~~~~~~-~~ip~~~~~~~~~~lfd~Ia~~I~~fl~ 156 (498)
.-++.+||+|-+.+|+.+.+.... ....+....+. .++...+-....+ -+-+.+.+.+|.+
T Consensus 2 ~~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~--~~~~~~~l~~f~~ 64 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN--SVTIDAYLTMLLA 64 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS--HHHHHHHHHHHHT
T ss_pred CCEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC--HHHHHHHHHHHHH
Confidence 346899999999999999988532 22233322111 3344444322111 3445555666654
No 110
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=22.57 E-value=3.4e+02 Score=26.39 Aligned_cols=27 Identities=26% Similarity=0.438 Sum_probs=22.0
Q ss_pred CccceeEEEEEeCCceEEEEEEEeCCC
Q 010895 91 GDEKGLFYALDLGGTNFRVLRVQLGGR 117 (498)
Q Consensus 91 G~E~G~~LaiDlGGTnlRv~~V~l~g~ 117 (498)
+.....++.+|+||.++-+.+++..+.
T Consensus 202 ~~~~~~vlV~D~Gggt~dvsv~~~~~~ 228 (394)
T 3qfu_A 202 SDKEHQIIVYDLGGGTFDVSLLSIENG 228 (394)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCCCceEEEEEcCCCceeEEEEEEeCC
Confidence 334457899999999999999998654
No 111
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=21.58 E-value=4.8e+02 Score=25.23 Aligned_cols=47 Identities=15% Similarity=0.255 Sum_probs=30.0
Q ss_pred EEEEeceEecccHhHHHHHHHHHHHHhCcCCCccEEEE----EcCChhHHHHHHHHH
Q 010895 435 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE----HSNDGSGIGAALLAA 487 (498)
Q Consensus 435 ~I~idGsv~~~~p~f~~~l~~~l~~l~~~~~~~~i~l~----~~~Dgs~iGAAi~Aa 487 (498)
.|++.|||+ .+..+++.+.+.+++. + .++.+. ..++|..+|+|....
T Consensus 247 ~vvlsGGVa-~N~~l~~~l~~~l~~~-g----~~v~~p~~~~~~D~G~~iG~a~~~~ 297 (330)
T 2ivn_A 247 EVVLVGGVA-ANNRLREMLRIMTEDR-G----IKFFVPPYDLCRDNGAMIAYTGLRM 297 (330)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHHHHH-T----CEEECCCHHHHSSCHHHHHHHHHHH
T ss_pred eEEEEccHH-HHHHHHHHHHHHHHHc-C----CEEEecCCCCCChhHHHHHHHHHHH
Confidence 588999997 5677888888776542 1 123222 245566888877543
No 112
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=20.35 E-value=43 Score=33.18 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=22.0
Q ss_pred HHHHHHHHHHcCCCeeEEEEEechHHHHhcccc
Q 010895 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (498)
Q Consensus 208 ~~lL~~al~~~~l~v~vvaivNDTvatlla~ay 240 (498)
.+.+.+++++.|++ ++.++|+.+|++++...
T Consensus 151 r~~~~~a~~~aGl~--~~~li~Ep~Aaa~~~~~ 181 (383)
T 1dkg_D 151 RQATKDAGRIAGLE--VKRIINEPTAAALAYGL 181 (383)
T ss_dssp HHHHHHHHHHTTCE--ESCCCBHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCc--eEEEeccHHHHHHHHHh
Confidence 45566677666765 36789999998886554
No 113
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=20.22 E-value=1.5e+02 Score=23.00 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 010895 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (498)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (498)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356667777778999999999999999999999864
Done!