Query 010897
Match_columns 498
No_of_seqs 320 out of 2713
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 05:48:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010897.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010897hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1383 Glutamate decarboxylas 100.0 1.6E-64 3.4E-69 489.6 34.7 423 9-455 33-458 (491)
2 TIGR01788 Glu-decarb-GAD gluta 100.0 3.2E-60 7E-65 483.9 46.3 428 16-444 1-430 (431)
3 COG0076 GadB Glutamate decarbo 100.0 1.6E-58 3.5E-63 472.0 39.7 367 31-409 32-407 (460)
4 PLN02590 probable tyrosine dec 100.0 4.1E-56 8.9E-61 461.3 41.9 414 13-444 85-533 (539)
5 PLN02880 tyrosine decarboxylas 100.0 9.8E-53 2.1E-57 436.6 38.2 413 14-445 38-486 (490)
6 PF00282 Pyridoxal_deC: Pyrido 100.0 5.1E-53 1.1E-57 425.1 31.5 348 20-381 1-373 (373)
7 TIGR03799 NOD_PanD_pyr putativ 100.0 1.7E-48 3.6E-53 405.4 40.1 401 22-443 52-518 (522)
8 PLN02263 serine decarboxylase 100.0 6.9E-47 1.5E-51 382.6 39.4 356 39-444 75-444 (470)
9 KOG0628 Aromatic-L-amino-acid/ 100.0 2.3E-47 5.1E-52 368.9 30.4 414 14-445 29-473 (511)
10 PRK02769 histidine decarboxyla 100.0 4.9E-44 1.1E-48 360.4 38.2 345 52-444 18-373 (380)
11 PLN03032 serine decarboxylase; 100.0 3.2E-44 7E-49 358.9 36.5 328 71-439 38-372 (374)
12 TIGR03811 tyr_de_CO2_Ent tyros 100.0 8.1E-44 1.8E-48 372.7 40.1 342 31-383 54-504 (608)
13 KOG0629 Glutamate decarboxylas 100.0 1.6E-40 3.5E-45 317.9 24.0 401 19-438 63-504 (510)
14 PRK13520 L-tyrosine decarboxyl 100.0 5.5E-38 1.2E-42 319.5 39.3 369 37-442 2-370 (371)
15 cd06450 DOPA_deC_like DOPA dec 100.0 3.4E-38 7.4E-43 317.9 31.7 331 61-439 3-344 (345)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.5E-35 3.2E-40 301.9 40.1 365 39-439 2-372 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 7.8E-35 1.7E-39 283.9 37.1 346 65-447 10-381 (386)
18 COG0520 csdA Selenocysteine ly 100.0 7.9E-34 1.7E-38 287.4 37.8 343 65-442 31-404 (405)
19 TIGR00461 gcvP glycine dehydro 100.0 2.9E-31 6.3E-36 286.6 40.3 425 38-498 467-937 (939)
20 PRK10874 cysteine sulfinate de 100.0 7.5E-31 1.6E-35 269.8 38.3 341 65-444 28-399 (401)
21 TIGR03392 FeS_syn_CsdA cystein 100.0 5.7E-31 1.2E-35 270.4 36.7 346 58-444 20-396 (398)
22 TIGR03402 FeS_nifS cysteine de 100.0 3.2E-30 6.9E-35 263.2 39.6 342 65-446 8-375 (379)
23 PRK04366 glycine dehydrogenase 100.0 1.9E-30 4.2E-35 270.9 38.0 394 31-458 45-462 (481)
24 PRK09295 bifunctional cysteine 100.0 3.7E-30 8E-35 265.0 37.8 341 65-442 32-403 (406)
25 PRK05367 glycine dehydrogenase 100.0 2.8E-30 6.1E-35 284.0 38.4 426 37-498 478-945 (954)
26 TIGR01977 am_tr_V_EF2568 cyste 100.0 5E-30 1.1E-34 261.5 37.1 338 67-439 11-375 (376)
27 PLN02651 cysteine desulfurase 100.0 4.4E-30 9.5E-35 260.6 36.3 328 65-431 8-364 (364)
28 TIGR03403 nifS_epsilon cystein 100.0 2E-29 4.3E-34 257.5 39.8 345 65-446 8-378 (382)
29 cd06453 SufS_like Cysteine des 100.0 7.9E-30 1.7E-34 259.7 35.6 337 67-437 10-373 (373)
30 TIGR01979 sufS cysteine desulf 100.0 4.1E-29 9E-34 257.1 37.8 342 67-444 29-402 (403)
31 PLN02855 Bifunctional selenocy 100.0 2.8E-29 6E-34 259.9 36.2 349 66-447 42-422 (424)
32 TIGR02006 IscS cysteine desulf 100.0 1.3E-28 2.8E-33 253.0 39.0 342 65-446 12-380 (402)
33 PLN02414 glycine dehydrogenase 100.0 9.2E-29 2E-33 270.7 38.7 421 37-498 504-977 (993)
34 PRK02948 cysteine desulfurase; 100.0 1.8E-28 3.9E-33 250.5 38.4 339 65-444 9-375 (381)
35 TIGR01976 am_tr_V_VC1184 cyste 100.0 9.9E-29 2.1E-33 253.8 34.1 338 65-437 26-397 (397)
36 PF00266 Aminotran_5: Aminotra 100.0 5.2E-28 1.1E-32 246.1 34.4 335 65-433 8-371 (371)
37 PRK00451 glycine dehydrogenase 100.0 8.1E-28 1.8E-32 250.6 36.1 368 30-441 41-446 (447)
38 cd06451 AGAT_like Alanine-glyo 100.0 3.1E-28 6.7E-33 246.4 30.9 331 67-441 9-355 (356)
39 COG0436 Aspartate/tyrosine/aro 100.0 4.8E-28 1E-32 245.6 30.7 345 58-442 31-390 (393)
40 PRK12566 glycine dehydrogenase 100.0 1.6E-27 3.4E-32 256.1 33.6 428 35-498 477-945 (954)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.2E-27 9.1E-32 240.4 34.6 330 67-443 31-381 (387)
42 PRK14012 cysteine desulfurase; 100.0 5.9E-27 1.3E-31 240.9 35.6 341 65-447 12-383 (404)
43 TIGR02326 transamin_PhnW 2-ami 100.0 2.4E-27 5.2E-32 240.6 31.5 317 91-442 31-361 (363)
44 TIGR03235 DNA_S_dndA cysteine 100.0 1.1E-26 2.4E-31 234.7 35.5 304 65-404 7-320 (353)
45 PLN02409 serine--glyoxylate am 100.0 3.7E-27 8E-32 241.7 31.8 334 67-444 19-373 (401)
46 TIGR01814 kynureninase kynuren 100.0 1.2E-26 2.6E-31 238.7 33.3 330 67-441 38-405 (406)
47 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.9E-26 8.5E-31 231.4 33.0 329 67-441 12-360 (361)
48 cd00613 GDC-P Glycine cleavage 100.0 4.4E-26 9.5E-31 234.2 32.8 340 58-437 23-398 (398)
49 TIGR03531 selenium_SpcS O-phos 100.0 2.4E-26 5.1E-31 233.9 30.0 383 22-441 20-444 (444)
50 COG0079 HisC Histidinol-phosph 100.0 2.8E-26 6.2E-31 228.8 29.7 328 49-443 24-354 (356)
51 KOG1549 Cysteine desulfurase N 100.0 2.6E-26 5.6E-31 224.9 28.5 344 61-447 48-422 (428)
52 PRK13479 2-aminoethylphosphona 100.0 7.1E-26 1.5E-30 230.2 32.5 338 65-444 13-364 (368)
53 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 7E-26 1.5E-30 229.0 31.0 333 66-440 8-354 (355)
54 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.5E-25 7.5E-30 225.0 31.8 299 97-443 53-368 (370)
55 TIGR01822 2am3keto_CoA 2-amino 99.9 5.1E-25 1.1E-29 226.0 30.8 342 54-444 37-390 (393)
56 PLN02721 threonine aldolase 99.9 2.4E-25 5.2E-30 225.0 27.5 325 61-442 11-351 (353)
57 PRK07179 hypothetical protein; 99.9 5.5E-25 1.2E-29 226.5 29.6 327 67-444 68-399 (407)
58 PRK06108 aspartate aminotransf 99.9 2.5E-24 5.3E-29 220.1 30.8 340 59-441 28-380 (382)
59 PLN03026 histidinol-phosphate 99.9 6.6E-24 1.4E-28 216.2 32.3 358 16-440 17-379 (380)
60 COG0075 Serine-pyruvate aminot 99.9 4.8E-24 1E-28 210.1 29.9 335 67-444 15-364 (383)
61 PLN00145 tyrosine/nicotianamin 99.9 1.6E-23 3.5E-28 216.4 35.4 336 67-441 69-422 (430)
62 PTZ00094 serine hydroxymethylt 99.9 6.4E-24 1.4E-28 220.8 32.4 365 39-445 19-410 (452)
63 PLN02724 Molybdenum cofactor s 99.9 3.5E-24 7.5E-29 236.4 31.9 346 70-442 49-487 (805)
64 PLN00143 tyrosine/nicotianamin 99.9 2.2E-23 4.7E-28 214.5 35.2 367 39-442 15-403 (409)
65 PRK03080 phosphoserine aminotr 99.9 1.5E-24 3.2E-29 220.7 26.1 334 65-446 20-376 (378)
66 PLN00175 aminotransferase fami 99.9 1.5E-23 3.3E-28 215.7 32.9 342 57-441 56-411 (413)
67 PRK06207 aspartate aminotransf 99.9 2.2E-23 4.7E-28 214.2 33.8 334 67-443 53-402 (405)
68 PRK08361 aspartate aminotransf 99.9 7.9E-24 1.7E-28 216.8 30.1 330 68-441 47-388 (391)
69 PRK08363 alanine aminotransfer 99.9 2.8E-23 6.1E-28 213.3 33.8 352 53-443 28-394 (398)
70 PRK06290 aspartate aminotransf 99.9 2E-23 4.4E-28 214.4 31.5 346 54-444 43-406 (410)
71 cd06454 KBL_like KBL_like; thi 99.9 1.1E-23 2.4E-28 212.5 29.1 325 67-440 15-348 (349)
72 PRK08056 threonine-phosphate d 99.9 1.6E-23 3.4E-28 211.9 29.9 315 67-441 33-353 (356)
73 PRK06225 aspartate aminotransf 99.9 2.7E-23 5.8E-28 212.2 31.8 330 67-446 41-379 (380)
74 PRK13355 bifunctional HTH-doma 99.9 4.1E-23 8.9E-28 218.5 34.2 336 68-442 163-513 (517)
75 PRK07682 hypothetical protein; 99.9 1.9E-23 4.1E-28 213.1 30.5 330 69-443 35-376 (378)
76 PRK08960 hypothetical protein; 99.9 2.9E-23 6.3E-28 212.4 31.6 338 58-441 35-382 (387)
77 PRK05764 aspartate aminotransf 99.9 6E-23 1.3E-27 210.6 33.8 342 58-443 34-391 (393)
78 PRK05957 aspartate aminotransf 99.9 5.1E-23 1.1E-27 210.6 32.6 342 58-442 30-384 (389)
79 PRK01533 histidinol-phosphate 99.9 7.2E-24 1.6E-28 214.7 25.1 311 67-443 42-355 (366)
80 PRK04870 histidinol-phosphate 99.9 1.7E-23 3.6E-28 211.8 27.6 313 67-440 39-355 (356)
81 PRK14807 histidinol-phosphate 99.9 7.6E-23 1.7E-27 206.5 32.2 312 67-441 35-350 (351)
82 PRK09082 methionine aminotrans 99.9 2.5E-23 5.5E-28 212.7 28.9 336 58-434 33-380 (386)
83 PTZ00433 tyrosine aminotransfe 99.9 9.7E-23 2.1E-27 210.1 33.4 351 54-443 32-408 (412)
84 PLN02187 rooty/superroot1 99.9 1.2E-22 2.7E-27 211.3 34.4 338 69-443 85-438 (462)
85 TIGR01141 hisC histidinol-phos 99.9 1.5E-23 3.3E-28 211.3 26.6 310 67-437 32-345 (346)
86 cd00609 AAT_like Aspartate ami 99.9 7.2E-23 1.6E-27 206.1 31.5 331 68-438 12-349 (350)
87 cd00378 SHMT Serine-glycine hy 99.9 3.9E-23 8.4E-28 212.7 30.1 358 39-443 4-385 (402)
88 PRK13580 serine hydroxymethylt 99.9 4.9E-23 1.1E-27 209.7 30.1 371 39-444 34-446 (493)
89 PRK07681 aspartate aminotransf 99.9 1.5E-22 3.3E-27 207.9 34.2 337 58-439 35-384 (399)
90 PRK07337 aminotransferase; Val 99.9 7.6E-23 1.7E-27 209.4 31.3 323 60-423 35-371 (388)
91 cd06502 TA_like Low-specificit 99.9 5.8E-24 1.3E-28 213.6 22.5 320 61-439 3-337 (338)
92 PRK12414 putative aminotransfe 99.9 5.2E-23 1.1E-27 210.2 29.8 332 58-431 32-375 (384)
93 PLN02656 tyrosine transaminase 99.9 1.1E-22 2.5E-27 209.3 32.4 347 56-441 32-401 (409)
94 PRK05387 histidinol-phosphate 99.9 5.9E-23 1.3E-27 207.6 29.7 313 67-442 37-352 (353)
95 PRK06939 2-amino-3-ketobutyrat 99.9 6.4E-23 1.4E-27 210.7 30.0 343 53-444 40-394 (397)
96 cd00616 AHBA_syn 3-amino-5-hyd 99.9 3.6E-23 7.8E-28 209.0 27.3 321 75-438 4-352 (352)
97 PRK08912 hypothetical protein; 99.9 1.9E-22 4.2E-27 206.4 32.9 331 69-440 41-383 (387)
98 PRK06358 threonine-phosphate d 99.9 1E-22 2.2E-27 205.7 29.9 313 67-441 32-353 (354)
99 TIGR01437 selA_rel uncharacter 99.9 1.5E-22 3.3E-27 204.6 30.8 323 67-440 24-362 (363)
100 PRK07309 aromatic amino acid a 99.9 2.6E-22 5.7E-27 205.5 33.0 342 58-444 33-389 (391)
101 PRK07324 transaminase; Validat 99.9 2.3E-22 4.9E-27 204.5 32.0 315 74-441 45-368 (373)
102 PRK05958 8-amino-7-oxononanoat 99.9 1.1E-22 2.4E-27 208.0 29.5 338 53-440 37-384 (385)
103 TIGR00858 bioF 8-amino-7-oxono 99.9 1.1E-22 2.4E-27 205.9 29.0 335 53-437 14-359 (360)
104 PRK01688 histidinol-phosphate 99.9 1.3E-23 2.9E-28 211.8 22.1 285 99-437 61-350 (351)
105 TIGR01265 tyr_nico_aTase tyros 99.9 1.1E-21 2.3E-26 201.8 36.5 347 54-440 30-398 (403)
106 KOG0259 Tyrosine aminotransfer 99.9 4.5E-22 9.8E-27 189.3 30.4 335 68-440 79-430 (447)
107 TIGR01264 tyr_amTase_E tyrosin 99.9 4.2E-22 9.2E-27 204.8 33.1 343 58-441 34-397 (401)
108 PRK00011 glyA serine hydroxyme 99.9 1.3E-22 2.9E-27 209.5 29.5 333 67-443 36-389 (416)
109 PRK07683 aminotransferase A; V 99.9 4.3E-22 9.2E-27 203.7 32.9 340 58-441 31-381 (387)
110 COG1003 GcvP Glycine cleavage 99.9 5.8E-22 1.3E-26 191.8 31.6 386 32-451 40-455 (496)
111 TIGR03537 DapC succinyldiamino 99.9 3.5E-22 7.6E-27 201.6 31.0 327 67-436 13-346 (350)
112 PTZ00377 alanine aminotransfer 99.9 6E-22 1.3E-26 207.9 33.9 332 70-443 91-475 (481)
113 PRK09105 putative aminotransfe 99.9 1.3E-22 2.9E-27 205.8 27.9 310 67-441 56-368 (370)
114 PRK05942 aspartate aminotransf 99.9 4.3E-22 9.3E-27 204.2 31.8 324 69-440 50-386 (394)
115 TIGR01821 5aminolev_synth 5-am 99.9 2.3E-22 5E-27 206.8 29.6 331 65-444 57-397 (402)
116 PRK00950 histidinol-phosphate 99.9 2.1E-22 4.6E-27 204.1 28.3 310 67-441 47-360 (361)
117 PRK02610 histidinol-phosphate 99.9 3.4E-22 7.4E-27 203.4 29.8 322 67-444 41-372 (374)
118 PRK09265 aminotransferase AlaT 99.9 1E-21 2.2E-26 202.1 33.6 336 68-443 50-401 (404)
119 PRK13392 5-aminolevulinate syn 99.9 2.7E-22 6E-27 206.7 29.2 333 64-444 57-398 (410)
120 TIGR03540 DapC_direct LL-diami 99.9 1.4E-21 3.1E-26 199.7 34.2 323 59-422 33-367 (383)
121 PRK02731 histidinol-phosphate 99.9 2.4E-22 5.3E-27 204.2 28.4 316 67-442 45-365 (367)
122 PRK03158 histidinol-phosphate 99.9 2.5E-22 5.3E-27 203.5 28.1 314 67-440 42-358 (359)
123 TIGR01825 gly_Cac_T_rel pyrido 99.9 4E-22 8.6E-27 204.0 29.8 341 52-443 30-381 (385)
124 PRK05166 histidinol-phosphate 99.9 4.6E-22 1E-26 202.3 30.0 317 67-441 49-369 (371)
125 PRK08068 transaminase; Reviewe 99.9 1.1E-21 2.3E-26 200.9 32.9 323 58-422 35-370 (389)
126 PRK09147 succinyldiaminopimela 99.9 9.9E-22 2.1E-26 201.7 32.6 345 54-441 28-394 (396)
127 PRK07777 aminotransferase; Val 99.9 1.7E-21 3.8E-26 199.3 33.8 328 70-438 40-381 (387)
128 PRK13034 serine hydroxymethylt 99.9 8E-22 1.7E-26 202.7 31.0 361 39-444 13-393 (416)
129 PRK15481 transcriptional regul 99.9 3.7E-22 8E-27 207.0 28.7 368 9-442 54-430 (431)
130 cd00611 PSAT_like Phosphoserin 99.9 6.1E-23 1.3E-27 207.2 22.2 332 65-440 7-353 (355)
131 PRK09276 LL-diaminopimelate am 99.9 1.5E-21 3.3E-26 199.6 31.9 323 58-422 34-369 (385)
132 PRK07366 succinyldiaminopimela 99.9 2E-21 4.3E-26 198.9 32.7 344 54-439 29-386 (388)
133 PRK07550 hypothetical protein; 99.9 2.7E-21 5.9E-26 197.8 33.7 339 57-438 31-382 (386)
134 PRK06836 aspartate aminotransf 99.9 3.3E-21 7.2E-26 197.6 33.8 345 58-443 36-391 (394)
135 PRK06348 aspartate aminotransf 99.9 2.5E-21 5.5E-26 197.8 32.0 322 69-434 44-376 (384)
136 PRK09064 5-aminolevulinate syn 99.9 1.5E-21 3.3E-26 201.1 30.4 332 64-444 57-398 (407)
137 TIGR03538 DapC_gpp succinyldia 99.9 2.7E-21 5.9E-26 198.3 31.9 343 54-438 27-390 (393)
138 KOG0257 Kynurenine aminotransf 99.9 3.9E-22 8.4E-27 193.1 23.8 306 41-381 18-344 (420)
139 PLN03226 serine hydroxymethylt 99.9 5.8E-21 1.3E-25 198.0 34.1 375 39-446 19-422 (475)
140 PRK04635 histidinol-phosphate 99.9 3.7E-22 8E-27 201.7 24.0 282 99-439 64-351 (354)
141 PRK03317 histidinol-phosphate 99.9 1.3E-21 2.8E-26 198.9 27.6 318 67-443 39-364 (368)
142 PRK05355 3-phosphoserine/phosp 99.9 4.8E-22 1E-26 200.3 24.1 332 65-442 11-357 (360)
143 TIGR01364 serC_1 phosphoserine 99.9 1.2E-21 2.5E-26 196.5 26.0 302 91-442 33-347 (349)
144 PRK08153 histidinol-phosphate 99.9 3.7E-21 8E-26 195.4 29.9 320 67-445 45-367 (369)
145 PRK06107 aspartate aminotransf 99.9 6.1E-21 1.3E-25 196.1 31.6 342 58-443 36-400 (402)
146 COG0156 BioF 7-keto-8-aminopel 99.9 2.9E-21 6.3E-26 192.3 28.0 332 56-440 40-387 (388)
147 PRK13393 5-aminolevulinate syn 99.9 6.4E-21 1.4E-25 196.3 31.0 329 67-444 59-397 (406)
148 PRK05937 8-amino-7-oxononanoat 99.9 5.8E-21 1.3E-25 194.1 30.1 292 92-444 53-351 (370)
149 PRK07908 hypothetical protein; 99.9 5.4E-21 1.2E-25 192.9 29.4 311 67-442 35-346 (349)
150 PRK11658 UDP-4-amino-4-deoxy-L 99.9 5.6E-21 1.2E-25 194.5 29.7 329 70-441 14-377 (379)
151 PRK09148 aminotransferase; Val 99.9 3.6E-20 7.7E-25 190.5 35.3 345 56-442 31-389 (405)
152 TIGR01366 serC_3 phosphoserine 99.9 1.9E-21 4.2E-26 196.2 25.1 331 65-443 11-360 (361)
153 PRK03321 putative aminotransfe 99.9 1.7E-21 3.8E-26 196.8 24.9 310 67-442 35-350 (352)
154 PRK07568 aspartate aminotransf 99.9 2E-20 4.4E-25 192.2 32.8 338 60-443 35-392 (397)
155 PLN02483 serine palmitoyltrans 99.9 1.1E-20 2.3E-25 197.7 31.0 306 92-444 143-467 (489)
156 PRK04781 histidinol-phosphate 99.9 6.8E-21 1.5E-25 193.1 28.3 291 99-441 63-361 (364)
157 COG0399 WecE Predicted pyridox 99.9 1.6E-20 3.6E-25 185.5 29.7 329 69-442 14-372 (374)
158 PRK13238 tnaA tryptophanase/L- 99.9 1.8E-20 3.9E-25 194.0 30.9 335 71-447 58-437 (460)
159 PRK06425 histidinol-phosphate 99.9 7.2E-21 1.6E-25 190.6 26.4 282 99-441 44-331 (332)
160 PLN02231 alanine transaminase 99.9 5.2E-20 1.1E-24 193.9 33.9 349 54-443 127-527 (534)
161 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.6E-20 3.4E-25 191.7 29.1 328 70-441 10-380 (380)
162 PRK08636 aspartate aminotransf 99.9 6.2E-20 1.3E-24 188.7 33.6 346 58-443 36-400 (403)
163 PLN02822 serine palmitoyltrans 99.9 1.6E-20 3.5E-25 196.0 29.5 350 52-444 106-478 (481)
164 PRK14808 histidinol-phosphate 99.9 1.7E-20 3.7E-25 187.9 28.0 299 67-439 32-333 (335)
165 PRK07392 threonine-phosphate d 99.9 2.9E-20 6.2E-25 188.4 29.8 316 67-442 35-358 (360)
166 PLN02672 methionine S-methyltr 99.9 8.1E-20 1.7E-24 201.1 35.1 341 55-442 697-1079(1082)
167 PRK14809 histidinol-phosphate 99.9 4.1E-20 9E-25 187.1 30.5 309 67-441 43-355 (357)
168 PRK05839 hypothetical protein; 99.9 1.4E-19 3.1E-24 184.2 32.4 335 54-441 23-372 (374)
169 PLN02955 8-amino-7-oxononanoat 99.9 4.8E-20 1E-24 187.7 28.6 343 58-444 105-462 (476)
170 PF00155 Aminotran_1_2: Aminot 99.9 2.1E-20 4.6E-25 189.7 25.8 323 70-437 21-363 (363)
171 PRK08175 aminotransferase; Val 99.9 2.1E-19 4.6E-24 184.3 33.4 340 58-441 32-387 (395)
172 COG2008 GLY1 Threonine aldolas 99.9 1.2E-20 2.6E-25 180.8 22.0 321 66-441 10-341 (342)
173 PLN02271 serine hydroxymethylt 99.9 1.6E-19 3.5E-24 184.5 31.6 345 67-442 159-539 (586)
174 PRK10534 L-threonine aldolase; 99.9 1.7E-20 3.6E-25 188.2 24.2 309 67-441 11-331 (333)
175 PLN02450 1-aminocyclopropane-1 99.9 6.6E-20 1.4E-24 191.2 28.2 313 87-442 82-429 (468)
176 PRK06855 aminotransferase; Val 99.9 4.3E-19 9.3E-24 183.9 33.8 337 67-443 48-429 (433)
177 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.2E-19 2.7E-24 181.7 28.8 331 39-441 7-345 (346)
178 KOG2862 Alanine-glyoxylate ami 99.9 6.3E-19 1.4E-23 163.7 30.6 333 74-443 30-382 (385)
179 PRK08861 cystathionine gamma-s 99.9 1E-19 2.2E-24 184.3 28.0 293 91-447 53-387 (388)
180 PRK07590 L,L-diaminopimelate a 99.9 2.3E-19 5E-24 184.9 31.1 355 39-439 17-407 (409)
181 PLN02376 1-aminocyclopropane-1 99.9 2E-19 4.3E-24 188.4 29.4 314 87-443 90-438 (496)
182 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.6E-19 1.2E-23 179.1 31.1 328 70-441 11-375 (376)
183 PRK05968 hypothetical protein; 99.9 1.4E-19 3.1E-24 184.4 26.6 284 99-444 67-387 (389)
184 COG1168 MalY Bifunctional PLP- 99.9 1.3E-18 2.9E-23 167.1 30.6 331 68-438 39-381 (388)
185 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2E-19 4.3E-24 180.0 25.7 274 99-437 51-329 (330)
186 PRK03967 histidinol-phosphate 99.9 4.9E-19 1.1E-23 177.6 28.5 299 67-442 31-333 (337)
187 PRK08134 O-acetylhomoserine am 99.9 1.4E-18 3.1E-23 178.5 32.4 300 99-447 68-431 (433)
188 PRK06767 methionine gamma-lyas 99.9 2.2E-19 4.7E-24 183.1 26.2 285 99-443 65-385 (386)
189 PRK09440 avtA valine--pyruvate 99.9 9.2E-19 2E-23 180.9 31.3 337 70-445 48-413 (416)
190 PRK07504 O-succinylhomoserine 99.9 6.3E-19 1.4E-23 180.1 29.6 288 99-445 69-397 (398)
191 PRK08776 cystathionine gamma-s 99.9 6E-19 1.3E-23 180.2 29.4 289 99-447 64-394 (405)
192 PLN03227 serine palmitoyltrans 99.9 6.5E-19 1.4E-23 179.9 29.5 333 66-444 11-383 (392)
193 PRK06959 putative threonine-ph 99.9 3.6E-19 7.8E-24 178.6 26.7 277 98-447 56-337 (339)
194 TIGR03539 DapC_actino succinyl 99.8 1E-18 2.2E-23 176.8 30.2 336 38-435 5-354 (357)
195 PLN02368 alanine transaminase 99.8 3.5E-19 7.7E-24 182.0 26.7 271 68-378 82-392 (407)
196 PLN02242 methionine gamma-lyas 99.8 1.3E-19 2.9E-24 185.6 23.6 292 90-445 75-417 (418)
197 PRK09275 aspartate aminotransf 99.8 9.2E-19 2E-23 182.1 30.0 351 69-445 115-519 (527)
198 PLN02414 glycine dehydrogenase 99.8 2.1E-18 4.5E-23 189.7 34.3 348 35-439 83-465 (993)
199 PRK07505 hypothetical protein; 99.8 1.1E-18 2.4E-23 179.3 30.3 346 53-443 44-399 (402)
200 PRK05367 glycine dehydrogenase 99.8 1.4E-18 3E-23 192.0 32.9 349 36-438 57-437 (954)
201 PRK08045 cystathionine gamma-s 99.8 7.7E-19 1.7E-23 178.5 28.5 287 99-445 56-384 (386)
202 TIGR01328 met_gam_lyase methio 99.8 5.3E-19 1.2E-23 180.2 27.4 287 99-443 63-390 (391)
203 PLN02607 1-aminocyclopropane-1 99.8 6.4E-19 1.4E-23 182.5 28.4 313 87-443 91-437 (447)
204 TIGR03542 DAPAT_plant LL-diami 99.8 1.3E-18 2.8E-23 178.9 30.4 333 58-438 36-399 (402)
205 PRK07865 N-succinyldiaminopime 99.8 9.7E-19 2.1E-23 177.5 28.9 322 55-437 27-362 (364)
206 KOG1368 Threonine aldolase [Am 99.8 1.5E-19 3.3E-24 166.8 20.5 320 67-443 33-369 (384)
207 cd00614 CGS_like CGS_like: Cys 99.8 5.4E-19 1.2E-23 179.4 26.3 287 91-441 40-368 (369)
208 PRK08637 hypothetical protein; 99.8 5.3E-19 1.1E-23 180.9 26.4 331 70-444 23-387 (388)
209 PRK08133 O-succinylhomoserine 99.8 8.7E-19 1.9E-23 178.7 27.7 285 98-442 64-389 (390)
210 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.1E-18 2.5E-23 176.7 28.1 326 70-438 5-363 (363)
211 PRK09028 cystathionine beta-ly 99.8 9E-19 2E-23 177.3 27.0 293 90-446 60-390 (394)
212 PRK07050 cystathionine beta-ly 99.8 4.2E-19 9.2E-24 181.0 24.7 286 99-443 69-391 (394)
213 PRK07811 cystathionine gamma-s 99.8 1.7E-18 3.6E-23 176.5 28.4 288 91-442 61-387 (388)
214 PRK08249 cystathionine gamma-s 99.8 2.4E-18 5.3E-23 175.5 29.5 287 99-445 68-395 (398)
215 cd00615 Orn_deC_like Ornithine 99.8 5.5E-20 1.2E-24 180.9 16.7 227 97-360 61-294 (294)
216 TIGR01324 cysta_beta_ly_B cyst 99.8 4.9E-19 1.1E-23 179.2 24.0 290 90-443 49-376 (377)
217 PTZ00376 aspartate aminotransf 99.8 5.3E-19 1.1E-23 181.8 24.7 307 85-442 66-402 (404)
218 cd00617 Tnase_like Tryptophana 99.8 3.6E-18 7.7E-23 174.6 30.0 336 71-448 33-413 (431)
219 TIGR01329 cysta_beta_ly_E cyst 99.8 7.3E-19 1.6E-23 178.5 24.9 283 98-443 50-375 (378)
220 TIGR02080 O_succ_thio_ly O-suc 99.8 2.1E-18 4.5E-23 175.2 28.0 284 99-442 55-380 (382)
221 PRK07810 O-succinylhomoserine 99.8 3.2E-18 6.9E-23 174.9 29.5 284 99-441 74-402 (403)
222 PRK08064 cystathionine beta-ly 99.8 2E-18 4.4E-23 176.0 27.5 284 99-447 58-386 (390)
223 TIGR03801 asp_4_decarbox aspar 99.8 5.2E-18 1.1E-22 176.3 30.7 329 92-444 130-517 (521)
224 COG0112 GlyA Glycine/serine hy 99.8 1.6E-18 3.5E-23 167.0 24.7 360 40-445 12-392 (413)
225 COG1167 ARO8 Transcriptional r 99.8 8.2E-18 1.8E-22 174.7 31.9 334 68-444 105-456 (459)
226 PRK08354 putative aminotransfe 99.8 1E-17 2.2E-22 166.3 31.1 284 69-440 22-309 (311)
227 PRK15407 lipopolysaccharide bi 99.8 1.2E-17 2.6E-22 172.3 32.8 313 99-442 67-435 (438)
228 PRK05664 threonine-phosphate d 99.8 2.7E-18 5.9E-23 171.7 26.8 271 99-443 53-328 (330)
229 PRK08247 cystathionine gamma-s 99.8 8.1E-19 1.8E-23 177.7 23.3 283 99-443 56-364 (366)
230 PRK08248 O-acetylhomoserine am 99.8 1.1E-17 2.3E-22 172.1 31.7 303 90-445 63-429 (431)
231 PRK07503 methionine gamma-lyas 99.8 3.5E-18 7.7E-23 174.9 27.8 289 99-446 69-399 (403)
232 PLN02509 cystathionine beta-ly 99.8 4.7E-18 1E-22 175.1 28.1 285 96-442 134-460 (464)
233 PRK08574 cystathionine gamma-s 99.8 4.1E-18 8.8E-23 173.2 26.8 288 91-443 53-384 (385)
234 TIGR01365 serC_2 phosphoserine 99.8 1.5E-18 3.2E-23 174.2 22.9 312 88-442 32-372 (374)
235 cd00610 OAT_like Acetyl ornith 99.8 1E-17 2.2E-22 173.1 29.5 341 53-440 34-412 (413)
236 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.5E-17 3.2E-22 169.3 30.1 327 70-441 11-374 (375)
237 PRK05613 O-acetylhomoserine am 99.8 1.2E-17 2.7E-22 171.5 29.5 299 99-443 73-436 (437)
238 PRK08114 cystathionine beta-ly 99.8 3.5E-18 7.7E-23 172.5 24.2 294 89-444 60-394 (395)
239 PRK07812 O-acetylhomoserine am 99.8 1.7E-17 3.7E-22 170.4 29.7 300 99-446 73-434 (436)
240 PRK03244 argD acetylornithine 99.8 3E-17 6.5E-22 168.6 31.6 339 53-445 41-396 (398)
241 PRK07269 cystathionine gamma-s 99.8 2.3E-18 5E-23 173.6 22.7 287 91-442 54-363 (364)
242 PRK06234 methionine gamma-lyas 99.8 3.8E-18 8.2E-23 174.6 24.6 293 90-444 63-398 (400)
243 PRK09257 aromatic amino acid a 99.8 6.8E-18 1.5E-22 173.3 26.3 322 70-440 47-395 (396)
244 PF00464 SHMT: Serine hydroxym 99.8 3.6E-18 7.7E-23 170.7 23.3 324 67-425 31-383 (399)
245 PRK00854 rocD ornithine--oxo-a 99.8 3.8E-17 8.3E-22 168.0 31.6 321 68-441 58-399 (401)
246 PRK06460 hypothetical protein; 99.8 1.5E-17 3.2E-22 168.9 28.0 289 91-444 45-375 (376)
247 TIGR01325 O_suc_HS_sulf O-succ 99.8 5.6E-18 1.2E-22 172.4 24.7 281 99-441 58-380 (380)
248 PRK07582 cystathionine gamma-l 99.8 6.1E-18 1.3E-22 171.1 24.3 281 91-443 51-365 (366)
249 PRK05994 O-acetylhomoserine am 99.8 8.7E-17 1.9E-21 165.6 32.2 293 99-442 67-425 (427)
250 COG1103 Archaea-specific pyrid 99.8 1.5E-17 3.3E-22 151.6 23.2 328 68-443 29-380 (382)
251 PRK06084 O-acetylhomoserine am 99.8 4.2E-17 9.1E-22 167.6 29.4 297 99-444 62-423 (425)
252 PRK05939 hypothetical protein; 99.8 2.4E-17 5.2E-22 168.0 27.1 299 90-442 46-395 (397)
253 TIGR00707 argD acetylornithine 99.8 6.2E-17 1.3E-21 165.3 29.5 320 68-440 44-378 (379)
254 PLN02397 aspartate transaminas 99.8 1.7E-17 3.6E-22 171.4 24.6 320 72-442 71-420 (423)
255 PRK06176 cystathionine gamma-s 99.8 3.6E-17 7.8E-22 166.1 26.4 283 99-443 54-378 (380)
256 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.3E-16 2.9E-21 164.2 30.8 292 99-441 61-417 (418)
257 PRK06702 O-acetylhomoserine am 99.8 1E-16 2.2E-21 163.8 29.4 304 90-446 60-427 (432)
258 PRK07671 cystathionine beta-ly 99.8 7.6E-17 1.6E-21 163.6 28.0 281 99-441 54-376 (377)
259 PRK05967 cystathionine beta-ly 99.8 2.7E-17 5.9E-22 166.2 24.5 287 98-444 67-392 (395)
260 PF02347 GDC-P: Glycine cleava 99.8 3.1E-17 6.7E-22 164.4 24.2 350 31-437 42-429 (429)
261 PRK04073 rocD ornithine--oxo-a 99.8 2.6E-16 5.6E-21 161.5 30.6 321 67-441 56-395 (396)
262 PTZ00125 ornithine aminotransf 99.8 2.6E-16 5.6E-21 161.9 30.4 333 68-446 48-398 (400)
263 PRK04311 selenocysteine syntha 99.8 7.1E-16 1.5E-20 159.0 32.7 322 67-441 97-462 (464)
264 TIGR00461 gcvP glycine dehydro 99.8 1.1E-15 2.3E-20 166.4 35.1 353 31-438 41-426 (939)
265 PRK02627 acetylornithine amino 99.8 3.2E-16 7E-21 160.9 29.3 336 53-443 37-394 (396)
266 KOG1359 Glycine C-acetyltransf 99.8 1.2E-16 2.6E-21 147.3 21.8 327 65-445 79-414 (417)
267 PLN02452 phosphoserine transam 99.8 4E-16 8.8E-21 156.6 27.2 330 65-442 15-362 (365)
268 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 5.3E-17 1.1E-21 163.0 20.1 266 99-402 70-397 (417)
269 KOG0633 Histidinol phosphate a 99.7 2.2E-17 4.9E-22 149.7 14.4 281 119-440 88-374 (375)
270 COG3844 Kynureninase [Amino ac 99.7 1E-15 2.2E-20 143.5 25.8 306 91-444 72-403 (407)
271 PRK01278 argD acetylornithine 99.7 2.3E-15 5.1E-20 154.2 31.2 323 68-443 48-388 (389)
272 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.6E-15 3.5E-20 152.8 28.3 318 87-447 67-430 (450)
273 PRK07049 methionine gamma-lyas 99.7 1.5E-15 3.2E-20 156.4 28.7 294 91-442 83-425 (427)
274 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 1.1E-15 2.5E-20 154.0 27.1 289 91-442 55-386 (386)
275 TIGR00474 selA seryl-tRNA(sec) 99.7 1.9E-15 4.2E-20 155.4 29.2 290 67-400 92-423 (454)
276 TIGR01885 Orn_aminotrans ornit 99.7 2.6E-15 5.7E-20 154.3 29.5 323 68-441 54-400 (401)
277 PRK06434 cystathionine gamma-l 99.7 1.3E-15 2.8E-20 154.0 26.1 285 89-442 62-383 (384)
278 cd01494 AAT_I Aspartate aminot 99.7 9.2E-17 2E-21 144.1 14.9 164 99-291 4-170 (170)
279 KOG2040 Glycine dehydrogenase 99.7 1.5E-15 3.3E-20 153.0 24.5 375 89-498 576-988 (1001)
280 PRK12462 phosphoserine aminotr 99.7 3E-15 6.5E-20 148.8 26.3 327 67-442 14-361 (364)
281 KOG0256 1-aminocyclopropane-1- 99.7 2.7E-15 5.8E-20 144.7 24.4 314 87-442 117-460 (471)
282 PRK02936 argD acetylornithine 99.7 1.6E-14 3.4E-19 147.4 31.0 316 67-440 45-376 (377)
283 KOG1360 5-aminolevulinate synt 99.7 3.6E-15 7.9E-20 142.9 24.1 325 68-445 186-526 (570)
284 PRK15029 arginine decarboxylas 99.7 6.1E-15 1.3E-19 158.4 28.7 228 99-363 209-466 (755)
285 COG2873 MET17 O-acetylhomoseri 99.7 6.3E-15 1.4E-19 140.9 25.3 305 89-442 60-424 (426)
286 TIGR03246 arg_catab_astC succi 99.7 1.9E-14 4E-19 147.7 30.3 324 68-443 52-395 (397)
287 COG0626 MetC Cystathionine bet 99.7 1.4E-14 3E-19 144.4 26.7 290 90-444 62-395 (396)
288 COG0403 GcvP Glycine cleavage 99.7 5.4E-14 1.2E-18 137.1 28.2 357 34-440 54-447 (450)
289 PRK13237 tyrosine phenol-lyase 99.7 3.9E-14 8.5E-19 143.2 28.1 318 87-447 74-437 (460)
290 PRK05093 argD bifunctional N-s 99.7 1.2E-13 2.6E-18 142.1 32.3 325 67-444 56-401 (403)
291 PRK04260 acetylornithine amino 99.7 1.2E-13 2.6E-18 140.7 31.5 315 67-440 44-374 (375)
292 PRK12381 bifunctional succinyl 99.7 4.9E-14 1.1E-18 145.0 28.7 332 68-446 56-402 (406)
293 PLN02624 ornithine-delta-amino 99.7 1.8E-13 4E-18 143.0 33.1 325 67-443 91-444 (474)
294 PRK03715 argD acetylornithine 99.6 1.7E-13 3.8E-18 140.0 29.1 323 68-444 53-394 (395)
295 PRK13578 ornithine decarboxyla 99.6 5.8E-14 1.3E-18 149.4 25.9 305 99-444 178-566 (720)
296 PRK15400 lysine decarboxylase 99.6 6.7E-14 1.5E-18 148.8 25.9 297 99-442 199-558 (714)
297 COG3977 Alanine-alpha-ketoisov 99.6 7.1E-13 1.5E-17 123.1 27.1 366 39-443 16-411 (417)
298 PF01212 Beta_elim_lyase: Beta 99.6 5.8E-16 1.3E-20 150.4 6.6 256 68-369 7-277 (290)
299 PRK15399 lysine decarboxylase 99.6 7.1E-13 1.5E-17 141.1 29.7 296 99-443 199-559 (713)
300 PRK04612 argD acetylornithine 99.6 4.8E-12 1E-16 129.8 32.1 346 53-444 38-404 (408)
301 PRK05964 adenosylmethionine--8 99.6 2.5E-12 5.5E-17 133.0 29.4 353 53-444 40-423 (423)
302 TIGR00713 hemL glutamate-1-sem 99.6 1.7E-12 3.6E-17 134.6 27.4 338 53-443 46-422 (423)
303 PRK12566 glycine dehydrogenase 99.6 3E-12 6.6E-17 138.9 29.7 349 31-437 56-438 (954)
304 PLN02760 4-aminobutyrate:pyruv 99.6 4.9E-12 1.1E-16 132.6 29.8 362 53-450 87-498 (504)
305 KOG0053 Cystathionine beta-lya 99.5 1.5E-12 3.2E-17 128.3 24.0 290 91-444 77-407 (409)
306 COG4992 ArgD Ornithine/acetylo 99.5 7.3E-12 1.6E-16 123.1 28.3 336 53-445 40-400 (404)
307 PF05889 SLA_LP_auto_ag: Solub 99.5 1.5E-12 3.2E-17 127.8 23.3 312 96-442 57-389 (389)
308 KOG2467 Glycine/serine hydroxy 99.5 2.9E-12 6.2E-17 122.1 24.1 343 68-443 52-426 (477)
309 KOG0634 Aromatic amino acid am 99.5 9.1E-12 2E-16 121.5 26.4 320 86-441 95-464 (472)
310 PRK08117 4-aminobutyrate amino 99.5 2.6E-11 5.7E-16 125.8 30.5 345 53-445 41-431 (433)
311 PLN00144 acetylornithine trans 99.5 3.3E-11 7.2E-16 122.8 30.4 331 67-444 31-381 (382)
312 KOG1357 Serine palmitoyltransf 99.5 5.1E-13 1.1E-17 130.5 15.9 302 91-440 178-499 (519)
313 PRK08360 4-aminobutyrate amino 99.5 9.9E-11 2.1E-15 121.3 33.4 330 67-446 57-429 (443)
314 PRK05769 4-aminobutyrate amino 99.5 7E-11 1.5E-15 122.5 31.1 326 67-443 70-439 (441)
315 PRK00062 glutamate-1-semialdeh 99.5 2.2E-11 4.7E-16 126.0 27.0 334 53-444 48-425 (426)
316 PRK08088 4-aminobutyrate amino 99.5 4.7E-11 1E-15 123.6 29.4 329 67-444 57-424 (425)
317 PRK11522 putrescine--2-oxoglut 99.5 1.2E-10 2.5E-15 121.1 31.3 336 67-447 98-455 (459)
318 PRK04013 argD acetylornithine/ 99.5 1.2E-10 2.6E-15 117.3 29.8 302 68-444 41-361 (364)
319 TIGR02407 ectoine_ectB diamino 99.5 2.1E-10 4.5E-15 118.1 32.2 327 67-442 51-411 (412)
320 PRK09221 beta alanine--pyruvat 99.4 7.5E-11 1.6E-15 122.3 28.2 355 53-444 47-444 (445)
321 PRK09264 diaminobutyrate--2-ox 99.4 4.4E-10 9.6E-15 116.2 33.5 344 53-444 37-417 (425)
322 TIGR03372 putres_am_tran putre 99.4 2.2E-10 4.7E-15 118.3 30.4 324 67-441 91-442 (442)
323 PRK13360 omega amino acid--pyr 99.4 4.1E-10 8.9E-15 116.7 32.5 355 53-444 44-441 (442)
324 PRK07678 aminotransferase; Val 99.4 3.3E-10 7.2E-15 117.8 31.7 355 53-444 45-450 (451)
325 PRK07495 4-aminobutyrate amino 99.4 9.3E-10 2E-14 113.6 34.5 347 53-445 38-423 (425)
326 PRK06105 aminotransferase; Pro 99.4 1.7E-10 3.8E-15 120.1 29.2 357 53-446 46-452 (460)
327 PRK09792 4-aminobutyrate trans 99.4 6.2E-10 1.4E-14 114.9 33.1 330 67-442 56-420 (421)
328 TIGR00700 GABAtrnsam 4-aminobu 99.4 1.8E-10 3.8E-15 119.1 28.9 343 53-441 31-418 (420)
329 COG0001 HemL Glutamate-1-semia 99.4 2.6E-10 5.6E-15 113.4 28.0 323 67-446 69-431 (432)
330 PRK06058 4-aminobutyrate amino 99.4 4.7E-10 1E-14 116.6 31.5 329 67-443 72-442 (443)
331 PRK08593 4-aminobutyrate amino 99.4 3.8E-10 8.2E-15 117.2 30.7 345 53-446 40-432 (445)
332 PRK06541 hypothetical protein; 99.4 7.3E-10 1.6E-14 115.4 32.8 355 53-444 50-456 (460)
333 PRK05965 hypothetical protein; 99.4 5.8E-10 1.3E-14 116.2 31.5 358 53-445 44-449 (459)
334 KOG0258 Alanine aminotransfera 99.4 4E-10 8.6E-15 108.6 27.2 316 84-433 106-463 (475)
335 COG1982 LdcC Arginine/lysine/o 99.4 1.3E-10 2.8E-15 119.3 25.1 266 99-402 74-372 (557)
336 TIGR02617 tnaA_trp_ase tryptop 99.4 2.3E-10 5.1E-15 114.6 25.1 340 68-447 55-445 (467)
337 PRK06062 hypothetical protein; 99.4 1.3E-09 2.8E-14 113.4 31.4 342 53-447 51-449 (451)
338 PRK07482 hypothetical protein; 99.4 1.6E-09 3.5E-14 112.9 32.2 355 53-444 48-455 (461)
339 TIGR00508 bioA adenosylmethion 99.4 8.4E-10 1.8E-14 114.0 29.7 347 53-443 43-426 (427)
340 PLN02482 glutamate-1-semialdeh 99.3 1.2E-09 2.7E-14 113.6 29.0 323 67-443 115-473 (474)
341 PRK12403 putative aminotransfe 99.3 2.4E-09 5.2E-14 111.6 31.2 337 68-445 71-454 (460)
342 COG0160 GabT 4-aminobutyrate a 99.3 3.1E-09 6.8E-14 107.7 30.3 342 53-444 54-446 (447)
343 PRK06918 4-aminobutyrate amino 99.3 3.5E-09 7.6E-14 110.4 30.9 345 53-445 52-445 (451)
344 PRK12389 glutamate-1-semialdeh 99.3 3.8E-09 8.2E-14 109.3 30.6 322 67-443 69-427 (428)
345 PRK06777 4-aminobutyrate amino 99.3 5.5E-09 1.2E-13 107.9 31.2 340 53-441 38-419 (421)
346 PRK06082 4-aminobutyrate amino 99.3 1E-08 2.2E-13 106.8 33.0 325 68-444 88-452 (459)
347 PRK05639 4-aminobutyrate amino 99.3 1.6E-08 3.5E-13 105.1 33.8 345 53-446 51-446 (457)
348 PRK07036 hypothetical protein; 99.3 9.5E-09 2.1E-13 107.2 31.3 354 53-444 49-453 (466)
349 PRK07986 adenosylmethionine--8 99.3 4.4E-09 9.6E-14 108.4 28.2 348 53-443 41-423 (428)
350 PRK07481 hypothetical protein; 99.3 2E-08 4.3E-13 104.5 32.7 342 67-444 58-446 (449)
351 PRK00615 glutamate-1-semialdeh 99.3 4.9E-09 1.1E-13 108.1 27.9 339 53-445 51-430 (433)
352 TIGR00709 dat 2,4-diaminobutyr 99.3 2.4E-08 5.2E-13 103.8 33.0 346 53-444 37-436 (442)
353 PRK07046 aminotransferase; Val 99.2 8.3E-09 1.8E-13 107.2 29.3 336 53-444 73-451 (453)
354 TIGR03251 LAT_fam L-lysine 6-t 99.2 6.8E-09 1.5E-13 107.5 28.4 333 67-439 54-430 (431)
355 PRK06173 adenosylmethionine--8 99.2 8.1E-09 1.8E-13 106.6 28.8 350 53-443 42-425 (429)
356 PRK07483 hypothetical protein; 99.2 2.8E-08 6E-13 103.2 32.7 345 67-446 46-440 (443)
357 PRK06943 adenosylmethionine--8 99.2 1.1E-08 2.4E-13 106.3 29.8 354 53-444 52-447 (453)
358 PRK07480 putative aminotransfe 99.2 3E-08 6.4E-13 103.2 32.2 354 53-446 48-451 (456)
359 PRK07030 adenosylmethionine--8 99.2 4.5E-08 9.8E-13 102.1 33.4 354 53-444 45-447 (466)
360 PRK06917 hypothetical protein; 99.2 5E-08 1.1E-12 101.4 32.9 359 53-444 29-438 (447)
361 PRK08297 L-lysine aminotransfe 99.2 1E-08 2.2E-13 106.4 27.7 352 53-444 43-442 (443)
362 PRK06916 adenosylmethionine--8 99.2 2.9E-08 6.3E-13 103.5 31.2 354 53-445 54-457 (460)
363 PRK05630 adenosylmethionine--8 99.2 2.8E-08 6.1E-13 102.5 30.7 336 67-443 56-420 (422)
364 KOG3846 L-kynurenine hydrolase 99.2 2E-09 4.4E-14 100.6 19.8 310 96-445 112-463 (465)
365 PF12897 Aminotran_MocR: Alani 99.2 3E-08 6.5E-13 96.5 28.0 308 99-442 73-414 (425)
366 PRK06938 diaminobutyrate--2-ox 99.2 1.2E-07 2.7E-12 98.8 33.8 345 53-444 61-461 (464)
367 PRK06149 hypothetical protein; 99.2 3.2E-08 7E-13 112.1 31.4 326 68-443 600-970 (972)
368 PRK08742 adenosylmethionine--8 99.2 1.9E-07 4E-12 97.5 34.3 359 53-445 62-469 (472)
369 PRK06209 glutamate-1-semialdeh 99.2 1.9E-08 4.1E-13 104.2 26.2 335 53-444 46-406 (431)
370 PRK06931 diaminobutyrate--2-ox 99.1 2.1E-07 4.5E-12 97.0 33.2 347 53-445 56-456 (459)
371 COG1448 TyrB Aspartate/tyrosin 99.1 1.5E-08 3.3E-13 98.3 22.7 291 107-440 82-395 (396)
372 TIGR00699 GABAtrns_euk 4-amino 99.1 7.5E-08 1.6E-12 99.8 29.6 333 67-441 74-464 (464)
373 KOG1358 Serine palmitoyltransf 99.1 3.2E-08 6.9E-13 95.8 24.4 346 52-443 91-465 (467)
374 PRK06148 hypothetical protein; 99.1 5.4E-08 1.2E-12 110.4 29.9 329 68-444 639-1011(1013)
375 COG0161 BioA Adenosylmethionin 99.1 5.8E-08 1.3E-12 98.0 25.2 341 67-445 60-445 (449)
376 COG1932 SerC Phosphoserine ami 99.1 2.3E-07 5.1E-12 89.8 27.2 303 92-443 47-363 (365)
377 KOG1402 Ornithine aminotransfe 99.0 2E-07 4.4E-12 88.4 25.2 325 69-441 77-425 (427)
378 COG1921 SelA Selenocysteine sy 99.0 1.1E-08 2.3E-13 100.9 17.0 223 68-337 39-271 (395)
379 COG3033 TnaA Tryptophanase [Am 99.0 2E-07 4.3E-12 89.4 22.9 312 99-443 83-444 (471)
380 KOG1401 Acetylornithine aminot 98.8 1.8E-06 3.9E-11 84.6 23.8 339 67-445 72-432 (433)
381 KOG1404 Alanine-glyoxylate ami 98.8 8E-07 1.7E-11 86.4 18.7 322 68-437 67-432 (442)
382 PF06838 Met_gamma_lyase: Meth 98.7 1.3E-06 2.8E-11 84.8 18.9 256 98-397 57-332 (403)
383 PLN02974 adenosylmethionine-8- 98.7 3.5E-05 7.5E-10 85.0 32.0 339 69-441 384-816 (817)
384 PF03841 SelA: L-seryl-tRNA se 98.7 1.8E-08 3.9E-13 98.6 5.7 162 99-291 51-226 (367)
385 PF00202 Aminotran_3: Aminotra 98.6 9.8E-06 2.1E-10 81.3 21.6 256 67-359 32-314 (339)
386 KOG0630 Predicted pyridoxal-de 98.5 2E-06 4.4E-11 85.4 14.6 196 154-369 231-441 (838)
387 KOG2040 Glycine dehydrogenase 98.5 2.1E-05 4.7E-10 80.9 21.3 347 34-438 97-478 (1001)
388 KOG3843 Predicted serine hydro 98.4 1.1E-06 2.4E-11 80.9 8.2 234 94-360 56-295 (432)
389 KOG2790 Phosphoserine aminotra 98.4 0.0001 2.2E-09 69.0 20.7 334 68-442 19-367 (370)
390 PF04864 Alliinase_C: Allinase 98.2 6.3E-05 1.4E-09 72.8 16.9 298 90-438 42-360 (363)
391 KOG1412 Aspartate aminotransfe 98.1 0.0013 2.8E-08 62.5 22.3 289 107-445 87-407 (410)
392 COG4100 Cystathionine beta-lya 97.9 0.00012 2.6E-09 69.0 10.7 149 102-279 72-235 (416)
393 KOG1403 Predicted alanine-glyo 97.6 0.0052 1.1E-07 58.2 17.1 290 118-446 103-440 (452)
394 KOG1411 Aspartate aminotransfe 97.6 0.0015 3.3E-08 62.9 13.1 274 120-441 123-423 (427)
395 KOG1405 4-aminobutyrate aminot 97.5 0.0084 1.8E-07 58.2 16.7 212 192-443 255-483 (484)
396 PLN02994 1-aminocyclopropane-1 95.8 0.075 1.6E-06 46.6 9.2 63 87-165 88-152 (153)
397 COG0031 CysK Cysteine synthase 65.1 16 0.00035 35.7 6.0 83 120-214 65-148 (300)
398 COG1954 GlpP Glycerol-3-phosph 63.9 11 0.00024 33.3 4.2 50 191-249 12-61 (181)
399 PRK11633 cell division protein 59.6 22 0.00048 33.2 5.7 53 386-440 161-213 (226)
400 cd01455 vWA_F11C1-5a_type Von 56.3 21 0.00045 32.4 4.8 37 203-245 113-149 (191)
401 cd06927 RNAP_L L subunit of Ar 50.4 1.2E+02 0.0025 23.5 8.4 75 365-444 2-78 (83)
402 PRK14994 SAM-dependent 16S rib 47.8 1.3E+02 0.0028 29.4 9.1 86 155-249 39-125 (287)
403 PF02603 Hpr_kinase_N: HPr Ser 45.2 26 0.00056 29.5 3.5 45 189-245 64-112 (127)
404 PF02310 B12-binding: B12 bind 43.2 1.6E+02 0.0035 23.8 8.1 73 166-249 19-92 (121)
405 PLN02672 methionine S-methyltr 42.4 5.3E+02 0.012 30.3 14.2 150 74-245 408-564 (1082)
406 PF13407 Peripla_BP_4: Peripla 40.8 1.8E+02 0.0039 27.0 9.1 65 167-243 20-85 (257)
407 cd01018 ZntC Metal binding pro 39.6 3.4E+02 0.0075 25.9 11.3 66 163-243 176-245 (266)
408 COG0296 GlgB 1,4-alpha-glucan 37.9 26 0.00057 37.9 2.9 40 206-251 201-240 (628)
409 cd07027 RNAP_RPB11_like RPB11 35.7 2.1E+02 0.0045 22.1 8.5 75 365-444 2-78 (83)
410 KOG3974 Predicted sugar kinase 35.2 86 0.0019 29.9 5.4 23 218-246 118-140 (306)
411 PRK01146 DNA-directed RNA poly 34.7 2.2E+02 0.0047 22.1 8.7 76 364-444 3-80 (85)
412 cd01020 TroA_b Metal binding p 34.6 4.1E+02 0.009 25.3 11.0 74 156-241 155-235 (264)
413 cd06535 CIDE_N_CAD CIDE_N doma 34.0 1.4E+02 0.0031 22.7 5.4 58 158-216 18-77 (77)
414 KOG4392 RNA polymerase, subuni 33.8 1.1E+02 0.0024 25.0 5.0 80 372-453 27-107 (117)
415 COG3147 DedD Uncharacterized p 33.6 1.2E+02 0.0027 27.9 5.9 52 387-440 164-215 (226)
416 COG2870 RfaE ADP-heptose synth 33.6 89 0.0019 31.8 5.5 79 158-245 95-178 (467)
417 cd01615 CIDE_N CIDE_N domain, 33.3 1.6E+02 0.0034 22.6 5.6 56 158-213 18-75 (78)
418 COG1105 FruK Fructose-1-phosph 33.1 2.7E+02 0.0058 27.5 8.7 55 188-248 109-169 (310)
419 PF04309 G3P_antiterm: Glycero 32.1 10 0.00022 33.9 -1.1 47 194-249 11-57 (175)
420 COG2515 Acd 1-aminocyclopropan 31.0 4.8E+02 0.011 25.6 9.8 115 119-248 65-190 (323)
421 TIGR02026 BchE magnesium-proto 30.3 2.3E+02 0.0051 30.0 8.6 71 171-250 32-104 (497)
422 cd00758 MoCF_BD MoCF_BD: molyb 30.3 2.5E+02 0.0054 23.6 7.2 60 161-225 18-80 (133)
423 PLN02556 cysteine synthase/L-3 30.3 1.3E+02 0.0029 30.5 6.4 82 120-214 114-195 (368)
424 cd00886 MogA_MoaB MogA_MoaB fa 30.2 2.2E+02 0.0048 24.6 7.1 57 164-225 22-83 (152)
425 TIGR03573 WbuX N-acetyl sugar 29.8 5.6E+02 0.012 25.6 10.8 104 119-249 62-171 (343)
426 PLN03013 cysteine synthase 29.8 1.7E+02 0.0036 30.4 7.0 75 120-207 178-252 (429)
427 COG2099 CobK Precorrin-6x redu 29.8 1.3E+02 0.0027 28.7 5.6 27 216-248 50-76 (257)
428 TIGR00288 conserved hypothetic 29.1 3.3E+02 0.007 24.0 7.7 73 156-245 60-136 (160)
429 TIGR01319 glmL_fam conserved h 29.0 2.3E+02 0.0049 29.6 7.7 77 160-245 82-158 (463)
430 PF00403 HMA: Heavy-metal-asso 27.7 2.2E+02 0.0047 19.9 6.2 52 348-400 10-61 (62)
431 KOG1467 Translation initiation 26.6 5.6E+02 0.012 26.9 9.8 105 119-249 361-472 (556)
432 COG1504 Uncharacterized conser 26.4 1.5E+02 0.0032 24.3 4.6 48 188-243 47-94 (121)
433 cd01422 MGS Methylglyoxal synt 26.1 3.7E+02 0.008 22.0 8.4 76 156-243 29-106 (115)
434 PRK00685 metal-dependent hydro 26.0 5.1E+02 0.011 23.6 9.7 75 156-231 136-213 (228)
435 TIGR00177 molyb_syn molybdenum 25.2 3.6E+02 0.0078 23.0 7.4 58 163-225 28-88 (144)
436 smart00852 MoCF_biosynth Proba 25.0 3.6E+02 0.0077 22.5 7.3 60 161-225 17-79 (135)
437 PF12146 Hydrolase_4: Putative 24.4 1.5E+02 0.0032 22.5 4.3 47 388-441 32-78 (79)
438 KOG0369 Pyruvate carboxylase [ 23.5 85 0.0018 34.0 3.6 34 211-251 164-197 (1176)
439 smart00266 CAD Domains present 23.4 2.6E+02 0.0057 21.1 5.2 55 158-212 16-72 (74)
440 TIGR02667 moaB_proteo molybden 22.8 3.1E+02 0.0067 24.1 6.7 63 162-228 22-89 (163)
441 PF02110 HK: Hydroxyethylthiaz 22.7 5.6E+02 0.012 24.4 8.6 82 154-250 8-91 (246)
442 PF14606 Lipase_GDSL_3: GDSL-l 22.5 4.7E+02 0.01 23.5 7.7 45 168-213 26-70 (178)
443 PRK05234 mgsA methylglyoxal sy 22.4 5E+02 0.011 22.3 8.3 79 156-248 34-116 (142)
444 cd06305 PBP1_methylthioribose_ 21.4 3.8E+02 0.0082 25.0 7.6 68 166-245 20-88 (273)
445 PRK08057 cobalt-precorrin-6x r 21.3 2.4E+02 0.0052 26.8 6.0 28 215-248 48-75 (248)
446 cd01017 AdcA Metal binding pro 21.3 7.3E+02 0.016 23.8 13.8 63 163-231 177-242 (282)
447 COG3453 Uncharacterized protei 20.8 5.1E+02 0.011 21.7 6.8 70 160-231 43-125 (130)
448 cd06536 CIDE_N_ICAD CIDE_N dom 20.0 3.6E+02 0.0078 20.7 5.4 56 158-213 18-77 (80)
No 1
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-64 Score=489.64 Aligned_cols=423 Identities=48% Similarity=0.751 Sum_probs=389.5
Q ss_pred CCcccccccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhcc-CCCCC
Q 010897 9 DSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINK-NYVDM 87 (498)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~-n~~~~ 87 (498)
+.+....+.+.+++-++.++.+.+|++|.+.+++++.+++++++++||+.+..+|+.++.+++..+++.+++++ |+.++
T Consensus 33 ~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~N~l~~ 112 (491)
T KOG1383|consen 33 NKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKFNPLHP 112 (491)
T ss_pred hhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhcCccCc
Confidence 44555677889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHH
Q 010897 88 DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (498)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~ 167 (498)
+.+|+...++++|++|++.||+.+.+ .+|..|+|+||++++ +...|+..++.+ +++.+|+|+++...|.+|
T Consensus 113 d~fp~~~~~e~~~Vnm~~~L~~~~~~----~~g~~t~G~Ses~l~----~~k~~~~~r~~~-k~I~~p~iv~~~~v~~a~ 183 (491)
T KOG1383|consen 113 DEFPVVRKLEAECVNMIANLFNAPSD----SCGCGTVGGSESGLA----AKKSYRNRRKAQ-KGIDKPNIVTPQNVHAAF 183 (491)
T ss_pred cccchhHHHHHHHHHHHHHHhcCCcc----ccCccccccchHHHH----HHHHHHHHHHhc-cCCCCccccchHHHHHHH
Confidence 99999999999999999999999953 569999999999544 445566666655 677899999999999999
Q ss_pred HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHH-hhcccCCCceEEEecC
Q 010897 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAA 246 (498)
Q Consensus 168 ~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~-~~~~~~~~~~l~vD~A 246 (498)
++++++++++++.||+++++|++|+.++.+.+++||++|+.+.|++|+|.++|+++|.+++.+ + ++++|||++
T Consensus 184 eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w------~ipiHvDa~ 257 (491)
T KOG1383|consen 184 EKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW------DIPIHVDAC 257 (491)
T ss_pred HHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh------CCceeeccc
Confidence 999999999999999998789999999999999999999999999999999999999999999 8 999999999
Q ss_pred ccccccc-ccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHH
Q 010897 247 SGGFIAP-FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQI 325 (498)
Q Consensus 247 ~~g~~~~-~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~ 325 (498)
.|||+.| +..++.+|||+.+++.|+++++|||+++|.|++|+++|++++++.++.++.+|+|+.+.++|++|||++.++
T Consensus 258 ~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 258 LGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQV 337 (491)
T ss_pred CccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHH
Confidence 9999998 566677999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeee
Q 010897 326 IAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAY 405 (498)
Q Consensus 326 ~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~ 405 (498)
+++|+++..+|.+||++.++++.+.++.|++.|++++++.++++| .|+|.+.+.+..|.+++.+.|++.||+++++
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp----~vs~~~~~s~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP----LVSFILFGSNDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC----cEEEEEccCCccchhhhhHHHHhcCcCcccc
Confidence 999999999999999999999999999999999999999999774 4566665566789999999999999999999
Q ss_pred cCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCcccccccc
Q 010897 406 TMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKT 455 (498)
Q Consensus 406 ~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~~~~~~ 455 (498)
++|. +.+..++|+.++. +-.++|+.||++++++++..+.+...+.
T Consensus 414 q~P~-a~Hi~vt~~~~~~----~~A~~~v~Di~~~~~el~~~p~~~~~~~ 458 (491)
T KOG1383|consen 414 QFPA-AIHICVTRVHARE----DVADRFVADIRKVVEELKSLPESKTHGM 458 (491)
T ss_pred CCCC-ceEEEEEeeeccH----HHHHHHHHHHHHHHHHHHhCCCcccCcc
Confidence 9997 6788888988874 3479999999999999999998887663
No 2
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=3.2e-60 Score=483.86 Aligned_cols=428 Identities=63% Similarity=1.112 Sum_probs=374.8
Q ss_pred ccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHH
Q 010897 16 STFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTE 95 (498)
Q Consensus 16 ~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~ 95 (498)
+.||++.+.+.++...+|++|.+.+++++.+.+.+.++.+.+-++++|+++++.|++.++|..+++.|+.+|..+|..++
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~ 80 (431)
T TIGR01788 1 SAYGSRAVSTGIPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEYPQTAE 80 (431)
T ss_pred CCccccccccCCCcccCCCCCCCHHHHHHHHHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccCccHHH
Confidence 35899999999999999999999999999999988887655545699999999999999999999999888888898889
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcC
Q 010897 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (498)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g 175 (498)
+|+++++|+++++|++.+. +...+++|+||||||++|+++++.++..+.+..|....++.||+|+.+|+||.++++++|
T Consensus 81 le~~~~~~la~llg~~~~~-~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg 159 (431)
T TIGR01788 81 IENRCVNMLADLWHAPAKD-AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFD 159 (431)
T ss_pred HHHHHHHHHHHHhCCCCCC-CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcC
Confidence 9999999999999998320 124577799999999999999876544333333433335689999999999999999999
Q ss_pred CeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 176 VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 176 ~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
++++.||++++++.+|+++|+++|+++|++|+++++||.||.++|+++|+++|++++.-++.++|+|||+||+|+++||.
T Consensus 160 ~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~ 239 (431)
T TIGR01788 160 VELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV 239 (431)
T ss_pred ceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHh
Confidence 99999999875478999999999999999999999999999999999999999998433444699999999999999988
Q ss_pred CCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh
Q 010897 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (498)
Q Consensus 256 ~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l 335 (498)
.++.+++|..+++||+++|+|||+++|.|+|++++|+++.+...+...++|+++....++++++|++..+++.|+.|+.+
T Consensus 240 ~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~l 319 (431)
T TIGR01788 240 YPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRL 319 (431)
T ss_pred CCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHh
Confidence 88888888889999999999999999999999999987666566666788998765567889999887889999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCC--CCCHHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 336 GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 336 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~--~~~~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
|.+||+++++++.+++++|.+.|+++|+|+++.+.+..++|||++++.. ..+..++.++|.++||.+..+..|....+
T Consensus 320 G~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~ 399 (431)
T TIGR01788 320 GREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAED 399 (431)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCC
Confidence 9999999999999999999999999999999976337999999997532 35678999999999999888888877788
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
..++|++++++++++.+++|+++|+.++..+
T Consensus 400 ~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 400 IVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998765
No 3
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-58 Score=471.95 Aligned_cols=367 Identities=40% Similarity=0.642 Sum_probs=330.3
Q ss_pred CCCCCCCCHHHHHHHHHHh-----hhccCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDE-----LMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIA 105 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la 105 (498)
.+|+.+.+.++++..+... ...++||+++.++++++++++.+.+++...+++|..+|+.+|+.+++|+++++|++
T Consensus 32 ~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~ 111 (460)
T COG0076 32 MAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLS 111 (460)
T ss_pred cCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHH
Confidence 5566666666666666554 33467999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh-cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec
Q 010897 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE-QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (498)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~-~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~ 184 (498)
+++|++. ...|++|+||||||++|+++++++|.....+ .+...+.|+||+|..+|+|+.|+|+++|++++.|++.
T Consensus 112 ~l~~~~~----~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~ 187 (460)
T COG0076 112 DLLGAPE----EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTV 187 (460)
T ss_pred HHhCCCC----CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEec
Confidence 9999984 3679999999999999999999999765544 4555567899999999999999999999999999998
Q ss_pred CCccccCHHHHHHHhhhCCeE--EEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc
Q 010897 185 EGYYVMNPVKAVELVDENTIC--VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~--v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~ 262 (498)
+++++||+++|+++|+++|.. |+.+.|||++|.+||+++|+++|+++ ++|+|||+|+||+++||..+...|+
T Consensus 188 ~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~------~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 188 PTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY------GIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred cCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc------CCcEEEEccccceeecccCccchhh
Confidence 756999999999999999988 99999999999999999999999999 9999999999999999999988899
Q ss_pred cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCC-CCCCccccCCCchHHHHHHHHHHHHhcHHHHH
Q 010897 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYK 341 (498)
Q Consensus 263 ~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~-~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~ 341 (498)
|+++++|||++|+||||++|+|||++++|+++.+++...+...|+.+ ...++++.+||++..++++|+.++.+|.+||+
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~ 341 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYR 341 (460)
T ss_pred cCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHH
Confidence 99999999999999999999999999999998888888888888887 66789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCC
Q 010897 342 NIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPA 409 (498)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~ 409 (498)
++++++.+++++|.++|++.|.|+++.++ .+++|+|++++... ...+..+.+.+.||.++.+..+.
T Consensus 342 ~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~~V~fr~~~~~~-~~~~~~~~~~~~gw~v~~~~~~~ 407 (460)
T COG0076 342 KLLDRTLELARYLAEELEKLGDFELVNEP-ELPIVAFRLKDDED-TLADLSERLDRRGWQVPAQLLPK 407 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccceEEEEcCCccc-chhchHHHHHhcCceeecccCCc
Confidence 99999999999999999999989999887 79999999954322 25677888899999998776553
No 4
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=4.1e-56 Score=461.33 Aligned_cols=414 Identities=17% Similarity=0.195 Sum_probs=342.8
Q ss_pred cccccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhh----ccCCCCCcccccccCCChH--HHHHHHHHHhccCCCC
Q 010897 13 ILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVD 86 (498)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~--~~~~~l~~~~~~n~~~ 86 (498)
-+.+...++++++.++. ++|++|.+++++++++.+.+. .++||+| ++|++.++.+ .+.|++..++|.+...
T Consensus 85 pv~~~~~p~~l~~~l~~-~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f--~a~~~~~~~~~~~lgd~l~sa~n~~~~~ 161 (539)
T PLN02590 85 PVLSQVQPGYLRDMLPD-SAPERPESLKELLDDVSKKIMPGITHWQSPSY--FAYYASSTSVAGFLGEMLNAGLSVVGFT 161 (539)
T ss_pred CCCCCCChHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe--eEeccCCCcHHHHHHHHHHHhcccccCC
Confidence 35556777999999987 899999999999999988765 3578987 8888877643 5899999999999999
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h 164 (498)
|..+|..+++|+++++|+++++|+|..+- ....|++++|||+||++|++++|+++.......+ ..+..|++|+.+|
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~--~~~~vvy~S~~aH 239 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL--LPQLVVYGSDQTH 239 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC--CCCEEEEecCCch
Confidence 99999999999999999999999996421 1246999999999999999999987653321112 1245888999999
Q ss_pred hHHHHHHHHcCCe---eEEEEecC-CccccCHHHHHHHhhhC------CeEEEEeeccCCcccccCHHHHHHHHHHhhcc
Q 010897 165 VCWEKFARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (498)
Q Consensus 165 ~~~~~~~~~~g~~---~~~v~~~~-~~~~~d~~~L~~~i~~~------t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~ 234 (498)
+|+.|+|+++|+. ++.||++. ++++||+++|+++|.++ |.+|+++.|+|.+|.+||+++|+++|+++
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~--- 316 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY--- 316 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh---
Confidence 9999999999995 89999984 35899999999999652 78999999999999999999999999999
Q ss_pred cCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC---
Q 010897 235 TGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--- 310 (498)
Q Consensus 235 ~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~--- 310 (498)
++|+||||||||+++ ++|+.+.. .+++.+||+++++||||++|++||++++|++..+...+...+.|+...
T Consensus 317 ---g~WlHVDaA~GG~al--~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 317 ---GIWLHVDAAYAGNAC--ICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred ---CCeEEEecchhhhhh--cChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999875 56666543 378999999999999999999999999999876666666777888432
Q ss_pred ------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCC
Q 010897 311 ------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS 384 (498)
Q Consensus 311 ------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (498)
...+++++||. +.++++|++|+.+|.+||+++++++.+++++|.+.|++.++|+++.++ .+++|||++.++.
T Consensus 392 ~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~-~l~iVcFr~~~~~ 469 (539)
T PLN02590 392 KDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR-YFSLVCFRLAPVD 469 (539)
T ss_pred cccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceEEEEEEecCCC
Confidence 23467888987 689999999999999999999999999999999999999999999886 7999999997531
Q ss_pred C----CC--HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCC-CCHHHHHHHHHHHHHHHHHH
Q 010897 385 A----HT--VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRED-FSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 385 ~----~~--~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~-~t~~~~~~l~~~l~~~l~~l 444 (498)
. .| ..+|.++|.+.|.+... ++...+..+||+++..+ +++++++.+++.|.+...++
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~~vs---~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKIFIS---HTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEE---eeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 11 24788888889987544 34467889999999764 55677777777776665544
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=9.8e-53 Score=436.62 Aligned_cols=413 Identities=16% Similarity=0.226 Sum_probs=335.8
Q ss_pred ccccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhc----cCCCCCcccccccCCCh--HHHHHHHHHHhccCCCCC
Q 010897 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWME--PECDKLVMASINKNYVDM 87 (498)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~--~~~~~~l~~~~~~n~~~~ 87 (498)
+.+...+++++..++. .+|+++.+.+++++.+.+.+.. ++||+| ++|+++++. ..+.+++..++|.+...|
T Consensus 38 v~~~~~p~~l~~~~~~-~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f--~~~~~~~~~~~~~lad~l~~~~n~~~~~~ 114 (490)
T PLN02880 38 VLSQVQPGYLRELLPD-SAPNQPETLDQVLDDVQAKILPGVTHWQSPNY--FAYYPSNSSVAGFLGEMLSAGLNIVGFSW 114 (490)
T ss_pred CCCCCCHHHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeccCCCcHHHHHHHHHHHhhccCCccc
Confidence 5556677888888887 7899999999999999887652 478987 777776654 358899999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHcCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh
Q 010897 88 DEYPVTTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (498)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~ 165 (498)
+.+|..+++|+++.+|+++++|+|..+. ....|++|+|||+||++|++++|+++.......+ ..+..|++|+.+|+
T Consensus 115 ~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--~~~~vv~~S~~aH~ 192 (490)
T PLN02880 115 ITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--LEKLVVYASDQTHS 192 (490)
T ss_pred ccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--cCCeEEEEcCCchH
Confidence 9999999999999999999999996421 1135899999999999999999987543321111 12458889999999
Q ss_pred HHHHHHHHcCCe---eEEEEecC-CccccCHHHHHHHhhhC------CeEEEEeeccCCcccccCHHHHHHHHHHhhccc
Q 010897 166 CWEKFARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (498)
Q Consensus 166 ~~~~~~~~~g~~---~~~v~~~~-~~~~~d~~~L~~~i~~~------t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~ 235 (498)
|+.|+|+++|++ ++.||+++ ++++||+++|+++|.++ |.+|+++.|+|.+|.+||+++|+++|+++
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~---- 268 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN---- 268 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc----
Confidence 999999999996 89999974 45899999999999742 68899999999999999999999999999
Q ss_pred CCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC----
Q 010897 236 GWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD---- 310 (498)
Q Consensus 236 ~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~---- 310 (498)
|+|+|||||||++++ ..++.+..+ +++.+||+++++|||+++|.+||++++|++..+...+.....|+...
T Consensus 269 --~iwlHVDaA~gg~~~--~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~ 344 (490)
T PLN02880 269 --GMWFHVDAAYAGSAC--ICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQA 344 (490)
T ss_pred --CCEEEEehhhHHHHH--hCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccc
Confidence 999999999999864 455555444 56789999999999999999999999998665555555666777542
Q ss_pred -----CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCC
Q 010897 311 -----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA 385 (498)
Q Consensus 311 -----~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~ 385 (498)
...++++.+|. +..+++|+.|+.+|.+||+++++++.++++++.+.|++.++|+++.++ ..++|||++++. .
T Consensus 345 ~~~~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~-~ 421 (490)
T PLN02880 345 NSVVDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPP-K 421 (490)
T ss_pred cCCCChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCC-C
Confidence 12345656665 578999999999999999999999999999999999999999999876 699999999753 1
Q ss_pred CCH-------HHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCC-HHHHHHHHHHHHHHHHHHH
Q 010897 386 HTV-------FEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFS-RSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 386 ~~~-------~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t-~~~~~~l~~~l~~~l~~l~ 445 (498)
.+. .++.++|.+.|.+.... +...+..++|+++..+.| .++++.+++.|+++.+++.
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~---t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISH---TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEE---EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 221 46777888888875443 335678899999987655 5889988888888776653
No 6
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=5.1e-53 Score=425.05 Aligned_cols=348 Identities=28% Similarity=0.406 Sum_probs=293.0
Q ss_pred chHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhc----cCCCCCcccccccCCChH--HHHHHHHHHhccCCCCCcCCcch
Q 010897 20 SRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVDMDEYPVT 93 (498)
Q Consensus 20 ~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~--~~~~~l~~~~~~n~~~~~~~~~~ 93 (498)
|+++++.++. .+|++|.+.+++++++++.+.. +++|+| .+|+++++.+ .+.+++..++|.|...++.+|..
T Consensus 1 P~~l~~~~~~-~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~--~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~ 77 (373)
T PF00282_consen 1 PGELRARLDE-ELPEEGESLEEVLKDLREILAPGVTHWHHPRF--FGFVPGGPSPASILADLLASALNQNGFTWEASPAA 77 (373)
T ss_dssp TTSSGGGCHC-CHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTB--ESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHH
T ss_pred ChhhhhcCcc-ccccCCCCHHHHHHHHHHHhhccCCCCCChhH--hhhccCCccHHHHHHHHHHhhhccccccccccccc
Confidence 4566777766 9999999999999999887653 457886 7888766644 48899999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEEcCCchhHHHHH
Q 010897 94 TELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~-~~~~~Iv~s~~~h~~~~~~ 170 (498)
+++|+++.+|+++++|+|..+. ....|++|+|||+||++|++++|+++.+..+..|.. ..+++|++|+.+|+|+.|+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 9999999999999999994321 136799999999999999999999988777767755 5578999999999999999
Q ss_pred HHHcCCeeEEEEecCCccccCHHHHHHHhhh---C---CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 171 ~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~---t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
|+++|++++.||++++ ++||+++|+++|.+ + +.+|+++.|+|.+|.+||+++|.++|+++ ++|+|||
T Consensus 158 a~~lGlg~~~I~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~------~~wlHVD 230 (373)
T PF00282_consen 158 ARILGLGVRKIPTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY------NIWLHVD 230 (373)
T ss_dssp HHHTTSEEEEE-BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC------T-EEEEE
T ss_pred cceeeeEEEEecCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc------ceeeeec
Confidence 9999999999999985 89999999999864 2 55899999999999999999999999999 9999999
Q ss_pred cCcccccccccCCCCc-cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCC---------CCc
Q 010897 245 AASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTF 314 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~-~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~---------~~~ 314 (498)
|||||+++ +.|..+ .+++++.+|||++|+||||++|++||++++|++..+...+..++.|+.... ..+
T Consensus 231 aA~gg~~~--~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~ 308 (373)
T PF00282_consen 231 AAYGGSAL--LSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY 308 (373)
T ss_dssp ETTGGGGG--GHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred cccccccc--ccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence 99999653 455554 455889999999999999999999999999998887777777889998432 346
Q ss_pred cccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec
Q 010897 315 TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (498)
Q Consensus 315 ~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (498)
++++|| ...++++|+.|+.+|.+||++++++..+++++|.+.|++.++|+++.++ ..++|||+++
T Consensus 309 tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~-~~~~vcFr~k 373 (373)
T PF00282_consen 309 TLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP-DLNIVCFRYK 373 (373)
T ss_dssp SSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT-SSSEEEEEES
T ss_pred cccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC-CceEEEEEeC
Confidence 788999 6899999999999999999999999999999999999999999999876 7999999984
No 7
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1.7e-48 Score=405.43 Aligned_cols=401 Identities=19% Similarity=0.282 Sum_probs=312.6
Q ss_pred HHHhhCCCCCCCCCCCCHHHHHHHHHHhhh----ccCCCCCcccccccCCChHH---HHHHHHHHhccCCCCCcCCcchH
Q 010897 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEPE---CDKLVMASINKNYVDMDEYPVTT 94 (498)
Q Consensus 22 ~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~---~~~~l~~~~~~n~~~~~~~~~~~ 94 (498)
.++..++...+|+.+.+.+++++.+.+.+. .++||+| .+|++...++. +.+ +..++|+|...|+.+|..+
T Consensus 52 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f--~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t 128 (522)
T TIGR03799 52 EIEKDFSSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSF--IGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFT 128 (522)
T ss_pred hhhhcccccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCe--EEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchH
Confidence 344466677899999999999999876654 3578987 77777653332 456 6678999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCC--------CCCCcceeeecChhHHHHHHHHHHHHHHHHHH------HhcCCC-------CC
Q 010897 95 ELQNRCVNMIAHLFNTPVA--------DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR------KEQGKP-------YD 153 (498)
Q Consensus 95 ~le~~~~~~la~l~g~~~~--------~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~------~~~g~~-------~~ 153 (498)
++|+++.+|++++++.+++ ..+...|++|+|||+||++|++++|++..... +.+|.. ..
T Consensus 129 ~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~ 208 (522)
T TIGR03799 129 PLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYD 208 (522)
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCC
Confidence 9999999999999963221 11235699999999999999999998754321 112221 23
Q ss_pred CcEEEEcCCchhHHHHHHHHcCC---eeEEEEecCCccccCHHHHHHHhhh----C--CeEEEEeeccCCcccccCHHHH
Q 010897 154 KPNIVTGANVQVCWEKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE----N--TICVAAILGSTLTGEFEDVKLL 224 (498)
Q Consensus 154 ~~~Iv~s~~~h~~~~~~~~~~g~---~~~~v~~~~~~~~~d~~~L~~~i~~----~--t~~v~~~~~~t~tG~~~~l~~I 224 (498)
+++||+|+.+|+|+.|+++++|+ .++.||++++ ++||+++|+++|.+ + +.+|+.+.|+|.||.+||+++|
T Consensus 209 ~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 209 GLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred ceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 56899999999999999999999 6999999875 89999999999963 3 5667778999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
+++|+++ ++|+|||+|||++.+ ..++.++.+ +++++||+++|+|||+++|.|||++++|++..+ +.+...
T Consensus 288 a~i~~~~------g~~lHVDaA~gg~~~--~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~ 358 (522)
T TIGR03799 288 ADIAQEL------GCHFHVDAAWGGATL--LSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHH 358 (522)
T ss_pred HHHHHHc------CCeEEEEchhhhHHH--hCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccC
Confidence 9999999 999999999998754 455555555 467899999999999999999999999987543 445556
Q ss_pred cCccCC----CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEE
Q 010897 304 INYLGS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (498)
Q Consensus 304 ~~yl~~----~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (498)
+.|+.. +...+++++||++ .++++|++|+.+|.+||++++++..+++++|.+.|++.++|+++.++ ..++|||+
T Consensus 359 ~~Yl~~~~~~d~~~~~legsR~~-~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p-~l~iv~Fr 436 (522)
T TIGR03799 359 AEYILRKGSKDLGSHTLEGSRPG-MAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP-ELCLLTYR 436 (522)
T ss_pred cchhcCCCCCccccceeecCcch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC-CccEEEEE
Confidence 677632 2235678899985 46789999999999999999999999999999999999999999876 68999999
Q ss_pred ecCCCC------------------CC--HHHHHHHHHhcCcEeeeecC--CCCCC--CeeEEEEeecCCCCHHHHHHHHH
Q 010897 380 LKDSSA------------------HT--VFEISEGLRKFGWIVPAYTM--PANAE--NVAVLRVVVREDFSRSLVERLIS 435 (498)
Q Consensus 380 ~~~~~~------------------~~--~~~l~~~L~~~G~~v~~~~~--~~~~~--~~~~lRv~v~~~~t~~~~~~l~~ 435 (498)
+.+... .| ...+.++|++.|......+. +..+. +..+||+++.++.|.+ +
T Consensus 437 ~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~------~ 510 (522)
T TIGR03799 437 YVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTH------E 510 (522)
T ss_pred EeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCH------H
Confidence 864310 01 14677788889987655442 22232 3478999998765543 4
Q ss_pred HHHHHHHH
Q 010897 436 HIEEVLKE 443 (498)
Q Consensus 436 ~l~~~l~~ 443 (498)
+|+.++++
T Consensus 511 ~i~~~l~~ 518 (522)
T TIGR03799 511 ILQDILDE 518 (522)
T ss_pred HHHHHHHH
Confidence 45555544
No 8
>PLN02263 serine decarboxylase
Probab=100.00 E-value=6.9e-47 Score=382.64 Aligned_cols=356 Identities=18% Similarity=0.219 Sum_probs=287.1
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCC---hHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWM---EPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPV 112 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~ 112 (498)
.+.+++.+.+.+... ..+ +.+| |... ...+.+++...+|.-...+..++ .+.++|+++.+|+++++|+|.
T Consensus 75 ~~~~l~~~~~~~~~~-~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~ 150 (470)
T PLN02263 75 MASVLARYRKTLVER-TKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEK 150 (470)
T ss_pred HHHHHHHHHHHHHhc-ccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCC
Confidence 466777776665432 122 2444 3332 34577777666665443344444 689999999999999999986
Q ss_pred CCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCH
Q 010897 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP 192 (498)
Q Consensus 113 ~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~ 192 (498)
+ ..+|++|+||||||++|++++|+.+ .++.+|+|+.+|+|+.|+++++|++++.||++++ ++||+
T Consensus 151 ~---~~~G~vtsGGTEaNL~Al~aARe~~-----------~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~-g~mD~ 215 (470)
T PLN02263 151 N---EYWGYITNCGTEGNLHGILVGREVF-----------PDGILYASRESHYSVFKAARMYRMECVKVDTLVS-GEIDC 215 (470)
T ss_pred C---CCeEEEeCcHHHHHHHHHHHHHhhc-----------CCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC-CcCcH
Confidence 3 2569999999999999999998852 1348999999999999999999999999999864 89999
Q ss_pred HHHHHHhhhC---CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCc-----eEEEecCcccccccccCCCCccccC
Q 010897 193 VKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT-----PIHVDAASGGFIAPFLYPDLEWDFR 264 (498)
Q Consensus 193 ~~L~~~i~~~---t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~-----~l~vD~A~~g~~~~~~~~~~~~~~~ 264 (498)
++|+++|.++ |.+|+++.|||++|.+||+++|+++|+++ |+ |+||||||||+++||......++|.
T Consensus 216 ~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~------g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~ 289 (470)
T PLN02263 216 ADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC------GFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK 289 (470)
T ss_pred HHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc------CCccCCeeEEEeccchhhHhhhcccccccCCC
Confidence 9999999765 57888999999999999999999999999 75 9999999999998887654456665
Q ss_pred CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHH
Q 010897 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIM 344 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~ 344 (498)
.+ +|||++|+|||+++|.+||++++|++. + ..+..++.|+.... .++.+||++..++++|+.|+.+|.+||++++
T Consensus 290 ~~-vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d--~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i 364 (470)
T PLN02263 290 KP-IGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYRGFQKEV 364 (470)
T ss_pred cC-ccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC--CCcCCCCCcHHHHHHHHHHHHhCHHHHHHHH
Confidence 54 999999999999999999999999642 2 45556778988754 4677999987899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCC
Q 010897 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRED 424 (498)
Q Consensus 345 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~ 424 (498)
+++.++++++.+.|++.+ ++++..+ ..++|+|+-+. ..+..+||.+... ...+|++++++
T Consensus 365 ~~~~~~A~~l~~~l~~~g-~~~~~~p-~s~~V~f~~p~----------~~~~~~gW~L~~~--------~~~~Hivvmph 424 (470)
T PLN02263 365 QKCLRNAHYLKDRLREAG-ISAMLNE-LSSTVVFERPK----------DEEFVRRWQLACQ--------GNIAHVVVMPS 424 (470)
T ss_pred HHHHHHHHHHHHHHHhCC-CeEEeCC-CceEEEEecCc----------hHHhhcceEEccC--------CCcEEEEEcCC
Confidence 999999999999999986 7766655 58889997532 1123579876431 13499999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 010897 425 FSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 425 ~t~~~~~~l~~~l~~~l~~l 444 (498)
.+.+.+|+|++||++..+..
T Consensus 425 v~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 425 VTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred CCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999887643
No 9
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-47 Score=368.88 Aligned_cols=414 Identities=19% Similarity=0.242 Sum_probs=348.8
Q ss_pred ccccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhc----cCCCCCcccccccCCC--hHHHHHHHHHHhccCCCCC
Q 010897 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDM 87 (498)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~--~~~~~~~l~~~~~~n~~~~ 87 (498)
+-+-..|||++..+|. +.|+.+.++++++.+++.+++. ++||+| ++|+|+.. +..+++++...++.-.++|
T Consensus 29 v~P~v~PGYl~~llP~-~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~f--hAyfpa~~s~~siladmLs~~i~~vGFtW 105 (511)
T KOG0628|consen 29 VLPDVKPGYLRDLLPS-KAPEKPESWEDILGDLEKIIMPGITHWQHPHF--HAYFPAGNSYPSILADMLSGGIGCVGFTW 105 (511)
T ss_pred CCCCCCcchhhhhCCC-CCCCChhhHHHHHHHHHHHccCCCcccCCCce--eeEccCccchHHHHHHHHhccccccccee
Confidence 6677889999999999 9999999999999999999873 689997 77777754 4568888888888888999
Q ss_pred cCCcchHHHHHHHHHHHHHHcCCCCCC----CCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCC------CCCcEE
Q 010897 88 DEYPVTTELQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP------YDKPNI 157 (498)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~----~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~------~~~~~I 157 (498)
..+|..++||..+.+||++++++|..+ ..+..|++-.++||+++.++++++.+...+.+..-.. ..+-.+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 999999999999999999999999643 2345688888999999999999998766554322111 123478
Q ss_pred EEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC------CeEEEEeeccCCcccccCHHHHHHHHHHh
Q 010897 158 VTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~------t~~v~~~~~~t~tG~~~~l~~I~~la~~~ 231 (498)
|+|+.+|++++++|...|++++.++.++ +|.|+.+.|+++|.++ |..|+++.|||.+..+|++.+|..+|+++
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhc
Confidence 9999999999999999999999999988 4999999999999864 78899999999999999999999999999
Q ss_pred hcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC
Q 010897 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (498)
Q Consensus 232 ~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~ 310 (498)
++|+|||+||+|.+ |.+|+.+... +++.+||++++.|||+++...|..+|+++...+.+.+..++.||...
T Consensus 265 ------glWLHVDAAYAGsa--~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628|consen 265 ------GLWLHVDAAYAGSA--FICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred ------CEEEEeehhhcccc--ccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcch
Confidence 99999999999876 5899887666 79999999999999999999999999999988888887888888653
Q ss_pred C-------CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 311 Q-------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 311 ~-------~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
. ..+.+.-+|. +..+++|..++.+|.+++++++++..++++.+.+.+.+.+.|++..+. ..++||||+++.
T Consensus 337 ~~~~~~Dyrhwqipl~rR-fRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~-~lgLvcFRlk~~ 414 (511)
T KOG0628|consen 337 YQGSAPDYRHWQIPLGRR-FRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR-ILGLVCFRLKGD 414 (511)
T ss_pred hhccCCCccccccccccc-hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc-ccceeEEeecCC
Confidence 2 2344555554 789999999999999999999999999999999999999999999876 689999999876
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCC-HHHHHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFS-RSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t-~~~~~~l~~~l~~~l~~l~ 445 (498)
+. ..+.|.++++..|.+ +..|....+..+||++|+...| .++++.-.+.|.+..+.+.
T Consensus 415 N~-~ne~Ll~~in~~g~i---~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 415 NE-INEALLNRLNSSGRI---HLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred cH-HHHHHHHHHHhcCcE---EEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 43 346899999999977 3334456788999999987654 4566655555555555543
No 10
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=4.9e-44 Score=360.41 Aligned_cols=345 Identities=20% Similarity=0.286 Sum_probs=278.3
Q ss_pred ccCCCCCcccc-cccCCChHHHHHHHHHHhccCCCCCcCCc----chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecCh
Q 010897 52 LDGNPRLNLAS-FVTTWMEPECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (498)
Q Consensus 52 ~~~~p~~~~~~-~~~~~~~~~~~~~l~~~~~~n~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (498)
++.+|++.++- +...+....+.+++....+ |..+|.+.+ ...++|+++++|+++++|++.++ .+|++|+||
T Consensus 18 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~---~~G~~TsGg 93 (380)
T PRK02769 18 LRHNQYFNVGYPEAADFDYSALKRFFSFSIN-NCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNE---SWGYITNGG 93 (380)
T ss_pred HHHhhhcccCCCchhhcCHHHHHHHHHhhhc-cCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCC---CCEEEecCh
Confidence 45678762221 1121223445555544444 555555544 47899999999999999998632 468999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC---C
Q 010897 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---T 203 (498)
Q Consensus 127 sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~---t 203 (498)
||+|++|++++++.. .+++||+|+.+|+|+.++++++|++.+.|++++ ++++|+++|+++|+++ |
T Consensus 94 Tean~~a~~~ar~~~-----------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~-~g~id~~~L~~~i~~~~~~t 161 (380)
T PRK02769 94 TEGNLYGCYLARELF-----------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP-NGEIDYDDLISKIKENKNQP 161 (380)
T ss_pred HHHHHHHHHHHHHhC-----------CCcEEEeCCCceehHHHHHHHcCCCCceeccCC-CCcCcHHHHHHHHHhCCCCc
Confidence 999999998887531 135899999999999999999999999999976 4899999999999987 9
Q ss_pred eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCC---ceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC
Q 010897 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD---TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~---~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~ 280 (498)
++|+++++||.+|.++|+++|+++|+++ + +|+|||+|+|++.+||.......++.. ++||+++|+|||++
T Consensus 162 ~lvv~t~gtt~tG~idpi~~I~~i~~~~------g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~ 234 (380)
T PRK02769 162 PIIFANIGTTMTGAIDNIKEIQEILKKI------GIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIG 234 (380)
T ss_pred EEEEEEeCCCCCcccCCHHHHHHHHHHh------CCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCC
Confidence 9999999999999999999999999999 6 799999999999988876555566655 89999999999999
Q ss_pred CCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 281 ~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
+|.|+|++++|++ .+ ..+.....|+... ..++.|||++..++++|++|+.+|.+||+++.+++.++++++.+.|++
T Consensus 235 ~P~g~G~l~~r~~-~~-~~~~~~~~yl~~~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~ 310 (380)
T PRK02769 235 SPMPCGIVLAKKK-YV-ERISVDVDYIGSR--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA 310 (380)
T ss_pred CCCCcEEEEEehh-hh-hhcccCccccCCC--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999974 33 2333456787654 346789999899999999999999999999999999999999999998
Q ss_pred CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+ ++++.+| ..++|+|+.+. .++. +||.+... ...+|++++.+.+++.+|.|+++|...
T Consensus 311 ~g-~~~~~~p-~~~~v~f~~~~------~~~~-----~~w~l~~~--------~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 311 NG-IPAWRNP-NSITVVFPCPS------ERIW-----KKWHLATS--------GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred CC-CEEEcCC-CceEEEEcCCC------HHHH-----hCeeEccc--------CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 75 8888776 68999997642 1221 68876432 136999999999999999999999988
Q ss_pred HHHH
Q 010897 441 LKEI 444 (498)
Q Consensus 441 l~~l 444 (498)
+...
T Consensus 370 ~~~~ 373 (380)
T PRK02769 370 LKNP 373 (380)
T ss_pred Hhcc
Confidence 7643
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=3.2e-44 Score=358.93 Aligned_cols=328 Identities=20% Similarity=0.227 Sum_probs=268.7
Q ss_pred HHHHHHHHHhccCCCCCcCCc----chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 71 ECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 71 ~~~~~l~~~~~~n~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
...+.+...+..|..+|.... ...++|+++++|+++++|+++++ .+|++|+||||||++|++++++..
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~---~~G~fTsGGTEaNl~al~~ar~~~----- 109 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDE---YWGYITTCGTEGNLHGILVGREVF----- 109 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCcc---CCEEEeCchHHHHHHHHHHHHHhC-----
Confidence 355666667766666654443 67999999999999999998632 458999999999999999886531
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKL 223 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~ 223 (498)
.++.|++|..+|+|+.++++++|++++.||++++ ++||+++|+++|++ +|.+|+++.+||.+|.+||+++
T Consensus 110 ------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~e 182 (374)
T PLN03032 110 ------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPS-GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDR 182 (374)
T ss_pred ------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC-CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHH
Confidence 1247999999999999999999999999999875 89999999999987 4789999999999999999999
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
|+++|++++-. +.++|+|||+|+|++.+||.......++. ..+||+++|+|||+++|.|+|++++|++ .+ ..+..+
T Consensus 183 I~~i~~~~g~~-~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~-~~-~~~~~~ 258 (374)
T PLN03032 183 ILRILKELGYT-EDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKK-HV-KALSQN 258 (374)
T ss_pred HHHHHHHhCCC-CCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEch-hh-HhhccC
Confidence 99999999100 00369999999999988876544445554 3699999999999999999999999974 22 445567
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
..|+...+ .++.|||++..++++|+.|+.+|.+||+++++++.+++++|.+.|++.+ ++++..| ..++|+|+-+..
T Consensus 259 ~~Yl~~~d--~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p-~~~~V~f~~~~~ 334 (374)
T PLN03032 259 VEYLNSRD--ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNE-LSSTVVFERPMD 334 (374)
T ss_pred CcccCCCC--CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECC-CceEEEEcCCCc
Confidence 88987653 5788999989999999999999999999999999999999999999986 7776665 578899976421
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
+.+ .+||.+... ...+|++++++.+++.+|+|++||++
T Consensus 335 ---------~~~-~~~w~l~~~--------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 335 ---------EAF-IKKWQLACE--------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ---------HhH-hheeeeccc--------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 112 268876431 13699999999999999999999875
No 12
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=8.1e-44 Score=372.69 Aligned_cols=342 Identities=17% Similarity=0.215 Sum_probs=269.1
Q ss_pred CCCCCCCCHHHHHHHHHHhhh----ccCCC-CCcccccccCCCh--HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDELM----LDGNP-RLNLASFVTTWME--PECDKLVMASINKNYVDMDEYPVTTELQNRCVNM 103 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~----~~~~p-~~~~~~~~~~~~~--~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~ 103 (498)
.+.+...+.+++++.+.+.+. ...|| +| .+++++++. ..+.+++...+|.|...|+.+|.++.+|+++.+|
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry--~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~ 131 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY--WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKE 131 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccce--EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHH
Confidence 344455578888988887664 23677 76 666655543 3588999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH-H---HH----------------------------------
Q 010897 104 IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ-Q---KR---------------------------------- 145 (498)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~-~---~~---------------------------------- 145 (498)
+++++|++. .+|++|+|||+||+.|++++|+... + +.
T Consensus 132 la~l~G~~~-----~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~ 206 (608)
T TIGR03811 132 FATLMGYKN-----GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQID 206 (608)
T ss_pred HHHHhCCCC-----CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchh
Confidence 999999985 4699999999999999999998531 0 00
Q ss_pred --Hh----cCCCCCCc-EEEEcCCchhHHHHHHHHcCCe---eEEEEecCCccccCHHHHHHHhhhC------CeEEEEe
Q 010897 146 --KE----QGKPYDKP-NIVTGANVQVCWEKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDEN------TICVAAI 209 (498)
Q Consensus 146 --~~----~g~~~~~~-~Iv~s~~~h~~~~~~~~~~g~~---~~~v~~~~~~~~~d~~~L~~~i~~~------t~~v~~~ 209 (498)
+. .|....+. ++++|+..|+||.|+|.++|++ ++.||++++ ++||+++|++.|.+. +.+||++
T Consensus 207 ~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVat 285 (608)
T TIGR03811 207 EIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSN-YRMDINELEKIIRKLAAEKTPILGVVGV 285 (608)
T ss_pred hhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 00 01111122 7899999999999999999996 899999875 899999999999752 5679999
Q ss_pred eccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC------------------------------CC
Q 010897 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP------------------------------DL 259 (498)
Q Consensus 210 ~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~------------------------------~~ 259 (498)
.|||.+|.+||+++|+++|++.. ++|...|+||||||||++.+++.+ +.
T Consensus 286 aGTT~~GaiDpl~eI~~l~~~~~-~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~ 364 (608)
T TIGR03811 286 VGSTEEGAVDGIDKIVALRNKLM-KEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREV 364 (608)
T ss_pred cCCcCCcccCCHHHHHHHHHHHH-HcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhH
Confidence 99999999999999999994421 112234799999999975222221 11
Q ss_pred cccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC-------CCCccccCCCchHHHHHHHHH
Q 010897 260 EWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD-------QPTFTLNFSKGSSQIIAQYYQ 331 (498)
Q Consensus 260 ~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~-------~~~~~l~~sr~~~~~~a~~~~ 331 (498)
+..+ +++.+|||++++||||++|++||++++|++. +.+.+.....|+... ...+++.|||.+..++++|++
T Consensus 365 ~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~ 443 (608)
T TIGR03811 365 YNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAA 443 (608)
T ss_pred HHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH-HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHH
Confidence 1222 5789999999999999999999999999985 445556677887531 124678899988889999999
Q ss_pred HHHh--cHHHHHHHHHHHHHHHHHHHHHHhc------CCCeEE--eeCCCCccEEEEEecCC
Q 010897 332 FIRL--GFEGYKNIMENCMGNARALREGLEK------TGRFEI--LSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 332 l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~------~~~~~~--~~~~~~~~~v~f~~~~~ 383 (498)
++.+ |.+||.++++++.++++++.+.|++ .+.|++ +.++ .+++|||++.+.
T Consensus 444 lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~p-dlniV~Fr~~~~ 504 (608)
T TIGR03811 444 HKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKP-DFNMVDYVFNEK 504 (608)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCC-CcceEEEEEecC
Confidence 9998 9999999999999999999999998 455776 5554 799999998643
No 13
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=317.95 Aligned_cols=401 Identities=18% Similarity=0.209 Sum_probs=319.4
Q ss_pred CchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhc---cCCCCCcccccccCCCh--HHHHHHHHHHhccCCCCCcCCcch
Q 010897 19 ASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWME--PECDKLVMASINKNYVDMDEYPVT 93 (498)
Q Consensus 19 ~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~--~~~~~~l~~~~~~n~~~~~~~~~~ 93 (498)
-|..+++ +-.+++|+++.+.+++++..++.+.. +|||+| ++......+ ..+.+++++++|.|.+.|+..|..
T Consensus 63 hP~~L~~-l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprf--fNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF 139 (510)
T KOG0629|consen 63 HPDELKE-LFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRF--FNQLSSGLDPIGLAGEWLTSTANTNMFTYEIAPVF 139 (510)
T ss_pred ChHHHHH-HhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcc--hhhhccCCCHHHHHHHHHHhccCCCCceEEecceE
Confidence 3444544 33558999999999999999999874 689997 332233333 458899999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-EEEEcCCchhHHHHHHH
Q 010897 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWEKFAR 172 (498)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~-~Iv~s~~~h~~~~~~~~ 172 (498)
..+|.++...+.++.|++.+ ..++++.||+-+|++++.+++.+..++.+..|...-.+ .+++|+.+|+|+.+++.
T Consensus 140 ~lmE~~vl~km~~ivGw~~~----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa 215 (510)
T KOG0629|consen 140 VLMEEEVLAKMREIVGWEEG----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA 215 (510)
T ss_pred EeehHHHHHHHHHHhCCCCC----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH
Confidence 99999999999999999974 24999999999999999999988877766666433234 56789999999999999
Q ss_pred HcCCe---eEEEEecCCccccCHHHHHHHhhh---C---CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 173 YFEVE---LKEVKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 173 ~~g~~---~~~v~~~~~~~~~d~~~L~~~i~~---~---t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
.+|++ ++.|++++. +.|++++|++.|-+ + |.+|.+|.|+|..|++||++.|+++|++| ++|+||
T Consensus 216 ~lg~gtd~c~~v~t~e~-Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~------~lWmHv 288 (510)
T KOG0629|consen 216 FLGLGTDHCIKVKTDER-GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH------KLWMHV 288 (510)
T ss_pred HhccCCceeEEeccccc-CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc------CEEEEe
Confidence 99965 899999874 89999999998864 3 78999999999999999999999999999 999999
Q ss_pred ecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCC---------C
Q 010897 244 DAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQP---------T 313 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~---------~ 313 (498)
|||+||+.+ ++...++.+ +++.++|+++++||++++|..|+.+++|....+..+...+..|+..... .
T Consensus 289 DAAwGGglL--mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgd 366 (510)
T KOG0629|consen 289 DAAWGGGLL--MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGD 366 (510)
T ss_pred ecccccccc--cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeeccccccc
Confidence 999999864 666667766 7899999999999999999999999999887777776666777765332 3
Q ss_pred ccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CCccEEEEEecCCC--C-----
Q 010897 314 FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSS--A----- 385 (498)
Q Consensus 314 ~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~--~----- 385 (498)
-++++.|. ..++++|+.|++-|..||++.++++.++|+||.+.|++.++++.+... +..-.|||.+.++. +
T Consensus 367 K~iQCGRh-~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~ 445 (510)
T KOG0629|consen 367 KAIQCGRH-VDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENP 445 (510)
T ss_pred chhhcCcc-ccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccc
Confidence 34556654 588999999999999999999999999999999999999987766543 35566777664331 0
Q ss_pred -CC------HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCC-CCHHHHHHHHHHHH
Q 010897 386 -HT------VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRED-FSRSLVERLISHIE 438 (498)
Q Consensus 386 -~~------~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~-~t~~~~~~l~~~l~ 438 (498)
.+ ...+-.++.++|-...+|.. .....+++|+++.+. .+..++|-+++.|+
T Consensus 446 e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqP--l~~~~nffr~v~sn~a~~~ad~dflldEIe 504 (510)
T KOG0629|consen 446 ERDSRLVKVAPKIKERMMKKGTTMIGYQP--LGDKPNFFRMVISNPALTEADLDFLLDEIE 504 (510)
T ss_pred hhhhHHHhhCcHHHHHHHhccceeeEecc--cccccchhheecccchhhhhhHHHHHHHHH
Confidence 01 12556778888877766653 234466899998754 35555555554444
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=5.5e-38 Score=319.50 Aligned_cols=369 Identities=30% Similarity=0.438 Sum_probs=291.0
Q ss_pred CCHHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCC
Q 010897 37 MPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (498)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (498)
.+++++++.++....-|-.+. ...++.++++.|.+.+++.+.+..+...+..+++...+++++++++++++|.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--- 77 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE-RILSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDA--- 77 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH-HeeeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC---
Confidence 356788888877654321111 1356666678888889998888776555555678888889999999999998752
Q ss_pred CcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHH
Q 010897 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (498)
Q Consensus 117 ~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~ 196 (498)
.+++++|++++++.++.+++... ..++++|++++..|++|.++++..|++++.||.+++ +.+|+++|+
T Consensus 78 --~~~~~~ggt~a~~~a~~~~~~~~---------~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~ 145 (371)
T PRK13520 78 --YGYITSGGTEANIQAVRAARNLA---------KAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDD-YRVDVKAVE 145 (371)
T ss_pred --CeEEecCcHHHHHHHHHHHHhhc---------cCCCceEEecCcchHHHHHHHHHcCceEEEecCCCC-CcCCHHHHH
Confidence 37899999999999988875420 012468999999999999999999999999998764 789999999
Q ss_pred HHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCC
Q 010897 197 ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (498)
Q Consensus 197 ~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~h 276 (498)
++|++++++|++++++|+||.+.|+++|.++|+++ |+++|||+||++++.++......+++...++|++++++|
T Consensus 146 ~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~------g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 146 DLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN------GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc------CCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 99998898888899999999999999999999999 999999999998876554332334555668999999999
Q ss_pred ccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010897 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 277 K~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~ 356 (498)
||+++|.++|++++++++.+ ..+.....|+.+.. .+...|++++..++++++++..++.+|++++.++..+++++|.+
T Consensus 220 K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 220 KMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK-QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred cccCccCCceEEEEcCHHHH-HhhcccCccccCCC-CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998775432 22222234443322 33445788777889999999999999999999999999999999
Q ss_pred HHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHH
Q 010897 357 GLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
.|+++ +++++.++ ..++++|.++ +..++.++|.++|+.+... ....++|++++..+|+++++++++.
T Consensus 298 ~L~~~-g~~~~~~~-~~~~v~~~~~-----~~~~v~~~L~~~gi~v~~~------~~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 298 ELKER-GFEPVIEP-VLNIVAFDDP-----NPDEVREKLRERGWRVSVT------RCPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHhC-CCEEecCC-CceEEEEecC-----CHHHHHHHHHHCCceeccC------CCCCEEEEEEECCCCHHHHHHHHHH
Confidence 99998 48844443 5788888874 4568999999999887542 1235799999988999999999999
Q ss_pred HHHHHH
Q 010897 437 IEEVLK 442 (498)
Q Consensus 437 l~~~l~ 442 (498)
|+++++
T Consensus 365 l~~~~~ 370 (371)
T PRK13520 365 LKEVKK 370 (371)
T ss_pred HHHHhh
Confidence 987754
No 15
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3.4e-38 Score=317.85 Aligned_cols=331 Identities=34% Similarity=0.446 Sum_probs=267.3
Q ss_pred cccccCCCh-HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 61 ASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 61 ~~~~~~~~~-~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++|++...+ ..+.+++...+|.+...|+.++...++|+++++|+++++|++.. ...+++|+|+|+|+++++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~---~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 3 AGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE---DADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred ccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC---CCCEEEeCChhHHHHHHHHHHHH
Confidence 444444443 35889999999988777888999999999999999999999721 13499999999999999999877
Q ss_pred HHHHHHHhcCC-CCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh------CCeEEEEeecc
Q 010897 140 KWQQKRKEQGK-PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGS 212 (498)
Q Consensus 140 ~~~~~~~~~g~-~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~------~t~~v~~~~~~ 212 (498)
++.++.+..|. +.++++|++++++|+++.++++.+|++++.+|++++ +.+|+++|++++.+ ++++|++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~ 158 (345)
T cd06450 80 RARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGT 158 (345)
T ss_pred HhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEeccc
Confidence 54333222221 122458999999999999999999999999999875 68999999999987 78899999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeC
Q 010897 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (498)
Q Consensus 213 t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~ 292 (498)
|++|.++|+++|.++|+++ |+|+|+|+||+.+..++..... .+...+++|++++++|||+++|.|+|+++++
T Consensus 159 ~~tG~~~~~~~i~~~~~~~------~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~- 230 (345)
T cd06450 159 TDTGAIDPLEEIADLAEKY------DLWLHVDAAYGGFLLPFPEPRH-LDFGIERVDSISVDPHKYGLVPLGCSAVLVR- 230 (345)
T ss_pred CCCCCCCCHHHHHHHHHHh------CCeEEEechhhHHHhhChhhHH-HhcCccccCEEEEchhHhhCCCcchHHHHHH-
Confidence 9999999999999999999 9999999999988754322111 1234567999999999999999999987644
Q ss_pred CCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC
Q 010897 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (498)
++++|++++.++.+++++++++..++++++.+.|+++++++++.++ .
T Consensus 231 --------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~ 277 (345)
T cd06450 231 --------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-N 277 (345)
T ss_pred --------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-c
Confidence 7788999999999999999999999999999999999889887654 6
Q ss_pred ccEEEEEecCC--CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCC-CHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDS--SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDF-SRSLVERLISHIEE 439 (498)
Q Consensus 373 ~~~v~f~~~~~--~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~-t~~~~~~l~~~l~~ 439 (498)
.++++|++++. .+.+..++.++|.++|+++..... .....++|++++..+ |.+++++|+++|++
T Consensus 278 ~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~---~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 278 LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATT---LGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeE---ECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 89999998541 024567899999999655432211 124578999998764 99999999988865
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.5e-35 Score=301.85 Aligned_cols=365 Identities=30% Similarity=0.449 Sum_probs=278.4
Q ss_pred HHHHHHHHHHhhhc---cCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCC
Q 010897 39 KEAAYQVINDELML---DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADD 115 (498)
Q Consensus 39 ~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~ 115 (498)
.+++++.+.+...- .+.+++ +.++.+ ++.|.+.+++...+..+...+..+++...+++++++++++++|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-- 77 (373)
T TIGR03812 2 EEEVLEELKEYRSEDLKYSDGRI-LGSMCT-NPHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA-- 77 (373)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcE-EEEEeC-CchHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC--
Confidence 46677777775432 234453 444444 45566677777776655444445677888889999999999999752
Q ss_pred CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHH
Q 010897 116 KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (498)
Q Consensus 116 ~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L 195 (498)
.+++++|+++++++++.++...... +..+++|++++++|++|.++++..|++++.++++++ +.+|++++
T Consensus 78 ---~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~d~~~l 146 (373)
T TIGR03812 78 ---YGYIVSGGTEANIQAVRAAKNLARE-------EKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDED-YTVDVKDV 146 (373)
T ss_pred ---CeEEeccHHHHHHHHHHHHHHHHhc-------cCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC-CCcCHHHH
Confidence 3788999999998888776532110 011358999999999999999999999999999764 88999999
Q ss_pred HHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC---CCccccCCCCeeEEE
Q 010897 196 VELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---DLEWDFRLPLVKSIN 272 (498)
Q Consensus 196 ~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~---~~~~~~~~~~~dsi~ 272 (498)
++++++++..|+++.++|+||.++|+++|.++|+++ ++|+|||+||+++..++... ....++...++|+++
T Consensus 147 ~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~------~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~ 220 (373)
T TIGR03812 147 EDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN------GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSIT 220 (373)
T ss_pred HHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc------CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEE
Confidence 999988886666667899999999999999999999 99999999999887654321 113345556799999
Q ss_pred EcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010897 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (498)
Q Consensus 273 ~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~ 352 (498)
+++|||+++|.++|++++++++.+ +.+.....|+... ..+...|+++...+++++++++.++.+|++++.++..++++
T Consensus 221 ~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~ 298 (373)
T TIGR03812 221 IDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTR 298 (373)
T ss_pred ECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999999998887776543 2222233454332 12334578877788999999999999999999999999999
Q ss_pred HHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHH
Q 010897 353 ALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
+|.+.|++++ ++.+.++ ..++++|++++ ..++.++|.++|+.++.. ....++|++++..+|.+++++
T Consensus 299 ~l~~~L~~~g-~~~~~~~-~~~~v~~~~~~-----~~~v~~~L~~~gi~v~~~------~~~~~iRis~~~~~t~edid~ 365 (373)
T TIGR03812 299 YLVEELKKIG-FEPVIEP-VLNIVAFEVDD-----PEEVRKKLRDRGWYVSVT------RCPKALRIVVMPHVTREHIEE 365 (373)
T ss_pred HHHHHHHhCC-CeEEcCC-CceEEEEEeCC-----HHHHHHHHHHCCceeccC------CCCCEEEEEEECCCCHHHHHH
Confidence 9999999987 5544333 57899998743 358999999999887542 124579999999899999999
Q ss_pred HHHHHHH
Q 010897 433 LISHIEE 439 (498)
Q Consensus 433 l~~~l~~ 439 (498)
++++|++
T Consensus 366 l~~~L~~ 372 (373)
T TIGR03812 366 FLEDLKE 372 (373)
T ss_pred HHHHHhh
Confidence 9988875
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-35 Score=283.91 Aligned_cols=346 Identities=16% Similarity=0.138 Sum_probs=274.3
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcC----CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
++++.|++.++|...+...+.++.+ ......+-+++++.+|+++|+++. .++||+|+||++.+++......
T Consensus 10 TTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~-----eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 10 TTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE-----EIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEecCCcHHHHHHHHhhHHh
Confidence 6788899999999888776544433 124455667899999999999873 3999999999999999885443
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHc---CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
+... .++-.||++...|.++...|+++ |+++.++|++.+ +.+|+++|+++|+++|.+|.+.+.||.+|.
T Consensus 85 ~~~~-------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v~~e~L~~al~~~T~LVSim~aNnE~G~ 156 (386)
T COG1104 85 YRNA-------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSN-GLVDLEQLEEALRPDTILVSIMHANNETGT 156 (386)
T ss_pred hhcc-------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCC-CeEcHHHHHHhcCCCceEEEEEecccCeee
Confidence 3211 01348999999999999999998 999999999985 899999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
++|+++|.++|+++ ++++|||++++.+-+|+ ++...++|.+++|+||+. +|.|+|.+++|+.-.
T Consensus 157 IQpI~ei~~i~k~~------~i~fHvDAvQa~Gkipi-------~~~~~~vD~ls~SaHK~~-GpkGiGaLyv~~~~~-- 220 (386)
T COG1104 157 IQPIAEIGEICKER------GILFHVDAVQAVGKIPI-------DLEELGVDLLSFSAHKFG-GPKGIGALYVRPGVR-- 220 (386)
T ss_pred cccHHHHHHHHHHc------CCeEEEehhhhcCceec-------cccccCcceEEeehhhcc-CCCceEEEEECCCCc--
Confidence 99999999999999 99999999998876554 333345999999999986 899999999865322
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEeeCC-CCc-c
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT-GRFEILSKD-VGV-P 374 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~-~~~-~ 374 (498)
+.+...|+.+..---.||.+...++++-.+++. ..+.+.....+...++++|.+.|.+. |++.+...+ .++ +
T Consensus 221 ----~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~ 295 (386)
T COG1104 221 ----LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPN 295 (386)
T ss_pred ----cCceeccCcCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCC
Confidence 334445665554333467766677766666644 34567788888999999999999976 878777664 333 5
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC----------------CCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN----------------AENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~----------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
++.|.+++ +..+.+.-.|...|+.++....... ......+|+|++..+|.+|++++++.++
T Consensus 296 ~~~~~f~g---v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386)
T COG1104 296 ILNFSFPG---VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386)
T ss_pred eEEEEeCC---CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHH
Confidence 77788864 6788999999999999865432111 1124789999999999999999999999
Q ss_pred HHHHHHHcC
Q 010897 439 EVLKEIESL 447 (498)
Q Consensus 439 ~~l~~l~~~ 447 (498)
++++.+++.
T Consensus 373 ~~i~~lr~~ 381 (386)
T COG1104 373 EIIKRLREL 381 (386)
T ss_pred HHHHHHhhh
Confidence 999998765
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.9e-34 Score=287.40 Aligned_cols=343 Identities=20% Similarity=0.152 Sum_probs=273.1
Q ss_pred cCCChHHHHHHHHHHhc---cCCC--CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASIN---KNYV--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~---~n~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++..+..+.+++.+.+. .|.. .+......++..++.++.+++++|.++. ..+++|.|.|+++.+...++..
T Consensus 31 ~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~----~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 31 TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS----DEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred cccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChhHHHHHHHHHhhh
Confidence 44446678888887753 3333 2223346677888999999999999852 2399999999999988888754
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchh----HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQV----CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~----~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
.+. .+++||++...|. .|...++..|++++.+|+++ ++.+|+++++..++++|++|.+++.+|.|
T Consensus 107 ~~~----------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~-~g~~~~~~~~~~i~~~Tklvais~vSn~t 175 (405)
T COG0520 107 SLK----------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD-DGLLDLDALEKLITPKTKLVALSHVSNVT 175 (405)
T ss_pred hhc----------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC-CCCcCHHHHHHhcCCCceEEEEECccccc
Confidence 311 2479999999997 68888899999999999985 48999999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
|.+.|+++|+++||++ |++++||+|++....|. |++..++|++.+|+|||+++|.|+|++++|+. .
T Consensus 176 G~~~pv~~I~~la~~~------ga~v~VDaaq~~~h~~i-------dv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~-~ 241 (405)
T COG0520 176 GTVNPVKEIAELAHEH------GALVLVDAAQAAGHLPI-------DVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE-L 241 (405)
T ss_pred cccchHHHHHHHHHHc------CCEEEEECccccCccCC-------CchhcCCCEEEEcccccccCCCceEEEEEchH-H
Confidence 9999999999999999 99999999998876544 45555799999999999999999999999864 2
Q ss_pred CCcccccccCccCCCC-------CCcc--------ccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 296 LPDELVFHINYLGSDQ-------PTFT--------LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 296 l~~~~~~~~~yl~~~~-------~~~~--------l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
+... .+...++.. ..++ -.|+.+...++++-++++.+...|+.++.++.+++++++.+.|++
T Consensus 242 l~~l---~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~ 318 (405)
T COG0520 242 LEEL---EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE 318 (405)
T ss_pred Hhhc---CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 2221 111111110 0011 125666677888889999999999999999999999999999999
Q ss_pred CCCeEEeeCCC--CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC-----CCCeeEEEEeecCCCCHHHHHHH
Q 010897 361 TGRFEILSKDV--GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN-----AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 361 ~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
+++++++.++. +.++++|++++ .+..+++..|.++||.+++...+.. ..-...+|+|++..+|.+|+|+|
T Consensus 319 ~~~v~i~g~~~~~r~~~vsF~v~~---~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l 395 (405)
T COG0520 319 LPGVEIYGPPDADRGGIVSFNVKG---IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRL 395 (405)
T ss_pred CCCeEEecCCcccCceEEEEEeCC---CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHH
Confidence 99999998764 78999999965 5788999999999988877643321 01123399999999999999999
Q ss_pred HHHHHHHHH
Q 010897 434 ISHIEEVLK 442 (498)
Q Consensus 434 ~~~l~~~l~ 442 (498)
++.|+++.+
T Consensus 396 ~~aL~~~~~ 404 (405)
T COG0520 396 LEALKKALA 404 (405)
T ss_pred HHHHHHHhh
Confidence 999998764
No 19
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=2.9e-31 Score=286.63 Aligned_cols=425 Identities=12% Similarity=0.103 Sum_probs=301.3
Q ss_pred CHHHHHHHHHHhhhccCC--CCCcccccccCCChHHHHHHHHHHhcc----CCCCCc-CCcchHHHHHHHHHHHHHHcCC
Q 010897 38 PKEAAYQVINDELMLDGN--PRLNLASFVTTWMEPECDKLVMASINK----NYVDMD-EYPVTTELQNRCVNMIAHLFNT 110 (498)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~l~~~~~~----n~~~~~-~~~~~~~le~~~~~~la~l~g~ 110 (498)
+..++++.++.+-..+-. ..|--.+-++...++ +.+.+..+.+. .++.++ ..++..+++.++.+||++++|+
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGsctmk~na-~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm 545 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGSCTMKLNA-TAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF 545 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCccCCCccCH-HHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence 888999998876544311 122112222333334 44444333333 233333 4567899999999999999999
Q ss_pred CCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCcccc
Q 010897 111 PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVM 190 (498)
Q Consensus 111 ~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~ 190 (498)
+. .+...++|+.+++.++++++... . ..|. .++.+|++|..+|.+..+.++..|++++.|+++++ +.+
T Consensus 546 d~------~Sl~p~aGA~gE~agL~aiR~y~-~---~rge-~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~-G~i 613 (939)
T TIGR00461 546 DA------ISLQPNSGAQGEYAGLRVIRSYH-E---SRGE-NHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD-GNI 613 (939)
T ss_pred CC------cccCCchHHHHHHHHHHHHHHHH-H---hcCC-CCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC-CCc
Confidence 83 37788889999988888886532 1 1121 13568999999998888889999999999999864 899
Q ss_pred CHHHHHHHhhh---CCeEEEEeeccCCcccccC-HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCC
Q 010897 191 NPVKAVELVDE---NTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (498)
Q Consensus 191 d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~ 266 (498)
|+++|++++++ +|++|++++|+| +|.++| +++|+++|+++ |.+++||+|+.........| +..
T Consensus 614 Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~------G~~v~VDgAq~~al~~l~~P------g~~ 680 (939)
T TIGR00461 614 DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF------GGQVYLDGANMNAQVGLTSP------GDL 680 (939)
T ss_pred CHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc------CCEEEEEecChhhCCCCCCc------ccc
Confidence 99999999974 899999999999 799987 99999999999 99999999995532222211 234
Q ss_pred CeeEEEEcCCccCC-----CCCCeEEEEEeCCCCCCccccccc-----CccCCCCC-Ccccc-CCCchHHHHHHHHHHHH
Q 010897 267 LVKSINVSGHKYGL-----VYAGVGWVVWRTKDDLPDELVFHI-----NYLGSDQP-TFTLN-FSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 267 ~~dsi~~s~hK~l~-----~p~g~g~~~~~~~~~l~~~~~~~~-----~yl~~~~~-~~~l~-~sr~~~~~~a~~~~l~~ 334 (498)
++|++.+++||+++ +++|+|++.+|.. +...++-.. ...+..+. ..+.+ +++.+..++..|+.|+.
T Consensus 681 GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~ 758 (939)
T TIGR00461 681 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKM 758 (939)
T ss_pred CCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHH
Confidence 69999999999888 5666799999853 322222111 00011110 11222 56666778999999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC---CCccEEEEEecCC---CCCCHHHHHHHHHhcCcEeeeecCC
Q 010897 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAFSLKDS---SAHTVFEISEGLRKFGWIVPAYTMP 408 (498)
Q Consensus 335 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~~~---~~~~~~~l~~~L~~~G~~v~~~~~~ 408 (498)
+|.+|+++..+....+++|+.+.|++. ++++.+. ...+-++|++++. .+.+..+++++|.+.|+..+...+|
T Consensus 759 lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~p 836 (939)
T TIGR00461 759 MGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFP 836 (939)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCc
Confidence 999999999999999999999999883 5666542 1345677877531 2467889999999999886553223
Q ss_pred CCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc--------Ccccccccccccccccccc-cC-CCccccccccc
Q 010897 409 ANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES--------LPSRVSTKTAHVIPMVNET-QG-DKPLKKSVRET 478 (498)
Q Consensus 409 ~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~--------~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ 478 (498)
..+.-++|+ ++..|.+|+|+|+++|..+-+++++ .++.+++. ||. +.+-++ +| +.+|++.+..+
T Consensus 837 --v~g~lmiep--TE~eskeelD~f~~al~~I~~e~~~~~~g~~~~~~~~l~~a-p~~-~~~~~~~~w~~~y~r~~a~~p 910 (939)
T TIGR00461 837 --VPGTLMVEP--TESESLEELDRFCDAMIAIKEEINALVAGQPKGQDNPLKNA-PHS-LQSLITSEWWHPYSREEAAYP 910 (939)
T ss_pred --cCCeEEEEe--eccCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHhhC-CCC-HHHhhcCCCCCCcChhhccCC
Confidence 233334444 4677999999999999999999987 33344444 776 333333 56 46777777655
Q ss_pred cc--chhhhhhhhcc-----cccccCC
Q 010897 479 QE--EVTRHWKRFVK-----GRRAGAC 498 (498)
Q Consensus 479 ~~--~~~~~~~~~~~-----~~~~~~~ 498 (498)
.. ...+||+.+.+ |++|.||
T Consensus 911 ~~~~~~~k~wp~v~r~d~~~gd~nl~c 937 (939)
T TIGR00461 911 APFLRYNKFWPTVARLDDTYGDRNLIC 937 (939)
T ss_pred CcccccCCcCCCcCCcccccccccccc
Confidence 42 33689999886 9999999
No 20
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=7.5e-31 Score=269.77 Aligned_cols=341 Identities=18% Similarity=0.143 Sum_probs=257.5
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcC-----CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+++.+.+......+.. .....+...++++.+++++|.+.+ ..+++|+|+|+++.+++.++..
T Consensus 28 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~~~~~t~~i~~~~~~~~~ 103 (401)
T PRK10874 28 TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA----KNIVWTRGTTESINLVAQSYAR 103 (401)
T ss_pred ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHhhh
Confidence 3455667888888777653322211 234456667889999999999421 2388999999999888877632
Q ss_pred H-HHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 140 K-WQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 140 ~-~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
. +. .+++|+++++.|.+ |...++..|++++.++++++ +.+|+++++++++++|++|++++++|+
T Consensus 104 ~~~~----------~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~i~~~~n~ 172 (401)
T PRK10874 104 PRLQ----------PGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD-RLPDVDLLPELITPRTRILALGQMSNV 172 (401)
T ss_pred ccCC----------CcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC-CcCCHHHHHHhcCcCcEEEEEeCCccc
Confidence 1 10 24689999999964 66778889999999999764 789999999999999999999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
||.+.|+++|.++|+++ |++++||++|+.+..++ ++...++|++.+++|| +++|.|+|+++.+++
T Consensus 173 tG~~~~~~~i~~l~~~~------g~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~- 237 (401)
T PRK10874 173 TGGCPDLARAITLAHQA------GMVVMVDGAQGAVHFPA-------DVQALDIDFYAFSGHK-LYGPTGIGVLYGKSE- 237 (401)
T ss_pred ccCcCCHHHHHHHHHHc------CCEEEEECCcccccccC-------CchhcCCCEEEEeccc-ccCCCccEEEEEchH-
Confidence 99999999999999999 99999999997543322 2222358999999999 567899999987643
Q ss_pred CCCcccccccCccCCC----------------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010897 295 DLPDELVFHINYLGSD----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~----------------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 358 (498)
.+... . .+.++. ...|. .|+.+...++++.+++..+...|+.++.++..++++++.+.|
T Consensus 238 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~e-~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l 312 (401)
T PRK10874 238 LLEAM-S---PWQGGGKMLTEVSFDGFTPQSAPWRFE-AGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDAL 312 (401)
T ss_pred HHhcC-C---CeecCCcceEeeccCccCCCCChhhcc-CCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 22111 0 111110 01122 256776788899999998888888888899999999999999
Q ss_pred hcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC-----CCCeeEEEEeecCCCCHHHHHHH
Q 010897 359 EKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN-----AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
+++++++++.++ ..++++|.+++ .+..++.+.|.++|+.++....+.. ....+++|+|++..+|.+|+++|
T Consensus 313 ~~~~g~~~~~~~-~~~i~~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~l 388 (401)
T PRK10874 313 AKLPGFRSFRCQ-DSSLLAFDFAG---VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDAL 388 (401)
T ss_pred hcCCCEEEeCCC-CCcEEEEEECC---cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHH
Confidence 999889887654 56788998743 4667899999999998876443211 01135799999999999999999
Q ss_pred HHHHHHHHHHH
Q 010897 434 ISHIEEVLKEI 444 (498)
Q Consensus 434 ~~~l~~~l~~l 444 (498)
++.|+++++.+
T Consensus 389 l~al~~~~~~~ 399 (401)
T PRK10874 389 VNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 21
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=5.7e-31 Score=270.40 Aligned_cols=346 Identities=18% Similarity=0.138 Sum_probs=257.8
Q ss_pred CcccccccCCChHHHHHHHHHHhccCCCCC--cC---CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHH
Q 010897 58 LNLASFVTTWMEPECDKLVMASINKNYVDM--DE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (498)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~--~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~l 132 (498)
+|.++ ++++++.+.+++.+.+......+ .. .....+...++++.+++++|.+.+ ..+++|+|+|+++.+
T Consensus 20 ld~a~--~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~t~g~t~~l~~ 93 (398)
T TIGR03392 20 LDSAA--TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA----ENIVWTRGTTESINL 93 (398)
T ss_pred eeCcc--ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChHHHHHH
Confidence 44444 33556778888887765422211 11 223445566789999999998532 138899999999998
Q ss_pred HHHHHHHH-HHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEE
Q 010897 133 AGLAFKRK-WQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (498)
Q Consensus 133 a~~a~~~~-~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~ 207 (498)
++.++... + ..+++|+++++.|.+ |...++..|++++.+|++++ +.+|+++++++++++|++|+
T Consensus 94 ~~~~~~~~~~----------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~ 162 (398)
T TIGR03392 94 VAQSYARPRL----------QPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLPDIRQLPELLTPRTRILA 162 (398)
T ss_pred HHHHhhhccC----------CCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHHhccCceEEE
Confidence 88776321 1 024689999999975 56677889999999999765 78999999999999999999
Q ss_pred EeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 208 ~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
+++++|+||.+.|+++|.++|+++ |+++++|++|+.+..++ ++....+|++++|+|| +++|.|+|+
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~~-------~~~~~~~d~~~~s~~K-~~gp~G~G~ 228 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQY------GAVVVVDGAQGVVHGPP-------DVQALDIDFYAFSGHK-LYGPTGIGV 228 (398)
T ss_pred EECccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCCCC-------ChhhcCCCEEEEeccc-ccCCCceEE
Confidence 999999999999999999999999 99999999997654322 2222358999999999 557889999
Q ss_pred EEEeCCCCCCcccccccCccCCCC----------------CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQ----------------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~----------------~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a 351 (498)
++.++. .+.. + . .+.++.. ..|. .|+.+...++++.++++.+...|+.++.++..+++
T Consensus 229 l~~~~~-~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~e-~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 229 LYGKTE-LLEA-M--P-PWQGGGKMLSHVSFDGFIPQAVPHRFE-AGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred EEEcHH-HHhh-C--C-CeecCCceEeeccccccccCCChhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 987643 2211 1 1 1111100 0111 26777778889999999888888888889999999
Q ss_pred HHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC-----CCCeeEEEEeecCCCC
Q 010897 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN-----AENVAVLRVVVREDFS 426 (498)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t 426 (498)
+++.+.|+++++++++.++ ..++++|.+++ .+..++.+.|.++|+.++....... ....+++|||++..+|
T Consensus 303 ~~l~~~l~~l~g~~~~~~~-~~~i~~~~~~~---~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t 378 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCP-GSSLLAFDFAG---VHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT 378 (398)
T ss_pred HHHHHHHhcCCCeEEeCCC-CCcEEEEEeCC---cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC
Confidence 9999999999889887554 46788888743 5677899999999998865432210 0113579999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010897 427 RSLVERLISHIEEVLKEI 444 (498)
Q Consensus 427 ~~~~~~l~~~l~~~l~~l 444 (498)
.+|+++|++.|+++++.+
T Consensus 379 ~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 379 QQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988754
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=3.2e-30 Score=263.19 Aligned_cols=342 Identities=13% Similarity=0.074 Sum_probs=254.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcC-C---cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDE-Y---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~-~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
++++++.+.+++.+.+.....++.. + +....+.+++++++++++|.+.+ .+++|+|+|+++.+++.++...
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~i~~t~~~t~a~~~al~~~~~~ 82 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-----EIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCcHHHHHHHHHHHHHHh
Confidence 4456677888888776543322221 1 33456677899999999998752 3899999999999888876432
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHHHH---HcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~---~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
+. ++++|+++...|.++...++ ..|++++.+|++++ +.+|+++++++++++|++|++++++|+||.
T Consensus 83 ~~----------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~ 151 (379)
T TIGR03402 83 QP----------EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE-GRLDLEELRAAITDDTALVSVMWANNETGT 151 (379)
T ss_pred cC----------CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEEcccCCeee
Confidence 10 13589999999987765433 35999999998764 789999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
+.|+++|.++|+++ |+++|+|++++.+..|+ ++...++|++++++|| +++|.|+|+++++....+
T Consensus 152 ~~~~~~I~~l~~~~------g~~vivD~~~~~g~~~~-------~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~- 216 (379)
T TIGR03402 152 IFPIEEIGEIAKER------GALFHTDAVQAVGKIPI-------DLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF- 216 (379)
T ss_pred cccHHHHHHHHHHc------CCEEEEECccccccccc-------CcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC-
Confidence 99999999999999 99999999998654433 3333469999999999 678999999998764321
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeeCCC-C-cc
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGRFEILSKDV-G-VP 374 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~-~-~~ 374 (498)
.+.+.++....-.-.|+.+...++++.++++.+. +.+.++.++..++++++.+.|++ ++++++..++. . .+
T Consensus 217 -----~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 290 (379)
T TIGR03402 217 -----RPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPN 290 (379)
T ss_pred -----CCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCC
Confidence 2222222211101136666667777777776653 46777888889999999999986 88888876532 2 34
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCC----------------CCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANA----------------ENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~----------------~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
++.|.++. .+..++...|.++|+.+......... ...+.+|+|++..+|.+|+|++++.|+
T Consensus 291 ~~~~~~~~---~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~ 367 (379)
T TIGR03402 291 TVNISFEY---IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLP 367 (379)
T ss_pred EEEEEecC---CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 78787743 46779999999999988653321110 113679999999999999999999999
Q ss_pred HHHHHHHc
Q 010897 439 EVLKEIES 446 (498)
Q Consensus 439 ~~l~~l~~ 446 (498)
++++.+++
T Consensus 368 ~~~~~~~~ 375 (379)
T TIGR03402 368 PIIARLRA 375 (379)
T ss_pred HHHHHHHh
Confidence 99887654
No 23
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.9e-30 Score=270.86 Aligned_cols=394 Identities=13% Similarity=0.112 Sum_probs=270.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhhccCC--CCCcccccccCCChHHHHHHHHHHh-ccCCCCC--c-CCcchHHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDELMLDGN--PRLNLASFVTTWMEPECDKLVMASI-NKNYVDM--D-EYPVTTELQNRCVNMI 104 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~l~~~~-~~n~~~~--~-~~~~~~~le~~~~~~l 104 (498)
.+|+ .+..++++.++++...+.. ..|--.++.....+|.+.+.+.+.- ..+...| + .+++..++..++++++
T Consensus 45 ~~~~--~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~l 122 (481)
T PRK04366 45 ELPE--VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWL 122 (481)
T ss_pred CCCC--CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHH
Confidence 4565 8999999999887654322 2221111123344566777666541 1233223 3 5668889999999999
Q ss_pred HHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec
Q 010897 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (498)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~ 184 (498)
++++|++. ..+..++|+.+.+.++.+++.... . .|. .++++||++++.|.++...++..|++++.++++
T Consensus 123 a~l~G~~~------~~l~~~~GA~a~~~~l~~~r~~~~-~---~Gd-~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~ 191 (481)
T PRK04366 123 KEITGMDA------VTLQPAAGAHGELTGLLMIRAYHE-A---RGD-TKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN 191 (481)
T ss_pred HHHhCCCc------eEEEeCcHHHHHHHHHHHHHHHhh-c---cCc-CCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC
Confidence 99999973 134444555555444443322110 0 110 024589999999999999999999999999997
Q ss_pred CCccccCHHHHHHHhhhCCeEEEEeeccCCcccc-cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc
Q 010897 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~ 263 (498)
++ +.+|+++|+++++++|++|++++|| ++|.+ +|+++|+++|+++ |+++|||+|+.....+... .
T Consensus 192 ~~-~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~------gal~iVD~a~~~~~~g~~~------~ 257 (481)
T PRK04366 192 ED-GLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA------GGLLYYDGANLNAILGKAR------P 257 (481)
T ss_pred CC-CCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc------CCEEEEEecChhhhcccCC------c
Confidence 54 8899999999999999999999988 89998 5899999999999 9999999999654322221 1
Q ss_pred CCCCeeEEEEcCCccCCCCCC-----eEEEEEeCCCCCCcccccc------cCccCCCCCCc----cccCCCchHHHHHH
Q 010897 264 RLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFH------INYLGSDQPTF----TLNFSKGSSQIIAQ 328 (498)
Q Consensus 264 ~~~~~dsi~~s~hK~l~~p~g-----~g~~~~~~~~~l~~~~~~~------~~yl~~~~~~~----~l~~sr~~~~~~a~ 328 (498)
+..++|++++++|||+++|.| +|+++++++ .. +.+.-. ..|....+... .-.++..+..+++.
T Consensus 258 ~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a 335 (481)
T PRK04366 258 GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRA 335 (481)
T ss_pred cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHH
Confidence 223699999999999987754 568877753 21 111100 01111110000 00123234567888
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec--CCCCCCHHHHHHHHHhcCcEeeeec
Q 010897 329 YYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK--DSSAHTVFEISEGLRKFGWIVPAYT 406 (498)
Q Consensus 329 ~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~--~~~~~~~~~l~~~L~~~G~~v~~~~ 406 (498)
|..+..+|.+|++++.+++.+++++|++.|+++ +++..+.+..+.+.|..+ ...+.+..++.++|.++||.+....
T Consensus 336 ~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~ 413 (481)
T PRK04366 336 YAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIY 413 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccc
Confidence 899999999999999999999999999999987 444333223344444432 1124578899999999998865322
Q ss_pred CCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCccccccccccc
Q 010897 407 MPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHV 458 (498)
Q Consensus 407 ~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~ 458 (498)
.|. .....+|+++++.+|.+++|+|+++|+++.+++.+.++.++.. ||-
T Consensus 414 ~p~--~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~~~~~~~-p~~ 462 (481)
T PRK04366 414 FPL--IVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENPELVKEA-PHN 462 (481)
T ss_pred ccc--ccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCcHhHhhC-CCC
Confidence 221 1234699999999999999999999999999999988776655 654
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=3.7e-30 Score=264.97 Aligned_cols=341 Identities=18% Similarity=0.154 Sum_probs=256.0
Q ss_pred cCCChHHHHHHHHHHhccCCCC-----CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+++.+.+...... +...+.......++++.+++++|.+.+ ..+++|+|+|+++.+++.++..
T Consensus 32 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~~l~~~~~~~~~ 107 (406)
T PRK09295 32 SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA----EELVFVRGTTEGINLVANSWGN 107 (406)
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC----CeEEEeCCHHHHHHHHHHHhhh
Confidence 4456677888888777642211 111234456666789999999998421 2389999999999888776532
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
... ..+++|++++..|.+ |...++..|++++.++++++ +.+|+++|+++++++|++|++++++|+|
T Consensus 108 ~~~---------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~l~~~~n~t 177 (406)
T PRK09295 108 SNV---------RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPALFDERTRLLAITHVSNVL 177 (406)
T ss_pred hcC---------CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCCCHHHHHHhcCCCcEEEEEecchhcc
Confidence 100 024689999988863 56777889999999999865 7899999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
|.+.|+++|.++|+++ +++++||++|+.+..++ ++...++|++++|+|| +++|.|+|+++++++ .
T Consensus 178 G~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~-~ 242 (406)
T PRK09295 178 GTENPLAEMIALAHQH------GAKVLVDGAQAVMHHPV-------DVQALDCDFYVFSGHK-LYGPTGIGILYVKEA-L 242 (406)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEcccccCcccc-------CchhcCCCEEEeehhh-ccCCCCcEEEEEchH-h
Confidence 9999999999999999 99999999998765432 2333358999999999 567899999998753 2
Q ss_pred CCcccccccCccCCC-----------------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010897 296 LPDELVFHINYLGSD-----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 296 l~~~~~~~~~yl~~~-----------------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 358 (498)
+.. +. .+.++. ...|. .|+.+...++++.++++.+...|++++.++..++++++.+.|
T Consensus 243 ~~~-~~---~~~~g~~~~~~~~~~~~~~~~~~~~r~e-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 243 LQE-MP---PWEGGGSMIATVSLTEGTTWAKAPWRFE-AGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred Hhh-CC---CcccCCceeeeeecCCccccCCchhhcC-CCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 111 11 111110 01111 367777788999999999888889899999999999999999
Q ss_pred hcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC-----CCCeeEEEEeecCCCCHHHHHHH
Q 010897 359 EKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN-----AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
+++++++++.+....++++|.+++ .+..++.+.|.++||.++....... .....++|+|++..+|.+|+|+|
T Consensus 318 ~~~~~~~~~~~~~~~~iv~~~~~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l 394 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGVIAFNLGK---HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRL 394 (406)
T ss_pred hcCCCEEEeCCCCCceEEEEEECC---cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHH
Confidence 999889988764457899998853 4667899999999998864322110 01124799999999999999999
Q ss_pred HHHHHHHHH
Q 010897 434 ISHIEEVLK 442 (498)
Q Consensus 434 ~~~l~~~l~ 442 (498)
++.|+++..
T Consensus 395 ~~~l~~i~~ 403 (406)
T PRK09295 395 VAGLQRIHR 403 (406)
T ss_pred HHHHHHHHH
Confidence 999988754
No 25
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-30 Score=284.05 Aligned_cols=426 Identities=15% Similarity=0.138 Sum_probs=294.6
Q ss_pred CCHHHHHHHHHHhhhccCC---CCCcccccccCCChHHHHHHHHHH---hccCCCCC-cCCcchHHHHHHHHHHHHHHcC
Q 010897 37 MPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVMAS---INKNYVDM-DEYPVTTELQNRCVNMIAHLFN 109 (498)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~l~~~---~~~n~~~~-~~~~~~~~le~~~~~~la~l~g 109 (498)
.+..++++.++.+-..+-. ..+.+++ ++....|.+.+.+... .+-.++.+ +.+++..+++.++.+|+++++|
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG 556 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG 556 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4888999999887654421 1233444 6666666665544322 11122333 3455788999999999999999
Q ss_pred CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccc
Q 010897 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (498)
Q Consensus 110 ~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~ 189 (498)
++. .....+||+++++.++++++.. ... .|. .++.+|++|+..|.+..+.+..+|++++.|+++++ +.
T Consensus 557 ~d~------~sl~~~~ga~ge~agL~a~r~~-~~~---~G~-~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~-G~ 624 (954)
T PRK05367 557 YDA------VSLQPNAGAQGEYAGLLAIRAY-HES---RGE-GHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN-GN 624 (954)
T ss_pred CCC------EEECccHHHHHHHHHHHHHHHH-hhc---cCC-CCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC-CC
Confidence 973 2444668888888877666542 111 121 12457999999999999999999999999999864 78
Q ss_pred cCHHHHHHHhhh---CCeEEEEeeccCCcccc-cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC
Q 010897 190 MNPVKAVELVDE---NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (498)
Q Consensus 190 ~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~ 265 (498)
+|+++|++++++ ++.+|++++|++. |.+ +|+++|+++|+++ |+++|||+|+.+...++..| +.
T Consensus 625 iD~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~------G~~v~VDgA~~~al~~l~~p------g~ 691 (954)
T PRK05367 625 IDLDDLRAKAEEHADNLAAIMITYPSTH-GVFEETIREICEIVHEH------GGQVYLDGANMNAQVGLARP------GD 691 (954)
T ss_pred cCHHHHHHHHhccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHc------CCEEEEECcChhhccCCCCh------hh
Confidence 999999999976 4678889999887 655 8999999999999 99999999997654433322 12
Q ss_pred CCeeEEEEcCCccCCCCCC-----eEEEEEeCCCCCCcccccccCccCCCCCCcc-ccCCCc--hHHHHHHHHHHHHhcH
Q 010897 266 PLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFHINYLGSDQPTFT-LNFSKG--SSQIIAQYYQFIRLGF 337 (498)
Q Consensus 266 ~~~dsi~~s~hK~l~~p~g-----~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~-l~~sr~--~~~~~a~~~~l~~lg~ 337 (498)
.++|++.+++|||++.|.| +|.+.++. .+...++-...-........+ ...+.. +..+...|+.++.+|.
T Consensus 692 ~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~--~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~ 769 (954)
T PRK05367 692 IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA--HLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGA 769 (954)
T ss_pred cCCCEEEecCcccCCCCcCCCCCceEEEeecc--cccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCH
Confidence 3699999999999876665 66888874 222221111100000000001 111111 1344568888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC---CCccEEEEEecC---CCCCCHHHHHHHHHhcCcEeeeecCCCCC
Q 010897 338 EGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAFSLKD---SSAHTVFEISEGLRKFGWIVPAYTMPANA 411 (498)
Q Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~~---~~~~~~~~l~~~L~~~G~~v~~~~~~~~~ 411 (498)
+|++++.+....+++|+.+.|++. +++.... ...+-++|+++. ..+.+..+++++|.+.|+..+....|
T Consensus 770 ~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~p--- 844 (954)
T PRK05367 770 EGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFP--- 844 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCc---
Confidence 999999999999999999999874 4443321 124445555531 22456789999999999987653222
Q ss_pred CCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc--------Ccccccccccccccccccc-cC-CCcccccccccc--
Q 010897 412 ENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES--------LPSRVSTKTAHVIPMVNET-QG-DKPLKKSVRETQ-- 479 (498)
Q Consensus 412 ~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~--------~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-- 479 (498)
..+.+||++++..+.+|+|+|+++|+.+.+++++ .++.++.. ||. +..-++ +| ..+|++.+..+.
T Consensus 845 -v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~~~~~~~~~~a-p~~-~~~~~~~~w~~~y~r~~~~~p~~~ 921 (954)
T PRK05367 845 -VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEWPAEDNPLKNA-PHT-AADLVADEWDHPYSREQAAFPLPS 921 (954)
T ss_pred -cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchhhhC-CCC-HHHhccCCCCCCCCHHHhcCCCcc
Confidence 2456999999999999999999999999999988 45555555 776 222232 55 467777766554
Q ss_pred cchhhhhhhhcc-----cccccCC
Q 010897 480 EEVTRHWKRFVK-----GRRAGAC 498 (498)
Q Consensus 480 ~~~~~~~~~~~~-----~~~~~~~ 498 (498)
....+||+.+.+ |++|.||
T Consensus 922 ~~~~k~~~~~~r~~~~~gd~~~~c 945 (954)
T PRK05367 922 LRANKYWPPVGRIDNVYGDRNLVC 945 (954)
T ss_pred cccCCcCCCcCcccccccceeeec
Confidence 234689998886 9999999
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=5e-30 Score=261.47 Aligned_cols=338 Identities=17% Similarity=0.131 Sum_probs=253.9
Q ss_pred CChHHHHHHHHHHhccCCC--CCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYV--DMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~--~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
++++.+.+.+.+.+..+.. .+..++ .......++++++++++|.+.. ..+.+|+|+++++.+++.+..++
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~~- 85 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS----AHVVFTNNATTALNIALKGLLKE- 85 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHhccCC-
Confidence 4556788888777765431 122222 2345666888999999998642 13889999999998877664221
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
+++|+++...|.++. ..++..|++++.++++++ +.+|+++++++++++|++|++++++|+||.
T Consensus 86 ------------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 86 ------------GDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GLISPERIKRAIKTNTKLIVVSHASNVTGT 152 (376)
T ss_pred ------------CCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHhcCCCCeEEEEECCCCCccc
Confidence 468999999998754 456667999999998764 789999999999989999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
+.|+++|.++|+++ +++++||+|++.+..++ ++...++|++.+++|||+++|.|+|++++++...+.
T Consensus 153 ~~~~~~i~~l~~~~------~~~livD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 153 ILPIEEIGELAQEN------GIFFILDAAQTAGVIPI-------DMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLK 219 (376)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhccCccCC-------CchhcCCCEEEecccccccCCCCceEEEEcCCcCcC
Confidence 99999999999999 99999999998776543 233357999999999999999999999988765321
Q ss_pred cccccc----cCccCCC---CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC
Q 010897 298 DELVFH----INYLGSD---QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (498)
Q Consensus 298 ~~~~~~----~~yl~~~---~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (498)
...... ..+.... ...|. .++.+...++++..+++.+...|++.+.++..++++++.+.|++.++++++.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 298 (376)
T TIGR01977 220 PLKSGGTGSHSALIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPA 298 (376)
T ss_pred ceecCCCccccccccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC
Confidence 111000 0011000 00111 246666778888889999988999999999999999999999998889988642
Q ss_pred ---CCccEEEEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCC-------CCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 371 ---VGVPLVAFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPA-------NAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 371 ---~~~~~v~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~-------~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
...++++|.+++ .+..++.+.|.++ |+.+....... .......+|++++..+|.++++++++.|++
T Consensus 299 ~~~~~~~~v~~~~~~---~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 299 DPANRVGVVSFTVEG---IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CccccCCeEEEEECC---CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 146789998843 5778999999987 98875432110 012345799999999999999999988875
No 27
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=4.4e-30 Score=260.55 Aligned_cols=328 Identities=16% Similarity=0.097 Sum_probs=243.4
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcC-----CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+++.+.+......+.. .....++.+++++.+++++|.+.+ .+++|+|+|+++++++.++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-----EIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 4456677888887776543322221 234466677889999999998753 389999999999998877644
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHH---HcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~---~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
.+. ..+++|+++...|.++...+. ..|++++.++++++ +.+|+++++++|+++|++|++++++|+||
T Consensus 83 ~~~---------~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~v~~~~n~tG 152 (364)
T PLN02651 83 FYK---------DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD-GLVDLDELAAAIRPDTALVSVMAVNNEIG 152 (364)
T ss_pred hcc---------CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEECCCCCce
Confidence 211 124689999999987655443 46889999998764 78999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ |+++|||++++.+..|+ ++...++|++++++||| ++|.|+|+++++++..
T Consensus 153 ~~~~l~~I~~~~~~~------g~~~~vD~a~~~g~~~~-------~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~- 217 (364)
T PLN02651 153 VIQPVEEIGELCREK------KVLFHTDAAQAVGKIPV-------DVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPR- 217 (364)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhhCCccc-------CcccCCCCEEEechhhh-CCCCceEEEEEcCCCC-
Confidence 999999999999999 99999999998776544 33334689999999998 6899999999987532
Q ss_pred CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeeCC--C-C
Q 010897 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGRFEILSKD--V-G 372 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~--~-~ 372 (498)
.. ..+.+.++.+....-.|+.+...++++.++++.+... .+++.++..++++++.+.|++ +++++++.+. . .
T Consensus 218 ~~---l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~ 293 (364)
T PLN02651 218 VR---LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKR 293 (364)
T ss_pred CC---CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccC
Confidence 11 1222233222111124788878889999999888654 488889999999999999986 6789998752 1 2
Q ss_pred -ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecC--CCC--------------CCCeeEEEEeecCCCCHHHHH
Q 010897 373 -VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTM--PAN--------------AENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 373 -~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~--~~~--------------~~~~~~lRv~v~~~~t~~~~~ 431 (498)
.++++|.++ +.+..++.++|.+ +.++.... +.. ....+.+|+|++..+|.+|+|
T Consensus 294 ~~~i~~~~~~---~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 294 YPGTLNLSFA---YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCEEEEEeC---CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 459999885 3677899999965 66643321 110 012368999999999988764
No 28
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=2e-29 Score=257.52 Aligned_cols=345 Identities=14% Similarity=0.080 Sum_probs=248.2
Q ss_pred cCCChHHHHHHHHHHhccCCCCCc---CCc--chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMD---EYP--VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~---~~~--~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+++.+.++..+..+. .++ ....+++ .+..+++.+|...+ ..+++|+|+++++.+++.++..
T Consensus 8 ~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~----~~i~~t~g~teal~~~~~~~~~ 82 (382)
T TIGR03403 8 TTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAE-ALDKLYKGINARDL----DDIIITSCATESNNWVLKGVYF 82 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCC----CeEEEeCCHHHHHHHHHHHHHH
Confidence 456667899998888765333322 122 2334443 44445556666321 2389999999999988887632
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHHH---HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~---~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
... ...++++|+++...|+++... ++..|++++.+|++++ +.+|+++|+++++++|++|++++++|+||
T Consensus 83 ~~~-------~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~tG 154 (382)
T TIGR03403 83 DEI-------LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTITAEQVREAITEKTALVSVMWANNETG 154 (382)
T ss_pred hhc-------ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCCCHHHHHHhcccCCeEEEEEcccCCCc
Confidence 100 000135799999888877655 4557999999999865 78999999999998999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ |+++|+|++++.+..|+ ++...++|++++++||| ++|+|+|++++|+...+
T Consensus 155 ~~~~~~~I~~la~~~------g~~~ivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~ 220 (382)
T TIGR03403 155 MIFPIKEIGEICKER------GVLFHTDAVQAIGKIPV-------DVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL 220 (382)
T ss_pred cccCHHHHHHHHHHc------CCEEEEechhhcCCCcc-------CccccCCCEEEEcchhh-CCCCceEEEEECCCCCC
Confidence 999999999999999 99999999988654332 23334699999999998 57999999998865322
Q ss_pred CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-C-cc
Q 010897 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-G-VP 374 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~-~~ 374 (498)
.+.+.+.....-...|+.+...++++..+++.+. +.++...++..+++++|.+.|+++++++++.+.. . .+
T Consensus 221 ------~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR03403 221 ------TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPN 293 (382)
T ss_pred ------CCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCC
Confidence 1112111111101126666666667777776553 4567778888899999999999998899886532 2 45
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCC--CCC--------------CCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMP--ANA--------------ENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~--~~~--------------~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
+++|.+++ .+...+...|.++|+.++..... ... .....+|+|++..+|.+|+|+|++.|+
T Consensus 294 ~~~~~~~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~ 370 (382)
T TIGR03403 294 TILISIKG---VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFK 370 (382)
T ss_pred EEEEEeCC---CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHH
Confidence 88888743 56778888999999999753211 100 013679999999999999999999999
Q ss_pred HHHHHHHc
Q 010897 439 EVLKEIES 446 (498)
Q Consensus 439 ~~l~~l~~ 446 (498)
+++++++.
T Consensus 371 ~~~~~~~~ 378 (382)
T TIGR03403 371 KAVQRLRA 378 (382)
T ss_pred HHHHHHHh
Confidence 99987764
No 29
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=7.9e-30 Score=259.74 Aligned_cols=337 Identities=17% Similarity=0.137 Sum_probs=247.9
Q ss_pred CChHHHHHHHHHHhccCCCCC-----cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
++++.+.+++.+.+...+..+ ...+.......++++++++++|.+.+ ..+++|+|+++++.+++.++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP----DEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCCHHHHHHHHHHHhhhcC
Confidence 445667777766654322211 12244566667888999999998722 238899999999999888875410
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
..+++|++++++|++ +...++..|++++.|+++++ +.+|++++++.+++++++|++++++|+||.
T Consensus 86 ----------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 86 ----------KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD-GQLDLEALEKLLTERTKLVAVTHVSNVLGT 154 (373)
T ss_pred ----------CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC-CCcCHHHHHHHhcCCceEEEEeCcccccCC
Confidence 014689999999987 45567788999999999854 789999999999989999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
+.|+++|.++|+++ +++||+|++++.+..++ ++...++|++++++|||+++ .|+|+++.++. .+.
T Consensus 155 ~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~ 219 (373)
T cd06453 155 INPVKEIGEIAHEA------GVPVLVDGAQSAGHMPV-------DVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLE 219 (373)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhhcCceee-------eccccCCCEEEeccccccCC-CCcEEEEEchH-Hhh
Confidence 99999999999999 99999999998665433 22223689999999999877 89999887653 221
Q ss_pred cccccccCc-------cCC-C----CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 298 DELVFHINY-------LGS-D----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 298 ~~~~~~~~y-------l~~-~----~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
........+ ... . ...+. .++.+...+++++.+++.+...+++++.++..++++++.+.|+++++++
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 220 EMPPYGGGGEMIEEVSFEETTYADLPHKFE-AGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred cCCCeecCCCccccccccccccCCCccccC-CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 111100000 000 0 00111 1455566788899999999888999999999999999999999998899
Q ss_pred EeeCC-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCC-----CCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 366 ILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPA-----NAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 366 ~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~-----~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
++.++ ...++++|.+++ .+..++.++|.++|+.+....... ......++|++++..+|.+++|+|++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 299 VYGDAEDRAGVVSFNLEG---IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeCCccccCCeEEEEECC---cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 87543 246788888743 577799999999999875432110 0112457999999999999999988754
No 30
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.98 E-value=4.1e-29 Score=257.10 Aligned_cols=342 Identities=17% Similarity=0.110 Sum_probs=251.7
Q ss_pred CChHHHHHHHHHHhccCCCCCc--C---CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMD--E---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~--~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
++++.+.+++.+.+......+. . .+.......++++.+++++|.+.+ ..+++|+|+++++.+++.++....
T Consensus 29 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~----~~v~~~~g~t~~l~~~~~~~~~~~ 104 (403)
T TIGR01979 29 QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD----EEIVFTRGTTESINLVAYSWGDSN 104 (403)
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHHhhhhc
Confidence 4556677888777654322211 1 123344556788999999999732 138999999999887777653210
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
. ..+++|+++++.|.+ |..+++..|++++.++++++ +.+|++++++.++++|++|++++++|+||.
T Consensus 105 ~---------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 105 L---------KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD-GTLDLDDLEKLLTEKTKLVAITHVSNVLGT 174 (403)
T ss_pred C---------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC-CCCCHHHHHHHhccCCeEEEEEcccccccc
Confidence 0 024689999998875 55677889999999999864 789999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
+.|+++|.++|+++ |+++|+|++|+.+..++ ++...++|+++.++||++ +|.|+|+++++.. .+
T Consensus 175 ~~~~~~i~~~~~~~------~~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~-~~- 238 (403)
T TIGR01979 175 VNPVEEIAKLAHQV------GAKVLVDGAQAVPHMPV-------DVQALDCDFYVFSGHKMY-GPTGIGVLYGKEE-LL- 238 (403)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEchhhcCcccc-------CccccCCCEEEEeccccc-CCCCceEEEEchH-HH-
Confidence 99999999999999 99999999998765332 222235899999999975 6899999987653 22
Q ss_pred cccccccCccCCC---------------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 298 DELVFHINYLGSD---------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (498)
Q Consensus 298 ~~~~~~~~yl~~~---------------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (498)
+.+. +.+.++. ...|. .|+.+...++++..+++.+...|..++.++..++++++.+.|++++
T Consensus 239 ~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 315 (403)
T TIGR01979 239 EQMP--PFLGGGEMIAEVSFEETTYNEAPHKFE-AGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIP 315 (403)
T ss_pred hcCC--CeecCCCceeecccCccccCCChhhcC-CCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111 0000000 00111 2566666778888888888777888899999999999999999998
Q ss_pred CeEEeeCCC---CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCC-----CCCCeeEEEEeecCCCCHHHHHHHH
Q 010897 363 RFEILSKDV---GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPA-----NAENVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 363 ~~~~~~~~~---~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~-----~~~~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
+++++.+.. ..++++|.+++ .+..++.+.|.++|+.+....... ......++|+|++..+|.+|+++|+
T Consensus 316 g~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~ 392 (403)
T TIGR01979 316 GLRIYGPRDAEDRGGIISFNVEG---VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALV 392 (403)
T ss_pred CEEEeCCCCccccCceEEEEeCC---cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHH
Confidence 899886531 46899998853 456789999999999876422100 0011357999999889999999999
Q ss_pred HHHHHHHHHH
Q 010897 435 SHIEEVLKEI 444 (498)
Q Consensus 435 ~~l~~~l~~l 444 (498)
+.|+++++.+
T Consensus 393 ~~l~~~~~~~ 402 (403)
T TIGR01979 393 EALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 31
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=2.8e-29 Score=259.85 Aligned_cols=349 Identities=17% Similarity=0.095 Sum_probs=254.6
Q ss_pred CCChHHHHHHHHHHhccCCCCC---cCC--cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 66 TWMEPECDKLVMASINKNYVDM---DEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 66 ~~~~~~~~~~l~~~~~~n~~~~---~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
+++++.+.+++.+.+......+ ..+ .......+++++.+++++|.+.+ ..+++|+|+|+++.+++.++...
T Consensus 42 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~al~~i~~~~~~~ 117 (424)
T PLN02855 42 SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS----REIVFTRNATEAINLVAYTWGLA 117 (424)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEeCCHHHHHHHHHHHhhhh
Confidence 3455668888877665432221 111 22344456888999999999632 13999999999998777653210
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
. . ..+++|+++.+.|.+ |...++..|++++.++++++ +.+|++++++.++++|++|++++++|+||
T Consensus 118 ~--------~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~~~n~tG 187 (424)
T PLN02855 118 N--------L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSEKTKLVATHHVSNVLG 187 (424)
T ss_pred c--------C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhccCceEEEEeCcccccc
Confidence 0 0 014689999987764 56677888999999999765 56999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ |+++++|++|+.+..++ ++...++|++.+++|| +++|.|+|++++++. .+
T Consensus 188 ~~~~~~~I~~l~~~~------g~~vivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~-~~ 252 (424)
T PLN02855 188 SILPVEDIVHWAHAV------GAKVLVDACQSVPHMPV-------DVQTLGADFLVASSHK-MCGPTGIGFLWGKSD-LL 252 (424)
T ss_pred ccCCHHHHHHHHHHc------CCEEEEEhhhhcCCcCC-------CchhcCCCEEEeeccc-ccCCCccEEEEEchh-hh
Confidence 999999999999999 99999999997554332 2322358999999999 467999999998753 22
Q ss_pred Cccccccc-------CccCC-----CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010897 297 PDELVFHI-------NYLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRF 364 (498)
Q Consensus 297 ~~~~~~~~-------~yl~~-----~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (498)
....+... .|... ....|. .||.+...++++.++++.+...|+.++.++..++++++.+.|++++++
T Consensus 253 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 331 (424)
T PLN02855 253 ESMPPFLGGGEMISDVFLDHSTYAPPPSRFE-AGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGV 331 (424)
T ss_pred hcCCCEecCCCceeeeecCccccCCChhhcc-CCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 11100000 00000 011122 367777778888899988877899999999999999999999999889
Q ss_pred EEeeCC-----CCccEEEEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCCC-----CCCeeEEEEeecCCCCHHHHHHH
Q 010897 365 EILSKD-----VGVPLVAFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPAN-----AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 365 ~~~~~~-----~~~~~v~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
+++.+. .+.++++|.+++ .+..++.+.|.++ |+.++....... ..-..++|+|++..+|.+|+++|
T Consensus 332 ~i~~~~~~~~~~r~~~v~~~~~~---~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l 408 (424)
T PLN02855 332 RIYGPKPSEGVGRAALCAFNVEG---IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF 408 (424)
T ss_pred EEeCCCcccccCcccEEEEEECC---cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence 998642 245799999853 4667899999887 988865332110 01125799999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 010897 434 ISHIEEVLKEIESL 447 (498)
Q Consensus 434 ~~~l~~~l~~l~~~ 447 (498)
++.|+++++.++..
T Consensus 409 ~~~l~~~~~~~~~~ 422 (424)
T PLN02855 409 IHALKDTIAFFSSF 422 (424)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998776543
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.3e-28 Score=252.96 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=245.3
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcCC-----cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDEY-----PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~~-----~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+++...+...+..+... ....+..+++++.+++++|.+++ .+++|+|+|+++.+++.++..
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 12 TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-----EIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 44567778888877765433322211 12234556788999999998753 389999999999988877643
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHH---HcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~---~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
.+. ..+++|+++..+|.++...++ ..|++++.++++++ +.+|++++++++++++++|++++++|+||
T Consensus 87 ~~~---------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~v~~~~n~tG 156 (402)
T TIGR02006 87 FYK---------SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLIDLEELKAAIRDDTILVSIMHVNNEIG 156 (402)
T ss_pred hhc---------CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECCCcCce
Confidence 110 024689999999998776653 45999999998864 78999999999998999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ |+++|||++++.+..|+ ++...++|++++++||+ ++|.|+|+++++++...
T Consensus 157 ~~~~~~~I~~l~~~~------g~~livD~a~a~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~ 222 (402)
T TIGR02006 157 VIQDIAAIGEICRER------KVFFHVDAAQSVGKIPI-------NVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRV 222 (402)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhcCCccc-------CccccCCCEEEEehhhh-cCCCceEEEEEccCCCC
Confidence 999999999999999 99999999998765443 23234699999999996 57999999999865322
Q ss_pred CcccccccCccCCCCC-CccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-Ccc
Q 010897 297 PDELVFHINYLGSDQP-TFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVP 374 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~-~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~ 374 (498)
. ..+.+.++... .+. .|+.+...++++..+++.+. +++.++.++..++++++.+.|+++++++++.+.. ..+
T Consensus 223 -~---~~~~~~g~~~~~~~~-~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p 296 (402)
T TIGR02006 223 -R---LEALIHGGGHERGMR-SGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP 296 (402)
T ss_pred -C---CCceecCCCccCCcc-CCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 1 11111222111 121 26666667777778887664 4678888999999999999999998888775432 232
Q ss_pred -EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecC--CCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 375 -LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTM--PAN--------------AENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 375 -~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~--~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
++.|.++. .+...+...| +++.++.... +.. .....++|+|++..+|.+|+|+|++.|
T Consensus 297 ~~~~v~f~~---~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l 371 (402)
T TIGR02006 297 GNLNVSFNY---VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLV 371 (402)
T ss_pred CeEEEEEeC---cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHH
Confidence 22333322 2345666666 3665543321 110 012368999999999999999999999
Q ss_pred HHHHHHHHc
Q 010897 438 EEVLKEIES 446 (498)
Q Consensus 438 ~~~l~~l~~ 446 (498)
+++++.++.
T Consensus 372 ~~~~~~~~~ 380 (402)
T TIGR02006 372 KSAIDKLRE 380 (402)
T ss_pred HHHHHHHHh
Confidence 999987765
No 33
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=9.2e-29 Score=270.70 Aligned_cols=421 Identities=13% Similarity=0.103 Sum_probs=295.9
Q ss_pred CCHHHHHHHHHHhhhcc---CCCCCcccccccCCChHHHHHHHHHH---hccCCCCCc-CCcchHHHHHHHHHHHHHHcC
Q 010897 37 MPKEAAYQVINDELMLD---GNPRLNLASFVTTWMEPECDKLVMAS---INKNYVDMD-EYPVTTELQNRCVNMIAHLFN 109 (498)
Q Consensus 37 ~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~l~~~---~~~n~~~~~-~~~~~~~le~~~~~~la~l~g 109 (498)
.+..++++.++.+-..+ -+..+.|+| +|.-..|.+.+..... .+..++.+. ..++..++-.++++++++++|
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~~~plgs-ctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g 582 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHSMIPLGS-CTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITG 582 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccCCccCcc-cccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57788888887654322 122233333 2333345444443322 222344332 344778888999999999999
Q ss_pred CCCCCCCCcceeeecChh----HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC
Q 010897 110 TPVADDKTAVGVGTVGSS----EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE 185 (498)
Q Consensus 110 ~~~~~~~~~~~~~t~g~s----ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~ 185 (498)
++. +.++.+++ +++++++++..+. .|.. ++.+||+|...|.+....+...|++++.||+++
T Consensus 583 ~~~-------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd~-~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~ 647 (993)
T PLN02414 583 FDS-------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGDH-HRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDA 647 (993)
T ss_pred CCe-------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCCC-CCCEEEeCCCcCccCHHHHHHCCCEEEEeccCC
Confidence 954 88888888 8888888887432 1211 245899999999999999999999999999986
Q ss_pred CccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc
Q 010897 186 GYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (498)
Q Consensus 186 ~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~ 262 (498)
+ +.+|+++|+++|++ +|++|+++++||..|..+|+++|+++|+++ |++++||+|+.-....+..|
T Consensus 648 ~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~------Galv~vDgAq~~a~~~l~~p----- 715 (993)
T PLN02414 648 K-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN------GGQVYMDGANMNAQVGLTSP----- 715 (993)
T ss_pred C-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc------CCEEEEEecCHHhccCcCCc-----
Confidence 5 78999999999984 789999999999999999999999999999 99999999995543222221
Q ss_pred cCCCCeeEEEEcCCccCCCCC-----CeEEEEEeCCCCCCcccccc-----cCccCCCCCCccccCCCc------hHHHH
Q 010897 263 FRLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVFH-----INYLGSDQPTFTLNFSKG------SSQII 326 (498)
Q Consensus 263 ~~~~~~dsi~~s~hK~l~~p~-----g~g~~~~~~~~~l~~~~~~~-----~~yl~~~~~~~~l~~sr~------~~~~~ 326 (498)
+..++|++.+++||++++|. |+|++.++.. +...++-. ..++.... + ..-|+.. +..++
T Consensus 716 -~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~lPg~~v~~~~~~~~r~~-~-s~iGt~~~a~~g~al~l~ 790 (993)
T PLN02414 716 -GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVPTGGIPRPEK-T-QPLGTISAAPWGSALILP 790 (993)
T ss_pred -cccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcccCCCCccccCCCcccccC-C-CCcCCccchhhhhHHHHH
Confidence 22369999999999888665 4899987762 22222211 01111111 1 1114422 24556
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC---CCccEEEEEec---CCCCCCHHHHHHHHHhcCc
Q 010897 327 AQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAFSLK---DSSAHTVFEISEGLRKFGW 400 (498)
Q Consensus 327 a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~---~~~~~~~~~l~~~L~~~G~ 400 (498)
..|..+..+|.+|+++..++...+++|+.+.|++. +.+.... ..++-+.+.++ ...+.+..+++++|.+.|+
T Consensus 791 ~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gi 868 (993)
T PLN02414 791 ISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGF 868 (993)
T ss_pred HHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh--CCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCc
Confidence 77788899999999999999999999999999874 3433321 12333444443 1224677899999999998
Q ss_pred EeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc--------Ccccccccccccccccccc-cC-CCc
Q 010897 401 IVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES--------LPSRVSTKTAHVIPMVNET-QG-DKP 470 (498)
Q Consensus 401 ~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~--------~~~~~~~~~~~~~~~~~~~-~~-~~~ 470 (498)
..+....| ....+||+.++..+.+|+|+|+++|..+.+++++ .++.++.. ||. +.+-++ +| +.+
T Consensus 869 hapt~~~p----v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~~~~~~~l~~a-p~~-~~~~~~~~w~~~y 942 (993)
T PLN02414 869 HAPTMSWP----VPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKADRENNVLKGA-PHP-PSLLMADKWDKPY 942 (993)
T ss_pred EEeeeccc----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhcC-CCC-hHHhhcCCCCCCc
Confidence 87553222 3567999999999999999999999999999987 45555555 776 333232 46 567
Q ss_pred cccccccccc--chhhhhhhhcc-----cccccCC
Q 010897 471 LKKSVRETQE--EVTRHWKRFVK-----GRRAGAC 498 (498)
Q Consensus 471 ~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~ 498 (498)
|++.+..+.. ...+||+.+.+ |++|.||
T Consensus 943 ~r~~a~~p~~~~~~~k~~~~v~r~d~~~gd~~l~c 977 (993)
T PLN02414 943 SREYAAFPAPWVRASKFWPTTGRVDNVYGDRNLVC 977 (993)
T ss_pred ChhhccCCCcccccCccCCCccccccccccccccc
Confidence 8877765542 34689998886 9999999
No 34
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=1.8e-28 Score=250.47 Aligned_cols=339 Identities=14% Similarity=0.114 Sum_probs=245.8
Q ss_pred cCCChHHHHHHHHHHhccCCCCCc----CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
++++++.+.+++.+.+...+..+. .......+.+++++.+++++|.+++ .+++|+|+++++.+++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-----GIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCcHHHHHHHHHHHHHHh
Confidence 445667788888877754322221 2234456677899999999998653 3889999999999888777542
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHH---HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~---~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
+ ...+++|+++...|.++... ++..|++++.++++++ +.+|+++|++.+++++++|++++++|+||.
T Consensus 84 ~---------~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (381)
T PRK02948 84 L---------PQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GLIRLVDLERAITPDTVLASIQHANSEIGT 153 (381)
T ss_pred c---------cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CCCCHHHHHHhcCCCCEEEEEECCcCCcEe
Confidence 1 01246899999899876654 4567999999999864 789999999999988999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
+.|+++|.++|+++ ++++|||++++.+..++ ++...++|++..++||+ ++|.|+|++++++...+.
T Consensus 154 ~~~~~~I~~l~~~~------~~~vivD~~~~~g~~~~-------~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~ 219 (381)
T PRK02948 154 IQPIAEIGALLKKY------NVLFHSDCVQTFGKLPI-------DVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWK 219 (381)
T ss_pred ehhHHHHHHHHHHc------CCEEEEEChhhcccccc-------CcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCC
Confidence 99999999999999 99999999886543332 22233589999999997 469999999987542111
Q ss_pred cccccccCccCC-CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC--CC-C-
Q 010897 298 DELVFHINYLGS-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK--DV-G- 372 (498)
Q Consensus 298 ~~~~~~~~yl~~-~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~-~- 372 (498)
. .+.+. ....+ ..++.+...++++.++++.+. +...+..++..++++++.+.|++++ +++... +. .
T Consensus 220 ~------~~~~~~~~~~~-~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~ 290 (381)
T PRK02948 220 P------VFPGTTHEKGF-RPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCL 290 (381)
T ss_pred C------cccCCCCCCCc-CCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCc
Confidence 1 01011 11111 125555666777777776653 4567888999999999999999986 554432 11 2
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecC-------CC---------CCCCeeEEEEeecCCCCHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTM-------PA---------NAENVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~-------~~---------~~~~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
..++.|.+++ .+..++...|.++|+.++.... |. ......++|++++..+|.+|++++++.
T Consensus 291 ~~i~~~~~~~---~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~ 367 (381)
T PRK02948 291 PHIIGVTIKG---IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHA 367 (381)
T ss_pred CCEEEEEeCC---CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHH
Confidence 2467777643 4667888899999999875331 10 001246899999999999999999999
Q ss_pred HHHHHHHH
Q 010897 437 IEEVLKEI 444 (498)
Q Consensus 437 l~~~l~~l 444 (498)
|+++++.+
T Consensus 368 l~~~~~~~ 375 (381)
T PRK02948 368 LETIGNQF 375 (381)
T ss_pred HHHHHHHH
Confidence 99987654
No 35
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=9.9e-29 Score=253.81 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=244.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCC-cCC---cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDM-DEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~-~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
++++++.+.+++.+.+......+ ..+ ....++.+++++.+++++|.+.+ .+++++|+++++.+++.++...
T Consensus 26 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-----~v~~~~~~t~~l~~~~~~~~~~ 100 (397)
T TIGR01976 26 GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-----EVVFGANATSLTFLLSRAISRR 100 (397)
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-----eEEEeCCHHHHHHHHHHHHHhc
Confidence 44566778888887775432211 122 24456677899999999998752 3888999999987766665322
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
+ ..+++|+++++.|.+ |...++..|++++.++++++++.+|+++++++++++|++|++++++|+||
T Consensus 101 ~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG 170 (397)
T TIGR01976 101 W----------GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLG 170 (397)
T ss_pred C----------CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCC
Confidence 1 024689999998875 44667889999999999764478999999999998999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ |+++++|++++.+..++ ++...++|++++++|||++ + ++|+++++++ .+
T Consensus 171 ~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~g-~-~~G~l~~~~~-~~ 234 (397)
T TIGR01976 171 SIVDLAAITELVHAA------GALVVVDAVHYAPHGLI-------DVQATGADFLTCSAYKFFG-P-HMGILWGRPE-LL 234 (397)
T ss_pred ccCCHHHHHHHHHHc------CCEEEEehhhhccccCC-------CHHHcCCCEEEEechhhcC-C-ceEEEEEcHH-HH
Confidence 999999999999999 99999999986543221 2222358999999999974 3 4898887653 22
Q ss_pred CcccccccCccCCC-CCCccccCCCchHHHHHHHHHHHHhcHHH--------------HHHHHHHHHHHHHHHHHHHhcC
Q 010897 297 PDELVFHINYLGSD-QPTFTLNFSKGSSQIIAQYYQFIRLGFEG--------------YKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 297 ~~~~~~~~~yl~~~-~~~~~l~~sr~~~~~~a~~~~l~~lg~~g--------------~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
.........|.... ...|. .|+++...++++..+++.+...| ++++.++..++++++.+.|+++
T Consensus 235 ~~l~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 313 (397)
T TIGR01976 235 MNLPPYKLTFSYDTGPERFE-LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL 313 (397)
T ss_pred hhCCCccccCccCCCcchhc-CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111111222111 11122 36777677788888887764443 5677888888999999999999
Q ss_pred CCeEEeeC---CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCC--------CCCCCeeEEEEeecCCCCHHHH
Q 010897 362 GRFEILSK---DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMP--------ANAENVAVLRVVVREDFSRSLV 430 (498)
Q Consensus 362 ~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~--------~~~~~~~~lRv~v~~~~t~~~~ 430 (498)
++++++.+ ....+++.|.+++ .+..++.++|.++|+.++..... .......++|++++..+|.+|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 390 (397)
T TIGR01976 314 PGVTLYGVARLAARVPTVSFTVHG---LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEV 390 (397)
T ss_pred CCEEEeCCCCccCCCceEEEEeCC---cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHH
Confidence 88998765 1257888888743 46678999999999998754221 1112346799999999999999
Q ss_pred HHHHHHH
Q 010897 431 ERLISHI 437 (498)
Q Consensus 431 ~~l~~~l 437 (498)
++|++.|
T Consensus 391 ~~l~~~l 397 (397)
T TIGR01976 391 DRLLEAL 397 (397)
T ss_pred HHHHHhC
Confidence 9888754
No 36
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=5.2e-28 Score=246.13 Aligned_cols=335 Identities=19% Similarity=0.126 Sum_probs=251.1
Q ss_pred cCCChHHHHHHHHHHhcc---CC--CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINK---NY--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~---n~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
++++++.+.+.+.+.+.. |+ ..+..+....++-+++++.+++++|.+++ ..++++.++|+++..++..+..
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~----~~v~~~~~~t~a~~~~~~~l~~ 83 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD----EEVVFTSNGTEALNAVASSLLN 83 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT----EEEEEESSHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc----cccccccccchhhhhhhhcccc
Confidence 445677788888777554 22 12233445677778999999999999872 2388999999999888888854
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
.+. .+++|++....|++.. ..++..|++++.++.+.+ ..+|+++++++|+++|++|++++.+|.+
T Consensus 84 ~~~----------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~~~~~~~~~~~l~~~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 84 PLK----------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-GSLDLEDLEEALNPDTRLVSISHVENST 152 (371)
T ss_dssp HGT----------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-SSCSHHHHHHHHHTTESEEEEESBETTT
T ss_pred ccc----------cccccccccccccccccccccccccchhhhcccccccc-chhhhhhhhhhhccccceEEeecccccc
Confidence 321 2468999999998655 566678999999999875 6899999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
|.+.|+++|.++|+++ +++++||++++.+..|+ ++...++|++.+++|| +++|.|+|+++++++.
T Consensus 153 G~~~pi~~I~~~~~~~------~~~~~vD~~~~~g~~~i-------d~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~- 217 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEY------GALLVVDAAQSAGCVPI-------DLDELGADFLVFSSHK-LGGPPGLGFLYVRPEA- 217 (371)
T ss_dssp TBBSSHHHHHHHHHHT------TSEEEEE-TTTTTTSS---------TTTTTESEEEEESTS-TTSSSTEEEEEEEHHH-
T ss_pred cEEeeeceehhhhhcc------CCceeEechhccccccc-------cccccccceeeecccc-cCCCCchhhheehhhh-
Confidence 9999999999999999 99999999998876554 3444479999999999 8899999999998731
Q ss_pred CCcccccccCcc------------CCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 296 LPDELVFHINYL------------GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 296 l~~~~~~~~~yl------------~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
+....+....+. ......|. .|+.+...++++..+++.+...|.+++.++..++++++.+.|+++++
T Consensus 218 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~ 296 (371)
T PF00266_consen 218 IERLRPAKPGGGYLDFPSLQEYGLADDARRFE-GGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPG 296 (371)
T ss_dssp HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSS-SSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhccccccccccccccccchhccccccccccc-ccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCc
Confidence 111100011100 00111111 35777777888889999998889999999999999999999999998
Q ss_pred eEEeeCC---CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC-----CCCeeEEEEeecCCCCHHHHHHH
Q 010897 364 FEILSKD---VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN-----AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 364 ~~~~~~~---~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~-----~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
+.++.+. ...++++|.+++ .+...+.+.|.++|+.+........ ..-.+++|||++..+|.+|+|+|
T Consensus 297 ~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 297 IEVLGPDDEPRRPSIVSFNLPG---SDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEESSSSCGGBGTTEEEEEETT---SSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eeEeeecccccccceEEEeecC---CCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 8887631 267899999943 6788999999999998866321110 00126799999999999999875
No 37
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=8.1e-28 Score=250.60 Aligned_cols=368 Identities=17% Similarity=0.150 Sum_probs=248.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhccCC--CCC-cccccccCCChH-HHHHHHH--HHhcc-CCCCCcCCcchHHHHHHHHH
Q 010897 30 FKMPDNSMPKEAAYQVINDELMLDGN--PRL-NLASFVTTWMEP-ECDKLVM--ASINK-NYVDMDEYPVTTELQNRCVN 102 (498)
Q Consensus 30 ~~~p~~~~~~~~~~~~~~~~~~~~~~--p~~-~~~~~~~~~~~~-~~~~~l~--~~~~~-n~~~~~~~~~~~~le~~~~~ 102 (498)
.++|+.+ +.+++++.+......+.. .++ +++.+.+....| .+.+... +.+.. ++..++.+++..+...+..+
T Consensus 41 ~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~ 119 (447)
T PRK00451 41 LDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQT 119 (447)
T ss_pred CCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHH
Confidence 3788865 999999998876643211 122 234444443334 3333332 12222 22233446677777778889
Q ss_pred HHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHH----cCCee
Q 010897 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----FEVEL 178 (498)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~----~g~~~ 178 (498)
++++++|++.. .+.+|+|+++++..++.+.... .+++|+++++.|.++.++++. .|+++
T Consensus 120 ~la~l~g~~~~-----~v~~~~g~t~~~~~~~~a~~~~------------~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~ 182 (447)
T PRK00451 120 MICELTGMDVA-----NASMYDGATALAEAALMAVRIT------------KRKKVLVSGAVHPEYREVLKTYLKGQGIEV 182 (447)
T ss_pred HHHHHhCCCcc-----eEEecCcHHHHHHHHHHHHHhc------------CCCEEEEeCccCHHHHHHHHHHHHhCCcEE
Confidence 99999999863 3889999998876666655321 146899999999988887665 69999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE--ecCcccccccccC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV--DAASGGFIAPFLY 256 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v--D~A~~g~~~~~~~ 256 (498)
+.++++++ .+|+++|+++++++|++|+++++ |+||.++|+++|.++|+++ |+|++| |....+.. .
T Consensus 183 ~~v~~~~~--~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~------~~~~iv~~d~~~~g~~----~ 249 (447)
T PRK00451 183 VEVPYEDG--VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG------GALFIVGVDPVSLGLL----K 249 (447)
T ss_pred EEecCCCC--CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC------CCEEEEEcChHHhccC----C
Confidence 99998764 79999999999999999999998 8899999999999999999 999998 65543321 1
Q ss_pred CCCccccCCCCeeEEEEcCCcc----CCCCCCeEEEEEeCCCCCCccccc-----------ccCcc----------CCCC
Q 010897 257 PDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVF-----------HINYL----------GSDQ 311 (498)
Q Consensus 257 ~~~~~~~~~~~~dsi~~s~hK~----l~~p~g~g~~~~~~~~~l~~~~~~-----------~~~yl----------~~~~ 311 (498)
+ ....++|++..++||| .++++|+|+++++.+ .+.. +.. ...|. ....
T Consensus 250 ~-----~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (447)
T PRK00451 250 P-----PGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK-LVRQ-MPGRLVGETVDADGKRGFVLTLQAREQHIRREK 322 (447)
T ss_pred C-----cccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH-HHhh-CCCCEeeeecccCCCeeeEeecccccccccccc
Confidence 1 1223689999999997 345568999887653 2211 100 00011 0000
Q ss_pred CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHH
Q 010897 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEI 391 (498)
Q Consensus 312 ~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l 391 (498)
....+ ++..+...++.+.+++.++.+|++++.++..++++++.+.|+++++++++..+ ...+++++++ .+..++
T Consensus 323 ~~~~~-~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~v~~~----~~~~~~ 396 (447)
T PRK00451 323 ATSNI-CTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGP-FFNEFVVRLP----KPAEEV 396 (447)
T ss_pred ccccc-cccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCC-eEEEEEEecC----CCHHHH
Confidence 01010 22222333555566777899999999999999999999999999889887322 3344555552 356799
Q ss_pred HHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 392 SEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 392 ~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+++|.++|++......+.......++|+++++..|++++++|+++|++++
T Consensus 397 ~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 397 NEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99999998763211111100113579999998899999999999998764
No 38
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=3.1e-28 Score=246.44 Aligned_cols=331 Identities=19% Similarity=0.165 Sum_probs=242.9
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.++.+.+++.+.+.. ..++...++.+++++.+++++|.+.+ ...+++.++++++.+++.++..+
T Consensus 9 ~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~----~~~~~~~~~t~al~~~~~~~~~~------ 73 (356)
T cd06451 9 NVPPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQTENG----LTFLLSGSGTGAMEAALSNLLEP------ 73 (356)
T ss_pred CCCHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhcCCCC----CEEEEecCcHHHHHHHHHHhCCC------
Confidence 4456677776533221 24566777788999999999999542 23778888899998888776321
Q ss_pred hcCCCCCCcEEEEcCCchhH--HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~--~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~ 223 (498)
+++|+++.+.|++ +...++..|++++.+|++++ +.+|++++++.+++ +|++|++++++|++|.+.|+++
T Consensus 74 -------g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 74 -------GDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG-EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred -------CCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC-CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHH
Confidence 4689998888876 56788899999999999864 78999999999987 8999999999999999999999
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc-
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~- 302 (498)
|.++|+++ |+++++|++++.+..++ ++...++|++..++|||+++|.|+|+++.+++ .+ ..+..
T Consensus 146 i~~~a~~~------~~~li~D~~~~~g~~~~-------~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~-~~~~~~ 210 (356)
T cd06451 146 IGALAKKH------DALLIVDAVSSLGGEPF-------RMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-AL-ERIKKK 210 (356)
T ss_pred HHHHHHhc------CCEEEEeeehhccCccc-------cccccCccEEEecCchhccCCCCcceeEECHH-HH-HHHHhc
Confidence 99999999 99999999986443222 11112578889999999999999999998653 22 11110
Q ss_pred --ccCccCC-------CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-C
Q 010897 303 --HINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-G 372 (498)
Q Consensus 303 --~~~yl~~-------~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~ 372 (498)
...+... ....+...++.+...+.++.+++..+...++.++.++..++++++.+.|++++ ++++.++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 289 (356)
T cd06451 211 TKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELR 289 (356)
T ss_pred CCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccC
Confidence 0111100 00011112344444566777888888888899999999999999999999985 88875432 2
Q ss_pred ccEE-EEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 373 VPLV-AFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 373 ~~~v-~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+.+ .+.++ .+.+..++++.|.++ |+.+.....+ ...+++|++++..++.++++++++.|++++
T Consensus 290 ~~~~~~~~~~--~~~~~~~~~~~L~~~~gI~~~~g~~~---~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 290 SPTVTAVLVP--EGVDGDEVVRRLMKRYNIEIAGGLGP---TAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CCceEEEECC--CCCCHHHHHHHHHHhCCEEEeccccc---ccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 4444 34553 246788999999998 9887543222 123589999998899999999999998875
No 39
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=4.8e-28 Score=245.64 Aligned_cols=345 Identities=16% Similarity=0.139 Sum_probs=245.6
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
++|..+.|.. .++.+.+++.+++......|....+..+|++.+.+++.+.+|++.+.+ ..+++|+|+++|+++++.+
T Consensus 31 i~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~--~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 31 IDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPE--EEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEEeCCHHHHHHHHHHH
Confidence 3444444433 355688888888877532344778999999999999999999665432 2399999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC--CccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
+.++ +++|++++|.|.+|....+++|++++.|+++. ++|.+|++.|+++++++|++|++++|+||
T Consensus 109 ~~~p-------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NP 175 (393)
T COG0436 109 LLNP-------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNP 175 (393)
T ss_pred hcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCC
Confidence 8774 57899999999999999999999999999853 36999999999999999999999999999
Q ss_pred cccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC----CCCeeEEEEcCCccCCCCCCeEE
Q 010897 215 TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 215 tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~----~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
||.+ +.+++|+++|++| |++|+.|++|.+++. .......... .+.+.+++.-++-|.++++++||
T Consensus 176 TGav~~~~~l~~i~~~a~~~------~i~ii~DEiY~~l~y--d~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~ 247 (393)
T COG0436 176 TGAVYSKEELKAIVELAREH------DIIIISDEIYEELVY--DGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGW 247 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHc------CeEEEEehhhhhccc--CCCCcCCHhhcCCCcceEEEEecccccccccccceeE
Confidence 9999 4578899999999 999999999998762 2111111111 23456666666668889999999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
++..+++.. +....-..++. .....+.|.+++..|.. +..+...+...++++.+.+.|.++++
T Consensus 248 ~v~~~~~l~-~~~~~~~~~~~------------~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g 314 (393)
T COG0436 248 VVGPPEELI-AALRKLKSYLT------------SCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGG 314 (393)
T ss_pred eecChHHHH-HHHHHHHHhcc------------cCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 997643222 11110011111 12345668888877753 24556667888899999999999998
Q ss_pred eEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+.+..++.+...+..+++. ..|..+++.+|.++ |+.+.....-....+.+++|+++.. +.+.+++.++.|.+.++
T Consensus 315 ~~~~~~p~Ga~Y~~~~i~~--~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 315 LSVVKPPEGAFYLFPKIPE--LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT--SEETLEEALRRLARFLA 390 (393)
T ss_pred eeeccCCCeeEEEEeecCC--CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec--CHHHHHHHHHHHHHHHH
Confidence 9888744344444446643 26888999988776 5655322211111356789999864 33555555555555543
No 40
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.96 E-value=1.6e-27 Score=256.07 Aligned_cols=428 Identities=12% Similarity=0.081 Sum_probs=291.2
Q ss_pred CCCCHHHHHHHHHHhhhccCC---CCCcccccccC------CChHHHHHHHHHHhccCCCCC-cCCcchHHHHHHHHHHH
Q 010897 35 NSMPKEAAYQVINDELMLDGN---PRLNLASFVTT------WMEPECDKLVMASINKNYVDM-DEYPVTTELQNRCVNMI 104 (498)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~------~~~~~~~~~l~~~~~~n~~~~-~~~~~~~~le~~~~~~l 104 (498)
.+.+.-++++.++++-..+-. ..+.+++ +|. .+.|. ...+++...++.+ +..++..++-.++.+|+
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGs-CTmK~n~~~~~~p~---s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l 552 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGS-CTMKLNATSEMIPI---TWPEFAQLHPFAPREQAEGYRAMIDELEAWL 552 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcc-cccCcCcHHhhhcc---cchhhhcCCCCCchhhhcCHHHHHHHHHHHH
Confidence 457899999999887554311 1122232 111 11121 1233444456666 56778889989999999
Q ss_pred HHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec
Q 010897 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (498)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~ 184 (498)
++++|++. ...--.+|+.+++.++.+++..+ .. .|.+ ++.+|+++...|.+....+...|++++.|+++
T Consensus 553 ~eLtGmd~------~Sl~p~sGA~gE~A~Lmair~yh-~~---~Ge~-~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D 621 (954)
T PRK12566 553 CAITGFDA------ICMQPNSGAQGEYAGLLAIRRYH-RS---RGQS-QRDICLIPSSAHGTNPASAQMAGMRVVIVECD 621 (954)
T ss_pred HHHHCCCe------EeecCCchHHHHHHHHHHHHHHH-Hh---cCCC-CCCEEEecccccccCHHHHHHCCCEEEEeccC
Confidence 99999985 23444477888877777775422 11 1221 25689999999976666688889999999998
Q ss_pred CCccccCHHHHHHHhh---hCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc
Q 010897 185 EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~---~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~ 261 (498)
++ +.+|+++|+++++ +++.+|.+++|++..+..+|+++|+++++++ |+++++|+|+.-...++..|
T Consensus 622 ~~-G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~------Galv~vDgA~~~a~~~l~~P---- 690 (954)
T PRK12566 622 PD-GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH------GGQVYMDGANLNAQVGLARP---- 690 (954)
T ss_pred CC-CCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc------CCEEEEEeeChhhccCCCCh----
Confidence 64 7999999999997 6788899999998876667899999999999 99999999996433222211
Q ss_pred ccCCCCeeEEEEcCCccCCCCCCeEEEEEeC---CCCCCcccccccC--ccCC--CCCCccccCCCchHHHHHHHHHHHH
Q 010897 262 DFRLPLVKSINVSGHKYGLVYAGVGWVVWRT---KDDLPDELVFHIN--YLGS--DQPTFTLNFSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 262 ~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~---~~~l~~~~~~~~~--yl~~--~~~~~~l~~sr~~~~~~a~~~~l~~ 334 (498)
+..++|++..++|||++.|.|.|..+++. ++.+...++..+. .-+. ......-.++..+..++..|..++.
T Consensus 691 --g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~ 768 (954)
T PRK12566 691 --ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAM 768 (954)
T ss_pred --hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHH
Confidence 22369999999999999888887766554 2212111111110 0010 0111111233334456778888899
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC---CCccEEEE---EecCCCCCCHHHHHHHHHhcCcEeeeecCC
Q 010897 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAF---SLKDSSAHTVFEISEGLRKFGWIVPAYTMP 408 (498)
Q Consensus 335 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f---~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~ 408 (498)
+|.+ .++.......+++|+.+.|++. +.+...+ ..++-..+ .++...+.+..+++++|.+.|+..+....|
T Consensus 769 lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fP 845 (954)
T PRK12566 769 MGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFP 845 (954)
T ss_pred HCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeec
Confidence 9998 8888888899999999999873 4443332 11222223 333223467789999999999887653222
Q ss_pred CCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCcc-------cccccccccccccccccC-CCccccccccccc
Q 010897 409 ANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPS-------RVSTKTAHVIPMVNETQG-DKPLKKSVRETQE 480 (498)
Q Consensus 409 ~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 480 (498)
....+||+.++..+.+|+|+|+++|+.+.+++++..+ .+.+.-||. +.+-+++| ..+|++.+..+..
T Consensus 846 ----v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~g~~~~~~n~l~~apht-~~~~~~~w~~~y~r~~a~~p~~ 920 (954)
T PRK12566 846 ----VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQEGNWPAEDNPLKRAPHT-LADVTGVWQRPYSIEQAVTPSA 920 (954)
T ss_pred ----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCcccCCCCc-hHHhhccCCCCcChhhcccCCC
Confidence 3567999999999999999999999999999876422 233334887 44445567 5678877765542
Q ss_pred --chhhhhhhhcc-----cccccCC
Q 010897 481 --EVTRHWKRFVK-----GRRAGAC 498 (498)
Q Consensus 481 --~~~~~~~~~~~-----~~~~~~~ 498 (498)
...+||+.+.+ |++|.||
T Consensus 921 ~~~~~k~wp~v~r~d~~~gdrnl~c 945 (954)
T PRK12566 921 HARAHKYWPAVNRVDNVYGDRNLFC 945 (954)
T ss_pred cccCCCcCCCcCCcCcccccccccc
Confidence 33689999886 9999999
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=4.2e-27 Score=240.40 Aligned_cols=330 Identities=15% Similarity=0.075 Sum_probs=232.2
Q ss_pred CChHHHHHHHHHHhccCCCCC-----cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
++++.+.+++.+..... ..+ ..........+++++.+|+++|.+. ..+++|+++++..++.++..+
T Consensus 31 p~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~-------~~~~~g~t~a~~~al~~l~~~- 101 (387)
T PRK09331 31 ILTPEARKALIEYGDGY-SVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE-------ARVTHGAREGKFAVMHSLCKK- 101 (387)
T ss_pred CCCHHHHHHHHHHHhcc-CCCcccccccccccChHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 55677888888776331 111 1111223345677788999999864 778999999999888777432
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe--cCCccccCHHHHHHHhhh-------CCeEEEEeecc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE-------NTICVAAILGS 212 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~--~~~~~~~d~~~L~~~i~~-------~t~~v~~~~~~ 212 (498)
+++|+++..+|++...+++..|++++.+++ ++ ++.+|++++++++++ ++++|++++++
T Consensus 102 ------------gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~ 168 (387)
T PRK09331 102 ------------GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVD 168 (387)
T ss_pred ------------CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCC
Confidence 468999999999998889999999999998 44 478999999999864 58999999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeC
Q 010897 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (498)
Q Consensus 213 t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~ 292 (498)
+++|.+.|+++|.++|+++ |+++|||+||+.+..|+. ....++|.++.++||++++|.|+|++++++
T Consensus 169 ~~tG~~~~l~~I~~la~~~------g~~livD~a~~~g~~~~~-------~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~ 235 (387)
T PRK09331 169 GNYGNLADAKKVAKVAHEY------GIPFLLNGAYTVGRMPVD-------GKKLGADFIVGSGHKSMAASAPSGVLATTE 235 (387)
T ss_pred CCCcccccHHHHHHHHHHc------CCEEEEECCcccCCcCCC-------HHHcCCCEEEeeCcccccCCCCEEEEEECH
Confidence 9999999999999999999 999999999987654432 112258999999999999999999988764
Q ss_pred CCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC-CC
Q 010897 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK-DV 371 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~ 371 (498)
+ .+.........|.......+ .++.....++++++++..+... .++.++..++++++++.|+++++++++.+ +.
T Consensus 236 ~-~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~ 310 (387)
T PRK09331 236 E-YADKVFRTSRKFGVKEVELL--GCTLRGAPLVTLMASFPHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKPR 310 (387)
T ss_pred H-HHhhcccccCCCcccceeee--ceecCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcC
Confidence 2 22111111111211100001 1122223445555565443222 24566778899999999999977998853 22
Q ss_pred CccEEEEEecC------CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 372 GVPLVAFSLKD------SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 372 ~~~~v~f~~~~------~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..+++.+..+. ....+...+.+.|.++|+... .+ ....++|++... .+.++++++++.|++++++
T Consensus 311 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~---~~~~i~ri~~~g-~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 311 NHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI---KP---GATKEFKLSTYG-LTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred cCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE---cc---CCceEEEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 46777776541 112234679999999998621 11 234567877744 6899999999999988765
No 42
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=5.9e-27 Score=240.94 Aligned_cols=341 Identities=16% Similarity=0.120 Sum_probs=238.2
Q ss_pred cCCChHHHHHHHHHHhc--cCCCCCcCC-c----chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASIN--KNYVDMDEY-P----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~--~n~~~~~~~-~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~ 137 (498)
++++++.+.+++.+.+. ..+..+... . .....-+++++++++++|.+.+ .+++++|+|+++.+++.++
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-----~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 12 TTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-----EIVFTSGATESDNLAIKGA 86 (404)
T ss_pred CCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-----eEEEeCCHHHHHHHHHHHH
Confidence 34566778888877765 333222211 0 1123445678899999998753 3889999999999988876
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHH---cCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~---~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
...+. ..+++|++++.+|.++...++. .|++++.++++++ +.+|+++|+++|+++|++|++++++|+
T Consensus 87 ~~~~~---------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~ 156 (404)
T PRK14012 87 AHFYQ---------KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN-GIIDLEKLEAAMRDDTILVSIMHVNNE 156 (404)
T ss_pred HHhhc---------CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECcCCC
Confidence 53211 0146899999999887665544 5999999998864 789999999999999999999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
||.+.|+++|.++|+++ ++++|+|+|++.+..++ +....++|++++++||+ ++|.|+|++++++..
T Consensus 157 tG~~~~~~~I~~la~~~------g~~vivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~ 222 (404)
T PRK14012 157 IGVIQDIAAIGEICRER------GIIFHVDAAQSVGKVPI-------DLSKLKVDLMSFSAHKI-YGPKGIGALYVRRKP 222 (404)
T ss_pred ccchhhHHHHHHHHHHc------CCEEEEEcchhcCCccc-------CcccCCCCEEEEehhhc-cCCCceEEEEEecCC
Confidence 99999999999999999 99999999998765432 22223589999999995 567899999988753
Q ss_pred CCCcccccccCccCCCC-CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-C
Q 010897 295 DLPDELVFHINYLGSDQ-PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-G 372 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~-~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~ 372 (498)
.. . ..+.+.++.. ..+. .++.+....+++.+++..+ ..+..+..++..++++++.+.|++++++.+..+.. .
T Consensus 223 ~~-~---~~~~~~g~~~~~~~~-~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~ 296 (404)
T PRK14012 223 RV-R---LEAQMHGGGHERGMR-SGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQR 296 (404)
T ss_pred CC-C---CCceecCCCccCCcc-CCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcccc
Confidence 22 1 1122222221 1111 2444445556666666554 33566778888999999999999988887764321 1
Q ss_pred ---ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeee--cCCCC--------------CCCeeEEEEeecCCCCHHHHHHH
Q 010897 373 ---VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAY--TMPAN--------------AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 373 ---~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~--~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
...+.|.+. +..++...|. ++.+... +.+.. ......+|++++..+|.+|+|++
T Consensus 297 ~~~~~~~~~~~~-----~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~ 369 (404)
T PRK14012 297 VPGNLNVSFNYV-----EGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYA 369 (404)
T ss_pred CCCEEEEEEeCc-----CHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 224555542 2346777775 4333321 22210 11246899999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 010897 434 ISHIEEVLKEIESL 447 (498)
Q Consensus 434 ~~~l~~~l~~l~~~ 447 (498)
++.|+++++.++..
T Consensus 370 ~~~l~~~~~~~~~~ 383 (404)
T PRK14012 370 IELVRKSIGKLREL 383 (404)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887553
No 43
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=2.4e-27 Score=240.57 Aligned_cols=317 Identities=16% Similarity=0.135 Sum_probs=230.5
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH-HHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEK 169 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~-~~~ 169 (498)
+....+-+++++.+++++|.+++. ..+++|.|+|+++..++.++..+ ++..|+++...|.. +..
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~---~~i~~t~~~t~al~~~~~~l~~~------------~~~vlv~~~~~~~~~~~~ 95 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGY---TSVLLQGSGTFAVEAVIGSAVPK------------DGKLLVVINGAYGARIVQ 95 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCCHHHHHHHHHhcCCC------------CCeEEEEeCChhhHHHHH
Confidence 345556678999999999997521 23889999999998888776432 12345666666665 467
Q ss_pred HHHHcCCeeEEEEecCCccccCHHHHHHHhhhC--CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCc
Q 010897 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (498)
Q Consensus 170 ~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~--t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~ 247 (498)
.++..|++++.++++++ +.+|++++++++.++ ++.|++++++|+||.+.|+++|.++|+++ +++++||+++
T Consensus 96 ~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~------g~~livD~~~ 168 (363)
T TIGR02326 96 IAEYLGIPHHVVDTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRH------GKVTIVDAMS 168 (363)
T ss_pred HHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHc------CCEEEEEccc
Confidence 78899999999998764 679999999999854 46788899999999999999999999999 9999999998
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccc-cccCccC-------CCCCCccccCC
Q 010897 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV-FHINYLG-------SDQPTFTLNFS 319 (498)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~-~~~~yl~-------~~~~~~~l~~s 319 (498)
+.+..|+ ++...++|++..++|||+++|+|+|+++++++. +..... ....++. .....-...++
T Consensus 169 ~~g~~~~-------~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft 240 (363)
T TIGR02326 169 SFGGIPI-------DIAELHIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMEDNHGKWRFT 240 (363)
T ss_pred cccCccc-------chhhcCccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhccCCCCCCC
Confidence 7654333 222235899999999999999999999987642 111100 0000100 00000011234
Q ss_pred CchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CCccE-EEEEecCCCCCCHHHHHHHHH
Q 010897 320 KGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPL-VAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 320 r~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~-v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.+...++++..+++.+..+ +++++.+++.++++++.+.|++++ ++++.++ ...++ ++|.+++....+..++.+.|.
T Consensus 241 ~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 319 (363)
T TIGR02326 241 SPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK 319 (363)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH
Confidence 5566778888888887666 488889999999999999999985 7776543 13444 567775422356778999999
Q ss_pred hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 397 ~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
++|+.+..... ....++|++++...+.++++++++.|++++.
T Consensus 320 ~~gi~v~~g~~----~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 320 EQGFVIYPGKV----SQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HCCEEEECCcC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 99998754322 1236799998777899999999999988763
No 44
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=1.1e-26 Score=234.73 Aligned_cols=304 Identities=16% Similarity=0.126 Sum_probs=223.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcC-----CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
.+++++.+.+++.+.+......+.. ......+.+++++++++++|.+.+ .+++|+|+++++.+++.++..
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-----EVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 3356677888888777443222222 123345667899999999999753 389999999999888877643
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHHH---HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~---~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
. +...+++.|+++...|.++... ++..|++++.++++++ +.+|+++|+++++++|++|++++++|+||
T Consensus 82 ~--------~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG 152 (353)
T TIGR03235 82 A--------GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-GRIDVDELADAIRPDTLLVSIMHVNNETG 152 (353)
T ss_pred h--------cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhCCCCCEEEEEEcccCCce
Confidence 2 0011236899999999876554 3446999999998864 78999999999998899999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
.+.|+++|.++|+++ ++++|||++++.+..++ ++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~~~~I~~l~~~~------~~~~ivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~ 218 (353)
T TIGR03235 153 SIQPIREIAEVLEAH------EAFFHVDAAQVVGKITV-------DLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKP 218 (353)
T ss_pred eccCHHHHHHHHHHc------CCEEEEEchhhcCCccc-------cccccCCCEEEeehhhc-CCCCceEEEEEccCccc
Confidence 999999999999999 99999999998766443 23334699999999998 57999999999875321
Q ss_pred CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC--Ccc
Q 010897 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVP 374 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~ 374 (498)
.. ...+.+.+.......-.++.+...++++.++++.+. ++.+++.++..++++++.+.|++ .+++++.++. ...
T Consensus 219 ~~--~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~ 294 (353)
T TIGR03235 219 KA--PLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPH 294 (353)
T ss_pred cc--ccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCC
Confidence 11 122222322211111235666667777888887654 57788899999999999999988 5699886532 345
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeee
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPA 404 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~ 404 (498)
+++|.++ +.+..++.+.|.+ |+.+..
T Consensus 295 i~~~~~~---~~~~~~v~~~L~~-~i~v~~ 320 (353)
T TIGR03235 295 ILNFSID---GVNSEALIVNLRA-DAAVST 320 (353)
T ss_pred EEEEEeC---CcCHHHHHHHHhC-CeEEEc
Confidence 7888774 3677899999965 777653
No 45
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=3.7e-27 Score=241.73 Aligned_cols=334 Identities=14% Similarity=0.057 Sum_probs=247.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
..++.+.+++.... .. ..++...++.+++++++++++|.+.+ ...++++++++++..++....++
T Consensus 19 ~~~~~V~~a~~~~~----~~-~~~~~~~~~~~~~~~~l~~~~g~~~~----~~vi~~~~gt~a~~~a~~~~~~~------ 83 (401)
T PLN02409 19 NIPERVLRAMNRPN----ED-HRSPAFPALTKELLEDVKYIFKTKSG----TPFIFPTTGTGAWESALTNTLSP------ 83 (401)
T ss_pred CCCHHHHHHhcCCC----CC-CCCHHHHHHHHHHHHHHHHHhCCCCC----CEEEEeCCcHHHHHHHHHhcCCC------
Confidence 34566666654322 11 13567778888999999999999752 24788888899887776554322
Q ss_pred hcCCCCCCcEEEEcCCchhHH--HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh----CCeEEEEeeccCCcccccC
Q 010897 147 EQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~--~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~----~t~~v~~~~~~t~tG~~~~ 220 (498)
+++|+++++.|++. ...++..|++++.++.+++ ..+|++++++++++ ++++|++++++|+||.+.|
T Consensus 84 -------Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 84 -------GDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -------CCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 46899999888654 5778889999999998764 45899999999986 6899999999999999999
Q ss_pred HHHHHHH--HHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 221 VKLLHDL--LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 221 l~~I~~l--a~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
+++|.++ |+++ |++++||++++.+..|+ ++...++|++.+++|||+++|.|+|+++++++ .+..
T Consensus 156 ~~~i~~l~~~~~~------g~~~vvD~v~s~g~~~i-------d~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~ 221 (401)
T PLN02409 156 LAGVRKLLDCAQH------PALLLVDGVSSIGALDF-------RMDEWGVDVALTGSQKALSLPTGLGIVCASPK-ALEA 221 (401)
T ss_pred HHHHHHHHhhhcc------CcEEEEEcccccCCccc-------cccccCccEEEEcCccccCcCCCcceeEECHH-HHHH
Confidence 9999999 9999 99999999998654333 22223689999999999999999999997654 2211
Q ss_pred cccc--ccCccC------C-CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 299 ELVF--HINYLG------S-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 299 ~~~~--~~~yl~------~-~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
.... ...|.+ . ....+ ..++.+...++++..+++.+...|++++.++..++++++.+.|++++ ++++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~-~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~~~ 299 (401)
T PLN02409 222 SKTAKSPRVFFDWADYLKFYKLGTY-WPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWG-LKLCTK 299 (401)
T ss_pred HhcCCCCCeecCHHHHHHHHhcCCC-CCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccC
Confidence 1000 111111 0 00011 12455556678888899888888999999999999999999999885 888864
Q ss_pred CC--Cc-cEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 370 DV--GV-PLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 370 ~~--~~-~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.. .. .+++|+++ ++++..++.+.|. ++|+.+.....+ ....++||+.+...+.+++.+++.+|+.++..+
T Consensus 300 ~~~~~s~~v~~~~~p--~~~~~~~l~~~l~~~~~i~i~~G~~~---~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 300 KPEWRSDTVTAVVVP--EGIDSAEIVKNAWKKYNLSLGLGLNK---VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred ChhhcccceEEEeCC--CCCCHHHHHHHHHHhCCEEEEcCCCc---ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 21 24 45667774 3577788988875 568776543221 235679999999999999999999999988764
No 46
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.96 E-value=1.2e-26 Score=238.70 Aligned_cols=330 Identities=13% Similarity=0.035 Sum_probs=231.8
Q ss_pred CChHHHHHHHHHHhcc---CCC-CCcC-CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINK---NYV-DMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~---n~~-~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
++++.+.+++.++++. +.. .+.. ......+.++..+ + +++|.+++ .+++|+|+|+++.+++.++..+
T Consensus 38 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-----~v~~~~~~t~~l~~~~~~~~~~- 109 (406)
T TIGR01814 38 LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-----EVVVMNTLTINLHLLLASFYKP- 109 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-----cEEEeCCchHHHHHHHHHhcCC-
Confidence 4456677777665543 111 1111 1222334444433 4 78998753 3899999999998887775221
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHcCCee----EEEEecCCccccCHHHHHHHhh---hCCeEEEEee
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVEL----KEVKLEEGYYVMNPVKAVELVD---ENTICVAAIL 210 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~g~~~----~~v~~~~~~~~~d~~~L~~~i~---~~t~~v~~~~ 210 (498)
| .++.+|+++...|.+ +...++..|+++ +.++.++ ++.+|++++++.+. ++|++|++++
T Consensus 110 -------~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~~~ 179 (406)
T TIGR01814 110 -------T--PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE-EETLRLEDILDTIEKNGDDIAVILLSG 179 (406)
T ss_pred -------c--CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC-CCccCHHHHHHHHHhcCCCeEEEEEec
Confidence 0 012478899899987 344566779887 4565554 36789999988874 6799999999
Q ss_pred ccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEE
Q 010897 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (498)
Q Consensus 211 ~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~ 290 (498)
+++.||.+.|+++|.++|+++ |++++||++++.+..|+ ++...++|++++++|||+++|+| |.+++
T Consensus 180 v~~~tG~~~~~~~i~~~~~~~------g~~~~vD~aq~~G~~~i-------d~~~~gvD~~~~s~hK~l~g~pG-~~l~v 245 (406)
T TIGR01814 180 VQYYTGQLFDMAAITRAAHAK------GALVGFDLAHAVGNVPL-------DLHDWGVDFACWCTYKYLNAGPG-AGAFV 245 (406)
T ss_pred cccccceecCHHHHHHHHHHc------CCEEEEEcccccCCccc-------ccccCCCCEEEEcCccccCCCCC-eEEEE
Confidence 999999999999999999999 99999999999876554 33334699999999999987888 55655
Q ss_pred eCCCCCCcccccccCccCCC--------------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010897 291 RTKDDLPDELVFHINYLGSD--------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 291 ~~~~~l~~~~~~~~~yl~~~--------------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~ 356 (498)
+.+.. ....+....|.+.. ...+. .|+.+...++++.++++.+...|..++.++..++++++.+
T Consensus 246 ~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~ 323 (406)
T TIGR01814 246 HEKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFR-ISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEE 323 (406)
T ss_pred ehhhh-hhcCCCCCcccCCCCccccccccccCCCcccee-eCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 54321 11111111111110 00111 2566666778888899888788889999999999999999
Q ss_pred HHhcC----CCeEEeeCCC---CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEee-cCCCCHH
Q 010897 357 GLEKT----GRFEILSKDV---GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVV-REDFSRS 428 (498)
Q Consensus 357 ~L~~~----~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v-~~~~t~~ 428 (498)
.|+++ ++++++.+.. ..++++|.++ .+..++.++|.++|+.+.. .....+|+|+ +..+|.+
T Consensus 324 ~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~----~~~~~~~~~L~~~gi~v~~-------~~~~~iRiS~~~~~nt~~ 392 (406)
T TIGR01814 324 LIKARCGGPPVLTIITPRDHAQRGCQLSLTHP----VPGKAVFQALIKRGVIGDK-------REPSVIRVAPVPLYNTFV 392 (406)
T ss_pred HHHhhcCCCCceEEeCCCChhhcCCeEEEEec----CCHHHHHHHHHHCCEEEec-------cCCCeEEEechhccCCHH
Confidence 99875 3588886532 3568899874 2567899999999987531 1234799998 5788999
Q ss_pred HHHHHHHHHHHHH
Q 010897 429 LVERLISHIEEVL 441 (498)
Q Consensus 429 ~~~~l~~~l~~~l 441 (498)
|++++++.|++++
T Consensus 393 did~l~~~l~~~~ 405 (406)
T TIGR01814 393 DVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 47
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=3.9e-26 Score=231.43 Aligned_cols=329 Identities=15% Similarity=0.093 Sum_probs=224.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcC-Cc----chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDE-YP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~-~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
+..+.+.+++.+.... +..+.. .. ......+++++.+++++|.+. +++|+|+++++.+++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-------i~~~~g~t~al~~~l~~~~~~- 82 (361)
T cd06452 12 RLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDE-------ARVTPGAREGKFAVMHSLCEK- 82 (361)
T ss_pred CCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCCce-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 4567777777766522 211111 00 011233466677999999843 889999999998888776432
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC-ccccCHHHHHHHhhh-------CCeEEEEeeccC
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-------NTICVAAILGST 213 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~L~~~i~~-------~t~~v~~~~~~t 213 (498)
+++|+++.++|++...+++..|++++.++++++ +|.+|++++++++++ ++++|++++++|
T Consensus 83 ------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 ------------GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred ------------CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 468999999999988889999999999999754 368999999998863 688999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCC
Q 010897 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (498)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~ 293 (498)
++|.+.|+++|.++|+++ ++++|+|+||+.+..++.. ...++|++..++||++++|.++|+++.+.+
T Consensus 151 ~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~~~-------~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~ 217 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEY------GVPLLLNGAYTVGRMPVSG-------KELGADFIVGSGHKSMAASAPIGVLATTEE 217 (361)
T ss_pred CCeeeccHHHHHHHHHHc------CCeEEEECCcccCCcCCCH-------HHcCCCEEEecCCccccCCCCeEEEEECHH
Confidence 999999999999999999 9999999999865433311 112478999999999988889999887642
Q ss_pred CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CC
Q 010897 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VG 372 (498)
Q Consensus 294 ~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~ 372 (498)
.+ +.+.....++......+ +.++.....+..+++++..+. .+.+...+..++++++.+.|+++++++++.+. ..
T Consensus 218 -~~-~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~ 292 (361)
T cd06452 218 -WA-DIVFRTSQMFKIKEVEL-LGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKN 292 (361)
T ss_pred -HH-HHHhccccccccceeee-eccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCC
Confidence 22 11111111111111000 112222233444555554431 22345566667789999999999779987432 25
Q ss_pred ccEEEEEecCC------CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDS------SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 373 ~~~v~f~~~~~------~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.|++.|+.+.- ...+..++.++|.++|+.+. .+ ....++|+++.. .++++++.++++|+++.
T Consensus 293 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~---~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 293 HDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KP---GLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cC---CCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 67888876410 01223469999999998741 11 223479999843 58999999999988654
No 48
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=4.4e-26 Score=234.24 Aligned_cols=340 Identities=17% Similarity=0.108 Sum_probs=229.3
Q ss_pred CcccccccCCChHH-HHHHHHHHhccCCCCCcC-----CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHH
Q 010897 58 LNLASFVTTWMEPE-CDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (498)
Q Consensus 58 ~~~~~~~~~~~~~~-~~~~l~~~~~~n~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~ 131 (498)
.++..+.+.+++|. +.+++.++ .....|.. +.+..++.+++++++++++|.+.+ ...++++++.+..
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-----~v~~~~~g~~~~~ 95 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA-----NASLQDEATAAAE 95 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc-----ceeccCchHHHHH
Confidence 34455556665555 44444444 21111222 567788999999999999998742 1556665554444
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcC----CeeEEEEecCCccccCHHHHHHHhhhCCeEEE
Q 010897 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE----VELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (498)
Q Consensus 132 la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g----~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~ 207 (498)
.++.++... .+ ++++|+++++.|.++...+..+| ++++.++++++ +.+|+++|+++++++|++|+
T Consensus 96 ~~~~~~~~~-------~~---~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~t~~vi 164 (398)
T cd00613 96 AAGLAAIRA-------YH---KRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG-GTVDLEALKEEVSEEVAALM 164 (398)
T ss_pred HHHHHHHhc-------cc---CCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-CCcCHHHHHHhcCCCeEEEE
Confidence 444443321 00 24689999999999988888887 89999998754 68999999999999999999
Q ss_pred EeeccCCcccccCH-HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC----
Q 010897 208 AILGSTLTGEFEDV-KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY---- 282 (498)
Q Consensus 208 ~~~~~t~tG~~~~l-~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p---- 282 (498)
++.++ ++|.+.|+ ++|.++|+++ |+++++|++++.+..+ .. .+..++|+++.++|||+ .|
T Consensus 165 v~~~~-~~G~~~~~l~~i~~la~~~------g~~livD~~~~~~~~~-~~------~~~~~~d~~~~s~~K~~-~p~g~G 229 (398)
T cd00613 165 VQYPN-TLGVFEDLIKEIADIAHSA------GALVYVDGDNLNLTGL-KP------PGEYGADIVVGNLQKTG-VPHGGG 229 (398)
T ss_pred EECCC-CCceecchHHHHHHHHHhc------CCEEEEEeccccccCC-CC------hHHcCCCEEEeeccccC-CCCCCC
Confidence 99886 78999885 9999999999 9999999998654321 11 11225899999999998 54
Q ss_pred -CCeEEEEEeCCCCCCcccccc-cCccCCC--CC----------------Cccc-cCCCchHHHHHHHHHHHHhcHHHHH
Q 010897 283 -AGVGWVVWRTKDDLPDELVFH-INYLGSD--QP----------------TFTL-NFSKGSSQIIAQYYQFIRLGFEGYK 341 (498)
Q Consensus 283 -~g~g~~~~~~~~~l~~~~~~~-~~yl~~~--~~----------------~~~l-~~sr~~~~~~a~~~~l~~lg~~g~~ 341 (498)
+++|++++++. .. +.+... ..+.... .. ..+. .++.......+.++++..++.++++
T Consensus 230 gp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~ 307 (398)
T cd00613 230 GPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLK 307 (398)
T ss_pred CCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHH
Confidence 66888887642 22 111100 0000000 00 0000 0222233455666777788899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEee
Q 010897 342 NIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVV 421 (498)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v 421 (498)
++.++..++++++.+.|++++..... .....+.++|+++...+.+..+++++|.++|+.+.... ..+..++|++.
T Consensus 308 ~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~----~~~~~~lRis~ 382 (398)
T cd00613 308 EIAERAHLNANYLAKRLKEVGGVLPF-NGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY----LPVDGTLMIEP 382 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccC-CCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc----cCCCCeEEEEc
Confidence 99999999999999999998754422 22234567777743112456789999999998753211 12346799999
Q ss_pred cCCCCHHHHHHHHHHH
Q 010897 422 REDFSRSLVERLISHI 437 (498)
Q Consensus 422 ~~~~t~~~~~~l~~~l 437 (498)
+..+|.+|+|++++.|
T Consensus 383 ~~~~t~edid~~~~~L 398 (398)
T cd00613 383 TETETKEELDALLEAL 398 (398)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 9999999999888753
No 49
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.96 E-value=2.4e-26 Score=233.87 Aligned_cols=383 Identities=15% Similarity=0.111 Sum_probs=248.8
Q ss_pred HHHhhCCCCCCCCCCCCHHHHHHHHHHhhhccCCCCCcccccccCCC-hHH-HHHHHHH-Hhcc--------CCC--CCc
Q 010897 22 YVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWM-EPE-CDKLVMA-SINK--------NYV--DMD 88 (498)
Q Consensus 22 ~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~-~~~~l~~-~~~~--------n~~--~~~ 88 (498)
.++..+....+|++|.+.+.+..++.++-.++.|...+ .+.-+- +.. ...++.. .++- +.. .+.
T Consensus 20 ~~~~~~~~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~---~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~k 96 (444)
T TIGR03531 20 LIERLLEQRKIPEEGWDDETIELFLHELSVMDTNNFPN---NVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPK 96 (444)
T ss_pred HHHHHHHcCcCCccCCCHHHHHHHHHHHhcCCcCCCcc---ccCcCcccceeechhhhhcccceecCCCCcccccccCcc
Confidence 34455667799999999999999998876666544321 000000 000 1111111 0100 000 111
Q ss_pred --CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh
Q 010897 89 --EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (498)
Q Consensus 89 --~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s-ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~ 165 (498)
.++....+.+++.+++++++|.+.- ..+++++|+| .++.+++.+++.+ +..+++|+++..+|.
T Consensus 97 a~gss~~~~l~~~~e~~~~~~~G~~~~----~~a~~v~~~Tg~al~laL~alr~~----------~~~gd~VI~p~~th~ 162 (444)
T TIGR03531 97 AAGSSLLYKLTNKLVKDFLKLLGLRSI----KSAFVVPLATGMSLSLCLSALRHK----------RPKAKYVIWPRIDQK 162 (444)
T ss_pred ccCccHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHHcCCc----------CCCCCEEEEECcChH
Confidence 1234677888999999999999731 1278888888 7888888776531 012358999999999
Q ss_pred HHHHHHHHcCCeeEEEEe--cCCccccCHHHHHHHhhh---CCeEEEEeecc-CCcccccCHHHHHHHHHHhhcccCCCc
Q 010897 166 CWEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGS-TLTGEFEDVKLLHDLLTKKNEETGWDT 239 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~--~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~-t~tG~~~~l~~I~~la~~~~~~~~~~~ 239 (498)
+..+++.++|++++.|++ +++++.+|+++|+++|++ ++++++++.++ +..|..+|+++|+++|+++ |+
T Consensus 163 S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~------gI 236 (444)
T TIGR03531 163 SCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY------DI 236 (444)
T ss_pred HHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc------CC
Confidence 999999999999999995 566799999999999986 34555444443 4456899999999999999 99
Q ss_pred eEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCC
Q 010897 240 PIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFS 319 (498)
Q Consensus 240 ~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~s 319 (498)
|+|+|+|||.+. ++.....+..+....+|++++++||++.+|.++|++++++++.+ +. ....|.+.
T Consensus 237 ~lIvDaAyg~~~-~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~-~~--i~~~y~g~---------- 302 (444)
T TIGR03531 237 PHIVNNAYGLQS-NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFI-QE--ISKSYPGR---------- 302 (444)
T ss_pred EEEEECcCcCcC-hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHH-HH--HHHhccCC----------
Confidence 999999999643 12211111122233589999999999999988888878776543 22 12223221
Q ss_pred CchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 320 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 320 r~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.....+..+|+.+..+|.++|++++++..++++++.+.|+++. +.+++..+...--+++.+..-.+.+...|...|.
T Consensus 303 ~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~ 382 (444)
T TIGR03531 303 ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLY 382 (444)
T ss_pred CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHH
Confidence 1224567789999999999999999999999999999998753 3466644311112233443111345778889998
Q ss_pred hcCcEeeeecCCCC-----------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVPAYTMPAN-----------------AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 397 ~~G~~v~~~~~~~~-----------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+++.-.....+.. .....++-+...-..+++|+|.|++.|++++
T Consensus 383 ~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 383 SRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred hCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 88763211111111 0111233333333468889998888887653
No 50
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.8e-26 Score=228.75 Aligned_cols=328 Identities=20% Similarity=0.173 Sum_probs=245.9
Q ss_pred hhhccCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcC-CCCCCCCCcceeeecChh
Q 010897 49 ELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 49 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~s 127 (498)
.+.++.|.+ |.+++|.+.+.+...+.....+++. ... ++++.+++.+| .+. ..++.++|++
T Consensus 24 ~i~LssNen-------P~gp~~~~~~~~~~~~~~~~rYPd~--~~~----~l~~a~a~~~~~~~~-----~~V~~gnGsd 85 (356)
T COG0079 24 IIKLSSNEN-------PYGPPPKVIEAIRAALDKLNRYPDP--DYR----ELRAALAEYYGVVDP-----ENVLVGNGSD 85 (356)
T ss_pred ceeecCCCC-------CCCCCHHHHHHHHHHHHhhccCCCC--cHH----HHHHHHHHHhCCCCc-----ceEEEcCChH
Confidence 445665655 4567788888888877744443433 222 55566888888 443 2388899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEE
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~ 207 (498)
|.+.+.++++..+ ++.|+++.++|..|...++..|++++.|+..+ |.+|++.+.+.+.+++++|+
T Consensus 86 e~i~~l~~~~~~~-------------gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~ 150 (356)
T COG0079 86 ELIELLVRAFVEP-------------GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVF 150 (356)
T ss_pred HHHHHHHHHhhcC-------------CCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEE
Confidence 9999988888653 46899999999999999999999999999976 89999999999999999999
Q ss_pred EeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 208 ~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
+|+||||||...+.++|.+++...+. +.+|+||+||..|..+ +........+++.++...++-|++++.++|+
T Consensus 151 i~nPNNPTG~~~~~~~l~~l~~~~~~----~~~vVvDEAY~eF~~~---~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 151 LCNPNNPTGTLLPREELRALLEALPE----GGLVVIDEAYIEFSPE---SSLELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEeCchhhcCCc---hhhhhccCCCCEEEEEecHHhhhcchhceee
Confidence 99999999999999999999998743 7899999999998631 1111111234566666666669999999999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeE-
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFE- 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~- 365 (498)
++ .+++.+.. +......|. ...+++.++...+.+ +.+++..+...+.+.++.+.|++++ +.
T Consensus 224 ~i-a~~~~i~~--------l~~vr~p~~-------v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~ 286 (356)
T COG0079 224 AI-ANPELIAA--------LNKVRPPFN-------VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFG 286 (356)
T ss_pred cc-CCHHHHHH--------HHHhcCCCC-------CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCe
Confidence 66 44433211 111112222 244556666665554 4567888888889999999999998 55
Q ss_pred EeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+++. ..||+.++.+. .. ...+.+.|.++|++++.+.. ......++||+++ |++++++|+++|+++++.
T Consensus 287 v~pS--~aNFvlv~~~~--~~-~~~l~~~L~~~giivR~~~~--~~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 287 VFPS--QANFVLVRVPD--AE-AAALAEALLKKGILVRDCSS--VGLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred ecCC--CCcEEEEECCC--cc-HHHHHHHHHHCCEEEEeCCC--CCCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 6533 58999999854 23 56899999999999987643 2244568999999 899999999999988754
No 51
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=2.6e-26 Score=224.92 Aligned_cols=344 Identities=17% Similarity=0.121 Sum_probs=238.1
Q ss_pred cccccCCChHHHHHHHHHHhccCCCCCcCC-cch---HHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 61 ASFVTTWMEPECDKLVMASINKNYVDMDEY-PVT---TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~-~~~---~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
-...++++++.+.++|...+...+.++.+. .++ ..+ ++.++.+|+|+|+++.+ ++||+|+||+|.++++.
T Consensus 48 d~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~-E~aR~~VAklInAd~~d-----IiFts~ATEs~Nlvl~~ 121 (428)
T KOG1549|consen 48 DNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAV-EAAREQVAKLINADPSD-----IVFTSGATESNNLVLKG 121 (428)
T ss_pred ecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHH-HHHHHHHHHHhCCCCCc-----EEEeCCchHHHHHHHHH
Confidence 334466788999999888876644443332 322 224 46889999999998742 99999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHc---CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
...... .+ .+-.||+....|.|....++.+ |++++++|+.+ ++..|.+.+++.|+++|++|.+.+.||
T Consensus 122 v~~~~~-------~~-~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~-~~~~d~~~~~~~i~~~T~lv~I~~Vnn 192 (428)
T KOG1549|consen 122 VARFFG-------DK-TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED-SGLVDISKLREAIRSKTRLVSIMHVNN 192 (428)
T ss_pred hhcccc-------cc-ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc-cccccHHHHHHhcCCCceEEEEEeccc
Confidence 755321 10 1128999999999998887775 89999999984 588999999999999999999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCC
Q 010897 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (498)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~ 293 (498)
.+|...|+++|.++|++. ++.+|+|+||+-+-.+. |++.-++|.+++++|||+++| |+|++++|..
T Consensus 193 ~~gv~~Pv~EI~~icr~~------~v~v~~DaAQavG~i~v-------DV~eln~D~~s~s~HK~ygp~-~iGaLYvr~~ 258 (428)
T KOG1549|consen 193 EIGVLQPVKEIVKICREE------GVQVHVDAAQAVGKIPV-------DVQELNADFLSISAHKIYGPP-GIGALYVRRK 258 (428)
T ss_pred CccccccHHHHHHHhCcC------CcEEEeehhhhcCCccc-------cHHHcCchheeeecccccCCC-cceEEEEccC
Confidence 999999999999999999 99999999998775433 454457999999999987555 5999999962
Q ss_pred CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH--HHHHHHHHHHHHHHHHHHHHh-cCCCeEEeeCC
Q 010897 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--GYKNIMENCMGNARALREGLE-KTGRFEILSKD 370 (498)
Q Consensus 294 ~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~--g~~~~~~~~~~~a~~l~~~L~-~~~~~~~~~~~ 370 (498)
. ..+...+.+.++.+..---.|++....++.+-.+.+....+ +...++. ++...+...+. .++...+...+
T Consensus 259 ~---~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~~~~~ll~~i~~~~~~~~~~G~~ 332 (428)
T KOG1549|consen 259 R---PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---RLSEKLLMGIGQSLPEVTLNGSG 332 (428)
T ss_pred C---CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---HHHHHHHHHHhhhCchhhccCCc
Confidence 1 23344567777765443334677666777777777665432 1222222 34444544443 34544444433
Q ss_pred C--CccEEEEEecCCCCCC----HH---------------HHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHH
Q 010897 371 V--GVPLVAFSLKDSSAHT----VF---------------EISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSL 429 (498)
Q Consensus 371 ~--~~~~v~f~~~~~~~~~----~~---------------~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~ 429 (498)
. ..+.+.|.++...+.. .. +....|+..|.- .......+|++++-+++.+|
T Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~--------~~~~~~~iRis~G~y~t~~d 404 (428)
T KOG1549|consen 333 KSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVD--------EDLAHSSIRISIGRYTTEED 404 (428)
T ss_pred ccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcc--------hhhhcceeEEeeeeeCcHHH
Confidence 2 2345555553111111 11 111112222210 11335679999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 010897 430 VERLISHIEEVLKEIESL 447 (498)
Q Consensus 430 ~~~l~~~l~~~l~~l~~~ 447 (498)
++++++.+++.+..+...
T Consensus 405 i~~~~~~i~~~v~~~~~~ 422 (428)
T KOG1549|consen 405 IDYLVDAIKKLVSLLREM 422 (428)
T ss_pred HHHHHHHHHHHHHhcccc
Confidence 999999999988776544
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=7.1e-26 Score=230.25 Aligned_cols=338 Identities=16% Similarity=0.123 Sum_probs=237.0
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~ 144 (498)
|..+.+.+.++|...+ ..+ .+...+..+++++.+++++|.+.+. ....++.++++++..++.++..+
T Consensus 13 P~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~---~~i~~~~~gt~~l~~~~~~l~~~---- 79 (368)
T PRK13479 13 PLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY---TCVPLQGSGTFSVEAAIGSLVPR---- 79 (368)
T ss_pred CCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCcHHHHHHHHHhccCC----
Confidence 3344566666554332 222 2334456778999999999986421 23778889999998888777432
Q ss_pred HHhcCCCCCCcEEEEcCCchhHH--HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC--CeEEEEeeccCCcccccC
Q 010897 145 RKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFED 220 (498)
Q Consensus 145 ~~~~g~~~~~~~Iv~s~~~h~~~--~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~--t~~v~~~~~~t~tG~~~~ 220 (498)
++.|++....++.. ...++..|++++.++++++ +.+|+++++++++++ +++|++++++|+||...|
T Consensus 80 ---------~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 80 ---------DGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred ---------CCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 34666655555543 5778889999999999764 679999999999754 567889999999999999
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccc
Q 010897 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~ 300 (498)
+++|.++|+++ +++++||++++.+..+ .++...++|.+..++|||+++|+|+|+++++.+ .+....
T Consensus 150 ~~~i~~l~~~~------~~~livDa~~~~g~~~-------~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~ 215 (368)
T PRK13479 150 LDEIAAVAKRH------GKRLIVDAMSSFGAIP-------IDIAELGIDALISSANKCIEGVPGFGFVIARRS-ELEACK 215 (368)
T ss_pred HHHHHHHHHHc------CCEEEEEcccccCCcc-------ccccccCceEEEecCccccccCCCceEEEECHH-HHHHhh
Confidence 99999999999 9999999877543322 123223588999999999999999999998653 211100
Q ss_pred ccccCccCC-------CCCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-
Q 010897 301 VFHINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDV- 371 (498)
Q Consensus 301 ~~~~~yl~~-------~~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~- 371 (498)
.....|..+ ........++.+...++++.+++..+..+ ++.++.++..++++++.+.|++++ ++++.++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 294 (368)
T PRK13479 216 GNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG-FEPLLDAEI 294 (368)
T ss_pred cCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CcccCCchh
Confidence 001111100 00000111345556677788888877655 478888999999999999999985 87765431
Q ss_pred Ccc-EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 372 GVP-LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 372 ~~~-~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
..+ +++|.++.....+..++.++|.++|+.+..... ....++|+++...++.++++++++.|+++++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~----~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 295 QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKL----TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 233 466776543345778999999999998854321 123568999766789999999999999988754
No 53
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=7e-26 Score=229.00 Aligned_cols=333 Identities=15% Similarity=0.130 Sum_probs=234.1
Q ss_pred CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 66 ~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
..+++.+.+++...++. + .+....+..++++.+++++|.+++. ..+.++.|+|+++..++.++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~---~~i~~~~~gt~~l~~~~~~~~~~----- 73 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH---TCVLLQGSGTFAVEATIGSLVPR----- 73 (355)
T ss_pred CCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC---cEEEEeCCcHHHHHHHHHhccCC-----
Confidence 34567777777663322 2 1223366778999999999998632 23678889999998888776432
Q ss_pred HhcCCCCCCcE-EEEcCCchhH-HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC--CeEEEEeeccCCcccccCH
Q 010897 146 KEQGKPYDKPN-IVTGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDV 221 (498)
Q Consensus 146 ~~~g~~~~~~~-Iv~s~~~h~~-~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~--t~~v~~~~~~t~tG~~~~l 221 (498)
++. |+++...|.. +..+++..|++++.++.+++ +.+|++++++++.++ ++.|++++++|++|.+.|+
T Consensus 74 --------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~ 144 (355)
T TIGR03301 74 --------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNPL 144 (355)
T ss_pred --------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHH
Confidence 244 5555555554 67788899999999998764 679999999999754 4678888999999999999
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccc
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~ 301 (498)
++|.++|+++ ++++++|++++.+..++ ++...++|++..++|||+++++|+|+++++++ .+.....
T Consensus 145 ~~i~~l~~~~------~~~livD~~~s~g~~~~-------~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~ 210 (355)
T TIGR03301 145 EAIAKVARSH------GAVLIVDAMSSFGAIPI-------DIEELDVDALIASANKCLEGVPGFGFVIARRD-LLEASAG 210 (355)
T ss_pred HHHHHHHHHc------CCEEEEEeccccCCccc-------chhhcCccEEEecCCcccccCCceeEEEECHH-HHHHhhC
Confidence 9999999999 99999999876543332 23223689999999999999999999998753 2111100
Q ss_pred cccCccCCC-------CCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-C
Q 010897 302 FHINYLGSD-------QPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDV-G 372 (498)
Q Consensus 302 ~~~~yl~~~-------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~ 372 (498)
....+.... .......++.+...+.++..+++.+..+| +.++.++..++++++.+.|++++ ++++.++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~ 289 (355)
T TIGR03301 211 NARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQ 289 (355)
T ss_pred CCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCC
Confidence 000110000 00001123444455677777888887776 88889999999999999999885 77665432 2
Q ss_pred cc-EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 373 VP-LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 373 ~~-~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+ +++|+++.....+..++.++|.++|+.+..... ....++|+++...++.++++++++.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~----~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 290 SPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKL----TLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCcc----ccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 33 456777532234567899999999988754321 11267999998888999999999998865
No 54
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=3.5e-25 Score=225.02 Aligned_cols=299 Identities=17% Similarity=0.128 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCC
Q 010897 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (498)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~ 176 (498)
..++++.+|+++|.+. ..+++|+++++..++.++..+ +++|+++.+.|++...+++..|+
T Consensus 53 ~~~~~e~lA~~~g~~~-------~~i~~g~~~a~~~~~~~l~~~-------------gd~Vl~~~~~h~s~~~~~~~~g~ 112 (370)
T TIGR02539 53 IHDFLEDLAEFLGMDE-------ARVTHGAREGKFAVMHALCKE-------------GDWVVLDGLAHYTSYVAAERAGL 112 (370)
T ss_pred HHHHHHHHHHHhCCCc-------eEEECChHHHHHHHHHHhhCC-------------CCEEEECCcccHHHHHHHHHcCC
Confidence 3355666999999975 677899999998888776432 46899999999988888999999
Q ss_pred eeEEEEecC-CccccCHHHHHHHhhh-------CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 177 ELKEVKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 177 ~~~~v~~~~-~~~~~d~~~L~~~i~~-------~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
+++.+|.++ +++.+|+++|++++++ ++++|++++++|++|.+.|+++|.++|+++ |++++||+||+
T Consensus 113 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~------~~~livDea~~ 186 (370)
T TIGR02539 113 NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK------GVPLLLNCAYT 186 (370)
T ss_pred EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc------CCeEEEECccc
Confidence 999999863 3478999999999863 678999999999999999999999999999 99999999998
Q ss_pred cccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccC-ccCCCCCCccccCCCchHHHHH
Q 010897 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIA 327 (498)
Q Consensus 249 g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~-yl~~~~~~~~l~~sr~~~~~~a 327 (498)
.+..+.. .....+|++..++||+++++.++|+++.+. +.+ +.+..... |..+.. . .+.++.....+.+
T Consensus 187 ~g~~~~~-------~~~~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i-~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 255 (370)
T TIGR02539 187 VGRMPVS-------AKEIGADFIVGSGHKSMAASGPCGVLGMSE-EWE-DIVLRKSRYSPVKEV-E-LLGCTSRGAPIVT 255 (370)
T ss_pred cCCcCCC-------HHHcCCCEEEeeCcccccCCCCEEEEEECH-HHH-hhhcccccCCcccee-e-eecccccccHHHH
Confidence 7643221 111247888899999998777889888754 222 22111111 111110 0 0111222223444
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee-CCCCccEEEEEecCC------CCCCHHHHHHHHHhcCc
Q 010897 328 QYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS-KDVGVPLVAFSLKDS------SAHTVFEISEGLRKFGW 400 (498)
Q Consensus 328 ~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~~v~f~~~~~------~~~~~~~l~~~L~~~G~ 400 (498)
+++++... ..+.+...+..+++++|++.|++++ ++++. .++..+++.++++.. +..+...+.++|.++|+
T Consensus 256 ~~~al~~~--~~~l~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI 332 (370)
T TIGR02539 256 MMASFPHV--VERVKRWDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGI 332 (370)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCC
Confidence 44444321 2233344555666789999999997 88753 233688998886421 01134579999999998
Q ss_pred E-eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 401 I-VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 401 ~-v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
. ++ + ....++|+++. ..+.++++++++.|++++++
T Consensus 333 ~~ir----~---~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 333 HGIR----S---GQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred cccc----C---CcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 6 32 1 12357999984 45999999999999988764
No 55
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=5.1e-25 Score=225.97 Aligned_cols=342 Identities=16% Similarity=0.104 Sum_probs=230.9
Q ss_pred CCCCCcccccc--cCCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 54 GNPRLNLASFV--TTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 54 ~~p~~~~~~~~--~~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
|.+.+++.+.- ...++|++.+++.+++......+..++ +...+..++++.+++++|.+. .++++|+++
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~-------~ii~~~~~~ 109 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED-------TILYASCFD 109 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEECchHH
Confidence 33334444433 223467888888888766322333333 445556677788999999853 777789999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh------C
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------N 202 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~------~ 202 (498)
|+..++.++.++ +++|+++++.|.++...++..+.....++ .+|+++|++++.+ +
T Consensus 110 a~~~~~~~l~~~-------------gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 110 ANGGLFETLLGA-------------EDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred HHHHHHHHhCCC-------------CCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCC
Confidence 998766665322 47999999999999999988887764432 3789999998875 6
Q ss_pred CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccCCC
Q 010897 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV 281 (498)
Q Consensus 203 t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~ 281 (498)
|++|++.+..|+||.+.|+++|.++|+++ |+++++|++|+.+..+..........+ .+++|+++.+.||++.+
T Consensus 171 ~~~v~~~~v~~~tG~~~~l~~i~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g 244 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAPLDEICDLADKY------DALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG 244 (393)
T ss_pred ceEEEEeCCccCCCCcCCHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC
Confidence 88888888899999999999999999999 999999999964432111000000111 13588999999999765
Q ss_pred CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010897 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
.+.||++.+ ++.. ..+... ...+...++.+...+.+...++..+ +..++..++..++++++.+.|++.
T Consensus 245 -~r~G~~~~~-~~~~-~~l~~~-------~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 245 -ASGGFTTAR-KEVV-ELLRQR-------SRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred -CCcEEEEeC-HHHH-HHHHHh-------CccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc
Confidence 466887643 2222 111100 0111122333333334444555443 234567788889999999999887
Q ss_pred CCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+ +++..+ ..+++.+.+.+ ..+..++++.|.++|+.+.....|....+...+|++++..+|.++++++++.|+++.
T Consensus 313 g-~~~~~~--~~~~~~i~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 313 G-FDIKPA--DHPIIPVMLYD--AVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred C-CCCCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 4 776532 35667666532 234678999999999887655444322344579999999899999999999999887
Q ss_pred HHH
Q 010897 442 KEI 444 (498)
Q Consensus 442 ~~l 444 (498)
+.+
T Consensus 388 ~~~ 390 (393)
T TIGR01822 388 REL 390 (393)
T ss_pred HHh
Confidence 653
No 56
>PLN02721 threonine aldolase
Probab=99.94 E-value=2.4e-25 Score=225.00 Aligned_cols=325 Identities=15% Similarity=0.123 Sum_probs=212.5
Q ss_pred cccccCCChHHHHHHHHHH-hccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 61 ASFVTTWMEPECDKLVMAS-INKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~~-~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
.+..++.+.+.+.+++... .+....++ .|... ++++.+++++|.+. ++++++|+++++.++.+...
T Consensus 11 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~----~l~~~la~~~~~~~-------~~~~~~Gs~a~~~~l~~~~~ 77 (353)
T PLN02721 11 RSDTVTKPTDAMRAAMANAEVDDDVLGY--DPTAL----RLEEEMAKIFGKEA-------ALFVPSGTMGNLISVLVHCD 77 (353)
T ss_pred hcccccCCCHHHHHHHHhccCCCcccCC--CHHHH----HHHHHHHHHhCCce-------eEEecCccHHHHHHHHHHcc
Confidence 3333445667787777654 22222222 23333 45555888888764 67888889898877776533
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHH---HHHHcCCeeEEEEecCCccccCHHHHHHHhh-------hCCeEEEEe
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVD-------ENTICVAAI 209 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-------~~t~~v~~~ 209 (498)
. .+++|++++++|+++.+ .+...|++++.+|.+++ +.+|++++++.++ +++++|+++
T Consensus 78 ~------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 144 (353)
T PLN02721 78 V------------RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLE 144 (353)
T ss_pred C------------CCCeEEEcCccceehhcccchhhhcCceeEecCCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEe
Confidence 1 14789999999986655 57788999999998764 7899999999998 578888887
Q ss_pred e-ccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe
Q 010897 210 L-GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (498)
Q Consensus 210 ~-~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~ 285 (498)
. ++|++|.+.| +++|.++|+++ |+++|+|+||..+.. .......+-...++|++.+++||++.++.
T Consensus 145 ~~~~np~G~~~~~~~l~~l~~l~~~~------g~~livD~a~~~~~~--~~~~~~~~~~~~~~d~~~~s~sK~l~~~~-- 214 (353)
T PLN02721 145 NTHANCGGRCLSVEYTDKVGELAKRH------GLKLHIDGARIFNAS--VALGVPVHRLVKAADSVSVCLSKGLGAPV-- 214 (353)
T ss_pred ccccccCCccccHHHHHHHHHHHHHc------CCEEEEEchhhhcch--hhhCCCHHHHhhhCCEEEEecccccCCce--
Confidence 7 4677888755 78999999999 999999999854321 10111111112367888999999987654
Q ss_pred EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 286 g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
|++++.+++.+.. +.....+.+ ++....... ..+++..+ +...+.+++..++++++.+.|+++++++
T Consensus 215 G~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~-~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 281 (353)
T PLN02721 215 GSVIVGSKSFIRK-AKRLRKTLG---------GGMRQVGVL-AAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLR 281 (353)
T ss_pred eeEEecCHHHHHh-HHHHHHhcC---------CCeehhHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 4444455433211 111111111 111001111 11222222 2223344555678889999999997786
Q ss_pred E-eeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 366 I-LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 366 ~-~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+ +.++ ..+++.|+++...+.+...++++|.++|+.+... +..++|++++...+.++++++++.|++++.
T Consensus 282 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 282 VNVAAV-ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-------NSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred EecCCc-cceEEEEEccCCccccHHHHHHHHHhCCcEEecC-------CCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 5 4443 5678888885422246789999999999987532 235799999878899999999999988764
No 57
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=5.5e-25 Score=226.53 Aligned_cols=327 Identities=13% Similarity=0.057 Sum_probs=227.7
Q ss_pred CChHHHHHHHHHHhccCCCC---CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
..+|++.+++.+++.+.+.. ...+........++.+.+++++|.+. .++++||++|+..++.++...
T Consensus 68 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~sG~~An~~~l~~l~~~--- 137 (407)
T PRK07179 68 SGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES-------CLLCQSGWAANVGLLQTIADP--- 137 (407)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC---
Confidence 45688888888887653211 11122222344556667999999864 688999999999888876432
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHH
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~ 222 (498)
++.|+++...|.++...++..|+++..++ ..|+++|++++++ ++++|++..++|++|.+.|++
T Consensus 138 ----------g~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~ 201 (407)
T PRK07179 138 ----------NTPVYIDFFAHMSLWEGVRAAGAQAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLA 201 (407)
T ss_pred ----------CCEEEEECCcCHHHHHHHHHCCCeEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHH
Confidence 36789999999999988888888765443 2589999999986 478888899999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC-CCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~-~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~ 301 (498)
+|.++|+++ |+++|+|++|+.+..+.........+++ +.+|+++.+.||++.+ ++|+++.++ +.. +.+.
T Consensus 202 ~I~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~-~~~-~~~~ 271 (407)
T PRK07179 202 DIVDIAEEF------GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPR-ELA-EYVP 271 (407)
T ss_pred HHHHHHHHc------CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCH-HHH-HHHH
Confidence 999999999 9999999999865321110000011222 3579999999999864 478887653 221 1111
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (498)
. .. ......++.+...+.+..++++.+.. ..+..++..+++++|.+.|++++ +++.+ ..+++.+.+.
T Consensus 272 ~----~~---~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-~~v~~---~~~i~~l~~~ 338 (407)
T PRK07179 272 F----VS---YPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELG-YNIRS---ESQIIALETG 338 (407)
T ss_pred H----hC---cCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC-CCCCC---CCCEEEEEeC
Confidence 0 00 00011133333444445555655422 24567888999999999999985 77662 3577777763
Q ss_pred CCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 382 DSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 382 ~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
. ..+...+.+.|.++|+.+..++.|.......++|++++..+|.++++++++.|++++++.
T Consensus 339 ~--~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 339 S--ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred C--HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 2 224567889999999886655555443446789999999999999999999999887753
No 58
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-24 Score=220.06 Aligned_cols=340 Identities=13% Similarity=0.038 Sum_probs=232.0
Q ss_pred cccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 010897 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (498)
Q Consensus 59 ~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~ 137 (498)
+|..+.+. ++++.+.+++.+.+......|....+..++++.+.+++.+.+|.+.+. ..+++|+|+++++.+++.++
T Consensus 28 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l 104 (382)
T PRK06108 28 PLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPP---ERIAVTSSGVQALMLAAQAL 104 (382)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCc---ceEEEeCChHHHHHHHHHHh
Confidence 34443333 346778888888776654446666688899999999999988854322 23889999999998888776
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC--CccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
.++ ++.|++++++|..+...++.+|++++.+|++. ++|.+|+++|++.+++++++|++++|+|||
T Consensus 105 ~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPt 171 (382)
T PRK06108 105 VGP-------------GDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPT 171 (382)
T ss_pred cCC-------------CCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCC
Confidence 432 46899999999999999999999999999973 347899999999998889999999999999
Q ss_pred cccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccC-CCCCCeEEE
Q 010897 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVYAGVGWV 288 (498)
Q Consensus 216 G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~ 288 (498)
|.+. ++++|.++|+++ ++++++|++|+++.... ..... .++ ....-..+..+.+|.+ +++.++||+
T Consensus 172 G~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~ 244 (382)
T PRK06108 172 GWTASRDDLRAILAHCRRH------GLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244 (382)
T ss_pred CcccCHHHHHHHHHHHHHC------CcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeee
Confidence 9875 467888999999 99999999999875310 00111 111 1112345667888864 577889999
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEI 366 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 366 (498)
+.+. +.+ +.+.....+.. . ....+.|.++...+ +.+.+++..++..++++++.+.|++++++.+
T Consensus 245 ~~~~-~~~-~~~~~~~~~~~---------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (382)
T PRK06108 245 VAPP-ALG-QVLEKLIEYNT---------S---CVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEV 310 (382)
T ss_pred eCCH-HHH-HHHHHHHHhcc---------c---CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 8643 221 21111001110 0 11223344444444 3344577788888899999999998877877
Q ss_pred eeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
..+. +..++.+++++ ..+..+++++|. ++|+.+.....- ...+..++|++++. +.+++++.++.|++++
T Consensus 311 ~~p~-~g~~~~~~l~~--~~~~~~~~~~ll~~~gV~v~pg~~f-~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 311 AKPD-GAMYAFFRIPG--VTDSLALAKRLVDEAGLGLAPGTAF-GPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred cCCC-eeEEEEEeCCC--CCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 6442 34455567743 346778999885 579877432211 11235689999975 6677776666666554
No 59
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.6e-24 Score=216.22 Aligned_cols=358 Identities=14% Similarity=0.063 Sum_probs=234.2
Q ss_pred ccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhccCCCCCcccccc-cCCChHHHHHHHHHHhccCCCCCcCCcchH
Q 010897 16 STFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFV-TTWMEPECDKLVMASINKNYVDMDEYPVTT 94 (498)
Q Consensus 16 ~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~ 94 (498)
++-|-+.++..+.+......+..+.+..+... ..+...++|.... +.+++|.+.+.+.+... ...|. .+...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~--~~~Yp-~~~~~ 89 (380)
T PLN03026 17 STSGDSFIRKHILQLAPYQPILPFEVLSAQLG----RKPEDIVKLDANENPYGPPPEVLEALGNMKF--PYVYP-DPESR 89 (380)
T ss_pred cccHhHHhhHHhhcCCCCCCCCChHHHHHHhC----CCccceEEccCCCCCCCCCHHHHHHHHhhHh--hccCC-CCCHH
Confidence 34455566655555443333444444443331 1111222333332 33556777776654211 11121 12322
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHc
Q 010897 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF 174 (498)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~ 174 (498)
++++++++++|++++ .+++|+|+++++.+++.++.++ +++|++++++|..+...++..
T Consensus 90 ----~lr~~ia~~~~~~~~-----~I~~t~Ga~~~i~~~~~~~~~~-------------gd~Vlv~~P~y~~y~~~~~~~ 147 (380)
T PLN03026 90 ----RLRAALAEDSGLESE-----NILVGCGADELIDLLMRCVLDP-------------GDKIIDCPPTFGMYVFDAAVN 147 (380)
T ss_pred ----HHHHHHHHHhCcChh-----hEEEcCCHHHHHHHHHHHhcCC-------------CCEEEEcCCChHHHHHHHHHc
Confidence 466678888898653 3889999999998888776432 468999999999999999999
Q ss_pred CCeeEEEEecCCccccCHHHHHHHh-hhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i-~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
|++++.++++++ +.+|+++|++++ ++++++|++++|+||||.+.|.+++.++++ . .+++++|++|..+..
T Consensus 148 g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~-~------~~~vi~DeaY~~~~~- 218 (380)
T PLN03026 148 GAEVIKVPRTPD-FSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILE-L------PILVVLDEAYIEFST- 218 (380)
T ss_pred CCEEEEeecCCC-CCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHh-c------CCEEEEECcchhhcC-
Confidence 999999998754 889999999999 678999999999999999999999999996 4 489999999987642
Q ss_pred ccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHH
Q 010897 254 FLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ 331 (498)
Q Consensus 254 ~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~ 331 (498)
........ ..+++ ++.-+..|.+ +++.++||++.. ++.+ ..+. .....+. ...++|.++
T Consensus 219 --~~~~~~~~~~~~~v-iv~~SfSK~~glaGlRiGy~~~~-~~~i-~~l~-------~~~~~~~-------~~~~~q~aa 279 (380)
T PLN03026 219 --QESRMKWVKKYDNL-IVLRTFSKRAGLAGLRVGYGAFP-LSII-EYLW-------RAKQPYN-------VSVAAEVAA 279 (380)
T ss_pred --CcchHHHHHhCCCE-EEEecchHhhcCccccceeeecC-HHHH-HHHH-------HhcCCCC-------CCHHHHHHH
Confidence 11111111 22343 4445666755 588899999843 2221 1110 0000111 223445555
Q ss_pred HHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC
Q 010897 332 FIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN 410 (498)
Q Consensus 332 l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~ 410 (498)
...+.. +-+++..+...+.++++.+.|++++.+.+. +++.+++.+++++ +.+..++.++|.++|+.++.+..
T Consensus 280 ~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--p~~~~f~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~--- 352 (380)
T PLN03026 280 CAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPY--PSDANFILCRVTS--GRDAKKLKEDLAKMGVMVRHYNS--- 352 (380)
T ss_pred HHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEC--CCCCeEEEEECCC--CCCHHHHHHHHHHCCeEEEECCC---
Confidence 555543 334666777788899999999998755553 2367888888753 35678999999999998865422
Q ss_pred CCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 411 AENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 411 ~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.....++|++++ +.+++++|+++|+++
T Consensus 353 ~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 353 KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 123458999998 678888888888653
No 60
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=4.8e-24 Score=210.11 Aligned_cols=335 Identities=17% Similarity=0.133 Sum_probs=248.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
..++.+.++| .....+ .-+|....+-+++++.+..+++.+.. ....++.+||.++..++..+..+
T Consensus 15 ~v~~~V~~am----~~~~~~-h~s~~F~~~~~~~~~~L~~v~~t~~~----~~~ll~gsGt~amEAav~sl~~p------ 79 (383)
T COG0075 15 PVPPRVLLAM----ARPMVG-HRSPDFVGIMKEVLEKLRKVFGTENG----DVVLLSGSGTLAMEAAVASLVEP------ 79 (383)
T ss_pred CCCHHHHHHh----cCCCCC-CCCHHHHHHHHHHHHHHHHHhcCCCC----cEEEEcCCcHHHHHHHHHhccCC------
Confidence 3455555544 343332 34677888888999999999998731 23566667777776666655443
Q ss_pred hcCCCCCCcEEEEcCCchh--HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC--CeEEEEeeccCCcccccCHH
Q 010897 147 EQGKPYDKPNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVK 222 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~--~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~--t~~v~~~~~~t~tG~~~~l~ 222 (498)
+++|++.....+ -|...+++.|++++.+.+.++ -.+|+++++++++++ .+.|.+++..|+||.+.|++
T Consensus 80 -------gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~ 151 (383)
T COG0075 80 -------GDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWG-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLK 151 (383)
T ss_pred -------CCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHH
Confidence 457776666555 688899999999999999875 579999999999954 56899999999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
+|++++++| |.+++||++.+.+..++. +...++|.+...++|++.+|+|.|++.++++..- .....
T Consensus 152 ~I~~~~k~~------g~l~iVDaVsS~Gg~~~~-------vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~ 217 (383)
T COG0075 152 EIAKAAKEH------GALLIVDAVSSLGGEPLK-------VDEWGIDVAITGSQKALGAPPGLAFVAVSERALE-AIEER 217 (383)
T ss_pred HHHHHHHHc------CCEEEEEecccCCCcccc-------hhhcCccEEEecCchhccCCCccceeEECHHHHH-HHhcC
Confidence 999999999 999999999875554442 2334699999999999999999999998765321 11001
Q ss_pred -cc-CccC------CCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC--C
Q 010897 303 -HI-NYLG------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--G 372 (498)
Q Consensus 303 -~~-~yl~------~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~ 372 (498)
.+ -|+. .........+|.+...+.++..+|+.+..+|++.+++++.++++++++.++++| |+++.++. .
T Consensus 218 ~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~~~~s 296 (383)
T COG0075 218 KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG-LELFADPERRS 296 (383)
T ss_pred CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCcccCC
Confidence 11 1221 111113344788888899999999999999999999999999999999999998 99887432 3
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
..+++|..+. +.+..++...|+++ |+.+.....+ ....++||..+...+..++...+.+|+.++.++
T Consensus 297 ~tvta~~~P~--g~~~~~~~~~~~~~~g~~i~gg~~~---l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 297 PTVTAIKVPE--GVDDKKVRRALLKEYGVEIAGGQGP---LKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred CceEEEECCC--CCCcHHHHHHHHHhCCEEecccccc---cCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 3566777743 45543444455554 7666443322 345789999999889999999999999988765
No 61
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=1.6e-23 Score=216.44 Aligned_cols=336 Identities=14% Similarity=0.086 Sum_probs=224.7
Q ss_pred CChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
.+++++.+++.+++..+. ..|....+..++++.+.+++.+..|.+.+. ..+++|+|+++|+.+++.++.++
T Consensus 69 ~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~v~it~G~~~al~l~~~~l~~~----- 140 (430)
T PLN00145 69 RTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST---DDIYLTAGCAQAIEIIMSVLAQP----- 140 (430)
T ss_pred CCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh---hhEEEeCCHHHHHHHHHHHhcCC-----
Confidence 345778888888876543 245555677888888888887766665432 24899999999999988887432
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---H
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---V 221 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l 221 (498)
+++|++++++|..|...+...|++++.+++. +++|.+|+++|+++++++++++++++|+||||.+.+ +
T Consensus 141 --------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l 212 (430)
T PLN00145 141 --------GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHL 212 (430)
T ss_pred --------CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHH
Confidence 4789999999999999999999999999874 345899999999999999999999999999999987 7
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-Ccc-cc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~~-~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
++|.++|+++ |++|++|++|+.+.. .... ... .+ ....+.++..-++.|+.++.++||++..++..+..
T Consensus 213 ~~i~~~a~~~------~i~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~ 284 (430)
T PLN00145 213 AKIAETARKL------GILVIADEVYDHLTF--GSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILK 284 (430)
T ss_pred HHHHHHHHHc------CCEEEEeccchhhcc--CCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhh
Confidence 7888889999 999999999998752 1111 110 11 12234444444444589999999999765432211
Q ss_pred ccc--cc-cCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC
Q 010897 299 ELV--FH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (498)
Q Consensus 299 ~~~--~~-~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (498)
... .. ..+.. +... ...+.|.++...+. .+.+++..+...+.++.+.+.|++++++.....+.+
T Consensus 285 ~~~~~~~~~~~~~-------~~~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~g 354 (430)
T PLN00145 285 ETKVVDSIRNYLN-------ISTD---PATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEG 354 (430)
T ss_pred hhHHHHHHHHHhc-------ccCC---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCe
Confidence 100 00 00110 0000 12233444444443 345677888888899999999999877765433446
Q ss_pred ccEEEEEecCC--CC-CCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDS--SA-HTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 373 ~~~v~f~~~~~--~~-~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
..++.++++.. .+ .+..+++.+|. ++|+.+...... ...+++|+++.. ..+.++..++.|++++
T Consensus 355 a~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f---g~~~~lRis~~~--~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 355 SMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL---GMKNWLRITFAI--DPPSLEDGLERLKSFC 422 (430)
T ss_pred eeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc---CCCCeEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 66777777421 11 24567776655 567776432221 124689999973 4444544444444444
No 62
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=6.4e-24 Score=220.78 Aligned_cols=365 Identities=16% Similarity=0.097 Sum_probs=241.1
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCC--CCCc-----CCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--VDMD-----EYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~--~~~~-----~~~~~~~le~~~~~~la~l~g~~ 111 (498)
..++.+.+.+.-..+ ...+||..-- ..++|.+.+++...+...+ .+++ .......+|+.+++.++++||.+
T Consensus 19 d~~~~~~~~~~~~~~-~~~l~l~~se-n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~ 96 (452)
T PTZ00094 19 DPELYELIEKEKERQ-IEGLELIASE-NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD 96 (452)
T ss_pred CHHHHHHHHHHHHHH-HcCeeEeccc-ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC
Confidence 456666665432221 2334433321 2467888888888776544 2221 11235677767889999999986
Q ss_pred CCCCCCcceeee---cChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHH----------cCCee
Q 010897 112 VADDKTAVGVGT---VGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----------FEVEL 178 (498)
Q Consensus 112 ~~~~~~~~~~~t---~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~----------~g~~~ 178 (498)
.++ .+++ ++|++||++++.++.++ +++|++++..|.+....+.. .++++
T Consensus 97 ~~~-----~~~~~~~~sgt~an~~v~~al~~~-------------gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~ 158 (452)
T PTZ00094 97 PEE-----WGVNVQPYSGSPANFAVYTALLQP-------------HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFES 158 (452)
T ss_pred ccc-----ceeecCCCchHHHHHHHHHHhcCC-------------CCEEEecccccCCcccccccccccccccceeeeee
Confidence 531 3334 78999999888887432 46899998888765443321 12334
Q ss_pred EEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~ 257 (498)
..++++.+ +.+|+++|++++.+ ++++|++. ++.+|...|+++|.++|+++ |+++|||+||+.+..+....
T Consensus 159 ~~~~~~~~-g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~------ga~l~vDaaq~~G~i~~~~~ 229 (452)
T PTZ00094 159 LPYQVNEK-GLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSV------GAYLMADIAHTSGLVAAGVL 229 (452)
T ss_pred eecccCCC-CCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHc------CCEEEEeccchhccccCCCC
Confidence 45556654 78999999999965 56666543 44689999999999999999 99999999998776432110
Q ss_pred CCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH
Q 010897 258 DLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (498)
Q Consensus 258 ~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~ 337 (498)
.. ...++|++++++|||+++|.| |++++++. .. ..+. ..+.... ...+.|+.....++++.++++.+..
T Consensus 230 --~~--~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~-~~l~---~~~~~~~-~p~~~G~~~~~~iaal~~al~~~~~ 298 (452)
T PTZ00094 230 --PS--PFPYADVVTTTTHKSLRGPRS-GLIFYRKK-VK-PDIE---NKINEAV-FPGLQGGPHNHQIAAIAVQLKEVQS 298 (452)
T ss_pred --CC--CCCCCcEEEcCCccCCCCCCc-eEEEEecc-cc-hHHH---Hhhcccc-CCCCCCCchHHHHHHHHHHHHHHhC
Confidence 11 123699999999999999998 77777653 21 1110 0010000 0012345555677888888888866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC--CCCee
Q 010897 338 EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN--AENVA 415 (498)
Q Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~--~~~~~ 415 (498)
.+++++.++..+++++|.+.|.+. ++++..+.....++.+.+. ..+.+...+...|.+.||.+.....|.. .....
T Consensus 299 ~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~-~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~ 376 (452)
T PTZ00094 299 PEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLR-PFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPS 376 (452)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCC-cCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCC
Confidence 778888899999999999999887 4888753211223333332 2246778899999889998853222211 12246
Q ss_pred EEEEeecCCCC----HHHHHHHHHHHHHHHHHHH
Q 010897 416 VLRVVVREDFS----RSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 416 ~lRv~v~~~~t----~~~~~~l~~~l~~~l~~l~ 445 (498)
.+|++++..+| .+|++++++.|.+++....
T Consensus 377 ~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~ 410 (452)
T PTZ00094 377 GVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQ 410 (452)
T ss_pred eEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHh
Confidence 79999976655 8999999999999987643
No 63
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=3.5e-24 Score=236.40 Aligned_cols=346 Identities=16% Similarity=0.088 Sum_probs=241.5
Q ss_pred HHHHHHHHHHhcc---CCCC-CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 70 PECDKLVMASINK---NYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 70 ~~~~~~l~~~~~~---n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
..+.+++...+.. |+.. +..+....++.+++++.+++++|.++++ ..+++|+|+|+|+.++..++. |.
T Consensus 49 ~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~---~~VvFtsnaT~alnlva~~l~--~~--- 120 (805)
T PLN02724 49 SQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSD---YACVFTSGATAALKLVGETFP--WS--- 120 (805)
T ss_pred HHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccc---eEEEEeCChHHHHHHHHHHCC--CC---
Confidence 3456655555432 3322 1123345666778999999999997532 237999999999987766542 11
Q ss_pred HhcCCCCCCcEEEEcCCchhHHH---HHHHHcCCeeEEEEecC-------CccccCH--HHHHHHhh----------hCC
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWE---KFARYFEVELKEVKLEE-------GYYVMNP--VKAVELVD----------ENT 203 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~---~~~~~~g~~~~~v~~~~-------~~~~~d~--~~L~~~i~----------~~t 203 (498)
.+++||++...|.+.. ..++..|++++.++++. +.+.+|+ ++|++.+. ++|
T Consensus 121 -------~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 121 -------SESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred -------CCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 1468999888887544 44556699999998861 1234444 56776542 456
Q ss_pred eEEEEeeccCCcccccCHHHHHHHHHHhhccc--CCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCC
Q 010897 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEET--GWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~--~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~ 281 (498)
++|++++.+|.||.+.|++.|..+++...... ..+++++||+|++.+..|+ |+...++|++++|+|||+++
T Consensus 194 ~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~pi-------Dv~~~~~Dfl~~S~HK~~Gg 266 (805)
T PLN02724 194 NLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPP-------DLSRYPADFVVVSFYKIFGY 266 (805)
T ss_pred ceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCC-------ChhhcCCCEEEEecceeccC
Confidence 89999999999999999998765554320000 0036799999998766544 34334699999999999988
Q ss_pred CCCeEEEEEeCCCCCCcccccccCccCCCC------------------CCccccCCCchHHHHHHHHHHHHhcHHHHHHH
Q 010897 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQ------------------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~------------------~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~ 343 (498)
|.|+|+++++.+. +. . ..+.+.++.. ..| -.||.+...++++.++++.+...|+.++
T Consensus 267 P~G~G~L~vr~~~-~~-~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rf-E~GT~n~~~i~~l~aal~~l~~ig~~~I 341 (805)
T PLN02724 267 PTGLGALLVRRDA-AK-L--LKKKYFGGGTVAASIADIDFVKRRERVEQRF-EDGTISFLSIAALRHGFKLLNRLTISAI 341 (805)
T ss_pred CCCceEEEEehhh-hh-h--hcCCccCCCceEEEecccceeeccccHHHHh-cCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence 9999999998642 11 1 1223333211 011 1367777888999999999887789999
Q ss_pred HHHHHHHHHHHHHHHhcCC------CeEEeeCC-------CCccEEEEEecCCCC--CCHHHHHHHHHhcCcEeeeecCC
Q 010897 344 MENCMGNARALREGLEKTG------RFEILSKD-------VGVPLVAFSLKDSSA--HTVFEISEGLRKFGWIVPAYTMP 408 (498)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~------~~~~~~~~-------~~~~~v~f~~~~~~~--~~~~~l~~~L~~~G~~v~~~~~~ 408 (498)
.++..+++++|.+.|++++ +++++.+. .+.++|+|.+.+.++ +...++...+..+||.+++.+..
T Consensus 342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~C 421 (805)
T PLN02724 342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFC 421 (805)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecccc
Confidence 9999999999999999886 47787642 257899999975432 33445655567789999876653
Q ss_pred CCC--------------------------------CCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 409 ANA--------------------------------ENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 409 ~~~--------------------------------~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
... ...+++|+|++..+|.+|+|+|++.|++.+-
T Consensus 422 a~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 422 NPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred CchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 210 0137899999999999999999999999773
No 64
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=2.2e-23 Score=214.50 Aligned_cols=367 Identities=12% Similarity=0.042 Sum_probs=241.0
Q ss_pred HHHHHHHHHHhhhccCCCC-CcccccccC-----CChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPR-LNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~-~~~~~~~~~-----~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (498)
.......+.+.+..+.++. ++|+-+.|. .+++.+.+++.++++... ..|....+..++++.+.+++.+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 4444555555444443333 566666664 456778888888887642 335555677889889888888877765
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCcccc
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVM 190 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~ 190 (498)
.+. ..+++|+|+++++.+++.++.++ ++.|+++.++|..+...++..|++++.++++ ++++.+
T Consensus 95 ~~~---~~I~it~G~~~al~~~~~~l~~~-------------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (409)
T PLN00143 95 LSP---DDVYLTLGCKHAAEIIIKVLARP-------------EANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEV 158 (409)
T ss_pred CCH---hhEEEecChHHHHHHHHHHHcCC-------------CCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcC
Confidence 432 24899999999999998887543 4789999999999999999999999999985 345889
Q ss_pred CHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-Cc-cccC-
Q 010897 191 NPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDFR- 264 (498)
Q Consensus 191 d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~-~~~~- 264 (498)
|+++|+++++++++.+++++|+||||.+.+ +++|.++|+++ +++|++|++|..+.. .... .. ..+.
T Consensus 159 d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~--~~~~~~~~~~~~~ 230 (409)
T PLN00143 159 DLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL------GILVIADEVYGHIVF--GSKPFVPMGLFAS 230 (409)
T ss_pred CHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc------CCeEEEEcccccccc--CCCCCcchhhhcc
Confidence 999999999888999999999999999976 66788888999 999999999998752 1111 00 0111
Q ss_pred CCCeeEEEEcCCcc-CCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHH
Q 010897 265 LPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGY 340 (498)
Q Consensus 265 ~~~~dsi~~s~hK~-l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~ 340 (498)
.+++ ++..|..|. ++++.++||++..++..+.+....... +........ + ...+.|.++...+. .+.+
T Consensus 231 ~~~v-i~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~-~~~~~~~~~--~----~~~~~q~a~~~~l~~~~~~~~ 302 (409)
T PLN00143 231 IVPV-ITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADS-IKKALNPAP--F----PPTFIQAAIPEILEKTTEDFF 302 (409)
T ss_pred cCcE-EEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHH-HHHHHhccC--C----CCchHHHHHHHHHhcChHHHH
Confidence 1233 444566776 899999999997554322111000000 000000000 1 12234444444443 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC--CCC-CHHHHHHH-HHhcCcEeeeecCCCCCCCeeE
Q 010897 341 KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS--SAH-TVFEISEG-LRKFGWIVPAYTMPANAENVAV 416 (498)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~l~~~-L~~~G~~v~~~~~~~~~~~~~~ 416 (498)
++..++..+.++++.+.|++++.......+.+..++.++++.. .+. +..+++.. +.++|+.+...... ...++
T Consensus 303 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f---~~~~~ 379 (409)
T PLN00143 303 SKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTV---GLKNW 379 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcccc---CCCCe
Confidence 7788888888888999998886443333343566777777521 122 45566654 47889877543221 12468
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 417 LRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 417 lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+|+++.. +.+++++-++.|+++++
T Consensus 380 iRi~~~~--~~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 380 LRITFAV--EQSSLEDGLGRLKSFCG 403 (409)
T ss_pred EEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 9999973 46666655555555554
No 65
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=220.67 Aligned_cols=334 Identities=13% Similarity=0.067 Sum_probs=229.9
Q ss_pred cCCChHH-HHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeec-ChhHHHHHHHHHHHHHHH
Q 010897 65 TTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQ 142 (498)
Q Consensus 65 ~~~~~~~-~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~sea~~la~~a~~~~~~ 142 (498)
|+.++|. +.+++...+-.+. ...+...++-+++++.+++++|.+.+. .++++. ++|+++..++..+...
T Consensus 20 p~~~~~~~v~~a~~~~~~~~~---hr~~~f~~~~~~~r~~l~~l~~~~~~~----~v~~~~gs~T~~~~~~~~~l~~~-- 90 (378)
T PRK03080 20 PCKKRPGWQLEALADALLGRS---HRQKPVKALLKRVIEGTRELLSLPEGY----EVGIVPGSDTGAWEMALWSLLGA-- 90 (378)
T ss_pred CcCCChHHHHHHHHhhhcccC---cCCHHHHHHHHHHHHHHHHHhCCCCCc----eEEEECCchHHHHHHHHHhcCCC--
Confidence 4455566 7777764432211 223466777889999999999996422 277665 8899988777665210
Q ss_pred HHHHhcCCCCCCcEEEEcCCchhH-HHH-HHHHcCC-eeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCccccc
Q 010897 143 QKRKEQGKPYDKPNIVTGANVQVC-WEK-FARYFEV-ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 143 ~~~~~~g~~~~~~~Iv~s~~~h~~-~~~-~~~~~g~-~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~ 219 (498)
++..++. ...|.+ |.. +++..|+ +++.++.+++ ...|+++++ . ++.|++++.+|.||.+.
T Consensus 91 ----------~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g-~~~d~~~i~----~-~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 91 ----------RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG-SLPDLSAVD----F-DRDVVFTWNGTTTGVRV 153 (378)
T ss_pred ----------CcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC-CCCCHhhcC----C-CCCEEEEecCCccceec
Confidence 1234444 456664 333 3467899 9999988754 568877643 2 56789999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcc
Q 010897 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~ 299 (498)
|+++|++ +++ |++++||++++.+..|+ |+. .+|++.+++|||+++|+|+|+++++++ .+...
T Consensus 154 pi~~I~~--~~~------g~~~vVDa~qs~G~~pi-------dv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~ 215 (378)
T PRK03080 154 PVARWIG--ADR------EGLTICDATSAAFALPL-------DWS--KLDVYTFSWQKVLGGEGGHGMAILSPR-AVERL 215 (378)
T ss_pred cchhhcc--ccC------CCeEEEecccccccCCC-------CHH--HCcEEEEehhhhCCCCCceEEEEECHH-HHHhh
Confidence 9999999 778 99999999998877654 222 379999999999999999999999864 22111
Q ss_pred cccc-----cCccCCC------CCCc--cccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 300 LVFH-----INYLGSD------QPTF--TLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 300 ~~~~-----~~yl~~~------~~~~--~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
.+.. +.|+.-. ...+ ...++.+...+.++..+++.+... |.+++.++..++++++.+.|+++++++
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~ 295 (378)
T PRK03080 216 ESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWAT 295 (378)
T ss_pred hcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0100 1111100 0001 111334444556667889888887 899999999999999999999998777
Q ss_pred EeeC-C-CC-ccEEEEEecCCC-CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 366 ILSK-D-VG-VPLVAFSLKDSS-AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 366 ~~~~-~-~~-~~~v~f~~~~~~-~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
++.. + .. ..+++|++++.+ ..+ .++..+|.++|+++...... ...+.+|++++..++.+++++|++.|++++
T Consensus 296 ~~~~~~~~~s~~i~~~~~~~~~~~~~-~~~~~~l~~~~i~v~~g~~~---~~~~~vRis~~~~~t~~di~~l~~al~~~~ 371 (378)
T PRK03080 296 PLVADPATRSNTSVTLDFVDAQAAVD-AAAVAKLLRENGAVDIEPYR---DAPNGLRIWCGPTVEPADVEALTPWLDWAF 371 (378)
T ss_pred cccCCccccCccEEEEEcCCchHHHH-HHHHHHHHHcCCeecccccc---CCCCcEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 7643 2 12 358889875410 123 35667777778776532211 123579999999999999999999999998
Q ss_pred HHHHc
Q 010897 442 KEIES 446 (498)
Q Consensus 442 ~~l~~ 446 (498)
+.++.
T Consensus 372 ~~~~~ 376 (378)
T PRK03080 372 ERLKA 376 (378)
T ss_pred HHHhh
Confidence 87653
No 66
>PLN00175 aminotransferase family protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=215.75 Aligned_cols=342 Identities=14% Similarity=0.094 Sum_probs=231.0
Q ss_pred CCcccccccCCC-hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
.++|..+.|..+ ++.+.+.+.+++......|....+..++++.+.+++.+.+|++.+.+ ..+++|+|+++|+.+++.
T Consensus 56 ~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~--~~I~vt~G~~~al~~~~~ 133 (413)
T PLN00175 56 AINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPE--KEVTVTSGCTEAIAATIL 133 (413)
T ss_pred eEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CCEEEeCCHHHHHHHHHH
Confidence 345555555443 56688888888776444455666788999999999998888764321 138899999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
++.++ +++|+++++.|..+...++..|++++.|+++++++.+|+++|++++.+++++|++++|+|||
T Consensus 134 ~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPt 200 (413)
T PLN00175 134 GLINP-------------GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPT 200 (413)
T ss_pred HhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCC
Confidence 76432 47899999999999999999999999999975458899999999998889999999999999
Q ss_pred cccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccCC-CCCCeEEE
Q 010897 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGVGWV 288 (498)
Q Consensus 216 G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~ 288 (498)
|.+. .+++|.++|+++ +++|++|++|..+.. ..... ..+ ....-.++..|..|.+. ++.++||+
T Consensus 201 G~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~l~~---~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~ 271 (413)
T PLN00175 201 GKMFTREELELIASLCKEN------DVLAFTDEVYDKLAF---EGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWA 271 (413)
T ss_pred CcCCCHHHHHHHHHHHHHc------CcEEEEecccCcccc---CCcccChhhCCCCcCcEEEEecchhhccCcchheeee
Confidence 9995 477789999999 999999999988752 11110 111 11122345567778664 78899999
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEI 366 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 366 (498)
+... +.+ ..+.....+. . .+ ...+.|+++...+ +...+++..++..++++.+.+.|++.+ +.+
T Consensus 272 v~~~-~l~-~~l~~~~~~~-----~----~~---~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 336 (413)
T PLN00175 272 IAPP-HLT-WGVRQAHSFL-----T----FA---TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKV 336 (413)
T ss_pred EeCH-HHH-HHHHHHHhhc-----c----CC---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-Cee
Confidence 8543 221 1111100111 0 11 1223455555554 233457777788889999999999985 776
Q ss_pred eeCCCCccEEEEEecCCCCC-CHHHHHHHHH-hcCcEeeeec-CCC-CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 367 LSKDVGVPLVAFSLKDSSAH-TVFEISEGLR-KFGWIVPAYT-MPA-NAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~-~~~~l~~~L~-~~G~~v~~~~-~~~-~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
..+. +..++.+++.+. +. +..++++.|. ++|+.+.... +.. ...+..++|+++.. +.++++..++.|++++
T Consensus 337 ~~p~-g~~f~~~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 337 YPSS-GTYFVMVDHTPF-GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKL 411 (413)
T ss_pred cCCC-eeEEEEEecccc-CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 6442 334455565321 23 5678999886 5698764322 211 11234689999973 5666665555555544
No 67
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=214.23 Aligned_cols=334 Identities=13% Similarity=0.056 Sum_probs=227.7
Q ss_pred CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+.+.++++.. ...|....+..++++.+.+++++.+|.+.+.. ..+++|+|+++++.+++.++.++
T Consensus 53 ~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~--~~I~it~Ga~~al~~~~~~l~~~----- 125 (405)
T PRK06207 53 EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAA--DELIITPGTQGALFLAVAATVAR----- 125 (405)
T ss_pred CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CCEEEeCCcHHHHHHHHHHhcCC-----
Confidence 35567777777777553 33455566788999999999999999764320 23899999999999888877542
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec----CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC-
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE----EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED- 220 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~----~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~- 220 (498)
+++|++++++|..+...++.+|++++.|+++ ++++.+|+++|++++++++++|++++|+||||.+.+
T Consensus 126 --------Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~ 197 (405)
T PRK06207 126 --------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSA 197 (405)
T ss_pred --------CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCH
Confidence 5799999999999999999999999999986 224789999999999888999999999999999976
Q ss_pred --HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC----ccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCC
Q 010897 221 --VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL----EWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (498)
Q Consensus 221 --l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~----~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~ 293 (498)
+++|.++|+++ +++|++|++|+.+.. ..... .++...+++ ++..|..|.+. ++.++||++.. +
T Consensus 198 e~l~~l~~~a~~~------~~~iI~De~Y~~~~~--~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~lpGlRiG~ii~~-~ 267 (405)
T PRK06207 198 EEIAQIAALARRY------GATVIVDQLYSRLLY--DGTSYTHLRALPIDPENV-ITIMGPSKTESLSGYRLGVAFGS-P 267 (405)
T ss_pred HHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCchhcCCCCcCcE-EEEecchhhccCcccceEEEEcC-H
Confidence 67788889999 999999999998752 11110 111112233 45556777664 78889999743 2
Q ss_pred CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC
Q 010897 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (498)
Q Consensus 294 ~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (498)
+.+ ..+.....+. .+ .. ..+.|.++...+. ...+.+.++...++++.+.+.|++++++.+..+.
T Consensus 268 ~l~-~~~~~~~~~~-------~~--~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~- 333 (405)
T PRK06207 268 AII-DRMEKLQAIV-------SL--RA---AGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQ- 333 (405)
T ss_pred HHH-HHHHHHHhHh-------cc--CC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC-
Confidence 221 2111111111 00 01 1123444444442 2335677778888889999999988667765432
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 372 GVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
...++.+++++. ..+..+++++|. ++|+.+.....-. ....+++|+++.. +.++++.-++.|.++++.
T Consensus 334 gg~fl~~~l~~~-~~~~~~~~~~l~~~~gV~v~pG~~F~-~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 334 AGSYLFPRLPRL-AVSLHDFVKILRLQAGVIVTPGTEFS-PHTADSIRLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred eeEEEEEeCccc-CCCHHHHHHHHHHhcCEEEeCchHhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 456666677431 246778999997 6798875432111 1234689999974 456666555555555543
No 68
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.9e-24 Score=216.85 Aligned_cols=330 Identities=14% Similarity=0.115 Sum_probs=225.0
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
+++.+.+.+.+++......|...++..++++.+.+++.+.+|.+.+. ..+++|+|+++++.+++.++..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~l~~~------- 116 (391)
T PRK08361 47 TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV---DNVIVTAGAYEATYLAFESLLEE------- 116 (391)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ccEEEeCChHHHHHHHHHHhcCC-------
Confidence 35678888887776654455555678899999888888877765332 23899999999998888776432
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC-ccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHH
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~ 223 (498)
++.|++++++|..+...++..|++++.+|++++ ++.+|++++++.+++++++|++++|+||||.+.| +++
T Consensus 117 ------g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~ 190 (391)
T PRK08361 117 ------GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKA 190 (391)
T ss_pred ------CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHH
Confidence 468999999999999999999999999999743 4789999999999989999999999999999988 888
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccc
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~ 301 (498)
|.++|+++ ++++++|++|+.+.. .......... ....+.+..+.+|.++ ++.++||++..+ +.+ +.+.
T Consensus 191 l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~-~~~~ 260 (391)
T PRK08361 191 IADIAEDY------NIYILSDEPYEHFLY--EGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVI-KDMI 260 (391)
T ss_pred HHHHHHHc------CeEEEEEccccccee--CCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHH-HHHH
Confidence 99999999 999999999998752 1111111111 1224677789999764 555689998643 222 1111
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
....+.. ++ ...+.|.++...+.. +..++..+...++++.+.+.|++++++.+..+ ..++++
T Consensus 261 ~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p--~g~~~~ 326 (391)
T PRK08361 261 KLHAYII---------GN---VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP--KGAFYV 326 (391)
T ss_pred HHHhhhc---------cC---CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC--CEEEEE
Confidence 0001110 01 122345554444432 23566667777888889999999877776544 345444
Q ss_pred -EEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 378 -FSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 378 -f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.++++ .+.+..++++.|. ++|+.+.....- ...+..++|++++. +.++++..++.|++++
T Consensus 327 ~~~l~~-~~~~~~~l~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l 388 (391)
T PRK08361 327 FANIDE-TGMSSEDFAEWLLEKARVVVIPGTAF-GKAGEGYIRISYAT--SKEKLIEAMERMEKAL 388 (391)
T ss_pred EEECCC-CCCCHHHHHHHHHHhCCEEEcCchhh-CCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 46642 2467788998886 579887543211 12234789999974 4455554444444444
No 69
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=2.8e-23 Score=213.28 Aligned_cols=352 Identities=13% Similarity=0.058 Sum_probs=232.6
Q ss_pred cCCCCCcccccccC----CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~~----~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
.+.+.++|..+.|. ++++.+.+++.+.+......|...++..++++.+.+++.+.+|+..+. ..+++|+|+++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~ 104 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP---DDVRVTAAVTE 104 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHH
Confidence 34455666666652 356778888887775433335455677888888888887777765432 23899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEE-EecCCccccCHHHHHHHhhhCCeEEE
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVA 207 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~L~~~i~~~t~~v~ 207 (498)
|+.+++.++.++ ++.|++++++|..+...++.+|+.++.+ +.+++++.+|++.+++.+.+++++|+
T Consensus 105 al~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 171 (398)
T PRK08363 105 ALQLIFGALLDP-------------GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIA 171 (398)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEE
Confidence 999888776432 4789999999999999999999998888 55555678999999999988899999
Q ss_pred EeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-ccc-CCCCeeEEEEcCCcc-CCC
Q 010897 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKY-GLV 281 (498)
Q Consensus 208 ~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~-~~~~~dsi~~s~hK~-l~~ 281 (498)
+++|+||||.+.+ +++|.++|+++ ++++++|++|+.+.. ..+... ..+ ...+ ..+..|.+|. +.+
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~li~Deay~~~~~--~~~~~~~~~~~~~~~-vi~~~SfSK~~~~~ 242 (398)
T PRK08363 172 VINPNNPTGALYEKKTLKEILDIAGEH------DLPVISDEIYDLMTY--EGKHVSPGSLTKDVP-VIVMNGLSKVYFAT 242 (398)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CeEEEEhhhhhhhcc--CCcccCHHHcCcCCc-EEEEecchhccCCc
Confidence 9999999999876 88899999999 999999999998642 111000 111 1112 3345688887 788
Q ss_pred CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHh
Q 010897 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLE 359 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~ 359 (498)
+.++||++..++..+...+......... ..+ + ...+.|.++...+ ..+.+++..++..++++++.+.|+
T Consensus 243 GlRiG~~~~~~~~~~~~~l~~~~~~~~~----~~~--~---~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~ 313 (398)
T PRK08363 243 GWRLGYIYFVDPEGKLAEVREAIDKLAR----IRL--C---PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLN 313 (398)
T ss_pred cceEEEEEEeCcHHHHHHHHHHHHHHhc----ccc--c---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999974322111111100000000 001 0 1222333333333 234566777778888999999999
Q ss_pred cCCCeEEeeCCCCccEEEE-EecCCCCCCHHHHH-HHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 360 KTGRFEILSKDVGVPLVAF-SLKDSSAHTVFEIS-EGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~-~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+++++.+..+ ..+++.| ++++....+..+++ +.|.++|+.+.....-. ..+.+++|+++.. +.+++++.++.|
T Consensus 314 ~~~~~~~~~p--~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~~--~~~~l~~~l~~l 388 (398)
T PRK08363 314 EIPGISTTKP--QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFG-EYGAGHFRLVFLP--PVEILEEAMDRF 388 (398)
T ss_pred cCCCCEecCC--CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 9876776533 4677766 66431112344554 55688998874332111 1335689999863 567777666666
Q ss_pred HHHHHH
Q 010897 438 EEVLKE 443 (498)
Q Consensus 438 ~~~l~~ 443 (498)
+++++.
T Consensus 389 ~~~~~~ 394 (398)
T PRK08363 389 EEFMRE 394 (398)
T ss_pred HHHHHH
Confidence 666543
No 70
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2e-23 Score=214.39 Aligned_cols=346 Identities=13% Similarity=0.070 Sum_probs=235.0
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCC-CCCCCCcceeeecChhHHH
Q 010897 54 GNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (498)
Q Consensus 54 ~~p~~~~~~~~~~~-~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~sea~ 130 (498)
+++.++|....+.. +++.+.+.+.+.+... ...|.. .+...+++.+.+++.+.+|++ .+.. ..+++|+|+++++
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~--~~I~it~Gs~~al 119 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPV--TEVIHSIGSKPAL 119 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCc--ceEEEccCHHHHH
Confidence 33345556555543 4566777776655432 222333 678889999999988877865 3221 1389999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEe
Q 010897 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (498)
Q Consensus 131 ~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~ 209 (498)
.+++.++.++ ++.|+++.++|..+...++..|++++.+|+++ +++.+|++++++.+.+++++|+++
T Consensus 120 ~~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 186 (410)
T PRK06290 120 AMLPSCFINP-------------GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLN 186 (410)
T ss_pred HHHHHHhCCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEE
Confidence 8888776442 47899999999999999999999999999974 357889999999998889999999
Q ss_pred eccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-ccc-CCCCeeEEEEcCCccC-CCCC
Q 010897 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYG-LVYA 283 (498)
Q Consensus 210 ~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~-~~~~~dsi~~s~hK~l-~~p~ 283 (498)
+|+||||.+.+ +++|.++|+++ +++|++|++|+.+.. ...... ..+ .....+++.-|..|.+ +++.
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~------~~~iI~DEaY~~~~~--~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl 258 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKEN------NIIVVQDAAYAALTF--DGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW 258 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEecchhhcee--CCCCcChhcCCCccccEEEEeechhhcCCchh
Confidence 99999999977 56777888999 999999999998642 111000 011 1223456677888876 6888
Q ss_pred CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q 010897 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTG 362 (498)
Q Consensus 284 g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~ 362 (498)
++||++.. ++.+ ..+.....+. .. ....+.|.++...+.... .++..++..++++++.+.|++.+
T Consensus 259 RiG~ii~~-~~l~-~~l~~~~~~~-------~~-----~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 324 (410)
T PRK06290 259 RLAFVVGN-ELIV-KAFATVKDNN-------DS-----GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG 324 (410)
T ss_pred heEeEEeC-HHHH-HHHHHHHhcc-------cc-----CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999843 2221 1111000000 00 011234444444443322 45567777788999999999985
Q ss_pred CeEEeeCCCCccEEEE-EecCCC-----CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC-CCCHHHHHHHHH
Q 010897 363 RFEILSKDVGVPLVAF-SLKDSS-----AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE-DFSRSLVERLIS 435 (498)
Q Consensus 363 ~~~~~~~~~~~~~v~f-~~~~~~-----~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~-~~t~~~~~~l~~ 435 (498)
+.+..+ ..+++.| ++++.. ..+..+++++|.++|+++.. |.... ..++|++++. ..++++++++++
T Consensus 325 -~~~~~p--~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~---p~~~~-~~~lRi~~~~~~~~~~~~~~~~~ 397 (410)
T PRK06290 325 -FKAEMP--GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTV---PWDDA-GHFLRFSVTFEAKDEEEEDRILE 397 (410)
T ss_pred -CeecCC--CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEE---CCccc-cCeEEEEEEcccccccchhHHHH
Confidence 776543 4566655 665321 13678999999999866532 22111 2579999974 457889999999
Q ss_pred HHHHHHHHH
Q 010897 436 HIEEVLKEI 444 (498)
Q Consensus 436 ~l~~~l~~l 444 (498)
+|++.+..+
T Consensus 398 ~l~~~~~~~ 406 (410)
T PRK06290 398 EIKRRLSDV 406 (410)
T ss_pred HHHHHHhhc
Confidence 999988764
No 71
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=1.1e-23 Score=212.45 Aligned_cols=325 Identities=18% Similarity=0.101 Sum_probs=219.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcC---CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
..+|++.+++.+++.+....+.. ..+.....+++++.+++++|.+. .+++++|++++..++.++..+
T Consensus 15 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-------~iv~~sg~~a~~~~~~~~~~~--- 84 (349)
T cd06454 15 ANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA-------ALVFSSGYAANDGVLSTLAGK--- 84 (349)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC-------EEEeccHHHHHHHHHHHhcCC---
Confidence 33588999999888753222122 22456666788888999999853 566777788888777665322
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-----CCeEEEEeeccCCcccc
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF 218 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~ 218 (498)
+++|+++++.|.++...++..|++++.++. +|++.+++++++ ++++|++++++|+||..
T Consensus 85 ----------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 85 ----------GDLIISDSLNHASIIDGIRLSGAKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred ----------CCEEEEehhhhHHHHHHHHHcCCceEEecC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCc
Confidence 468999999999999999999999887752 577888888874 46778888999999999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-ccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
.|+++|.++|+++ ++++++|++|+.+..+...... ..+......|++..++||+++. .| |+++.+ ++.+
T Consensus 149 ~~~~~i~~~~~~~------~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~-~~~~- 218 (349)
T cd06454 149 APLPELVDLAKKY------GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS-KELI- 218 (349)
T ss_pred cCHHHHHHHHHHc------CCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC-HHHH-
Confidence 9999999999999 9999999999754321111000 1122233578999999998865 44 666643 2221
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
+.+... ...+...++.....+.+..++++.+.. +....++..++++++.+.|++++ ++++.++ ...+.+
T Consensus 219 ~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~-~~~~~~ 287 (349)
T cd06454 219 DYLRSY-------ARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSP-SHIIPP 287 (349)
T ss_pred HHHHHh-------chhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCC-CCcEEE
Confidence 111100 011111123333445556666655533 45677888899999999999885 7766543 333444
Q ss_pred EEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 378 FSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+..++ ..+..++.+.|.++|+.+.....+....+..++|+++...++.++++++++.|+++
T Consensus 288 ~~~~~--~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 288 LIGDD--PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EeCCC--hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44421 23567899999999998764322211123468999998888999999888888753
No 72
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.6e-23 Score=211.87 Aligned_cols=315 Identities=11% Similarity=0.078 Sum_probs=215.8
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.+..... |.. +.. .++++++++++|++++ .+++|+|+++++.+++.++ .+
T Consensus 33 ~~p~~~~~a~~~~~~~~~~-y~~-~~~----~~lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~~~~l-~~------ 94 (356)
T PRK08056 33 GMPVSLKRAIIDNLDCAER-YPD-VEY----RHLHQALARHHQVPAS-----WILAGNGETESIFAVVSGL-KP------ 94 (356)
T ss_pred CCCHHHHHHHHHHHHhccc-CcC-ccH----HHHHHHHHHHhCcChh-----hEEECCCHHHHHHHHHHHh-CC------
Confidence 5667788888776553222 211 222 3666778888888753 3899999999998777664 21
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VK 222 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~ 222 (498)
+ .+++..+++..+...++..|++++.+|+++ +++.+| +++.+.+.+++++|++++|+||||.+.+ ++
T Consensus 95 -------g-~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~ 165 (356)
T PRK08056 95 -------R-RAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQ 165 (356)
T ss_pred -------C-CEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHH
Confidence 2 366677899999999999999999999863 345666 4555667788999999999999999988 77
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~ 301 (498)
+|+++|+++ +++|++|++|..+.. ........+....-+.+..|.+|++. ++.++||++..+++.+ ..+.
T Consensus 166 ~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~-~~l~ 236 (356)
T PRK08056 166 AIAERCKSL------NIALILDEAFIDFIP--DETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAV-ARMR 236 (356)
T ss_pred HHHHHHHhc------CCEEEEecchhccCC--cchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHH-HHHH
Confidence 889999999 999999999988642 11100001111124567789999887 8899999986543221 1111
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEe
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSL 380 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (498)
.+. .. . ....+++.++...+.... .++..+...+.++++.+.|++++++.+..+ ..+++.+++
T Consensus 237 ---~~~----~~----~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~~~~~~~~ 300 (356)
T PRK08056 237 ---RQQ----MP----W---SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG--RANYLFLRC 300 (356)
T ss_pred ---HhC----CC----C---chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--CCcEEEEEc
Confidence 000 01 1 123345666655554333 345567777889999999999877776533 567777666
Q ss_pred cCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 381 KDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 381 ~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+. +..++++.|.++|+.+....... ....+++||+++ +.+++++|++.|++++
T Consensus 301 ~~----~~~~~~~~l~~~gI~v~~~~~f~-~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 301 ER----PDIDLQRALLTQRILIRSCANYP-GLDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CC----ChHHHHHHHHHCCeEEEECCCCC-CCCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 42 34689999999999876543221 233468999998 7789999999998764
No 73
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.7e-23 Score=212.17 Aligned_cols=330 Identities=17% Similarity=0.113 Sum_probs=220.8
Q ss_pred CChHHHHHHHHHHhccCCC-CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+++.+.++.... .|....+.. ++++++++++|.+++ .+++|+|+++++.+++.++..+
T Consensus 41 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~~-----~v~~~~g~t~al~~~~~~~~~~----- 106 (380)
T PRK06225 41 GPHEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDDD-----EALITAGATESLYLVMRAFLSP----- 106 (380)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCCC-----cEEEeCCHHHHHHHHHHHhcCC-----
Confidence 4567888888888775322 222222323 455668888898653 3999999999999888876432
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec--CCccccCHHHHHHHhhhCCeEEEEeeccCCccccc---C
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE---D 220 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~--~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~---~ 220 (498)
++.|++++++|..+..+++..|++++.++++ ++++.+|++++++.+++++++|++++|+||||.+. +
T Consensus 107 --------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~ 178 (380)
T PRK06225 107 --------GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEE 178 (380)
T ss_pred --------CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHH
Confidence 3689999999999989999999999999974 23478999999999998999999999999999974 5
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcc
Q 010897 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~ 299 (498)
+++|.++|+++ |+++++|++|+.+..+. +. ...+. +....+..+.+|+++ ++.++||++.++ +.+ +.
T Consensus 179 ~~~i~~~a~~~------~~~ii~De~y~~~~~~~--~~-~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~-~~ 246 (380)
T PRK06225 179 IKEFAEIARDN------DAFLLHDCTYRDFAREH--TL-AAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP-DLI-EV 246 (380)
T ss_pred HHHHHHHHHHC------CcEEEEehhHHHHhccC--Cc-hhhcC-CCCEEEEeechhhcCCccceeEEEecCH-HHH-HH
Confidence 88899999999 99999999998764211 10 01111 123445557789884 456689998643 222 22
Q ss_pred cccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 300 ~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
+.. +.. ..+ + ...+.+.++...+. .+-+++..+...++++.+.+.|++++++.+...+...+++.
T Consensus 247 ~~~---~~~---~~~---~----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 313 (380)
T PRK06225 247 VKS---IVI---NDL---G----TNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMV 313 (380)
T ss_pred HHH---HHh---ccc---C----CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEE
Confidence 111 100 011 1 12223333333321 22233334445566777888898876554322223456777
Q ss_pred EEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 378 FSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
+.+++ .+.+..+++++|.++|+.++.........+..++|+++.. +.++++++++.|+++++.+++
T Consensus 314 ~~~~~-~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 314 IDISE-AGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred EEccc-ccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHHHHHHhhc
Confidence 76643 2367889999999999887543211112345689999863 689999999999999987764
No 74
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=4.1e-23 Score=218.47 Aligned_cols=336 Identities=12% Similarity=0.042 Sum_probs=218.9
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
+++.+.+.+.+++... ..|....+..++++.+.+++.+..+...+. ..+++|+|+++++.+++.++.++
T Consensus 163 ~p~~~~~~~~~~~~~~-~~Y~~~~G~~~lReaia~~~~~~~~~~~~~---~~I~it~G~~eal~~~~~~l~~~------- 231 (517)
T PRK13355 163 TPDEVVYDMAQQLTDT-EGYSDSKGLFSARKAIMQYAQLKGLPNVDV---DDIYTGNGVSELINLSMSALLDD------- 231 (517)
T ss_pred CCHHHHHHHHHHhhcC-CCCCCCcChHHHHHHHHHHHHhcCCCCCCh---hHEEEeCcHHHHHHHHHHHhCCC-------
Confidence 3566777777776543 345555677888888888776544322221 23999999999999988877542
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHH
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~ 223 (498)
+++|++++++|..|...++..|++++.+++++ ++|.+|+++|+++++++|++|++++|+||||.+.+ +++
T Consensus 232 ------Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~ 305 (517)
T PRK13355 232 ------GDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQ 305 (517)
T ss_pred ------CCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHH
Confidence 57999999999999999999999999999874 35899999999999999999999999999999977 788
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEE-EcCCcc-CCCCCCeEEEEEeCCCCCCccc
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSIN-VSGHKY-GLVYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~-~s~hK~-l~~p~g~g~~~~~~~~~l~~~~ 300 (498)
|.++|+++ +++|++|++|..+.. .......... .++..+++ .+..|. ++++.++||++...+..+...+
T Consensus 306 i~~~a~~~------~~~ii~DE~Y~~~~~--~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~ 377 (517)
T PRK13355 306 IVDIAREH------QLIIFSDEIYDRLVM--DGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDY 377 (517)
T ss_pred HHHHHHHc------CcEEEEehhhhhhcC--CCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHH
Confidence 89999999 999999999998752 1111100001 12333333 355775 6889999999875322110100
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEE
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV 376 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (498)
......+.. .+.....++|+++...+.. ..+....++..+.++++.+.|++++++++..+ ..+++
T Consensus 378 ~~~l~~~~~---------~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p--~g~fy 446 (517)
T PRK13355 378 IEGLNMLAN---------MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKP--KAAFY 446 (517)
T ss_pred HHHHHHHhc---------CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCC--CeeeE
Confidence 000000000 0001233456666655532 12222234455678889999999877876644 56777
Q ss_pred EE-EecCCC--CCCHHHHH-HHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 377 AF-SLKDSS--AHTVFEIS-EGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 377 ~f-~~~~~~--~~~~~~l~-~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+| +++... ..+..+++ +.|.++|+.+...... .....+++|+++. .+.++++..++.|.++++
T Consensus 447 ~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F-~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 447 IFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGF-NWDKPDHFRVVYL--PRLEDLEDAMDRLADFFS 513 (517)
T ss_pred EEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchh-CCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 76 664210 12334444 5677889877543221 1124568999985 356666655555655554
No 75
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.9e-23 Score=213.14 Aligned_cols=330 Identities=12% Similarity=0.084 Sum_probs=227.1
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
++.+.+.+.+.+......|...++..++++++.+++.+.+|.+.+.. ..+++|+|+++|+.+++.++.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~~~l~~~-------- 104 (378)
T PRK07682 35 PWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPN--DEIIVTVGASQALDVAMRAIINP-------- 104 (378)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHHHhCCC--------
Confidence 45567777777665444455567888999999999998888754321 13899999999998888776432
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLL 224 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I 224 (498)
++.|++++++|..+...++.+|.+++.++++. +++.+|+++|++++.+++++|++++|+||||.+.+ +++|
T Consensus 105 -----gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 105 -----GDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred -----CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHH
Confidence 46899999999999999999999999999863 34789999999999888999999999999999854 8889
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~ 300 (498)
.++|+++ ++++++|++|+.+.. .+... ..+ ....-.++..+..|.++ ++.++||++... +.+ +.+
T Consensus 180 ~~~~~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i-~~l 248 (378)
T PRK07682 180 AVIVEKH------DLIVLSDEIYAELTY---DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-YFS-EAM 248 (378)
T ss_pred HHHHHHc------CcEEEEehhhhhccc---CCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-HHH-HHH
Confidence 9999999 999999999998752 11110 001 11122456667788775 677899998643 221 211
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
.....+.. .+ ...+.|.++...+ +....++..++..++++++.+.|++++ +++..+ ..+++.|
T Consensus 249 ~~~~~~~~---------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p--~g~~~~~ 313 (378)
T PRK07682 249 LKIHQYSM---------MC---APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-LTCHVP--GGAFYAF 313 (378)
T ss_pred HHHHHhhc---------cC---CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC--CeeEEEE
Confidence 11000100 01 1233455555555 233456677778889999999999985 765443 3455555
Q ss_pred -EecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 379 -SLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 379 -~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.+++ .+.+..++++.|. ++|+.+...... ...+..++|++++. +.+++++.++.|+++++.
T Consensus 314 ~~~~~-~~~~~~~~~~~ll~~~gv~v~pg~~f-~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 314 PSISS-TGLSSEEFAEQLLLEEKVAVVPGSVF-GESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred EeccC-CCCCHHHHHHHHHHhCCEEEcCchhh-CcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 4422 2357788998876 689887543211 12235789999974 567887777777776643
No 76
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=2.9e-23 Score=212.38 Aligned_cols=338 Identities=15% Similarity=0.073 Sum_probs=222.4
Q ss_pred CcccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++....+. ++++.+.+++.+.+..+...|....+..++++.+.+++.+.+|++.+. ..+++|+|+++++.+++.+
T Consensus 35 i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~al~~~~~~ 111 (387)
T PRK08960 35 IHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP---ERILVTPGGSGALLLASSL 111 (387)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccCcHHHHHHHHHH
Confidence 455555555 356778888888876544445556677889888888888877765432 2389999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC-ccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
+..+ +++|++++++|..+...++..|.+++.++++++ +|.+|++++++++++++++|++++|+|||
T Consensus 112 ~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPt 178 (387)
T PRK08960 112 LVDP-------------GKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPT 178 (387)
T ss_pred hcCC-------------CCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCC
Confidence 6432 478999999999999999999999999999743 57899999999999889999999999999
Q ss_pred ccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEe
Q 010897 216 GEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWR 291 (498)
Q Consensus 216 G~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~ 291 (498)
|...+. ++|+++|+++ ++++++|++|..+.. ............-..+..|.+|.+ .++.++||++..
T Consensus 179 G~~~~~~~~~~l~~~~~~~------~~~li~De~Y~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~ 249 (387)
T PRK08960 179 GTLLSRDELAALSQALRAR------GGHLVVDEIYHGLTY---GVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAP 249 (387)
T ss_pred CcCcCHHHHHHHHHHHHHc------CCEEEEEcccccccc---CCCCCChhhccCCEEEEeecccccCCcccEEEEEEcC
Confidence 999765 5567778899 999999999988642 111111112222234556888876 577889999864
Q ss_pred CCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 292 ~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
+ +.+ ..+.. +.. .+.+ . ...+.|.++...+. .....+..+...+.++.+.+.|++.+ +.+..
T Consensus 250 ~-~~~-~~~~~---~~~----~~~~--~---~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~~~ 314 (387)
T PRK08960 250 P-AAV-PELEK---LAQ----NLYI--S---ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-FGIAV 314 (387)
T ss_pred H-HHH-HHHHH---HHh----hhcc--C---CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCCc
Confidence 3 221 11110 000 0011 0 12233444444442 23344555666778888999998875 55432
Q ss_pred CCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 369 KDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+.+..++.+++++ ...+..+++++|. ++|+.+.............++|+++.. +. +++.++++.+.
T Consensus 315 ~p~g~~f~~~~~~~-~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~---~~l~~al~~l~ 382 (387)
T PRK08960 315 EPQGAFYLYADISA-FGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SL---PRLQEAVERIA 382 (387)
T ss_pred CCCeeEEEEEeccc-cCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CH---HHHHHHHHHHH
Confidence 33344555556642 1246678988865 679887533211111234589999974 33 34445554443
No 77
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6e-23 Score=210.61 Aligned_cols=342 Identities=13% Similarity=0.069 Sum_probs=230.7
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++....+.. +++.+.+++.+.+......|....+...+++.+.+++.+.+|...+. ..+++|+|+++|+.+++.+
T Consensus 34 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~~~g~~~a~~~~~~~ 110 (393)
T PRK05764 34 ISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP---SQVIVTTGAKQALYNAFMA 110 (393)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH---HHEEEeCCcHHHHHHHHHH
Confidence 4445444443 35678888887776544445555677888888888887777754322 2389999999999888777
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
+.++ +++|+++++.|..+..+++..|++++.+++++ +++.+|++++++++++++++|++++|+|||
T Consensus 111 ~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPt 177 (393)
T PRK05764 111 LLDP-------------GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPT 177 (393)
T ss_pred hcCC-------------CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCC
Confidence 6432 46899999999999999999999999999973 457899999999998889999999999999
Q ss_pred cccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC---Cc-cccCCCCeeEEEEcCCccCC-CCCCeEE
Q 010897 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD---LE-WDFRLPLVKSINVSGHKYGL-VYAGVGW 287 (498)
Q Consensus 216 G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~---~~-~~~~~~~~dsi~~s~hK~l~-~p~g~g~ 287 (498)
|.+. ++++|.++|+++ ++++++|++|+.+.. .... .. ........+.+..+..|.++ .+.++||
T Consensus 178 G~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ 249 (393)
T PRK05764 178 GAVYSPEELEAIADVAVEH------DIWVLSDEIYEKLVY--DGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGY 249 (393)
T ss_pred CcccCHHHHHHHHHHHHHC------CcEEEEeccccceee--CCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEE
Confidence 9985 478899999999 999999999987652 1111 10 00112234566677889875 5567899
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
++.+ ++.. ..+.. +.. .. +. ....+.|+++...+. .+.+.+..++..++++.+.+.|++++++.
T Consensus 250 i~~~-~~~~-~~~~~---~~~----~~---~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 315 (393)
T PRK05764 250 AAGP-KELI-KAMSK---LQS----HS---TS--NPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLE 315 (393)
T ss_pred EecC-HHHH-HHHHH---HHh----hc---cc--CCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 8843 2221 11110 000 00 00 012344555555553 34455666777778899999999986687
Q ss_pred EeeCCCCccEEEEEecCC---CCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 366 ILSKDVGVPLVAFSLKDS---SAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~---~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+..+. +..++.+.+++. .+.+..++.+.|. ++|+.+....... ..+++|+++.. +.+++++.++.|.+++
T Consensus 316 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~vRis~~~--~~~~~~~~i~~l~~~~ 389 (393)
T PRK05764 316 CPKPE-GAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG---APGYVRLSYAT--SLEDLEEGLERIERFL 389 (393)
T ss_pred ccCCC-cceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC---CCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 76432 333444466431 1123478888875 5798875432111 14689999864 6888888888888777
Q ss_pred HH
Q 010897 442 KE 443 (498)
Q Consensus 442 ~~ 443 (498)
++
T Consensus 390 ~~ 391 (393)
T PRK05764 390 ES 391 (393)
T ss_pred Hh
Confidence 64
No 78
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=5.1e-23 Score=210.60 Aligned_cols=342 Identities=14% Similarity=0.063 Sum_probs=227.4
Q ss_pred CcccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
++|..+.+. ++++.+.+++.+.+... ...|....+...+++.+++++++.+|.+.+.. ..+++|+|+++++.+++.
T Consensus 30 ~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~--~~i~~t~G~~~~l~~~~~ 107 (389)
T PRK05957 30 ISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNE--QAIVVTAGSNMAFMNAIL 107 (389)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEEeCChHHHHHHHHH
Confidence 444544443 35667888887776532 23455566788899999999999999753211 238899999999987777
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
++..+ +++|+++++.|..+...++..|++++.++++++ +.+|++++++++++++++|++++++|||
T Consensus 108 ~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~klv~~~~p~NPt 173 (389)
T PRK05957 108 AITDP-------------GDEIILNTPYYFNHEMAITMAGCQPILVPTDDN-YQLQPEAIEQAITPKTRAIVTISPNNPT 173 (389)
T ss_pred HhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCC-CCcCHHHHHHhcCcCceEEEEeCCCCCC
Confidence 66332 478999999998888888899999999998754 7899999999999899999999999999
Q ss_pred ccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-Cc-ccc-CCCCeeEEEEcCCccC-CCCCCeEEE
Q 010897 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDF-RLPLVKSINVSGHKYG-LVYAGVGWV 288 (498)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~-~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~ 288 (498)
|.+.| +++|.++|+++ |+++++|++|+.+.. .... .. ..+ ....-.++..+..|.+ .++.++||+
T Consensus 174 G~~~~~~~~~~i~~~a~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 245 (389)
T PRK05957 174 GVVYPEALLRAVNQICAEH------GIYHISDEAYEYFTY--DGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYM 245 (389)
T ss_pred CcCcCHHHHHHHHHHHHHc------CcEEEEeccchhccC--CCCCccChhhCCCccCcEEEEecchhhccCccceeEEE
Confidence 99987 88899999999 999999999998752 1111 11 011 1111234445666866 467789999
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCe-E
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRF-E 365 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~ 365 (498)
+..+ +.+ +.+.....+.. .. ...+.|.++...+. .+.+++..+...++++.+.+.|++++++ .
T Consensus 246 ~~~~-~~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 311 (389)
T PRK05957 246 VIPI-HLL-EAIKKIQDTIL---------IC---PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCT 311 (389)
T ss_pred ecCH-HHH-HHHHHHHhhcc---------cC---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 8643 221 11111100000 01 12234555555552 3345777778888999999999988764 4
Q ss_pred EeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+. ++.+..++.++++. .++..+++++|. ++|+.+...... ...+.+++|++++. .+.+++++.++.|.+.++
T Consensus 312 ~~-~~~gg~~~~~~~~~--~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 312 LH-PANGAFYCFLKVNT--DLNDFELVKQLIREYRVAVIPGTTF-GMKNGCYLRIAYGA-LQKATAKEGIERLVQGLK 384 (389)
T ss_pred cc-CCCeeEEEEEeCCC--CCChHHHHHHHHHHCCEEEccchhh-CCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 33 33233344456643 467889999987 589887543211 11224689999963 245555555555554443
No 79
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=7.2e-24 Score=214.68 Aligned_cols=311 Identities=18% Similarity=0.166 Sum_probs=217.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.+.....++ ..+..+ +++.+++++|++++ .+++|+|+++++.+++.++.++
T Consensus 42 ~~~~~v~~a~~~~~~~~~~Yp--~~g~~~----Lr~aia~~~~~~~~-----~I~vt~Gs~e~i~~~~~~l~~~------ 104 (366)
T PRK01533 42 GCSPRVLDELQKSWLDHALYP--DGGATT----LRQTIANKLHVKME-----QVLCGSGLDEVIQIISRAVLKA------ 104 (366)
T ss_pred CCCHHHHHHHHHHHHhcCcCC--CCCHHH----HHHHHHHHhCCCcc-----eEEECCCHHHHHHHHHHHhcCC------
Confidence 567788888877665432222 223333 55557777888753 3999999999999888887442
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
++.|++++++|..+...++..|++++.||+++ +.+|+++|++++++++++|++++|+||||.+.+.+++.+
T Consensus 105 -------gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~ 175 (366)
T PRK01533 105 -------GDNIVTAGATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQ 175 (366)
T ss_pred -------CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHH
Confidence 46899999999999999999999999999864 469999999999888999999999999999999888888
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
+++...+ +.++++|++|..+...-..+.....+ ..+++ ++.-|..|.+ +++.++||++.. ++.+ +.+..
T Consensus 176 l~~~~~~----~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~v-i~~~SfSK~~~l~GlRiG~~i~~-~~~~-~~l~~-- 246 (366)
T PRK01533 176 FIEGISE----NTLIVIDEAYYEYVTAKDFPETLPLLEKHKNI-LVLRTFSKAYGLASFRVGYAVGH-EELI-EKLNV-- 246 (366)
T ss_pred HHHhCCC----CCEEEEEccHHHhhccccCcchhHHhccCCCE-EEEeCchHHhcChHHHHhHHhCC-HHHH-HHHHH--
Confidence 7765421 35788899998764210000000011 12333 4445667765 588999998743 2221 11110
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY-KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
. ... + ....++|.++...+....+ ++..+...+.++++.+.++.++ +++..+ ..+++.++++
T Consensus 247 --~---~~~----~---~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~--~~nf~~~~~~-- 309 (366)
T PRK01533 247 --V---RLP----F---NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQS--QTNFIFLPVE-- 309 (366)
T ss_pred --h---cCC----C---CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCC--cCcEEEEeCC--
Confidence 0 001 1 1344566666666654444 4555666677888888888875 776543 6788888773
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+..++.+.|.++|+.|+.+ ..++||+++ +.+++++|+++|+++++-
T Consensus 310 ---~~~~~~~~l~~~GI~Vr~~--------~~~iRis~~---~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 310 ---NGGEIYEACAHAGFIIRPF--------PNGVRITVG---TREQNEGVISVLQQHFEN 355 (366)
T ss_pred ---CHHHHHHHHHHCCcEEccC--------CCceEEeCC---CHHHHHHHHHHHHHHHHh
Confidence 3468999999999998752 245999998 889999999999987654
No 80
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=211.80 Aligned_cols=313 Identities=15% Similarity=0.158 Sum_probs=222.2
Q ss_pred CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+.+.+++..+ ...|.. ++.. ++++++++++|.+.+ ..+++|+|+++++.+++.++.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~----~lr~~ia~~~~~~~~----~~I~~t~G~~~~i~~~~~~~~~~----- 104 (356)
T PRK04870 39 RLPAELRAELGERLAEVALNRYPD-PRAA----ALKAALRAAMGVPAG----ADVLLGNGSDELIQLLALACAKP----- 104 (356)
T ss_pred CCCHHHHHHHHHHhhccccccCCC-CCHH----HHHHHHHHHhCcCCC----CcEEEcCCHHHHHHHHHHHhcCC-----
Confidence 56788999998887643 233333 3433 455557888887642 13889999999998887776432
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I 224 (498)
+++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++.+ ++++|++++|+||||.+.+.+++
T Consensus 105 --------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~ 175 (356)
T PRK04870 105 --------GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADV 175 (356)
T ss_pred --------CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHH
Confidence 478999999999999999999999999999864 88999999999964 78999999999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
.++++.. ++++++|++|..+.. ......+ ..++ ..+..|..|++.++.++||++... +.+ +.+..
T Consensus 176 ~~i~~~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i-~~~~~- 241 (356)
T PRK04870 176 ERIIEAA------PGLVVVDEAYQPFAG----DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWI-AELDK- 241 (356)
T ss_pred HHHHHHC------CCEEEEECCchhhcC----cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHH-HHHHH-
Confidence 9999887 789999999987641 1110111 2233 356667888877788899987532 221 11110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
. ...+. ...+.|.++...+. .+.+++..++..++++++.+.|++++++.+.+ +..+++.++++
T Consensus 242 --~----~~~~~-------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~- 305 (356)
T PRK04870 242 --V----RPPYN-------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAANFILVRVP- 305 (356)
T ss_pred --c----cCCCc-------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC-
Confidence 0 00111 12233444443332 23467778888889999999999987777643 25678887774
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+..++.+.|.++|+.+...... .....+++|++++ +.+++++|+++|+++
T Consensus 306 ----~~~~~~~~l~~~gI~v~~~~~f-~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ----DAAAVFDGLKTRGVLVKNLSGM-HPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred ----CHHHHHHHHHHCCEEEEECCCC-CCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 3568999999999988643211 1123568999998 788999999998765
No 81
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=7.6e-23 Score=206.48 Aligned_cols=312 Identities=17% Similarity=0.134 Sum_probs=220.2
Q ss_pred CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+++.+++... ...|. .+... ++++.++++++.+.+ .+++|+|+++++.+++.++.++
T Consensus 35 ~~p~~~~~a~~~~~~~~~~~~y~-~~~~~----~lr~~ia~~~~~~~~-----~i~it~G~~~~l~~~~~~l~~~----- 99 (351)
T PRK14807 35 ELPEEVIKNIQEIVKSSQVNIYP-DPTAE----KLREELARYCSVVPT-----NIFVGNGSDEIIHLIMLAFINK----- 99 (351)
T ss_pred CCCHHHHHHHHHHhhcCcccCCC-CccHH----HHHHHHHHHhCCCcc-----cEEEecCHHHHHHHHHHHhcCC-----
Confidence 45677888887766532 22222 12333 455567888887653 3899999999998887776432
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I 224 (498)
+++|+++.++|..+...++..|++++.++++++ +.+|++++++++++ ++++|++++++||||.+.+.+++
T Consensus 100 --------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l 170 (351)
T PRK14807 100 --------GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED-YTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDI 170 (351)
T ss_pred --------CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHH
Confidence 478999999999999999999999999999764 78999999999975 89999999999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
.++++++ +.++++|++|+.+.- ....... ..++ .++..|..|.+ +++.++||++.. ++.. +.+..
T Consensus 171 ~~l~~~~------~~~~ivDe~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~~GlRiG~~v~~-~~~~-~~~~~ 237 (351)
T PRK14807 171 IKIIEKS------RGIVVVDEAYFEFYG----NTIVDVINEFEN-LIVLRTLSKAFGLAGLRVGYAVAN-ENIL-KYLNL 237 (351)
T ss_pred HHHHHhC------CCEEEEeCcchhhcc----cchHHHhhhCCC-EEEEecchHhcccchhceeeeecC-HHHH-HHHHH
Confidence 9999988 788999999987531 1110011 1233 35556777876 488999999842 2221 21110
Q ss_pred ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 303 ~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
. ...+. ...+.|.++...+....+.+..+...++++++.+.|++++++.+.. + +.+++.++++
T Consensus 238 ----~---~~~~~-------~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~-~~~~~~i~~~- 300 (351)
T PRK14807 238 ----V---KSPYN-------INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYP-S-KTNFILVKFK- 300 (351)
T ss_pred ----c---cCCCC-------cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-C-CccEEEEEcC-
Confidence 0 00111 1234566666666555567777888888999999998887787653 2 5666666663
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+..++++.|.++|+.+..+.... ....++|++++ +.+++++|++.|++++
T Consensus 301 ----~~~~~~~~l~~~gV~v~~~~~~~--~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 ----DADYVYQGLLERGILVRDFSKVE--GLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred ----CHHHHHHHHHHCCEEEEECCCCC--CCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 35789999999998886532211 22457999997 6688889988887653
No 82
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=2.5e-23 Score=212.69 Aligned_cols=336 Identities=15% Similarity=0.089 Sum_probs=224.6
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++..+.+.. +++.+.+.+.+.+......|....+..++++.+.+++.+++|.+.+.. ..+++|+|+++|+.+++.+
T Consensus 33 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~ 110 (386)
T PRK09082 33 INLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDAD--SEITVTAGATEALFAAILA 110 (386)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCCHHHHHHHHHHH
Confidence 3444433333 356778888777765444455667888999999999999999864321 1388999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
+..+ +++|+++.++|..+..+++.+|++++.++++++++.+|++++++++++++++|++++++||||
T Consensus 111 ~~~~-------------gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 177 (386)
T PRK09082 111 LVRP-------------GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSG 177 (386)
T ss_pred HcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCC
Confidence 6432 478999999999999999999999999999755589999999999988899999999999999
Q ss_pred cc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccC-CCCCCeEEEE
Q 010897 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVYAGVGWVV 289 (498)
Q Consensus 217 ~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~ 289 (498)
.+ +++++|.++|+++ ++++++|++|+.+.. ...... ..+ ....-..+..+..|.+ .++.++||++
T Consensus 178 ~~~~~~~~~~i~~~a~~~------~i~li~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv 249 (386)
T PRK09082 178 TVWSAADMRALWQLIAGT------DIYVLSDEVYEHIVF--DGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCV 249 (386)
T ss_pred cCCCHHHHHHHHHHHHHC------CEEEEEehhhhhhcc--CCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhh
Confidence 87 6788999999999 999999999987652 111111 011 1122345556778876 5778899998
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (498)
.. ++.+ ..+.....+. . ++ ...+.|.++...+ ..+.+++..+.+.++++++.+.|++.+ +++.
T Consensus 250 ~~-~~l~-~~~~~~~~~~-----~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~ 314 (386)
T PRK09082 250 AP-AALS-AEFRKVHQYN-----T----FT---VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FKLL 314 (386)
T ss_pred CC-HHHH-HHHHHHHhhh-----c----CC---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-Cccc
Confidence 53 2221 1111111110 0 11 1222233333333 344456666777788999999999865 7765
Q ss_pred eCCCCccEEEEEecCCCCCCHHHHHHHH-HhcCcEeeeec-CCCCCCCeeEEEEeecCCCCHHHHHHHH
Q 010897 368 SKDVGVPLVAFSLKDSSAHTVFEISEGL-RKFGWIVPAYT-MPANAENVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~G~~v~~~~-~~~~~~~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
.+. +..++.++++...+.+..++++.| .++|+.+.... +.....+.+++|+++.. .++++++.+
T Consensus 315 ~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--~~~~l~~~~ 380 (386)
T PRK09082 315 PCE-GTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--QEETLDAAA 380 (386)
T ss_pred CCC-eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC--CHHHHHHHH
Confidence 432 333444577521246778999986 57798775432 21111235689999973 344444333
No 83
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.93 E-value=9.7e-23 Score=210.08 Aligned_cols=351 Identities=14% Similarity=0.077 Sum_probs=230.4
Q ss_pred CCCCCcccccccC-----CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcC------CCCCCCCCccee
Q 010897 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFN------TPVADDKTAVGV 121 (498)
Q Consensus 54 ~~p~~~~~~~~~~-----~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g------~~~~~~~~~~~~ 121 (498)
+.+.++|..+.|. .+++.+.+++.+.++.+ ...|....+..++++.+.+++.+.++ .+.+ ...++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~---~~~i~ 108 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK---KDNVV 108 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC---hhhEE
Confidence 3344566666654 35677888888877753 23344444678888888888877554 2221 12489
Q ss_pred eecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhh
Q 010897 122 GTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD 200 (498)
Q Consensus 122 ~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~ 200 (498)
+|+|+++++.+++.++..+ +++|+++.++|..+...++..|++++.+++++ +++.+|+++|++++.
T Consensus 109 it~G~~~al~~~~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~ 175 (412)
T PTZ00433 109 LCSGVSHAILMALTALCDE-------------GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD 175 (412)
T ss_pred EeCChHHHHHHHHHHhcCC-------------CCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc
Confidence 9999999999988877432 46899999999999999999999999999863 357899999999998
Q ss_pred hCCeEEEEeeccCCccccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--cccCCCCeeEEEEcC
Q 010897 201 ENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSG 275 (498)
Q Consensus 201 ~~t~~v~~~~~~t~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~s~ 275 (498)
+++++|++++|+||||.+. ++++|.++|+++ |++|++|++|..+.. ...... ..+.-..-.++..|.
T Consensus 176 ~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~Sf 247 (412)
T PTZ00433 176 DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL------RLPLISDEIYAGMVF--NGATFTSVADFDTTVPRVILGGT 247 (412)
T ss_pred cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCeEEEecccccccc--CCCCccchhhccCCCceEEEccc
Confidence 8899999999999999875 477788899999 999999999998752 111100 011111112456678
Q ss_pred CccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHH
Q 010897 276 HKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNA 351 (498)
Q Consensus 276 hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a 351 (498)
.|.+ .++.++||++..++......+......+.. .. . ....+.|.++...+. ..-+++..+...+++
T Consensus 248 SK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~--~~----~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r 318 (412)
T PTZ00433 248 AKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM--LV----C---GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGA 318 (412)
T ss_pred hhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh--cc----C---CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 8865 889999999975432211111000000000 00 0 012233444444442 233556666777888
Q ss_pred HHHHHHHhcCCCeEEeeCCCCccEEEEEecCC---CCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCH
Q 010897 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDS---SAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSR 427 (498)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~---~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~ 427 (498)
+.+.+.|++..++.+..+. +.+++.++++.. +..+..+++++|. ++|+.+...... ...+++|+++.. ..
T Consensus 319 ~~l~~~L~~~~~~~~~~p~-gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f---~~~~~iRis~~~--~~ 392 (412)
T PTZ00433 319 MVLYNHIGECIGLSPTMPR-GSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIF---HMPGFTRLTISR--PV 392 (412)
T ss_pred HHHHHHHhcCCCCcccCCC-eeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCcccc---CCCCeEEEEecC--CH
Confidence 8899999886556654432 456666677431 1125678999987 579877543211 113589999974 35
Q ss_pred HHHHHHHHHHHHHHHH
Q 010897 428 SLVERLISHIEEVLKE 443 (498)
Q Consensus 428 ~~~~~l~~~l~~~l~~ 443 (498)
+++++.++.|.++++.
T Consensus 393 e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 393 EVLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677666666666554
No 84
>PLN02187 rooty/superroot1
Probab=99.93 E-value=1.2e-22 Score=211.35 Aligned_cols=338 Identities=12% Similarity=0.052 Sum_probs=223.9
Q ss_pred hHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 69 EPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
++++.+.+.+++..+. ..|....+..++++.+.+++.+.+|++.+. ..+++|+|+++++.+++.++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~---~~I~it~G~~~al~~~~~~l~~p------- 154 (462)
T PLN02187 85 CIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP---EDIFLTAGCNQGIEIVFESLARP------- 154 (462)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCHHHHHHHHHHHhcCC-------
Confidence 4568888888776542 345556677888888888888776665432 23899999999999988887543
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHH
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~ 223 (498)
+++|++++++|..+...++..|++++.+++. ++++.+|+++|++++++++++|++++|+||||.+.+ +++
T Consensus 155 ------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~ 228 (462)
T PLN02187 155 ------NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKK 228 (462)
T ss_pred ------CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHH
Confidence 5789999999999999999999999999985 345899999999999989999999999999999966 778
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCC-c-ccc-CCCCeeEEEEcCCcc-CCCCCCeEEEEEeCCCCCCcc
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~-~~~-~~~~~dsi~~s~hK~-l~~p~g~g~~~~~~~~~l~~~ 299 (498)
|.++|+++ +++|++|++|+.++. ..... . ..+ ....+ ++..|..|. +.++.++||++..+++.+...
T Consensus 229 i~~~a~~~------~i~iI~DE~Y~~l~f--~~~~~~s~~~~~~~~~v-i~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~ 299 (462)
T PLN02187 229 VAETARKL------GIMVISDEVYDRTIF--GDNPFVSMGKFASIVPV-LTLAGISKGWVVPGWKIGWIALNDPEGVFET 299 (462)
T ss_pred HHHHHHHC------CCEEEEecccccccc--CCCCceeHHHhccCCcE-EEEecchhhcCCccceeEEEEecCchhHHHH
Confidence 88899999 999999999998752 11111 0 111 11123 333455665 899999999997554321000
Q ss_pred cccccCccCCCCCCccccCCCchHHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEE
Q 010897 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL---GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV 376 (498)
Q Consensus 300 ~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (498)
. ..+......+.+... ...+.|.++...+ ..+-+++..+.+.++++.+.+.|++++.+..+..+.+.+++
T Consensus 300 ~----~~~~~~~~~~~~~~~---~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl 372 (462)
T PLN02187 300 T----KVLQSIKQNLDVTPD---PATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYL 372 (462)
T ss_pred H----HHHHHHHHhccccCC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEE
Confidence 0 000000000011000 1233444444444 23446777778888999999999998744333234355677
Q ss_pred EEEecCC--CCC-CHHHHHHH-HHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 377 AFSLKDS--SAH-TVFEISEG-LRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 377 ~f~~~~~--~~~-~~~~l~~~-L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.++++.. .+. +..+++.+ +.++|+.+.....- ...+++|++++. ..++++..++.|.++++.
T Consensus 373 ~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f---g~~~~iRis~~~--~~e~l~~al~rL~~~l~~ 438 (462)
T PLN02187 373 LTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDAL---GLKNWMRITIGV--EAHMLEDALERLKGFCTR 438 (462)
T ss_pred EeecChhhCCCCCCHHHHHHHHHhhCCEEEECcccc---CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 6666421 122 45566554 57889876533211 124689999974 456666666666665543
No 85
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=1.5e-23 Score=211.33 Aligned_cols=310 Identities=19% Similarity=0.183 Sum_probs=216.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+++|.+.+++.++.... ..|.. +... ++++.+++++|++.+ .+++|+|+++++.+++.++.++
T Consensus 32 ~~~~~~~~a~~~~~~~~-~~y~~-~~~~----~lr~~ia~~~~~~~~-----~i~~~~G~~~~l~~~~~~l~~~------ 94 (346)
T TIGR01141 32 GPPPKAKEALRAEADKL-HRYPD-PDPA----ELKQALADYYGVDPE-----QILLGNGSDEIIELLIRAFLEP------ 94 (346)
T ss_pred CCCHHHHHHHHHhHHHh-hcCCC-CCHH----HHHHHHHHHhCcChH-----HEEEcCCHHHHHHHHHHHhcCC------
Confidence 56678888888776432 22222 2223 455668888887542 3889999999987777665332
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|+++++.|..+...++..|++++.++++++ +.+|++++++++++++++|++++++||||.+.|++++.+
T Consensus 95 -------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~ 166 (346)
T TIGR01141 95 -------GDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED-GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEA 166 (346)
T ss_pred -------CCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC-CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 468999999999998889999999999999875 789999999998888999999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCcccc--CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~--~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
+++.+.+ ++++++|++|+.+.. ... ..++ ..+ -+.+..+.+|++ .++.++||++.+. +.+ +.+...
T Consensus 167 l~~~~~~----~~~ii~D~~y~~~~~---~~~-~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~-~~~~~~ 235 (346)
T TIGR01141 167 VLERTPE----DALVVVDEAYGEFSG---EPS-TLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYAIANA-EII-DALNKV 235 (346)
T ss_pred HHHhCCC----CcEEEEECchhhhcC---Ccc-HHHHHhhCC-CEEEEehhhHhhhchhhhceeeecCH-HHH-HHHHhc
Confidence 9987521 799999999986531 101 1111 122 245567889998 4566789998642 221 111110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
...++ ...+.|.+++..+... .+.+..++..++++++.+.|++++++++.++ ..+++.|.++.
T Consensus 236 -------~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~~~~~~~~~ 299 (346)
T TIGR01141 236 -------RAPFN-------LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DANFVLIRFPR 299 (346)
T ss_pred -------cCCCC-------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCCEEEEecCC
Confidence 00111 1123344444444332 4677788888899999999999877886533 46788887742
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+..++.++|.++|+.+........ . .+++|++++ +.++++++++.|
T Consensus 300 ----~~~~~~~~L~~~gI~v~~g~~f~~-~-~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 300 ----DADALFEALLEKGIIVRDLNSYPG-L-PNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred ----CHHHHHHHHHHCCeEEEeCCCcCC-C-CCeEEEecC---CHHHHHHHHHHh
Confidence 567999999999988754321111 1 567999986 788888887765
No 86
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=7.2e-23 Score=206.09 Aligned_cols=331 Identities=16% Similarity=0.051 Sum_probs=227.9
Q ss_pred ChHHHHHHHHH-HhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMA-SINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 68 ~~~~~~~~l~~-~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
..|.+.+.+.+ ..+.+...+...++..++++.+.+++...+|.+... ....+++|+++++..++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~---~~~~~~~~~t~a~~~~~~~~~~~------ 82 (350)
T cd00609 12 PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP---EEIVVTNGAQEALSLLLRALLNP------ 82 (350)
T ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ceEEEecCcHHHHHHHHHHhCCC------
Confidence 34554444443 344444555666788899999999998887753321 34889999999998887776432
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCH--HHHHHHhhhCCeEEEEeeccCCcccccCHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP--VKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~--~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I 224 (498)
+++|+++.+.|.++..+++.+|++++.++.+++ +.++. +.++..+++++++|++++++|++|.+.|++++
T Consensus 83 -------g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l 154 (350)
T cd00609 83 -------GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE-GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEEL 154 (350)
T ss_pred -------CCEEEEcCCCchhHHHHHHHCCCEEEEEecccc-cCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHH
Confidence 468999999999999999999999999999764 44554 67777778889999999999999999886665
Q ss_pred H---HHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccc
Q 010897 225 H---DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 225 ~---~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~ 300 (498)
. ++|+++ |+++++|+||+++..................|.+..+.||+++ ++.++|+++.++++.. +.+
T Consensus 155 ~~l~~~~~~~------~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~ 227 (350)
T cd00609 155 EELAELAKKH------GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERL 227 (350)
T ss_pred HHHHHHHHhC------CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHH
Confidence 5 899999 9999999999886531111000011233457888899999987 6678899987653222 221
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEe
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSL 380 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (498)
.....+. .++.+.....+....++... +++++..++..++++++.+.|++.+...+. .+....++.+.+
T Consensus 228 ~~~~~~~---------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~g~~~~~~~ 296 (350)
T cd00609 228 KKLLPYT---------TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSGGFFLWLDL 296 (350)
T ss_pred HHHHHhc---------ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCccEEEEEec
Confidence 1111111 02222234444444444332 678888899999999999999998744432 222456777777
Q ss_pred cCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 381 KDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 381 ~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
++. .+...+.+.|.+.|+.+........ ....++|++++.. .++++++++.|+
T Consensus 297 ~~~--~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 297 PEG--DDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred CCC--ChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 432 3456777888888988765432211 3456899999876 788888877765
No 87
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.92 E-value=3.9e-23 Score=212.66 Aligned_cols=358 Identities=15% Similarity=0.103 Sum_probs=231.0
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCC-------CCCcCCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY-------VDMDEYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~-------~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (498)
..+++..+.+.-..+ +..+|+... +.+++|.+.+++.+.+...+ ..+...+....+++.+++++++++|.+
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 4 DPEIAEIIKKENERQ-RETLELIAS-ENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CHHHHHHHHHHHHHH-HhCeeeecc-CCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 356666665542222 234444332 33567888888876543211 112233455677877888999999987
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH-----HHHcCCeeEEEEecCC
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-----ARYFEVELKEVKLEEG 186 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~-----~~~~g~~~~~v~~~~~ 186 (498)
. . .++.++|++|+.+++.++.++ +++|+++++.|.++... ++..|.+++.++++.+
T Consensus 82 ~-----~-~v~~~sgt~a~~~~l~~l~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 142 (402)
T cd00378 82 Y-----A-NVQPHSGSQANLAVYFALLEP-------------GDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVD 142 (402)
T ss_pred c-----e-eeecCCcHHHHHHHHHHhcCC-------------CCEEEEecCccCccccccccccccccceeEEEecCCcC
Confidence 4 1 334346789998888877432 46899999888754322 5667888777777533
Q ss_pred --ccccCHHHHHHHhh-hCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCc-ccccccccCCCCccc
Q 010897 187 --YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGFIAPFLYPDLEWD 262 (498)
Q Consensus 187 --~~~~d~~~L~~~i~-~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~-~g~~~~~~~~~~~~~ 262 (498)
++.+|++++++++. .++++|+++.+++ |...|+++|.++|+++ |+++++|++| .++.. .......
T Consensus 143 ~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~------~~~li~D~a~~~g~~~---~g~~~~~ 211 (402)
T cd00378 143 PETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEV------GAYLLVDMAHVAGLVA---GGVFPNP 211 (402)
T ss_pred cccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhc------CCEEEEEccchhhhhh---cccCCCc
Confidence 58899999999985 5788888777654 5677999999999999 9999999997 33321 1111112
Q ss_pred cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc-ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHH
Q 010897 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYK 341 (498)
Q Consensus 263 ~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~-~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~ 341 (498)
+. .+|++..++||++.++ +.|++++++++.. ..+.. ...+.. ++.....+.++..++..+...++.
T Consensus 212 ~~--~~dv~~~s~sK~l~G~-~gg~i~~~~~~~~-~~l~~~~~~~~~---------~~~~~~~~~a~~~al~~~~~~~~~ 278 (402)
T cd00378 212 LP--GADVVTTTTHKTLRGP-RGGLILTRKGELA-KKINSAVFPGLQ---------GGPHLHVIAAKAVALKEALEPEFK 278 (402)
T ss_pred cc--CCcEEEeccccCCCCC-CceEEEeccHHHH-HHHHHHhCcccc---------CCchHHHHHHHHHHHHHHhhHHHH
Confidence 22 5688899999998554 4577776543322 21111 001110 111122333334444434333567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCC---CCeeEEE
Q 010897 342 NIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANA---ENVAVLR 418 (498)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~---~~~~~lR 418 (498)
++.++..++++++.+.|++.+ ++++..+...+++.+++++. +.+...+.+.|.++|+.+.....|... .....+|
T Consensus 279 ~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~-~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lR 356 (402)
T cd00378 279 AYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPK-GITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIR 356 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCcc-CCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeE
Confidence 888889999999999999985 88765433567777777532 345667888899999988654444432 2346799
Q ss_pred EeecCC----CCHHHHHHHHHHHHHHHHH
Q 010897 419 VVVRED----FSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 419 v~v~~~----~t~~~~~~l~~~l~~~l~~ 443 (498)
++++.. .+.++++.+++.|+++++.
T Consensus 357 i~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 357 IGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred ecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 988653 3578888888888877754
No 88
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=4.9e-23 Score=209.66 Aligned_cols=371 Identities=13% Similarity=0.103 Sum_probs=246.9
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCCC-------CCcCCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~-------~~~~~~~~~~le~~~~~~la~l~g~~ 111 (498)
..++++.++++...+ ...++|..--. .++|.+.+++...+..-+. +|.......++|..+.+...++||.+
T Consensus 34 d~~~~~~~~~e~~rq-~~~l~LiasEN-~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~ 111 (493)
T PRK13580 34 EPRIAEAIRQELADQ-RSSLKLIASEN-YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE 111 (493)
T ss_pred CHHHHHHHHHHHHHH-hcCceEecccc-cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC
Confidence 356777776665433 22333332211 4567777777655443111 22333466889999999999999987
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHH----------------------HHHHHHhcCCCCCCcEEEEcC---CchhH
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRK----------------------WQQKRKEQGKPYDKPNIVTGA---NVQVC 166 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~----------------------~~~~~~~~g~~~~~~~Iv~s~---~~h~~ 166 (498)
. ..+-..+|+.||+.+..++..+ |.+.|+. .+++.|+.-+ -.|.+
T Consensus 112 ~------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~----~~gd~i~~l~l~~GGHlt 181 (493)
T PRK13580 112 H------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAE----LGNQRLLGMSLDSGGHLT 181 (493)
T ss_pred c------ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhcc----CCCCEEEeecCCCCCeee
Confidence 5 2455567899998888887753 2222221 1135665432 23433
Q ss_pred HHHHHHHcC--CeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 167 WEKFARYFE--VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 167 ~~~~~~~~g--~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
........| .+++..+++++++.+|++++++++.++++.|++++.++. |...|+++|.++|+++ |++++||
T Consensus 182 hg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~------gA~L~VD 254 (493)
T PRK13580 182 HGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV------GAVLMVD 254 (493)
T ss_pred cCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc------CCEEEEE
Confidence 322333344 456666677656889999999999999999999988888 5577999999999999 9999999
Q ss_pred cCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchH
Q 010897 245 AASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~ 323 (498)
+||+.+..+. ......+ ....+|++++++||++.+|.| |+++++.. .. +.+....+|+. ++....
T Consensus 255 ~AH~~Gligg--~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~-~~L~~a~P~i~---------gg~l~p 320 (493)
T PRK13580 255 MAHFAGLVAG--KVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YA-DAVDKGCPLVL---------GGPLPH 320 (493)
T ss_pred Cchhhceecc--ccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HH-HHHhhCCCccc---------CCCccH
Confidence 9998776431 1111011 134699999999999988886 77776642 11 11110111221 222234
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEee
Q 010897 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVP 403 (498)
Q Consensus 324 ~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~ 403 (498)
.+.+...++..+....++++.++..+++++|++.|.+.| |.++......++|.+.+.+. +.+...+.+.|.+.||++.
T Consensus 321 ~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~-~~~g~~a~~~L~e~GI~vn 398 (493)
T PRK13580 321 VMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSF-GLTGRQAESALLDAGIVTN 398 (493)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHCCeEEc
Confidence 555555556555444567788999999999999999987 88875433578998888432 2334577789999999998
Q ss_pred eecCCCCCCC---eeEEEEeecC----CCCHHHHHHHHHHHHHHHHHH
Q 010897 404 AYTMPANAEN---VAVLRVVVRE----DFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 404 ~~~~~~~~~~---~~~lRv~v~~----~~t~~~~~~l~~~l~~~l~~l 444 (498)
....|.+..+ ...||+++.. .++.++++++.+.|.++++..
T Consensus 399 ~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 399 RNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred cccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 7777776555 6789999877 456899999999998888654
No 89
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-22 Score=207.91 Aligned_cols=337 Identities=10% Similarity=0.033 Sum_probs=226.0
Q ss_pred CcccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
+++....+. ++++.+.+.+.+.++.. ...|. .++...+++.+.+++.+..|++.+.+ ..+++|+|+++++.+++.
T Consensus 35 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~G~~~al~~~~~ 111 (399)
T PRK07681 35 IDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNAD--KEVLLLMGSQDGLVHLPM 111 (399)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCC--CeEEECCCcHHHHHHHHH
Confidence 444444443 34567888888777542 22222 35778898899999988878764321 238899999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
++.++ ++.|++++++|..+...++..|++++.+|+++ +++.+|++++++.+.+++++|++++|+||
T Consensus 112 ~~~~~-------------Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NP 178 (399)
T PRK07681 112 VYANP-------------GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNP 178 (399)
T ss_pred HhCCC-------------CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCC
Confidence 76432 57899999999999999999999999999974 34788999999998888999999999999
Q ss_pred cccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC---CCCeeEEEEcCCccC-CCCCCeEE
Q 010897 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---LPLVKSINVSGHKYG-LVYAGVGW 287 (498)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~---~~~~dsi~~s~hK~l-~~p~g~g~ 287 (498)
||.+.+ +++|.++|+++ +++|++|++|+.+.. .......... .....++..|..|.+ .++.++||
T Consensus 179 TG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~ 250 (399)
T PRK07681 179 VPAMAHEDFFKEVIAFAKKH------NIIVVHDFAYAEFYF--DGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGY 250 (399)
T ss_pred cCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhee--CCCCCCChhhCCCCcccEEEEeecccccCCccceeEE
Confidence 999977 67788889999 999999999998752 1111111111 112234555778876 47788999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
++.. ++.+ +.+.....+. . .+ ...+.|.++...+. .+.+++..+...++++++.+.|++.+ +.
T Consensus 251 ~i~~-~~l~-~~~~~~~~~~-----~----~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 315 (399)
T PRK07681 251 MIGN-EEIV-RALTQFKSNT-----D----YG---VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-WN 315 (399)
T ss_pred EecC-HHHH-HHHHHHHhhc-----c----cC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-Cc
Confidence 9853 3222 2111100000 0 11 12233444444442 23445666667778888999999885 77
Q ss_pred EeeCCCCccEEEEEecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
+..+. +..++.+++++ +.+..++++.|.+ +|+.+...... ...+.+++|+++.. +.++++++++.|++
T Consensus 316 ~~~p~-~g~f~~~~l~~--~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRis~~~--~~~~~~~~l~~l~~ 384 (399)
T PRK07681 316 VDKPA-GSMFVWAEIPK--GWTSLSFAYALMDRANVVVTPGHAF-GPHGEGFVRIALVQ--DEEVLQQAVENIRN 384 (399)
T ss_pred ccCCC-eeeEEEEECCC--CCCHHHHHHHHHHhCCEEEeCChhh-CcCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 64443 55666667743 4677889999887 89877543211 11234689999973 45666666655554
No 90
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=7.6e-23 Score=209.40 Aligned_cols=323 Identities=15% Similarity=0.064 Sum_probs=215.8
Q ss_pred ccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH
Q 010897 60 LASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (498)
Q Consensus 60 ~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~ 138 (498)
+....+.. +++.+.+.+.+++......|....+..++++.+.+++.+.+|.+.+. ..+++|+|+++|+.+++.++.
T Consensus 35 l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~t~G~~~al~~~~~~l~ 111 (388)
T PRK07337 35 MGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP---ERIVVTAGASAALLLACLALV 111 (388)
T ss_pred eCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HhEEEecCcHHHHHHHHHHhc
Confidence 33333333 35677888888776544445555677889999999988888875432 238899999999988887764
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
++ +++|++++++|..+...++..|++++.+|+++ +++.+|++++++.+++++++|++++|+||||.
T Consensus 112 ~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~ 178 (388)
T PRK07337 112 ER-------------GDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGT 178 (388)
T ss_pred CC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCc
Confidence 32 47899999999999999999999999999974 45789999999999989999999999999999
Q ss_pred ccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeE-EEEcCCccC-CCCCCeEEEEEeC
Q 010897 218 FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS-INVSGHKYG-LVYAGVGWVVWRT 292 (498)
Q Consensus 218 ~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~ds-i~~s~hK~l-~~p~g~g~~~~~~ 292 (498)
+.+ +++|.++|+++ ++++++|++|.++.. .+......... .++ +..|.+|.+ +++.++||++..+
T Consensus 179 ~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~-~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 179 SIAPDELRRIVEAVRAR------GGFTIVDEIYQGLSY---DAAPVSALSLG-DDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred CcCHHHHHHHHHHHHHC------CCEEEEecccccccc---CCCCcChhhcc-CCEEEEEechhhcCCchhheeeeecCH
Confidence 865 67788888999 999999999987642 11110001111 223 344778876 5778899998643
Q ss_pred CCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
. .+ +.+.....+.. .+ ...+.|.+++..+.. +.+++..+...+.++++.+.|++.+ +.+...
T Consensus 249 ~-l~-~~l~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~~ 313 (388)
T PRK07337 249 A-LV-GTFEKLAQNLF---------IC---ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG-FKVPVM 313 (388)
T ss_pred H-HH-HHHHHHHHHhc---------cC---CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC-CccccC
Confidence 2 11 11110000110 00 122344444444432 3356666777788888999999875 543222
Q ss_pred CCCccEEEEEecCC---CCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecC
Q 010897 370 DVGVPLVAFSLKDS---SAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVRE 423 (498)
Q Consensus 370 ~~~~~~v~f~~~~~---~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~ 423 (498)
+.+.+++.++++.. +..+..+++++| .++|+.+.....-....+.+++|++++.
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~ 371 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT 371 (388)
T ss_pred CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC
Confidence 33556777777531 124677888775 5789887432211111234689999974
No 91
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=5.8e-24 Score=213.58 Aligned_cols=320 Identities=18% Similarity=0.070 Sum_probs=213.1
Q ss_pred cccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 61 ASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
.+..+.+++|.+.+++.++..... .+... ...+++++++++++| +. .+++++||++++.+++.++..+
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~----~~~~~l~~~~a~~~g-~~------~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGDD-VYGED----PTTAKLEARAAELFG-KE------AALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCCc-ccCCC----HHHHHHHHHHHHHhC-CC------eEEEecCchHHHHHHHHHhcCC
Confidence 444566788889888887653221 12112 234566777999999 32 2888889999998888776432
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHH---HHHHcCCeeEEEEecCCccccCHHHHHHHhhh-------CCeEEEEee
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NTICVAAIL 210 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-------~t~~v~~~~ 210 (498)
+++|++++++|.++.. .++..|++++.++.+. +.+|+++|++++++ ++++|++++
T Consensus 71 -------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~ 135 (338)
T cd06502 71 -------------GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLEN 135 (338)
T ss_pred -------------CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEe
Confidence 4689999999987654 3566899999998753 67999999999975 688999999
Q ss_pred ccCCccc--ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEE
Q 010897 211 GSTLTGE--FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (498)
Q Consensus 211 ~~t~tG~--~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~ 288 (498)
++|+.|. .+++++|.++|+++ |+++|+|+||..+....... ........+|+++.++||+++.|. |++
T Consensus 136 p~n~g~~~~~~~l~~i~~~~~~~------~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~~~--g~~ 205 (338)
T cd06502 136 TTEGGTVYPLDELKAISALAKEN------GLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGAPV--GAV 205 (338)
T ss_pred ecCCccccCHHHHHHHHHHHHHc------CCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCCcc--ceE
Confidence 9997442 46778899999999 99999999986443111111 101011357888999999997664 334
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
++.+++.+ +.+.......+ ++. ....+.+.+++..+...++.++.++..++++++.+.|++++ +.+..
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~---------~~~-~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~ 273 (338)
T cd06502 206 VVGNRDFI-ARARRRRKQAG---------GGM-RQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELG-GLESE 273 (338)
T ss_pred EECCHHHH-HHHHHHHHHhC---------CCh-hhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc
Confidence 44444332 11111000000 010 12334455666666655677888899999999999999987 54432
Q ss_pred CCCCccEEEEEecCCCCCCHHHHHHHHH---hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 369 KDVGVPLVAFSLKDSSAHTVFEISEGLR---KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~L~---~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
+..++++++++.. ..-...+.++|. ++|+.+... +..++|++++..+++++++++++.++.
T Consensus 274 --~~~~~~~v~~~~~-~~~~~~l~~~l~~~~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 274 --VQTNIVLLDPVEA-NAVFVELSKEAIERRGEGVLFYAW-------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred --ccCCeEEEecCCc-cHHHHHHHHHHHHhhhCCEEEEec-------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 2678988887432 112234555554 678776432 116799999988899999988887754
No 92
>PRK12414 putative aminotransferase; Provisional
Probab=99.92 E-value=5.2e-23 Score=210.19 Aligned_cols=332 Identities=13% Similarity=0.063 Sum_probs=219.9
Q ss_pred CcccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
++|..+.+. ++++.+.+++.+++......|....+..++++.+.+++++++|++.+.. ..+++|+|+++++.+++.+
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~--~~i~it~g~~~al~~~~~~ 109 (384)
T PRK12414 32 LNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPA--SEVTVIASASEGLYAAISA 109 (384)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEECChHHHHHHHHHH
Confidence 334443333 3467778887776654434455556788999999999999999863211 1389999999999888877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
+..+ +++|++++++|..+...++..|++++.++++++++.+|++.|++++++++++|++++++||||
T Consensus 110 l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG 176 (384)
T PRK12414 110 LVHP-------------GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSA 176 (384)
T ss_pred hcCC-------------CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCC
Confidence 6432 478999999999999999999999999999865588999999999988899999999999999
Q ss_pred cc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--cc-CCCCeeEEEEcCCccC-CCCCCeEEEE
Q 010897 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DF-RLPLVKSINVSGHKYG-LVYAGVGWVV 289 (498)
Q Consensus 217 ~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~ 289 (498)
.+ +++++|.++|+++ ++++++|++|..+.. ....... .+ ....-..+..|..|.+ .++.++||++
T Consensus 177 ~~~s~~~~~~i~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v 248 (384)
T PRK12414 177 TVFSAADLARLAQLTRNT------DIVILSDEVYEHVVF--DGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCL 248 (384)
T ss_pred cCCCHHHHHHHHHHHHHC------CeEEEEhhhhhhccC--CCCCccCcccCcCccCcEEEEecccccccCccceEEEEe
Confidence 98 5688889999999 999999999987642 1111100 11 1111235666788866 5888999998
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
...+ .+ ..+.....+. . .+ ...+.|.++...+.. ..+.+..+...+.++.+.+.|++.+ +.+..
T Consensus 249 ~~~~-l~-~~l~~~~~~~-----~----~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~ 313 (384)
T PRK12414 249 APAE-LM-DEIRKVHQFM-----V----FS---ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FELLP 313 (384)
T ss_pred cCHH-HH-HHHHHHHhhe-----e----cC---CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-CeecC
Confidence 5432 21 1111000000 0 00 122345444444432 2344556677788889999999885 77654
Q ss_pred CCCCccEEEE-EecCCCCCCHHHHH-HHHHhcCcEeeeec-CCCCCCCeeEEEEeecCCCCHHHHH
Q 010897 369 KDVGVPLVAF-SLKDSSAHTVFEIS-EGLRKFGWIVPAYT-MPANAENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 369 ~~~~~~~v~f-~~~~~~~~~~~~l~-~~L~~~G~~v~~~~-~~~~~~~~~~lRv~v~~~~t~~~~~ 431 (498)
+ ..+++.| ++++....+..+++ +.|.++|+.+.... +.....+.+++|+++.. +.++++
T Consensus 314 ~--~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~ 375 (384)
T PRK12414 314 S--EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLV 375 (384)
T ss_pred C--CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHH
Confidence 3 4566655 66421122344565 56678898775432 21111224689999974 344443
No 93
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=1.1e-22 Score=209.25 Aligned_cols=347 Identities=15% Similarity=0.045 Sum_probs=228.4
Q ss_pred CCCcccccccC-----CChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHH
Q 010897 56 PRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (498)
Q Consensus 56 p~~~~~~~~~~-----~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea 129 (498)
.-++|..+.|. .+++.+.+++.+++..+. ..|....+..++++.+.+++.+..|.+.+. ..+++|+|++++
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~a 108 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL---DDVFITSGCTQA 108 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc---ccEEEeCChHHH
Confidence 33455555553 446778888888887653 456666677889888888888877765432 238899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEE
Q 010897 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAA 208 (498)
Q Consensus 130 ~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~ 208 (498)
+.+++.++.++ +++|++++++|..+...++..|++++.++++ ++++.+|++++++++++++++|++
T Consensus 109 l~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l 175 (409)
T PLN02656 109 IDVALSMLARP-------------GANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVI 175 (409)
T ss_pred HHHHHHHHhCC-------------CCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEE
Confidence 98888876432 4689999999999999999999999999985 345789999999999888999999
Q ss_pred eeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-Ccc-cc-CCCCeeEEEEcCCcc-CCC
Q 010897 209 ILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DF-RLPLVKSINVSGHKY-GLV 281 (498)
Q Consensus 209 ~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~~-~~-~~~~~dsi~~s~hK~-l~~ 281 (498)
++|+||||.+ +++++|.++|+++ +++|++|++|+.+.. .... ... .+ ...+ .++..|..|. +.+
T Consensus 176 ~~P~NPtG~~~s~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~-vi~~~SfSK~f~~p 246 (409)
T PLN02656 176 INPGNPCGNVYSYQHLKKIAETAEKL------KILVIADEVYGHLAF--GSNPFVPMGVFGSIVP-VLTLGSLSKRWIVP 246 (409)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEehhhhhccc--CCCCcccHHHhcccCc-EEEEcccchhccCc
Confidence 9999999999 5688899999999 999999999998752 1111 110 11 1122 3344567775 889
Q ss_pred CCCeEEEEEeCCCCCC--cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHH
Q 010897 282 YAGVGWVVWRTKDDLP--DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~--~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~ 356 (498)
+.++||++..+++.+. ..+.....-... . . +. ...+.|.++...+. ...+++..+...+.++.+.+
T Consensus 247 GlRiG~~i~~~~~~~~~~~~~~~~~~~~~~---~--~-~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 317 (409)
T PLN02656 247 GWRLGWFVTTDPSGSFRDPKIVERIKKYFD---I--L-GG---PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCD 317 (409)
T ss_pred ceeEEEEEEeCcccccccHHHHHHHHHHHh---h--h-cC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999975432210 010000000000 0 0 01 12334555555542 33467777778888999999
Q ss_pred HHhcCCCeEEeeCCCCccEEEEEecCC--CCC-CHHH-HHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHH
Q 010897 357 GLEKTGRFEILSKDVGVPLVAFSLKDS--SAH-TVFE-ISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~-l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
.|++++++.....+.+..++.++++.. ... +..+ +.+.|.++|+.+...... ...+++|+++.. +.+++++
T Consensus 318 ~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f---g~~~~iRi~~~~--~~e~l~e 392 (409)
T PLN02656 318 RIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAV---GLKNWLRITFAA--DPSSLEE 392 (409)
T ss_pred HHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhc---CCCCeEEEEeCC--CHHHHHH
Confidence 999886543222333445555566421 111 3434 456778889877543221 124689999974 4555554
Q ss_pred HHHHHHHHH
Q 010897 433 LISHIEEVL 441 (498)
Q Consensus 433 l~~~l~~~l 441 (498)
-++.|++++
T Consensus 393 al~rl~~~~ 401 (409)
T PLN02656 393 ALGRIKSFY 401 (409)
T ss_pred HHHHHHHHH
Confidence 454454444
No 94
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.9e-23 Score=207.60 Aligned_cols=313 Identities=17% Similarity=0.170 Sum_probs=219.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+++......|. .++.. ++++.++++++++.+ .+++|+|+++++.+++.++.++
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~~-----~I~it~G~~~al~~~~~~l~~~------ 100 (353)
T PRK05387 37 PPSPKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDPE-----QVFVGNGSDEVLAHAFLAFFNH------ 100 (353)
T ss_pred CCCHHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------
Confidence 3467788888877664333332 22322 566668888887653 3999999999999988887543
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|++++++|..+...++..|++++.+|++++ +.+|++++++ ++++|++++|+||||.+.+.+++.+
T Consensus 101 -------gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~ 168 (353)
T PRK05387 101 -------DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD-FSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIER 168 (353)
T ss_pred -------CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC-CCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 478999999999999999999999999999764 8899999864 4578899999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
+++.+. ++++++|++|+.+.. ....... ..++ +++..+..|.++ .+.++||++.. ++.+ +.+...
T Consensus 169 l~~~~~-----~~~livDe~y~~~~~----~~~~~~~~~~~~-~i~~~S~SK~~~~~GlR~G~~~~~-~~~~-~~l~~~- 235 (353)
T PRK05387 169 ILAANP-----DSVVVIDEAYVDFGG----ESAIPLIDRYPN-LLVVQTFSKSRSLAGLRVGFAIGH-PELI-EALNRV- 235 (353)
T ss_pred HHHhCC-----CcEEEEeCcccccCC----cchHHHHhhCCC-EEEEEehhHhhcchhhhceeeecC-HHHH-HHHHHh-
Confidence 998753 899999999976531 1110011 1233 467778899664 77889999843 2221 111100
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
...... ++ ...+.|.++...+. .+.+++..++..++++++.+.|++++ +++.+ +..+++.+.++
T Consensus 236 ---~~~~~~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~~~~~~~~~~-- 300 (353)
T PRK05387 236 ---KNSFNS----YP---LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-FEVLP--SKANFVFARHP-- 300 (353)
T ss_pred ---hccCCC----CC---cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECC--CcCcEEEEECC--
Confidence 000001 11 23345555555554 34467778888889999999999985 77653 25667766654
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
..+..+++++|.++|+.+..+..+ ...+++|++++ +.++++++++.|++++.
T Consensus 301 -~~~~~~~~~~l~~~gi~v~~~~~~---~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 -SHDAAELAAKLRERGIIVRHFNKP---RIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred -CCCHHHHHHHHHHCCEEEEECCCC---CCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 257789999999999988643222 23468999997 67899999998887653
No 95
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=6.4e-23 Score=210.66 Aligned_cols=343 Identities=18% Similarity=0.122 Sum_probs=225.9
Q ss_pred cCCCCCcccccc-cCC-ChHHHHHHHHHHhccCCCCCc---CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFV-TTW-MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~-~~~-~~~~~~~~l~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|++.+++.+.. +.. ++|.+.+++.+.+..+...+. ...+..++.+++.+++++++|.+. ..++|+| +
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~------~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED------AILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCc------EEEEcCh-H
Confidence 345555566543 223 567788888887765432222 224667888899999999999752 2555555 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh------
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------ 201 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~------ 201 (498)
+++..++.++.+ .+++|++++++|+++...++..|++++.++. +|++++++.+++
T Consensus 113 ~a~~~~~~~l~~-------------~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~ 173 (397)
T PRK06939 113 DANGGLFETLLG-------------KEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGA 173 (397)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCC
Confidence 888777665532 2579999999999999999999998877653 578888888764
Q ss_pred CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC-CCeeEEEEcCCccCC
Q 010897 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGL 280 (498)
Q Consensus 202 ~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~-~~~dsi~~s~hK~l~ 280 (498)
++++|+.....+++|.++++++|.++|+++ ++++++|++|+.+..+.........+.+ +.+|++..+.+|++.
T Consensus 174 ~~~~v~~~~v~~~~G~~~~~~~l~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 174 RHKLIATDGVFSMDGDIAPLPEICDLADKY------DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG 247 (397)
T ss_pred CCeEEEEecCcCCCCCcCCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC
Confidence 577777666788899999999999999999 9999999999633211110000001121 347889999999996
Q ss_pred CCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 281 ~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
++ .+||++.+. +.+ +.+... ...+...++.......+..++++.+. + ..+..++..++++++.+.|++
T Consensus 248 g~-r~G~v~~~~-~~~-~~l~~~-------~~~~~~~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~ 315 (397)
T PRK06939 248 GA-SGGYTAGRK-EVI-DWLRQR-------SRPYLFSNSLAPAIVAASIKVLELLE-E-SDELRDRLWENARYFREGMTA 315 (397)
T ss_pred cc-CceEEEeCH-HHH-HHHHHh-------CccccccCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHH
Confidence 54 568887543 222 221110 00111112222222333444454442 1 246677888899999999998
Q ss_pred CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
++ +++..+ ..+++.+.+++ ..+..+++++|.++|+.+....++....+..++|++++...+.++++++++.|+++
T Consensus 316 ~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~ 390 (397)
T PRK06939 316 AG-FTLGPG--EHPIIPVMLGD--AKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKV 390 (397)
T ss_pred cC-CCcCCC--CCCEEEEEECC--HHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 85 665432 34555555532 23567899999999988764433322233468999998778999999999999888
Q ss_pred HHHH
Q 010897 441 LKEI 444 (498)
Q Consensus 441 l~~l 444 (498)
++.+
T Consensus 391 ~~~~ 394 (397)
T PRK06939 391 GKEL 394 (397)
T ss_pred HHHh
Confidence 7653
No 96
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=3.6e-23 Score=209.00 Aligned_cols=321 Identities=13% Similarity=0.085 Sum_probs=212.1
Q ss_pred HHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 010897 75 LVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK 154 (498)
Q Consensus 75 ~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~ 154 (498)
++.+++....+ ...+...+ +++.+++++|.+. .+++++|++|+.+++.++... .+
T Consensus 4 ~~~~~~~~~~~--~~~~~~~~----~~~~la~~~~~~~-------~~~~~sgt~al~~~l~~l~~~------------~g 58 (352)
T cd00616 4 AVEEVLDSGWL--TLGPKVRE----FEKAFAEYLGVKY-------AVAVSSGTAALHLALRALGIG------------PG 58 (352)
T ss_pred HHHHHHHcCCc--cCCHHHHH----HHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC------------CC
Confidence 34455555443 22344444 4455888888753 788889999998888776311 14
Q ss_pred cEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcc
Q 010897 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (498)
Q Consensus 155 ~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~ 234 (498)
++|+++.++|.+...++...|++++.++++++++.+|++++++.+++++++|+++ +++|...|+++|.++|+++
T Consensus 59 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~--- 132 (352)
T cd00616 59 DEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPV---HLYGNPADMDAIMAIAKRH--- 132 (352)
T ss_pred CEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCCHHHHHHHHHHc---
Confidence 6899999999999999999999999999987458899999999998889988776 4689999999999999999
Q ss_pred cCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc-cCccCCC--
Q 010897 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSD-- 310 (498)
Q Consensus 235 ~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~-~~yl~~~-- 310 (498)
++++++|+||+.+.. +.. . ..+ ...++++++++||++.++. .|+++.++++.+....... ..+....
T Consensus 133 ---~i~li~D~a~~~g~~-~~~-~---~~~~~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (352)
T cd00616 133 ---GLPVIEDAAQALGAT-YKG-R---KVGTFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDRFK 203 (352)
T ss_pred ---CCeEEEECCCCCCCe-ECC-E---EcccCcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCCCc
Confidence 999999999976542 111 0 011 1123344444669984443 4667666543321110000 0000000
Q ss_pred CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC----CccEEEEEecCCCCC
Q 010897 311 QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----GVPLVAFSLKDSSAH 386 (498)
Q Consensus 311 ~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----~~~~v~f~~~~~~~~ 386 (498)
...... +.......+....++ ...+++.++.++..++++++.+.|+++++++++.+++ ...+++|.+++..+.
T Consensus 204 ~~~~~~-~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (352)
T cd00616 204 YEHEIL-GYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGE 280 (352)
T ss_pred ccccee-eeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCC
Confidence 000011 111011122222222 2335567788888999999999999998898876432 245778887532246
Q ss_pred CHHHHHHHHHhcCcEeeeecCCCCCCC--------------------eeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 387 TVFEISEGLRKFGWIVPAYTMPANAEN--------------------VAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 387 ~~~~l~~~L~~~G~~v~~~~~~~~~~~--------------------~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
+..++.+.|.++|+.+..++.|..... ...+|++++..+|.++++++++.|+
T Consensus 281 ~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 788999999999997765544321110 2689999999999999998887763
No 97
>PRK08912 hypothetical protein; Provisional
Probab=99.92 E-value=1.9e-22 Score=206.37 Aligned_cols=331 Identities=15% Similarity=0.094 Sum_probs=218.5
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
++.+.+.+.+.+......|....+..++++.+.+++.+.+|++.+.. ..+++|+|+++++.+++.++.++
T Consensus 41 p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~~~~~~~-------- 110 (387)
T PRK08912 41 PEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPE--TEVMVTSGATEALAAALLALVEP-------- 110 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCc--ccEEEeCCcHHHHHHHHHHhcCC--------
Confidence 45566666666544334455556778899999999988888754321 13899999999998777776432
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLH 225 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~ 225 (498)
+++|+++.++|..+...++..|++++.++++++++.+|++++++.+.+++++|++++|+||||.+.+ +++|.
T Consensus 111 -----gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~ 185 (387)
T PRK08912 111 -----GDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLA 185 (387)
T ss_pred -----CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHH
Confidence 4689999999999999999999999999997545889999999999888999999999999999876 66788
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~ 301 (498)
++|+++ ++++++|++|+.+.. ...... ..+ +....+++..|.+|.++ ++.++||++... +.+ +.+.
T Consensus 186 ~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~-~~l~ 255 (387)
T PRK08912 186 EFCQRH------DAVAICDEVWEHVVF--DGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP-PLL-RVLA 255 (387)
T ss_pred HHHHHC------CeEEEEhhhhhhccc--CCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH-HHH-HHHH
Confidence 999999 999999999987642 110100 011 22234577788899765 677899998643 221 1111
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEE
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (498)
...... . ++.+.. .+.++...+. .+-+++..++..++++++.+.|++.+ +++..+. +..++.+.
T Consensus 256 ~~~~~~-----~----~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-g~~~l~~~ 321 (387)
T PRK08912 256 KAHQFL-----T----FTTPPN---LQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQ-GTYFLTVD 321 (387)
T ss_pred HHHhhc-----c----ccCChH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCC-cceEEEec
Confidence 000000 0 111111 1222222221 23346667777889999999999985 7766432 33345556
Q ss_pred ecC-CCCCCHHHHHHHHH-hcCcEeeeec-CCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 380 LKD-SSAHTVFEISEGLR-KFGWIVPAYT-MPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 380 ~~~-~~~~~~~~l~~~L~-~~G~~v~~~~-~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+++ ....+..+++++|. ++|+.+.... +.......+++|+++.. ..++++..++.|+++
T Consensus 322 l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~ 383 (387)
T PRK08912 322 LAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAA 383 (387)
T ss_pred ccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHH
Confidence 643 11246778999875 6798775432 21111234689999984 345554444444433
No 98
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=1e-22 Score=205.70 Aligned_cols=313 Identities=17% Similarity=0.167 Sum_probs=216.9
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
.+++.+.+++.+.+..-. .|.. ++.. ++++.++++++++.+ .+++|+|+++++.+++.++ .
T Consensus 32 ~~p~~~~~a~~~~~~~~~-~Y~~-~~~~----~lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~~~~~-~------- 92 (354)
T PRK06358 32 GVPESLKQAITENLDKLV-EYPD-PDYL----ELRKRIASFEQLDLE-----NVILGNGATELIFNIVKVT-K------- 92 (354)
T ss_pred CCCHHHHHHHHHHHHhhh-cCCC-ccHH----HHHHHHHHHhCCChh-----hEEECCCHHHHHHHHHHHh-C-------
Confidence 345778888777664322 2221 2333 455567777787653 3999999999998877664 1
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VK 222 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~ 222 (498)
.+.|++++++|..+...++..|++++.+++++ +++.+| +++.+.+.+++++|++++|+||||.+.+ ++
T Consensus 93 -------~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~ 164 (354)
T PRK06358 93 -------PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMK 164 (354)
T ss_pred -------CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHH
Confidence 14699999999999999999999999999973 347899 6666667777899999999999999976 67
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-c-cc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-W-DF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~-~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~ 298 (498)
+|.++|+++ ++++++|++|..+.. ...... . .. ..+++. +..|..|.++ ++.++||++..++... .
T Consensus 165 ~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~vi-~~~S~SK~~gl~G~RiG~lv~~~~~~~-~ 234 (354)
T PRK06358 165 KILDKCEKR------NIYLIIDEAFMDFLE--ENETISMINYLENFKNLI-IIRAFTKFFAIPGLRLGYGLTSNKNLA-E 234 (354)
T ss_pred HHHHHHHhc------CCEEEEeCcccccCC--CccchhHHHhccCCCCEE-EEEechhhccCcchhheeeecCCHHHH-H
Confidence 778888899 999999999998752 111000 0 11 123443 4456777664 8999999986443221 1
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY-KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
.+. .....+ ....++|+++...+....+ .+..+...+.++++.+.|++++++.+..+ ..+++.
T Consensus 235 ~~~-------~~~~~~-------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~ 298 (354)
T PRK06358 235 KLL-------QMREPW-------SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVNFIF 298 (354)
T ss_pred HHH-------HhCCCC-------cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cceEEE
Confidence 110 000111 1345566666666654444 67777788889999999999876776644 467777
Q ss_pred EEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 378 FSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+++++ ..+++++|.++|+.+.....- ...+..++|++++ +.+++++|++.|++++
T Consensus 299 ~~~~~-----~~~~~~~l~~~gI~v~~~~~f-~~~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLEK-----PIDLRKELLKKGILIRSCSNY-RGLDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred EEcCc-----hHHHHHHHHHCCeEEEECCCC-CCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 77743 368999999999887644321 1223568999998 7899999999998765
No 99
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=1.5e-22 Score=204.58 Aligned_cols=323 Identities=14% Similarity=0.092 Sum_probs=215.7
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH---H
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ---Q 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~---~ 143 (498)
.+++++.++|.++++. + .....+.+++.+++++++|.+. +++|+|+|+|+++++.++..+-. -
T Consensus 24 ~~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~~~a~~~g~~~-------~~~~~g~t~al~~al~al~~~Gd~~~~ 89 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN-Y------FEIKELVNKTGEYIANLLGVED-------AVIVSSASAGIAQSVAAVITRGNRYLV 89 (363)
T ss_pred CCCHHHHHHHHHHHhc-C------CCHHHHHHHHHHHHHHhhCCCe-------EEEEcCHHHHHHHHHHHHhcCCCcchh
Confidence 3678899999888653 2 2345777889999999999863 79999999999999988754200 0
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHH----HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEE-EeeccCCcccc
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA-AILGSTLTGEF 218 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~----~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~-~~~~~t~tG~~ 218 (498)
.+ .......+++|+++.+.+..| ...+.+.|++++.++++ +.+|+++++++|+++|++|+ ++.+++++|.+
T Consensus 90 ~~-~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~ 165 (363)
T TIGR01437 90 EN-LHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSHHCVQKSM 165 (363)
T ss_pred hc-ccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecCCCCcCCc
Confidence 00 000011234788887544433 56778889999998863 46999999999999998766 46678899999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
.|+++|.++|+++ |+++|+|+||+.. +. .+...++|++++|+||++.+|. .|+++.+ ++.+ +
T Consensus 166 ~~~~~i~~~a~~~------gi~vivD~a~~~~---~~------~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~-~~~i-~ 227 (363)
T TIGR01437 166 LSVEDAAQVAQEH------NLPLIVDAAAEED---LQ------KYYRLGADLVIYSGAKAIEGPT-SGLVLGK-KKYI-E 227 (363)
T ss_pred CCHHHHHHHHHHc------CCeEEEECCCCCc---hH------HHHHcCCCEEEEeCCcccCCCc-eEEEEEc-HHHH-H
Confidence 9999999999999 9999999999721 10 0001147999999999998886 7887753 3222 1
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC------
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG------ 372 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~------ 372 (498)
.... +..+....+ ......++++.+++..+...+. +..++..++++++.+.|+++++++++.....
T Consensus 228 ~~~~---~~~~~~~~~----~~~~~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~ 299 (363)
T TIGR01437 228 WVKL---QSKGIGRAM----KVGKENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIA 299 (363)
T ss_pred HHHh---ccCCCccee----ccCHHHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCc
Confidence 1111 011100000 1111346677777766644333 3344455567789999999988988743211
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcC--cEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFG--WIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G--~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
...+.|... ..+.+..++.+.|.++| ++.+.+. ...+.+|+..+. ++.+|++.+++.|+++
T Consensus 300 ~~~v~~~~~-~~g~~~~~l~~~L~~~~~~I~~r~~~-----~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 300 RAEIRFDES-ELGMTAADVVQALRQGEPAIYTRGYK-----ANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred eEEEEEecc-CCCCCHHHHHHHHhcCCCCEEEeeee-----ecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 123444432 13578899999999888 4444332 223457888764 6789999998888765
No 100
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.92 E-value=2.6e-22 Score=205.51 Aligned_cols=342 Identities=15% Similarity=0.121 Sum_probs=225.6
Q ss_pred CcccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++....+. .+++.+.+.+.+++......|....+..++++.+.+++...+|++.... ..+++|+|+++++.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~ 110 (391)
T PRK07309 33 LKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPE--NEILVTIGATEALSASLTA 110 (391)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHHH
Confidence 344443333 3356677887777655433455556778899999999888778753211 2388999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccC
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGST 213 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t 213 (498)
+..+ +++|++++++|..+...++..|++++.++++++++.+|+++|+++++. ++++|++++|+|
T Consensus 111 ~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~N 177 (391)
T PRK07309 111 ILEP-------------GDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPAN 177 (391)
T ss_pred hcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCC
Confidence 6432 468999999999999999999999999998765578999999999864 578999999999
Q ss_pred Cccccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc---cCCCCeeEEEEcCCccC-CCCCCeE
Q 010897 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD---FRLPLVKSINVSGHKYG-LVYAGVG 286 (498)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~---~~~~~~dsi~~s~hK~l-~~p~g~g 286 (498)
|||... ++++|.++|+++ ++++++|++|+.+.. .... ... +..++ .++..|.+|.+ .++.++|
T Consensus 178 PtG~~~s~~~~~~l~~~~~~~------~~~ii~D~~y~~~~~--~~~~-~~~~~~~~~~~-~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 178 PTGVTYSREQIKALADVLKKY------DIFVISDEVYSELTY--TGEP-HVSIAEYLPDQ-TILINGLSKSHAMTGWRIG 247 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CcEEEEEccccceee--CCCC-CCCHHHhccCC-EEEEecChhhccCccceeE
Confidence 999975 488889999999 999999999998752 1111 111 11123 34556778876 5778899
Q ss_pred EEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH--HHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010897 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF--EGYKNIMENCMGNARALREGLEKTGRF 364 (498)
Q Consensus 287 ~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~--~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (498)
|++... +.+ +.+.....|... + ...+.|.++...+.. .......++..+.++++.+.|++.+ +
T Consensus 248 ~~v~~~-~~~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 312 (391)
T PRK07309 248 LIFAPA-EFT-AQLIKSHQYLVT--------A----ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-F 312 (391)
T ss_pred EEEeCH-HHH-HHHHHHHhhccc--------C----CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 998543 222 111111111100 1 122234444444432 2223445566678888999999885 7
Q ss_pred EEeeCCCCccEE-EEEecCCCCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 365 EILSKDVGVPLV-AFSLKDSSAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 365 ~~~~~~~~~~~v-~f~~~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+..+ ..+++ .+++++....+..+++++| .++|+.+.....- ...+..++|+++.. +.++++..++.|+++++
T Consensus 313 ~~~~p--~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f-~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 313 KIIKP--DGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAF-GPYGEGYVRLSYAA--SMETIKEAMKRLKEYME 387 (391)
T ss_pred eecCC--CeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 76644 34444 4466532223567888775 5689877433211 12235789999874 56778877777777775
Q ss_pred HH
Q 010897 443 EI 444 (498)
Q Consensus 443 ~l 444 (498)
++
T Consensus 388 ~~ 389 (391)
T PRK07309 388 EH 389 (391)
T ss_pred hh
Confidence 54
No 101
>PRK07324 transaminase; Validated
Probab=99.92 E-value=2.3e-22 Score=204.51 Aligned_cols=315 Identities=13% Similarity=0.056 Sum_probs=206.5
Q ss_pred HHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010897 74 KLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (498)
Q Consensus 74 ~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~ 153 (498)
+++.+++......|....+..++++.+.+++. +.++ ..+++|+|+++|+.+++.++.++
T Consensus 45 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~-----~~vi~t~G~~~al~~~~~~l~~~------------- 103 (373)
T PRK07324 45 EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKP-----ENILQTNGATGANFLVLYALVEP------------- 103 (373)
T ss_pred HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCCh-----hhEEEcCChHHHHHHHHHHhCCC-------------
Confidence 66667777665666665677777776444432 3433 23899999999999988877432
Q ss_pred CcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHH
Q 010897 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLT 229 (498)
Q Consensus 154 ~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~ 229 (498)
+++|+++.++|..+...++..|++++.+|+++ +++.+|++++++++.++|++|++++|+||||.+.+ +++|+++|+
T Consensus 104 gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~ 183 (373)
T PRK07324 104 GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIAR 183 (373)
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999974 44779999999999889999999999999999987 888999999
Q ss_pred HhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCcc
Q 010897 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYL 307 (498)
Q Consensus 230 ~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl 307 (498)
++ |+++++|++|.++.. ......... .++. +...+..|.+ +++.++||++. +++.+ +.+.....+.
T Consensus 184 ~~------~~~ii~De~y~~l~~---~~~~~s~~~~~~~~-I~~~s~SK~~~~~G~RiG~i~~-~~~li-~~~~~~~~~~ 251 (373)
T PRK07324 184 SV------DAYVLSDEVYRPLDE---DGSTPSIADLYEKG-ISTNSMSKTYSLPGIRVGWIAA-NEEVI-DILRKYRDYT 251 (373)
T ss_pred HC------CCEEEEEcccccccc---CCCCCChhhccCCE-EEEecchhhcCCccceeEEEec-CHHHH-HHHHHHhCcE
Confidence 99 999999999988642 111110011 1232 3445777865 47788999986 33222 2111110110
Q ss_pred CCCCCCccccCCCchHHHHHHHHHHHHhc-HH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCC
Q 010897 308 GSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FE-GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA 385 (498)
Q Consensus 308 ~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~ 385 (498)
++ + ...+.++++...+. .+ -.++..+...++++.+.+.|++.+++....+. +.....+.++. .
T Consensus 252 -------~~--~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~-gg~~~~i~~~~--~ 316 (373)
T PRK07324 252 -------MI--C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK-AVSTSFVKLDV--D 316 (373)
T ss_pred -------Ee--c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC-ceEEEEEEeCC--C
Confidence 11 0 12234444444443 22 23444555566788888889888767665443 33333445532 3
Q ss_pred CCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 386 ~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+..+++++|. +.|+.+....... ..+++|+++.. +++.+++-++.|++++
T Consensus 317 ~~~~~~~~~ll~~~gv~v~pg~~F~---~~~~iRis~~~--~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 317 MPSEDFCLKLLKETGVLLVPGNRFD---LEGHVRIGYCC--DTETLKKGLKKLSEFL 368 (373)
T ss_pred CCHHHHHHHHHHhcCEEEECccccC---CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 56778999875 6798765432111 13589999863 4555554444444444
No 102
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=1.1e-22 Score=208.03 Aligned_cols=338 Identities=15% Similarity=0.090 Sum_probs=220.2
Q ss_pred cCCCCCccccccc-C-CChHHHHHHHHHHhccCCCC---CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFVT-T-WMEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~~-~-~~~~~~~~~l~~~~~~n~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+++.+..+ . .++|.+.+++.+.+...... +....+...+..++++++++++|.+. .+++++|+
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER-------ALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHH
Confidence 3444444444322 2 34678888888877652211 11112344566778888999998532 66777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC---Ce
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TI 204 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~---t~ 204 (498)
++++.++.++.+ .+++|+++++.|.++...++..|++++.++. .|++.+++.+++. +.
T Consensus 110 ~~~~~~l~~~~~-------------~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~i~~~~~~~~ 170 (385)
T PRK05958 110 AANLAVLTALAG-------------KGDLIVSDKLNHASLIDGARLSRARVRRYPH------NDVDALEALLAKWRAGRA 170 (385)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeCccCHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhccCCCe
Confidence 888766654422 1468999999999999999999999888764 4788999988753 55
Q ss_pred EEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--ccCCCCeeEEEEcCCccCCCC
Q 010897 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSINVSGHKYGLVY 282 (498)
Q Consensus 205 ~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~~~~~~dsi~~s~hK~l~~p 282 (498)
++++..++|++|...|+++|.++|+++ |+++++|++|+.+..+........ .+....-+++..+.||++. +
T Consensus 171 lvi~~~~~~~~G~~~~l~~i~~ia~~~------~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~ 243 (385)
T PRK05958 171 LIVTESVFSMDGDLAPLAELVALARRH------GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-S 243 (385)
T ss_pred EEEEEecccCCCCcCCHHHHHHHHHHh------CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-c
Confidence 666667889999999999999999999 999999999976532110000110 1111123466788999985 4
Q ss_pred CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (498)
Q Consensus 283 ~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (498)
.| |+++.+ ++.. +.+... ...+...++.+.....+..++++.+... .+..++..++++++.+.|++++
T Consensus 244 ~G-g~~~~~-~~~~-~~~~~~-------~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~ 311 (385)
T PRK05958 244 SG-AAVLGS-ETLI-DYLINR-------ARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALG 311 (385)
T ss_pred CC-cEEEcC-HHHH-HHHHHh-------CccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC
Confidence 55 666543 2221 111000 0011111222234444555666554322 4667888899999999999876
Q ss_pred CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 363 RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+++..+ ..+++.|.+++ ..+..++.++|.++|+.+.....+....+..++|+++...++.++++++++.|+++
T Consensus 312 -~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 312 -FQLMDS--QSAIQPLIVGD--NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred -CCcCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 776543 56788888743 24567899999999998865332211223468999998778999999888888765
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=1.1e-22 Score=205.94 Aligned_cols=335 Identities=16% Similarity=0.088 Sum_probs=217.0
Q ss_pred cCCCCCcccccccC--CChHHHHHHHHHHhccCCCCCcCC---cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFVTT--WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~~~--~~~~~~~~~l~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+++.+..+. +.+|.+.+++.+++......+..+ .+...+..++++.+++++|.+. .+++++|+
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~G~ 86 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA-------ALLFSSGY 86 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC-------EEEECchH
Confidence 34444444444332 245788888888876522221111 2334455667788899888543 44445557
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh----CC
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NT 203 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~----~t 203 (498)
++++.++.++.+ .+++|+++++.|.++...++..|++++.++. +|++.|++.+++ ++
T Consensus 87 ~~~~~~l~~~~~-------------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~~~ 147 (360)
T TIGR00858 87 LANVGVISALVG-------------KGDLILSDALNHASLIDGCRLSGARVRRYRH------NDVEHLERLLEKNRGERR 147 (360)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEccccHHHHHHHHhcCCceEEecC------CCHHHHHHHHHHcccCCC
Confidence 777665555422 1468999999999999999999999887762 588999998875 46
Q ss_pred eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--cccCCCCeeEEEEcCCccCCC
Q 010897 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLV 281 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~s~hK~l~~ 281 (498)
++|++..++|++|...|+++|.++|+++ ++++++|++|+.+..+....... ..+.....+++..+.+|++..
T Consensus 148 ~~v~~~~~~~~~G~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 221 (360)
T TIGR00858 148 KLIVTDGVFSMDGDIAPLPQLVALAERY------GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS 221 (360)
T ss_pred eEEEEeCCccCCCCCcCHHHHHHHHHHc------CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc
Confidence 7888888889999999999999999999 99999999998653221101000 111112467788899998754
Q ss_pred CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010897 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
.| ||++.+. +.. +.+.. ....+...++.+.....+..++++.+.. ..+..++..++++++.+.|+++
T Consensus 222 -~g-G~~~~~~-~~~-~~~~~-------~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 222 -YG-AYVAGSQ-ALI-DYLIN-------RARTLIFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred -cC-cEEEcCH-HHH-HHHHH-------hCccceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHc
Confidence 55 7776432 221 11100 0001111122222334445555644322 2466788889999999999998
Q ss_pred CCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+ +++..+ ..+++.+.++. ..+..++.++|.++|+.+.....+....+..++|++++..++.++++++++.|
T Consensus 289 ~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 289 G-FTLMPS--CTPIVPVIIGD--NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred C-CccCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 6 776533 56788887742 24567899999999998854322211123457999999888999999888765
No 104
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=211.83 Aligned_cols=285 Identities=15% Similarity=0.127 Sum_probs=202.8
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++++++++.+|++.+ .+++|+|+++++.+++.++..+ ++++|+++.++|..|...++..|+++
T Consensus 61 ~l~~~~a~~~g~~~~-----~I~~~~Gs~e~i~~~~~~~~~~------------g~~~vli~~P~y~~y~~~~~~~G~~~ 123 (351)
T PRK01688 61 AVIENYAAYAGVKPE-----QVLVSRGADEGIELLIRAFCEP------------GKDAILYCPPTYGMYSVSAETIGVEI 123 (351)
T ss_pred HHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------------CCCEEEEcCCCHHHHHHHHHHcCCEE
Confidence 677789999998763 3999999999999888876432 12689999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~ 258 (498)
+.+|++++ +.+|++++++++ +++++|++++|+||||.+.+.++|.++++..++ +++|++|+||..|.. .+.
T Consensus 124 ~~v~~~~~-~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~----~~~vivDEay~~f~~---~~s 194 (351)
T PRK01688 124 RTVPTLDN-WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG----KAIVVADEAYIEFCP---QAS 194 (351)
T ss_pred EEeecCCC-CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEECchhhcCC---CCC
Confidence 99999765 899999999988 579999999999999999999999999876532 579999999988752 111
Q ss_pred Ccccc-CCCCeeEEEEcCCc-cCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc
Q 010897 259 LEWDF-RLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG 336 (498)
Q Consensus 259 ~~~~~-~~~~~dsi~~s~hK-~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg 336 (498)
..... ..+++ .+.-+.+| |++++.++|+++.. ++.+ +.+. .....+.+ ..+++.++...+.
T Consensus 195 ~~~~~~~~~n~-iv~rSfSK~~glaGlRiGy~i~~-~~~i-~~l~-------~~~~~~~v-------~~~~~~~a~~~L~ 257 (351)
T PRK01688 195 LAGWLAEYPHL-VILRTLSKAFALAGLRCGFTLAN-EEVI-NLLL-------KVIAPYPL-------STPVADIAAQALS 257 (351)
T ss_pred hHHHHhhCCCE-EEEecchHhhcCHHHHHhHHhCC-HHHH-HHHH-------hccCCCCC-------CHHHHHHHHHHHh
Confidence 10011 23444 34456677 44577888998853 2222 1111 11111111 1123333344443
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 337 ---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 337 ---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
.+.+++.++...+.++++.+.|++++++..+.++ ..+++.++++ +..++.++|.++|+.++.....+ ..
T Consensus 258 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps-~~nfi~~~~~-----~~~~l~~~L~~~gi~vr~~~~~~--~~ 329 (351)
T PRK01688 258 PQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS-ETNYILARFT-----ASSAVFKSLWDQGIILRDQNKQP--GL 329 (351)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHHHCCeEEEECCCcC--CC
Confidence 2345667777778899999999998767533333 6788888773 35689999999999887543221 12
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
.+++||+++ +.+++++|+++|
T Consensus 330 ~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 330 SNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred CCeEEEeCC---CHHHHHHHHHhh
Confidence 457999998 789999988876
No 105
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=1.1e-21 Score=201.83 Aligned_cols=347 Identities=16% Similarity=0.094 Sum_probs=223.5
Q ss_pred CCCCCcccccccC-----CChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 54 ~~p~~~~~~~~~~-----~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+.+.+++..+.|. ++++.+.+++.+++.... ..|....+..++++.+.+++....|.+.+. ..+++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~ii~t~G~t 106 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA---DDVVLTSGCS 106 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH---HHEEEecChH
Confidence 3344555555543 456778888888876543 234444566666666555555443433221 2388999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEE
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v 206 (498)
+|+.+++.++..+ +++|++++++|..+...++..|++++.+++++ +++.+|++.+++++.+++++|
T Consensus 107 ~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 107 QAIEICIEALANP-------------GANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred HHHHHHHHHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 9999998887432 46899999999999999999999999998853 347899999999998889999
Q ss_pred EEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--cc-CCCCeeEEEEcCCcc-C
Q 010897 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DF-RLPLVKSINVSGHKY-G 279 (498)
Q Consensus 207 ~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~-~~~~~dsi~~s~hK~-l 279 (498)
++++|+||||.+.+ +++|.++|+++ |+++++|++|+.+.. ..+.... .+ ...+ ..+..|..|. +
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~-vi~~~S~SK~~~ 244 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKL------GIPIIADEIYGHMVF--GDAPFIPMASFASIVP-VLSLGGISKRWV 244 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccc--CCCCccchhhhccCCc-EEEEeecccccC
Confidence 99999999999965 88899999999 999999999998752 1111100 11 1112 3445577885 7
Q ss_pred CCCCCeEEEEEeCCC-CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHH
Q 010897 280 LVYAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALR 355 (498)
Q Consensus 280 ~~p~g~g~~~~~~~~-~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a~~l~ 355 (498)
+++.++||++..+++ .+...+......... ... + ...+.|.++...+. ..-+++..+...++++++.
T Consensus 245 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~----~~~-~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 315 (403)
T TIGR01265 245 VPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ----RIL-G----PATIVQGALPDILENTPQEFFDGKISVLKSNAELCY 315 (403)
T ss_pred CCcceEEEEEEeCchhhhHHHHHHHHHHHhh----hhc-C----CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 888999999986542 221111110000000 000 0 12233433333332 2445667777888889999
Q ss_pred HHHhcCCCeEEeeCCCCccEEEEEecCCC---CCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHH
Q 010897 356 EGLEKTGRFEILSKDVGVPLVAFSLKDSS---AHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~ 431 (498)
+.|+.++++.+..+ .+.+++.++++... ..+..+++++| .++|+.+....... ..+++|++++. ..++++
T Consensus 316 ~~L~~~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---~~~~iRis~~~--~~~~l~ 389 (403)
T TIGR01265 316 EELKDIPGLVCPKP-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG---LPNWVRITITV--PESMLE 389 (403)
T ss_pred HHHhcCCCceecCC-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEecC--CHHHHH
Confidence 99998866765433 35677777775321 12567888885 57898775432211 24679999973 344444
Q ss_pred HHHHHHHHH
Q 010897 432 RLISHIEEV 440 (498)
Q Consensus 432 ~l~~~l~~~ 440 (498)
+.++.|.++
T Consensus 390 ~~l~~l~~~ 398 (403)
T TIGR01265 390 EACSRIKEF 398 (403)
T ss_pred HHHHHHHHH
Confidence 333333333
No 106
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.5e-22 Score=189.31 Aligned_cols=335 Identities=17% Similarity=0.144 Sum_probs=225.2
Q ss_pred ChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCC-CCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADD-KTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~-~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
+++++.+++.+++..+- ..|.++.+....+++ +|++++-+.+.. +...++.|+|.++|+-+++.++.++
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~A----VAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p----- 149 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGYAPSVGILPARRA----VAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANP----- 149 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCcCCccccHHHHHH----HHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCC-----
Confidence 45788999999988753 346666776666666 455433332211 1234999999999999999887653
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccc---cCH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEF---EDV 221 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~---~~l 221 (498)
+.+|++|.+++.-|...|.+.|++++++.+- +.+|.+|++.++.++++||.++++++|+||+|.+ +.+
T Consensus 150 --------~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL 221 (447)
T KOG0259|consen 150 --------GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHL 221 (447)
T ss_pred --------CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHH
Confidence 4599999999999999999999999999974 5569999999999999999999999999999998 679
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--cccCCCCeeEEEE--cCCccCCCCCCeEEEEEeCCCCCC
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINV--SGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~--s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
++|+++|+++ ++.++.|+.|+.++. ...... ..|. +-+-+++. -++.|+-.++++||+++.++.-.-
T Consensus 222 ~kiae~A~kl------gi~vIaDEVY~~~vf--g~~pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~~hD~~gvf 292 (447)
T KOG0259|consen 222 KKIAETAKKL------GIMVIADEVYGHTVF--GDKPFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIALHDPRGVF 292 (447)
T ss_pred HHHHHHHHHh------CCeEEehhhcceeec--CCCCccchhhcc-ccCceEeecccccccccCCceeeeEEEecccccc
Confidence 9999999999 999999999999873 211111 0121 12333443 356699899999999998875431
Q ss_pred ccccc-c--cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc
Q 010897 298 DELVF-H--INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (498)
Q Consensus 298 ~~~~~-~--~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (498)
+.... . .+++.-.. +.. ...-.|+-.-|..--.+.|.....-+..+++...+.|+++|++...-+|.+..
T Consensus 293 ~~~~~~q~~~~~~~~~~------~p~-TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~m 365 (447)
T KOG0259|consen 293 RDTKVVQGIKNFLDIIP------GPA-TIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCM 365 (447)
T ss_pred cchHHHHHHHHHHhccC------Ccc-HhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcce
Confidence 11110 0 11111100 000 00111222333444467788888888899999999999999988555555566
Q ss_pred EEEEEecCC---CCCCHHHHHHHHHhcCcEeeeecCCCCC-CCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDS---SAHTVFEISEGLRKFGWIVPAYTMPANA-ENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 375 ~v~f~~~~~---~~~~~~~l~~~L~~~G~~v~~~~~~~~~-~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+..+.+.-. +--|..+++.+|.+.--++ +.|... ...+++|+++.. ..+.++...+.|+.+
T Consensus 366 ylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~---~LPG~af~~~nw~Ri~i~~--~~~~leea~~Rik~F 430 (447)
T KOG0259|consen 366 YLMVKLNLSLFPDIEDDVDFCQKLAREESVI---CLPGQAFGLKNWLRIVITV--EEEMLEEAFSRIKEF 430 (447)
T ss_pred EEEeccchhhhccccccHHHHHHHhhhcceE---EeccccccCCCeEEEEEcc--ChHHHHHHHHHHHHH
Confidence 665554311 1234568999987655332 223332 236789999874 223444333344433
No 107
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=4.2e-22 Score=204.76 Aligned_cols=343 Identities=16% Similarity=0.084 Sum_probs=225.2
Q ss_pred Cccccccc-----CCChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHH
Q 010897 58 LNLASFVT-----TWMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (498)
Q Consensus 58 ~~~~~~~~-----~~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~ 131 (498)
++|..+.+ .++++.+.+++.+++.... ..|...++..++++++.+++.+. +.+.+. ..+++|+|+++++.
T Consensus 34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~---~~i~~t~G~~~al~ 109 (401)
T TIGR01264 34 IKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEA---DDVVLCSGCSHAIE 109 (401)
T ss_pred eecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCH---HHEEECcChHHHHH
Confidence 45555544 2456778888888777642 33555567777887777776652 333221 23889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEee
Q 010897 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (498)
Q Consensus 132 la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~ 210 (498)
+++.++.++ ++.|++++++|..+...++..|++++.++++. +++.+|++.|++.+++++++|++++
T Consensus 110 ~~~~~l~~~-------------gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 176 (401)
T TIGR01264 110 MCIAALANA-------------GQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNN 176 (401)
T ss_pred HHHHHhCCC-------------CCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcC
Confidence 888877432 46899999999999999999999999999863 3478999999999988899999999
Q ss_pred ccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC-CCe-eEEEEcCCc-cCCCCCC
Q 010897 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLV-KSINVSGHK-YGLVYAG 284 (498)
Q Consensus 211 ~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~-~~~-dsi~~s~hK-~l~~p~g 284 (498)
|+||||.+.+ +++|.++|+++ +++|++|++|..+.. ..........+ +.. .++..|..| |+.++.+
T Consensus 177 p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 177 PSNPCGSVFSRQHLEEILAVAERQ------CLPIIADEIYGDMVF--SGATFEPLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEhhhhhhcc--CCcccccHHHcCCCCcEEEEccCcccCCCccce
Confidence 9999999954 78888899999 999999999998752 11111100111 111 345667788 5899999
Q ss_pred eEEEEEeCCC-CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 285 VGWVVWRTKD-DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 285 ~g~~~~~~~~-~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
+||++..++. .+.... .....+.. ..+ + ...+.|.++...+. .+-+++..+...++++++.+.|++
T Consensus 249 iG~iv~~~~~~~~~~~~-~~~~~~~~--~~~----~---~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~ 318 (401)
T TIGR01264 249 LGWIIIHDRRGILRDIR-DGLVKLSQ--RIL----G---PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA 318 (401)
T ss_pred EEEEEecCcchhHHHHH-HHHHHHhh--ccC----C---CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999976432 111110 00000000 000 0 11233444433332 344566777777888999999999
Q ss_pred CCCeEEeeCCCCccEEEEEecC---CCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKD---SSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~---~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
++++.+..+ .+.+++.++++. +...+..+++++|. ++|+.+...... ...+++|++++. ..++++..++.
T Consensus 319 ~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f---~~~~~iRis~~~--~~~~l~~~l~r 392 (401)
T TIGR01264 319 VPGLRPVMP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCF---EYPGFFRVVLTV--PVVMMEEACSR 392 (401)
T ss_pred CCCCcccCC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhc---CCCCeEEEEEcC--CHHHHHHHHHH
Confidence 866664433 256777777642 11235678888875 789877533211 124689999974 45666655555
Q ss_pred HHHHH
Q 010897 437 IEEVL 441 (498)
Q Consensus 437 l~~~l 441 (498)
|.+++
T Consensus 393 l~~~~ 397 (401)
T TIGR01264 393 IQEFC 397 (401)
T ss_pred HHHHH
Confidence 55544
No 108
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=1.3e-22 Score=209.52 Aligned_cols=333 Identities=14% Similarity=0.052 Sum_probs=215.1
Q ss_pred CChHHHHHHHHHHhccC-C-CCC-----cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKN-Y-VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n-~-~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
+++|.+.+++...+... . ... ...+....+|+.+++++++++|.+.. .+.+ ++|++|+..++.++.+
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-----~i~~-~sgt~al~~~l~~l~~ 109 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYA-----NVQP-HSGSQANAAVYFALLK 109 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce-----eeec-CCchHHHHHHHHHhcC
Confidence 35678888876654321 1 111 11234556676678899999999751 1333 4568888877776633
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCchhHHHH---H--HHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccC
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---F--ARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGST 213 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~---~--~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t 213 (498)
+ +++|+++.++|.++.. . ....|++++.++++.+++.+|++++++++++ +|++|+++.+
T Consensus 110 ~-------------gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~-- 174 (416)
T PRK00011 110 P-------------GDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS-- 174 (416)
T ss_pred C-------------CCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--
Confidence 2 4689999999875321 1 1234577888888754588999999999975 7888776543
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCC
Q 010897 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (498)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~ 293 (498)
.+|...|+++|.++|+++ |+++++|+||+.+.. ........+. .+|+++.++||++.+|. .|+++++++
T Consensus 175 ~~~~~~~~~~I~~la~~~------~~~livD~a~~~g~~--~~g~~~~~~~--~~di~~~S~~K~l~g~~-gg~i~~~~~ 243 (416)
T PRK00011 175 AYSRPIDFKRFREIADEV------GAYLMVDMAHIAGLV--AAGVHPSPVP--HADVVTTTTHKTLRGPR-GGLILTNDE 243 (416)
T ss_pred cCCCccCHHHHHHHHHHc------CCEEEEECcchhccc--ccCccCCCCC--CCcEEEecCCcCCCCCC-ceEEEeCCH
Confidence 456778999999999999 999999999864321 1111111222 57999999999985544 567776544
Q ss_pred CCCCcccc-cccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC
Q 010897 294 DDLPDELV-FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (498)
Q Consensus 294 ~~l~~~~~-~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (498)
+.. +.+. ....+. .++.....+.++..++.....+++.++.++..++++++.+.|++.+ +++......
T Consensus 244 ~~~-~~l~~~~~~~~---------~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 312 (416)
T PRK00011 244 ELA-KKINSAVFPGI---------QGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTD 312 (416)
T ss_pred HHH-HHHHHHhCccc---------cCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCC
Confidence 332 2111 110100 0122222344444455444456678889999999999999999985 887642224
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCC---CCCCeeEEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPA---NAENVAVLRVVVRE----DFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~---~~~~~~~lRv~v~~----~~t~~~~~~l~~~l~~~l~~ 443 (498)
.+++.+.+.+ .+.+..++.+.|.++|+.+.....|. .......+|++... ..+.++++++++.|++++..
T Consensus 313 ~~~~~i~~~~-~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 313 NHLVLVDLRS-KGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CeEEEEeCcc-cCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 5777777742 24567789999999999886432221 11123458986533 35688999999999887654
No 109
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=4.3e-22 Score=203.67 Aligned_cols=340 Identities=14% Similarity=0.135 Sum_probs=225.0
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++..+.|.. +++.+.+++.+++..+...|...++..++++++.+++.+..|++.+.+ ..+++|+|+++|+.+++.+
T Consensus 31 i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--~~I~~t~G~~~al~~~~~~ 108 (387)
T PRK07683 31 ISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPE--SEIIVTIGASEAIDIAFRT 108 (387)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHHH
Confidence 3344444433 346788888888876655565566788899998888887777754321 1389999999999888877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
+..+ ++.|+++.++|..+..+++..|++++.++++++++.+|++++++.+.+++++|++++|+||||
T Consensus 109 l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG 175 (387)
T PRK07683 109 ILEP-------------GTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTG 175 (387)
T ss_pred hCCC-------------CCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 5332 468999999999999999999999999999866688899999999988899999999999999
Q ss_pred cccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-ccc-CCCCeeEEEEcCCccCC-CCCCeEEEEE
Q 010897 217 EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (498)
Q Consensus 217 ~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~ 290 (498)
.+.+ +++|.++|+++ ++++++|++|+.+.. ..+... ..+ ..+.-..+..+..|.++ ++.++||++.
T Consensus 176 ~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 176 VTLSKEELQDIADVLKDK------NIFVLSDEIYSELVY--EQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred cCCCHHHHHHHHHHHHHc------CeEEEEeccccccee--CCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 9854 78889999999 999999999998752 111111 111 12222455567778765 8888999985
Q ss_pred eCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 291 ~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
.. +.+ +.+.....|... + ...+.|.++...+ +...+++..++..++++++.+.|.+.+ +.+..
T Consensus 248 ~~-~l~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 312 (387)
T PRK07683 248 PS-YLA-KHILKVHQYNVT--------C----ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEK 312 (387)
T ss_pred CH-HHH-HHHHHHHHhccC--------C----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccC
Confidence 43 211 111110111100 1 1112344444333 334455666777788889999998875 66554
Q ss_pred CCCCccEEEEEecCCCCCCHHHHHHH-HHhcCcEeeeec-CCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 369 KDVGVPLVAFSLKDSSAHTVFEISEG-LRKFGWIVPAYT-MPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~-L~~~G~~v~~~~-~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+ ..+++.|...+....+..+++.+ |.++|+.+.... +. ..+..++|++++. +.++++..++.|.+++
T Consensus 313 ~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~--~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l 381 (387)
T PRK07683 313 P--TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS--EYGEGYVRLSYAY--SIETLKEGLDRLEAFL 381 (387)
T ss_pred C--CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC--CCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 3 35555553222223566678766 567898774332 22 2335789999974 4555554444444443
No 110
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.92 E-value=5.8e-22 Score=191.80 Aligned_cols=386 Identities=15% Similarity=0.127 Sum_probs=271.4
Q ss_pred CCCCCCCHHHHHHHHHHhhhccC---CCCCcccccccCCChHHHHHHH---HHHhccCCCCCc-CCcchHHHHHHHHHHH
Q 010897 32 MPDNSMPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDKLV---MASINKNYVDMD-EYPVTTELQNRCVNMI 104 (498)
Q Consensus 32 ~p~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~l---~~~~~~n~~~~~-~~~~~~~le~~~~~~l 104 (498)
.|..+.+.-++++.+..+-..+- +..+.|+| +|.-..|.+.+.. .++.+..++.++ ..++..++-.++.+||
T Consensus 40 ~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGS-CTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L 118 (496)
T COG1003 40 PPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGS-CTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWL 118 (496)
T ss_pred CCCccccHHHHHHHHHHHHhcccccccCccCCcc-cccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 33445678888888876543321 11122333 2222234333322 233444555544 3457888999999999
Q ss_pred HHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec
Q 010897 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (498)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~ 184 (498)
+++.|++. ...--+.|+++-+.++++++.-. .. .|-. .+..+++|+.+|..--..|.+.|.+|+.|+++
T Consensus 119 ~~ITG~Da------vsLQP~AGAqGE~aGll~Ir~YH-e~---rG~~-~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~ 187 (496)
T COG1003 119 KEITGMDA------VSLQPNAGAQGEYAGLLAIRAYH-ES---RGEG-HRNICLIPDSAHGTNPASAAMAGFKVVVVKCD 187 (496)
T ss_pred HHhcCCce------eeccCCCCcchhhHHHHHHHHHH-HH---cCCC-cCcEEEeeccccCCChhhHhhcCceEEEEecC
Confidence 99999984 34445578888888888876543 22 2221 46799999999999999999999999999999
Q ss_pred CCccccCHHHHHHHhhhCCeEEEEeeccCCccccc-CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc
Q 010897 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~ 263 (498)
++ +.+|+++|++++.+++.++.+|+|||. |.++ ++.+|+++.+++ |..|..|||---.......| .|+
T Consensus 188 ~~-G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~------Gg~vY~DGANlNA~vG~~rP---Gd~ 256 (496)
T COG1003 188 EN-GNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA------GGQVYYDGANLNAIVGLARP---GDM 256 (496)
T ss_pred CC-CCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc------CCEEEecCcchhhhhccccc---ccc
Confidence 86 889999999999999999999999986 9995 899999999999 99999999985544333322 233
Q ss_pred CCCCeeEEEEcCCccCCCC-----CCeEEEEEeCCCCCCcccccc------cCccCC-CCC-C----ccccCCCchHHHH
Q 010897 264 RLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH------INYLGS-DQP-T----FTLNFSKGSSQII 326 (498)
Q Consensus 264 ~~~~~dsi~~s~hK~l~~p-----~g~g~~~~~~~~~l~~~~~~~------~~yl~~-~~~-~----~~l~~sr~~~~~~ 326 (498)
++|++-++.||.++.| +|.|-+.++. .|...++.. ..|... ... . ....|+- ....
T Consensus 257 ---G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~--~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~--~il~ 329 (496)
T COG1003 257 ---GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKA--HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA--SILP 329 (496)
T ss_pred ---ccceEEeecccccccCCCCCCCCCCceehHh--hccccCCCCcccCCCccccccCCCCccceeeccccCcc--hHHH
Confidence 6899999999997655 5567777664 232222221 111111 111 1 1111222 3456
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC--CccEEEEEec---CCCCCCHHHHHHHHHhcCcE
Q 010897 327 AQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVPLVAFSLK---DSSAHTVFEISEGLRKFGWI 401 (498)
Q Consensus 327 a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~~v~f~~~---~~~~~~~~~l~~~L~~~G~~ 401 (498)
..|+.++.+|.+|+++..+...-+++|+..+|+.. +++...+. ...-+.+..+ ...+++..+++++|.+.|+.
T Consensus 330 ~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfH 407 (496)
T COG1003 330 IAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFH 407 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCC
Confidence 78899999999999999999999999999999873 66654432 2344444443 23468899999999999998
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCcccc
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRV 451 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~~ 451 (498)
.++..+|... ...|-|--++..+.+++|+|+++|..+.++.++.+...
T Consensus 408 aPT~~FPliV--~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~~~~ 455 (496)
T COG1003 408 APTMYFPLIV--AGTLMIEPTESESKEELDRFIDAMIAIREEADAVPAGP 455 (496)
T ss_pred CCcccCcccc--ccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 8776666322 34467777778899999999999999999999987443
No 111
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=3.5e-22 Score=201.63 Aligned_cols=327 Identities=16% Similarity=0.056 Sum_probs=216.7
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++++.+++.+.... ...|....+...+++.+.+++.+..|++.+.+ ..+++|+|+++++.+++.++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~Iiit~Gs~~ai~~~~~~~~~~------ 83 (350)
T TIGR03537 13 PTPPFIRKALIDAVPE-VSQYPSALGTKALREAISGWFERRFGVKLDPD--AQVLPSAGSKEAIFHFPLVFIDP------ 83 (350)
T ss_pred CCCHHHHHHHHHHHhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEcCChHHHHHHHHHHHcCC------
Confidence 3357788888776543 33455555778899999999988888764321 13899999999998888776432
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VK 222 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~ 222 (498)
| .+++.|++++++|..+..+++..|++++.++++ ++++.+|++++++++.+++++|++++|+||||.+.+ ++
T Consensus 84 --g--~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~ 159 (350)
T TIGR03537 84 --E--EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLK 159 (350)
T ss_pred --C--CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHH
Confidence 1 012589999999999999999999999999996 445789999999999889999999999999999987 88
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-cccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~ 300 (498)
+|.++|+++ ++++++|++|+.+.. ..+... ..+..++ ..+..+.+|.+ .++.++||++. ++... ..+
T Consensus 160 ~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~-~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~ 228 (350)
T TIGR03537 160 ETIAMCREH------GIILCSDECYTEIYF--GEPPHSALEVGIEN-VLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFL 228 (350)
T ss_pred HHHHHHHHc------CcEEEEecccccccc--CCCCCchhhcCcCC-EEEEeecccccCCccccceeeec-CHHHH-HHH
Confidence 888999999 999999999987642 111100 0112222 24455778865 67778998873 32221 111
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEE
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (498)
..... .+++ +. ..+.+.++...+.. +..++..+++.++++.+.+.|++.+ +++..+. +..++.+.
T Consensus 229 ~~~~~-------~~~~--~~---~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~-g~~~~~~~ 294 (350)
T TIGR03537 229 RKLRA-------NFGV--AS---PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPD-ATFYLWVK 294 (350)
T ss_pred HHHHH-------hhcc--CC---CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-eEEEEEEE
Confidence 11000 0111 11 11223333333332 3345666777778888899998875 7655332 33345556
Q ss_pred ecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHH
Q 010897 380 LKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 380 ~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
+++ ..+..+++++|.++|+.+....... .....++|+++. .+.+++++.++.
T Consensus 295 ~~~--~~~~~~l~~~L~~~gv~v~~g~~f~-~~~~~~~Ri~~~--~~~~~~~~~l~~ 346 (350)
T TIGR03537 295 VPS--GIDAKDYALRLLENGIVVAPGENFG-SGEEGYVRVALV--PTLEECEEALRL 346 (350)
T ss_pred CCC--CCCHHHHHHHHHHCCEEEcCchhhC-CCCCCEEEEEec--CCHHHHHHHHHH
Confidence 643 3577899999999998875432211 123467999985 245555544433
No 112
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.92 E-value=6e-22 Score=207.88 Aligned_cols=332 Identities=13% Similarity=0.040 Sum_probs=216.8
Q ss_pred HHHHHHHHHHhcc---CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH-HHHHHHH
Q 010897 70 PECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQKR 145 (498)
Q Consensus 70 ~~~~~~l~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~-~~~~~~~ 145 (498)
..+.+.+.++++. ....|....+..++++.+.+++.+..|++.+. ..+++|+|+++++.+++.++. ++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~~----- 162 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP---SDIFLTDGASSGIKLLLQLLIGDP----- 162 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHHHHHHhccCC-----
Confidence 3444555555543 23346666688899999999998887876543 249999999999999988875 22
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhh------CCeEEEEeeccCCcccc
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~ 218 (498)
+++|+++.++|..+...++..|++++.|++++ ++|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 163 --------gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 163 --------SDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred --------CCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 47899999999999999999999999999974 4578999999999975 78899999999999999
Q ss_pred cC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCC-CC-c-----cccCCC---Ce-eEEEEcCCcc--CCCC
Q 010897 219 ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DL-E-----WDFRLP---LV-KSINVSGHKY--GLVY 282 (498)
Q Consensus 219 ~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~-~~-~-----~~~~~~---~~-dsi~~s~hK~--l~~p 282 (498)
.+ +++|+++|+++ +++|++|++|+.+.. ... .. . ..+.-. .. .++.-|..|. ++++
T Consensus 235 ~s~e~~~~i~~~a~~~------~~~iI~De~Y~~l~~--~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G 306 (481)
T PTZ00377 235 LTRDVMEEIIKFCYEK------GIVLMADEVYQENIY--DGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG 306 (481)
T ss_pred CCHHHHHHHHHHHHHC------CCEEEEehhhHhhcc--CCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCc
Confidence 77 78889999999 999999999998642 110 10 0 011000 11 2334477884 4478
Q ss_pred CCeEEEEEe--CCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc-----H---HHHHHHH----HHHH
Q 010897 283 AGVGWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----F---EGYKNIM----ENCM 348 (498)
Q Consensus 283 ~g~g~~~~~--~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-----~---~g~~~~~----~~~~ 348 (498)
.++||++.. +++.+ +.+.. +.. . .+ + ...++|.++...+. . +.+.+.+ ++..
T Consensus 307 lRiG~~~~~~~p~~li-~~l~~----~~~---~-~~-~----~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (481)
T PTZ00377 307 RRGGYFELTNIPPEVR-EQIYK----LAS---I-NL-C----SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLK 372 (481)
T ss_pred CceEEEEEeCCCHHHH-HHHHH----Hhh---e-ec-C----CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 999999863 22221 21110 000 0 00 1 12345555555542 1 1122222 3346
Q ss_pred HHHHHHHHHHhcCCCeEEeeCCCCccEEEE-EecCCCC---------C-CHHHHH-HHHHhcCcEeeeecCCCCCCCeeE
Q 010897 349 GNARALREGLEKTGRFEILSKDVGVPLVAF-SLKDSSA---------H-TVFEIS-EGLRKFGWIVPAYTMPANAENVAV 416 (498)
Q Consensus 349 ~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~~---------~-~~~~l~-~~L~~~G~~v~~~~~~~~~~~~~~ 416 (498)
+.++.+.+.|++++++.+..+ ..++..| +++.+.. . +...++ ..|.++|+.+.....-....+..+
T Consensus 373 ~rr~~l~~~L~~~~g~~~~~p--~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~ 450 (481)
T PTZ00377 373 RRAELLTDELNKIEGVSCQPV--EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYH 450 (481)
T ss_pred HHHHHHHHHHhcCCCcEeecC--CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCE
Confidence 778888999999877887644 3444444 4431111 1 123344 556677987643321111123468
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 417 LRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 417 lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+|+++. .+.+++++.++.|+++++.
T Consensus 451 ~Rls~~--~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 451 FRITIL--PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred EEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 999997 4667888888888877764
No 113
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=1.3e-22 Score=205.80 Aligned_cols=310 Identities=17% Similarity=0.094 Sum_probs=213.8
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+++|.+.+++.+++..... |.. +. ..++++.+++.+|++++ .+++|+|+++++.+++.++.++
T Consensus 56 ~~~~~~~~a~~~~~~~~~~-Y~~-~~----~~~Lr~aia~~~~v~~e-----~I~it~Gs~~ai~~~~~~l~~~------ 118 (370)
T PRK09105 56 GPSPAARDAAARSAALSGR-YDL-EL----EDDLRTLFAAQEGLPAD-----HVMAYAGSSEPLNYAVLAFTSP------ 118 (370)
T ss_pred CCCHHHHHHHHHHHHHhcC-CCC-ch----HHHHHHHHHHHhCcChh-----hEEEcCChHHHHHHHHHHHcCC------
Confidence 4567788888776643222 211 12 23455668888898753 3999999999999988877542
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|++++++|..+...++..|++++.++++++ +.+|++.+++. .+++++|++++|+||||.+.+.++|.+
T Consensus 119 -------gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 119 -------TAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD-GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 468999999999999999999999999999764 78999999877 567899999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEE-EcCCccC-CCCCCeEEEEEeCCCCCCccccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN-VSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~-~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
+++.+++ ++++++|++|..+.. .+.. .++....-+++. .|..|.+ .++.++||++... +.+ +.+..
T Consensus 190 l~~~~~~----~~~lIvDEaY~~f~~---~~s~-~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~i-~~l~~-- 257 (370)
T PRK09105 190 LLANKPA----GSVLLVDEAYIHFSD---APSV-VDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP-DLL-AKLAR-- 257 (370)
T ss_pred HHHhCCC----CcEEEEECchHHhcc---Ccch-HHHHhhCCCEEEEecccHhhcCCccceeeeecCH-HHH-HHHHh--
Confidence 9875422 899999999976531 1110 111001123333 4566755 5778899998532 221 11110
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
+ . . .+ .....+.+++..+..+. +++..++..++++++.+.|++.+ +++..+ ..+++.++++
T Consensus 258 -~-~----~----~~---~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~--~~~f~~~~~~-- 319 (370)
T PRK09105 258 -F-G----H----NP---LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS--QANCFMVDVK-- 319 (370)
T ss_pred -c-C----C----CC---cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC--CCcEEEEeCC--
Confidence 0 0 0 11 22334555555554433 45666777789999999999875 776543 4667666553
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+..++++.|.++|+.+... ++ ...+++|++++ +.+++++|+++|+.++
T Consensus 320 --~~~~~l~~~L~~~gI~v~~~-~~---~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 320 --RPAKAVADAMAKQGVFIGRS-WP---IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred --CCHHHHHHHHHHCCcEEecC-CC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 35679999999999987322 21 22468999987 6788999999988765
No 114
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.3e-22 Score=204.21 Aligned_cols=324 Identities=11% Similarity=0.037 Sum_probs=212.4
Q ss_pred hHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 69 EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
++.+.+.+.+.+... ...|....+..++++.+.+++.+.+|.+.+.+ ..+++|+|+++++.+++.++.++
T Consensus 50 p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~--~~i~vt~G~~~al~~~~~~~~~~------- 120 (394)
T PRK05942 50 PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPD--SEALPLLGSKEGLTHLALAYVNP------- 120 (394)
T ss_pred CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCC--CeEEEccChHHHHHHHHHHhCCC-------
Confidence 344555555444332 23444445677899999999988878754321 13778999999999888776432
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHH
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~ 223 (498)
+++|++++++|..+...+...|++++.++++. ++|.+|++++++.+.+++++|++++|+||||.+.+ +++
T Consensus 121 ------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~ 194 (394)
T PRK05942 121 ------GDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEE 194 (394)
T ss_pred ------CCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHH
Confidence 47899999999999888899999999999973 45789999999999889999999999999999977 778
Q ss_pred HHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcc
Q 010897 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~ 299 (498)
|.++|+++ ++++++|++|+.+.. ...... ..+ .......+..+..|.+ +++.++||++.. ++.+ +.
T Consensus 195 i~~~a~~~------~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~-~~ 264 (394)
T PRK05942 195 IVAFARKY------EIMLVHDLCYAELAF--DGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHII-QG 264 (394)
T ss_pred HHHHHHHc------CeEEEEeccchhhcc--CCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHH-HH
Confidence 88899999 999999999987652 111110 111 1123334455677855 688889999853 2221 21
Q ss_pred cccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc-EE
Q 010897 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LV 376 (498)
Q Consensus 300 ~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v 376 (498)
+.....+. . .+.+ .+.|.++...+ ..+..++..+++.++++++.+.|++.+ +.+..+ ..+ ++
T Consensus 265 l~~~~~~~-----~----~~~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~--~~~~f~ 329 (394)
T PRK05942 265 LRTLKTNL-----D----YGIF---SALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELG-WNIPPT--KATMYL 329 (394)
T ss_pred HHHHHhhc-----c----cCCC---HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCC--CeeeEE
Confidence 11100000 0 1111 12233333333 244556677777888889999998875 776543 345 55
Q ss_pred EEEecCCCCCCHHHHHHH-HHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 377 AFSLKDSSAHTVFEISEG-LRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~-L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.++++. ..+..+++.+ |.++|+.+...... ...+..++|+++.. +.+++.+.|+.+
T Consensus 330 ~~~~~~--~~~~~~~~~~~l~~~gV~v~~g~~f-~~~~~~~iRis~~~-----~~~~l~~~l~~l 386 (394)
T PRK05942 330 WVPCPV--GMGSTDFALNVLQKTGVVVTPGNAF-GEGGEGYVRISLIA-----DCDRLGEALDRL 386 (394)
T ss_pred EEECCC--CCCHHHHHHHHHHHCCEEEeCChhh-CcCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 567643 3566677765 45789887443211 11235689999962 345555555544
No 115
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=2.3e-22 Score=206.77 Aligned_cols=331 Identities=14% Similarity=0.070 Sum_probs=219.3
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
....+|.+.+++.+.+++.......++ +......++.+.+++++|.+. .+++++|++||..++..+...
T Consensus 57 gl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~-------~l~~~sG~~an~~ai~~l~~~- 128 (402)
T TIGR01821 57 GMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES-------ALVFTSGYVANDATLATLAKI- 128 (402)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe-------EEEECchHHHHHHHHHHhhCC-
Confidence 445678899999888877443222111 234445567777999998653 677777899998888766431
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGE 217 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG~ 217 (498)
..+..|+.+...|.++...++..|+++..++. .|+++++++++ +++++|+++.+++++|.
T Consensus 129 ----------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~ 192 (402)
T TIGR01821 129 ----------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGD 192 (402)
T ss_pred ----------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCC
Confidence 01346777777999998888888887765542 36677777775 25789999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccc-cccCCCCccccCC-CCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~-~~~~~~~~~~~~~-~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
+.|+++|.++|+++ ++++++|+||+.+.. +...... ...++ ..+|.+..+..|.++.+ | ||++.+ ++.
T Consensus 193 ~~~l~~i~~l~~~~------~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~div~~t~sKa~g~~-G-G~i~~~-~~~ 262 (402)
T TIGR01821 193 IAPIEEICDLADKY------GALTYLDEVHAVGLYGPRGGGIA-ERDGLMHRIDIIEGTLAKAFGVV-G-GYIAAS-RKL 262 (402)
T ss_pred ccCHHHHHHHHHHc------CCEEEEeCcccccccCCCCCccc-hhccCCCCCeEEEEechhhhccC-C-ceeecC-HHH
Confidence 99999999999999 999999999984321 2111000 01121 34688877889987543 3 565533 221
Q ss_pred CCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccE
Q 010897 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPL 375 (498)
Q Consensus 296 l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (498)
. +.+. .....+...++.+.....+..++++.+... ....++..++++++.+.|++++ ++++.+ ..++
T Consensus 263 ~-~~l~-------~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~i 329 (402)
T TIGR01821 263 I-DAIR-------SYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALG-IPVIPN--PSHI 329 (402)
T ss_pred H-HHHH-------HhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcC-CCcCCC--CCCE
Confidence 1 1111 001111111233333445555666554333 3445566789999999999885 776643 4677
Q ss_pred EEEEecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 376 VAFSLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.+.+.. ..+..++.++|.+ +|+.++....|....+..++|++++..+|.++++++++.|+++++++
T Consensus 330 ~~i~~~~--~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 330 VPVIIGD--AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEEEeCC--HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 7776632 1235678899864 59888766555444455789999998999999999999999988754
No 116
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=2.1e-22 Score=204.15 Aligned_cols=310 Identities=17% Similarity=0.114 Sum_probs=209.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceee-ecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~sea~~la~~a~~~~~~~~~ 145 (498)
+++|.+.+.+.+.+..... |.. +.. .++++.+++++|++.+ ..++ |+|+++++.+++.++.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~-y~~-~~~----~~lr~~ia~~~~~~~~-----~i~~~~~Ga~~~i~~~~~~~~~~----- 110 (361)
T PRK00950 47 GPSPKAVEAIEKELSKIHR-YPE-PDA----PELREALSKYTGVPVE-----NIIVGGDGMDEVIDTLMRTFIDP----- 110 (361)
T ss_pred CCCHHHHHHHHHHHHhhcC-CCC-CCH----HHHHHHHHHHhCCCHH-----HEEEeCCCHHHHHHHHHHHhcCC-----
Confidence 4567777777766554222 221 222 3556668888888652 2666 678888887776665321
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
+++|+++.+.|..+...++..|++++.++.+++ +.+|++++++.+++++++|++++|+||||.+.|+++|.
T Consensus 111 --------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~ 181 (361)
T PRK00950 111 --------GDEVIIPTPTFSYYEISAKAHGAKPVYAKREED-FSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIR 181 (361)
T ss_pred --------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 468999999999999999999999999997654 78999999999988899999999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
++|+++ ++++++|++|+++.. ....... ..+++ .+..+..|.++ ++.++||++..+ +.. ..+..
T Consensus 182 ~l~~~~------~~~li~De~y~~~~~----~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~~~~~-~~~-~~~~~- 247 (361)
T PRK00950 182 KILEST------DALVFVDEAYVEFAE----YDYTPLALEYDNL-IIGRTFSKVFGLAGLRIGYGFVPE-WLI-DYYMR- 247 (361)
T ss_pred HHHHHC------CcEEEEECchhhhCc----cchHHHHHhcCCE-EEEEeehHhhcCchhhcchhcCCH-HHH-HHHHH-
Confidence 999999 999999999987641 1111011 12233 34556778664 667789987532 111 11110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
....+. ...+.+.+++..+...+ +++..++..++++++.+.|. +.+.. +..+++.++++
T Consensus 248 ------~~~~~~-------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~--~~~~~i~~~~~- 307 (361)
T PRK00950 248 ------AKTPFS-------LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYP--SEANFVLVDVT- 307 (361)
T ss_pred ------hcCCCC-------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECC--CcceEEEEECC-
Confidence 000111 12334555555554433 45666666667777766664 44442 25677777773
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
..+..+++++|.++|+.+...... ...+..++|++++ +.++++++++.|++++
T Consensus 308 --~~~~~~~~~~l~~~gv~v~~~~~f-~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 308 --PMTAKEFCEELLKRGVIVRDCTSF-RGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred --CCCHHHHHHHHHHCCEEEeeCCcc-CCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 357889999999999887543211 1234568999987 7789999999988765
No 117
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3.4e-22 Score=203.45 Aligned_cols=322 Identities=13% Similarity=0.077 Sum_probs=220.5
Q ss_pred CChHHHHHHHHHHhccCC--CCCcCCcchHHHHHHHHHHHHHHcC--CCCCCCCCcceeeecChhHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNY--VDMDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~--~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~ 142 (498)
++++.+.+.+.++++.+. ..|. .++..++++.+.+++.+..| ++.+. ..+++|+|+++++.+++.+....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~---~~I~it~Ga~~al~~~~~~~~~~-- 114 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITP---ANISVGNGSDELIRSLLIATCLG-- 114 (374)
T ss_pred CCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCH---HHEEEcCChHHHHHHHHHHHcCC--
Confidence 566788888888776532 2332 25667787777777766542 32221 23889999999998776665332
Q ss_pred HHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh----CCeEEEEeeccCCcccc
Q 010897 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEF 218 (498)
Q Consensus 143 ~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~----~t~~v~~~~~~t~tG~~ 218 (498)
+++.|++++++|..+..+++..|++++.++++++++.+|+++|++++.. ++++|++++|+||||..
T Consensus 115 ----------g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~ 184 (374)
T PRK02610 115 ----------GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNP 184 (374)
T ss_pred ----------CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCC
Confidence 1237999999999999999999999999998765689999999999873 78999999999999999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCC
Q 010897 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~ 297 (498)
.+.+++.++++-. + +++|++|++|..+.. .+........+++. +..|..|.+ +++.++||++. +++.+
T Consensus 185 ~s~~~l~~l~~~~-~----~~~iI~De~Y~~~~~---~~~~~~~~~~~~~i-vi~SfSK~~g~~GlRiG~~v~-~~~l~- 253 (374)
T PRK02610 185 LTAAELEWLRSLP-E----DILVVIDEAYFEFSQ---TTLVGELAQHPNWV-ILRTFSKAFRLAAHRVGYAIG-HPELI- 253 (374)
T ss_pred CCHHHHHHHHhcc-C----CcEEEEeccccccCc---cchHHHHhcCCCEE-EEEecchhccCcccceeeeec-CHHHH-
Confidence 9988888776432 1 899999999988641 11111011223444 456778876 78999999985 32222
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEE
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV 376 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (498)
+.+... . ..+. ...+.|.++...++. +.+.+.+++..+.++.+.+.|++++++.+. +++.+++
T Consensus 254 ~~l~~~---~----~~~~-------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--p~~g~f~ 317 (374)
T PRK02610 254 AVLEKV---R----LPYN-------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW--PSAANFL 317 (374)
T ss_pred HHHHHh---c----CCCC-------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC--CCcceEE
Confidence 211110 0 0111 122345555555543 445556666666778888899888777754 3356777
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 377 AFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.++++. ..+..++++.|.++|+.+... .+++|++++ +.++++++++.|+++++.+
T Consensus 318 ~~~l~~--~~~~~~~~~~l~~~gi~v~~~--------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 318 YLRLSQ--DAALAALHQALKAQGTLVRHT--------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EEeCCC--CCCHHHHHHHHHHCCEEEEeC--------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 777753 357789999999999887431 246999987 4567888888888776543
No 118
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1e-21 Score=202.07 Aligned_cols=336 Identities=13% Similarity=0.015 Sum_probs=213.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHc--CCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF--NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
+++.+.+.+.+.+.. ...|....+..++++.+.+++.... ++++ ..+++|+|+++++.+++.++..+
T Consensus 50 ~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~~----- 118 (404)
T PRK09265 50 APDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-----DDIYIGNGVSELIVMAMQALLNN----- 118 (404)
T ss_pred CCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-----ccEEEeCChHHHHHHHHHHhCCC-----
Confidence 456666666665543 2334444455677777666664322 3333 23889999999998888776432
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---H
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---V 221 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l 221 (498)
+++|++++++|..+..+++..|+.++.++++. +++.+|++++++.+++++++|++++|+||||.+.+ +
T Consensus 119 --------gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~ 190 (404)
T PRK09265 119 --------GDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELL 190 (404)
T ss_pred --------CCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHH
Confidence 46899999999999999999999999998863 35789999999999888999999999999999988 8
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEE-EcCCccC-CCCCCeEEEEEeCCCCCCc
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSIN-VSGHKYG-LVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~-~s~hK~l-~~p~g~g~~~~~~~~~l~~ 298 (498)
++|.++|+++ +++|++|++|+.+.. .......... .+...++. -+..|.+ +++.++||++...+..+.+
T Consensus 191 ~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~ 262 (404)
T PRK09265 191 EEIVEIARQH------NLIIFADEIYDKILY--DGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAK 262 (404)
T ss_pred HHHHHHHHHC------CCEEEEehhhhhccC--CCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHH
Confidence 8899999999 999999999998642 1111000001 12222333 4556765 7889999999753322111
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHH---HHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNI---MENCMGNARALREGLEKTGRFEILSKDVGVP 374 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~---~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (498)
.+......+.. ..+ ....+.|.++...++. +.+.+. .++..+.++.+.+.|++++++++..+. +..
T Consensus 263 ~~~~~~~~~~~--~~~-------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~-~g~ 332 (404)
T PRK09265 263 GYIEGLDMLAS--MRL-------CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPK-GAL 332 (404)
T ss_pred HHHHHHHHHhc--ccc-------CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC-cce
Confidence 11000000100 000 0122344444544432 222222 235666788888999888767765442 344
Q ss_pred EEEEEecCCC--CC-CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSS--AH-TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 375 ~v~f~~~~~~--~~-~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
++.+++++.. .. +...+.+.|.++|+.+...... ...+..++|+++. .+.++++..++.|+++++.
T Consensus 333 ~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F-~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 333 YAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGF-NWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred EEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhh-CCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 5555775321 11 3345778889999877543211 1123468999995 4677888777777777654
No 119
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=2.7e-22 Score=206.72 Aligned_cols=333 Identities=11% Similarity=0.057 Sum_probs=213.4
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCc---CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 64 VTTWMEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 64 ~~~~~~~~~~~~l~~~~~~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
.+..++|.+.+++.++++....... ...+......++.+.+++++|.+. .+++++|++|+..++..+...
T Consensus 57 l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~-------~i~~~sG~~a~~~~i~~l~~~ 129 (410)
T PRK13392 57 LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES-------ALLFTSGYVSNDAALSTLGKL 129 (410)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHHhcC
Confidence 3555678899998888765322111 111222234467777999999753 555556678887777654321
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCcc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTG 216 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG 216 (498)
..++.|+++...|.++...++..|++++.++.+ |++.+++.+. ++|++|++++++|++|
T Consensus 130 -----------~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG 192 (410)
T PRK13392 130 -----------LPGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMDG 192 (410)
T ss_pred -----------CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCc
Confidence 013578888889999988889999988776532 3444444443 5789999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
.+.|+++|.++|+++ ++++++|+||+.+.............+ .+.+|.+..+.+|+++.+ | ||++. +++.
T Consensus 193 ~~~~l~~i~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-G-G~~~~-~~~~ 263 (410)
T PRK13392 193 DIAPIEAICDLADRY------NALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-G-GYIAA-SADL 263 (410)
T ss_pred ccccHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-c-chhhc-CHHH
Confidence 999999999999999 999999999984331100000000011 235677878999987543 3 66653 3222
Q ss_pred CCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccE
Q 010897 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPL 375 (498)
Q Consensus 296 l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (498)
......+...| ....+.+.....+..++|+.+.. .....+++.++++++.+.|++++ +++..+ ..++
T Consensus 264 ~~~l~~~~~~~--------~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~ 330 (410)
T PRK13392 264 IDFVRSFAPGF--------IFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANG-IPVMPS--PSHI 330 (410)
T ss_pred HHHHHHhCcch--------hccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC-CCCCCC--CCCE
Confidence 11100111111 11122222334445555654432 23445677888999999999885 776533 4677
Q ss_pred EEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 376 VAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.+.+.. ..+..+++++|. ++|+.+.....|....+..++|++++...|.++++++++.|+++++++
T Consensus 331 ~~i~~~~--~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 331 VPVMVGD--PTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EEEEeCC--HHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 7666532 224568999986 679988765544433455789999988889999999999999887643
No 120
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.91 E-value=1.4e-21 Score=199.73 Aligned_cols=323 Identities=15% Similarity=0.043 Sum_probs=214.5
Q ss_pred cccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 59 NLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 59 ~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
++....+. .+++.+.+.+.+++... ...|....+..++++.+.+++++.+|.+.+.. ..+++|+|+++++.+++.+
T Consensus 33 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--~~vi~t~G~~~~l~~~~~~ 110 (383)
T TIGR03540 33 SLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPE--TEVLSLIGSKEGIAHIPLA 110 (383)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--CeEEECCCcHHHHHHHHHH
Confidence 33443333 34566778877766432 23454455678899999999988888764321 1377889999999888877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
+.++ ++.|+++.++|..+...++.+|++++.+|+++ +++.+|++++++.+.+++++|++++|+|||
T Consensus 111 ~~~~-------------gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPt 177 (383)
T TIGR03540 111 FVNP-------------GDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPT 177 (383)
T ss_pred hCCC-------------CCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCc
Confidence 6432 47899999999999999999999999999974 357789999999998889999999999999
Q ss_pred ccccC---HHHHHHHHHHhhcccCCCceEEEecCccccccc-ccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEE
Q 010897 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP-FLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVV 289 (498)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~-~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~ 289 (498)
|.+.+ +++|.++|+++ ++++++|++|+.+... ...+... .+ ......++..+..|.+ .++.++||++
T Consensus 178 G~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~l~~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i 250 (383)
T TIGR03540 178 GAVAPLKFFKELVEFAKEY------NIIVCHDNAYSEITFDGYKAPSFL-EVDGAKDVGIEFHSLSKTYNMTGWRIGMAV 250 (383)
T ss_pred CccCCHHHHHHHHHHHHHc------CEEEEEecchhhhccCCCCCcCcc-cCCCcccCEEEEEecccccCCccceeeEEe
Confidence 99977 68888899999 9999999999876420 0001110 11 1112334556677876 5677799997
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (498)
.. ++.+ ..+.....+... + ...+.|.++...+ +.+..++..+...++++.+.+.|++.+ +.+.
T Consensus 251 ~~-~~l~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~ 315 (383)
T TIGR03540 251 GN-ADLI-AGLGKVKTNVDS--------G----VFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVE 315 (383)
T ss_pred CC-HHHH-HHHHHHHHhccc--------C----CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEec
Confidence 43 3221 111100000000 1 1112334444334 234455667777788999999999985 7776
Q ss_pred eCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
.+. +..++.+++++ +++..+++++|. ++|+.+....... ..+.+++|+++.
T Consensus 316 ~~~-~~~~~~~~l~~--~~~~~~~~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~ 367 (383)
T TIGR03540 316 KPK-ATFYVWVPVPE--GYTSAEFAARLLEETGVVVTPGVGFG-EYGEGYIRISLT 367 (383)
T ss_pred CCC-cceEEEEECCC--CCCHHHHHHHHHHHCCEEEecchhhC-ccCCCeEEEEec
Confidence 443 33345566643 467789999875 6798876433211 123468999996
No 121
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=2.4e-22 Score=204.21 Aligned_cols=316 Identities=16% Similarity=0.102 Sum_probs=218.9
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
.+++.+.+++.+.+.. ...|... ... ++++.+++++|.+.+ .+++|+|+++++.+.+.++.++
T Consensus 45 ~~~~~~~~a~~~~~~~-~~~y~~~-~~~----~lr~~ia~~~~~~~~-----~i~~t~G~~~~l~~~~~~l~~~------ 107 (367)
T PRK02731 45 GPSPKAIEAIRAAADE-LHRYPDG-SGF----ELKAALAEKFGVDPE-----RIILGNGSDEILELLARAYLGP------ 107 (367)
T ss_pred CCCHHHHHHHHHHHHh-hcCCCCC-cHH----HHHHHHHHHhCcCHH-----HEEEcCCHHHHHHHHHHHhcCC------
Confidence 3467788887776643 2222221 222 455668888888642 3899999999887766665322
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|++++++|..+...++..|++++.++++ ++.+|++++++.+++++++|++++++||||.+.|.++|.+
T Consensus 108 -------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 178 (367)
T PRK02731 108 -------GDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVER 178 (367)
T ss_pred -------CCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHH
Confidence 4689999999999998889999999999984 3679999999999988999999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCC-CCcccc-C-CCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DLEWDF-R-LPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~-~~~~~~-~-~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
+++.+.+ ++++++|++|..+.. ... ....+. . .++ .++..+..|.+ .++.++||++.++ +.+ +.+..
T Consensus 179 l~~~~~~----~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l~~~~-~~~-~~l~~ 249 (367)
T PRK02731 179 FLAGVPP----DVLVVLDEAYAEYVR--RKDYEDGLELVAKFPN-VVVTRTFSKAYGLAGLRVGYGIAPP-EII-DALNR 249 (367)
T ss_pred HHHhCCC----CcEEEEECcHHHhcc--CcCcccHHHHHhhcCC-EEEEeeehHhhcCcccceeeeeCCH-HHH-HHHHH
Confidence 9987521 899999999987642 111 001111 1 122 34445666864 5678899998643 221 11110
Q ss_pred ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec
Q 010897 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (498)
Q Consensus 303 ~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (498)
+ ...+. ...+.|+++...+.... +++..++..++++++.+.|++.+ +.+.. +..+++.++++
T Consensus 250 ---~----~~~~~-------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~g~~~~i~~~ 312 (367)
T PRK02731 250 ---V----RQPFN-------VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIP--SVGNFILVDFD 312 (367)
T ss_pred ---c----cCCCC-------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC--CCceEEEEECC
Confidence 0 01111 12345666666665433 56677777788899999999885 76653 25688888873
Q ss_pred CCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 382 DSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 382 ~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+ ..+..+++++|.++|+.+...... ...+++|++++ +.+++++|++.|+++++
T Consensus 313 ~--~~~~~~~~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 313 D--GKDAAEAYQALLKRGVIVRPVAGY---GLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred C--CCCHHHHHHHHHHCCEEEEeCCCC---CCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 3 457889999999999987654321 11357999987 77899999999988764
No 122
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.5e-22 Score=203.54 Aligned_cols=314 Identities=17% Similarity=0.124 Sum_probs=215.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+++|.+.+++.+.++....+ ..++..+ ++++++++++.+.+ .+++|+|+++++.+++.++.++
T Consensus 42 ~~~~~v~~a~~~~~~~~~~~--p~~g~~~----lr~~ia~~~~~~~~-----~i~~t~G~~~~l~~~~~~~~~~------ 104 (359)
T PRK03158 42 GPSPKVKEAIAAHLDELALY--PDGYAPE----LRTKVAKHLGVDEE-----QLLFGAGLDEVIQMISRALLNP------ 104 (359)
T ss_pred CCCHHHHHHHHHHHHHhhcC--CCCcHHH----HHHHHHHHhCCCHH-----HEEECCCHHHHHHHHHHHHhCC------
Confidence 35677888887776543222 2234334 45557777787542 3899999999998777766432
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|++++++|..+...+...|++++.+|+++ +.+|++.+++.+++++++|++++|+||||.+.+.++|.+
T Consensus 105 -------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~ 175 (359)
T PRK03158 105 -------GTNTVMAEPTFSQYRHNAIIEGAEVREVPLKD--GGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLS 175 (359)
T ss_pred -------CCEEEEcCCCHHHHHHHHHHcCCeEEEEecCC--CCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 46899999999999999999999999999973 679999999999888999999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
+++.... ++++++|++|+.+...-..+.....+ ..++ ..+..+..|.++ ++.++||++... +.+ +.+..
T Consensus 176 ~~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~-- 246 (359)
T PRK03158 176 FLESVPS----HVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN-LIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNI-- 246 (359)
T ss_pred HHHhCCC----CcEEEEECchHhhcCCcccccHHHHHHhcCC-EEEEEechHhhcCcchhhehhcCCH-HHH-HHHHH--
Confidence 9987421 89999999998865210001100011 1233 445557778764 678889998532 221 11110
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
. ...+ ....++|.++...+.... .++..+...+.++++.+.|++.+ +.+..+ ..+++.+.+.
T Consensus 247 --~---~~~~-------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~--~g~~i~~~~~-- 309 (359)
T PRK03158 247 --A---RPPF-------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPS--QTNFIFVDTG-- 309 (359)
T ss_pred --h---cCCC-------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCC--cCcEEEEECC--
Confidence 0 0011 123445666666664433 34555556678888888998884 776533 4566666652
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+..+++++|.++|+.+...... ...+++|++++ +.+++++|++.|+++
T Consensus 310 --~~~~~~~~~l~~~gv~v~~g~~f---~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 --RDANELFEALLKKGYIVRSGAAL---GFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred --CCHHHHHHHHHHCCeEEeeCCCC---CCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 35678999999999887543211 12468999987 788999999988775
No 123
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=4e-22 Score=203.97 Aligned_cols=341 Identities=16% Similarity=0.124 Sum_probs=226.1
Q ss_pred ccCCCCCcccccc-cCC-ChHHHHHHHHHHhccCC---CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecCh
Q 010897 52 LDGNPRLNLASFV-TTW-MEPECDKLVMASINKNY---VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (498)
Q Consensus 52 ~~~~p~~~~~~~~-~~~-~~~~~~~~l~~~~~~n~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (498)
.+|+..+++.+.. +.. ++|.+.+++.+++++.. ..+....+...+.+++.+++++++|.+. ..+++ +|
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~------~i~~~-sG 102 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA------ALVFQ-SG 102 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc------EEEEC-cH
Confidence 3455555555432 233 56788888888776532 2233445678888999999999998642 24444 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh----C
Q 010897 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----N 202 (498)
Q Consensus 127 sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~----~ 202 (498)
+++++.++.++..+ ++.|+++.+.|.++...+...|++++.++ .+|++++++.+.+ +
T Consensus 103 ~~a~~~a~~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~ 163 (385)
T TIGR01825 103 FNTNQGVLSALLRK-------------GDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYG 163 (385)
T ss_pred HHHHHHHHHHhCCC-------------CCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCC
Confidence 78887777665332 46899999999999988888888776653 3788888887764 5
Q ss_pred CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC-CC-ccccCCCCeeEEEEcCCccCC
Q 010897 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DL-EWDFRLPLVKSINVSGHKYGL 280 (498)
Q Consensus 203 t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~-~~-~~~~~~~~~dsi~~s~hK~l~ 280 (498)
+++|++....+++|.+.|+++|.++|+++ |+++++|++|+.+..+.... .. ..++. +..|++..+.+|++.
T Consensus 164 ~~~v~~~~v~~~tG~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~ 236 (385)
T TIGR01825 164 KKLIVTDGVFSMDGDVAPLPEIVELAERY------GAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIG 236 (385)
T ss_pred CeEEEEecCCcCCCCccCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhh
Confidence 78888888889999999999999999999 99999999997654321000 00 01222 457888899999985
Q ss_pred CCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 281 ~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
. .| ||++.+ ++.+ +.+... ...+...+..+.....++.+++..+.. ..+..++..++++++.+.|++
T Consensus 237 ~-~g-G~~~~~-~~~~-~~~~~~-------~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 237 V-VG-GYAAGH-KELI-EYLKNR-------ARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred c-CC-CEEecC-HHHH-HHHHHh-------CccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 4 33 666533 2221 111100 001111111222333445555544422 134567777889999999998
Q ss_pred CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
++ +++..+ ..+++.+.+.. ..+..++++.|.++|+.++....+....+..++|++....++.++++++++.|+++
T Consensus 304 ~g-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 304 LG-YDTGGS--ETPITPVVIGD--EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred cC-CCCCCC--CCCEEEEEECC--HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 75 776643 35666666532 22456899999999998765444332234578999988889999999999999998
Q ss_pred HHH
Q 010897 441 LKE 443 (498)
Q Consensus 441 l~~ 443 (498)
++.
T Consensus 379 ~~~ 381 (385)
T TIGR01825 379 GKE 381 (385)
T ss_pred HHH
Confidence 865
No 124
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=4.6e-22 Score=202.32 Aligned_cols=317 Identities=16% Similarity=0.105 Sum_probs=216.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
.+++.+.+++.+.... ...|....+ . ++++++++++|++.+ .+++|+|+++++.+++.++.++
T Consensus 49 ~~~~~~~~al~~~~~~-~~~Y~~~~g-~----~lr~~ia~~~~~~~~-----~i~~t~G~~~~l~~~~~~~~~~------ 111 (371)
T PRK05166 49 GPSPAVRRAFADIAEL-LRLYPDPQG-R----ALREAIAARTGVPAD-----RIILGNGSEDLIAVICRAVLRP------ 111 (371)
T ss_pred CCCHHHHHHHHHHHHH-hhcCCCCcH-H----HHHHHHHHHhCcCHH-----HEEEcCCHHHHHHHHHHHhcCC------
Confidence 4566777777765433 222322222 2 455668888888642 3899999999998777766332
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
+++|+++.++|..+...++..|++++.++++++ +.+|++++++.+++++++|++++++||||.+.+.+++.+
T Consensus 112 -------gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 183 (371)
T PRK05166 112 -------GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD-LGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLAR 183 (371)
T ss_pred -------CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 468999999999999999999999999999764 789999999999888999999999999999999999998
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCcccc-C-CCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R-LPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~-~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
+++...+ +++|++|++|+.+...-..+.....+ . .++ .++..|..|.+ +++.++||++..+++.. ..+..
T Consensus 184 l~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~l~GlRiG~~i~~~~~l~-~~~~~- 256 (371)
T PRK05166 184 VLDATPP----ETLIVVDEAYAEYAAGDDYPSALTLLKARGLP-WIVLRTFSKAYGLAGLRVGYGLVSDPELV-GLLDR- 256 (371)
T ss_pred HHHhCCC----CcEEEEECcHHHhcCCcCcccHHHHHhhcCCC-EEEEeechHhhhcchhheeeeecCCHHHH-HHHHH-
Confidence 8876421 78999999999875210001100001 1 122 34556777866 48899999886554322 11110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
.. ..+ + ...+.|.+++..+.. +.+++..+...+.++++.+.|++.+ +.+.. + ..+++.++++
T Consensus 257 ---~~---~~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p-~-~g~fl~~~~~- 319 (371)
T PRK05166 257 ---VR---TPF----N---VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIAP-S-RANFLFFDAR- 319 (371)
T ss_pred ---hc---cCC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCC-C-cCCEEEEeCC-
Confidence 00 011 1 122345444544433 3456667777888899999999885 76543 2 4566666652
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+..++.+.|.++|+.+.....+ ....++|++++ +.+++++|++.|+.++
T Consensus 320 ---~~~~~l~~~l~~~gi~v~p~~~~---~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 320 ---RPASAVAEALLRQGVIVKPWKQP---GFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred ---CCHHHHHHHHHHCCeEEecCCCC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 25678999999999887543221 23568999998 6677888888887764
No 125
>PRK08068 transaminase; Reviewed
Probab=99.91 E-value=1.1e-21 Score=200.93 Aligned_cols=323 Identities=10% Similarity=-0.033 Sum_probs=214.4
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
++|....|.. +++.+.+.+.++++.. ...|...++..++++++.+++.+.+|.+.+.+ ..+++|+|+++++.+++.
T Consensus 35 i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~--~~i~it~G~~~~l~~~~~ 112 (389)
T PRK08068 35 INLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPE--TEVAILFGGKAGLVELPQ 112 (389)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccEEEcCCcHHHHHHHHH
Confidence 4444444433 3466788887777643 22354556778899998888887778654321 137899999999988777
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
++..+ ++.|++++++|..+...++..|++++.+|+++ +++.+|++++++.+.+++++|++++|+||
T Consensus 113 ~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NP 179 (389)
T PRK08068 113 CLMNP-------------GDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNP 179 (389)
T ss_pred HhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCC
Confidence 66432 47899999999999999999999999999974 35789999999999888999999999999
Q ss_pred cccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc---cCCCCeeEEEEcCCccC-CCCCCeEE
Q 010897 215 TGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD---FRLPLVKSINVSGHKYG-LVYAGVGW 287 (498)
Q Consensus 215 tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~---~~~~~~dsi~~s~hK~l-~~p~g~g~ 287 (498)
||.+.+. ++|.++|+++ ++++++|++|+.+.. ........ ........+..|..|.+ .++.++||
T Consensus 180 TG~~~s~~~~~~l~~la~~~------~~~ii~Deay~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 180 TGAVATKAFFEETVAFAKKH------NIGVVHDFAYGAIGF--DGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred CCCcCCHHHHHHHHHHHHHc------CeEEEEehhhhhhcc--CCCCCcChhhCCCccCCEEEEecchhccCCccceeEe
Confidence 9999776 5677788999 999999999987641 11111000 11112234556777876 68888999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
++. +++.+ ..+...... +. .+. . ...|.++...+ +.+.++...+...+.++++.+.|++++ +.
T Consensus 252 ~~~-~~~l~-~~l~~~~~~-------~~--~~~--~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~ 316 (389)
T PRK08068 252 AVG-NESVI-EAINLLQDH-------LF--VSL--F-GAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG-WE 316 (389)
T ss_pred Eec-CHHHH-HHHHHHHhh-------cc--CCC--C-hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-Cc
Confidence 984 33222 211110000 00 111 1 11233333333 234456777788888999999999885 66
Q ss_pred EeeCCCCccEEEEEecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeec
Q 010897 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
+..+ .+..++.+.+++ ..+..++++.|.+ +|+.+....... ..+..++|+++.
T Consensus 317 ~~~~-~g~~~~~v~~~~--~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~ 370 (389)
T PRK08068 317 VDAP-KGSFFAWMPVPK--GYTSEQFADLLLEKAHVAVAPGNGFG-EHGEGYVRVGLL 370 (389)
T ss_pred ccCC-CeeEEEEEECCC--CCCHHHHHHHHHHhCCEEEecchHhC-ccCCCeEEEEEc
Confidence 5533 233445667743 3577899999986 698875432111 123568999996
No 126
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.91 E-value=9.9e-22 Score=201.71 Aligned_cols=345 Identities=12% Similarity=0.017 Sum_probs=223.9
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCC-CCCCCCcceeeecChhHHHH
Q 010897 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIM 131 (498)
Q Consensus 54 ~~p~~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~sea~~ 131 (498)
|.+.+++....+.. +++.+.+++.+.++. ...|....+..++++.+.+++.+.+|++ .+.. ..+++|+|+++++.
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~--~~i~it~G~~~al~ 104 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLDG-LASYPTTAGLPALREAIAAWLERRYGLPALDPA--TQVLPVNGSREALF 104 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhhh-hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCcc--ceEEECCChHHHHH
Confidence 34445555544443 456788888776653 3445555677889999999998888875 3221 13889999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEee
Q 010897 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (498)
Q Consensus 132 la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~ 210 (498)
+++.++.++ +.+++.|+++.++|..+..+++.+|++++.||+++ ++|.+|++++++.+.+++++|++++
T Consensus 105 ~~~~~l~~~----------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 174 (396)
T PRK09147 105 AFAQTVIDR----------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCS 174 (396)
T ss_pred HHHHHHcCC----------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcC
Confidence 888877431 11246899999999999999999999999999973 4578999999988888899999999
Q ss_pred ccCCccccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-c----cc---CCCCeeEEEEcCCc-c
Q 010897 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-W----DF---RLPLVKSINVSGHK-Y 278 (498)
Q Consensus 211 ~~t~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~----~~---~~~~~dsi~~s~hK-~ 278 (498)
|+||||.+. .+++|.++|+++ +++|++|++|+.+...-..+... . .. ..++ ..+..|..| +
T Consensus 175 P~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~ 247 (396)
T PRK09147 175 PGNPTGAVLPLDDWKKLFALSDRY------GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKR-LVVFHSLSKRS 247 (396)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEeeccccccccCCCCCCchhhhhccccCcccccc-EEEEecccccc
Confidence 999999996 566777888899 99999999999875210001000 0 00 0122 355567788 6
Q ss_pred CCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHH
Q 010897 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREG 357 (498)
Q Consensus 279 l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~ 357 (498)
++++.++||++..+ +.+ +.+.....+.. .+ ...+.|.+++..+. .+.+++..+...+.++.+.+.
T Consensus 248 ~~~GlRiG~~~~~~-~l~-~~~~~~~~~~~---------~~---~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
T PRK09147 248 NVPGLRSGFVAGDA-ALL-KKFLLYRTYHG---------CA---MPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPI 313 (396)
T ss_pred CCccceeeeecCCH-HHH-HHHHHHhhhcc---------cC---CCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 78889999987432 221 21111101110 01 12233444444443 234566667777788888888
Q ss_pred HhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCC-----CCCCeeEEEEeecCCCCHHHHH
Q 010897 358 LEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPA-----NAENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~-----~~~~~~~lRv~v~~~~t~~~~~ 431 (498)
|++. +.+.. +++..++.++++ .+..+++++|. ++|+.+....... ...+..++|+++.. +.++++
T Consensus 314 L~~~--~~~~~-p~~g~f~~~~~~----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~ 384 (396)
T PRK09147 314 LAPV--LDVQL-PDAGFYLWAKVP----GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECV 384 (396)
T ss_pred HHHh--cCCCC-CCeeEEEEEECC----CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHH
Confidence 8774 43332 335667777774 34568888875 6798774332111 01235689999874 455555
Q ss_pred HHHHHHHHHH
Q 010897 432 RLISHIEEVL 441 (498)
Q Consensus 432 ~l~~~l~~~l 441 (498)
+.++.|++++
T Consensus 385 ~~l~rl~~~~ 394 (396)
T PRK09147 385 EAAERIVDFC 394 (396)
T ss_pred HHHHHHHHHh
Confidence 5555554443
No 127
>PRK07777 aminotransferase; Validated
Probab=99.91 E-value=1.7e-21 Score=199.29 Aligned_cols=328 Identities=14% Similarity=0.072 Sum_probs=216.6
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g 149 (498)
+.+.+.+.+.+......|...++..++++.+.+++.+.+|++.+.+ ..+++|+|+++|+.+++.++..+
T Consensus 40 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~~~~~~~--------- 108 (387)
T PRK07777 40 PEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPD--TEVLVTVGATEAIAAAVLGLVEP--------- 108 (387)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCCcHHHHHHHHHHhcCC---------
Confidence 4456666666655444566667788999999999988888864321 13889999999998877765332
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC--ccccCHHHHHHHhhhCCeEEEEeeccCCccccc---CHHHH
Q 010897 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGSTLTGEFE---DVKLL 224 (498)
Q Consensus 150 ~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~---~l~~I 224 (498)
+++|+++.+.|..+..+++..|.+++.++++++ +|.+|+++|++++++++++|++++++||||... ++++|
T Consensus 109 ----gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l 184 (387)
T PRK07777 109 ----GDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAI 184 (387)
T ss_pred ----CCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHH
Confidence 468999999999999999999999999998753 478999999999988899999999999999985 48889
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCC-Cccc-c-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-F-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~~~-~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~ 300 (498)
.++|+++ ++++++|++|+++.. .... .... + .....+++..|.+|.++ ++.++||++...+ .+ ..+
T Consensus 185 ~~~~~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-l~-~~~ 254 (387)
T PRK07777 185 AELAVEH------DLLVITDEVYEHLVF--DGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAP-LI-AAV 254 (387)
T ss_pred HHHHHhc------CcEEEEeccchhccc--CCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHH-HH-HHH
Confidence 9999999 999999999987652 1111 0100 1 12235677889999875 6777899875431 11 111
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
.....+.. ...+. . .|.++...+ +....++..+...++++++.+.|++.+ +++..+. +..++.+
T Consensus 255 ~~~~~~~~-------~~~~~--~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~-g~~~~~~ 320 (387)
T PRK07777 255 RAAKQYLT-------YVGGA--P---FQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSA-GTYFLCA 320 (387)
T ss_pred HHHHhhcc-------cCCCC--H---HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCC-cceEEEe
Confidence 11111111 00111 1 122222222 233445666777889999999999875 7765442 3334444
Q ss_pred EecCCCCCCHHHHHHHHH-hcCcEeeeec-CCC-CCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 379 SLKDSSAHTVFEISEGLR-KFGWIVPAYT-MPA-NAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~-~~G~~v~~~~-~~~-~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
++++....+..+++++|. ++|+.+.... +.. ...+..++|+++.. ..+++++.++.|+
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~ 381 (387)
T PRK07777 321 DPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLR 381 (387)
T ss_pred cccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 654222246789999996 5798775432 211 11234689999963 4555544444443
No 128
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=8e-22 Score=202.69 Aligned_cols=361 Identities=16% Similarity=0.137 Sum_probs=231.7
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHh-ccCCCCCc------CCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDMD------EYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~-~~n~~~~~------~~~~~~~le~~~~~~la~l~g~~ 111 (498)
..++++.+++....+ ...+|+..- ..+.+|.+.+++...+ +....++. ..+...++|+-+.+.+++++|.+
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~~l~~s-en~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~ 90 (416)
T PRK13034 13 DDEVFAAINKELERQ-QDHLELIAS-ENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD 90 (416)
T ss_pred CHHHHHHHHHHHHHH-hcCeeeccc-ccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC
Confidence 357777776665433 233443332 2245788888888775 54322111 23556777776777899999987
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH-HHHHHHH--cCCee--EEEEecCC
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFARY--FEVEL--KEVKLEEG 186 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~-~~~~~~~--~g~~~--~~v~~~~~ 186 (498)
. ..+++++|+.|++.++.++..+ +++|++++..|.+ +...++. .+... ..++++..
T Consensus 91 ~------alv~~~SG~~A~~~~l~al~~~-------------GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (416)
T PRK13034 91 Y------ANVQPHSGSQANGAVYLALLKP-------------GDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL 151 (416)
T ss_pred c------eEEecCCcHHHHHHHHHHhcCC-------------CCEEEEcCccceeeeecCCcceeccceeeeEEcccccc
Confidence 4 1355678899999888877432 5799999999976 3322222 12222 34444444
Q ss_pred ccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC
Q 010897 187 YYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (498)
Q Consensus 187 ~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~ 265 (498)
++.+|++++++.+.. ++++|++.. ..+|..-|+++|.++|+++ |++++||+||+.++.. .+... ..+
T Consensus 152 ~~~~d~~~le~~l~~~~~klVi~~~--~~~g~~~dl~~l~~la~~~------g~~livD~Aha~G~~~--~g~~~--~~~ 219 (416)
T PRK13034 152 TGLIDYDEVEELAKEHKPKLIIAGF--SAYPRELDFARFREIADEV------GALLMVDMAHIAGLVA--AGEHP--NPF 219 (416)
T ss_pred cCCcCHHHHHHHHhhcCCeEEEECC--CccccccCHHHHHHHHHHc------CCEEEEeCcccccCcc--cCCCC--CCC
Confidence 467999999998854 677775543 3367888999999999999 9999999999876532 12111 122
Q ss_pred CCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHH
Q 010897 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIME 345 (498)
Q Consensus 266 ~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~ 345 (498)
..+|+++.++|||+.+|.| |+++.+++... .. .+. +.... +..+.....+.+...++...-..+..++.+
T Consensus 220 ~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~--~~~-~~~~~-----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 220 PHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KK--INS-AVFPG-----LQGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCceEEEEeCcccCCCCCC-eEEEECcHHHH-HH--HHh-hcCCc-----ccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 4589999999999988777 55555443211 11 111 11110 111222233444444443332233456678
Q ss_pred HHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC---CCCeeEEEEeec
Q 010897 346 NCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN---AENVAVLRVVVR 422 (498)
Q Consensus 346 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~---~~~~~~lRv~v~ 422 (498)
+..+++++|++.|++.+ |++..+....+++.+.+.+ .+.+...+.++|.+.|+.+.....|.. ......+|++++
T Consensus 290 ~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~-~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~ 367 (416)
T PRK13034 290 QVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRP-KGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTP 367 (416)
T ss_pred HHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCC-CCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcH
Confidence 99999999999999985 8887532256777777643 245677888999999998865332221 011456999988
Q ss_pred C----CCCHHHHHHHHHHHHHHHHHH
Q 010897 423 E----DFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 423 ~----~~t~~~~~~l~~~l~~~l~~l 444 (498)
. .++.++++++++.|++++...
T Consensus 368 ~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 368 AGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 7 667999999999999998743
No 129
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=3.7e-22 Score=207.03 Aligned_cols=368 Identities=15% Similarity=0.043 Sum_probs=233.9
Q ss_pred CCcccccccCCchHHHhhCCCCCCCCCCCCHHHHHHHHHHhhhccCCCCCcccccccCCC-hHHHHHHHHHHhccCCCCC
Q 010897 9 DSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDM 87 (498)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~~~n~~~~ 87 (498)
+++|++.+..++|++......... ..... .+...+++..+.+... .|.+.+.+.+.... ...|
T Consensus 54 ~~~g~i~~~~~~G~~v~~~~~~~~-~~~~~--------------~~~~~i~L~~g~p~~~~~p~~~~~~~~~~~~-~~~Y 117 (431)
T PRK15481 54 VTAGLAQSQGRNGTVIRGSPSPVA-LEGGD--------------PGTPLHDLAGGNPDPQRLPDLSRYFARLSRT-PRLY 117 (431)
T ss_pred HHCCCEEEeCCCceEEccCcchhh-hcccC--------------CcchhhhhhcCCCChhHhHHHHHHHHHhhhh-hhhc
Confidence 577888888888888754321100 00000 0011122222222222 24455655554332 2233
Q ss_pred cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHH
Q 010897 88 DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (498)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~ 167 (498)
....+..++++.+.+|+.+..+.+ ..+++|+|+++++.+++.++.++ ++.|++++|+|..+
T Consensus 118 ~~~~g~~~lr~~ia~~~~~~~~~~------~~Iiit~G~~~al~~~~~~l~~p-------------gd~Vlv~~P~y~~~ 178 (431)
T PRK15481 118 GDAPVSPELHAWAARWLRDDCPVA------FEIDLTSGAIDAIERLLCAHLLP-------------GDSVAVEDPCFLSS 178 (431)
T ss_pred CCcCCCHHHHHHHHHHHhhccCCc------CeEEEecCcHHHHHHHHHHhCCC-------------CCEEEEeCCCcHHH
Confidence 333455667776666655433211 13999999999999998887543 47899999999999
Q ss_pred HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEe-eccCCcccccCHH---HHHHHHHHhhcccCCCceEEE
Q 010897 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI-LGSTLTGEFEDVK---LLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 168 ~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~-~~~t~tG~~~~l~---~I~~la~~~~~~~~~~~~l~v 243 (498)
...++.+|++++.||++++ .+|+++|++++++++++|+++ +|+||||.+.+.+ +|.++|++++ +++|++
T Consensus 179 ~~~~~~~g~~~~~v~~~~~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~-----~~~ii~ 251 (431)
T PRK15481 179 INMLRYAGFSASPVSVDAE--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYP-----QVLVII 251 (431)
T ss_pred HHHHHHcCCeEEeeccCCC--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcC-----CceEEe
Confidence 9999999999999999764 389999999998888888887 9999999998876 8888998875 899999
Q ss_pred ecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchH
Q 010897 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~ 323 (498)
|++|+.+...-..+.... ..+++ ++.-|..|.++++.++||++.. ++.. ..+.....+. . . ..
T Consensus 252 De~Y~~~~~~~~~~~~~~--~~~~v-i~~~SfSK~~~~GlRiG~~i~~-~~~~-~~~~~~~~~~-----~----~---~~ 314 (431)
T PRK15481 252 DDHFALLSSSPYHSVIPQ--TTQRW-ALIRSVSKALGPDLRLAFVASD-SATS-ARLRLRLNSG-----T----Q---WV 314 (431)
T ss_pred cCchhhhccCCCCCCCcC--CCCCE-EEEeeeccccCCCceeEEEeCC-HHHH-HHHHHHHhcc-----c----c---CC
Confidence 999998752100111111 12333 4555778877788899998843 2221 1111000000 0 0 12
Q ss_pred HHHHHHHHHHHhcHHH----HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcC
Q 010897 324 QIIAQYYQFIRLGFEG----YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFG 399 (498)
Q Consensus 324 ~~~a~~~~l~~lg~~g----~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G 399 (498)
..+.|.++...+.... +++..+...+.++.+.+.|++.+ +.+..+ .+.+++.++++. +..++++.|.++|
T Consensus 315 s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~-~~~~~p-~gg~f~~~~l~~----~~~~~~~~l~~~g 388 (431)
T PRK15481 315 SHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYG-IAIPSP-GDGLNLWLPLDT----DSQATALTLAKSG 388 (431)
T ss_pred CHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccccC-CCeEEEEEECCC----CHHHHHHHHHHCC
Confidence 3345666665554332 34566677778888999999874 665333 356777777743 4568999999999
Q ss_pred cEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 400 WIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 400 ~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+.+.............++|+++.. .+.+++++.++.|+++++
T Consensus 389 V~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 389 WLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred cEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 988653321111223579999964 357788877777777653
No 130
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.91 E-value=6.1e-23 Score=207.15 Aligned_cols=332 Identities=15% Similarity=0.052 Sum_probs=221.7
Q ss_pred cCCChHHHHHHHHHHhc----cCCCCCcCC---cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecC-hhHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASIN----KNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLA 136 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~----~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-~sea~~la~~a 136 (498)
|...++.+.+++.+.+. .....+..+ +...++-+++++.+++++|.+.+ ..+++|.| +|+++..++..
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~----~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN----YKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHh
Confidence 44557788888888763 222222333 45557778999999999998543 23888877 99999888877
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccC-HHHHHHHhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMN-PVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d-~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
+..+ +. ..++|+.....|-+ .+.++..|++++.++++++....+ ++..+..++++|++|++++.+|.|
T Consensus 83 l~~~--------~~--~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~t 151 (355)
T cd00611 83 LLGD--------KG--TADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIH 151 (355)
T ss_pred cCCC--------CC--eEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccc
Confidence 6321 00 12456554444433 446688899999999864311124 333444567789999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCC
Q 010897 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (498)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~ 295 (498)
|... . ++++.+ |++++||++++.+..|+. +. ..+....++||++ +|+|+|+++++.+..
T Consensus 152 G~~~--~---~i~~~~------g~~~~VDa~qs~g~~~id-------v~--~~~~~~ss~~K~l-GP~G~g~l~~~~~~~ 210 (355)
T cd00611 152 GVEF--D---EVPDTG------GVPLVADMSSNILSRPID-------VS--KFGVIYAGAQKNL-GPAGVTVVIVRKDLL 210 (355)
T ss_pred cEEc--c---eecccC------CCeEEEEccccccCCCCC-------HH--HhCEEEeeccccc-CCCceEEEEECHHHH
Confidence 9983 2 445558 999999999988765542 21 2233446699976 699999999987422
Q ss_pred CCcccccccCccCCCC--CCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeC-C
Q 010897 296 LPDELVFHINYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFE-ILSK-D 370 (498)
Q Consensus 296 l~~~~~~~~~yl~~~~--~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-~ 370 (498)
.+.....+.+..... ......++.+...++++.++++.+..+ |++++.++..++++++.+.|++++++. ...+ .
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~ 289 (355)
T cd00611 211 -GKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKR 289 (355)
T ss_pred -hhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHH
Confidence 111111111211000 111113677777889999999999888 799999999999999999999997653 2111 1
Q ss_pred CCc-cEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 371 VGV-PLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 371 ~~~-~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+. .+++|++++. .++ .++.+.+.++|++++... ...+.+|+|+...+|.+|+++|++.|+++
T Consensus 290 ~rs~~vvsf~~~~~-~l~-~~~~~~~~r~G~~~~~~~-----~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 290 ARSRMNVPFRLGKE-ELE-KEFLKEAEAAGMIGLKGH-----RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HcCceEEEEEcCCh-hhh-HHHHHHHHHCCCcccCCC-----cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 244 4589998542 112 455567788998642211 11357999999999999999999998874
No 131
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-21 Score=199.63 Aligned_cols=323 Identities=15% Similarity=0.034 Sum_probs=213.6
Q ss_pred CcccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
+++....+. .+++.+.+.+.+++... ...|....+..++++.+.+++.+.+|.+.+.. ..+++|+|+++++.+++.
T Consensus 34 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~ii~t~G~~~~i~~~~~ 111 (385)
T PRK09276 34 ISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPE--TEVISLIGSKEGIAHIPL 111 (385)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEccCcHHHHHHHHH
Confidence 333443333 34567888888777542 23344444667888888888888778754321 137788999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
++.++ ++.|++++++|..+...++..|++++.+|+++ +++.+|++++++.+.+++++|++++|+||
T Consensus 112 ~~~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NP 178 (385)
T PRK09276 112 AFVNP-------------GDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNP 178 (385)
T ss_pred HhCCC-------------CCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCC
Confidence 76432 47899999999999999999999999999964 35788999999998888999999999999
Q ss_pred cccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--cc-CCCCeeEEEEcCCccC-CCCCCeEE
Q 010897 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DF-RLPLVKSINVSGHKYG-LVYAGVGW 287 (498)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~-~~~~~dsi~~s~hK~l-~~p~g~g~ 287 (498)
||.+.+ +++|.++|+++ +++|++|++|+.+.. ....... .+ .......+..+..|.+ .++.++||
T Consensus 179 tG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 179 TGAVADLEFFEEVVDFAKKY------DIIVCHDAAYSEIAY--DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred CCCCCCHHHHHHHHHHHHHC------CcEEEEecchhheec--CCCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 999977 47788888999 999999999998752 1101110 11 1112344556777876 57778999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
++.. ++.+ +.+.....+.. .. .....|.++...+. ...+++..+...++++++.+.|++.+ ++
T Consensus 251 ~i~~-~~l~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 315 (385)
T PRK09276 251 AVGN-ADLI-AGLGKVKSNVD---------SG---VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-LE 315 (385)
T ss_pred eeCC-HHHH-HHHHHHHhhcc---------CC---CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 9843 2221 21111001110 00 11123444444442 33346666777778999999999884 77
Q ss_pred EeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
+..+. +..++.+++++ ..+..+++++|. ++|+.+....... ..+..++|+++.
T Consensus 316 ~~~~~-~~~~~~v~~~~--~~~~~~l~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~ 369 (385)
T PRK09276 316 VEPPK-ATFYVWAPVPK--GYTSAEFATLLLDKAGVVVTPGNGFG-EYGEGYFRIALT 369 (385)
T ss_pred ccCCC-cceEEEEECCC--CCCHHHHHHHHHHhCCEEECCchhhC-CCCCCeEEEEeC
Confidence 66442 33345566643 467789999876 5798875432111 122468999996
No 132
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.91 E-value=2e-21 Score=198.92 Aligned_cols=344 Identities=10% Similarity=-0.022 Sum_probs=223.7
Q ss_pred CCCCCcccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHH
Q 010897 54 GNPRLNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (498)
Q Consensus 54 ~~p~~~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~ 131 (498)
+...+++....+. ++++.+.+.+.+++... ...|...++..++++.+.+++.+..|++.+.+ ..+++|+|+++++.
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~Gs~~al~ 106 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPE--TEVLPLIGSQEGTA 106 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCc--CeEEECCCcHHHHH
Confidence 3334455544443 34677888888776543 33455556778899999999888778654321 13888999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEee
Q 010897 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (498)
Q Consensus 132 la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~ 210 (498)
+++.++.++ ++.|++++++|..+...++..|++++.+|+++ +.+.+|++++++.+.+++++|+++.
T Consensus 107 ~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 173 (388)
T PRK07366 107 HLPLAVLNP-------------GDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSY 173 (388)
T ss_pred HHHHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeC
Confidence 888876542 57899999999999999999999999999974 3478899999888877899999999
Q ss_pred ccCCcccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-CccccCC--C-CeeEEEEcCCccC-CCC
Q 010897 211 GSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWDFRL--P-LVKSINVSGHKYG-LVY 282 (498)
Q Consensus 211 ~~t~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~~~~~~--~-~~dsi~~s~hK~l-~~p 282 (498)
|+||||.+.+. ++|.++|+++ +++|++|++|+.+.. .... ....... . ....+..|..|.+ +++
T Consensus 174 p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 174 PHNPTTAIAPLSFFQEAVAFCQQH------DLVLVHDFPYVDLVF--DGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHc------CeEEEEecchhhccc--CCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 99999999655 5577788999 999999999998752 1111 1101111 1 1234556778876 688
Q ss_pred CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 283 ~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
.++||++. +++.+ +.+.....+ +.+ +. ...+ +.+++..+ ..+.+++..+...+.++++.+.|++
T Consensus 246 lRiG~~v~-~~~li-~~l~~~~~~-------~~~--~~--~~~~-~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~ 311 (388)
T PRK07366 246 FRIGFAIG-NAQLI-QALRQVKAV-------VDF--NQ--YRGI-LNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ 311 (388)
T ss_pred hhheehcC-CHHHH-HHHHHHHhh-------ccc--CC--CHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999984 32222 111100000 001 11 0111 12222222 2344567777788889999999998
Q ss_pred CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
.+ +....+ .+.+++.+++++.-..+..++++.| .++|+.+....... ..+.+++|+++.. +.+++++.++.|++
T Consensus 312 ~~-~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~l~~~l~rl~~ 386 (388)
T PRK07366 312 IG-WPVPLP-EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG-KSGEGYVRFALVH--DPDILEEAVERIAA 386 (388)
T ss_pred CC-CcccCC-CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC-cCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 85 654433 3567777777532112466888777 56798775432111 1234689999863 45666655554443
No 133
>PRK07550 hypothetical protein; Provisional
Probab=99.91 E-value=2.7e-21 Score=197.80 Aligned_cols=339 Identities=14% Similarity=0.074 Sum_probs=222.8
Q ss_pred CCcccccccCC-ChHHHHHHHHHHhcc-CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHH
Q 010897 57 RLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (498)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~l~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~ 134 (498)
.+.+....+.. +++.+.+.+.+.+.. ....|...++..++++.+.+++.+..|...+. ..+++|+|+++++.+++
T Consensus 31 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~ 107 (386)
T PRK07550 31 LIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP---EQVHITSGCNQAFWAAM 107 (386)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc---ceEEEecCcHHHHHHHH
Confidence 34445544433 356677777776543 23345555688999999999999888865432 23889999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
.++..+ +++|++++++|..+...++..|++++.+++++ +++.+|++.+++++++++++|++++|+|
T Consensus 108 ~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~N 174 (386)
T PRK07550 108 VTLAGA-------------GDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNN 174 (386)
T ss_pred HHhcCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCC
Confidence 776432 47899999999999888999999999999974 4577899999999998899999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC---CCeeEEEEcCCccCC-CCCCeE
Q 010897 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL---PLVKSINVSGHKYGL-VYAGVG 286 (498)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~---~~~dsi~~s~hK~l~-~p~g~g 286 (498)
|||.+.+ +++|.++|+++ +++|++|++|+.+.. ........+.. ..-..+..|.+|.++ ++.++|
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~------~~~iI~Dd~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 246 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRH------GIALILDETYRDFDS--GGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVG 246 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHc------CeEEEEeccchhhcc--CCCCCcchhhCCCccccEEEEecchhhccCcccceE
Confidence 9999865 78899999999 999999999987642 11111001111 112344668889765 778899
Q ss_pred EEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010897 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRF 364 (498)
Q Consensus 287 ~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (498)
|++..+. .+ ..+. .+... .+... ..+.|+++...+. .+..++..++..+.++++.+.|.+.+++
T Consensus 247 ~i~~~~~-~~-~~~~---~~~~~----~~~~~-----s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 312 (386)
T PRK07550 247 AVVASPA-RI-AEIE---KFMDT----VAICA-----PRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGW 312 (386)
T ss_pred eeecCHH-HH-HHHH---HHHhh----cccCC-----CcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9986432 11 1111 11110 01101 1223333333332 2223445566677888899999887656
Q ss_pred EEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 365 EILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
.+. +.+..++.++++. .+.+..+++++|. ++|+.+....... ..+..++|+++.. .+.+++++.++.|.
T Consensus 313 ~~~--~~g~~~~~~~~~~-~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~-~~~~~~~~~~~~l~ 382 (386)
T PRK07550 313 ELL--ASGAYFAYVRHPF-PDRPSREVARRLAKEAGILCLPGTMFG-PGQEGYLRLAFAN-ADVAGIGELVERLR 382 (386)
T ss_pred eeC--CCceEEEEecCCC-CCCCHHHHHHHHHHhcCEEEeCchhhC-CCCCCEEEEEeec-CCHHHHHHHHHHHH
Confidence 554 2245566666642 1467889999875 6798875432211 1234689999963 34556655554444
No 134
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=3.3e-21 Score=197.57 Aligned_cols=345 Identities=14% Similarity=0.080 Sum_probs=220.5
Q ss_pred CcccccccC-CChHHHHHHHHHHhccC---CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la 133 (498)
+++....|. ++++.+.+++..+++.. ...|....+...+++.+.+++.+.++.+.+. ..+++|+|+++++.++
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA---DHIVMTCGAAGALNVA 112 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc---CcEEEeCChHHHHHHH
Confidence 344444443 34567888887776542 2334344567778888777777766553322 2388999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
+.++..+ +++|++++++|..+..+++..|++++.++++++++.+|++++++++++++++|++++++|
T Consensus 113 ~~~l~~~-------------gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~N 179 (394)
T PRK06836 113 LKAILNP-------------GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNN 179 (394)
T ss_pred HHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCC
Confidence 8776432 468999999999999999999999999999876578999999999998999999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEE
Q 010897 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (498)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~ 289 (498)
|||.+.| +++|.++|++..++++.++++++|++|..+.. .............-..+..|..|.+. ++.++||++
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY--DGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc--CCCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 9999976 55566678882222222999999999998752 11111101111112466678899775 778899998
Q ss_pred EeCCCCCCccccc--ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010897 290 WRTKDDLPDELVF--HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (498)
Q Consensus 290 ~~~~~~l~~~~~~--~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (498)
..+. . .+.... ......... .. . . ...+.|.+....+.. +. ..+...+.++.+.+.|++.+ +++.
T Consensus 258 ~~~~-~-~~~~~~~~~~~~~~~~~-~~-~-~----~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~~g-~~~~ 324 (394)
T PRK06836 258 VNPE-M-EDADDLVAALVFANRIL-GF-V-N----APALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTELG-FECV 324 (394)
T ss_pred cCHH-H-hhhHHHHHHHHHHhhcc-cc-c-c----CCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHhCC-CEee
Confidence 6532 1 110000 000000000 00 0 0 112233333333332 11 23455667788888998885 7765
Q ss_pred eCCCCccEEEE-EecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 368 SKDVGVPLVAF-SLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 368 ~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.+ ..+++.| +++. .+..++++.|.++|+.+....... ..+++|+++. .++++++..++.|+++++.
T Consensus 325 ~~--~gg~~~~~~~~~---~~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 325 KP--QGAFYLFPKSPE---EDDVAFCEKAKKHNLLLVPGSGFG---CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred cC--CceEEEEEeCCC---CCHHHHHHHHHhCCEEEECchhcC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 44 3344444 5532 367788999999998775432211 1357999997 3678887777777777653
No 135
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.5e-21 Score=197.82 Aligned_cols=322 Identities=13% Similarity=0.051 Sum_probs=210.8
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
++.+.+.+..........|....+...+++.+.+++.+..|++.+. ..+++|+|+++|+.+++.++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---~~i~it~G~~~al~~~~~~~~~~-------- 112 (384)
T PRK06348 44 DESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR---NEIMATVGACHGMYLALQSILDP-------- 112 (384)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh---hhEEEcCChHHHHHHHHHHhcCC--------
Confidence 4555554444443333445555566789999999998877776533 23899999999999888887442
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLL 224 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I 224 (498)
+++|+++.++|..+..+++.+|.+++.+++. ++++.+|+++|++++.+++++|+++.|+||||.+.+ +++|
T Consensus 113 -----gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 113 -----GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred -----CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 4689999999999999999999999999874 345789999999999888999999999999999965 6778
Q ss_pred HHHHHHhhcccCCCceEEEecCcccccccccCCCCc-ccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccc
Q 010897 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~ 301 (498)
.++|+++ +++|++|++|+.+.. ...... ..+ +...-..+..|..|.++ ++.++||++..+ + +...+.
T Consensus 188 ~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~-~-~~~~~~ 257 (384)
T PRK06348 188 AKIAIEY------DLFIISDEVYDGFSF--YEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD-Y-IIETAK 257 (384)
T ss_pred HHHHHHC------CeEEEEeccccccee--CCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCH-H-HHHHHH
Confidence 8889999 999999999998752 111000 111 11222355567788765 889999998642 1 111111
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE-E
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA-F 378 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~-f 378 (498)
....+. . .+ ...+.|.++...+. .+-.++..+...++++++.+.|++++++.+..+ ..++++ +
T Consensus 258 ~~~~~~-----~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p--~gg~~~~~ 323 (384)
T PRK06348 258 IINEGI-----C----FS---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPP--KGSIYAFI 323 (384)
T ss_pred HHHHhc-----c----CC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccC--CeeEEEEE
Confidence 000000 0 11 12233444443332 222345566666778889999988876665533 455554 4
Q ss_pred EecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHH
Q 010897 379 SLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
+++. .+.+..++++.|. +.|+.+.....-. ..+..++|+++. .+.++++..+
T Consensus 324 ~~~~-~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al 376 (384)
T PRK06348 324 NIKK-TGLSSVEFCEKLLKEAHVLVIPGKAFG-ESGEGYIRLACT--VGIEVLEEAF 376 (384)
T ss_pred eccc-CCCCHHHHHHHHHHhCCEEEcCchhhc-cCCCCeEEEEec--CCHHHHHHHH
Confidence 6642 2467788998876 5798775332111 123568999985 2445444333
No 136
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=1.5e-21 Score=201.11 Aligned_cols=332 Identities=14% Similarity=0.097 Sum_probs=218.3
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCcCC---cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 64 VTTWMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 64 ~~~~~~~~~~~~l~~~~~~n~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
....++|.+.+++.+.+.+.......+ .+......++.+.+++++|.+. .++.++|++|+..++..+...
T Consensus 57 lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~-------~~~~~sG~~an~~ai~~l~~~ 129 (407)
T PRK09064 57 LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA-------ALVFTSGYVSNDATLSTLAKL 129 (407)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHHhCC
Confidence 445667889999988877643322111 1234555667777999998643 566666788887777665331
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCcc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTG 216 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG 216 (498)
..+..|+.....|.+....++..|+++..++. .|+++|+++++ +++++|+++.+++++|
T Consensus 130 -----------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G 192 (407)
T PRK09064 130 -----------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH------NDVAHLEELLAAADPDRPKLIAFESVYSMDG 192 (407)
T ss_pred -----------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCc
Confidence 01345666777899988888888887765542 36777777775 4678999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCccccc-ccccCCCCccccCC-CCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI-APFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~-~~~~~~~~~~~~~~-~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
.+.|+++|.++|+++ +++++||+||+.+. .+... ......++ ...|.+..+.+|.++. .| |+++.+ ++
T Consensus 193 ~~~~l~~i~~l~~~~------~~~livDEa~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~-~G-G~~~~~-~~ 262 (407)
T PRK09064 193 DIAPIAEICDLADKY------NALTYLDEVHAVGMYGPRGG-GIAERDGLMDRIDIIEGTLAKAFGV-MG-GYIAGS-AA 262 (407)
T ss_pred cccCHHHHHHHHHHc------CCEEEEECCCcccccCCCCC-ChHHhcCCCCCCeEEEEecchhhhc-cC-ceEecC-HH
Confidence 999999999999999 99999999997332 11110 00000121 3468888889997743 34 666543 22
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (498)
.+ +.+ ......+....+.+.....+..++++.+... ....++..++++++.+.|++++ ++++.+ ..+
T Consensus 263 ~~-~~l-------~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~ 329 (407)
T PRK09064 263 LV-DAV-------RSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAG-IPVMPN--ESH 329 (407)
T ss_pred HH-HHH-------HHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC--CCC
Confidence 21 111 1001111111222223444555666555433 3345778889999999999975 776643 467
Q ss_pred EEEEEecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++.+.+.+ ..+..++.++|.+ +|+.+.....|....+..++|++++..+|.++++++++.|+++++.+
T Consensus 330 iv~i~~~~--~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 330 IVPVMVGD--PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EEEEEeCC--HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 77777632 1345689998875 59988765555433455789999999999999999999999987653
No 137
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=2.7e-21 Score=198.26 Aligned_cols=343 Identities=13% Similarity=0.008 Sum_probs=221.8
Q ss_pred CCCCCcccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHH
Q 010897 54 GNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (498)
Q Consensus 54 ~~p~~~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~l 132 (498)
+.+.+++....+. .+++.+.+++.+.+.. ...|....+..++++.+.+++.+.+|++.+-.....+++|+|+++++.+
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLHG-LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 3444555554444 3456788888876653 3345555567888989999998887876211001138889999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeec
Q 010897 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (498)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~ 211 (498)
++.++.++ | +...|+++.++|..+...++..|++++.+++++ +++.+|++++++++.+++++|++++|
T Consensus 106 ~~~~l~~~--------g---d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p 174 (393)
T TIGR03538 106 FAQAVINP--------G---QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSP 174 (393)
T ss_pred HHHHHcCC--------C---CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCC
Confidence 88877542 1 112599999999999999999999999999963 34789999999998888999999999
Q ss_pred cCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-----cc---CCCCeeEEEEcCCc-cC
Q 010897 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-----DF---RLPLVKSINVSGHK-YG 279 (498)
Q Consensus 212 ~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-----~~---~~~~~dsi~~s~hK-~l 279 (498)
+||||.+.+ +++|.++|+++ +++|++|++|+.+...-..+.... .. ..++ .++..|..| |+
T Consensus 175 ~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~ 247 (393)
T TIGR03538 175 GNPTGAVLSLDTLKKLIELADQY------GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRR-CLVFHSLSKRSN 247 (393)
T ss_pred CCCcCcccCHHHHHHHHHHHHHC------CEEEEECcchhhcccCCCCCCcCHHHhccccccccccc-EEEEecchhhcC
Confidence 999999976 67888888999 999999999997642100000000 01 1123 356678888 78
Q ss_pred CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHH
Q 010897 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 280 ~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L 358 (498)
+++.++||++... +.+ ..+.....+.. .+ ...+.|.+++..+.. +.+++..+...+.++.+.+.|
T Consensus 248 ~~GlRvG~~i~~~-~l~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 313 (393)
T TIGR03538 248 LPGLRSGFVAGDA-EIL-KAFLRYRTYHG---------CA---MPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEIL 313 (393)
T ss_pred CcccceEEEecCH-HHH-HHHHHHHHhhc---------cC---cCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999987532 221 11110000100 00 123344444444433 345566667777888888888
Q ss_pred hcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeec-CCC----CCCCeeEEEEeecCCCCHHHHHH
Q 010897 359 EKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYT-MPA----NAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~-~~~----~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
++. +.+.. +.+..++.++++ .+..+++++|. ++|+.+.... +.. ...+.+++|+++.. +.++++.
T Consensus 314 ~~~--~~~~~-p~gg~f~~~~~~----~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~ 384 (393)
T TIGR03538 314 GQV--LDLEL-PDAGFYLWPKVP----GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVE 384 (393)
T ss_pred Hhh--CcccC-CCeeEEEEEECC----CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHH
Confidence 775 33322 335667777774 24568888875 5798774332 110 11235689999864 4555554
Q ss_pred HHHHHH
Q 010897 433 LISHIE 438 (498)
Q Consensus 433 l~~~l~ 438 (498)
.++.|+
T Consensus 385 ~l~~l~ 390 (393)
T TIGR03538 385 AAERIR 390 (393)
T ss_pred HHHHHH
Confidence 444443
No 138
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.90 E-value=3.9e-22 Score=193.14 Aligned_cols=306 Identities=14% Similarity=0.126 Sum_probs=213.9
Q ss_pred HHHHHHHHhhhccCCCCCcccccccCCChHH-HHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 010897 41 AAYQVINDELMLDGNPRLNLASFVTTWMEPE-CDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (498)
Q Consensus 41 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (498)
.++-++.....-..+|.. |+.++|.+++|+ +.+++.+++... ...|...-+..++.+.+++++++++|...... .
T Consensus 18 ~vw~e~~~la~e~~~~~~-LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~--~ 94 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVPNP-LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPD--D 94 (420)
T ss_pred cHHHHHHHHHHhcCCCCc-ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCc--c
Confidence 455555544433344442 688888877665 788888887764 33445555778899999999999888765432 2
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-------CCccccC
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-------EGYYVMN 191 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-------~~~~~~d 191 (498)
.+.+|+|+.+++..+++++.+. +++|++-+|.+.||....+++|..++.|++. ..+|.+|
T Consensus 95 eVlVT~GA~~ai~~~~~~l~~~-------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D 161 (420)
T KOG0257|consen 95 EVLVTAGANEAISSALLGLLNP-------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLD 161 (420)
T ss_pred cEEEecCchHHHHHHHHHHcCC-------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCC
Confidence 3999999999999999988764 6899999999999999999999999999987 4568999
Q ss_pred HHHHHHHhhhCCeEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC----
Q 010897 192 PVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---- 264 (498)
Q Consensus 192 ~~~L~~~i~~~t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~---- 264 (498)
++.|+.+++++|++|+++.|+||||.+ +.|++|++||++| |++++.|++|..++. ...+....-.
T Consensus 162 ~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~------~~lvisDevYe~~v~--d~~~h~r~aslPgm 233 (420)
T KOG0257|consen 162 PEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH------GLLVISDEVYEWLVY--DGNKHIRIASLPGM 233 (420)
T ss_pred hHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEEhhHhHHHhh--CCCcceeeecCCch
Confidence 999999999999999999999999999 4578899999999 999999999988752 2111110001
Q ss_pred CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCch--HHHHHHHHHHHHhcHH--HH
Q 010897 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS--SQIIAQYYQFIRLGFE--GY 340 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~--~~~~a~~~~l~~lg~~--g~ 340 (498)
.++...+...++-++++++.+||++. ++..+......+.+. .++ ++.+. ..+.++...+.....+ .+
T Consensus 234 ~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~------~~~--~~Tp~q~A~a~a~~~~~~~~~p~~~y~ 304 (420)
T KOG0257|consen 234 YERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF------VFT--CPTPIQEASAAAFALELACLQPGGSYF 304 (420)
T ss_pred hheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc------ccc--cCcHHHHHHHHHHhhhhhccCCcchhH
Confidence 23445555555667788999999986 433322221111111 111 11111 1122222222211112 23
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec
Q 010897 341 -KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (498)
Q Consensus 341 -~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (498)
.++.+...++++.|.+.|.+++ +.+..+. +..++...++
T Consensus 305 ~~~~~~~y~~krdil~k~L~~lg-~~v~~p~-gayyl~adfs 344 (420)
T KOG0257|consen 305 ITELVKEYKEKRDILAKALEELG-LKVTGPE-GAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CccccCC-CceEEEEecc
Confidence 4478889999999999999995 8888765 5666665665
No 139
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=5.8e-21 Score=198.04 Aligned_cols=375 Identities=13% Similarity=0.053 Sum_probs=242.8
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHh-ccCCCCC------cCCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDM------DEYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~-~~n~~~~------~~~~~~~~le~~~~~~la~l~g~~ 111 (498)
..++.+.+.++...+ ...++|..- -.++++.+.+++...+ ++...++ .......++|+.+.+...++|+..
T Consensus 19 d~~~~~~i~~e~~~q-~~~l~lias-en~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~ 96 (475)
T PLN03226 19 DPEIADIIEKEKRRQ-WKGLELIAS-ENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD 96 (475)
T ss_pred CHHHHHHHHHHHHHH-HcCeeEecC-CccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC
Confidence 456677775554432 222333221 1145678888888777 5433222 222355788888888899999987
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC------CchhHHHHHHHHcCCeeE----EE
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA------NVQVCWEKFARYFEVELK----EV 181 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~------~~h~~~~~~~~~~g~~~~----~v 181 (498)
... ....+-..+|+.||+.++.++.++ ++.|+..+ .+|.+....++..+.... ..
T Consensus 97 ~~~--~~~nv~~~SG~~AN~av~~aL~~p-------------gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y 161 (475)
T PLN03226 97 PEK--WGVNVQPLSGSPANFAVYTALLQP-------------HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY 161 (475)
T ss_pred cce--eEEecCcCchHHHHHHHHHHhCCC-------------CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee
Confidence 521 001222468899998888777543 46888733 344443333333333322 33
Q ss_pred EecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc
Q 010897 182 KLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (498)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~ 260 (498)
+.+.+++.+|+++|++++.. ++++|++. .+.+|...|+++|.++|+++ |++++||+||+.++.+... ..
T Consensus 162 ~~~~~~g~iD~d~Le~~l~~~~pklIv~~--~S~~s~~~D~a~i~~ia~~~------ga~LlvD~AH~~Gli~~~~--~~ 231 (475)
T PLN03226 162 RLDESTGLIDYDKLEKKAMLFRPKLIIAG--ASAYPRDWDYARMRKIADKV------GALLMCDMAHISGLVAAQE--AA 231 (475)
T ss_pred eecCCCCCcCHHHHHHHHhhcCCeEEEEe--cCcCCCccCHHHHHHHHHHc------CCEEEEEchhhhCcccCCC--CC
Confidence 44555588999999999874 67765443 33468888999999999999 9999999999776542211 11
Q ss_pred cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc---cCc--cCCCCCCccccCCCchHHHHHHHHHHHHh
Q 010897 261 WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH---INY--LGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (498)
Q Consensus 261 ~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~---~~y--l~~~~~~~~l~~sr~~~~~~a~~~~l~~l 335 (498)
. -.+.+|+++.++|||+.+|.| |++++++. .......-. .+| .......+.++++.+...+.++.++++.+
T Consensus 232 ~--p~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 S--PFEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred C--CCCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 1 123699999999999999999 77777543 221100000 011 11111122234555556778888889888
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC--CCC
Q 010897 336 GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN--AEN 413 (498)
Q Consensus 336 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~--~~~ 413 (498)
...+++++.++..+++++|.+.|.+.+ |.++.+....+++.+.+.+ .+++..++.+.|.+.|+.+.....|.. ...
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~-~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~ 385 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRP-LGLTGSRVEKVLDLAHITLNKNAVPGDSSALV 385 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccC-CCCCHHHHHHHHHHCCCEECCCCCCCCcccCC
Confidence 777888889999999999999999965 9998754345777777743 357888899999999998755443321 112
Q ss_pred eeEEEE----eecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 414 VAVLRV----VVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 414 ~~~lRv----~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
...+|+ .++..++.++++++.+.|.++++....
T Consensus 386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~~ 422 (475)
T PLN03226 386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALK 422 (475)
T ss_pred CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 344787 455677889999999999988876433
No 140
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=3.7e-22 Score=201.71 Aligned_cols=282 Identities=18% Similarity=0.134 Sum_probs=200.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++++.+|+.+|++.+ .+++|+|+++++.+++.++..+ ++++|+++.++|..|...++..|+++
T Consensus 64 ~Lr~aia~~~~~~~~-----~I~it~Gs~~~i~~~~~~~~~~------------g~d~vlv~~P~y~~y~~~~~~~g~~v 126 (354)
T PRK04635 64 ELINAYSAYAGVAPE-----QILTSRGADEAIELLIRAFCEP------------GQDSIACFGPTYGMYAISAETFNVGV 126 (354)
T ss_pred HHHHHHHHHhCcCHH-----HEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 455668888898763 3999999999999988877432 12689999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~ 258 (498)
+.+|++++ +.+|++.++. + ++|++|++++|+||||.+.|.+++.++++... +++|++|++|..+... .
T Consensus 127 ~~v~~~~~-~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~-----~~~vivDeay~~~~~~----~ 194 (354)
T PRK04635 127 KALPLTAD-YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP-----DAIVVVDEAYIEFCPE----Y 194 (354)
T ss_pred EEEecCCC-CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC-----CcEEEEeCchHhhccC----c
Confidence 99999764 7899998873 4 57999999999999999999999999998853 6999999999876421 1
Q ss_pred Ccccc--CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh
Q 010897 259 LEWDF--RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (498)
Q Consensus 259 ~~~~~--~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l 335 (498)
...++ ..+++ .+.-+.+|++ +++.++||++.+. +.+ +.+. .....+ + .....+.+++..+
T Consensus 195 s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~-~~l~-------~~~~~~----~---~~~~~~~~a~~~l 257 (354)
T PRK04635 195 SVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELI-EILM-------RVIAPY----P---VPLPVSEIATQAL 257 (354)
T ss_pred chHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHH-HHHH-------hhcCCC----C---CCHHHHHHHHHHH
Confidence 11111 12344 4466888976 4778899988542 222 1110 000011 1 1122334444444
Q ss_pred cH---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCC
Q 010897 336 GF---EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAE 412 (498)
Q Consensus 336 g~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~ 412 (498)
.. +.+++..+...+.++++.+.|++++++++..+ ..+++.++++ +..++.+.|.++|+.++.+..+ .
T Consensus 258 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~~~~-----~~~~~~~~l~~~gv~v~~~~~~---~ 327 (354)
T PRK04635 258 SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG--NGNYVLAKFD-----DVDAVFKALWDAGIVARAYKDP---R 327 (354)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCcEEEEECC-----CHHHHHHHHHHCCEEEEECCCC---C
Confidence 32 33455666777788999999999876776643 4577777763 3568889999999988654221 2
Q ss_pred CeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 413 NVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 413 ~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
..+++|++++ +.+++++|+++|++
T Consensus 328 ~~~~lRis~~---~~e~~~~l~~al~~ 351 (354)
T PRK04635 328 LANCIRFSFS---NRAETDKLIGLIRN 351 (354)
T ss_pred CCCeEEEEeC---CHHHHHHHHHHHHH
Confidence 3457999987 78999999888864
No 141
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=198.87 Aligned_cols=318 Identities=13% Similarity=0.058 Sum_probs=221.1
Q ss_pred CChHHHHHHHHHHhcc---CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~---n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
++++.+.+++.+++.. ....|. .++...+++.+.+++.+..|.+.+. ..+++|+|+++++.+++.++.++
T Consensus 39 ~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~---~~I~it~G~~~~l~~~~~~~~~~--- 111 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTV---ENVWAANGSNEILQQLLQAFGGP--- 111 (368)
T ss_pred CCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCCh---hhEEECCCHHHHHHHHHHHhcCC---
Confidence 5667888888877643 222332 2466778888888888777765432 24899999999999988887543
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHH
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~ 222 (498)
++.|+++.++|..+..+++..|++++.++.+++ +.+|++++++++.. ++++|+++.|+||||.+.+.+
T Consensus 112 ----------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~ 180 (368)
T PRK03317 112 ----------GRTALGFVPSYSMHPIIARGTHTEWVEGPRAAD-FTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180 (368)
T ss_pred ----------CCEEEEeCCChHHHHHHHHhcCCeeEEcccCCC-CCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 468999999999999999999999888887654 78999999999874 678899999999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc--CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~--~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~ 299 (498)
++.++++.+ ++++++|++|+++.. ......... ..++ .++..+..|.+ +++.++||++.. ++.. ..
T Consensus 181 ~l~~l~~~~------~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~~-~i~~~SfSK~~g~~GlRiG~~~~~-~~~~-~~ 249 (368)
T PRK03317 181 DVEAILDAA------PGIVVVDEAYAEFRR--SGTPSALTLLPEYPR-LVVSRTMSKAFAFAGGRLGYLAAA-PAVV-DA 249 (368)
T ss_pred HHHHHHHHC------CceEEEeCCchhhcc--cCCcCHHHHHHhCCC-EEEEEechhhhccchhhhhhhhCC-HHHH-HH
Confidence 999999999 899999999998641 110000111 1122 23444778866 467889999853 2221 11
Q ss_pred cccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 300 ~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
+. .....+. . ..+.|.++...+. .+.+.+.+++..+.++++.+.|++.+ +.+..+ ..+++.|
T Consensus 250 l~-------~~~~~~~--~-----s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~ 312 (368)
T PRK03317 250 LR-------LVRLPYH--L-----SAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELG-LRVAPS--DANFVLF 312 (368)
T ss_pred HH-------hcCCCCC--C-----CHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCC--CCcEEEE
Confidence 11 0001111 1 1233444443442 23455666777778888999998875 776543 4666666
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 379 SLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.-. .+..++.+.|.++|+.+..+. ...++|++++ +.++++++++.|+++++.
T Consensus 313 ~~~----~~~~~~~~~l~~~Gv~v~~~~------~~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 313 GRF----ADRHAVWQGLLDRGVLIRDVG------IPGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred ecc----CCHHHHHHHHHHCCEEEEeCC------CCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 221 146789999999999876432 1357999987 678999999999888753
No 142
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.90 E-value=4.8e-22 Score=200.31 Aligned_cols=332 Identities=14% Similarity=0.053 Sum_probs=222.1
Q ss_pred cCCChHHHHHHHHHHhc----cCCCCCc---CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHH-HHHH
Q 010897 65 TTWMEPECDKLVMASIN----KNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML-AGLA 136 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~----~n~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~l-a~~a 136 (498)
|+..++.+.+++...+. .....+. ..+...++-+++++.+++++|.+.+ ..++++.|++.+.+- +++.
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN----YKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEEcCCchHHHHHHHHh
Confidence 55567888888877652 1122222 2334457888999999999998542 236666555544443 3333
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHH-HhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~-~i~~~t~~v~~~~~~t~t 215 (498)
+..+ |. +...|+.+..+|- +.+.++..|.. ..+..++..+..+..++++ .+++++++|.+++..|+|
T Consensus 87 l~~~--------g~--~~l~i~~G~fg~r-~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTst 154 (360)
T PRK05355 87 LLGG--------GK--KADYVDTGSWSKK-AIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETID 154 (360)
T ss_pred cCCC--------CC--eEEEEECCHHHHH-HHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcc
Confidence 3221 10 0123333334443 46677888865 6666653223455555555 788889999999999999
Q ss_pred cccc-CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 216 GEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 216 G~~~-~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
|... |+.+| + +++++||++++.+..|+. + ...|++.+++||++ +|+|+|+++++++.
T Consensus 155 Gv~~~~i~~i------~------g~l~vVDavss~g~~~id-------v--~~~d~~~~ssqK~l-gP~Glg~l~~s~~~ 212 (360)
T PRK05355 155 GTEFHELPDT------G------DVPLVADMSSDILSRPID-------V--SKFGLIYAGAQKNI-GPAGLTIVIVREDL 212 (360)
T ss_pred eEecCccccc------C------CCcEEEEcCccccCccCC-------H--HHccEEEEeccccc-cCCceEEEEECHHH
Confidence 9997 77766 7 999999999987765442 2 23569999999987 59999999998753
Q ss_pred CCCcccccccCccCCC--CCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-
Q 010897 295 DLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKD- 370 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~--~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~- 370 (498)
. .........|+... .......+|.+...+.++..+|+.+..+ |++++.++..++++++++.|+++|.+..+.++
T Consensus 213 l-~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 291 (360)
T PRK05355 213 L-GRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPE 291 (360)
T ss_pred H-hhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChh
Confidence 2 11111011111110 1111233788888899999999999888 89999999999999999999999833333321
Q ss_pred CCc-cEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 371 VGV-PLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 371 ~~~-~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+. .+++|++++. .+..++.+.+.++|+++.... ...+.+|+|+...+|.+|+++|++.|++++.
T Consensus 292 ~rs~~v~sf~~~~~--~~~~~~~~~~~~~Gi~~~~~~-----~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 292 DRSRMNVPFTLADE--ELDKKFLAEAKAAGLVGLKGH-----RSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred hcCCcEEEEEcCCh--HHHHHHHHHHHHCCCcccCCC-----CccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 234 5799998542 343577788888998852221 1235799999999999999999999998764
No 143
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.90 E-value=1.2e-21 Score=196.54 Aligned_cols=302 Identities=17% Similarity=0.095 Sum_probs=211.4
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecC-hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEE---EcCCchhH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV---TGANVQVC 166 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv---~s~~~h~~ 166 (498)
+...++-+++++.++++++.+.+ ..++++.| ||+|+-.++..+..+ +.+++ ....+| .
T Consensus 33 ~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgT~a~ea~~~nl~~~-------------~~~~l~i~~G~fg~-r 94 (349)
T TIGR01364 33 KEFEAVANEAESDLRELLNIPDN----YEVLFLQGGATGQFAAVPLNLLAE-------------GKVADYIVTGAWSK-K 94 (349)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcCCC-------------CCeEEEEECCHHHH-H
Confidence 34457778899999999998542 23666665 999988777766432 12232 233333 4
Q ss_pred HHHHHHHcCCeeEEEEecCC---ccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 167 WEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 167 ~~~~~~~~g~~~~~v~~~~~---~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
+.+.|+..|+ +..+..++. .-.+|++.++ +++++++|.+++..|+||...| ++++.+ +++++|
T Consensus 95 ~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~------~~l~iV 160 (349)
T TIGR01364 95 AAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVK------NAPLVA 160 (349)
T ss_pred HHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccC------CCeEEE
Confidence 5677888999 888776521 1145666554 3567899999999999999876 677778 999999
Q ss_pred ecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC--CCCccccCCCc
Q 010897 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--QPTFTLNFSKG 321 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~--~~~~~l~~sr~ 321 (498)
|++++.+..|+. + ...|++.+++||++ +|+|+|+++++++.. ....+....|.... .......+|.+
T Consensus 161 Davss~g~~~id-------~--~~~d~~~~ssqK~l-gP~Glg~l~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Tp~ 229 (349)
T TIGR01364 161 DMSSNILSRPID-------V--SKFGLIYAGAQKNI-GPAGLTVVIVRKDLL-GRASRITPSMLNYKIHAENDSMYNTPP 229 (349)
T ss_pred EccccccCccCC-------H--HHccEEEEeccccc-CCCceEEEEECHHHH-hhcccCCCCcchHHHHHhcCCCCCCCc
Confidence 999987765442 2 23569999999987 499999999987522 11101111222100 01112336888
Q ss_pred hHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC-C-CCc-cEEEEEecCCCCCCHHHHHHHHHh
Q 010897 322 SSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSK-D-VGV-PLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 322 ~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~-~~~-~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
...++++..+|+.+..+ |++++.++..++++++.+.|++++++..... + ... .+++|.+++. .+ ..++.+.+.+
T Consensus 230 ~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~-~~-~~~~~~~~~~ 307 (349)
T TIGR01364 230 TFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE-EL-EKRFLKEAEE 307 (349)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-hH-hHHHHHHHHH
Confidence 88889999999999888 7999999999999999999999977755532 1 134 5688988642 22 2577778888
Q ss_pred cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 398 FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 398 ~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+|+.+..... ..+.+|+|+...+|.+|+++|++.|+++++
T Consensus 308 ~Gi~~~~~~~-----~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 308 RGLVSLKGHR-----SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred CCCcccCCcc-----ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 9985433211 135799999999999999999999998654
No 144
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=3.7e-21 Score=195.42 Aligned_cols=320 Identities=14% Similarity=0.053 Sum_probs=217.4
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.+..... |.. +... .+++.+++.++++++ .+++|+|+++++.+++.++.++
T Consensus 45 ~~~~~~~~a~~~~~~~~~~-Y~~-~~~~----~Lr~~ia~~~~~~~~-----~I~it~G~~~~l~~~~~~~~~~------ 107 (369)
T PRK08153 45 GPSPSVIAAMREAAAEIWK-YGD-PENH----DLRHALAAHHGVAPE-----NIMVGEGIDGLLGLIVRLYVEP------ 107 (369)
T ss_pred CCCHHHHHHHHHHHHHhhc-CCC-CccH----HHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------
Confidence 5567788888776643221 221 1223 455557777887652 3999999999998887776432
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHh-hhCCeEEEEeeccCCcccccCHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i-~~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
++.|++++++|..+...++.+|++++.+|++++ .+|++++.+.+ +.++++|++++|+||||.+.+.+++.
T Consensus 108 -------gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~ 178 (369)
T PRK08153 108 -------GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD--REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIV 178 (369)
T ss_pred -------CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 478999999999999888999999999998654 48999988766 45788999999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
++++.+.+ +++|++|++|+.+.. ........-..+++ ++..+..|.+ +++.++||++... +.. +.+...
T Consensus 179 ~l~~~~~~----~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~-i~~~SfSK~~g~~GlRiG~~v~~~-~~~-~~l~~~- 248 (369)
T PRK08153 179 AFIEALPE----TTLLVLDEAYCETAP--AGAAPPIDTDDPNV-IRMRTFSKAYGLAGARVGYAIGAP-GTI-KAFDKV- 248 (369)
T ss_pred HHHHhCCC----CcEEEEeCchhhhcC--cccchhhhhcCCCE-EEEecchHhccCcchheeeeecCH-HHH-HHHHHh-
Confidence 99886532 789999999987642 11001111112333 4455666765 5888999998532 221 111100
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
...+ + ...++|+++...+... -+++..+...++++++.+.|++.+ +.+.+ ...+++.+.++.
T Consensus 249 ------~~~~----~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~p--~~~~f~~~~~~~- 311 (369)
T PRK08153 249 ------RNHF----G---MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPLP--SATNFVAIDCGR- 311 (369)
T ss_pred ------hcCC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC--CcCcEEEEECCC-
Confidence 0111 1 2334566556555433 345666667778888999998875 66442 356777776632
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
+......+.++|.++|+.+.. |.......++|++++ +.+++++|+++|++++..++
T Consensus 312 ~~~~a~~l~~~l~~~Gi~v~~---p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 312 DGAFARAVLDGLIARDIFVRM---PGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred CcccHHHHHHHHHHCCeEEee---CCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 234567999999999998742 111123468999997 78999999999999887554
No 145
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.1e-21 Score=196.12 Aligned_cols=342 Identities=13% Similarity=0.011 Sum_probs=224.0
Q ss_pred CcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a 136 (498)
+++..+.+.. +++.+.+.+.+++......|....+..++++.+.+++++.+|.+... ..+++|+|+++|+.+++.+
T Consensus 36 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~---~~i~~t~G~~~al~~~~~~ 112 (402)
T PRK06107 36 VDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD---NEITVGGGAKQAIFLALMA 112 (402)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHHHHHHH
Confidence 3444444443 35678888888876554556555678899999999999988886432 2389999999999888876
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeeccCCc
Q 010897 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (498)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t 215 (498)
...+ ++.|++++++|..+..++...+..++.++++ ++++.+|++++++++.+++++|++++|+|||
T Consensus 113 ~~~~-------------gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 179 (402)
T PRK06107 113 TLEA-------------GDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPT 179 (402)
T ss_pred hcCC-------------CCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCC
Confidence 5332 4689999999988888888889888888886 3457899999999998889999999999999
Q ss_pred ccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC----CCCeeEEEEcCCccCC-CCCCeEE
Q 010897 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVSGHKYGL-VYAGVGW 287 (498)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~----~~~~dsi~~s~hK~l~-~p~g~g~ 287 (498)
|.+.+ +++|+++|++++ ++++++|++|+.+.. ..+....... ...-..+..|.+|.++ ++.++||
T Consensus 180 G~~~s~~~~~~l~~~a~~~~-----~~~iI~De~y~~l~~--~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~ 252 (402)
T PRK06107 180 GAVYSRAELRALADVLLRHP-----HVLVLTDDIYDHIRF--DDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY 252 (402)
T ss_pred CcCcCHHHHHHHHHHHHHcC-----CeEEEEehhcccccc--CCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceee
Confidence 98865 566677788853 799999999987531 1111110111 1112344456789874 7788999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
++... +.+ +.+.....+.. . ....+.|+++...+ +....++..+.+.++++.+.+.|++++++.
T Consensus 253 ~~~~~-~~~-~~~~~~~~~~~---------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~ 318 (402)
T PRK06107 253 AAGPA-DLI-AAINKLQSQSS---------S---CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLS 318 (402)
T ss_pred eecCH-HHH-HHHHHHHHhcc---------c---CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 87432 221 11111001000 0 12334455555555 233455666777788888999999886676
Q ss_pred EeeCCCCccEEEE-EecC------CCC---CCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHH
Q 010897 366 ILSKDVGVPLVAF-SLKD------SSA---HTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 366 ~~~~~~~~~~v~f-~~~~------~~~---~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
+..+ ..++..| +++. +.+ .+..+++++| .++|+.+.....- ....++|+++.. +.+++++.+
T Consensus 319 ~~~p--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F---g~~~~iRis~~~--~~e~l~~~l 391 (402)
T PRK06107 319 CLVP--DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY---GLSPYFRLSIAT--SLETLEEAC 391 (402)
T ss_pred ccCC--CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc---CCCCeEEEEeCC--CHHHHHHHH
Confidence 6543 3444444 5421 111 2456777665 5679887543211 113589999984 577777777
Q ss_pred HHHHHHHHH
Q 010897 435 SHIEEVLKE 443 (498)
Q Consensus 435 ~~l~~~l~~ 443 (498)
+.|.+++++
T Consensus 392 ~~l~~~l~~ 400 (402)
T PRK06107 392 ARIERAVAA 400 (402)
T ss_pred HHHHHHHHh
Confidence 777666654
No 146
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=2.9e-21 Score=192.34 Aligned_cols=332 Identities=20% Similarity=0.124 Sum_probs=240.8
Q ss_pred CCCcccccc--cCCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHH
Q 010897 56 PRLNLASFV--TTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (498)
Q Consensus 56 p~~~~~~~~--~~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~ 130 (498)
+.+|+.|+- ....+|.+.+++.+++.........+. +...+..++.+.||+++|.+. .++.++|-.||
T Consensus 40 ~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~-------al~f~SGy~AN 112 (388)
T COG0156 40 KVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA-------ALLFSSGFVAN 112 (388)
T ss_pred eeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEEcccchhH
Confidence 334445422 333467888888888887544333332 556666677777999999985 67777788888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---C---Ce
Q 010897 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---N---TI 204 (498)
Q Consensus 131 ~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~---t~ 204 (498)
+-.+-++..+ ++.|+..+..|.|+...+++.+++++.++- .|+++|++.+.+ + .+
T Consensus 113 ~~~i~~l~~~-------------~dli~~D~lnHASiidG~rls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 113 LGLLSALLKK-------------GDLIFSDELNHASIIDGIRLSRAEVRRFKH------NDLDHLEALLEEARENGARRK 173 (388)
T ss_pred HHHHHHhcCC-------------CcEEEEechhhhhHHHHHHhCCCcEEEecC------CCHHHHHHHHHhhhccCCCce
Confidence 7666666443 578999999999999999999999888873 678999999976 2 35
Q ss_pred EEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc---cccCCC--CeeEEEEcCCccC
Q 010897 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRLP--LVKSINVSGHKYG 279 (498)
Q Consensus 205 ~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~---~~~~~~--~~dsi~~s~hK~l 279 (498)
+|+.-..-...|.+.|+++|.+++++| +++++||+||+.++. .+..+ ..+++. .+|++..+..|.+
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky------~a~L~VDEAHa~Gv~---G~~GrG~~e~~g~~~~~vdi~~gTlsKAl 244 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKY------GALLYVDEAHAVGVL---GPNGRGLAEHFGLEPEEVDIIVGTLGKAL 244 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHh------CcEEEEEcccccccc---CCCCccHHHHhCCCCccceEEEEEchhhh
Confidence 555555555679999999999999999 999999999998763 33222 123333 3689999999988
Q ss_pred CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010897 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (498)
Q Consensus 280 ~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 359 (498)
++ .|.++..+.. + .+|+......|.+..+-++..+.+...+++.+.. ..++.+++.++..++.+.++
T Consensus 245 Gs---~Gg~v~g~~~-~-------~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~--~~~~r~~L~~~~~~~~~~~~ 311 (388)
T COG0156 245 GS---SGGYIAGSAA-L-------IDYLRNRARPFIFSTALPPAVAAAALAALRILEE--GPERRERLQELAAFFRSLLK 311 (388)
T ss_pred cc---cCceeeCcHH-H-------HHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHH
Confidence 63 3444434432 1 2344443344444345555666667777776653 35777888889999997777
Q ss_pred cCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
..+ +.+.+. ..+++.+.+.+ .....++...|.++|+.+.....|++..+...||++++..+|.++++++++.+.+
T Consensus 312 ~~~-~~~~~s--~s~I~pv~~gd--~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 312 ALG-LVLLPS--ESPIIPVILGD--EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred hcC-CccCCC--CCCeeeeEeCC--HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 766 665433 57888877743 2346789999999999999999999888899999999999999999999888876
Q ss_pred H
Q 010897 440 V 440 (498)
Q Consensus 440 ~ 440 (498)
+
T Consensus 387 ~ 387 (388)
T COG0156 387 V 387 (388)
T ss_pred h
Confidence 4
No 147
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=6.4e-21 Score=196.26 Aligned_cols=329 Identities=14% Similarity=0.068 Sum_probs=218.6
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
..+|++.+++.+.+++.......++ +......++.+.+++++|.+. .+++++|++|+..++.++...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~SG~~An~~ai~~l~~~--- 128 (406)
T PRK13393 59 GQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA-------ALLFTSGYVSNWAALSTLGSR--- 128 (406)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhhcC---
Confidence 3578899999888876433221111 233456677788999998753 677777788998888765331
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCccccc
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~ 219 (498)
..++.|+++...|.++...++..|.+++.++. .|++.+++.+. +++++|++..+++++|.+.
T Consensus 129 --------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 129 --------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred --------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 01357888889999999999988888776653 36677777664 3578888999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecCccccc-ccccCCCCccccC-CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFI-APFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~-~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
|+++|.++|+++ ++++++|+||+.+. .+.... .....+ .+.+|.+..+..|.+..+ | |+++. +++..
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~g~~g~~G~g-~~~~~~~~~~~~i~~~tlsKa~g~~-G-G~~~~-~~~~~- 263 (406)
T PRK13393 195 PIAEICDVAEKH------GAMTYLDEVHAVGLYGPRGGG-IAEREGLADRLTIIEGTLAKAFGVM-G-GYITG-SAALC- 263 (406)
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccccCCCCCc-hhhhcCCCCCCeEEEEeCchhhccc-C-ceeeC-CHHHH-
Confidence 999999999999 99999999998433 221110 000111 133677777888887543 3 66542 22211
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
+. +......+...++.+.....+..++++.+...+ ...++..+++++|.+.|++++ ++++.+ ..+++.
T Consensus 264 ~~-------l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~i~~ 331 (406)
T PRK13393 264 DF-------IRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAG-IPHLPN--PSHIVP 331 (406)
T ss_pred HH-------HHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcC-CCcCCC--CCCeEE
Confidence 11 111111111123333344555667776554333 223566788999999998875 666533 466777
Q ss_pred EEecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 378 FSLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.+.+ ..+..++.++|.+ +|+.++....|....+..++|++++..+|.++++++++.|+++++.+
T Consensus 332 v~~~~--~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 332 VMVGD--PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEeCC--HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 76532 1245689999987 59988766555444455789999999999999999999999987653
No 148
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=5.8e-21 Score=194.07 Aligned_cols=292 Identities=13% Similarity=0.026 Sum_probs=192.1
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH
Q 010897 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (498)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~ 171 (498)
+...+.+++++.+++++|.+. .++.++|+.+++ ++...... +++.|+++...|.+....+
T Consensus 53 g~~~~~~~~e~~la~~~~~~~-------~l~~~sG~~a~~-~~~~~~~~------------~~d~ii~d~~~H~sv~~~~ 112 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAPE-------AFIVPSGYMANL-GLCAHLSS------------VTDYVLWDEQVHISVVYSL 112 (370)
T ss_pred CChHHHHHHHHHHHHHhCCCe-------EEEECChHHHHH-HHHHHhCC------------CCCEEEEEhhhhHHHHHHH
Confidence 356677788999999999964 455555666764 32222110 1367888899999999998
Q ss_pred HHcCCeeEEEEecCCccccCHHHHHHHhhh------CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 172 ~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
+........++ ..|+++|+++++. ++++|+++++++++|.+.|+++|.++|+++ ++++|||+
T Consensus 113 ~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~------~~~livDe 180 (370)
T PRK05937 113 SVISGWHQSFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY------HAHLIVDE 180 (370)
T ss_pred HHcCCceEEec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 87653322221 3689999998873 466777899999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc-ccCccCCCCCCccccCCCchHH
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~-~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
||+.+..+.........++.++.+.+..+.+|.+ ++.|.|+++.++ .. ..+.. ...|. ..++.+...
T Consensus 181 a~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~--~~-~~~~~~~~~~~--------~s~~~~~~~ 248 (370)
T PRK05937 181 AHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSSE--VK-QDLMLNSPPLR--------YSTGLPPHL 248 (370)
T ss_pred CccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCHH--HH-HHHHHhCCCCe--------ecCCCCHHH
Confidence 9986543322111111122333344556777976 567877665322 11 11110 01111 112333345
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeee
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPA 404 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~ 404 (498)
+.++.++++.+..++ ....++..+++++|.+.|...+ . ...+.|.+++ .+...+.+.|.++|+.+..
T Consensus 249 ~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~------~---~~~~~i~~~~---~~~~~~~~~L~~~gi~v~~ 315 (370)
T PRK05937 249 LISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA------P---GCVQPIFLPG---ISEQELYSKLVETGIRVGV 315 (370)
T ss_pred HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC------C---CCEEEEEeCC---hhHHHHHHHHHHCCeeEEe
Confidence 666677777775555 3456778888888888775432 0 1122344532 3456899999999998876
Q ss_pred ecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 405 YTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 405 ~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.+.|. ..++|++++..+|.+|++++++.|++++++.
T Consensus 316 ~~~~~----~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 316 VCFPT----GPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred eCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 55442 2469999999999999999999999987654
No 149
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=5.4e-21 Score=192.92 Aligned_cols=311 Identities=16% Similarity=0.081 Sum_probs=205.5
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.++.. ..|....+..+ +++++++.+|.+++ .+++|+|+++++.+++. + .
T Consensus 35 ~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~----lr~aia~~~~~~~~-----~I~it~Ga~~al~~~~~-l-~------- 95 (349)
T PRK07908 35 TPPEWLRERLAARLGDL-AAYPSTEDERR----ARAAVAARHGRTPD-----EVLLLAGAAEGFALLAR-L-R------- 95 (349)
T ss_pred CCCHHHHHHHHHHhhHh-hcCCCccchHH----HHHHHHHHhCcChh-----hEEECCCHHHHHHHHHh-c-C-------
Confidence 45677888888776542 22332234333 45557777887653 39999999999987665 2 1
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
.+.+++..+++..+...++..|++++.+|++++ +.+|++++ .++++++++++|+||||.+.+.++|.+
T Consensus 96 -------~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~~ 163 (349)
T PRK07908 96 -------PRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLLA 163 (349)
T ss_pred -------CCeEEEeCCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHHH
Confidence 135677789999999999999999999999865 78999855 456889999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccC
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHIN 305 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~ 305 (498)
+|+ + +.++++|++|+.++.. ..+... ....++ ..+..|.+|.+ +++.++||++.+. +.+ +.+...
T Consensus 164 l~~-~------~~~iIvDe~y~~~~~~-~~~~l~-~~~~~~-~i~i~S~SK~~~l~GlRiG~~~~~~-~~~-~~~~~~-- 229 (349)
T PRK07908 164 LRR-P------GRILVVDEAFADAVPG-EPESLA-GDDLPG-VLVLRSLTKTWSLAGLRVGYALGAP-DVL-ARLTRG-- 229 (349)
T ss_pred HHh-c------CCEEEEECcchhhccC-Cccccc-cccCCC-EEEEeecccccCCccceeeeeecCH-HHH-HHHHhc--
Confidence 995 4 6788899999876421 111111 112223 23334778855 5888899999542 222 211110
Q ss_pred ccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCC
Q 010897 306 YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA 385 (498)
Q Consensus 306 yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~ 385 (498)
. ..+ .-+.....+....+.-...+.+++..++..++++++.+.|+++ ++++..++ +.+++.+++++
T Consensus 230 -~----~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~-~g~~~~~~~~~--- 295 (349)
T PRK07908 230 -R----AHW----PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPA-AAPFVLVRVPD--- 295 (349)
T ss_pred -C----CCC----CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCC-CceEEEEECCc---
Confidence 0 011 1111111111111111122345667777888999999999988 48776544 67888888742
Q ss_pred CCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
...+.+.|.++|+.+.....- ...+..++|++++ +.+++++|+++|++++.
T Consensus 296 --~~~~~~~l~~~gI~v~~g~~f-~~~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 --AELLRKRLRERGIAVRRGDTF-PGLDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred --HHHHHHHHHhCCEEEEECCCC-CCCCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 458888999999887643211 1123578999996 67899999999988764
No 150
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=5.6e-21 Score=194.49 Aligned_cols=329 Identities=10% Similarity=0.047 Sum_probs=218.6
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH-HHHHHHHHhc
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQKRKEQ 148 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~-~~~~~~~~~~ 148 (498)
++..+++.+++..+...+ .|...++|++ +++++|.+. .+.++||++|+.+++.++. .
T Consensus 14 ~~e~~~~~~~l~~~~~~~--g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~lal~al~~~--------- 71 (379)
T PRK11658 14 DEELAAVKEVLRSGWITT--GPKNQALEQA----FCQLTGNQH-------AIAVSSATAGMHITLMALGIG--------- 71 (379)
T ss_pred HHHHHHHHHHHHcCCccC--CHhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC---------
Confidence 444666777777655432 4455555555 888888864 7888999999999888762 2
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la 228 (498)
.+++|++++++|.++..++...|++++.++++.+++.+|+++++++++++|++|+ +++++|...|+++|.++|
T Consensus 72 ----~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a 144 (379)
T PRK11658 72 ----PGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIG 144 (379)
T ss_pred ----CCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHH
Confidence 1479999999999999999999999999999876688999999999999998876 556799999999999999
Q ss_pred HHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc-cC-c
Q 010897 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-IN-Y 306 (498)
Q Consensus 229 ~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~-~~-y 306 (498)
+++ |+++++|+|++.+.. .... ..+..++++++++++|.+.++. .|++++++++...+..... .. +
T Consensus 145 ~~~------gi~vi~D~a~a~g~~--~~~~---~~g~~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~~~~~~~~~~G~~ 212 (379)
T PRK11658 145 ERY------GIPVIEDAAHAVGTY--YKGR---HIGARGTAIFSFHAIKNITCAE-GGLVVTDDDELADRLRSLKFHGLG 212 (379)
T ss_pred HHc------CCeEEEECCCccCCe--ECCe---ecCCCCCEEEeCCCCCcCcccC-ceEEEECCHHHHHHHHHHHHcCCC
Confidence 999 999999999985432 1111 1222345788899999886543 4666655554321111111 00 0
Q ss_pred cC-------CCCCCcc--ccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC----Cc
Q 010897 307 LG-------SDQPTFT--LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----GV 373 (498)
Q Consensus 307 l~-------~~~~~~~--l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----~~ 373 (498)
.. .....+. ..|.. ..+..+.+++.....+++.+..++..++++++.+.|++++...+..+.. ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~G~n--~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~ 290 (379)
T PRK11658 213 VDAFDRQTQGRAPQAEVLTPGYK--YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAW 290 (379)
T ss_pred cchhhhhcccCCCcceeeccccc--cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeE
Confidence 00 0000000 00111 1223444555555567788999999999999999999887322222211 12
Q ss_pred cEEEEEecCC-CCCCHHHHHHHHHhcCcEeeeecCCCCCC------------------CeeEEEEeecCCCCHHHHHHHH
Q 010897 374 PLVAFSLKDS-SAHTVFEISEGLRKFGWIVPAYTMPANAE------------------NVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 374 ~~v~f~~~~~-~~~~~~~l~~~L~~~G~~v~~~~~~~~~~------------------~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
.+++++++.. .+.+..++.++|.++|+....+..|.... ....+-+-++...|.+++++++
T Consensus 291 ~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~ 370 (379)
T PRK11658 291 HLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVI 370 (379)
T ss_pred EEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHH
Confidence 3555666422 24577899999999998654332221110 1133445456678889999888
Q ss_pred HHHHHHH
Q 010897 435 SHIEEVL 441 (498)
Q Consensus 435 ~~l~~~l 441 (498)
+.|++++
T Consensus 371 ~~i~~~~ 377 (379)
T PRK11658 371 TALQQIA 377 (379)
T ss_pred HHHHHHH
Confidence 8888765
No 151
>PRK09148 aminotransferase; Validated
Probab=99.89 E-value=3.6e-20 Score=190.51 Aligned_cols=345 Identities=14% Similarity=0.024 Sum_probs=216.8
Q ss_pred CCCcccccccC-CChHHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHH
Q 010897 56 PRLNLASFVTT-WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (498)
Q Consensus 56 p~~~~~~~~~~-~~~~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la 133 (498)
+.+++....+. ++++.+.+.+.+.++.. ...|....+..++++.+.+++.+.+|.+.+.+ ..+++|+|+++++.++
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~G~~~al~~~ 108 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPD--TQVVATLGSKEGFANM 108 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEcCChHHHHHHH
Confidence 33444444443 33566667677666432 23344445678899998888888778653221 1389999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC-ccccCHHHHHHHhhhCCeEEEEeecc
Q 010897 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGS 212 (498)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~L~~~i~~~t~~v~~~~~~ 212 (498)
+.++..+ ++.|++++++|..+...++..|++++.++++++ .+..+++++.+...+++++|++++|+
T Consensus 109 ~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~ 175 (405)
T PRK09148 109 AQAITAP-------------GDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPS 175 (405)
T ss_pred HHHhcCC-------------CCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCC
Confidence 8877542 478999999999999899999999999998743 24344444444444678999999999
Q ss_pred CCcccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccCC-CCCCe
Q 010897 213 TLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGV 285 (498)
Q Consensus 213 t~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l~-~p~g~ 285 (498)
||||.+.+. ++|.++|+++ +++|++|++|+.+.. ...... ..+ ......++..|..|.++ ++.++
T Consensus 176 NPtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~ 247 (405)
T PRK09148 176 NPTAYVADLDFYKDVVAFAKKH------DIIILSDLAYSEIYF--DGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRM 247 (405)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhhc--CCCCCCChhhCCCccCcEEEEeccccccCCcchhe
Confidence 999999876 5688889999 999999999998642 111000 011 11233445677888764 78899
Q ss_pred EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 286 g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
||++. +++.+ +.+.....+.. .+ ...+.|.++...+. ..-.++..+...++++++.+.|++.+
T Consensus 248 G~~v~-~~~~i-~~l~~~~~~~~---------~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~- 312 (405)
T PRK09148 248 GFAVG-NERLI-AALTRVKSYLD---------YG---AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG- 312 (405)
T ss_pred eeeeC-CHHHH-HHHHHHHHHhc---------cC---CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99984 32221 11111011110 00 11234444454453 23345666777788889999999875
Q ss_pred eEEeeCCCCccEEEEEecCC-CCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAFSLKDS-SAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~-~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+.+..+ .+..++.+++++. ...+..++++.|. ++|+.+....... ..+..++|+++.. ..+++++.++.|.+++
T Consensus 313 ~~~~~p-~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ri~~~~--~~~~l~~al~~l~~~l 388 (405)
T PRK09148 313 WDIPPP-AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG-EHGDGYVRIALVE--NEQRIRQAARNIKRFL 388 (405)
T ss_pred CccCCC-CeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 654433 2455666677532 1234678888865 6898775432211 1234689999862 4455544444444444
Q ss_pred H
Q 010897 442 K 442 (498)
Q Consensus 442 ~ 442 (498)
+
T Consensus 389 ~ 389 (405)
T PRK09148 389 S 389 (405)
T ss_pred H
Confidence 3
No 152
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.89 E-value=1.9e-21 Score=196.24 Aligned_cols=331 Identities=14% Similarity=0.040 Sum_probs=222.5
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeee-cChhHHHHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~g~sea~~la~~a~~~~~~~ 143 (498)
|...++.+.+++......-.......+...++-+++++.+++++|.+.+ ..++++ .++|.++..++..+...
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~f~~gs~T~a~~~~~~~l~~~--- 83 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG----YEVILGNGGATAFWDAATFGLIEK--- 83 (361)
T ss_pred CcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchhHHHHHHHHhcccc---
Confidence 3344677777655221111101134456677888999999999999642 236775 55999998888766321
Q ss_pred HHHhcCCCCCCcEEEEcCCchh-HHHHHHHHc--CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC
Q 010897 144 KRKEQGKPYDKPNIVTGANVQV-CWEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~-~~~~~~~~~--g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~ 220 (498)
..++++...|. .+...+.+. +.+++.++++++ ..++. .++++|++|++++.+|.||.+.|
T Consensus 84 -----------~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~lV~~~h~et~tG~~~p 146 (361)
T TIGR01366 84 -----------KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG-SAPEP-----QADPGVDVIAWAHNETSTGVAVP 146 (361)
T ss_pred -----------cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC-CCCCC-----ccCCCCCEEEEcccCCccceecc
Confidence 23344444454 455555542 237777877643 33443 35678999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccc
Q 010897 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~ 300 (498)
+++| ++++ |++++||++++.+..|. |+. .+|++.+++||++++|.|.++++++++. +.+..
T Consensus 147 i~~I---~~~~------g~~~iVDavqs~g~~~i-------dv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~-~~~~~ 207 (361)
T TIGR01366 147 VRRP---EGSD------DALVVIDATSGAGGLPV-------DIA--ETDVYYFAPQKNFASDGGLWLAIMSPAA-LERIE 207 (361)
T ss_pred cccc---cccC------CCeEEEEcCccccCCCC-------CHH--HCCEEEEEchhhcCCCCceEEEEECHHH-Hhhhh
Confidence 9988 4778 99999999998765433 222 3899999999999999888887776532 11110
Q ss_pred cc--c----cCccCC-----CCCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 301 VF--H----INYLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 301 ~~--~----~~yl~~-----~~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
.. . +.|+.- ........++.+...++++..+++.+..+ |+..+.++..++++++.+.|.+++.++++.
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~ 287 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV 287 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 00 0 012110 00001122555556667888999988877 699999999999999999999998766664
Q ss_pred CCC--Ccc-EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 369 KDV--GVP-LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 369 ~~~--~~~-~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
... ..+ +.++.++ ++++..++.+.|.++|+.+..... ..+...+|++++..+|.+++++|++.|++++++
T Consensus 288 ~~~~~~s~~v~~v~~~--~g~~~~~v~~~L~~~gI~i~~~~~---~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 288 TDPGKRSQVVGTIDFV--DDIDAATVAKILRANGIVDTEPYR---KLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CChhhcccceEEEECC--CccCHHHHHHHHHHCCCeeccCcc---ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 321 222 2334443 357889999999999988743211 123457999999999999999999999998765
No 153
>PRK03321 putative aminotransferase; Provisional
Probab=99.89 E-value=1.7e-21 Score=196.77 Aligned_cols=310 Identities=13% Similarity=0.060 Sum_probs=211.7
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.+.... .|. .++..+ +++.+++++|.+++ .+++|+|+++++.+++.+...+
T Consensus 35 ~~~~~~~~a~~~~~~~~~-~y~-~~g~~~----lr~~ia~~~~~~~~-----~I~~~~G~~~~l~~~~~~~~~~------ 97 (352)
T PRK03321 35 GPLPSVRAAIARAAAGVN-RYP-DMGAVE----LRAALAEHLGVPPE-----HVAVGCGSVALCQQLVQATAGP------ 97 (352)
T ss_pred CCCHHHHHHHHHHHHhcC-cCC-CCcHHH----HHHHHHHHhCcCHH-----HEEECCCHHHHHHHHHHHhcCC------
Confidence 355678888877664322 222 234444 44557788886542 3888999999887776655322
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
++.|+++.+++..+..+++..|++++.++++++ +.+|++++++.+++++++|++++++||||.+.|.++|.+
T Consensus 98 -------gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~ 169 (352)
T PRK03321 98 -------GDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD-HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELAR 169 (352)
T ss_pred -------CCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC-CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHH
Confidence 468999999998888889999999999998754 679999999999889999999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecCcccccccccCCCCc--cc-c-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccc
Q 010897 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WD-F-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~-~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~ 301 (498)
+++++.. ++++++|++|+.+.. ..... .. + ..+++ .+..|..|.++ ++.++||++.. ++.. +.+.
T Consensus 170 l~~~~~~----~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~v~~-~~~~-~~~~ 239 (352)
T PRK03321 170 FLDAVPA----DVLVVLDEAYVEYVR---DDDVPDGLELVRDHPNV-VVLRTFSKAYGLAGLRVGYAVGH-PEVI-AALR 239 (352)
T ss_pred HHHhCCC----CeEEEEechHHHhcc---CcCCCcHHHHHhhCCCE-EEEecchHHhhhHHHhhhhhcCC-HHHH-HHHH
Confidence 9987411 899999999998752 11110 01 1 11223 34446778764 66779998853 2221 2211
Q ss_pred cccCccCCCCCCccccCCCchHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEe
Q 010897 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSL 380 (498)
Q Consensus 302 ~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (498)
.. ... .+ ...+.|.+++..+ ..+.+.+..++..+.++++.+.|++.+ +.+.. + +.+++.+++
T Consensus 240 ~~-------~~~----~~---~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~-~-~g~~i~i~l 302 (352)
T PRK03321 240 KV-------AVP----FS---VNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG-WTVPP-S-QANFVWLPL 302 (352)
T ss_pred Hh-------cCC----CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC-C-CCCEEEEeC
Confidence 10 001 11 2233444444444 334456666777777788999998875 66432 2 456776666
Q ss_pred cCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 381 KDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 381 ~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
. .+..++++.|.++|+.+..+ +...+|++++ +.+++++|+++|+++++
T Consensus 303 ~----~~~~~~~~~l~~~gI~v~~~-------~~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 303 G----ERTADFAAAAAEAGVVVRPF-------AGEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred C----CCHHHHHHHHHHCCEEEEcc-------CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 3 24678999999999887542 1234999987 78999999999988753
No 154
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2e-20 Score=192.16 Aligned_cols=338 Identities=15% Similarity=0.071 Sum_probs=217.4
Q ss_pred ccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH
Q 010897 60 LASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (498)
Q Consensus 60 ~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~ 138 (498)
+....+. ++++.+.+++.+.... ...|....+..++++.+.+++.. .|.+.+. ..+++|+|+++++.+++.++.
T Consensus 35 l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~---~~i~~t~G~~~al~~~~~~l~ 109 (397)
T PRK07568 35 LNIGQPDIKTPEVFFEAIKNYDEE-VLAYSHSQGIPELREAFAKYYKK-WGIDVEP---DEILITNGGSEAILFAMMAIC 109 (397)
T ss_pred ecCCCCCCCCCHHHHHHHHHHhcC-CcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc---ceEEEcCChHHHHHHHHHHhc
Confidence 3333343 3456777777765542 33344455677777777766653 4443322 238899999999988877653
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCcccc-CHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVM-NPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~-d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
++ +++|+++++.|..+...++..|++++.++++ ++++.+ |+++|++++++++++|++++|+||||
T Consensus 110 ~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG 176 (397)
T PRK07568 110 DP-------------GDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTG 176 (397)
T ss_pred CC-------------CCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCC
Confidence 32 4689999999988888889999999999986 333443 68999999988899999999999999
Q ss_pred cccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-CCCCeeEEEEcCCccCC-CCCCeEEEE
Q 010897 217 EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGVGWVV 289 (498)
Q Consensus 217 ~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~ 289 (498)
.+.+ +++|.++|+++ ++++++|++|+++.. ...... ..+ ....-..+..|.+|.++ ++.++||++
T Consensus 177 ~~~~~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~ 248 (397)
T PRK07568 177 VVYTKEELEMLAEIAKKH------DLFLISDEVYREFVY--DGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI 248 (397)
T ss_pred ccCCHHHHHHHHHHHHHC------CcEEEEeccchhccc--CCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe
Confidence 9864 78899999999 999999999998742 111111 111 11112245567788765 688999998
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (498)
..+++.+ +.+.. ... ..+ + ...+.|.++...+ +.+.+++..+...+.++.+.+.|++++++.+.
T Consensus 249 ~~~~~~~-~~~~~---~~~---~~~----~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 249 SKNKELI-AAAMK---LCQ---ARL----S---PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred cCCHHHH-HHHHH---Hhh---ccC----C---CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 6543322 11100 000 000 1 1122333333333 34445667777888999999999988766655
Q ss_pred eCCCCccEEEEEecCCCCCCHHHHHHHHHh------cCcEeeeec-CCC-CCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLRK------FGWIVPAYT-MPA-NAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~------~G~~v~~~~-~~~-~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
.+. +..++.++++. .+..++++.|.+ +|+.+.... +.. ...+.+++|+++.. +.+++++.++.|++
T Consensus 315 ~p~-g~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~--~~~~~~~~~~~l~~ 388 (397)
T PRK07568 315 KPK-GAFYIIAKLPV---DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL--NEEDLKRAMEILKE 388 (397)
T ss_pred CCC-cceEEEEecCC---CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC--CHHHHHHHHHHHHH
Confidence 332 33345557743 256788888865 587765322 111 11234689999863 56788877777777
Q ss_pred HHHH
Q 010897 440 VLKE 443 (498)
Q Consensus 440 ~l~~ 443 (498)
+++.
T Consensus 389 ~l~~ 392 (397)
T PRK07568 389 ALEK 392 (397)
T ss_pred HHHH
Confidence 6654
No 155
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=1.1e-20 Score=197.70 Aligned_cols=306 Identities=16% Similarity=0.099 Sum_probs=197.8
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH
Q 010897 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (498)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~ 171 (498)
+......++.+.+|+++|.+. .++.++|..+++.++.++..+ ++.|+++++.|.++...+
T Consensus 143 g~~~~~~ele~~lA~~~g~~~-------ai~~~~G~~an~~~i~al~~~-------------Gd~Vi~d~~~h~s~~~~~ 202 (489)
T PLN02483 143 GTTKLHRELEELVARFVGKPA-------AIVFGMGYATNSTIIPALIGK-------------GGLIISDSLNHNSIVNGA 202 (489)
T ss_pred CCcHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC-------------CCEEEEcchhhHHHHHHH
Confidence 345556677777999999754 444455677776666555332 579999999999999999
Q ss_pred HHcCCeeEEEEecCCccccCHHHHHHHhh-------hCC-----eEEEEeecc-CCcccccCHHHHHHHHHHhhcccCCC
Q 010897 172 RYFEVELKEVKLEEGYYVMNPVKAVELVD-------ENT-----ICVAAILGS-TLTGEFEDVKLLHDLLTKKNEETGWD 238 (498)
Q Consensus 172 ~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-------~~t-----~~v~~~~~~-t~tG~~~~l~~I~~la~~~~~~~~~~ 238 (498)
+..|++++.++.+ |+++|++.+. ++| ++++++.+. +++|.+.++++|.++|+++ +
T Consensus 203 ~~~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~------~ 270 (489)
T PLN02483 203 RGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY------K 270 (489)
T ss_pred HHcCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHc------C
Confidence 9999999999853 3444544443 222 445555444 7789999999999999999 9
Q ss_pred ceEEEecCcccccccccCCCCc--cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccc
Q 010897 239 TPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL 316 (498)
Q Consensus 239 ~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l 316 (498)
+++++|+||+.+..+....... .......+|++..+.+|.+++ .| ||++. +++.+ +.+.. .......
T Consensus 271 ~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~G-G~i~~-~~~li-~~l~~-------~~~~~~~ 339 (489)
T PLN02483 271 AYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CG-GYIAG-SKELI-QYLKR-------TCPAHLY 339 (489)
T ss_pred CEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-Cc-eEEEc-CHHHH-HHHHH-------hCccccc
Confidence 9999999997543211000000 111123578899999998754 44 77763 33222 21111 0000011
Q ss_pred cCCCchHHHHHHHHHHHHhc-H---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHH
Q 010897 317 NFSKGSSQIIAQYYQFIRLG-F---EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEIS 392 (498)
Q Consensus 317 ~~sr~~~~~~a~~~~l~~lg-~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~ 392 (498)
.++.+...+.+..++|+.+. . +...++.++..+++++|.+.|++++ +++..+. +.+++.+.+... .+..+++
T Consensus 340 ~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G-~~v~~~~-~sp~~~l~l~~~--~~~~~~~ 415 (489)
T PLN02483 340 ATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG-FEVLGDN-DSPVMPIMLYNP--AKIPAFS 415 (489)
T ss_pred cCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-CCCEEEEEECCH--HHHHHHH
Confidence 11222223333334454432 1 2235667888899999999999985 7776443 445666655321 2456899
Q ss_pred HHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 393 EGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 393 ~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++|.++|+.+....+|........+|++++..++.++++++++.|+++++.+
T Consensus 416 ~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 416 RECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999988654444333444679999988889999999999999887654
No 156
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.8e-21 Score=193.07 Aligned_cols=291 Identities=15% Similarity=0.083 Sum_probs=201.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++++.+++++|++.+ .+++|+|+++++.+++.++..+ +++.|++++++|..+...++..|+++
T Consensus 63 ~lr~~ia~~~~~~~~-----~I~~t~G~~~~l~~~~~~~~~~------------g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 63 GLRSALAALYGCAPE-----QLLIGRGSDEAIDLLVRALCVP------------GRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred HHHHHHHHHhCcChH-----HEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 556668888888653 3999999999998888776432 12579999999999999999999999
Q ss_pred EEEEec--CCccccCHHHHHHH-hhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 179 KEVKLE--EGYYVMNPVKAVEL-VDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 179 ~~v~~~--~~~~~~d~~~L~~~-i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
+.+|++ ++++.+|++++.+. +.+++++|++++|+||||.+.+.+++.++++...+ +++|++|++|+.|..
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~----~~~iI~Deay~~f~~--- 198 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG----KALVVVDEAYGEFSD--- 198 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC----CcEEEEeCcchhhcC---
Confidence 999984 23467899987654 46789999999999999999999999999886422 789999999998752
Q ss_pred CCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
.+...... ..+++. +.-+..|.+ +++.++||++.. ++.+ ..+. .....+. ...++|.++..
T Consensus 199 ~~~~~~~~~~~~~vi-~~~SfSK~~gl~GlRvGy~v~~-~~l~-~~l~-------~~~~~~~-------~~~~~~~~a~~ 261 (364)
T PRK04781 199 VPSAVGLLARYDNLA-VLRTLSKAHALAAARIGSLIAN-AELI-AVLR-------RCQAPYP-------VPTPCAALAEQ 261 (364)
T ss_pred CcchHHHHhhCCCEE-EEecChhhcccccceeeeeeCC-HHHH-HHHH-------hccCCCC-------CCHHHHHHHHH
Confidence 11110011 224444 456777755 589999998843 2222 1111 0011111 11223344444
Q ss_pred HhcH---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC
Q 010897 334 RLGF---EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN 410 (498)
Q Consensus 334 ~lg~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~ 410 (498)
.+.. +.+.+.++...+.++++.+.|++++++..+.++ ..+++.++++ +..++.+.|.++|+.++......
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~-~g~f~~~~~~-----~~~~~~~~l~~~gI~v~~~~~~~- 334 (364)
T PRK04781 262 ALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS-QGNFLLVRFD-----DAEAAFQALLAAGVVVRDQRAAP- 334 (364)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHHHCCeEEeeCCCCC-
Confidence 4422 334556667778889999999998766423333 5778777773 35688999999999886543211
Q ss_pred CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 411 AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 411 ~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
....++||+++ +.+++++|+++|+++.
T Consensus 335 -~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 335 -RLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred -CCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 22467999998 7889999999988754
No 157
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=1.6e-20 Score=185.50 Aligned_cols=329 Identities=15% Similarity=0.104 Sum_probs=234.0
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
..+..+.+.+.+..+++.. .+...++|++ +++++|.+. .+.+++||.|+.++++++.-.
T Consensus 14 ~~~e~~~v~~vl~sg~i~~--G~~v~~FE~~----~ae~~G~k~-------ava~~sgT~AL~laL~al~ig-------- 72 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTG--GPFVRRFEQA----FAEYLGVKY-------AVAVSSGTAALHLALLALAIG-------- 72 (374)
T ss_pred chHHHHHHHHHHHcCCeec--ChHHHHHHHH----HHHHhCCCe-------EEEecChHHHHHHHHHhcCCC--------
Confidence 3567788889999988755 6677777765 899999986 999999999999999976311
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la 228 (498)
.+++||+|+.++.+...+.-+.|++++.|+++++++.||++.|+++|+++|++|+.. ...|...|+++|.+||
T Consensus 73 ----~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipV---hl~G~~~dm~~i~~la 145 (374)
T COG0399 73 ----PGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPV---HLAGQPCDMDAIMALA 145 (374)
T ss_pred ----CCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEe---hhccCCCCHHHHHHHH
Confidence 257999999999999999999999999999998889999999999999999998644 5578899999999999
Q ss_pred HHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccC
Q 010897 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLG 308 (498)
Q Consensus 229 ~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~ 308 (498)
++| |++|+.|+|++.+.. +...... ....+-++++.+.|.+.+. ..|++++++++.......+...=..
T Consensus 146 ~~~------~l~vIEDaAqa~Ga~--y~gk~vG--t~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~ 214 (374)
T COG0399 146 KRH------GLPVIEDAAQAHGAT--YKGKKVG--SFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLS 214 (374)
T ss_pred HHc------CCeEEEEcchhccCe--ecCcccc--cccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcC
Confidence 999 999999999987752 2221111 2345788899999999877 5688888876543221111100000
Q ss_pred ------CCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC----ccEEEE
Q 010897 309 ------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG----VPLVAF 378 (498)
Q Consensus 309 ------~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~----~~~v~f 378 (498)
.....+++ + ..+-...+++....-+.+.+..++..++++++.+.|++++++.+...+.. ..+...
T Consensus 215 ~~~~~~y~~~~~G~---N--~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 215 RDAVFKYLHEELGY---N--YRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred CCccccceeeeccc---c--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEE
Confidence 00111222 1 12222333343333456678888889999999999999876655444322 223333
Q ss_pred EecCCCCCCHHHHHHHHHhcCcEeeeecCCCC--------------------CCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 379 SLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN--------------------AENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~--------------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
.+++. +.+...+.+.|+++|+....+..|.. ......+++=+.+..+.++++++++.|+
T Consensus 290 ~~~~~-~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 290 LVDEE-GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK 368 (374)
T ss_pred EecCC-CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 44332 46778999999999776333332211 0113567777778889999999999998
Q ss_pred HHHH
Q 010897 439 EVLK 442 (498)
Q Consensus 439 ~~l~ 442 (498)
+++.
T Consensus 369 ~~~~ 372 (374)
T COG0399 369 EVLG 372 (374)
T ss_pred HHhc
Confidence 8875
No 158
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=1.8e-20 Score=194.03 Aligned_cols=335 Identities=16% Similarity=0.184 Sum_probs=211.6
Q ss_pred HHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (498)
Q Consensus 71 ~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~ 150 (498)
.+.+.+.+++..+...|...++..+++++ +++++|.+. +++|+|+++|+.+++.++.++
T Consensus 58 a~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~-------vv~t~ggt~A~~~~~~all~p---------- 116 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY-------TIPTHQGRAAEQILFPVLIKK---------- 116 (460)
T ss_pred hhhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc-------EEECCCHHHHHHHHHHHhCCC----------
Confidence 45666666665544456667777777776 677777653 899999999999988776443
Q ss_pred CCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-------Cccc--cCHHHHHHHhhh----CCeEEEEeeccCCcc-
Q 010897 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-------GYYV--MNPVKAVELVDE----NTICVAAILGSTLTG- 216 (498)
Q Consensus 151 ~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-------~~~~--~d~~~L~~~i~~----~t~~v~~~~~~t~tG- 216 (498)
++ |+++.+.+.++...++..|++++.+++++ +.|. +|+++|++.|++ +|++|+++.++|++|
T Consensus 117 ---GD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG 192 (460)
T PRK13238 117 ---GD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGG 192 (460)
T ss_pred ---CC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCC
Confidence 45 88888888888888899999999999863 2344 999999999984 689999999999998
Q ss_pred cc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC---CC-cccc------CCCCeeEEEEcCCccCCCCC
Q 010897 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---DL-EWDF------RLPLVKSINVSGHKYGLVYA 283 (498)
Q Consensus 217 ~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~---~~-~~~~------~~~~~dsi~~s~hK~l~~p~ 283 (498)
.+ +++++|.++|+++ |++|++|+|+....+-|... .. .... -....|++++|+||.+++|.
T Consensus 193 ~v~s~~~l~~I~~ia~~~------gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~ 266 (460)
T PRK13238 193 QPVSMANLRAVYEIAKKY------GIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNI 266 (460)
T ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcc
Confidence 44 5578999999999 99999999873210101110 00 0010 01358999999999999988
Q ss_pred CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 284 g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
| |+++.++++...........+-+ ..++ +........++..++...-.+ ...+...+.+++|.+.|.+.|
T Consensus 267 G-G~i~~~d~~l~~~~~~~~~~~~g--~~t~---~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G- 336 (460)
T PRK13238 267 G-GLLCFRDEDLFTECRTLCILYEG--FPTY---GGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAG- 336 (460)
T ss_pred e-eEEEcChHHHHHHhhhcccccCC--cccc---cCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCC-
Confidence 6 78777754332111001000011 1111 222122233333344322122 223333446799999999875
Q ss_pred eEEeeCCCCccEEEEEecC------CCCCCHHHHHHHHH-hcCcEeee---ecCCCCC-------CCeeEEEEeecC-CC
Q 010897 364 FEILSKDVGVPLVAFSLKD------SSAHTVFEISEGLR-KFGWIVPA---YTMPANA-------ENVAVLRVVVRE-DF 425 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~------~~~~~~~~l~~~L~-~~G~~v~~---~~~~~~~-------~~~~~lRv~v~~-~~ 425 (498)
+.++.+. +...+..++.. ..++...+++..|. +.|+.+.. +..+.+. .....+|+++.- -.
T Consensus 337 ~~~~~p~-Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~ 415 (460)
T PRK13238 337 VPIQTPA-GGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVY 415 (460)
T ss_pred CCeEccC-CceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccC
Confidence 8887654 44555555532 11234567887766 45665421 1122211 124789999842 45
Q ss_pred CHHHHHHHHHHHHHHHHHHHcC
Q 010897 426 SRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 426 t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
|.+.++.+.+.|+.+.+.-+..
T Consensus 416 ~~~~~~~~~~~l~~~~~~~~~~ 437 (460)
T PRK13238 416 TQSHMDYVAEALKAVKENRESI 437 (460)
T ss_pred CHHHHHHHHHHHHHHHHhHhhc
Confidence 7888887777777776554443
No 159
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=7.2e-21 Score=190.55 Aligned_cols=282 Identities=13% Similarity=0.068 Sum_probs=190.7
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++++.+++.+|.+.. .+++|+|+++++.+++..+ .+ ..|++.+++|..+...++..|+++
T Consensus 44 ~lr~~ia~~~~~~~~-----~I~it~Gs~~~l~~~~~~~-~~--------------~~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 44 DIEDQIKIYTQGLKI-----KVLIGPGLTHFIYRLLSYI-NV--------------GNIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred HHHHHHHHHhCCCcc-----eEEECCCHHHHHHHHHHHh-CC--------------CcEEEeCCChHHHHHHHHHcCCeE
Confidence 566669999999763 3999999999998877532 21 257777999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
+.||+++ +.+|++.+++ .++++|++++|+||||.+.+ +++|.++|+++ +++|++|++|+.+...-
T Consensus 104 ~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~DE~Y~~~~~~~- 171 (332)
T PRK06425 104 SALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK------GALLFIDEAFIDFVPNR- 171 (332)
T ss_pred EEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc------CCEEEEecchhcccccc-
Confidence 9999975 3467666653 37889999999999999876 45666777888 99999999999875210
Q ss_pred CCCC-ccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDL-EWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~-~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
.+.. ...-..+++. +.-|..|.+ +++.++||++... +.. +.+.. ....+.+ +.+++ .++.
T Consensus 172 ~~~~~~~~~~~~~vi-~~~SfSK~~~l~GlRiGy~v~~~-~li-~~l~~-------~~~~~~~-------~~~~~-~~l~ 233 (332)
T PRK06425 172 AEEDVLLNRSYGNVI-IGRSLTKILGIPSLRIGYIATDD-YNM-KISRK-------ITEPWSV-------CDPAI-DFIR 233 (332)
T ss_pred chhHHHHhccCCCEE-EEeecHHhcCCchhhheeeecCH-HHH-HHHHH-------cCCCCcc-------CHHHH-HHHH
Confidence 0111 1001123443 444566654 4899999998532 221 21110 0111111 11111 1122
Q ss_pred HhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCC
Q 010897 334 RLGFEGY-KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAE 412 (498)
Q Consensus 334 ~lg~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~ 412 (498)
....+.+ ++..+...+.++++.+.|++++ +++..++ ..+++.++++ +..++.++|.++|+.+....... ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~-~g~f~~~~~~-----~~~~~~~~l~~~gi~v~~~~~f~-~~ 305 (332)
T PRK06425 234 SIDLDYVAKHSLDIMENERSYLINNLEAMG-FRAAGDP-SANFITFMIP-----DAHDFYSYLLKNGILVRLLDDYE-CL 305 (332)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-CceEEEEEcC-----CHHHHHHHHHHCCeEEEECCCCC-CC
Confidence 2222333 4566777788899999999985 7776444 5778888774 45789999999998876433211 12
Q ss_pred CeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 413 NVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 413 ~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+.+++|++++ +.+++++|+++|++++
T Consensus 306 ~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 306 GEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 3468999998 7899999999998765
No 160
>PLN02231 alanine transaminase
Probab=99.88 E-value=5.2e-20 Score=193.87 Aligned_cols=349 Identities=13% Similarity=0.083 Sum_probs=220.8
Q ss_pred CCCC-CcccccccCCChHHHHHHHHHHhcc----CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 54 GNPR-LNLASFVTTWMEPECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 54 ~~p~-~~~~~~~~~~~~~~~~~~l~~~~~~----n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
..|. +++....+.++...+..+. +.+.. ....|....+..++++.+.+++.+..|++.+. ..+++|+|+++
T Consensus 127 ~~p~~i~~~~~~~~fp~~~i~~a~-~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p---e~I~iT~Ga~~ 202 (534)
T PLN02231 127 DHPSLLDKSETHGLFSADAIERAW-QILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADP---NDIFLTDGASP 202 (534)
T ss_pred cCCccCCCCCccccCCHHHHHHHH-HHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCc---ccEEEeCCHHH
Confidence 3344 3444333444444444433 34433 23446677788999999999998887876543 24999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhh------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------ 201 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~------ 201 (498)
|+.+++.++... .++.|+++.++|..+...++..|+.++.+++++ ++|.+|+++|++++++
T Consensus 203 ai~~~~~~l~~~------------~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~ 270 (534)
T PLN02231 203 AVHMMMQLLIRS------------EKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGI 270 (534)
T ss_pred HHHHHHHHhccC------------CCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCC
Confidence 999988887531 146899999999999999999999999999974 3589999999999875
Q ss_pred CCeEEEEeeccCCccccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-------CC--CCee
Q 010897 202 NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-------RL--PLVK 269 (498)
Q Consensus 202 ~t~~v~~~~~~t~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-------~~--~~~d 269 (498)
++++|++++|+||||.+. .+++|.++|+++ +++|++|++|..++. ........+ +. ....
T Consensus 271 ~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~------~l~lI~DEvY~~l~y--~~~~~~~s~~~~~~~~g~~~~~~~ 342 (534)
T PLN02231 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQE------GLVLLADEVYQENVY--VPDKKFHSFKKVARSMGYGEKDIS 342 (534)
T ss_pred CeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhccc--CCCCCcccHHHHHhhhccccCCce
Confidence 688899999999999995 567788899999 999999999998752 111100011 11 1122
Q ss_pred EE-EEcCCcc--CCCCCCeEEEEEeC-CCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh-----cHHHH
Q 010897 270 SI-NVSGHKY--GLVYAGVGWVVWRT-KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-----GFEGY 340 (498)
Q Consensus 270 si-~~s~hK~--l~~p~g~g~~~~~~-~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l-----g~~g~ 340 (498)
.+ .-|..|. +.++.++||+++.. +..+...+.. +. ...+ ++ ..+.|.++...+ |+..|
T Consensus 343 vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k----~~----~~~~-~s----~~~~Q~~~~~~l~~p~~~~~~y 409 (534)
T PLN02231 343 LVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYK----VA----SVNL-CS----NISGQILASLVMSPPKPGDESY 409 (534)
T ss_pred EEEEeccCcccccCCccceEEEEEecCCHHHHHHHHH----HH----hhhc-CC----ChHHHHHHHHHhCCCCCCcchH
Confidence 33 3477884 45789999998642 1112111110 00 0011 11 123344333333 12233
Q ss_pred H-------HHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE-EecCC-CC---------CCHHHHHHHHH-hcCcE
Q 010897 341 K-------NIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF-SLKDS-SA---------HTVFEISEGLR-KFGWI 401 (498)
Q Consensus 341 ~-------~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~-~~---------~~~~~l~~~L~-~~G~~ 401 (498)
. ++.+.+.++++.+.+.|++++++.+..+ ..++++| ++.-+ .. .+...++.+|. +.|+.
T Consensus 410 ~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p--~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~ 487 (534)
T PLN02231 410 ESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKA--EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIV 487 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC--CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEE
Confidence 2 2345677788899999999877877543 4666666 43211 00 12234566665 56987
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+.....-....+..++|+++. .+.++++..++.|.++++.
T Consensus 488 vvPGs~Fg~~~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 488 VVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred EeCCcccCCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 643321111134557999985 3667776666666666554
No 161
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=1.6e-20 Score=191.72 Aligned_cols=328 Identities=14% Similarity=0.117 Sum_probs=213.6
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g 149 (498)
++..+++.+++..+... ..+...++| +.+++++|.+. .+.+++|++|+.+++.++.-+
T Consensus 10 ~~~~~~v~~~~~~~~~~--~g~~~~~le----~~la~~~g~~~-------~v~~~sgt~al~~~l~al~~~--------- 67 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT--QGPTVPAFE----EALAEYVGAKY-------AVAFNSATSALHIACLALGVG--------- 67 (380)
T ss_pred HHHHHHHHHHHhcCCcc--CChhHHHHH----HHHHHHHCCCe-------EEEEcCHHHHHHHHHHHcCCC---------
Confidence 34456667777665432 234444444 45888888864 667778999998888776211
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCcccccCHHHHH
Q 010897 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 150 ~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
.+++|++++++|.++..++...|++++.++++++++.+|+++++++++ ++|++|+++ +++|...|+++|.
T Consensus 68 ---~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~ 141 (380)
T TIGR03588 68 ---PGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIA 141 (380)
T ss_pred ---CCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHH
Confidence 146899999999999999999999999999976668899999999998 678887654 4689999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCC--ccCCCCCCeEEEEEeCCCCCCcccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~h--K~l~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
++|+++ +++|++|++++.+.. +...... .....|..++|+| |++..+. .|++++++++.........
T Consensus 142 ~l~~~~------~~~lI~D~a~a~g~~-~~~~~~g---~~~~~d~~~~S~~~~K~~~~~~-GG~v~~~~~~~~~~~~~~~ 210 (380)
T TIGR03588 142 ALAKKH------GLKIIEDASHALGAE-YGGKPVG---NCRYADATVFSFHPVKIITTAE-GGAVTTNDEELAERMRLLR 210 (380)
T ss_pred HHHHHc------CCEEEEECCCcccCc-cCCEeCC---CccccceEEEecCCCCcccccC-ceEEEECCHHHHHHHHHHH
Confidence 999999 999999999987542 2111110 0113488888887 8887654 4666666543321110000
Q ss_pred -cCccCCC--------------CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 304 -INYLGSD--------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 304 -~~yl~~~--------------~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
....... ....++++ + ..-+....++.. .+.+.++.++.+++++++.+.|..++++.++.
T Consensus 211 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~-~--m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~ 285 (380)
T TIGR03588 211 SHGITKDPLLFEKQDEGPWYYEQQELGFNY-R--MTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLT 285 (380)
T ss_pred HCCCCCCcccccccccCcceeeeecccccc-C--ccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCC
Confidence 0000000 00011111 1 111111222222 23467888899999999999999998766543
Q ss_pred CCC--C--ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCC---------C---------CeeEEEEeecCCCC
Q 010897 369 KDV--G--VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANA---------E---------NVAVLRVVVREDFS 426 (498)
Q Consensus 369 ~~~--~--~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~---------~---------~~~~lRv~v~~~~t 426 (498)
++. . ..+..+.+....+.+..++.+.|.++|+.++.+..|... . ....+++.++...|
T Consensus 286 ~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 286 IPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred CCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 321 1 123334443223457889999999999877544322110 0 12678888888889
Q ss_pred HHHHHHHHHHHHHHH
Q 010897 427 RSLVERLISHIEEVL 441 (498)
Q Consensus 427 ~~~~~~l~~~l~~~l 441 (498)
.++++++++.|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999888888763
No 162
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.88 E-value=6.2e-20 Score=188.75 Aligned_cols=346 Identities=14% Similarity=0.017 Sum_probs=218.1
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcc-CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
+++....|.. +++.+.+.+.+.+.. ....|....+...+++.+.+++.+.+|++.+.+ ..+++|+|+++++.+++.
T Consensus 36 ~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~--~~I~it~G~~~al~~~~~ 113 (403)
T PRK08636 36 IDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPE--TEVVATMGSKEGYVHLVQ 113 (403)
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEECCChHHHHHHHHH
Confidence 3444433332 234444555544433 244555566888999999999998888764321 138999999999998888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHH----HHHhh---hCCeEEE
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKA----VELVD---ENTICVA 207 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L----~~~i~---~~t~~v~ 207 (498)
++.++ ++.|++++++|..+...++..|++++.||++ ++++.+|++.+ ++++. .++++|+
T Consensus 114 ~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~ 180 (403)
T PRK08636 114 AITNP-------------GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVV 180 (403)
T ss_pred HhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEE
Confidence 87543 5799999999999999999999999999985 33478998754 55554 3688999
Q ss_pred EeeccCCcccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--cc-CCCCeeEEEEcCCccC-C
Q 010897 208 AILGSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DF-RLPLVKSINVSGHKYG-L 280 (498)
Q Consensus 208 ~~~~~t~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~-~~~~~dsi~~s~hK~l-~ 280 (498)
+++|+||||.+.+. ++|.++|+++ +++|++|++|+.+.. ....... .+ ......+...|..|.+ .
T Consensus 181 ~~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 252 (403)
T PRK08636 181 VNFPHNPTTATVEKSFYERLVALAKKE------RFYIISDIAYADITF--DGYKTPSILEVEGAKDVAVESYTLSKSYNM 252 (403)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccchhhcc--CCCCCCChhcCCCccccEEEEEecccccCC
Confidence 99999999999654 6788889999 999999999998752 1111110 11 1112334456788987 7
Q ss_pred CCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 281 ~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
++.++||++. +++.+ ..+.....+... +.....+.++. .++. -..+..++..+...++++.+.+.|++
T Consensus 253 ~GlRiG~iv~-~~~li-~~~~~~~~~~~~--------~~~~~~q~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (403)
T PRK08636 253 AGWRVGFVVG-NKKLV-GALKKIKSWLDY--------GMFTPIQVAAT-IALD-GDQSCVEEIRETYRKRRDVLIESFAN 320 (403)
T ss_pred ccceeeeeeC-CHHHH-HHHHHHHHHhcc--------cCChHHHHHHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999874 32221 111111111000 11111222221 1221 12334556666677788889999998
Q ss_pred CCCeEEeeCCCCccEEEEEecCC-CCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDS-SAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
.+ +.+..+. +..++.+++++. ...+..+++.+|. +.|+.+.....- ...+.+++|+++. ...+++++.++.|+
T Consensus 321 ~~-~~~~~p~-~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f-~~~~~~~iRi~~~--~~~~~l~~~~~rl~ 395 (403)
T PRK08636 321 AG-WELQKPR-ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF-GEYGDEYVRIALI--ENENRIRQAARNIK 395 (403)
T ss_pred CC-CcccCCC-cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh-CcCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 75 6654332 556777787532 1235678887754 678876433211 1223468999996 35566665555555
Q ss_pred HHHHH
Q 010897 439 EVLKE 443 (498)
Q Consensus 439 ~~l~~ 443 (498)
++++.
T Consensus 396 ~~l~~ 400 (403)
T PRK08636 396 KFLKE 400 (403)
T ss_pred HHHHh
Confidence 55543
No 163
>PLN02822 serine palmitoyltransferase
Probab=99.88 E-value=1.6e-20 Score=195.95 Aligned_cols=350 Identities=15% Similarity=0.078 Sum_probs=228.2
Q ss_pred ccCCCCCccccccc--CCChHHHHHHHHHHhccCCCCCcC---CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecCh
Q 010897 52 LDGNPRLNLASFVT--TWMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (498)
Q Consensus 52 ~~~~p~~~~~~~~~--~~~~~~~~~~l~~~~~~n~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (498)
.+|+..+|+.++.. ...+|.+.+++.+++++....+.. .-+......++.+.|++++|.+. ..++++|+
T Consensus 106 ~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~------~i~~s~G~ 179 (481)
T PLN02822 106 INGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD------SILYSYGL 179 (481)
T ss_pred ECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC------EEEECCHH
Confidence 35666667665422 234688999999988874433222 22455666677788999998753 26667666
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhh--hCC
Q 010897 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENT 203 (498)
Q Consensus 127 sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~--~~t 203 (498)
+ ++..++.++.++ ++.|++....|.++..++++.|.+++.++.++ +++..+++++++... +++
T Consensus 180 ~-a~~sai~a~~~~-------------gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~ 245 (481)
T PLN02822 180 S-TIFSVIPAFCKK-------------GDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKL 245 (481)
T ss_pred H-HHHHHHHHhCCC-------------CCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCC
Confidence 5 666666655332 46899999999999999999999999888653 122233333332221 234
Q ss_pred -eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc---cccCC--CCeeEEEEcCCc
Q 010897 204 -ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRL--PLVKSINVSGHK 277 (498)
Q Consensus 204 -~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~---~~~~~--~~~dsi~~s~hK 277 (498)
++|++..+.+++|.+.|+++|.++|++| ++++++|++|+.++. ....+ ..+++ ..+|.++.+..|
T Consensus 246 ~~~Ivve~i~~~~G~i~~L~~i~~l~~k~------~~~LIvDEa~s~gvl---G~~G~G~~e~~~v~~~~~dii~~s~sK 316 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAPLDEIVRLKEKY------RFRVLLDESNSFGVL---GKSGRGLSEHFGVPIEKIDIITAAMGH 316 (481)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEECCcccccc---CCCCCChHHHcCCCCCCCeEEEecchh
Confidence 6888888888899999999999999999 999999999985542 11111 11222 357888889899
Q ss_pred cCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010897 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREG 357 (498)
Q Consensus 278 ~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 357 (498)
.+. ..| |+++.+ ++.+ +. +......+++.++.+.....+..++|..+. ...+..+++.+++++|.+.
T Consensus 317 alg-~~G-G~i~g~-~~ii-~~-------~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 317 ALA-TEG-GFCTGS-ARVV-DH-------QRLSSSGYVFSASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKG 383 (481)
T ss_pred hhh-hCC-eEEEcC-HHHH-HH-------HHhcCCceeeccccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHH
Confidence 874 334 666633 2222 11 111112223223333333344444554432 2357788999999999999
Q ss_pred HhcCCCeEEeeCCCCccEEEEEecCCCCC---C---HHHHHHHHH-hcCcEeeeecCCCCC--CCeeEEEEeecCCCCHH
Q 010897 358 LEKTGRFEILSKDVGVPLVAFSLKDSSAH---T---VFEISEGLR-KFGWIVPAYTMPANA--ENVAVLRVVVREDFSRS 428 (498)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~---~~~l~~~L~-~~G~~v~~~~~~~~~--~~~~~lRv~v~~~~t~~ 428 (498)
|++.+++.+..++ ..+++.+.+++..+. + ..+++++|. ++|+.+.....|... .....+|++++..+|.+
T Consensus 384 L~~~~g~~~~~~~-~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~e 462 (481)
T PLN02822 384 LSDIPGLSIGSNT-LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTES 462 (481)
T ss_pred HHhcCCcccCCCC-CCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHH
Confidence 9998668776543 678888888532111 1 357899987 889988644333211 12346999999888999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010897 429 LVERLISHIEEVLKEI 444 (498)
Q Consensus 429 ~~~~l~~~l~~~l~~l 444 (498)
+++++++.|++++..+
T Consensus 463 dI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 463 DILKASESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888654
No 164
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.7e-20 Score=187.90 Aligned_cols=299 Identities=15% Similarity=0.133 Sum_probs=200.4
Q ss_pred CChHHHHHHHHHHhccCCCC-CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+.+.+++...... |. .++..++++.+.+++.+. +.++ ..+++|+|+++++.+++.++
T Consensus 32 ~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~-~~~~-----~~i~it~Ga~~~i~~~~~~~-------- 96 (335)
T PRK14808 32 PFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTD-FLSK-----NNVSVGNGADEIIYVMMLMF-------- 96 (335)
T ss_pred CCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCC-CCCc-----ceEEEcCCHHHHHHHHHHHh--------
Confidence 55677888887776542221 22 234555555544444332 1443 23999999999999888765
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
+.|++.+++|..+..+++..|++++.+|++++ +.+|... + ..+++|++++|+||||...+.+++.
T Consensus 97 ---------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 97 ---------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred ---------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc-CCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 25899999999999999999999999999764 6565432 2 3478899999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCccccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
+++ ++ +++|++|++|..+.. .......-..+++. +..|..|.++ ++.++||++... +.+ +.+..
T Consensus 162 ~l~-~~------~~~ii~DE~Y~~f~~---~~~~~~~~~~~~vi-~~~S~SK~~~l~GlRvG~~v~~~-~~~-~~l~~-- 226 (335)
T PRK14808 162 RIL-KT------GAFVALDEAYYEFHG---ESYVDLLKKYENLA-VIRTFSKAFSLAAQRIGYVVSSE-KFI-DAYNR-- 226 (335)
T ss_pred HHH-hc------CCEEEEECchhhhcC---CchHHHHHhCCCEE-EEEechhhccCcccceEEEEeCH-HHH-HHHHH--
Confidence 998 57 899999999988631 00000000223444 4446667655 889999998643 221 21110
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (498)
....+. ...+.|.++...+. .+.+.+..+...+.++++.+.|++.+ +++..+ ..+++.+++++
T Consensus 227 -----~~~~~~-------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~--~g~f~~~~l~~- 290 (335)
T PRK14808 227 -----VRLPFN-------VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG-YRITDS--RGNFVFIFMEK- 290 (335)
T ss_pred -----hcCCCC-------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC--CCeEEEEeCCC-
Confidence 000111 11222333333332 23456667777778888999999885 876643 57788777753
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
.+..++.++|.++|+.++.+ + .++||+++ +.+++++|++.|+.
T Consensus 291 --~~~~~~~~~l~~~Gi~V~~~--~------~~~Risi~---~~~~~~~~~~~l~~ 333 (335)
T PRK14808 291 --EEKERLLEHLRAKNIAVRSF--R------EGVRITIG---KREENDMILKELEV 333 (335)
T ss_pred --ccHHHHHHHHHHCCeEEEEC--C------CCeEEecC---CHHHHHHHHHHHHh
Confidence 35578999999999988743 1 35999998 67899988888864
No 165
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.88 E-value=2.9e-20 Score=188.41 Aligned_cols=316 Identities=15% Similarity=0.103 Sum_probs=208.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
++++.+.+++.+.+.. ...|.. +... .+++.+++.++++.+ .+++|+|+++++.+++.++. +
T Consensus 35 ~~~~~~~~a~~~~~~~-~~~Y~~-~~~~----~Lr~aia~~~~v~~~-----~I~it~G~~~~i~~~~~~l~-~------ 96 (360)
T PRK07392 35 GPPESVIAAIQSALSA-LRHYPD-PDYR----ELRLALAQHHQLPPE-----WILPGNGAAELLTWAGRELA-Q------ 96 (360)
T ss_pred CCCHHHHHHHHHHHHH-hhcCCC-cCHH----HHHHHHHHHhCcChh-----hEEECCCHHHHHHHHHHHhC-C------
Confidence 5667777777776654 222322 2333 444557777777653 39999999999988776642 1
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCcc----ccCHHHHHHHhhhCCeEEEEeeccCCcccccCHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~----~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~ 222 (498)
++.|++++++|..+...++.+|++++.+|+++++. ..|++.+++.. .+++++++++|+||||.+.+.+
T Consensus 97 -------g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~ 168 (360)
T PRK07392 97 -------LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSRE 168 (360)
T ss_pred -------CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHH
Confidence 25799999999999999999999999999974322 35677776654 4678999999999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccc
Q 010897 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDEL 300 (498)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~ 300 (498)
+|.++++++ ++ +++|++|..+..+...+...... ..+++ ++..|..|.+ +++.++||++... +.+ +.+
T Consensus 169 ~l~~l~~~~------~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~v-i~i~S~SK~~~l~GlRiG~~v~~~-~~~-~~~ 238 (360)
T PRK07392 169 AILPLLEQF------AL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNL-IILRSLTKFYSLPGLRLGYAIAHP-DRL-QRW 238 (360)
T ss_pred HHHHHHHHC------CE-EEEECchhhhccCccccchHHHhhcCCCE-EEEEechhhhcCCchheeeeeCCH-HHH-HHH
Confidence 999999998 75 66799999875211000100011 12344 3445667766 4899999998643 221 111
Q ss_pred ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEE
Q 010897 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKN-IMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (498)
Q Consensus 301 ~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~-~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (498)
. .+. ..+ ....+.|+++...+....+.+ ..+...+.++++.+.|++++++.+.. ++.+++.++
T Consensus 239 ~---~~~----~~~-------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~fl~~~ 302 (360)
T PRK07392 239 Q---QWR----DPW-------PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAANFLLVQ 302 (360)
T ss_pred H---hhC----CCC-------CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCCEEEEE
Confidence 1 000 011 123455666666665444443 34556668888999999887787653 356777666
Q ss_pred ecCCCCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 380 LKDSSAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 380 ~~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
++. +..+++++| .+.|+.+...... ...+.+++|++++ +.++.++|.+.|+++++
T Consensus 303 ~~~----~~~~l~~~ll~~~gv~v~pg~~f-~~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 303 SQG----SALQLQEKLLQQHRILIRDCLSF-PELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred cCC----CHHHHHHHHHhhCCEEEEeCCCC-CCCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 532 566888885 5679887543321 1223568999997 55677888888877653
No 166
>PLN02672 methionine S-methyltransferase
Probab=99.88 E-value=8.1e-20 Score=201.12 Aligned_cols=341 Identities=12% Similarity=0.080 Sum_probs=225.4
Q ss_pred CCCCcccccccC-CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHH
Q 010897 55 NPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (498)
Q Consensus 55 ~p~~~~~~~~~~-~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la 133 (498)
.+.+++....+. ++++.+.+++.+++..... +.+..++.+.+++|+++.+|++.+.. ..+++|+|+++++.++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~~--e~IIvt~Gs~elL~ll 770 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDSC--TEFVYGDTSLALFNKL 770 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCCC--CEEEEeCCHHHHHHHH
Confidence 344455554444 3567788888877654322 12233467899999999999986421 2488889999988888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhh-CCeEEEEeec
Q 010897 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE-NTICVAAILG 211 (498)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~-~t~~v~~~~~ 211 (498)
+.++.++ ++.|+++.++|..+..+++..|++++.+|++ +++|.+|+++|++++++ ++..|++++|
T Consensus 771 l~aLl~p-------------GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nP 837 (1082)
T PLN02672 771 VLCCVQE-------------GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGP 837 (1082)
T ss_pred HHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECc
Confidence 8777553 4799999999999999999999999999997 34689999999999976 3467899999
Q ss_pred c-CCccccc---CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-cccc-----CC----C--CeeEEEEcC
Q 010897 212 S-TLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDF-----RL----P--LVKSINVSG 275 (498)
Q Consensus 212 ~-t~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~~~~-----~~----~--~~dsi~~s~ 275 (498)
+ ||||.+. .+++|.++|+++ |++|++|++|+++.. ..... .+.+ .. + ++..+..-+
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~------di~VIsDEaYsdL~F--d~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfS 909 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKY------GARVIIDTSFSGLEY--DTSGWGGWDLKSILSRLKSSNPSFAVALLGGLS 909 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CCEEEEeCCCCcccc--CCCCCcccchhhHHHHhccccCCceEEEEeCcH
Confidence 8 9999994 566778888999 999999999997652 11110 0111 11 1 244444556
Q ss_pred CccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc------HHHHHHHHHHHHH
Q 010897 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG------FEGYKNIMENCMG 349 (498)
Q Consensus 276 hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg------~~g~~~~~~~~~~ 349 (498)
+||++++.++||++..+++.. +.+.....+. .. .....+++.+++..+. .+.+++..+...+
T Consensus 910 Kkf~lpGLRIGylIap~~eLi-~~l~~~~~~s----------~~-~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~ 977 (1082)
T PLN02672 910 TELLSGGHEFGFLALNDSVLI-DAFHSAPGLS----------RP-HSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKS 977 (1082)
T ss_pred HhhccHHHHheeEEeCCHHHH-HHHHHhhhhc----------CC-CcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 689999999999986543222 2211100000 00 0112233333333221 1234556666778
Q ss_pred HHHHHHHHHhcCCCeEEeeCCCCccEEEEE-ecC----------C-----CCCCHHHHHHHHHhc-CcEeeeecCCCCCC
Q 010897 350 NARALREGLEKTGRFEILSKDVGVPLVAFS-LKD----------S-----SAHTVFEISEGLRKF-GWIVPAYTMPANAE 412 (498)
Q Consensus 350 ~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~-~~~----------~-----~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~ 412 (498)
+++++.+.|++.+ +.+..+ ..++++|. ++. . ...+..++++.|.++ |+.+...... .
T Consensus 978 rRd~L~e~L~~~G-i~v~~P--eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F---G 1051 (1082)
T PLN02672 978 RAERLKETLEACG-WDVLEP--QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT---G 1051 (1082)
T ss_pred HHHHHHHHHHHCC-CeEecC--CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc---C
Confidence 8999999999985 776543 46666663 210 0 024678999999876 8876543211 1
Q ss_pred CeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 413 NVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 413 ~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
..+++|+++.. +.+++++.++.|+++++
T Consensus 1052 ~~g~~RIsfa~--~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1052 IPGYCRFSFAL--EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 24689999973 66678777777776554
No 167
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=4.1e-20 Score=187.07 Aligned_cols=309 Identities=16% Similarity=0.114 Sum_probs=206.6
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+++|.+.+.+.+++.. ...|. .++... +++.+++.++++++ .+++|+|+++++.+++.++.++
T Consensus 43 ~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~----lr~~ia~~~~~~~~-----~I~it~G~~~al~~~~~~~~~~------ 105 (357)
T PRK14809 43 GPSPAAVEAIREAAER-VHSYP-KASHAD----LTAALADRWDVSPE-----QVWLANGGDGALDYLARAMLDP------ 105 (357)
T ss_pred CCCHHHHHHHHHHHhh-hhcCC-CCCHHH----HHHHHHHHhCCCcc-----eEEECCCHHHHHHHHHHHhcCC------
Confidence 4567777877776653 22232 234444 44556777777653 3899999999998888776442
Q ss_pred hcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHH
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
+++|++++++|..+...++..|++++.++++. +++.+|++++.+.+ +++++|++++|+||||.+.+.+++.
T Consensus 106 -------gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~ 177 (357)
T PRK14809 106 -------GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVE 177 (357)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHH
Confidence 46899999999999988999999999999863 45788888887766 3588999999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
++++...+ +++|++|++|+.+.. .+.....+ ..+++. +..+..|.+ +++.++||++..+ +.+ ..+..
T Consensus 178 ~l~~~~~~----~~~iI~De~y~~~~~---~~~~~~~~~~~~~vi-~~~SfSK~~~~~GlRiG~~~~~~-~~~-~~~~~- 246 (357)
T PRK14809 178 ALAERTDE----ETLVVVDEAYGEFAE---RPSAVALVEERDDVA-VLRTFSKAYGLAGLRLGYAVVPE-EWA-DAYAR- 246 (357)
T ss_pred HHHHhCcc----CcEEEEechhhhccC---CchhHHHHhhCCCEE-EEecchhHhcCcchhheeeecCH-HHH-HHHHH-
Confidence 99887532 689999999998752 11111111 123333 445667776 5889999998643 221 11110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
+ ...+ . ...+++.+++..+..+. +++..+...+.++++.+.|.... + + ++.+++.+++.
T Consensus 247 --~----~~~~----~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~-~~g~f~~~~~~- 306 (357)
T PRK14809 247 --V----NTPF----A---ASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----W-E-SAGNFVLAEVG- 306 (357)
T ss_pred --h----CCCC----C---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----C-C-CCCCEEEEECC-
Confidence 0 0011 1 23344666666554433 45555666667777778776532 2 2 25677777763
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+..++.+.|.++|+.+....... ...++|+++. +.++++++++.|++++
T Consensus 307 ----~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRls~~---~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 307 ----DASAVAEAAQERGVIVRDCTSFG---LPECIRITCG---TREETERAVEVLNEVL 355 (357)
T ss_pred ----CHHHHHHHHHHCCEEEEECccCC---CCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 45689999999998876543221 1357999986 5678888877777665
No 168
>PRK05839 hypothetical protein; Provisional
Probab=99.87 E-value=1.4e-19 Score=184.16 Aligned_cols=335 Identities=15% Similarity=0.033 Sum_probs=208.8
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHH
Q 010897 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (498)
Q Consensus 54 ~~p~~~~~~~~~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~l 132 (498)
|++.+++....+.. +++.+.+++.+.... ...|....+..++++.+.+++++.+|.+.+. ..+++|+|+++++.+
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~---~~I~it~G~~~al~~ 98 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE---NELIPTFGTREVLFN 98 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc---ceEEEecCcHHHHHH
Confidence 55666656555543 456677777665533 3334444566789999999999988865322 238999999999977
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhhCCeEEEEeec
Q 010897 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILG 211 (498)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~~t~~v~~~~~ 211 (498)
++.++... ..++.|+++.++|..+...++..|++++.++++ ++++.+|+++.+ + +++++|++++|
T Consensus 99 ~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP 164 (374)
T PRK05839 99 FPQFVLFD-----------KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP 164 (374)
T ss_pred HHHHHhcC-----------CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence 76655310 024689999999999999999999999999997 344777765432 2 46899999999
Q ss_pred cCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-cc-----ccCCCCeeEEEEcCCc-cCCC
Q 010897 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-----DFRLPLVKSINVSGHK-YGLV 281 (498)
Q Consensus 212 ~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~~-----~~~~~~~dsi~~s~hK-~l~~ 281 (498)
+||||.+.+ +++|.++|+++ |++|++|++|+.+...-..+.. .. +...+++ ++..|..| |+++
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~------~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~v-i~~~SfSK~~~~~ 237 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKH------DFILINDECYSEIYENTPPPSLLEASILVGNESFKNV-LVINSISKRSSAP 237 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHc------CCEEEeccchhhcccCCCCCCHhhhhcccCccccCcE-EEEeccccccCCc
Confidence 999999955 45566778889 9999999999986411000100 00 0012343 44567777 5889
Q ss_pred CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 282 p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
+.++||++.. ++.. +.+.....+... + ...+.|.++...+. .+-+++..++..++++.+.+.|
T Consensus 238 GlRiG~ii~~-~~~~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l-- 301 (374)
T PRK05839 238 GLRSGFIAGD-ASIL-KKYKAYRTYLGC--------A----SPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL-- 301 (374)
T ss_pred cceeEEEecC-HHHH-HHHHHHHhhcCC--------C----CChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc--
Confidence 9999999853 2221 211111111110 0 12223333333332 2334455666666666666654
Q ss_pred CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHh-cCcEeeeecC-CCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK-FGWIVPAYTM-PANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~-~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
+ .. .+++..++.++++ +..+++++|.+ +|+.+..... .....+.+++|+++.. +.+++++.++.|.
T Consensus 302 -~-~~---~p~gg~fi~~~~~-----~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~ 369 (374)
T PRK05839 302 -G-IT---IPPATFYVWLPVD-----NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIK 369 (374)
T ss_pred -C-CC---CCCeeEEEEEeCC-----ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 2 22 2335667777774 34588888865 8988754322 1111235789999963 4666666666665
Q ss_pred HHH
Q 010897 439 EVL 441 (498)
Q Consensus 439 ~~l 441 (498)
+++
T Consensus 370 ~~l 372 (374)
T PRK05839 370 TYL 372 (374)
T ss_pred HHh
Confidence 554
No 169
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=4.8e-20 Score=187.73 Aligned_cols=343 Identities=17% Similarity=0.110 Sum_probs=229.0
Q ss_pred Ccccc--cccCCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHH
Q 010897 58 LNLAS--FVTTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (498)
Q Consensus 58 ~~~~~--~~~~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~l 132 (498)
+++++ |.....+|.+.++..+++.+.......++ +...+..++.+.||+++|.+. .++.++|..||+.
T Consensus 105 l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~-------all~sSGy~AN~~ 177 (476)
T PLN02955 105 LLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED-------CLVCPTGFAANMA 177 (476)
T ss_pred EEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc-------EEEECChHHHHHH
Confidence 34454 33334578899999888887554433332 566667777888999999986 8888899999987
Q ss_pred HHHHHHHHHHHHHHhcCC--CCCCcEEEEcCCchhHHHHHHHHc----CCeeEEEEecCCccccCHHHHHHHhhh---CC
Q 010897 133 AGLAFKRKWQQKRKEQGK--PYDKPNIVTGANVQVCWEKFARYF----EVELKEVKLEEGYYVMNPVKAVELVDE---NT 203 (498)
Q Consensus 133 a~~a~~~~~~~~~~~~g~--~~~~~~Iv~s~~~h~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t 203 (498)
++.++...... ....+. ..+++.|++....|.|+...+++. ++++..++ ..|+++|+++++. +.
T Consensus 178 ~i~aL~~~~~~-~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~------HND~~~Le~~L~~~~~~~ 250 (476)
T PLN02955 178 AMVAIGSVASL-LAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR------HCDMYHLNSLLSSCKMKR 250 (476)
T ss_pred HHHHHhhcccc-ccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC------CCCHHHHHHHHHhCCCCc
Confidence 77665211000 000000 112457889999999999999987 45555544 2578999988854 34
Q ss_pred eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC-CCeeEEEEcCCccCCCC
Q 010897 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVY 282 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~-~~~dsi~~s~hK~l~~p 282 (498)
++|++-..-++.|.+.|+++|.++|++| |++++||+||+.++.+.........+++ +.+|++..+..|.++..
T Consensus 251 ~~Vv~EgV~SmdGdiapL~eL~~L~~~~------ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~ 324 (476)
T PLN02955 251 KVVVTDSLFSMDGDFAPMEELSQLRKKY------GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH 324 (476)
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHc------CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence 5565555567789999999999999999 9999999999987642211111112332 46888999999986433
Q ss_pred CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (498)
Q Consensus 283 ~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (498)
.|+++.+ ++.. .|+......+....+-+...+.+..++++.+..+ ..+.+++.++.++|.+. .+
T Consensus 325 --GGfi~gs-~~~~--------~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~G 388 (476)
T PLN02955 325 --GGFIACS-KKWK--------QLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---SG 388 (476)
T ss_pred --CceeecH-HHHH--------HHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---cC
Confidence 2444433 2211 2222222222222223333444455566555333 24667788888888874 23
Q ss_pred CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 363 RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+.+ ..+++.+.+.+ ......++++|.++|+.+....+|.+..+...+|++++..+|.++++++++.|.++.+
T Consensus 389 -~~~-----~sPI~pI~ig~--~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 389 -VDI-----SSPIISLVVGN--QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred -CCC-----CCCEEEEEeCC--HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHh
Confidence 432 36788777733 2356688999999999999888888888888999999999999999999999988865
Q ss_pred HH
Q 010897 443 EI 444 (498)
Q Consensus 443 ~l 444 (498)
.+
T Consensus 461 ~~ 462 (476)
T PLN02955 461 FD 462 (476)
T ss_pred hh
Confidence 43
No 170
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.87 E-value=2.1e-20 Score=189.67 Aligned_cols=323 Identities=19% Similarity=0.164 Sum_probs=211.9
Q ss_pred HHHHHHHHH--HhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 70 PECDKLVMA--SINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 70 ~~~~~~l~~--~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
+++.+.+.+ ........|....+..++++.+.+++.+-.|.+.+.+ ..+++++|+.+++..+...+...
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~~i~~~~G~~~~~~~~~~~~~~~------- 91 (363)
T PF00155_consen 21 PAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPE--ANILVTSGAQAALFLLLRLLKIN------- 91 (363)
T ss_dssp HHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGG--EGEEEESHHHHHHHHHHHHHHSS-------
T ss_pred HHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccc--eEEEEecccccchhhhhhccccc-------
Confidence 445554443 2222344566667788888887777775555554321 13677777777765555555211
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhh------CCeEEEEeeccCCcccccC
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED 220 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~ 220 (498)
.++.|++++++|..+...++..|++++.++++ ++++.+|+++|++.+++ ++++|+++.|+||||...+
T Consensus 92 -----~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~ 166 (363)
T PF00155_consen 92 -----PGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLS 166 (363)
T ss_dssp -----TTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--
T ss_pred -----ccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccc
Confidence 14689999999999999999999999999986 44589999999999987 5789999999999999866
Q ss_pred HHHHH---HHHHHhhcccCCCceEEEecCcccccccccCCCC---ccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCC
Q 010897 221 VKLLH---DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTK 293 (498)
Q Consensus 221 l~~I~---~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~---~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~ 293 (498)
.+++. ++|+++ ++++++|++|+.+.. ..+.. ...+....-..+..|..|.+ +.+.++||++...
T Consensus 167 ~~~l~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~- 237 (363)
T PF00155_consen 167 LEELRELAELAREY------NIIIIVDEAYSDLIF--GDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP- 237 (363)
T ss_dssp HHHHHHHHHHHHHT------TSEEEEEETTTTGBS--SSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH-
T ss_pred cccccchhhhhccc------ccceeeeeceecccc--CCCccCcccccccccccceeeeeccccccccccccccccchh-
Confidence 55555 459999 999999999998763 11111 11122111256777888854 5668899999733
Q ss_pred CCCCcccccc-cCccCCCCCCccccCCCchHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC
Q 010897 294 DDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (498)
Q Consensus 294 ~~l~~~~~~~-~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (498)
+.. +.+... ..+. + +......+...+...+ .+..++..+++.++++++.+.|++. ++.+..++
T Consensus 238 ~~~-~~l~~~~~~~~----------~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~ 303 (363)
T PF00155_consen 238 ELI-ERLRRFQRSGL----------S--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE 303 (363)
T ss_dssp HHH-HHHHHHHHHTT----------S--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS
T ss_pred hhh-hhhhhcccccc----------c--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc
Confidence 221 111100 0000 1 1111111112222212 1255778888888999999999988 48888663
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 371 VGVPLVAFSLKDSSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
.++++|...+. .+..++.++|.++ |+.+.....+.. ..++|+++ ...++++++++++.|
T Consensus 304 --~~~~~~~~~~~--~~~~~l~~~L~~~~gi~v~pg~~~~~---~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 304 --AGFFLWVRLDP--NDAEELAQELLEEYGILVRPGSYFGV---PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp --BSSEEEEEESH--HHHHHHHHHHHHHHTEEEEEGGGGTS---TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred --CccEEEEEccc--chHHHHHHHHHHhCCEEEEecCCCCC---CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 56666543221 1567999999998 998866544433 56799999 667899998877654
No 171
>PRK08175 aminotransferase; Validated
Probab=99.87 E-value=2.1e-19 Score=184.33 Aligned_cols=340 Identities=13% Similarity=0.049 Sum_probs=215.1
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcc-CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHH
Q 010897 58 LNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (498)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~l~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~ 135 (498)
+++....|.. +++.+.+.+.+.+.. ....|....+..++++.+.+++.+.+|++.+.. ..+++|+|+++++.+.+.
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~i~~t~G~~~~l~~~~~ 109 (395)
T PRK08175 32 IDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPE--SEAIVTIGSKEGLAHLML 109 (395)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEccCcHHHHHHHHH
Confidence 3344433332 234455555554432 234455556788899999999988778754321 138899999999987776
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeecc
Q 010897 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGS 212 (498)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~ 212 (498)
++.++ +++|++++++|..+...++..|++++.++++++ ..+++++++++++ ++++|++++|+
T Consensus 110 ~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i~~p~ 174 (395)
T PRK08175 110 ATLDH-------------GDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG--VDFFNELERAIRESYPKPKMMILGFPS 174 (395)
T ss_pred HhCCC-------------CCEEEEcCCCCcchHHHHHHcCCeEEEEecccC--CCcHHHHHHHHhhccCCceEEEEeCCC
Confidence 65432 468999999999988888999999999999754 2457888888763 68899999999
Q ss_pred CCcccccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC---CCeeEEEEcCCccC-CCCCCe
Q 010897 213 TLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL---PLVKSINVSGHKYG-LVYAGV 285 (498)
Q Consensus 213 t~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~---~~~dsi~~s~hK~l-~~p~g~ 285 (498)
||||.+.+. ++|.++|+++ ++++++|++|+.+.. ..........+ .....+..+..|.+ .++.++
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~------~i~ii~De~y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRi 246 (395)
T PRK08175 175 NPTAQCVELEFFEKVVALAKRY------DVLVVHDLAYADIVY--DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRI 246 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchHhhcc--CCCCCcchhcCCCcccCEEEEeeccccccCcchhh
Confidence 999999777 6888899999 999999999987642 11000100111 22345567888886 577889
Q ss_pred EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 286 g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
||++. +++.. +.+.....+.. .+. ....|.+++..+ .....++..+...++++++.+.|++.+
T Consensus 247 G~~~~-~~~l~-~~~~~~~~~~~---------~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~- 311 (395)
T PRK08175 247 GFMVG-NPELV-SALARIKSYHD---------YGT---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAG- 311 (395)
T ss_pred eeeeC-CHHHH-HHHHHHHhhcc---------cCC---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99874 33222 11111001100 111 111233333333 223345566667778889999999885
Q ss_pred eEEeeCCCCccEEEEEecCCC-CCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAFSLKDSS-AHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+.+..+. +.+++.+++++.- ..+..+++.+|. +.|+.+....... ..+.+++|+++. ...+.++..++.|.+++
T Consensus 312 ~~~~~p~-~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~-~~~~~~lRis~~--~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 312 WMVEMPK-ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG-DYGDTHVRFALI--ENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CcccCCC-EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC-cCCCCeEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 7655333 5778888885421 235678988765 6798775432211 123468999985 24555554444444444
No 172
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=180.83 Aligned_cols=321 Identities=18% Similarity=0.138 Sum_probs=211.0
Q ss_pred CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 66 ~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
..+.|++.++|.++-...-..|...+.+..+|+. +++++|... +.|+.+||+||.+++.+..++
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~----~ae~~g~~a-------~~Fv~sGT~aN~lal~~~~~~----- 73 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDPTTNALEQR----IAELFGKEA-------ALFVPSGTQANQLALAAHCQP----- 73 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHH----HHHHhCCce-------EEEecCccHHHHHHHHHhcCC-----
Confidence 3567888888876553333345666666666655 888998843 999999999999999998754
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHH--HHHcCCeeEEEEecCCccccCHHHHHHHhhhC------CeEEEEeeccCCccc
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKF--ARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGE 217 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~------t~~v~~~~~~t~tG~ 217 (498)
...|++...+|....+. ...++-..+.+.....++.+++++++..|..+ +.++++.+..|.-|+
T Consensus 74 --------~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt 145 (342)
T COG2008 74 --------GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT 145 (342)
T ss_pred --------CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCce
Confidence 35899999999987764 34454333333333245889999999988642 344444444446699
Q ss_pred ccCH---HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 218 FEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 218 ~~~l---~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+-|+ ++|.++||++ +++||+|||--.-++..+.+... + -...+|++++++.|.|+.|.| .+++-+++
T Consensus 146 Vy~l~el~~i~~~~k~~------~l~LHmDGAR~~nA~valg~~~~-~-~~~~~D~v~~~~tK~g~~~~g--Aiv~gn~~ 215 (342)
T COG2008 146 VYPLDELEAISAVCKEH------GLPLHMDGARLANALVALGVALK-T-IKSYVDSVSFCLTKGGGAPVG--AIVFGNRD 215 (342)
T ss_pred ecCHHHHHHHHHHHHHh------CCceeechHHHHHHHHHcCCCHH-H-HHhhCCEEEEecccCCcceee--eEEEcCHH
Confidence 8655 5677889999 99999999864333323332211 1 124699999999999877654 45545543
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (498)
.. +.+.+...-.++. .++. -.+.+++. -+|..+-++....|..+++++|.+.|++.+|+++..++ ..|
T Consensus 216 ~~-~~a~~~rK~~Ggl-------~~k~-r~laA~~~--~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~-~tN 283 (342)
T COG2008 216 FA-KRARRWRKRAGGL-------MRKA-RFLAAQGL--YALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPV-ETN 283 (342)
T ss_pred HH-HHHHHHHHHhccc-------Hhhh-hHHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCC-ccc
Confidence 32 2211111111111 1221 12333332 33455557888888888999999999988889998874 799
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+|.++++. ...+.|...|+.......-. .+....|++++..++++++++|+..++.++
T Consensus 284 ~vf~~l~~-------~~i~~l~~~~~~~~~~~~~~--~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 284 MVFVRLPE-------SAIEALRLAGALFYRGVLIG--AHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred EEEEECCh-------HHHHHHHhhchhheeeeecc--CCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 99998853 23367777776543311110 111469999999999999999999888764
No 173
>PLN02271 serine hydroxymethyltransferase
Probab=99.87 E-value=1.6e-19 Score=184.52 Aligned_cols=345 Identities=11% Similarity=0.030 Sum_probs=232.9
Q ss_pred CChHHHHHHHHHHhccCCC-------CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
.+++.+.+++-..+..-+. +|.......++|..+.+...++||++... ...-+-..+|+.||+.++.++.+
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~--~gaNVQp~SGs~AN~aV~~ALl~ 236 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEK--WGVNVQPYSCTSANFAVYTGLLL 236 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccc--cccceeeccHHHHHHHHHHHhcC
Confidence 4567777777655443221 12222345689999999999999987521 11234455889999888888754
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCC---chhHHH------HHHHHcCCeeEEEE--ecCCccccCHHHHHH-HhhhCCeEEE
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGAN---VQVCWE------KFARYFEVELKEVK--LEEGYYVMNPVKAVE-LVDENTICVA 207 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~---~h~~~~------~~~~~~g~~~~~v~--~~~~~~~~d~~~L~~-~i~~~t~~v~ 207 (498)
+ +++|+..+. .|.+.. +.+...|+.+..++ ++++++.+|.++|++ ++..+|++|+
T Consensus 237 P-------------GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 237 P-------------GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred C-------------CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEE
Confidence 3 467877554 454543 33466677766666 655568899999998 6677899888
Q ss_pred EeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 208 ~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
+....++ ...|+++|.++|+++ |+++++|+||..+.++.. ..+. -.+++|+++.++|||+.+|.| |+
T Consensus 304 ~g~Sayp--r~~D~~~i~eIAdev------GA~LmvD~AH~aGLIa~g--~~~s--P~~~aDvvt~TTHKtLrGPrG-G~ 370 (586)
T PLN02271 304 CGGSSYP--REWDYARFRQIADKC------GAVLMCDMAHISGLVAAK--ECVN--PFDYCDIVTSTTHKSLRGPRG-GI 370 (586)
T ss_pred ECchhcc--CcCCHHHHHHHHHHc------CCEEEEECcccccccccC--cCCC--CCcCCcEEEeCCcccCCCCCc-eE
Confidence 8666666 668999999999999 999999999965543211 1110 123699999999999999999 88
Q ss_pred EEEeCCCCCCccccc---------ccCccCC--CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010897 288 VVWRTKDDLPDELVF---------HINYLGS--DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~---------~~~yl~~--~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~ 356 (498)
+++++... +..... ..++... ......+++......+.++..+++......|++..++..++++.|.+
T Consensus 371 I~~r~~~~-~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~ 449 (586)
T PLN02271 371 IFYRKGPK-LRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALAS 449 (586)
T ss_pred EEeccccc-ccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 88765311 100000 0001000 00011344444445678888888877777789999999999999999
Q ss_pred HHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC--CCCeeEEEEeecCC----CCHHHH
Q 010897 357 GLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN--AENVAVLRVVVRED----FSRSLV 430 (498)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~--~~~~~~lRv~v~~~----~t~~~~ 430 (498)
.|.+.| |.++.......+|.+.+.+ .+++.....+.|.+-||.+...+.|.. ......+|+.+.+- +.++++
T Consensus 450 ~L~~~G-~~vv~ggTdnHlvLvDl~~-~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~ 527 (586)
T PLN02271 450 ALLRRK-CRLVTGGTDNHLLLWDLTT-LGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDF 527 (586)
T ss_pred HHHHCC-CeEeeCCCCcceeeecCcc-cCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHH
Confidence 999987 9998876567888888853 356788888899999998765554433 12235689986443 344677
Q ss_pred HHHHHHHHHHHH
Q 010897 431 ERLISHIEEVLK 442 (498)
Q Consensus 431 ~~l~~~l~~~l~ 442 (498)
+.+.+-|.++++
T Consensus 528 ~~iA~~i~~~~~ 539 (586)
T PLN02271 528 ETIADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHHHHh
Confidence 766666666665
No 174
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=1.7e-20 Score=188.15 Aligned_cols=309 Identities=15% Similarity=0.108 Sum_probs=195.6
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+++|.+.+++.++... ...|...+...++++. +++++|.+. ..+++||++++.+++.+...+
T Consensus 11 ~p~~~~~~a~~~~~~~-~~~Y~~~~~~~~L~~~----la~~~g~~~-------~~v~~~g~~a~~~~l~~~~~~------ 72 (333)
T PRK10534 11 RPSRAMLEAMMAAPVG-DDVYGDDPTVNALQDY----AAELSGKEA-------ALFLPTGTQANLVALLSHCER------ 72 (333)
T ss_pred CCCHHHHHHHHhccCC-CcccCCCHHHHHHHHH----HHHHhCCCe-------EEEeCchHHHHHHHHHHhcCC------
Confidence 4778888887765433 2233344555566555 788899875 678889999998888765332
Q ss_pred hcCCCCCCcEEEEcCCchhH-HHHH-HHHcC-CeeEEEEecCCccccCHHHHHHHhhh------CCeEEEEeeccCCccc
Q 010897 147 EQGKPYDKPNIVTGANVQVC-WEKF-ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~-~~~~-~~~~g-~~~~~v~~~~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~ 217 (498)
+++|+++.+.|.. +... +...+ ++++.++++++ +.+|+++|++++++ +|++|++++++ ||.
T Consensus 73 -------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 73 -------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAAD-GTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred -------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCCC-CCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 3578888888864 4322 34454 67777877654 89999999999976 58888888554 699
Q ss_pred ccCHHHH---HHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 218 FEDVKLL---HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 218 ~~~l~~I---~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+.|.++| .++|+++ ++++++|+||..+.......... .+ ....|.+.++.+|.+..+ +|+.++.+++
T Consensus 143 v~~~~~l~~i~~~~~~~------~~~lvvDEA~~~~~~~~~~~~~~-~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~ 212 (333)
T PRK10534 143 VLPREYLKQAWEFTRER------NLALHVDGARIFNAVVAYGCELK-EI-TQYCDSFTICLSKGLGTP--VGSLLVGNRD 212 (333)
T ss_pred ecCHHHHHHHHHHHHHc------CCeEEeeHHHHHHHHHHcCCCHH-HH-HhcCCEEEEEeEcCCCCc--ccceEEcCHH
Confidence 9777665 5678888 99999999986321100011111 11 012344556789966544 5644445544
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (498)
.+.....+...+ +.......+.+.+++..+.. ..+.+++..+.++++.+.|++++ +++..+ ..+
T Consensus 213 ~i~~~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~--~~n 276 (333)
T PRK10534 213 YIKRARRWRKMT-----------GGGMRQAGILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAG-ADVMRQ--DTN 276 (333)
T ss_pred HHHHHHHHHHHh-----------CCchhhHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCC-CccCCC--Cce
Confidence 321111111100 00000122334444444421 23445556667889999999985 876643 688
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
++.+++++ .+..++.+.|.++|+.++.+ ..+|++....+|.++++++++.|+.++
T Consensus 277 fv~~~~~~---~~~~~~~~~l~~~gi~v~~~---------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 277 MLFVRVGE---EQAAALGEYMRERNVLINAS---------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred EEEEECCc---hhHHHHHHHHHHcCeeecCC---------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 99888842 24568889999999987432 137888765679999999999988665
No 175
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=6.6e-20 Score=191.22 Aligned_cols=313 Identities=14% Similarity=0.086 Sum_probs=205.8
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~ 166 (498)
|....+...+++.+.+++.+.+|.+..- +...+++|+|+++++.+.+.++.++ ++.|++++++|..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v-~~~~Iiit~Ga~~al~~l~~~l~~p-------------Gd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF-DPNKLVLTAGATSANETLMFCLAEP-------------GDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc-ChHHeEEccChHHHHHHHHHHhCCC-------------CCEEEECCCCCCc
Confidence 4445577789999999998877743210 0123899999999998888877543 5789999999999
Q ss_pred HHHHHH-HcCCeeEEEEec-CCccccCHHHHHHHhhh------CCeEEEEeeccCCcccccC---HHHHHHHHHHhhccc
Q 010897 167 WEKFAR-YFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEET 235 (498)
Q Consensus 167 ~~~~~~-~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~ 235 (498)
+...+. ..|++++.||++ ++++.+|++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~---- 223 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK---- 223 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC----
Confidence 988777 589999999986 45688999999988864 6889999999999999965 55677788899
Q ss_pred CCCceEEEecCcccccccccCCCC----ccc-------c-CCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccc
Q 010897 236 GWDTPIHVDAASGGFIAPFLYPDL----EWD-------F-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 236 ~~~~~l~vD~A~~g~~~~~~~~~~----~~~-------~-~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
+++|++|++|+.+.. ..+.. ... . ..+++ .+..+..|.+ +++.++||++..++... ..+..
T Consensus 224 --~~~iI~DE~Y~~~~f--~~~~~~s~l~~~~~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~ 297 (468)
T PLN02450 224 --NIHLISDEIYSGTVF--DSPGFVSVMEVLKDRKLENTDVSNRV-HIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATK 297 (468)
T ss_pred --CcEEEEEcccccccc--CCCCcccHHHHhhhcccccCCCCCcE-EEEEeccccCCCCCccEEEEEECCHHHH-HHHHH
Confidence 999999999997642 11111 000 0 01233 4455777755 59999999986543211 11110
Q ss_pred ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc-EE
Q 010897 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-----GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LV 376 (498)
Q Consensus 303 ~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v 376 (498)
.. .+ +. ...+.|.++...+... -+++..++..+.++.+.+.|++.+ +.+..+ ..+ ++
T Consensus 298 ~~--------~~---~~---~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g-i~~~~~--~~g~fl 360 (468)
T PLN02450 298 MS--------SF---GL---VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG-IKCLKS--NAGLFC 360 (468)
T ss_pred Hh--------hc---CC---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCC--CceEEE
Confidence 00 00 00 1224455555555443 245566777778888999999885 765533 344 55
Q ss_pred EEEecCC---CCC-CHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 377 AFSLKDS---SAH-TVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 377 ~f~~~~~---~~~-~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.++++.. ... +..++.++|. +.|+.+.....- ...+.+++|+++.. .+.+++++.++.|+++++
T Consensus 361 wi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f-~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 361 WVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSC-HCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVE 429 (468)
T ss_pred EEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCcccc-CCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHH
Confidence 5676421 111 2345677765 479877433211 11235689999974 346777777777776664
No 176
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=4.3e-19 Score=183.89 Aligned_cols=337 Identities=10% Similarity=-0.023 Sum_probs=214.8
Q ss_pred CChHHHHHHHHHHhcc-CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
.+++.+.+++.+++.. ....|....+..++++.+.+|+.+..|++.+. ..+++|+|+++++.+++. +..+
T Consensus 48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~---~~I~it~G~~~al~~~~~-l~~~----- 118 (433)
T PRK06855 48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP---DDIIFFNGLGDAIAKIYG-LLRR----- 118 (433)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH---hHEEEcCcHHHHHHHHHH-hcCC-----
Confidence 4456677777776644 33456666788899999999998887876433 238999999999977763 3221
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHH-HHcCCeeEEEEecC-CccccCHHHHHHHhh--hCCeEEEEeeccCCcccccC-
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENTICVAAILGSTLTGEFED- 220 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~-~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~--~~t~~v~~~~~~t~tG~~~~- 220 (498)
+++|++++++|..+..+. ...|+.++.+++++ +++.+|+++|++++. ++++++++++|+||||.+.+
T Consensus 119 --------Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~ 190 (433)
T PRK06855 119 --------EARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPK 190 (433)
T ss_pred --------CCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCH
Confidence 468999999999877553 34588889999873 457899999999996 35788999999999999966
Q ss_pred --HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc--ccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCC
Q 010897 221 --VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDD 295 (498)
Q Consensus 221 --l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~--~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~ 295 (498)
+++|.++|+++ |+||++|++|+.+.. ....... .+.-+.-.++..|..|.+ +++.++||++..+...
T Consensus 191 ~~~~~l~~~a~~~------~~~II~De~Y~~l~~--~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~ 262 (433)
T PRK06855 191 EILREIVDIAREY------DLFIICDEIYNNIVY--NGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADK 262 (433)
T ss_pred HHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCch
Confidence 45677788999 999999999998752 1111111 111111225667888977 5899999999743111
Q ss_pred ---CCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 296 ---LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 296 ---l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
+.........+... . .. ...+.|.++...+.. +-+++..+...++++.+.+.|++++++.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~---~----~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~ 332 (433)
T PRK06855 263 DEVFKKYINSILNAKMI---E----VC---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNR 332 (433)
T ss_pred hhHHHHHHHHHHHhhcc---c----cC---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccC
Confidence 00000000000000 0 11 123456666666643 2345566666778888999998886666543
Q ss_pred CCCCccEEEE-EecCCC-------------------------CCCHHHHHHH-HHhcCcEeeeecCCCCCCCeeEEEEee
Q 010897 369 KDVGVPLVAF-SLKDSS-------------------------AHTVFEISEG-LRKFGWIVPAYTMPANAENVAVLRVVV 421 (498)
Q Consensus 369 ~~~~~~~v~f-~~~~~~-------------------------~~~~~~l~~~-L~~~G~~v~~~~~~~~~~~~~~lRv~v 421 (498)
+ ..++++| ++++.- ..+..+++.. +.+.|+.+.....-. .....+|+++
T Consensus 333 p--~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~--~~~~~~Rls~ 408 (433)
T PRK06855 333 T--NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC--TELNGFRVTL 408 (433)
T ss_pred C--CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC--CCCCceEEEE
Confidence 3 3454444 664310 0123455644 667898664322111 1123489999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 010897 422 REDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 422 ~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.. .+.+++++.++.|.+++++
T Consensus 409 ~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 409 LE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CC-CcHHHHHHHHHHHHHHHHH
Confidence 64 3677777766666666653
No 177
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.87 E-value=1.2e-19 Score=181.67 Aligned_cols=331 Identities=15% Similarity=0.084 Sum_probs=207.1
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (498)
.+++++.+++.++..|...+ ..|.....+|.+.++..+++++.. +...+.+++.+++|+++|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g~~~e----- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDSL--YDLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLGGPEE----- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCccc--cccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcCCCcc-----
Confidence 56788899888876544332 233334456777777777776632 4557888899999999999653
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc---CCchhHHHHHHHHcCCeeEEEEecCCccccCHHHH
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG---ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s---~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L 195 (498)
.+++++||++||..++.++.++ +++|+++ .+.|.++...++..|+++... .|++++
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~~-------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--------~~l~~l 131 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEPP-------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--------DELSEL 131 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCCC-------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--------CCHHHH
Confidence 2999999999999888887543 4678763 579999999999999875322 244554
Q ss_pred HHHhhhCCeEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEE
Q 010897 196 VELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (498)
Q Consensus 196 ~~~i~~~t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~ 272 (498)
+. .+++++|+++ +++++|.+ .|+++|.++|+++ +++++||+||+.++...........+ +.|.+.
T Consensus 132 ~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~------~~~livDEAy~~~~~~~~~~~~~~~~---~~divv 199 (346)
T TIGR03576 132 KK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK------EAIVLVDDASGARVRRLYGQPPALDL---GADLVV 199 (346)
T ss_pred hh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc------CCEEEEECCccccccccCCCCCHHHc---CCcEEE
Confidence 33 2457777664 67889998 7899999999999 99999999999875321111110111 357777
Q ss_pred EcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010897 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (498)
Q Consensus 273 ~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~ 352 (498)
.+.+|++ ++...|+++.+. +.+ + ++......+. ++-+.. .+++++..+.......+.+...++++
T Consensus 200 ~s~SKal-aG~r~G~v~~~~-~li-~-------~l~~~~~~~~--~s~~~~---~~~aa~~aL~~~~~~~~~~~l~~r~~ 264 (346)
T TIGR03576 200 TSTDKLM-DGPRGGLLAGRK-ELV-D-------KIKSVGEQFG--LEAQAP---LLAAVVRALEEFELSRIRDAFKRKEE 264 (346)
T ss_pred eccchhc-cccceEEEEeCH-HHH-H-------HHHHhhcCcc--cCccHH---HHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 8999964 445678887543 221 1 1222112222 121222 33333433322223444556666666
Q ss_pred HHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCC-HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCC-CHHHH
Q 010897 353 ALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHT-VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDF-SRSLV 430 (498)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~-t~~~~ 430 (498)
.+.+.+++ +.+..+ ..+++.+++++ .+ .....+.|.++|+.+....... ...+++|++++... ++.++
T Consensus 265 ~~~~~l~~---~~~~~~--~~~f~~~~~~~---~~~~~~~~~ll~~~gV~v~~~~~f~--~~~~~vRis~~~~~~~~~~~ 334 (346)
T TIGR03576 265 VYLRLFDK---LNVERT--PTGFVIKGVEE---EKLIEIGLDLLRNYGIITITAVGMP--GASKTLRFDLAAKDAERIGD 334 (346)
T ss_pred HHHHHHHh---CCCCcC--CCeEEEEeCCC---CCHHHHHHHHHHhCCEEEeCCcccC--CCCCeEEEEEecChHHhcCH
Confidence 66777764 333332 45677777743 22 3445566777898875432111 12458999998321 11268
Q ss_pred HHHHHHHHHHH
Q 010897 431 ERLISHIEEVL 441 (498)
Q Consensus 431 ~~l~~~l~~~l 441 (498)
++|++.|++.+
T Consensus 335 ~~~~~al~~~~ 345 (346)
T TIGR03576 335 DYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHHhcc
Confidence 88888887654
No 178
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.87 E-value=6.3e-19 Score=163.72 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=232.9
Q ss_pred HHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010897 74 KLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (498)
Q Consensus 74 ~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~ 153 (498)
+.+.++++.|..++ .+|...++-.++.+-+...|....+. . -++..+|+.+.-.|+.-+..+
T Consensus 30 ~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~---t-f~isgsGh~g~E~al~N~leP------------- 91 (385)
T KOG2862|consen 30 GRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ---T-FVISGSGHSGWEAALVNLLEP------------- 91 (385)
T ss_pred HHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc---e-EEEecCCcchHHHHHHhhcCC-------------
Confidence 34455666766543 46778888888888888888766431 1 233333444443343333222
Q ss_pred CcEEEEcCCchh--HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccC-HHHHHHHHH
Q 010897 154 KPNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-VKLLHDLLT 229 (498)
Q Consensus 154 ~~~Iv~s~~~h~--~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~-l~~I~~la~ 229 (498)
++++++-..... .+...++..|+++..|+.+.+ ....++.+.+.+.. ++++|+++++.+.||...| ++.+.++|+
T Consensus 92 gd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G-~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~ 170 (385)
T KOG2862|consen 92 GDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIG-QAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCH 170 (385)
T ss_pred CCeEEEEEechHHHHHHHHHHhhCceeeEEecCcc-cCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhh
Confidence 466766555444 455567899999999988875 57899999999976 4789999999999999999 677889999
Q ss_pred HhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCC--------CCcccc
Q 010897 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD--------LPDELV 301 (498)
Q Consensus 230 ~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~--------l~~~~~ 301 (498)
+| +++++||++.+-+..+|..++ .++|+.-..++|.+.+|+|.+.+.++++.. -+..+.
T Consensus 171 k~------~~lllVD~VaSlggt~F~mDe-------wgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~y 237 (385)
T KOG2862|consen 171 KH------EALLLVDTVASLGGTEFEMDE-------WGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFY 237 (385)
T ss_pred cC------CeEEEEechhhcCCccceehh-------hcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEE
Confidence 99 999999998876666665443 368999999999999999999977654321 111223
Q ss_pred cccCccCC----CCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC--Ccc-
Q 010897 302 FHINYLGS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVP- 374 (498)
Q Consensus 302 ~~~~yl~~----~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~- 374 (498)
++...+++ +...-....+.+...+.++.++|..+-++|+++.++++++++++|+..|+++| +++..... +.+
T Consensus 238 Fd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~~rlpt 316 (385)
T KOG2862|consen 238 FDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALG-LQLFVVDEELRLPT 316 (385)
T ss_pred EeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccceecChhhccCc
Confidence 33222222 11111223466666778889999999999999999999999999999999987 77655432 333
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC-CCCHHHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE-DFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~-~~t~~~~~~l~~~l~~~l~~ 443 (498)
+..+.. +.+.|..+++.++.+++.+..+....+ -...++||.+.. .-+.+.+++.++.|+..++.
T Consensus 317 vttv~v--p~gvDw~dVv~~~~~~~~vei~gglg~--~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 317 VTTVKV--PYGVDWKDVVAYAMSHYVVEIGGGLGP--TVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ceeeec--CCCCCHHHHHHHHHHhcCEEeccccCC--CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 333444 346899999999999865544333222 235689999854 45778888888888877764
No 179
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1e-19 Score=184.33 Aligned_cols=293 Identities=15% Similarity=0.088 Sum_probs=197.7
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|....+|+ .||++.|.+. +++++|+++|+.+++.++.++ +++|+++.+.|......
T Consensus 53 pt~~~Le~----~lA~leg~e~-------ivvt~gg~~Ai~~~l~all~~-------------Gd~Il~~~~~y~~~~~~ 108 (388)
T PRK08861 53 PNRGLLEQ----TLSELESGKG-------AVVTNCGTSALNLWVSALLGP-------------DDLIVAPHDCYGGTYRL 108 (388)
T ss_pred chHHHHHH----HHHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCchHHHHHH
Confidence 34445554 4899998643 999999999999888877432 47899999988854332
Q ss_pred ----HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 171 ----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 171 ----~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
....|++++.++ ..|+++++++++++|++|++++|+||||.+.|+++|.++|+++ ++++++|++
T Consensus 109 ~~~~~~~~gi~v~~vd------~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~vIvDea 176 (388)
T PRK08861 109 FNTRANKGDFKVQFVD------QSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAV------GALVAVDNT 176 (388)
T ss_pred HHHHHhcCCeEEEEEC------CCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 233466666664 1589999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
|+.+.. ..| .+ .++|.+..|.|||++++.+ .|+++.++++.. +.+.....+++.. ..
T Consensus 177 ~~~~~~--~~p---l~---~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~-~~~~~~~~~~G~~------------~~ 235 (388)
T PRK08861 177 FLTPVL--QKP---LE---LGADFVIHSTTKYINGHSDVIGGVLITKTKEHA-EELAWWGNCIGAT------------GT 235 (388)
T ss_pred cccccc--CCC---cc---cCCCEEEeecceeccCCCcceeEEEEecHHHHH-HHHHHHHhccCCC------------CC
Confidence 986532 111 12 2589999999999998876 576665554321 1111111122211 12
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~ 388 (498)
....| +...|-+.+..++++..+++..+.+.|++.|.+. |..+. ...++++|.+++. ....
T Consensus 236 p~~a~--l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~-~~~~ 312 (388)
T PRK08861 236 PFDSY--MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS-FEQL 312 (388)
T ss_pred hHHHH--HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC-HHHH
Confidence 22334 3345667788999999999999999999999764 33321 0245899999531 1123
Q ss_pred HHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 389 FEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 389 ~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
.++.+.|.--..... + ...|.. ....+.+|+||+- |+.|.|++||+++++.+.+.
T Consensus 313 ~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~~~~ 387 (388)
T PRK08861 313 KVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKAAEA 387 (388)
T ss_pred HHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHhc
Confidence 445555442111110 0 000110 1124689999984 78889999999999877653
No 180
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.87 E-value=2.3e-19 Score=184.86 Aligned_cols=355 Identities=13% Similarity=0.052 Sum_probs=219.0
Q ss_pred HHHHHHHHHHhhhccCCC-CCcccccccCC-ChHHHHHHHHHHhcc-----CCCCCcCCcchHHHHHHHHHHHHHHcCCC
Q 010897 39 KEAAYQVINDELMLDGNP-RLNLASFVTTW-MEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~-~~~~~~~~l~~~~~~-----n~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (498)
.+.+.+.+++.-..+..+ .+++....+.. +++.+.+.+.+++.. ....|...++..++++.+.+++.+..|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 445555554433222222 34555555543 456778888777664 23345556688889988888887777765
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCe-----------eEE
Q 010897 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-----------LKE 180 (498)
Q Consensus 112 ~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~-----------~~~ 180 (498)
.+. ..+++|+|+++++.+.+ .+.. .+++|++++|+|..+...++..|.. ++.
T Consensus 97 ~~~---~~I~it~Ga~~al~~l~-~~~~-------------~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 97 ISA---DEIFISDGAKCDTGNIL-DIFG-------------PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred CCh---hhEEECCCHHHHHHHHH-HhcC-------------CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeE
Confidence 433 24899999999987532 2222 1468999999999999999999987 889
Q ss_pred EEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccC
Q 010897 181 VKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (498)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~ 256 (498)
+++++ +++..|.+ .+++++|++++|+||||.+.+ +++|.++|+++ +++|++|++|+.+.. ..
T Consensus 160 v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~--~~ 225 (409)
T PRK07590 160 LPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN------GSLILFDAAYEAFIS--DP 225 (409)
T ss_pred eecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc------CeEEEEEccchhhcc--CC
Confidence 99873 33555532 257899999999999999965 55677788899 999999999998652 11
Q ss_pred CCCccccCCC---CeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccc------cccCccCCCCCCccccCCCchHHHH
Q 010897 257 PDLEWDFRLP---LVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELV------FHINYLGSDQPTFTLNFSKGSSQII 326 (498)
Q Consensus 257 ~~~~~~~~~~---~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~------~~~~yl~~~~~~~~l~~sr~~~~~~ 326 (498)
........++ ...++..|..|.+ .++.++||++..+ +.+ ..+. ....+....... . .....+
T Consensus 226 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~-~li-~~~~~~~~~~~~~~~~~~~~~~----~--~~~s~~ 297 (409)
T PRK07590 226 SLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK-ELK-GKTSDGEGVSLNSLWNRRQSTK----F--NGVSYI 297 (409)
T ss_pred CCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCH-HHh-hhccccchhhhHHHHHHHHhhc----c--cCcCHH
Confidence 1111011122 1234456788876 6899999998643 222 1000 000000000000 0 012234
Q ss_pred HHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEe
Q 010897 327 AQYYQFIRL---GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIV 402 (498)
Q Consensus 327 a~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v 402 (498)
.|.++...+ +...+++..+...++++.+.+.|++.+ +++..+. +.+++.+++++ ..+..++++.|. +.|+.+
T Consensus 298 ~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~-g~~f~wi~~~~--~~~~~~~~~~l~~~~gv~v 373 (409)
T PRK07590 298 VQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV-NAPYIWVKTPD--GMSSWDFFDKLLQEANVVG 373 (409)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC-cceEEEEECCC--CCCHHHHHHHHHHHCCEEE
Confidence 455444444 233455667777788889999999885 7665332 56677778754 356778888876 468876
Q ss_pred eeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 403 PAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 403 ~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
...... ...+..++|+++. .+.++++..++.|.+
T Consensus 374 ~pg~~f-~~~~~~~iRi~~~--~~~~~l~~~l~rl~~ 407 (409)
T PRK07590 374 TPGSGF-GPSGEGYFRLSAF--GSRENVLEAMERIKK 407 (409)
T ss_pred eChhHh-CCCCCCEEEEEcc--CCHHHHHHHHHHHHh
Confidence 433211 1233468999963 256666655554443
No 181
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.86 E-value=2e-19 Score=188.38 Aligned_cols=314 Identities=12% Similarity=0.056 Sum_probs=205.6
Q ss_pred CcCCcchHHHHHHHHHHHHHHcC--CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h 164 (498)
|..+.+..++++++.+++.+.+| .+.+. ..+++|+|+++|+.+++.++.++ ++.|+++.++|
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p---e~Ivit~Ga~~al~~l~~~l~~p-------------GD~Vlv~~P~Y 153 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDP---ERVVMSGGATGANETIMFCLADP-------------GDVFLIPSPYY 153 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh---hhEEEccchHHHHHHHHHHhCCC-------------CCEEEECCCCc
Confidence 44556778899999999998877 33221 23999999999999988887553 57899999999
Q ss_pred hHHHHHHH-HcCCeeEEEEecC-CccccCHHHHHHHhh------hCCeEEEEeeccCCcccccC---HHHHHHHHHHhhc
Q 010897 165 VCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVD------ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (498)
Q Consensus 165 ~~~~~~~~-~~g~~~~~v~~~~-~~~~~d~~~L~~~i~------~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~ 233 (498)
..+...++ ..|++++.|+++. +++.+|++++++++. .++++|++++|+||||.+.+ +++|.++|+++
T Consensus 154 ~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~-- 231 (496)
T PLN02376 154 AAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK-- 231 (496)
T ss_pred cchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc--
Confidence 99998777 5899999999963 457899999976542 36788999999999999976 55577888899
Q ss_pred ccCCCceEEEecCcccccccccCCCCcc------ccCC----CCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccc
Q 010897 234 ETGWDTPIHVDAASGGFIAPFLYPDLEW------DFRL----PLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 234 ~~~~~~~l~vD~A~~g~~~~~~~~~~~~------~~~~----~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
+++|++|++|+.++. ..+.... +... +....+..+..|.+ +++.++||++..++... .....
T Consensus 232 ----~i~lI~DEiY~~~~f--~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~ 304 (496)
T PLN02376 232 ----NIHLVVDEIYAATVF--AGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARK 304 (496)
T ss_pred ----CCEEEEEcCcccccc--CCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHH
Confidence 999999999998652 1111110 0000 11223456889976 68899999997543221 11100
Q ss_pred ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHH-HH----HHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY-KN----IMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 303 ~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~-~~----~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
. ..+ +. ...+.|+++...+....+ ++ ..+++.+..+.+.+.|++.+ ++++.+. ...++.
T Consensus 305 ----~----~~~---~~---vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~g-i~~~~~~-aG~flw 368 (496)
T PLN02376 305 ----M----SSF---GL---VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKAD-IACLTSN-AGLFAW 368 (496)
T ss_pred ----H----hhc---CC---CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-ceEEEE
Confidence 0 001 00 233456666655654333 33 34555667777888888865 6655432 445565
Q ss_pred EEecCC----CCC-CHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 378 FSLKDS----SAH-TVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 378 f~~~~~----~~~-~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
++++.. ... +..++.+.|.+ .|+.+.....- .....+++|+++.. ...++++..++.|++++..
T Consensus 369 i~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F-~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 369 MDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSF-RCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred EEchhhhccCCchhHHHHHHHHHHHcCCEEEeCcccc-CCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 677431 111 23578888776 48877543211 11234689999974 2456666666666666653
No 182
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=5.6e-19 Score=179.09 Aligned_cols=328 Identities=13% Similarity=0.122 Sum_probs=208.9
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g 149 (498)
++..+++.+++..++.. ...+ +.+++.+++++++|.+. +++|+|+++|+.+++.++.-.
T Consensus 11 ~~e~~a~~~~~~~~~~~-~~g~----~~~~~e~~la~~~g~~~-------~v~~~sgt~aL~~~l~al~~~--------- 69 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-GDGP----FSRRCETWLENRTGTKK-------ALLTPSCTAALEMAALLLDIQ--------- 69 (376)
T ss_pred HHHHHHHHHHHHcCCcc-CCcH----HHHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 44567777787775542 1223 33455566888888754 899999999998887765111
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHH
Q 010897 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (498)
Q Consensus 150 ~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~ 229 (498)
.+++|++++++|.+...++...|++++.++++++++.+|+++++++++++|++|+ +++++|...|+++|.++|+
T Consensus 70 ---pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~ 143 (376)
T TIGR02379 70 ---PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALAN 143 (376)
T ss_pred ---CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHH
Confidence 1479999999999999999999999999999977788999999999999998885 5678999999999999999
Q ss_pred HhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccccc-----
Q 010897 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI----- 304 (498)
Q Consensus 230 ~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~----- 304 (498)
++ |++|++|+|++.+.. +...... ....+.++++...|.+.++...|++++++++.......+..
T Consensus 144 ~~------~i~vIeDaa~~~g~~-~~~~~~g---~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~ 213 (376)
T TIGR02379 144 KH------QLFVIEDAAQGVMST-YKGRALG---SIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNR 213 (376)
T ss_pred HC------CCEEEEECccccCCc-cCCcccC---CCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCC
Confidence 99 999999999987542 1111110 11134455555556665544568888876644322111110
Q ss_pred -CccC-C-CC---CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEeeCCC--Cc
Q 010897 305 -NYLG-S-DQ---PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG--R-FEILSKDV--GV 373 (498)
Q Consensus 305 -~yl~-~-~~---~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~~~~--~~ 373 (498)
.+.. . .. ...+.++.-...++.-...+| +.+.+..++.++++++..+.|..++ + .++...++ ..
T Consensus 214 ~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~ 288 (376)
T TIGR02379 214 SQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQH 288 (376)
T ss_pred ccccccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCee
Confidence 0000 0 00 011111211112222122223 3456677778888888888887764 1 22221111 11
Q ss_pred --cEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCC-------------------CeeEEEEeecCCCCHHHHHH
Q 010897 374 --PLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAE-------------------NVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 374 --~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~-------------------~~~~lRv~v~~~~t~~~~~~ 432 (498)
.++.++++. ..+..++.+.|.++|+....+..|.... ....+.+-++...|.+++++
T Consensus 289 ~~~~~~i~~~~--~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~ 366 (376)
T TIGR02379 289 NAHMFYIKLKD--EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR 366 (376)
T ss_pred eeEEEEEEECC--cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence 234445532 2467899999999998764332221110 02356676777889999998
Q ss_pred HHHHHHHHH
Q 010897 433 LISHIEEVL 441 (498)
Q Consensus 433 l~~~l~~~l 441 (498)
.++.|++++
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 888887754
No 183
>PRK05968 hypothetical protein; Provisional
Probab=99.86 E-value=1.4e-19 Score=184.40 Aligned_cols=284 Identities=18% Similarity=0.131 Sum_probs=195.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
++.+.+++++|.+. .+++++|+.|+.+++.+..++ +++|+++.+.|.. +...++..
T Consensus 67 ~le~~lA~l~g~~~-------av~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 126 (389)
T PRK05968 67 AFEEMLAKLEGAED-------ARGFASGMAAISSTVLSFVEP-------------GDRIVAVRHVYPDAFRLFETILKRM 126 (389)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHHHc
Confidence 44455899999864 566677888998887665332 4689998888774 44667778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|++++++++ ++|++|++.+|+++++.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 127 G~~v~~vd~------~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~------gi~vivD~a~a~~~~-- 191 (389)
T PRK05968 127 GVEVDYVDG------RDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRH------GVVTMIDNSWASPVF-- 191 (389)
T ss_pred CceEEEeCC------CCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECCCcchhc--
Confidence 999888864 2789999888 5789999999999999999999999999999 999999999976542
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ . . .++|.+..|.+|++.++.+ .|+++ .+++.+.........+++.. ...+.+|..+
T Consensus 192 ~~p-~--~---~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~~------------~~~~~A~~~l 252 (389)
T PRK05968 192 QRP-I--T---LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGAK------------LSPFEAWLLL 252 (389)
T ss_pred cCc-h--h---cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCCC------------CChHHHHHHH
Confidence 111 1 1 2578999999999988765 56555 44433211111111222211 1123333333
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-----------CCccEEEEEecCCCCCCHHHHHHHHHhcCcE
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-----------VGVPLVAFSLKDSSAHTVFEISEGLRKFGWI 401 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~ 401 (498)
+. -+.+..++++..++++++.+.|+++|.++.+..| ...++++|.+++ +.+..+++++|...++.
T Consensus 253 ~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--~~~~~~f~~~L~~~~~~ 328 (389)
T PRK05968 253 RG--LRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--GIDVRAFADALKLFRLG 328 (389)
T ss_pred cc--cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC--HHHHHHHHHhCCccEEe
Confidence 33 3456788999999999999999999987654422 124599999963 34677898998776643
Q ss_pred eeeec-----CCCC-------------CC--CeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYT-----MPAN-------------AE--NVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 402 v~~~~-----~~~~-------------~~--~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++-.. .|.. .. ..+.+|+|++. |+.+.|++||+++++..
T Consensus 329 ~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 329 VSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL----EGTEALWADLEQALAAA 387 (389)
T ss_pred cCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHh
Confidence 32110 0110 11 14689999985 67788899999988753
No 184
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=1.3e-18 Score=167.13 Aligned_cols=331 Identities=13% Similarity=0.094 Sum_probs=232.1
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|++.+++.+.++...++|. -...++-+++..|.++..++.... ..+.++.|.--++.++++++.++
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~---e~i~~~p~VVpgi~~~I~~~T~~------- 106 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP---EWIVFVPGVVPGISLAIRALTKP------- 106 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc---ceEEEcCcchHhHHHHHHHhCcC-------
Confidence 468899999999998766665 345567789999999999998754 34888889999998888888664
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEec--CCccccCHHHHHHHhhhC-CeEEEEeeccCCcccc---cCH
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDEN-TICVAAILGSTLTGEF---EDV 221 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~--~~~~~~d~~~L~~~i~~~-t~~v~~~~~~t~tG~~---~~l 221 (498)
++.|++..|.|+.+.++....|-++...|+. ++.|.||.++|++.+.+. ++++++|+|.||+|.+ +.+
T Consensus 107 ------gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 107 ------GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred ------CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHH
Confidence 5789999999999999999999999999985 456889999999888764 6899999999999999 678
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-ccc-cC--CCCeeEEEEcCCc-cCCCCCCeEEEEEeCCCCC
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWD-FR--LPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~~~-~~--~~~~dsi~~s~hK-~l~~p~g~g~~~~~~~~~l 296 (498)
.+|.+||++| |+.|+.|+.|+.++. ..... ... .. .....+.+.++.| |-.++..++.+++.+++..
T Consensus 181 ~~i~elc~kh------~v~VISDEIHaDlv~--~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr 252 (388)
T COG1168 181 RKIAELCLRH------GVRVISDEIHADLVL--GGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR 252 (388)
T ss_pred HHHHHHHHHc------CCEEEeecccccccc--cCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH
Confidence 8899999999 999999999998764 11111 110 11 1122334445566 5566778888888776431
Q ss_pred CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeeCCCCccE
Q 010897 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGRFEILSKDVGVPL 375 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~~ 375 (498)
..+..+....+. +..+.+.+++.-++. ..|.+-+.+..+.+..+.+++.+.|.+ +|++++..+. +.-+
T Consensus 253 -~~~~~~l~~~~~--------~~~n~lg~~A~~aAY-~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~-gTYL 321 (388)
T COG1168 253 -AKFLKRLKRNGL--------HGPSALGIIATEAAY-NQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ-GTYL 321 (388)
T ss_pred -HHHHHHHHHhcC--------CCCchHHHHHHHHHH-HhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCC-Ccee
Confidence 111111111111 111123333333333 346777889999999999999999986 6788887664 4445
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 376 VAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
....++. -+++..++.+.|.++..+...........+.+++|+-+.. ++.-.++.++.|+
T Consensus 322 ~WLD~r~-l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac--pr~~L~eal~ri~ 381 (388)
T COG1168 322 AWLDCRE-LGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC--PRAILEEALERLK 381 (388)
T ss_pred eeeeccc-cCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC--CHHHHHHHHHHHH
Confidence 5556643 3467779999988877665433333334667899998764 5554443333333
No 185
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.85 E-value=2e-19 Score=179.99 Aligned_cols=274 Identities=16% Similarity=0.073 Sum_probs=186.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++++++++++|.+.+ ..++|+|+++++..+..++ .. + .|++++++|..+...++..|+++
T Consensus 51 ~lr~~la~~~~~~~~-----~i~~t~G~~~~i~~~~~~l-~~-------------g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 51 ELRAAAAAYYGLPAA-----SVLPVNGAQEAIYLLPRLL-AP-------------G-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HHHHHHHHHhCCChh-----hEEECCCHHHHHHHHHHHh-CC-------------C-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 566678888887642 3889999999987654332 11 2 68899999999999999999998
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
+.++ |++.+++.+. ++++|++++|+||||.+.+ +++|.++|+++ |+++++|++|+++...
T Consensus 111 ~~~~--------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~-- 173 (330)
T TIGR01140 111 VELP--------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPETLLALAARLRAR------GGWLVVDEAFIDFTPD-- 173 (330)
T ss_pred EEeC--------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc------CCEEEEECcccccCCc--
Confidence 8887 7888998884 5778999999999999988 66677888889 9999999999887521
Q ss_pred CCCCccccCCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH
Q 010897 256 YPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 256 ~~~~~~~~~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~ 334 (498)
+..........-+.+..+.+|+++ .+.++||++.+++ .+ ..+. .+. ..++ ...++|.++...
T Consensus 174 -~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~---~~~----~~~~-------~s~~~q~~~~~~ 236 (330)
T TIGR01140 174 -ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLR---EAL----GPWT-------VNGPARAAGRAA 236 (330)
T ss_pred -cchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHH---hcC----CCCC-------chHHHHHHHHHH
Confidence 111100111123567789999875 6677899986432 22 1111 011 0111 233456666666
Q ss_pred hcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 335 LGFEGY-KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 335 lg~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
+...++ +...++..++++++.+.|++++.+++.+. ..+++.+.++ +..+++++|.++|+.+......+ ..+
T Consensus 237 l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~f~~~~~~-----~~~~l~~~l~~~gi~v~pg~~f~-~~~ 308 (330)
T TIGR01140 237 LADTAWQAATRARLAAERARLAALLARLGGLEVVGG--TALFLLVRTP-----DAAALHEALARRGILIRDFDNFP-GLD 308 (330)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCeEEEEEcC-----CHHHHHHHHHHCCEEEEECCCCC-CCC
Confidence 655444 56677777899999999999986665432 4455555553 34689999999999876543321 123
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
..++|+++.. ..+.++|+..|
T Consensus 309 ~~~iRi~~~~---~~~~~~~~~~l 329 (330)
T TIGR01140 309 PRYLRFALPT---DEENDRLEEAL 329 (330)
T ss_pred CCEEEEEecC---HHHHHHHHHhh
Confidence 4689999873 33336666554
No 186
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=4.9e-19 Score=177.60 Aligned_cols=299 Identities=16% Similarity=0.187 Sum_probs=201.5
Q ss_pred CChHHHHHHHHHHhcc-CCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
++++.+.+.+.+++.. +...|. .++...+ ++++++++|++.+ .+++|+|+++++.+.+.++ .
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~l----r~~ia~~~~~~~~-----~I~~t~G~~~~l~~~~~~~--~----- 93 (337)
T PRK03967 31 DLPEELKEEIFEELKRVPFNRYP-HITSDPL----REAIAEFYGLDAE-----NIAVGNGSDELISYLVKLF--E----- 93 (337)
T ss_pred CCCHHHHHHHHHHhhcCccccCC-CCCHHHH----HHHHHHHhCcCcc-----eEEEcCCHHHHHHHHHHHh--C-----
Confidence 4557788888777754 233333 2344444 4457777787653 3889999999987655443 1
Q ss_pred HhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHH
Q 010897 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
++.|+++.++|..+..+++..|++++.++++++ +.+|++.+++.+ ++++++++++|+||||.+.+.++|.
T Consensus 94 --------gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~ 163 (337)
T PRK03967 94 --------GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED-FTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEIL 163 (337)
T ss_pred --------CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 368999999999999999999999999999764 789999998875 5688888999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCC-CCCCeEEEEEeCCCCCCcccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFH 303 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~-~p~g~g~~~~~~~~~l~~~~~~~ 303 (498)
+++ ++ ++++++|++|+.+.. ....... ..+++ .+..|..|.++ ++.++||++..+ +.+ +.+..
T Consensus 164 ~i~-~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~iv~~~-~~i-~~~~~- 228 (337)
T PRK03967 164 KVL-ET------GKPVVLDEAYAEFSG----KSLIGLIDEYPNL-ILLRTFSKAFGLAGIRAGYAIANE-EII-DALYR- 228 (337)
T ss_pred HHH-hc------CCEEEEECchhhhcc----cchHHHHhhCCCE-EEEecchHhhcchhhhheeeecCH-HHH-HHHHh-
Confidence 998 47 899999999987641 1110011 12343 45567888765 889999998632 221 11110
Q ss_pred cCccCCCCCCccccCCCchHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecC
Q 010897 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (498)
Q Consensus 304 ~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (498)
+ ...+ + ...++|.++...+. .+.+.+..+...+.++.+.+.|.+.. . +++.+++.+.+
T Consensus 229 --~----~~~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~--~~~~~~~~~~~-- 287 (337)
T PRK03967 229 --I----KPPF----S---LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEYA----Y--PSDANFLLLKL-- 287 (337)
T ss_pred --h----cCCC----C---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccCc----C--CCCCcEEEEhH--
Confidence 0 0111 1 12345555554443 23445556666777788888887642 2 22556665543
Q ss_pred CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 383 SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 383 ~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+.+.|.++|+.++.. +. ...+++|++++ +.++.++|++.|+.+.+
T Consensus 288 -------~~~~~l~~~gi~v~~~--~~--~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 -------DAYDYLLENGIVVRKL--SG--RLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred -------HHHHHHHHCCEEEEeC--CC--CCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 3788999999887643 11 23458999987 66788888888877654
No 187
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.4e-18 Score=178.55 Aligned_cols=300 Identities=17% Similarity=0.097 Sum_probs=195.1
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH----HHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~----~~~ 174 (498)
++.+.+|++.|.+. .++|++|++|+.+++.++..+ +++||++...|.+...+. ...
T Consensus 68 ~le~~lA~l~g~~~-------av~~sSGt~Al~~al~~ll~~-------------Gd~Vi~~~~~y~~t~~~~~~~l~~~ 127 (433)
T PRK08134 68 VLEERVAALEGGVG-------AIATASGQAALHLAIATLMGA-------------GSHIVASSALYGGSHNLLHYTLRRF 127 (433)
T ss_pred HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCccHHHHHHHHHHHhhC
Confidence 34445899999764 789999999999888776321 468999999887654433 457
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++++ |+++++++|+++|++|++.+++|++|.+.|+++|+++|+++ |++++||++++.+..
T Consensus 128 Gi~v~~vd~~------d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~------gi~livD~t~a~~~~-- 193 (433)
T PRK08134 128 GIETTFVKPG------DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEA------GVPLLVDSTFTTPYL-- 193 (433)
T ss_pred CeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9998888863 79999999999999999999999999999999999999999 999999999976532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCC-CCcc--c-ccccCccCC--C--CC-----Ccc-----
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDD-LPDE--L-VFHINYLGS--D--QP-----TFT----- 315 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~-l~~~--~-~~~~~yl~~--~--~~-----~~~----- 315 (498)
..| + ..++|.++.|+|||++++.. +|.+++..... .... + .....+.+. . .. .+.
T Consensus 194 ~~p-----l-~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 267 (433)
T PRK08134 194 LRP-----F-EHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARR 267 (433)
T ss_pred CCc-----h-hcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHH
Confidence 111 1 13699999999999876543 56665542211 0000 0 001111000 0 00 000
Q ss_pred ----ccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------C-Ccc
Q 010897 316 ----LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------V-GVP 374 (498)
Q Consensus 316 ----l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~~~ 374 (498)
..|.. ..... +.+...|-+.+..++++..+++..+.+.|+++|.+. +..+. . ..+
T Consensus 268 ~~~~~~G~~--ls~~~--A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg 343 (433)
T PRK08134 268 EGLRDFGAC--LSPMN--AWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGS 343 (433)
T ss_pred HHHHhcCCC--CCHHH--HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCce
Confidence 00100 11122 223334556788999999999999999999998754 22211 0 246
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCC--------------CCCCeeEEEEeecCCCCHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPA--------------NAENVAVLRVVVREDFSRSLVERLI 434 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~--------------~~~~~~~lRv~v~~~~t~~~~~~l~ 434 (498)
+++|.+++. .....++.+.|.--....+ + .+.|. ..-..+.+|+||+- |+.+.|+
T Consensus 344 ~~s~~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dli 418 (433)
T PRK08134 344 VFSFDLKGG-RAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDLI 418 (433)
T ss_pred EEEEEecCC-HHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHH
Confidence 899998632 1224456665543221100 0 00110 01124679999984 7888899
Q ss_pred HHHHHHHHHHHcC
Q 010897 435 SHIEEVLKEIESL 447 (498)
Q Consensus 435 ~~l~~~l~~l~~~ 447 (498)
+||+++++.+++.
T Consensus 419 ~dl~~Al~~~~~~ 431 (433)
T PRK08134 419 DDLKRALKAAEKA 431 (433)
T ss_pred HHHHHHHHhhhhc
Confidence 9999999876544
No 188
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=2.2e-19 Score=183.12 Aligned_cols=285 Identities=16% Similarity=0.114 Sum_probs=191.8
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH----HHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~----~~~ 174 (498)
++.+.+++++|.+. .+++++|+.|+..++.++.++ +++|+++.+.|......+ ...
T Consensus 65 ~Le~~lA~l~G~~~-------al~~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 65 LFEERMAVLEGGEE-------ALAFGSGMAAISATLIGFLKA-------------GDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 34445899999753 677777788887777666432 468999998877554443 344
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|+++..++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 125 gi~~~~~~~------~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~------g~~vivD~a~a~~~--- 189 (386)
T PRK06767 125 MITHSFCDM------ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRN------GLLVIVDNTFCSPY--- 189 (386)
T ss_pred CeEEEEeCC------CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHc------CCEEEEECCCcccc---
Confidence 655554432 478999999998999999999999999999999999999999 99999999997543
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
....+ . .++|++..|.+|++.++.+ .|+++.+++ .+..........+++ .- ..+.+|+.+
T Consensus 190 ~~~pl--~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g~---------~~---~~~~a~l~~ 251 (386)
T PRK06767 190 LQRPL--E---LGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIGG---------IM---APFDAWLLL 251 (386)
T ss_pred cCCch--h---cCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhCC---------CC---CHHHHHHHH
Confidence 11111 1 2579999999999976654 477775542 221111111111111 11 122344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC----------CCccEEEEEecCCCCCCHHHHHHHHHhcCcEe
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD----------VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIV 402 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----------~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v 402 (498)
+.+ +.+..++++..++++++.+.|+++|+++.+.-| ...++++|.+++. ..+..++.++|...++.+
T Consensus 252 ~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-~~~~~~f~~~l~~~~~~~ 328 (386)
T PRK06767 252 RGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-KEETQAFINDLHFITIAV 328 (386)
T ss_pred cCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC-HHHHHHHHHhCCccEEec
Confidence 433 345678899999999999999999988744311 1357999999632 235678888887766433
Q ss_pred eee------cCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 403 PAY------TMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 403 ~~~------~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+-. +.|.. .-..+.+|+||+- |+.+.|++||+++++.
T Consensus 329 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 329 SLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 210 01110 1124689999984 7888899999998864
No 189
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.85 E-value=9.2e-19 Score=180.95 Aligned_cols=337 Identities=15% Similarity=0.092 Sum_probs=208.4
Q ss_pred HHHHHHHHHHhccCC-----CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 010897 70 PECDKLVMASINKNY-----VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~-----~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~ 144 (498)
+.+.+++.+.++... ..|....+..++++.+.+++.+..|.+.+. ..+++|+|+++++.+++.++.+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~---~~I~it~Ga~~al~~~~~~l~~~---- 120 (416)
T PRK09440 48 DYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP---QNIALTNGSQSAFFYLFNLFAGR---- 120 (416)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccChHHHHHHHHHHHhcc----
Confidence 456777777665421 234444567889999999998887876433 23999999999998888776431
Q ss_pred HHhcCCCCCCcEEEE-cCCchhHHHHHHHHcC----CeeEEEEecCC--ccccCHHHHHHHhhhCCeEEEEeeccCCccc
Q 010897 145 RKEQGKPYDKPNIVT-GANVQVCWEKFARYFE----VELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (498)
Q Consensus 145 ~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g----~~~~~v~~~~~--~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~ 217 (498)
+.+..++.|++ .+++|..+...+...+ ..+..++++++ .+.+|+++|+ +.++++++++++|+||||.
T Consensus 121 ----~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~ 194 (416)
T PRK09440 121 ----RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGN 194 (416)
T ss_pred ----ccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCc
Confidence 00011357888 6999999888665443 23344444433 3679999997 4667889999999999999
Q ss_pred ccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 218 FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 218 ~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+.+ +++|.++|+++ +++|++|++|+.+............ ..+++ ++..|..|+++++.++||++.. ++
T Consensus 195 ~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~v-I~~~SfSK~~~pGlRiG~~i~~-~~ 265 (416)
T PRK09440 195 VLTDEELEKLDALARQH------NIPLLIDNAYGPPFPGIIFSEATPL-WNPNI-ILCMSLSKLGLPGVRCGIVIAD-EE 265 (416)
T ss_pred cCCHHHHHHHHHHHHHc------CCcEEEeCCccccCCCcchhhcCcc-ccCCe-EEEecccccCCCcceEEEEeCC-HH
Confidence 966 66788888999 9999999999754211100000000 01233 3446888998899999998743 22
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHH-----HHHHHHHHHHHHHHHHhcC-C--CeEE
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKN-----IMENCMGNARALREGLEKT-G--RFEI 366 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~-----~~~~~~~~a~~l~~~L~~~-~--~~~~ 366 (498)
.+ +.+.....+. . . ....+.|.++...+....+.+ ..+...+.++.+.+.|++. + ++.+
T Consensus 266 l~-~~~~~~~~~~-------~--~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~ 332 (416)
T PRK09440 266 II-EALSNMNGII-------S--L---APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLI 332 (416)
T ss_pred HH-HHHHHHHHHh-------c--c---CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEE
Confidence 21 1111100000 0 0 123345666665554333332 2333344555666666543 2 2554
Q ss_pred eeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeec-C-CCCCC----CeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYT-M-PANAE----NVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~-~-~~~~~----~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
..+ .+..++.+.+++. ..+..++.+.|.++|+.+.... + +.... ..+++|+++.. +.+++++.++.|+++
T Consensus 333 ~~p-~gg~fiw~~~~~~-~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~ 408 (416)
T PRK09440 333 HKP-EGAIFLWLWFKDL-PITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEE 408 (416)
T ss_pred ecC-CCceEEEEECCCC-CCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHHHHHHHHH
Confidence 433 2456666677431 2467789999999998875432 1 11000 13589999963 678898888888888
Q ss_pred HHHHH
Q 010897 441 LKEIE 445 (498)
Q Consensus 441 l~~l~ 445 (498)
++.+.
T Consensus 409 ~~~~~ 413 (416)
T PRK09440 409 VEKAY 413 (416)
T ss_pred HHHHh
Confidence 76543
No 190
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.85 E-value=6.3e-19 Score=180.07 Aligned_cols=288 Identities=17% Similarity=0.123 Sum_probs=190.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~ 174 (498)
++.+.+|+++|.+. ...+++|+.|+..++.+..++ +++|+++.+.|.+.. ..+...
T Consensus 69 ~Le~~lA~l~G~~~-------~~~~~sG~~Ai~~~l~~~l~~-------------Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 69 MFEKRMCALEGAED-------ARATASGMAAVTAAILCQVKA-------------GDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred HHHHHHHHHhCCCe-------eeEecCHHHHHHHHHHHHhCC-------------CCEEEEcCCchhHHHHHHHHHHhhc
Confidence 44455999999875 456778888987766654332 468999998888543 344567
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++ .+|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |++++||++|+.+..
T Consensus 129 G~~v~~vd------~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~------gi~lvvD~a~a~~~~-- 194 (398)
T PRK07504 129 GIESTLVD------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQA------GAKLVVDNVFATPLF-- 194 (398)
T ss_pred CeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 88888874 2789999999999999999999999999999999999999999 999999999986542
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..+ . . .++|++..|.|||+.++ .+.|++++.+++.+...+. .+... .+.. .....+|.+++
T Consensus 195 ~~~-~--~---~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~-------~g~~--~s~~~A~~~l~ 256 (398)
T PRK07504 195 QKP-L--E---LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH-------TGPS--LSPFNAWTLLK 256 (398)
T ss_pred CCc-h--h---hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH-------hCCC--CCHHHHHHHHh
Confidence 111 1 1 15899999999999664 3465555555433321111 01000 0111 12233444443
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC----C-----------CccEEEEEecCCCCCCHHHHHHHHHh
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD----V-----------GVPLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----~-----------~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
+.+.+..++++..++++++.+.|++.|++. +..+. + ..++++|.+++. .....++.+.|.-
T Consensus 257 --~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~~~~~l~~ 333 (398)
T PRK07504 257 --GLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG-KEAAFRFLNALKI 333 (398)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC-HHHHHHHHHhCCc
Confidence 345567888999999999999999988764 33221 0 256999999632 1223456665543
Q ss_pred cCcEee-----ee-cCCC--------------CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 398 FGWIVP-----AY-TMPA--------------NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 398 ~G~~v~-----~~-~~~~--------------~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
-....+ +. ..|. ..-..+.+|+||+- |+.+.|++||+++++.++
T Consensus 334 ~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 334 VRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred ceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 221110 00 0110 01124689999984 678888999999987643
No 191
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6e-19 Score=180.25 Aligned_cols=289 Identities=19% Similarity=0.142 Sum_probs=194.4
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
++.+.++++.|.+. .+++++|++|+.+++.++.++ +++|+++.+.|.. +...++..
T Consensus 64 ~Le~~lA~l~g~~~-------~v~~~sG~~Ai~~~l~all~p-------------GD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 64 LLGEALAELEGGAG-------GVITATGMGAINLVLNALLQP-------------GDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred HHHHHHHHHhCCCc-------eEEEcCHHHHHHHHHHHHhCC-------------CCEEEEccCCchHHHHHHHHHHHhc
Confidence 45566899988753 677777889998888777432 4689999998875 45556666
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++|+++++++|++|++++|+||||.+.|+++|.++|+++ |++++||++|+...
T Consensus 124 g~~v~~v~~------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~------gi~vIvD~a~a~~~--- 188 (405)
T PRK08776 124 HFALITADL------TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV------GALTVVDNTFLSPA--- 188 (405)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCCcccc---
Confidence 777777753 478999999988999999999999999999999999999999 99999999997542
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..... . .++|.+..|+|||++++.+ .|+++.++++.. +.+.....+.+ .. ...+.+|..+
T Consensus 189 ~~~pl--~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~-~~l~~~~~~~g----------~~--~s~~~a~l~~ 250 (405)
T PRK08776 189 LQKPL--E---FGADLVLHSTTKYINGHSDVVGGAVVARDAELH-QQLVWWANALG----------LT--GSPFDAFLTL 250 (405)
T ss_pred cCCcc--c---ccCCEEEecCceeecCCCCceEEEEEeCCHHHH-HHHHHHHHhcC----------CC--CCHHHHHHHH
Confidence 11111 1 2578999999999988765 577766554322 21111111111 10 1233344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.+.+.+..++++..+++..+.+.|++.|.+. +..+. ...++++|.+++. .....++.+.|.
T Consensus 251 --~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~ 327 (405)
T PRK08776 251 --RGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGG-EAAVRAFVDGLR 327 (405)
T ss_pred --hhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCC-HHHHHHHHHhCC
Confidence 3445678899999999999999999998764 32221 0245899999642 112345666554
Q ss_pred hcCcEee-----ee-cCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 397 KFGWIVP-----AY-TMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 397 ~~G~~v~-----~~-~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
--....+ +. +.|.. ....+.+|+||+- |+.+.|++||+++++.++..
T Consensus 328 l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~~~~~ 394 (405)
T PRK08776 328 YFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI----ESAEDLLIDLRAGLARAEAV 394 (405)
T ss_pred cceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhHHH
Confidence 3111000 00 00100 1124689999984 78888999999999876443
No 192
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.85 E-value=6.5e-19 Score=179.88 Aligned_cols=333 Identities=14% Similarity=0.043 Sum_probs=207.0
Q ss_pred CCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH
Q 010897 66 TWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (498)
Q Consensus 66 ~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~ 142 (498)
...+|++.+++.+++++...+...++ +......++.+.+|+++|.+. .++.++|..++..++.++.++
T Consensus 11 l~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~-------al~~~sG~~a~~~~i~~l~~~-- 81 (392)
T PLN03227 11 TSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES-------AILYSDGASTTSSTVAAFAKR-- 81 (392)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEecCcHHHHHHHHHHhCCC--
Confidence 34568888888888766322221111 122244566666999999864 666666667776666665332
Q ss_pred HHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh-----------hCCeEEEEeec
Q 010897 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-----------ENTICVAAILG 211 (498)
Q Consensus 143 ~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-----------~~t~~v~~~~~ 211 (498)
+++|++++..|.++...++..+++++.++..+- -|++.+.+.+. +++++|++..+
T Consensus 82 -----------GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~---~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v 147 (392)
T PLN03227 82 -----------GDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM---KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGL 147 (392)
T ss_pred -----------CCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH---HHHHHHHHHhhhhccccccccCCCcEEEEEcCC
Confidence 579999999999999988888888777765321 23444444443 25788888889
Q ss_pred cCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-c-cccC-CCCeeEEEEcCCccCCCCCCeEEE
Q 010897 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDFR-LPLVKSINVSGHKYGLVYAGVGWV 288 (498)
Q Consensus 212 ~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~-~~~~-~~~~dsi~~s~hK~l~~p~g~g~~ 288 (498)
.+++|.+.|+++|.++|+++ |+++++|++|+.+...-..... . +.+. ..++|.++.+.+|.++ +.| |++
T Consensus 148 ~~~~G~i~~l~~i~~l~~~~------g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g-g~v 219 (392)
T PLN03227 148 YKNTGTLAPLKELVALKEEF------HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG-GMT 219 (392)
T ss_pred cCCCCcccCHHHHHHHHHHc------CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC-cEE
Confidence 99999999999999999999 9999999999733211000000 0 0111 2357999999999754 332 444
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE---
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE--- 365 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~--- 365 (498)
+.+ ++.. +.+. .+ ....++.++-++....+..+++..... ..++.++..+++++|.+.|++.+ +.
T Consensus 220 ~~~-~~~~-~~~~---~~----~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~-~~~~~ 287 (392)
T PLN03227 220 VGS-EEVV-DHQR---LS----GSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSS-HPYAL 287 (392)
T ss_pred ecC-HHHH-HHHH---Hh----CcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-Ccccc
Confidence 433 2211 1110 00 011111122222223333333332211 24677888899999999998632 22
Q ss_pred -------EeeCCCCccEEEEEecCCCC-------CCHHHHHHHHHhcCcEeeeec------CCCCCCCeeEEEEeecCCC
Q 010897 366 -------ILSKDVGVPLVAFSLKDSSA-------HTVFEISEGLRKFGWIVPAYT------MPANAENVAVLRVVVREDF 425 (498)
Q Consensus 366 -------~~~~~~~~~~v~f~~~~~~~-------~~~~~l~~~L~~~G~~v~~~~------~~~~~~~~~~lRv~v~~~~ 425 (498)
+...+ ..+++.+.+.+... ....+++++|.++|+.+.... .+. .....+|++++..+
T Consensus 288 ~~rg~~~~~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~--~P~~~iR~~~~~~~ 364 (392)
T PLN03227 288 KLRNRLVITSDP-ISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQL--VPPPCLRVVANASH 364 (392)
T ss_pred ccccccccCCCC-CCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCC--CCCceEEEEecCCC
Confidence 11222 46788888743110 012488899999999874311 111 12366999999999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 010897 426 SRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 426 t~~~~~~l~~~l~~~l~~l 444 (498)
|.++++++++.|+++++.+
T Consensus 365 t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 365 TREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999775
No 193
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.85 E-value=3.6e-19 Score=178.57 Aligned_cols=277 Identities=13% Similarity=0.045 Sum_probs=188.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCe
Q 010897 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (498)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~ 177 (498)
.++++++++.+|++.++ .+++|+|+++++.+... +.+ ...|++++++|..+..+++..|++
T Consensus 56 ~~L~~~ia~~~~~~~~~----~I~i~~Gs~e~i~~l~~-~~~--------------~g~v~v~~P~y~~y~~~~~~~g~~ 116 (339)
T PRK06959 56 DGLAACAARYYGAPDAA----HVLPVAGSQAAIRALPA-LLP--------------RGRVGIAPLAYSEYAPAFARHGHR 116 (339)
T ss_pred HHHHHHHHHHhCCCCcc----cEEECcCHHHHHHHHHH-hcC--------------CCeEEEcCCCcHHHHHHHHHCCCE
Confidence 36777899999997421 38999999999864432 211 124888999999999999999999
Q ss_pred eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHH---HHhhcccCCCceEEEecCcccccccc
Q 010897 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL---TKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 178 ~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la---~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
++.+++++ +. +.+.++.+++++||||||.+.+.+++.+++ +++ ++++++|++|..+..
T Consensus 117 ~~~v~~~~-------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~------~~~vI~DEay~~~~~-- 177 (339)
T PRK06959 117 VVPLDEAA-------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR------GGTLIVDEAFADTLP-- 177 (339)
T ss_pred EEeecccc-------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccCCC--
Confidence 98887643 11 223456899999999999998887777664 466 899999999998752
Q ss_pred cCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
.+........+++ .+.-+..|.+ +++.++||++.. ++.+ +.+. .....+. ...++|.++..
T Consensus 178 -~~s~~~~~~~~~v-i~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~-------~~~~~~~-------vs~~~q~a~~~ 239 (339)
T PRK06959 178 -AASLAAHTDRPGL-VVLRSVGKFFGLAGVRAGFVLAA-PALL-AALR-------DALGAWT-------VSGPARHAVRA 239 (339)
T ss_pred -cccchhccCCCCE-EEEecChhhcCCcchheEEEecC-HHHH-HHHH-------HhcCCCC-------CcHHHHHHHHH
Confidence 1111111123454 4555777755 588999999853 2222 1111 0011111 12345666666
Q ss_pred HhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCC
Q 010897 334 RLGFEGY-KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAE 412 (498)
Q Consensus 334 ~lg~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~ 412 (498)
.+....| ++..+...+.++++.+.|++++ +++. + ..+++.++++ +..++.+.|.++|+.++.+.
T Consensus 240 ~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~--~-~~~f~~~~~~-----~~~~l~~~l~~~GI~vr~~~------ 304 (339)
T PRK06959 240 AFADAAWQAAMRERLAADGARLAALLRAHG-FAVH--A-TPLFSWTDDP-----RAAALHAALARRGIWTRYFA------ 304 (339)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcc--C-cceEEEEeCC-----CHHHHHHHHHhCCeEEEECC------
Confidence 6654444 4556677778899999999985 7655 2 3445555542 45689999999999987531
Q ss_pred CeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 413 NVAVLRVVVREDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 413 ~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
...++||+++. +.+++++|++.|+++++.++..
T Consensus 305 ~~~~lRisi~~--~~~e~~~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 305 PPPSVRFGLPA--DEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred CCCeEEEECCC--CHHHHHHHHHHHHHHHHHHhhc
Confidence 12479999842 6789999999999999887643
No 194
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.85 E-value=1e-18 Score=176.80 Aligned_cols=336 Identities=13% Similarity=0.048 Sum_probs=208.7
Q ss_pred CHHHHHHHHHHhhhccCCCCCcccccccCCC-hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCC-CCCC
Q 010897 38 PKEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADD 115 (498)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~ 115 (498)
++..+.+...+.-. .+.+.+++....|..+ ++.+.+++.+.... ..|....+..++++++.+++.+.+|.+ .+.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~- 80 (357)
T TIGR03539 5 PWDSLAPYKAKAAS-HPDGIVDLSVGTPVDPVPPLIRAALAAAADA--PGYPQTWGTPELREAIVDWLERRRGVPGLDP- 80 (357)
T ss_pred hHHHHHHHHHHhhh-CCCCeEEccCCCCCCCCCHHHHHHHHHHHhh--CCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-
Confidence 44555555554432 2333355565544333 56677777665432 234444567889999999998887765 432
Q ss_pred CCcceeeecChhHHHHHHHHHH-HHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHH
Q 010897 116 KTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVK 194 (498)
Q Consensus 116 ~~~~~~~t~g~sea~~la~~a~-~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~ 194 (498)
..+++|+|+++++.+++.++ .++ +++|++++++|..+...++.+|++++.++ |++.
T Consensus 81 --~~I~it~G~~~~i~~~~~~l~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~ 137 (357)
T TIGR03539 81 --TAVLPVIGTKELVAWLPTLLGLGP-------------GDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTE 137 (357)
T ss_pred --CeEEEccChHHHHHHHHHHHcCCC-------------CCEEEECCCCcHHHHHHHHhcCCEEeccC--------Chhh
Confidence 23899999999988776654 221 47899999999999999999999887764 1222
Q ss_pred HHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-ccc-----CC
Q 010897 195 AVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-----RL 265 (498)
Q Consensus 195 L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~-----~~ 265 (498)
+. .+++++|++++++||||...+ +++|.++|+++ |+++++|++|+.+.. ..+... .+. ..
T Consensus 138 l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~ 206 (357)
T TIGR03539 138 LD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARER------GAVVASDECYLELGW--EGRPVSILDPRVCGGDH 206 (357)
T ss_pred cC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc------CeEEEEecchhhhcc--CCCCccceecccCCCcc
Confidence 22 247899999999999999865 66788899999 999999999987541 111100 000 01
Q ss_pred CCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHH
Q 010897 266 PLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNI 343 (498)
Q Consensus 266 ~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~ 343 (498)
++ .++..|..|.+ +++.++||++. +++.. ..+.....+ .. .+ ...+.|.++...+.. ...++.
T Consensus 207 ~~-vi~~~S~SK~~~~~G~R~G~~i~-~~~~~-~~~~~~~~~-~~--------~~---~~~~~q~~~~~~l~~~~~~~~~ 271 (357)
T TIGR03539 207 TG-LLAVHSLSKRSNLAGYRAGFVAG-DPALV-AELLTVRKH-AG--------LM---VPAPVQAAMVAALGDDGHVAEQ 271 (357)
T ss_pred cc-EEEEeccccccCCCceeEEEEec-CHHHH-HHHHHHHhh-cc--------cC---CCHHHHHHHHHHcCCHHHHHHH
Confidence 12 35566888864 67788999973 33222 111100000 00 11 122344444444533 334556
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC
Q 010897 344 MENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE 423 (498)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~ 423 (498)
.++..++++++.+.|++.+ +.+..+ ..+++.|.-.+ .+..++.+.|.++|+.+...... ...+..++|+++..
T Consensus 272 ~~~~~~~~~~~~~~L~~~g-~~~~~p--~~~~~~~~~~~---~~~~~~~~~l~~~gV~v~pg~~f-~~~~~~~iRis~~~ 344 (357)
T TIGR03539 272 KARYAARRAQLKPALEKAG-FRIDHS--EAGLYLWATRG---EDAWDTVDRLAELGILVAPGDFY-GPAGSQHVRVALTA 344 (357)
T ss_pred HHHHHHHHHHHHHHHHHcC-CCCcCC--CccEEEEEECC---CCHHHHHHHHHhCCEEECCcccc-CCCCCCeEEEEecC
Confidence 6666778888999998875 765543 35655553322 25668999999999987543321 12235689999974
Q ss_pred CCCHHHHHHHHH
Q 010897 424 DFSRSLVERLIS 435 (498)
Q Consensus 424 ~~t~~~~~~l~~ 435 (498)
+.+++++.++
T Consensus 345 --~~~~i~~~~~ 354 (357)
T TIGR03539 345 --TDERIAAAVA 354 (357)
T ss_pred --CHHHHHHHHH
Confidence 4555554443
No 195
>PLN02368 alanine transaminase
Probab=99.85 E-value=3.5e-19 Score=182.04 Aligned_cols=271 Identities=11% Similarity=0.044 Sum_probs=183.2
Q ss_pred ChHHHHHHHHHHh-c-cCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH-HHHHHH
Q 010897 68 MEPECDKLVMASI-N-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQK 144 (498)
Q Consensus 68 ~~~~~~~~l~~~~-~-~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~-~~~~~~ 144 (498)
+++.+.+++.... . .....|....+..++++.+.+++.+..|++.+. ..+++|+|+++++.+++.++. ++
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~p---- 154 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP---ELIFLTDGASKGVMQILNAVIRGE---- 154 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcccHHHHHHHHHHHHcCCC----
Confidence 4445555554422 1 123345555577889999999998888876432 239999999999998888774 22
Q ss_pred HHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhh------CCeEEEEeeccCCccc
Q 010897 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (498)
Q Consensus 145 ~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~ 217 (498)
+++|++++++|..+...++..|++++.+++++ ++|.+|++.|++.+++ +|++|++++|+||||.
T Consensus 155 ---------Gd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~ 225 (407)
T PLN02368 155 ---------KDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQ 225 (407)
T ss_pred ---------CCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCc
Confidence 47899999999999999999999999999874 4588999999999974 6889999999999999
Q ss_pred ccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCC-CC-c-c----ccC--CC-C-eeEEEEcCCccC--CC
Q 010897 218 FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DL-E-W----DFR--LP-L-VKSINVSGHKYG--LV 281 (498)
Q Consensus 218 ~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~-~~-~-~----~~~--~~-~-~dsi~~s~hK~l--~~ 281 (498)
+.+ +++|.++|+++ +++|++|++|+.+.. ... .. . . ++. .. . -.++..+..|.+ ++
T Consensus 226 v~s~e~l~~l~~~a~~~------~~~II~DE~Y~~l~y--~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~ 297 (407)
T PLN02368 226 CLSEANLREILKFCYQE------RLVLLGDEVYQQNIY--QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGEC 297 (407)
T ss_pred cCCHHHHHHHHHHHHHc------CCEEEEEcccccccc--CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCC
Confidence 955 55677788999 999999999998752 110 11 0 0 010 01 1 223344677764 58
Q ss_pred CCCeEEEEEe--CCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH--------HHH----HHHHHHH
Q 010897 282 YAGVGWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF--------EGY----KNIMENC 347 (498)
Q Consensus 282 p~g~g~~~~~--~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~--------~g~----~~~~~~~ 347 (498)
+.++||+++. +++.+ +.+.. .. ... .+ ...++|+++...+.. +.+ +++.+..
T Consensus 298 GlRiGy~i~~~~~~~li-~~~~~----~~----~~~--~~---~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (407)
T PLN02368 298 GQRGGYFEMTNIPPKTV-EEIYK----VA----SIA--LS---PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESL 363 (407)
T ss_pred ccceEEEEEeCCCHHHH-HHHHH----Hh----ccc--CC---CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999862 22221 11110 00 000 11 233456666655531 112 3456777
Q ss_pred HHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 348 MGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 348 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
.++++.+.+.|++++++.+..+ ...+.+|
T Consensus 364 ~~rr~~~~~~L~~~~g~~~~~P--~Gafy~~ 392 (407)
T PLN02368 364 RRRARMMTDGFNSCKNVVCNFT--EGAMYSF 392 (407)
T ss_pred HHHHHHHHHHHhCCCCeEeCCC--CeeeEec
Confidence 7889999999999988876543 4566665
No 196
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=1.3e-19 Score=185.64 Aligned_cols=292 Identities=14% Similarity=0.058 Sum_probs=197.0
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~ 169 (498)
.|...++| +.+++++|.+. ..+++||++|+.+++.++.++ +++|+++.+.|..+..
T Consensus 75 ~Pt~~~LE----~~lA~l~g~~~-------~l~~~sG~~Ai~~al~al~~~-------------GD~Vl~~~~~Y~~~~~ 130 (418)
T PLN02242 75 NPTVLNLG----RQMAALEGTEA-------AYCTASGMSAISSVLLQLCSS-------------GGHVVASNTLYGGTHA 130 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHH
Confidence 34444554 45999999875 778999999999988887543 4789999998887766
Q ss_pred HH-----HHcCCeeEEEEecCCccccCHHHHHHHhhhC-CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 170 FA-----RYFEVELKEVKLEEGYYVMNPVKAVELVDEN-TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 170 ~~-----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~-t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
.+ +..|++++.++. .|+++++++++++ |++|++++++||||.+.|+++|.++|+++ +++++|
T Consensus 131 ~~~~~~~~~~G~~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------gi~liv 198 (418)
T PLN02242 131 LLAHFLPRKCNITTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEK------GVTVVV 198 (418)
T ss_pred HHHHhhhhccCceEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHh------CCEEEE
Confidence 54 346777766653 3799999999884 99999999999999999999999999999 999999
Q ss_pred ecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCc
Q 010897 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~ 321 (498)
|++|+.+. ..+ . . .++|++..|.+|++.++.. .|+++ .+++.+ ..+.. +... .....|.
T Consensus 199 Dea~~~~~---~~~-~--~---~g~divv~S~SK~l~g~g~~~gG~iv-~~~~li-~~l~~---~~~~---~~~~~g~-- 259 (418)
T PLN02242 199 DNTFAPMV---LSP-A--R---LGADVVVHSISKFISGGADIIAGAVC-GPAELV-NSMMD---LHHG---ALMLLGP-- 259 (418)
T ss_pred ECCCCccC---CCH-H--H---cCCcEEEEeCccccCCCCCceEEEEE-cCHHHH-HHHHH---Hhhh---hhhccCC--
Confidence 99997543 111 1 1 1478999999999876644 46666 333322 11110 0000 0000011
Q ss_pred hHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC------------------CCccEEEEEecCC
Q 010897 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD------------------VGVPLVAFSLKDS 383 (498)
Q Consensus 322 ~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------------~~~~~v~f~~~~~ 383 (498)
....+.+.+..++...+..++++..++++++.+.|++++ ++++.+. ...++++|.+.+
T Consensus 260 --~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~- 335 (418)
T PLN02242 260 --TMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT- 335 (418)
T ss_pred --CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC-
Confidence 222344445555656777888999999999999999996 7776432 124688999843
Q ss_pred CCCCHHHHHHHHHhc------CcEeee----ecCCCC--------------CCCeeEEEEeecCCCCHHH-HHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKF------GWIVPA----YTMPAN--------------AENVAVLRVVVREDFSRSL-VERLISHIE 438 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~------G~~v~~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~-~~~l~~~l~ 438 (498)
.....++.+.|.-- +..+-. .+.|.. .-..+.+|+|++. |+ .|.|++||+
T Consensus 336 -~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~ 410 (418)
T PLN02242 336 -EERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFE 410 (418)
T ss_pred -HHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHH
Confidence 22345777777521 111100 000100 1123689999984 64 888999999
Q ss_pred HHHHHHH
Q 010897 439 EVLKEIE 445 (498)
Q Consensus 439 ~~l~~l~ 445 (498)
++++.++
T Consensus 411 ~al~~~~ 417 (418)
T PLN02242 411 KALSAMK 417 (418)
T ss_pred HHHHHhh
Confidence 9998764
No 197
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.85 E-value=9.2e-19 Score=182.15 Aligned_cols=351 Identities=14% Similarity=0.068 Sum_probs=199.2
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHH-HHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI-AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~l-a~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
++.+.++.. ++..+ .|...++..++.+++.+++ .+.++......+...+++|+|+++|+.+++.++....
T Consensus 115 ~~~v~e~~~-~~~~~--~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~------ 185 (527)
T PRK09275 115 DEFVYELVD-GIIGD--NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENG------ 185 (527)
T ss_pred CHHHHHHHH-HHhcC--CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhh------
Confidence 455666444 44322 3555667788888887744 4433322111001248999999999998887643210
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe--c-CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccC---H
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--E-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---V 221 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~--~-~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l 221 (498)
.-..+++|++++|+|..|...+++.|.+++.|++ + +++|++|+++|++++++++++|++++|+||||.+.+ +
T Consensus 186 --ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l 263 (527)
T PRK09275 186 --LLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESL 263 (527)
T ss_pred --cCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHH
Confidence 0112579999999999999999998766655555 3 345899999999999999999999999999999976 6
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCc-cCCCCCCeEEEEEeCCCCC---C
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDL---P 297 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK-~l~~p~g~g~~~~~~~~~l---~ 297 (498)
++|+++|++++. +++|++|++|+.+...+. .. ....-+++.. ..|..| |+++++++||++..+...+ .
T Consensus 264 ~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~--s~-~~~~~~~~I~-v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i 335 (527)
T PRK09275 264 EKIADIVNEKRP----DLMIITDDVYGTFVDDFR--SL-FAVLPYNTIL-VYSFSKYFGATGWRLGVIALHEDNVFDKLI 335 (527)
T ss_pred HHHHHHHHhcCC----CcEEEECCCChhhccccc--CH-HHhCCCCEEE-EeehhhhccCcHhHHhhhhcCchhHHHHHH
Confidence 677888864311 899999999998752211 00 0011123443 345555 4578999999986543111 0
Q ss_pred ccc---------------ccccC---ccCC---CCCCcc---ccCCCchHHHH-HHHHHHHHh--cHHHHHHHHHHHHHH
Q 010897 298 DEL---------------VFHIN---YLGS---DQPTFT---LNFSKGSSQII-AQYYQFIRL--GFEGYKNIMENCMGN 350 (498)
Q Consensus 298 ~~~---------------~~~~~---yl~~---~~~~~~---l~~sr~~~~~~-a~~~~l~~l--g~~g~~~~~~~~~~~ 350 (498)
..+ ..++. ++.. +..... ..+.....+.. ++......+ +.+..++..+.+.+.
T Consensus 336 ~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~R 415 (527)
T PRK09275 336 AKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRR 415 (527)
T ss_pred HhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 000 00000 0000 000000 00111111221 211122222 233345666677777
Q ss_pred HHHHHHHHhcCCCeEEeeCCCCccEEEE-EecCC--------------CCCCHHHHHHHHHhc-CcEeeeecCCCCCCCe
Q 010897 351 ARALREGLEKTGRFEILSKDVGVPLVAF-SLKDS--------------SAHTVFEISEGLRKF-GWIVPAYTMPANAENV 414 (498)
Q Consensus 351 a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~--------------~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~ 414 (498)
++.+.+.| + +.+...++...+.+| ++... +..+..+++.+|.++ |+.+.....-. ...
T Consensus 416 r~~l~~~L---g-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg--~~~ 489 (527)
T PRK09275 416 YKALYEGL---G-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFG--GPE 489 (527)
T ss_pred HHHHHHHc---C-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhC--CCC
Confidence 77787777 2 322211223444444 44321 123567888888765 66543222111 124
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 415 AVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 415 ~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
.++|+|+. ..+.++..+..+.|++++++..
T Consensus 490 ~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 490 WSVRVSLA-NLNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred CeEEEEEe-cCCHHHHHHHHHHHHHHHHHHH
Confidence 57999985 2355666666666666665543
No 198
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.85 E-value=2.1e-18 Score=189.72 Aligned_cols=348 Identities=13% Similarity=0.076 Sum_probs=229.7
Q ss_pred CCCCHHHHHHHHHHhhhccCCCCCccc--ccccCCChHHHHHHHHHHhc---c-CCCCCcCCcchHHHHHHHHHHHHHHc
Q 010897 35 NSMPKEAAYQVINDELMLDGNPRLNLA--SFVTTWMEPECDKLVMASIN---K-NYVDMDEYPVTTELQNRCVNMIAHLF 108 (498)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~l~~~~~---~-n~~~~~~~~~~~~le~~~~~~la~l~ 108 (498)
.+.+..++++.++++...+.. .+|+. ++.++..++.+.+.+.+... . .++.++.+++..+.-.+.+.++++|+
T Consensus 83 ~~~sE~e~~~~~~~la~kN~~-~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt 161 (993)
T PLN02414 83 EGLTESQMLEHMKSLASKNKV-FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT 161 (993)
T ss_pred CCCCHHHHHHHHHHHHhcCCc-cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 478899999999887544321 22323 33344455666566654332 1 23344445677777788999999999
Q ss_pred CCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHcCCeeEEEEec
Q 010897 109 NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLE 184 (498)
Q Consensus 109 g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~g~~~~~v~~~ 184 (498)
|++.. ...++.++|.+...++++.+-. .| ++++|++++..|++.. ..++..|++++.++++
T Consensus 162 G~~~a-----naSL~d~aTAaaea~~~a~~~~-------~g---~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~ 226 (993)
T PLN02414 162 GLPMS-----NASLLDEGTAAAEAMAMCNNIL-------KG---KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEK 226 (993)
T ss_pred CCChh-----hEeecCChHHHHHHHHHHHhcc-------cC---CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecch
Confidence 99874 3788888888776555544211 11 2468999999999765 4455679999999875
Q ss_pred CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC
Q 010897 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR 264 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~ 264 (498)
+. | ...+.+..++ ++-.+.+|.+.|+++|.++||++ |++++| +|+.-...++.. .+
T Consensus 227 ~~----~------~~~~~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~------GaL~iV-aad~lal~~l~~------pg 282 (993)
T PLN02414 227 DF----D------YSSGDVCGVL-VQYPATDGEVLDYAEFVKNAHAN------GVKVVM-ATDLLALTMLKP------PG 282 (993)
T ss_pred hh----c------cccCceEEEE-EecCCCCeEEcCHHHHHHHHHHc------CCEEEE-EECHHHhcCCCC------Hh
Confidence 31 1 1122344444 44556689999999999999999 999999 766544322211 12
Q ss_pred CCCeeEEEEcCCccCCCCCC-----eEEEEEeCCCCCCcccc-cccCccCC--CCCCcc--c----------cCCCchHH
Q 010897 265 LPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELV-FHINYLGS--DQPTFT--L----------NFSKGSSQ 324 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p~g-----~g~~~~~~~~~l~~~~~-~~~~yl~~--~~~~~~--l----------~~sr~~~~ 324 (498)
.-++|+++.++|||+ +|.| .|+++++++- . +..+ .-..+-.. ....+. + .++.+...
T Consensus 283 e~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~-~-r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict 359 (993)
T PLN02414 283 EWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY-K-RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICT 359 (993)
T ss_pred hccCcEEEECCCccc-cCCCCCCCCeeEEEECHHH-H-hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhH
Confidence 236999999999998 4444 8999998742 1 2111 01111000 000000 0 12332222
Q ss_pred HHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcC
Q 010897 325 IIAQYYQF-----IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFG 399 (498)
Q Consensus 325 ~~a~~~~l-----~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G 399 (498)
..++++++ ..+|..|.+++.+++.+++.++++.|++.+ +++..++ .++++.|+++ +..++.++|.++|
T Consensus 360 ~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~-~f~~vt~~~~-----~~~~v~~~L~~~g 432 (993)
T PLN02414 360 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLP-FFDTVKVKCS-----DADAIADAAAKVG 432 (993)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCC-CcCeEEEecC-----CHHHHHHHHHHCC
Confidence 23333333 456889999999999999999999998866 8887664 6788999873 3468999999999
Q ss_pred cEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHH
Q 010897 400 WIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEE 439 (498)
Q Consensus 400 ~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~ 439 (498)
+.++... ...+|+|+++.+|.+|+|+|++.|..
T Consensus 433 I~l~~~~-------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 433 INLRVVD-------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CeeEEec-------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 9775432 23499999999999999999998863
No 199
>PRK07505 hypothetical protein; Provisional
Probab=99.85 E-value=1.1e-18 Score=179.35 Aligned_cols=346 Identities=16% Similarity=0.123 Sum_probs=207.0
Q ss_pred cCCCCCcccccccC--CChHHHHHHHHHHhccCC-CCCcCC--cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFVTT--WMEPECDKLVMASINKNY-VDMDEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~~~--~~~~~~~~~l~~~~~~n~-~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+++.+.... ..+|++.+++.+.++.-. ..+..+ ....+...++.+.|++++|. . .+++++|+
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-------~~~~~sG~ 115 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S-------VLTFTSCS 115 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C-------EEEECChH
Confidence 46666666553222 447889999988886522 111111 12355667888889999986 3 66666778
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH--HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeE
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF--ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTIC 205 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~ 205 (498)
+|+..++..+...+. ..| ++..|+.....|.++... ....+.+++.+|. .|+++|++++++++++
T Consensus 116 ~a~~~ai~~~~~~~~----~~~---~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~------~d~~~l~~~~~~~~~~ 182 (402)
T PRK07505 116 AAHLGILPLLASGHL----TGG---VPPHMVFDKNAHASLNILKGICADETEVETIDH------NDLDALEDICKTNKTV 182 (402)
T ss_pred HHHHHHHHHHHhccc----CCC---CCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC------CCHHHHHHHHhcCCCE
Confidence 899877765533110 001 122445566888886432 2223556666653 4789999999878889
Q ss_pred EEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccc-ccccCCCCccccC--CCCeeEEEEcCCccCCCC
Q 010897 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI-APFLYPDLEWDFR--LPLVKSINVSGHKYGLVY 282 (498)
Q Consensus 206 v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~-~~~~~~~~~~~~~--~~~~dsi~~s~hK~l~~p 282 (498)
++++.|+|++|.+.|+++|.++|+++ ++++++|++|+... .++........+. .+....+..+..|.+..+
T Consensus 183 ~vl~~p~~~~G~~~~~~~i~~l~~~~------~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 183 AYVADGVYSMGGIAPVKELLRLQEKY------GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS 256 (402)
T ss_pred EEEEecccccCCcCCHHHHHHHHHHc------CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence 99999999999999999999999999 99999999985321 1111100000112 233455566778876543
Q ss_pred CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (498)
Q Consensus 283 ~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (498)
| |++++.+++.. +.+. .....++..++.+.....+..+++..+..+.+.+..+...++.+.+.+.+...
T Consensus 257 -G-g~~~~~~~~~~-~~~~-------~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 325 (402)
T PRK07505 257 -G-GVIMLGDAEQI-ELIL-------RYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE- 325 (402)
T ss_pred -C-eEEEeCCHHHH-HHHH-------HhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 3 66654443222 1111 11112222234433455555566655555555555555544444443322111
Q ss_pred CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 363 RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.......+..+.+.+ ..+..++.++|.++|+++.....|....+..++|+++...+|+++++++++.|+++++
T Consensus 326 -----~~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 326 -----QSGSFLPIRLIYIGD--EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred -----CCCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 011133443333321 1235689999999999987654443323446899999988999999999999998875
Q ss_pred H
Q 010897 443 E 443 (498)
Q Consensus 443 ~ 443 (498)
+
T Consensus 399 ~ 399 (402)
T PRK07505 399 E 399 (402)
T ss_pred h
Confidence 3
No 200
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-18 Score=191.97 Aligned_cols=349 Identities=13% Similarity=0.062 Sum_probs=227.6
Q ss_pred CCCHHHHHHHHHHhhhccCC-CCCcccccccCCChHHHHHHHHHH---hcc-CCCCCcCCcchHHHHHHHHHHHHHHcCC
Q 010897 36 SMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIAHLFNT 110 (498)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~l~~~---~~~-n~~~~~~~~~~~~le~~~~~~la~l~g~ 110 (498)
+.+..++++.++++...+.. ..|--.+|.+++.|+.+.+-+.+. +.. .++.++.+++..+.-.+.++++++|+|+
T Consensus 57 ~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~ 136 (954)
T PRK05367 57 ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGL 136 (954)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCC
Confidence 67899999999887654322 223334455555555553433321 111 2344455667778888999999999999
Q ss_pred CCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH----HHHHcCCeeEEEEecCC
Q 010897 111 PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYFEVELKEVKLEEG 186 (498)
Q Consensus 111 ~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~----~~~~~g~~~~~v~~~~~ 186 (498)
+.. ...+..++|.+.-..+.+.+ +. .++ +++|++++..|++... .++..|++++.++.+++
T Consensus 137 ~~a-----naSl~d~aTAa~ea~~~a~~--~~-----~~~---~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d 201 (954)
T PRK05367 137 EIA-----NASLLDEATAAAEAMALAKR--VS-----KSK---SNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA 201 (954)
T ss_pred Chh-----hccccccHHHHHHHHHHhhh--hc-----cCC---CCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC
Confidence 863 26677777777654444332 11 111 3689999999997664 45678999999997542
Q ss_pred ccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCC
Q 010897 187 YYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (498)
Q Consensus 187 ~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~ 266 (498)
++ ++++.++++.. .+.+|.+.|+++|+++||++ |++++||+.+....+ ..+ .+.-
T Consensus 202 ---~~--------~~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~------Gal~~vda~~~Al~~--l~~-----pge~ 256 (954)
T PRK05367 202 ---LD--------HDDVFGVLLQY-PGTSGEVRDYTALIAAAHAR------GALVAVAADLLALTL--LTP-----PGEM 256 (954)
T ss_pred ---CC--------cccEEEEEEec-CCCCeeeccHHHHHHHHHHc------CCEEEEEehhhhccC--CCC-----hhhc
Confidence 22 23455555555 46789999999999999999 999999996632221 111 1223
Q ss_pred CeeEEEEcCCccC----CCCCCeEEEEEeCCC--CCCcc-ccccc------CccCCCCC-----CccccCCCchH---HH
Q 010897 267 LVKSINVSGHKYG----LVYAGVGWVVWRTKD--DLPDE-LVFHI------NYLGSDQP-----TFTLNFSKGSS---QI 325 (498)
Q Consensus 267 ~~dsi~~s~hK~l----~~p~g~g~~~~~~~~--~l~~~-~~~~~------~yl~~~~~-----~~~l~~sr~~~---~~ 325 (498)
++|++..++|||+ +++++.|++++|+.- .++.. ..... .|....+. .+. .++.+.. .+
T Consensus 257 GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre-kaTsNict~qaL 335 (954)
T PRK05367 257 GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE-KATSNICTAQVL 335 (954)
T ss_pred CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccc-ccccccchHHHH
Confidence 6999999999994 333469999998641 12111 11000 01100000 000 0111111 11
Q ss_pred HHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEee
Q 010897 326 IAQY--YQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVP 403 (498)
Q Consensus 326 ~a~~--~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~ 403 (498)
++.. ..+..+|.+|++++.++...++.++++.|++. ++++..+. .+..+.|+++ .+..++.++|.++|+.++
T Consensus 336 ~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~-~f~~~~~~~~----~~~~~i~~~l~~~gi~~~ 409 (954)
T PRK05367 336 LAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDS-FFDTLTVEVG----GDAAAVLARALAAGINLR 409 (954)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCC-CCCeEEEeCC----CCHHHHHHHHHHCCceec
Confidence 2222 23467899999999999999999999999885 48877554 5678888762 267899999999998863
Q ss_pred eecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 404 AYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 404 ~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
.. ....+|+++++.+|.+++++|++.|.
T Consensus 410 ~~-------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 410 RV-------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred cc-------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 32 13459999999999999999999987
No 201
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=7.7e-19 Score=178.47 Aligned_cols=287 Identities=18% Similarity=0.099 Sum_probs=194.1
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH-HHHH---HHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKF---ARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~-~~~~---~~~~ 174 (498)
.+.+++|++.|.+. +++++||++|+.+++.++.++ +++|+++++.|.. +..+ +...
T Consensus 56 ~L~~~lA~l~g~~~-------~i~~~sg~~Ai~~~l~~l~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 56 VVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 44555899888542 899999999998888776442 4789999998884 3322 2333
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|+++..++ ..|+++++++++++|++|++++|+||||.+.|+++|.++|+++ +++++||++|+.+..
T Consensus 116 gi~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~------g~~vivDeay~~~~~-- 181 (386)
T PRK08045 116 CYRVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREA------GAVSVVDNTFLSPAL-- 181 (386)
T ss_pred CeEEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 44555542 2689999999999999999999999999999999999999999 999999999987532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..| . + .++|.+..|.+||++++.+ .|+++.++++.. ..+.....+++.. ...+.+|..+
T Consensus 182 ~~p-l--~---~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~g~~------------~~p~~~~l~~ 242 (386)
T PRK08045 182 QNP-L--A---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNIGVT------------GGAFDSYLLL 242 (386)
T ss_pred CCc-h--h---hCCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhcCCC------------CCHHHHHHHH
Confidence 111 1 1 2579999999999988877 577766554322 2111111222211 2334556555
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
+.+ +.+..++++..+++..+.+.|++.|.+. |..+. ...++++|.+++. .....++.+.|.
T Consensus 243 rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~ 319 (386)
T PRK08045 243 RGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQTLRRFLGGLS 319 (386)
T ss_pred hhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc-HHHHHHHHHhcc
Confidence 544 4578899999999999999999999764 33221 0245899999631 112346666664
Q ss_pred hcCcEee-----eec-CCC--------------CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVP-----AYT-MPA--------------NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 397 ~~G~~v~-----~~~-~~~--------------~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
--....+ +.. .|. ..-..+.+|+||+- |+.+.|++||+++++...
T Consensus 320 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 320 LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRAAN 384 (386)
T ss_pred ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhh
Confidence 3221110 000 010 01124689999984 788889999999998654
No 202
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=5.3e-19 Score=180.20 Aligned_cols=287 Identities=16% Similarity=0.116 Sum_probs=189.2
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh----HHHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV----CWEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~----~~~~~~~~~ 174 (498)
++.+.+|+++|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|. .+...+..+
T Consensus 63 ~le~~lA~l~g~~~-------av~~~sG~~Ai~~~l~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 63 NLEGRIAFLEGTEA-------AVATSSGMGAIAATLLTILKA-------------GDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCcchHHHHHHHHHHhcC
Confidence 34445999999864 788888899998877776432 468999988664 455566778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++++ |+++++++++++|++|++++++||+|.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 123 G~~~~~vd~~------d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~------gi~livD~a~a~~~~-- 188 (391)
T TIGR01328 123 GIQVDFINMA------IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQ------GVKVIVDNTFATPML-- 188 (391)
T ss_pred CeEEEEECCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCchhcc--
Confidence 9888888753 78999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
.... . .++|++..|.+|++.++.+ .|.+++.+++.+............ +.. ......|.+++
T Consensus 189 -~~~~--~---~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~---------g~~--l~~~~a~l~l~ 251 (391)
T TIGR01328 189 -TNPV--A---LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT---------GSV--ISPFDAWLILR 251 (391)
T ss_pred -CCch--h---cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC---------CCC--CCcHHHHHHHh
Confidence 1111 1 2588999999999987654 233444554332111111111110 111 11222344443
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-eCC---------------CCccEEEEEecCCCCCCHHHHHHHHHh
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SKD---------------VGVPLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
+.+.+..++++..++++++.+.|++.|.++.+ .+. ...++++|.+++. .....++.+.|.-
T Consensus 252 --~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~~~~f~~~l~~ 328 (391)
T TIGR01328 252 --GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG-FAGAKKLLNNLKL 328 (391)
T ss_pred --CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC-HHHHHHHHHhCCc
Confidence 33455678899999999999999999876532 221 0245999999632 1223455555542
Q ss_pred c--CcEeee---e-cCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 398 F--GWIVPA---Y-TMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 398 ~--G~~v~~---~-~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
- +..+-. . +.|.. .-..+.+|+||+- |+.+.|++||+++++.
T Consensus 329 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 329 IRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred ceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 1 111000 0 00100 0124689999984 7888899999998864
No 203
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.85 E-value=6.4e-19 Score=182.46 Aligned_cols=313 Identities=12% Similarity=0.083 Sum_probs=202.7
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCC--CCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h 164 (498)
|..+.+...+++++.+++.+.+|. +.+. ..+++|+|+++|+.+.+.++.++ ++.|+++.|.|
T Consensus 91 y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p---~~Ivit~G~t~al~~l~~~l~~p-------------GD~Vlv~~P~Y 154 (447)
T PLN02607 91 FQDYHGLKSFRQAMASFMEQIRGGKARFDP---DRIVLTAGATAANELLTFILADP-------------GDALLVPTPYY 154 (447)
T ss_pred cCCCcchHHHHHHHHHHHHHhcCCCCCcCH---HHeEEcCChHHHHHHHHHHhCCC-------------CCEEEEcCCCC
Confidence 344557888999999999888773 2221 24889999999998877776442 46899999999
Q ss_pred hHHHHHHH-HcCCeeEEEEec-CCccccCHHHHHHHhhh------CCeEEEEeeccCCcccccC---HHHHHHHHHHhhc
Q 010897 165 VCWEKFAR-YFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (498)
Q Consensus 165 ~~~~~~~~-~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~ 233 (498)
..+...++ ..|++++.|+++ +++|.+|++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 155 ~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~-- 232 (447)
T PLN02607 155 PGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK-- 232 (447)
T ss_pred cchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC--
Confidence 99988776 479999999987 34578999999999875 6789999999999999966 67788889999
Q ss_pred ccCCCceEEEecCcccccccccCCCCc----c--cc---C-CCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccc
Q 010897 234 ETGWDTPIHVDAASGGFIAPFLYPDLE----W--DF---R-LPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVF 302 (498)
Q Consensus 234 ~~~~~~~l~vD~A~~g~~~~~~~~~~~----~--~~---~-~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~ 302 (498)
++++++|++|+.++. ..+... . .. . -+++.+ ..+..|-+ .++.++||++..++... ....
T Consensus 233 ----~i~lI~DEiYa~~~f--~~~~f~S~~s~~~~~~~~~~~~~v~v-i~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~- 303 (447)
T PLN02607 233 ----NIHLVSDEIYSGSVF--SASEFVSVAEIVEARGYKGVAERVHI-VYSLSKDLGLPGFRVGTIYSYNDKVV-TTAR- 303 (447)
T ss_pred ----CCEEEEecccccccc--CCCCcccHHHHHhhcCCCCCcCcEEE-EEcchhcCCCCcceEEEEEEcCHHHH-HHHH-
Confidence 999999999987642 111110 0 00 1 123444 45677754 58899999987443221 1110
Q ss_pred ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE
Q 010897 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-----YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (498)
Q Consensus 303 ~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-----~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (498)
... .+ +. ...+.|.+....+.+.. +.+..+++.+.++.+.+.|++.+ ++...+ ....++.
T Consensus 304 ---~~~----~~----~~--~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~g-i~~~~~-~ag~fvw 368 (447)
T PLN02607 304 ---RMS----SF----TL--VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAG-IECLKG-NAGLFCW 368 (447)
T ss_pred ---HHh----hc----CC--CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcccC-CeeEEEE
Confidence 000 01 00 11223444444454322 23445556667778888998875 665433 2455666
Q ss_pred EEecCC---CC-CCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 378 FSLKDS---SA-HTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 378 f~~~~~---~~-~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
++++.. .. ....++.++|.+ .|+.+...... .....+++|+++.. ...+.++..++.|.++++.
T Consensus 369 ~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f-~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 369 MNLSPLLETPTREGELALWDSILREVKLNISPGSSC-HCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred EEchHhhcCCCchhHHHHHHHHHHhCCEEEcCcccc-CCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 677421 01 123577777765 69876543211 12346789999964 2456676666666666643
No 204
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.85 E-value=1.3e-18 Score=178.89 Aligned_cols=333 Identities=13% Similarity=0.071 Sum_probs=205.5
Q ss_pred CcccccccC-CChHHHHHHHHHHhccC-----CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHH
Q 010897 58 LNLASFVTT-WMEPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (498)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~l~~~~~~n-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~ 131 (498)
+++....+. ++++.+.+++.+++... ...|...++...+++.+.+++.+. ++++ ..+++|+|+++++.
T Consensus 36 i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~-----d~I~it~Ga~~al~ 109 (402)
T TIGR03542 36 IRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDP-----EEIFISDGAKCDVF 109 (402)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCH-----HHEEECCCcHHHHH
Confidence 455555444 34567778777766542 123444457777777766654321 4443 23999999999987
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCC-----------eeEEEEecC-CccccCHHHHHHHh
Q 010897 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV-----------ELKEVKLEE-GYYVMNPVKAVELV 199 (498)
Q Consensus 132 la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~-----------~~~~v~~~~-~~~~~d~~~L~~~i 199 (498)
+. ..+.. .+++|++++++|..+...++..|+ +++.+++++ +++..|++.
T Consensus 110 ~l-~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 110 RL-QSLFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE----- 170 (402)
T ss_pred HH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----
Confidence 63 33222 146899999999999999999999 999999863 335555422
Q ss_pred hhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCC---eeEEE
Q 010897 200 DENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPL---VKSIN 272 (498)
Q Consensus 200 ~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~---~dsi~ 272 (498)
.+++++|++++|+||||.+.+ +++|.++|+++ +++|++|++|+.+.. .+.....+ .++. ..++.
T Consensus 171 ~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~y~~~~~---~~~~~~~~~~~~~~~~~vi~~ 241 (402)
T TIGR03542 171 EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH------GSLILFDAAYSAFIS---DPSLPHSIFEIPGAKECAIEF 241 (402)
T ss_pred cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEEchhhhhcc---CCCCCcchhhCCCCcccEEEE
Confidence 146899999999999999977 77888889999 999999999998752 11111111 1221 23445
Q ss_pred EcCCccC-CCCCCeEEEEEeCCCCCCccc-ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH---HHHHHHHHHH
Q 010897 273 VSGHKYG-LVYAGVGWVVWRTKDDLPDEL-VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EGYKNIMENC 347 (498)
Q Consensus 273 ~s~hK~l-~~p~g~g~~~~~~~~~l~~~~-~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~---~g~~~~~~~~ 347 (498)
.|..|.+ +++.++||++.... .+.... .....+....... +. ....+.|.++...+.. ..+++..+..
T Consensus 242 ~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~----~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 314 (402)
T TIGR03542 242 RSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWERRQCTK----FN--GASYPVQRAAEAAYAGEGLQPILEAISYY 314 (402)
T ss_pred ecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHHHhhhc----cc--CCCHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 6778866 68899999987432 110000 0000010000000 00 0223445555544432 2244555666
Q ss_pred HHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCC
Q 010897 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFS 426 (498)
Q Consensus 348 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t 426 (498)
.++++++.+.|++.+ +++..+. +.+++.+++++ .++..++.+.|. +.|+.+...... ...+..++|+++.. +
T Consensus 315 ~~~~~~~~~~L~~~~-~~~~~~~-~~~f~~v~l~~--~~~~~~l~~~l~~~~gv~v~pg~~f-~~~~~~~iRis~~~--~ 387 (402)
T TIGR03542 315 MENARILRKALEAAG-FKVYGGE-HAPYLWVKTPE--GISSWDFFDFLLYQYHVVGTPGSGF-GPSGEGFVRFSAFG--K 387 (402)
T ss_pred HHHHHHHHHHHHhcC-ceecCCC-ceeEEEEECCC--CCCHHHHHHHHHHhCCEEEeCchhh-CCCCCCEEEEEecC--C
Confidence 778888999998875 7765432 56788888853 467778999877 568877543211 12235789999743 4
Q ss_pred HHHHHHHHHHHH
Q 010897 427 RSLVERLISHIE 438 (498)
Q Consensus 427 ~~~~~~l~~~l~ 438 (498)
.+++++.++.|+
T Consensus 388 ~~~l~~~l~~l~ 399 (402)
T TIGR03542 388 RENIVEACERIK 399 (402)
T ss_pred HHHHHHHHHHHH
Confidence 565554444444
No 205
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.85 E-value=9.7e-19 Score=177.55 Aligned_cols=322 Identities=14% Similarity=0.042 Sum_probs=202.7
Q ss_pred CCCCcccccccCCC-hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCC-CCCCCCcceeeecChhHHHHH
Q 010897 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIML 132 (498)
Q Consensus 55 ~p~~~~~~~~~~~~-~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~sea~~l 132 (498)
++.+++....|..+ ++.+.+++.+..+.. .|....+..++++.+.+++.+..|.+ .+. ..+++|+|+++++.+
T Consensus 27 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~---~~I~it~G~~~~i~~ 101 (364)
T PRK07865 27 DGIVDLSVGTPVDPVPPVIQEALAAAADAP--GYPTTAGTPELREAIVGWLARRRGVTGLDP---AAVLPVIGSKELVAW 101 (364)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHhhC--CCCCccCCHHHHHHHHHHHHHHcCCCCCCc---ccEEEccChHHHHHH
Confidence 33345555444333 466777776654332 34444577789999999999888865 332 239999999999987
Q ss_pred HHHHH-HHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeec
Q 010897 133 AGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (498)
Q Consensus 133 a~~a~-~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~ 211 (498)
++.++ .++ ++.|++++++|..+..+++.+|+++..++. ++++. ..++++|+++++
T Consensus 102 ~~~~l~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------~~~l~---~~~~~~v~~~~p 157 (364)
T PRK07865 102 LPTLLGLGP-------------GDVVVIPELAYPTYEVGARLAGATVVRADS--------LTELG---PQRPALIWLNSP 157 (364)
T ss_pred HHHHHcCCC-------------CCEEEECCCCcccHHHHHHhcCCEEEecCC--------hhhCC---cccceEEEEcCC
Confidence 66555 221 468999999999999999999998887742 22222 256889999999
Q ss_pred cCCcccccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc---ccc-C-CCCeeEEEEcCCccC-CCC
Q 010897 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDF-R-LPLVKSINVSGHKYG-LVY 282 (498)
Q Consensus 212 ~t~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~---~~~-~-~~~~dsi~~s~hK~l-~~p 282 (498)
+||||.+.+ +++|.++|+++ ++++++|++|+.+.. ..+... ... . ...-.++..|..|.+ .++
T Consensus 158 ~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 229 (364)
T PRK07865 158 SNPTGRVLGVDHLRKVVAWARER------GAVVASDECYLELGW--DAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAG 229 (364)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhhhcc--CCCCCccccccccCCccceEEEEeechhccCCCc
Confidence 999998855 56788889999 999999999997642 111100 000 0 011245666788865 678
Q ss_pred CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcC
Q 010897 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 283 ~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
.++||++. +++.+ ..+.....+.. .+ ...+.|.++...+.. +..++..+...++++.+.+.|++.
T Consensus 230 lRiG~i~~-~~~~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 230 YRAGFVAG-DPALV-AELLEVRKHAG---------MM---VPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred eeeEEEec-CHHHH-HHHHHHHHhcC---------CC---cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88999874 33222 11111000000 01 122334444444443 334566667777888899999887
Q ss_pred CCeEEeeCCCCccEEEE-EecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 362 GRFEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 362 ~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+ +.+..+ ..+++.| .+. .+..++.+.|.++|+.+...... ......++|+++.. +++++++.++.|
T Consensus 296 g-~~~~~~--~~~~~~~~~~~----~~~~~~~~~l~~~gv~v~pg~~f-~~~~~~~iRi~~~~--~~~~~~~~~~~l 362 (364)
T PRK07865 296 G-FRVDHS--EAGLYLWATRG----EDCWDTVAWLAERGILVAPGDFY-GPAGAQHVRVALTA--TDERIAAAVERL 362 (364)
T ss_pred C-CcccCC--CccEEEEEeCC----CCHHHHHHHHHHCCEEEeCcccc-CcCCCCEEEEEecC--CHHHHHHHHHHh
Confidence 5 765543 3444433 331 24568889999999987543211 11235689999964 466666555544
No 206
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.5e-19 Score=166.77 Aligned_cols=320 Identities=18% Similarity=0.166 Sum_probs=221.3
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
-|..+..++|.++.-.... |++.|.+..||++ .|+++|-+. +.|+++||++|++++++-..+
T Consensus 33 ~PTdeMr~am~eA~vgDdV-yGeD~tt~rLE~~----vA~l~GKEA-------gLFv~SGTmgNllaIm~Hc~~------ 94 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVGDDV-YGEDPTTNRLEQR----VAELFGKEA-------GLFVPSGTMGNLLAIMVHCHQ------ 94 (384)
T ss_pred CChHHHHHHHhhcccCccc-ccCCccHHHHHHH----HHHHhCccc-------eeeecccccccHHHHHHHhcC------
Confidence 3456777777766544332 5677888888887 788888876 999999999999999887653
Q ss_pred hcCCCCCCcEEEEcCCchhHHHH---HHHHcCCeeEEEEecCCccccCHHHHHHHhhh--------CCeEEEEeeccCCc
Q 010897 147 EQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------NTICVAAILGSTLT 215 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~~~h~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~--------~t~~v~~~~~~t~t 215 (498)
.+-+|++.+.+|.-..+ .+.+.|+.++.|...+| +.||++++++++.. -|++|++-+-.+.+
T Consensus 95 ------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d-gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 95 ------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND-GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ------CCceEEeccchheeehhccChhhhccceeEeeeeCCC-CeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 13499999999984443 34556778888887665 78999999999973 26888887777777
Q ss_pred c-cccCHH---HHHHHHHHhhcccCCCceEEEecCcccccc-cccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEE
Q 010897 216 G-EFEDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (498)
Q Consensus 216 G-~~~~l~---~I~~la~~~~~~~~~~~~l~vD~A~~g~~~-~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~ 290 (498)
| .+.|++ +|.+||+++ |+.+|.|||--.-++ ....|- .--...+||+.+...|-+++|.|. +++
T Consensus 168 Gg~vlPle~~~~v~~lak~~------glkLH~DGARi~NAavasgV~v---k~i~~~fDSVsiCLSKglgAPVGS--ViV 236 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRH------GLKLHMDGARIFNAAVASGVPV---KKICSAFDSVSICLSKGLGAPVGS--VIV 236 (384)
T ss_pred CceEeeHHHHHHHHHHHhcc------CCeeecchhhhhhHHHHcCCCH---HHHHHhhhhhhhhhhccCCCCccc--EEE
Confidence 7 666665 577899999 999999997532211 001110 001234899999999999998765 455
Q ss_pred eCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC
Q 010897 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (498)
Q Consensus 291 ~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (498)
.+++.+.+.-.++.. +|+ |-|- ..++ ..++|-.+. +.+. .+++-++.++.|.+.+++.+++++-.+.
T Consensus 237 G~k~FI~kA~~~RKa-lGG--------GmRQ-sGvL-aaaaLval~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a 303 (384)
T KOG1368|consen 237 GSKDFIDKARHFRKA-LGG--------GMRQ-SGVL-AAAALVALD-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA 303 (384)
T ss_pred ccHHHHHHHHHHHHH-hcC--------chhH-HHHH-HHHHHHHhh-cchH-HHHHHHHHHHHHHHHhccccceeeecch
Confidence 555433222222222 222 2221 2333 223333333 2233 6777888999999999988888876554
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH-HHHHHH
Q 010897 371 VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI-EEVLKE 443 (498)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l-~~~l~~ 443 (498)
.+.|++...+. ...++..++++.|.+.|+.+.... ...+|++++...|.++++.++..+ +.++.+
T Consensus 304 ~etNiv~~~l~-q~~~~~~~l~~~~~k~gi~lm~~~-------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 304 VETNIVNMVLC-QARLTAEELCKFLEKNGILLMGGA-------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred hhcceeeeecc-cccCCHHHHHHHHHHCCeEEeecc-------ccceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 46788887774 346899999999999999865432 234899999999999999888888 444443
No 207
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=5.4e-19 Score=179.37 Aligned_cols=287 Identities=20% Similarity=0.160 Sum_probs=192.0
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH--
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-- 168 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~-- 168 (498)
|...++|+ .+++++|.+. .+++++|++|+.+++.++..+ +++|+++.+.|....
T Consensus 40 p~~~~le~----~la~l~g~~~-------a~~~~sG~~Ai~~~l~~l~~~-------------gd~Vl~~~~~y~~~~~~ 95 (369)
T cd00614 40 PTVDALEK----KLAALEGGEA-------ALAFSSGMAAISTVLLALLKA-------------GDHVVASDDLYGGTYRL 95 (369)
T ss_pred hhHHHHHH----HHHHHHCCCC-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEECCCCcchHHHH
Confidence 44455554 5888888754 788888999999888877432 468999998887644
Q ss_pred --HHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 169 --KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 169 --~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
..++..|++++.++.+ |+++++++++++|++|++..++||+|.+.|+++|.++|+++ |++++||++
T Consensus 96 ~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~------g~~livD~t 163 (369)
T cd00614 96 FERLLPKLGIEVTFVDPD------DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH------GALLVVDNT 163 (369)
T ss_pred HHHHHhhcCeEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 3456778888887642 58999999988999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
|+.+.. ..+ . . .++|++..|.+|++.++.. .|+++.++++.. +.+.....+++ .. ..
T Consensus 164 ~~~~~~--~~~-~--~---~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~g----------~~--~~ 222 (369)
T cd00614 164 FATPYL--QRP-L--E---LGADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLALG----------TI--LS 222 (369)
T ss_pred Ccchhc--CCh-h--h---hCCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhhC----------CC--CC
Confidence 987542 111 1 1 1579999999999976543 677776542321 21111111111 11 12
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-eCC---------------CCccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SKD---------------VGVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~---------------~~~~~v~f~~~~~~~~~~ 388 (498)
...+|..++.+ +.+..++++..++++++.+.|++.|.+.-+ .+. ...++++|.+++ +....
T Consensus 223 p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~ 299 (369)
T cd00614 223 PFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAA 299 (369)
T ss_pred HHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHH
Confidence 23445555444 456678899999999999999999865422 220 136799999963 11233
Q ss_pred HHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 389 FEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 389 ~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.++.+.|.--+...+ + .+.|.. ....+.+|+||+- |+.+.|++||++++
T Consensus 300 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 300 KKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred HHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 455555433211000 0 000100 1124689999984 78888899998876
No 208
>PRK08637 hypothetical protein; Provisional
Probab=99.84 E-value=5.3e-19 Score=180.93 Aligned_cols=331 Identities=12% Similarity=0.052 Sum_probs=199.9
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcC-CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
+.+.+++.+........|....+...+++.+.+++.+..+ ...+. ...+++|+|+++++.+++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--~~~I~it~G~~~al~~~~~~l~~~-------- 92 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK--MSLPIVTNALTHGLSLVADLFVDQ-------- 92 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc--cceeeEccchHHHHHHHHHHhcCC--------
Confidence 3344444332223344555566777888877777665432 22111 123789999999998888776542
Q ss_pred CCCCCCcEEEEcCCchhHHHHHH-HHcCCeeEEEEecCCccccCHHHHHHHhh----hCCeEEEEeeccCCcccccC---
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFED--- 220 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~-~~~g~~~~~v~~~~~~~~~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~--- 220 (498)
++.|++++|+|..+...+ ...|++++.+|+..+++.+|++++++.++ +.+.++++++|+||||...+
T Consensus 93 -----gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~ 167 (388)
T PRK08637 93 -----GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE 167 (388)
T ss_pred -----CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH
Confidence 478999999999999875 46899999999842235689999999887 44566778889999999855
Q ss_pred HHHHHHHHHH-----hhcccCCCceEEEecCcccccccccCCCCc---ccc-C-CCCeeEEEE-cCCc-cCCCCCCeEEE
Q 010897 221 VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDF-R-LPLVKSINV-SGHK-YGLVYAGVGWV 288 (498)
Q Consensus 221 l~~I~~la~~-----~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~---~~~-~-~~~~dsi~~-s~hK-~l~~p~g~g~~ 288 (498)
+++|+++|++ + +++|++|++|..+.. ...... ..+ . .+++.++.+ +..| ++.++.++||+
T Consensus 168 ~~~l~~~~~~~~~~~~------~~~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 168 ATAIVEAIKELADAGT------KVVAVVDDAYFGLFY--EDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred HHHHHHHHHHHHhcCC------cEEEEecccchhccc--CCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence 4556666654 6 999999999998752 111110 011 1 134434432 4455 78999999999
Q ss_pred EEeC----CCCCCccccccc-CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHH----HHHHHHHHHHHHHh
Q 010897 289 VWRT----KDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIME----NCMGNARALREGLE 359 (498)
Q Consensus 289 ~~~~----~~~l~~~~~~~~-~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~----~~~~~a~~l~~~L~ 359 (498)
++.. ...+.+.+.... .+... . . .....++|.++...+....|.+.++ ...+.++.+.+.|+
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~---~----~--~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~ 310 (388)
T PRK08637 240 TFGTKAGSSQTVKEALEKKVKGLIRS---N----I--SNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLY 310 (388)
T ss_pred EEccccCCcHHHHHHHHHHHHHHhhc---c----c--CCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8753 111111111000 00000 0 0 0123345666666665444443333 34445555667776
Q ss_pred cCC---CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHH
Q 010897 360 KTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLIS 435 (498)
Q Consensus 360 ~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~ 435 (498)
+.+ ++.+..+. +..++.++++ ..+..+++++|. ++|+.+.. .+..++|+++.. ...++++..++
T Consensus 311 ~~~~~~~~~~~~~~-~g~~~~~~l~---~~~~~~l~~~l~~~~gv~~~~-------~~~~~iRi~~~~-~~~~~i~~~~~ 378 (388)
T PRK08637 311 DGKYDDAWQAYPFN-SGYFMCLKLK---GVDAEELRVHLLEKYGIGTIA-------LNETDLRIAFSC-VEEEDIPELFD 378 (388)
T ss_pred hhCCCCCccccccc-ceEEEEecCC---hHHHHHHHHHHhhhcceEEEe-------ccCCceEEEeec-CCHHHHHHHHH
Confidence 652 35555432 3334444663 246678999985 67886642 124569999964 45677777777
Q ss_pred HHHHHHHHH
Q 010897 436 HIEEVLKEI 444 (498)
Q Consensus 436 ~l~~~l~~l 444 (498)
.|.++++.+
T Consensus 379 ~l~~~~~~~ 387 (388)
T PRK08637 379 SIYKAIKDL 387 (388)
T ss_pred HHHHHHHhc
Confidence 777666543
No 209
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=8.7e-19 Score=178.69 Aligned_cols=285 Identities=20% Similarity=0.165 Sum_probs=189.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHH
Q 010897 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARY 173 (498)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~ 173 (498)
+++++.+++++|.+. .++++||++|+.+++.++.++ +++||++...|.+ +...++.
T Consensus 64 ~~le~~la~l~g~~~-------~v~~ssG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~~ 123 (390)
T PRK08133 64 TMFQERLAALEGAEA-------CVATASGMAAILAVVMALLQA-------------GDHVVSSRSLFGSTVSLFEKIFAR 123 (390)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCcchhHHHHHHHHHHH
Confidence 345566999999864 788999999999888776432 4689999887764 3345677
Q ss_pred cCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 174 ~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
+|++++.++++ |+++++++++++|++|+++.|+||+|.+.|+++|.++|+++ |+++++|++++.+..
T Consensus 124 ~G~~v~~vd~~------d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~------gi~livD~t~~~~~~- 190 (390)
T PRK08133 124 FGIETTFVDLT------DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAA------GALLVVDNCFCTPAL- 190 (390)
T ss_pred cCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 89999888753 68899999999999999999999999999999999999999 999999999876431
Q ss_pred ccCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..| . . .++|.+..|.+|+++++.. +|++++.+++.+ ..+. .++... +.. .....+|..+
T Consensus 191 -~~p-l--~---~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~-~~~~---~~~~~~-------g~~--~~~~~a~~~l 250 (390)
T PRK08133 191 -QQP-L--K---LGADVVIHSATKYLDGQGRVLGGAVVGSKELM-EEVF---GFLRTA-------GPT--LSPFNAWVFL 250 (390)
T ss_pred -CCc-h--h---hCCcEEEeecceeecCCcceEeEEEEcCHHHH-HHHH---HHHHHh-------CCC--CCHHHHHHHH
Confidence 111 1 1 1478899999999876543 444444433222 1110 011000 111 1223344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee-CC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS-KD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
+ |.+.+..++++..+++..+.+.|++.|++.-+. +. ...++++|.+++. .....++.+.|.
T Consensus 251 ~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~-~~~~~~f~~~l~ 327 (390)
T PRK08133 251 K--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-REAAWRVIDATR 327 (390)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC-HHHHHHHHHhCC
Confidence 3 445788889999999999999999998765322 21 0246999999531 112345555553
Q ss_pred hcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 397 ~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
--..... . .+.|.. .-..+.+|+||+- |+.|.|++||+++++
T Consensus 328 l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 328 LISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred cceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 2111100 0 001110 1124689999984 678888999998875
No 210
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=1.1e-18 Score=176.69 Aligned_cols=326 Identities=16% Similarity=0.102 Sum_probs=207.3
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g 149 (498)
.+..+++.+.++.++... ..+...++|++ +++++|.+. ++.+++||.|+++++.++.-+
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~----~a~~~g~~~-------~~~~~sgt~Al~~al~~l~~~--------- 63 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKE----FAEYFGVKY-------AVAVSSGTSALHLALRALGLG--------- 63 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHTTGG---------
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHH----HHHHhCCCe-------EEEeCChhHHHHHHHHhcCCC---------
Confidence 445667777787775432 25677777776 788888765 999999999999999886432
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHH
Q 010897 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (498)
Q Consensus 150 ~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~ 229 (498)
.+++|++|..++.+...++..+|++++.++++++++.||+++++++|+++|++|+++ +..|...|+++|.++|+
T Consensus 64 ---~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~---h~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 64 ---PGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVV---HLFGNPADMDAIRAIAR 137 (363)
T ss_dssp ---TTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHH
T ss_pred ---cCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEe---cCCCCcccHHHHHHHHH
Confidence 247999999999999999999999999999997789999999999999999988655 45788889999999999
Q ss_pred HhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccccc-CccC
Q 010897 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI-NYLG 308 (498)
Q Consensus 230 ~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~-~yl~ 308 (498)
++ |++|+.|+|++.+.. +....... ...+-.+++...|.+.++-| |++++++++.......+.. ....
T Consensus 138 ~~------~i~lIeD~a~a~g~~--~~g~~~G~--~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~~ 206 (363)
T PF01041_consen 138 KH------GIPLIEDAAQAFGAR--YKGRPVGS--FGDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRSR 206 (363)
T ss_dssp HT------T-EEEEE-TTTTT-E--ETTEETTS--SSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEET
T ss_pred Hc------CCcEEEccccccCce--eCCEeccC--CCCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcCc
Confidence 99 999999999987652 22111111 22344555556688855444 7788777543211111110 0000
Q ss_pred CCCCC------ccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC-----ccEEE
Q 010897 309 SDQPT------FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG-----VPLVA 377 (498)
Q Consensus 309 ~~~~~------~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-----~~~v~ 377 (498)
..... +++++.-+..++.-...+| +.+.+.+++..++++++.+.|.+++++..+..+.. ...+.
T Consensus 207 ~~~~~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~ 281 (363)
T PF01041_consen 207 DAFRRYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFP 281 (363)
T ss_dssp SECSTTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEE
T ss_pred cccccccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccc
Confidence 00000 2222222222222222222 44677888888999999999999998866554322 12445
Q ss_pred EEecCCCCCCHHHHHHHHHhcCcEeeeecC-CCC----CC----------------CeeEEEEeecCCCCHHHHHHHHHH
Q 010897 378 FSLKDSSAHTVFEISEGLRKFGWIVPAYTM-PAN----AE----------------NVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~-~~~----~~----------------~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
+.+++....+..++.+.|.++|+....+.. |.. .. ....|-+-+....+.++++++++.
T Consensus 282 i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ 361 (363)
T PF01041_consen 282 IRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEA 361 (363)
T ss_dssp EEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhc
Confidence 566543224678999999999998754431 111 00 024566666777788888777766
Q ss_pred HH
Q 010897 437 IE 438 (498)
Q Consensus 437 l~ 438 (498)
|+
T Consensus 362 ir 363 (363)
T PF01041_consen 362 IR 363 (363)
T ss_dssp HH
T ss_pred cC
Confidence 54
No 211
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=9e-19 Score=177.31 Aligned_cols=293 Identities=17% Similarity=0.127 Sum_probs=195.0
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~ 169 (498)
.|....+|+. ++++.|... +++++||++|+..++.++.++ +++||++++.|..+..
T Consensus 60 npt~~~Le~~----iA~le~~~~-------~~~~~sG~~Ai~~~l~all~~-------------GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGAG-------TALYPSGAAAISNALLSFLKA-------------GDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHH
Confidence 3444555554 777776542 789999999998888776442 5789999998876664
Q ss_pred H----HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 170 ~----~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
. ...+|++++.++.+ |.+.++++++++|++|++++|+||+|.+.|+++|+++|+++ |++++||+
T Consensus 116 l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~------g~~lvvD~ 183 (394)
T PRK09028 116 LCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEH------DIVVMLDN 183 (394)
T ss_pred HHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34578887776532 45789999999999999999999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe--EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchH
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~--g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~ 323 (498)
+|+.+.. ..| . + -++|++..|.|||++++.++ |++ +.+++.. +.+.....++|.. .
T Consensus 184 t~a~p~~--~~P-l--~---~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~-~~l~~~~~~~G~~------------~ 241 (394)
T PRK09028 184 TWASPIN--SRP-F--E---MGVDISIQAATKYIVGHSDVMLGTA-TANEKHW-DQLREHSYLMGQC------------T 241 (394)
T ss_pred Ccccccc--CCc-c--c---cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHH-HHHHHHHHhcCCC------------C
Confidence 9987531 112 1 1 26999999999999988654 544 4443221 1111111112211 1
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCC
Q 010897 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHT 387 (498)
Q Consensus 324 ~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~ 387 (498)
.....|.. ..|-..+..++++..+++..+.+.|++.|.++ ++.+. ...++++|.+++.+...
T Consensus 242 ~p~~a~l~--~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 319 (394)
T PRK09028 242 SPDDVYLA--MRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKA 319 (394)
T ss_pred CHHHHHHH--HcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 22234433 34556788999999999999999999998764 43321 02469999996321112
Q ss_pred HHHHHHHHHhcCcEee-----e-ecCCCC----------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 388 VFEISEGLRKFGWIVP-----A-YTMPAN----------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 388 ~~~l~~~L~~~G~~v~-----~-~~~~~~----------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
..++.+.|.--....+ + ...|.. ......+|+||+- |+.+.|++||+++++..+.
T Consensus 320 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 320 VTALVEGMQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred HHHHHHhCCcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHH
Confidence 3455555542111100 0 001100 0112579999984 6888889999999986543
No 212
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=4.2e-19 Score=180.99 Aligned_cols=286 Identities=15% Similarity=0.084 Sum_probs=198.2
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~ 174 (498)
++.+.+++++|.+. +++++||++|+.+++.++.++ +++|+++++.|..+. ..++.+
T Consensus 69 ~Le~~lA~l~g~~~-------~l~~~sgt~Ai~~~l~al~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 69 ALAQRLAEIEGGRH-------ALLQPSGLAAISLVYFGLVKA-------------GDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred HHHHHHHHHhCCCe-------EEEeccHHHHHHHHHHHHhCC-------------CCEEEEecCCcccHHHHHHHHHHhc
Confidence 45556899999753 899999999999998887432 579999999998755 456778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++.. +.+.++++++++|++|++++|+|++|...|+++|.++|+++ ++++++|++|+.+..
T Consensus 129 Gi~v~~vd~~------~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~------gi~livD~a~a~~~~-- 194 (394)
T PRK07050 129 GITVRFYDPL------IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARAR------GVVTAIDNTYSAGLA-- 194 (394)
T ss_pred CeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 9988887642 45788999999999999999999999999999999999999 999999999976542
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ + + .++|++..|.+||+.++.+ .|++++++++.. +.+.....+++. +. .....|.++
T Consensus 195 ~~~-l--~---~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~-~~~~~~~~~~G~---------~~---~~~~a~l~l 255 (394)
T PRK07050 195 FKP-F--E---HGVDISVQALTKYQSGGSDVLMGATITADAELH-AKLKLARMRLGI---------GV---SADDCSLVL 255 (394)
T ss_pred cCH-H--H---cCCeEEEEECCceecCCCCeeEEEEEECCHHHH-HHHHHHHHhcCC---------CC---CHHHHHHHH
Confidence 211 1 1 2579999999999987776 577776665322 211111112221 11 223345554
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee-CC---------------CCccEEEEEecCC-CCCCHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS-KD---------------VGVPLVAFSLKDS-SAHTVFEISEGL 395 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~---------------~~~~~v~f~~~~~-~~~~~~~l~~~L 395 (498)
+ |.+.+..++++..+++.++.+.|++.|.+.-+. +. ...+++.|.+.+. ...+..++.+.|
T Consensus 256 r--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l 333 (394)
T PRK07050 256 R--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL 333 (394)
T ss_pred c--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC
Confidence 3 334567789999999999999999988754332 11 1245788888542 123456777777
Q ss_pred HhcCcEee-----eecCCCC---------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 396 RKFGWIVP-----AYTMPAN---------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 396 ~~~G~~v~-----~~~~~~~---------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
...++..+ +...|.. ....+.+|+||+- |+.+.|++||+++++.
T Consensus 334 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 334 ELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred CCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 76553221 0001110 0123689999984 6788889999988865
No 213
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.7e-18 Score=176.52 Aligned_cols=288 Identities=17% Similarity=0.105 Sum_probs=190.1
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|...++|+ .+++++|.+. .+.+++|++|+.+++.++.++ +++|+++.+.|......
T Consensus 61 p~~~~Le~----~lA~~~g~~~-------~i~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~t~~~ 116 (388)
T PRK07811 61 PTRTALEE----QLAALEGGAY-------GRAFSSGMAATDCLLRAVLRP-------------GDHIVIPNDAYGGTFRL 116 (388)
T ss_pred ccHHHHHH----HHHHHhCCCc-------eEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchHHHHH
Confidence 44445554 4888899875 566677899999888887442 46899999998854332
Q ss_pred H----HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 171 ~----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
. +..|++++.++. .|+++++++++++|++|+++.|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 117 ~~~~~~~~gi~~~~~d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~------gi~lIvD~a 184 (388)
T PRK07811 117 IDKVFTRWGVEYTPVDL------SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDA------GAKVVVDNT 184 (388)
T ss_pred HHHhCcCCCeEEEEeCC------CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 234776666653 489999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
|+.+.. ..+ . . .++|++..|.+||+.++.+ .|++++++++.. ..+.....+.+.. ..
T Consensus 185 ~a~~~~--~~p-~----~-~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~~~~~~~g~~------------~s 243 (388)
T PRK07811 185 FASPYL--QQP-L----A-LGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFAFLQNGAGAV------------PG 243 (388)
T ss_pred CCcccc--CCc-h----h-hCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHHHHHHhcCCC------------CC
Confidence 986532 111 1 1 2589999999999987755 588877664321 2111111111110 11
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCCC---------------CccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKDV---------------GVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~---------------~~~~v~f~~~~~~~~~~ 388 (498)
....|.+++.+ +.+..++++..+++..+.+.|++.|.+. +..+.- ..++++|.+++. ....
T Consensus 244 ~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~ 320 (388)
T PRK07811 244 PFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG-EEAA 320 (388)
T ss_pred HHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC-HHHH
Confidence 22334444333 3467888889999999999999998765 332210 245999999632 1223
Q ss_pred HHHHHHHHhcCcEee-----e-ecCCCC-----------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 389 FEISEGLRKFGWIVP-----A-YTMPAN-----------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 389 ~~l~~~L~~~G~~v~-----~-~~~~~~-----------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.++.+.|.--.+..+ + .+.|.. ....+.+|+||+- |+.+.|++||+++++
T Consensus 321 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 321 RDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred HHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 455555543111100 0 000100 1124689999984 678888899988875
No 214
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.4e-18 Score=175.50 Aligned_cols=287 Identities=16% Similarity=0.080 Sum_probs=190.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~ 174 (498)
++.+.+++++|.+. .+++++|++|+.+++.++..+ +++|+++.+.|.... ..++..
T Consensus 68 ~le~~lA~l~g~~~-------~i~~ssG~~Ai~~~l~all~~-------------GD~Vi~~~~~y~~~~~~~~~~~~~~ 127 (398)
T PRK08249 68 AFEEKVRILEGAEA-------ATAFSTGMAAISNTLYTFLKP-------------GDRVVSIKDTYGGTNKIFTEFLPRM 127 (398)
T ss_pred HHHHHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHHHHHHHHhhC
Confidence 44455899999754 677788899998888776432 468999999998643 445667
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++|+++|++|+++.|+||+|.+.|+++|.++|+++ |++++||++|+.+..
T Consensus 128 Gi~v~~vd~------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~------gi~livD~t~a~~~~-- 193 (398)
T PRK08249 128 GVDVTLCET------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKV------GALVVVDNTFATPIN-- 193 (398)
T ss_pred CeEEEEcCC------CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCcCcccc--
Confidence 888776652 589999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
.... . .++|.+..|.+|+++++.. +|++++.+++.. +.+....... +.. .....+|.+++
T Consensus 194 -~~~l----~-~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~-~~l~~~~~~~----------g~~--~s~~~a~l~l~ 254 (398)
T PRK08249 194 -QNPL----A-LGADLVIHSATKFLSGHADALGGVVCGSKELM-EQVYHYREIN----------GAT--MDPMSAYLILR 254 (398)
T ss_pred -CCch----h-hCCCEEeccCceecCCCCCceEEEEECCHHHH-HHHHHHHHhc----------CCC--CCHHHHHHHHh
Confidence 1111 1 2578888999999976543 444444544322 2111101111 111 22334444443
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHHh
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
+.+.+..++++..++++.+.+.|++.|.++ +..|. ...++++|.+++. .....++.+.|.-
T Consensus 255 --~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~-~~~~~~f~~~l~l 331 (398)
T PRK08249 255 --GMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG-MDTVKRLLPKLRY 331 (398)
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC-HHHHHHHHHhCCc
Confidence 345567888999999999999999988765 33221 0246899998632 1123455555542
Q ss_pred c--CcEee---e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 398 F--GWIVP---A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 398 ~--G~~v~---~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
- +..+- + .+.|.. .-..+.+|+||+- |+.+.|++||+++++.++
T Consensus 332 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 332 AHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred ceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHhh
Confidence 2 11000 0 001100 1124689999984 788889999999998654
No 215
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=5.5e-20 Score=180.90 Aligned_cols=227 Identities=15% Similarity=0.050 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCC
Q 010897 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (498)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~ 176 (498)
-+++++.+++++|.+. ..++++|+|+++..++.++.++ +++|+++.++|.++..++...|+
T Consensus 61 i~~~~~~~A~~~ga~~------~~~~~~Gst~a~~~~l~al~~~-------------gd~Vlv~~~~h~s~~~~~~~~g~ 121 (294)
T cd00615 61 IKEAQELAARAFGAKH------TFFLVNGTSSSNKAVILAVCGP-------------GDKILIDRNCHKSVINGLVLSGA 121 (294)
T ss_pred HHHHHHHHHHHhCCCC------EEEEcCcHHHHHHHHHHHcCCC-------------CCEEEEeCCchHHHHHHHHHCCC
Confidence 3466677999999763 2455899999998887776432 57999999999999999999999
Q ss_pred eeEEEEecCCc-----cccCHHHHHHHhhh--CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccc
Q 010897 177 ELKEVKLEEGY-----YVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (498)
Q Consensus 177 ~~~~v~~~~~~-----~~~d~~~L~~~i~~--~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g 249 (498)
+++.++++.+. +.+|++++++++.+ ++++|++++| |++|.+.|+++|.++|+++ |++++||+||+.
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~------g~~livDeA~~~ 194 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR------GLPVLVDEAHGA 194 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc------CCeEEEECcchh
Confidence 99999875322 36899999999964 5788999988 6899999999999999999 999999999986
Q ss_pred ccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHH
Q 010897 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (498)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~ 329 (498)
+. . +.+..+......++|+++.|+||++.++.++|++.+++.......+......+. .++.+...+.++-
T Consensus 195 ~~-~-~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~--------ttsps~~~~asl~ 264 (294)
T cd00615 195 HF-R-FHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQ--------STSPSYLILASLD 264 (294)
T ss_pred hh-c-cCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHC--------CCCcHHHHHHHHH
Confidence 43 1 222222222234689999999999877777787776654111111110001110 1333334445555
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 330 YQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 330 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
.++..+..+| .+.+++..++++++++.|.+
T Consensus 265 ~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 265 VARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 6666554455 45678888899999888753
No 216
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=4.9e-19 Score=179.18 Aligned_cols=290 Identities=16% Similarity=0.122 Sum_probs=195.6
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~ 169 (498)
.|....+|++ ++++.|.+. +++++||++|+..++.++.++ +++||++++.|..+..
T Consensus 49 nPt~~~lE~~----lA~l~g~~~-------~~~~~sG~~Ai~~al~all~~-------------GD~Vl~~~~~y~~t~~ 104 (377)
T TIGR01324 49 TLTHFALQDA----MCELEGGAG-------CYLYPSGLAAVTNSILAFVKA-------------GDHVLMVDSAYEPTRY 104 (377)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEcCCCcHHHHH
Confidence 3555666665 888888764 888999999999888877432 4789999988876654
Q ss_pred H----HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 170 ~----~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
. ++.+|++++.++.. +.+.++++++++|++|++.+++|++|.+.|+++|+++|+++ |++++||+
T Consensus 105 ~~~~~~~~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~------g~~livD~ 172 (377)
T TIGR01324 105 FCDIVLKRMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNP------GIVIMIDN 172 (377)
T ss_pred HHHHHHHhcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 35578887766432 23789999999999999999999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchH
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~ 323 (498)
+|+.+.. ..| . + .++|++..|.+||++++.+ .|+++. +++.+ ..+. ...+..+ .+.+
T Consensus 173 t~a~g~~--~~p-l--~---~gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~-~~l~-~~~~~~G--------~~l~-- 231 (377)
T TIGR01324 173 TWAAGLL--FKP-L--E---HGVDISIQAGTKYLVGHSDIMIGTVVA-NARTW-DQLR-EHSYLMG--------QMVD-- 231 (377)
T ss_pred CCccccc--cCc-c--c---cCceEEEecCceeccCCCCceEEEEEe-CHHHH-HHHH-HHHHHhC--------CCCC--
Confidence 9987642 111 1 1 2689999999999988866 465554 33222 1111 0111111 1111
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCC
Q 010897 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHT 387 (498)
Q Consensus 324 ~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~ 387 (498)
....|..++ |.+.+..++++..+++..+.+.|++.|.+. ++.+. ...++++|++++.....
T Consensus 232 -p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~ 308 (377)
T TIGR01324 232 -ADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQ 308 (377)
T ss_pred -HHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 133344443 334566779999999999999999988763 43331 13569999996422223
Q ss_pred HHHHHHHHHhcCcEeee-----ecCCCC-----------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 388 VFEISEGLRKFGWIVPA-----YTMPAN-----------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 388 ~~~l~~~L~~~G~~v~~-----~~~~~~-----------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..++.+.|.-.++.++- ...++. ......+|+||+- |+.+.|++||+++++.
T Consensus 309 ~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 309 VHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 45777777654432210 000100 0112579999984 6888889999988864
No 217
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.84 E-value=5.3e-19 Score=181.84 Aligned_cols=307 Identities=15% Similarity=0.080 Sum_probs=195.1
Q ss_pred CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCccee--eecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC
Q 010897 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV--GTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (498)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~ 162 (498)
..|....+..++++.+.+|+.+..+.+.+. + .+. .|.|+++|+.+++.++..-. ..+++|+++++
T Consensus 66 ~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~--~v~~~~t~G~~~al~~~~~~l~~~~----------~~Gd~Vlv~~P 132 (404)
T PTZ00376 66 KEYLPIEGLQSFIEAAQKLLFGEASYALAE-K--RIATVQALSGTGALRLGFEFLKRFL----------PAGTTVYVSNP 132 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcccccc-C--eEEEeeccCcchHHHHHHHHHHHhc----------CCCCEEEEcCC
Confidence 456666788889988888875543332111 1 244 58899999877765432110 02479999999
Q ss_pred chhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhh---hCCeEEEEeeccCCcccccC---HHHHHHHHHHhhccc
Q 010897 163 VQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEET 235 (498)
Q Consensus 163 ~h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~---~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~ 235 (498)
+|..+...++..|++++.+|+. ++++.+|++.+++++. ++++++++++|+||||.+.+ +++|.++|++|
T Consensus 133 ~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~---- 208 (404)
T PTZ00376 133 TWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK---- 208 (404)
T ss_pred CchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC----
Confidence 9999999999999999999994 3458899999999885 34677878999999999954 56678889999
Q ss_pred CCCceEEEecCcccccccccCCCC--cccc--CCCCeeEEEEcCCccCC-CCCCeEEEEE--eCCCCCCcccccccC-cc
Q 010897 236 GWDTPIHVDAASGGFIAPFLYPDL--EWDF--RLPLVKSINVSGHKYGL-VYAGVGWVVW--RTKDDLPDELVFHIN-YL 307 (498)
Q Consensus 236 ~~~~~l~vD~A~~g~~~~~~~~~~--~~~~--~~~~~dsi~~s~hK~l~-~p~g~g~~~~--~~~~~l~~~~~~~~~-yl 307 (498)
+++|++|++|..+......... ...+ ..+++ .+..|..|.+. ++.++||+++ .+++.. ..+..... +.
T Consensus 209 --~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~-~~l~~~~~~~~ 284 (404)
T PTZ00376 209 --NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF-LVAQSFSKNMGLYGERIGALHIVCANKEEA-ANVLSQLKLII 284 (404)
T ss_pred --CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE-EEEEeCCCcccccccccceEEEEeCCHHHH-HHHHHHHHHHH
Confidence 9999999999987521000000 0011 11233 44456677665 7899999853 343211 11100000 00
Q ss_pred CCCCCCccccCCCchHHHHHHHHHHHHhcHHH--------HHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCCCccEE
Q 010897 308 GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG--------YKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLV 376 (498)
Q Consensus 308 ~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g--------~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v 376 (498)
.. . ++ ....++|.++...+.... .++..++..++++.+.+.|++.+ ++....+ ..++.
T Consensus 285 ~~---~----~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p--~gg~f 353 (404)
T PTZ00376 285 RP---M----YS--SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN--QIGMF 353 (404)
T ss_pred hh---h----cC--CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc--CceEE
Confidence 00 0 00 012344555555553321 23445567788888999998874 2433333 34555
Q ss_pred EE-EecCCCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 377 AF-SLKDSSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 377 ~f-~~~~~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.| ++ + .+++++|.++ |+.+. |. + ||+++. .+.++++.+++.|++++.
T Consensus 354 ~~~~~------~-~~~~~~L~~~~~v~v~----p~-----~--Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 354 SFTGL------T-KEQVERLIEKYHIYLL----DN-----G--RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred EecCC------C-HHHHHHHHHhCCEeec----CC-----C--eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 44 22 2 3788888887 76542 21 1 999953 678899999999998865
No 218
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.83 E-value=3.6e-18 Score=174.61 Aligned_cols=336 Identities=12% Similarity=0.096 Sum_probs=213.6
Q ss_pred HHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCC
Q 010897 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (498)
Q Consensus 71 ~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~ 150 (498)
.+.+.+-+++..+...|..+++..++|++ +++++|.+. ++.|+||++|+.+++.++.++
T Consensus 33 ams~~~~~a~~~gd~~Y~~~~g~~~Leea----ia~~~g~~~-------vv~t~~Gt~Al~la~~al~~p---------- 91 (431)
T cd00617 33 AMSDYQWAAMMLGDEAYAGSKSFYDLEDA----VQDLFGFKH-------IIPTHQGRGAENILFSILLKP---------- 91 (431)
T ss_pred HHHHHHHHHHHhCCCccCCCCCHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHHhCCC----------
Confidence 33344444444433346677777777776 677788864 899999999999988877442
Q ss_pred CCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCC---------ccccCHHHHHHHhhhC----CeEEEEeeccCCc-c
Q 010897 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDEN----TICVAAILGSTLT-G 216 (498)
Q Consensus 151 ~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~---------~~~~d~~~L~~~i~~~----t~~v~~~~~~t~t-G 216 (498)
+++| ++.+.+.++...+.+.|+.++.++++++ .+.+|+++|+++|+++ +++|+++.++|++ |
T Consensus 92 ---GD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG 167 (431)
T cd00617 92 ---GRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGG 167 (431)
T ss_pred ---CCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCC
Confidence 3555 6777777888889999999999999732 2459999999999865 7889999999998 7
Q ss_pred ccc---CHHHHHHHHHHhhcccCCCceEEEecCccccccccc-------CCCCcccc---CCCCeeEEEEcCCccCCCCC
Q 010897 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-------YPDLEWDF---RLPLVKSINVSGHKYGLVYA 283 (498)
Q Consensus 217 ~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~-------~~~~~~~~---~~~~~dsi~~s~hK~l~~p~ 283 (498)
... ++++|.++|+++ |++||.|+|+....+-|. ......+. -....|++++|+||-++++.
T Consensus 168 ~~~s~~~l~~i~eia~~~------gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~ 241 (431)
T cd00617 168 QPVSMANLREVRELAHKY------GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI 241 (431)
T ss_pred ccCCHHHHHHHHHHHHHc------CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc
Confidence 775 566789999999 999999999643211011 00000011 02358999999999888776
Q ss_pred CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 284 g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
.|+++.++++.... .. .+.. ....+...+.-.+..+.++..+|....+ .+.+++..+.+++|.+.|++.|
T Consensus 242 -GG~i~~~d~~l~~~-~~---~~~~-~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G- 311 (431)
T cd00617 242 -GGFLALRDDELYEE-AR---QRVV-LYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAG- 311 (431)
T ss_pred -ceEEEeCcHHHHHH-HH---Hhcc-ccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCC-
Confidence 36777766433222 11 1110 0011110011112233333334432111 2445666667799999999986
Q ss_pred eEEeeCCCCccEEEEEecC------CCCCCHHHHHHHHHh-cCcEeeee---cCCCC--C-----CCeeEEEEeec-CCC
Q 010897 364 FEILSKDVGVPLVAFSLKD------SSAHTVFEISEGLRK-FGWIVPAY---TMPAN--A-----ENVAVLRVVVR-EDF 425 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~------~~~~~~~~l~~~L~~-~G~~v~~~---~~~~~--~-----~~~~~lRv~v~-~~~ 425 (498)
+.+..+. +...+.++++. ...++..+++..|.+ .|+.+... .++.. . .....+|+++- .-.
T Consensus 312 ~~v~~P~-Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~ 390 (431)
T cd00617 312 VPIVEPA-GGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVY 390 (431)
T ss_pred CCccCCC-cceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecccccc
Confidence 8776553 56666666541 123467788866554 55654321 11111 1 12467999983 467
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCc
Q 010897 426 SRSLVERLISHIEEVLKEIESLP 448 (498)
Q Consensus 426 t~~~~~~l~~~l~~~l~~l~~~~ 448 (498)
|.+.+|.+.+.|..+++.-+..+
T Consensus 391 t~~~~~~~~~~~~~~~~~~~~~~ 413 (431)
T cd00617 391 TQDHMDYVAAAVIALYERREDIR 413 (431)
T ss_pred CHHHHHHHHHHHHHHHhhHhhCC
Confidence 99999999999998887755553
No 219
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=7.3e-19 Score=178.51 Aligned_cols=283 Identities=15% Similarity=0.116 Sum_probs=193.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH----HHHH
Q 010897 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (498)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~----~~~~ 173 (498)
+++.+.+++++|.+. .+++++|+.|+.+++. +.+ .+++|+++++.|.++.. .+..
T Consensus 50 ~~le~~la~l~g~~~-------~l~~~sG~~al~~~l~-ll~-------------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKADR-------AFAFSSGMAALDVITR-LLN-------------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 356666999999853 6667777777765443 221 14689999988886554 4566
Q ss_pred cCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 174 ~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
.|++++.+++ .|+++++++++++|++|++++++|++|.+.|+++|+++|+++ |++++||++++...
T Consensus 109 ~G~~v~~vd~------~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~------g~~vivD~a~~~~~-- 174 (378)
T TIGR01329 109 SGVVVVHVDT------TDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ------NALVVVDNTMMSPL-- 174 (378)
T ss_pred cCcEEEEeCC------CCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCcccc--
Confidence 8999988875 278999999999999999999999999999999999999999 99999999986543
Q ss_pred ccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHH
Q 010897 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ 331 (498)
Q Consensus 254 ~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~ 331 (498)
..... . .++|++..|+|||++++.+ .|++++++++.. +.+.......+. . ......|.
T Consensus 175 -~~~~l----~-~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~-~~~~~~~~~~G~----------~--~~~~~a~l- 234 (378)
T TIGR01329 175 -LCNPL----E-LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIA-KKVYFLQNSTGS----------G--LAPFDCWL- 234 (378)
T ss_pred -cCChh----h-cCCcEEEEecceeccCCccceeEEEEeCcHHHH-HHHHHHHHhcCC----------c--CCHHHHHH-
Confidence 11111 1 1589999999999998877 788887664321 111100000111 1 11112232
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCC-HHHHHHH
Q 010897 332 FIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHT-VFEISEG 394 (498)
Q Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~-~~~l~~~ 394 (498)
...+.+.+..++++..+++..+.+.|++.|.+. +..+. ...++++|.+ + +.+ ..++++.
T Consensus 235 -~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~--~~~~~~~~~~~ 310 (378)
T TIGR01329 235 -LLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-G--SVALSKRLVEA 310 (378)
T ss_pred -HHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-C--CHHHHHHHHHh
Confidence 233446678889999999999999999888642 22211 1346999999 3 233 6788888
Q ss_pred HHhcCcEeeeec------CCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 395 LRKFGWIVPAYT------MPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 395 L~~~G~~v~~~~------~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
|...++.++... .|.. .-..+.+|+||+- |+.+.|++||+++++.
T Consensus 311 L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 311 TKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred CcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 866554432110 0110 0124689999984 7888899999998874
No 220
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=2.1e-18 Score=175.22 Aligned_cols=284 Identities=19% Similarity=0.102 Sum_probs=189.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH----HHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~----~~~~ 174 (498)
++.+.++++.|.+. +++++|+++|+.+++.++..+ +++|+++.+.|...... +...
T Consensus 55 ~le~~lA~l~g~~~-------v~~~~gg~~Ai~~~l~all~~-------------GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 55 LLQQALAELEGGAG-------AVVTNTGMSAIHLVTTALLGP-------------DDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 44455889888532 899999999999888887432 47899999999854432 2223
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|+++..++ . .|+++++++++++|++|++++|+||||.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 115 ~~~v~~~d---~---~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 180 (382)
T TIGR02080 115 CFRVLFVD---Q---GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAV------GAVVVVDNTFLSPAL-- 180 (382)
T ss_pred CeEEEEEC---C---CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 44444442 1 479999999999999999999999999999999999999999 999999999976532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ +. .++|.+..|.+||+.++.+ .|+++.++++.. +.+.....+++.. ...+..|..+
T Consensus 181 ~~p-----l~-~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~-~~l~~~~~~~g~~------------~sp~~a~l~l 241 (382)
T TIGR02080 181 QNP-----LA-LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVA-EELAWWANNLGVT------------GGAFDSYLTL 241 (382)
T ss_pred CCc-----hh-hCCCEEEeecceeccCCCCceeEEEEeCCHHHH-HHHHHHHHccCCC------------CCHHHHHHHH
Confidence 111 11 1478899999999988777 677776655322 2111111222211 1223344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
+ |.+.+..++++..+++..+.+.|++.|.++ |..+. ...++++|.+++. .....++.+.|.
T Consensus 242 r--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~ 318 (382)
T TIGR02080 242 R--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG-EQTVRRFLGGLS 318 (382)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc-HHHHHHHHHcCC
Confidence 3 445677889999999999999999998765 33221 0245999999631 112345555554
Q ss_pred hcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 397 ~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
--+...+ + .+.|.. .-..+.+|+||+- |+.+.|++||+++++
T Consensus 319 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 319 LFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred cceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 3221110 0 000100 1124689999984 688888999998886
No 221
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=3.2e-18 Score=174.93 Aligned_cols=284 Identities=15% Similarity=0.072 Sum_probs=188.4
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch----hHHHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ----VCWEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h----~~~~~~~~~~ 174 (498)
++.+.+|++.|.+. .+.+++|+.|+..++.++..+ +++|+++...| ..+...++..
T Consensus 74 ~le~~lA~l~g~~~-------al~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 74 MFEERLRLIEGAEA-------CFATASGMSAVFTALGALLGA-------------GDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred HHHHHHHHHhCCCc-------EEEECChHHHHHHHHHHHhCC-------------CCEEEEccCCcchHHHHHHHHHHHc
Confidence 34445899999764 888999999998877776432 46898887544 4556677888
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++++++|++|++..|+||+|.+.|+++|.++|+++ +++++||++|+.+..
T Consensus 134 G~~v~~vd~------~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~------g~~vivD~a~a~~~~-- 199 (403)
T PRK07810 134 GVETVFVDG------EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAA------GAKVVLDNVFATPLL-- 199 (403)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 999988863 389999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ . . .++|.+..|.+||+.++-. .|+++.++ +.+...+....... +.. .....+|.++
T Consensus 200 ~~~-~--~---~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~~~~~~~----------g~~--~s~~~a~l~l 260 (403)
T PRK07810 200 QRG-L--P---LGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQKLMRHT----------GPA--LSAFNAWVLL 260 (403)
T ss_pred CCh-h--h---cCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHHHHHHHh----------CCC--CCHHHHHHHH
Confidence 111 1 1 2589999999999976433 46666443 22211111000011 111 2233344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeC-----C----------CCccEEEEEecCCC---CCCHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSK-----D----------VGVPLVAFSLKDSS---AHTVFEISE 393 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~----------~~~~~v~f~~~~~~---~~~~~~l~~ 393 (498)
+ +.+.+..++++..+++.++.+.|++.|.+. +..+ + ...++++|.+++.. .....++++
T Consensus 261 ~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~ 338 (403)
T PRK07810 261 K--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLD 338 (403)
T ss_pred h--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHH
Confidence 3 445678899999999999999999998765 3322 1 13468999996421 111245555
Q ss_pred HHHhcCcEee-----e-ecCCC--------------CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 394 GLRKFGWIVP-----A-YTMPA--------------NAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 394 ~L~~~G~~v~-----~-~~~~~--------------~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+|+--..... + ...|. .....+.+|++++- |+.+.|++||++++
T Consensus 339 ~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 339 KLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred hCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 4432111000 0 00111 01124579999984 67888888888775
No 222
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2e-18 Score=175.99 Aligned_cols=284 Identities=18% Similarity=0.141 Sum_probs=186.0
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh----HHHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV----CWEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~----~~~~~~~~~ 174 (498)
++++.+++++|.+. .+.+++|+.|+.+++. +.. .+++||++++.|. .+...++..
T Consensus 58 ~le~~lA~l~g~~~-------~v~~~sG~~ai~~~l~-~l~-------------~Gd~Vlv~~~~y~~~~~~~~~~~~~~ 116 (390)
T PRK08064 58 ALEDIIAELEGGTK-------GFAFASGMAAISTAFL-LLS-------------KGDHVLISEDVYGGTYRMITEVLSRF 116 (390)
T ss_pred HHHHHHHHHhCCCC-------eEEECCHHHHHHHHHH-HhC-------------CCCEEEEccCccchHHHHHHHHHHHc
Confidence 34455999999763 4555666777766554 222 1468999998776 344566778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++++ |+++++++++++|++|++++|+||||.+.|+++|.++|+++ +++++||++|+.+..
T Consensus 117 G~~v~~v~~~------d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 182 (390)
T PRK08064 117 GIEHTFVDMT------NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAI------GCLTFVDNTFLTPLL-- 182 (390)
T ss_pred CCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 9999998752 68999999999999999999999999999999999999999 999999999987542
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ . + .++|++..|+|||+.++.| .|++++++++.. +.+..... .++ ... .....|..+
T Consensus 183 ~~~-~--~---~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~-~~l~~~~~-------~~g--~~~---~~~~a~l~~ 243 (390)
T PRK08064 183 QKP-L--D---LGADVVLHSATKFLAGHSDVLAGLAVVKDEELA-QKLYFLQN-------SFG--AVL---GVQDCWLVL 243 (390)
T ss_pred cCc-h--h---hCCcEEEeecceeccCCccceeEEEEeCCHHHH-HHHHHHHH-------hcC--CCC---CHHHHHHHH
Confidence 111 1 1 2579999999999988887 487776654322 11110000 000 111 111223222
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.|...+..++++..+++..+.+.|++.|.+. ++.+. ...++++|.+.+ ..++.+.+.
T Consensus 244 --~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-----~~~~~~f~~ 316 (390)
T PRK08064 244 --RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-----EEAVRQFVS 316 (390)
T ss_pred --cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHH
Confidence 3445567889999999999999999888642 32221 134599999843 223444444
Q ss_pred hcCcEeee---e--------------c-CCCC---C--CCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 397 KFGWIVPA---Y--------------T-MPAN---A--ENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 397 ~~G~~v~~---~--------------~-~~~~---~--~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
..+++-.+ . + .+.. . ...+.+|+|++- |+++.+++||+++++.+++.
T Consensus 317 ~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl----e~~~dli~dl~~Al~~~~~~ 386 (390)
T PRK08064 317 HVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL----ENVDDLIADFEQALSYVEEP 386 (390)
T ss_pred hCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhcccC
Confidence 44442111 0 0 0100 0 124689999985 56666778888888776444
No 223
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.83 E-value=5.2e-18 Score=176.33 Aligned_cols=329 Identities=14% Similarity=0.102 Sum_probs=188.2
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH
Q 010897 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (498)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~ 171 (498)
.....+..+.+++.+.++......+...+++|+|+++|+.+++.++.... +-..+++|+++.|+|..+...+
T Consensus 130 ~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~--------ll~pGD~Vlv~~P~y~~y~~~~ 201 (521)
T TIGR03801 130 MLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANE--------LLKKGDKIALMTPIFTPYLEIP 201 (521)
T ss_pred CHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhh--------cCCCCCEEEEeCCCcHHHHHHH
Confidence 33444444446777665432211111249999999999998887642210 0112579999999999999998
Q ss_pred HHc--CCeeEEEEecC-Cc-----cccCHHHHHHHhhhCCeEEEEeeccCCcccccC---HHHHHHHHHHhhcccCCCce
Q 010897 172 RYF--EVELKEVKLEE-GY-----YVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTP 240 (498)
Q Consensus 172 ~~~--g~~~~~v~~~~-~~-----~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~---l~~I~~la~~~~~~~~~~~~ 240 (498)
++. |++++.+++++ +. |++|+++|++++++++++|++++|+||||.+.+ +++|.++|++++. +++
T Consensus 202 ~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~----~l~ 277 (521)
T TIGR03801 202 ELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRP----DLM 277 (521)
T ss_pred HHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCC----CeE
Confidence 887 56666677653 22 889999999999889999999999999999976 6667788887522 899
Q ss_pred EEEecCcccccccccCCCCccccCCCCeeEEEEcCCcc-CCCCCCeEEEEEeCCCCC-------Ccccc--cccCc--cC
Q 010897 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDL-------PDELV--FHINY--LG 308 (498)
Q Consensus 241 l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~-l~~p~g~g~~~~~~~~~l-------~~~~~--~~~~y--l~ 308 (498)
|++|++|+.+..++. ... ...-+++ .+..|..|. +++++++||++..+...+ +.... ....| +.
T Consensus 278 II~DEvY~~f~~~~~--sl~-~~~~~~v-I~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~ 353 (521)
T TIGR03801 278 ILTDDVYGTFVDDFR--SLF-AELPYNT-IGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLT 353 (521)
T ss_pred EEECCCchhhccccc--chh-hhCCCCE-EEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhcccc
Confidence 999999998753221 110 0111233 344566675 478999999986543110 00000 00000 00
Q ss_pred C-------------CCCCccc---cCCCchHHH-HHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 309 S-------------DQPTFTL---NFSKGSSQI-IAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 309 ~-------------~~~~~~l---~~sr~~~~~-~a~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
. +...... .|.....+. .++.++...+ +.....+..+.+.++++.+.+.| + +.+...
T Consensus 354 ~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L---g-~~~~~~ 429 (521)
T TIGR03801 354 TEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL---G-LPLQED 429 (521)
T ss_pred CChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc---C-CCCcCC
Confidence 0 0000000 011111111 1111222333 23334555666667777778777 2 332221
Q ss_pred CCCccEEE-EEecCCC--------------CCCHHHHHHHHHhc-CcEeeeec-CCCCCCCeeEEEEeecCCCCHHHHHH
Q 010897 370 DVGVPLVA-FSLKDSS--------------AHTVFEISEGLRKF-GWIVPAYT-MPANAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 370 ~~~~~~v~-f~~~~~~--------------~~~~~~l~~~L~~~-G~~v~~~~-~~~~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
++...+.+ +++..-. ..+..+++.+|.++ |+.+.... +. .....+|+|+. ..+.++..+
T Consensus 430 ~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg---~~~~~vRisla-~l~~~~~~~ 505 (521)
T TIGR03801 430 PNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFG---GPEWSVRVSLA-NLNEYDYAE 505 (521)
T ss_pred CCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcC---CCCCeEEEEec-CCCHHHHHH
Confidence 22344444 3554210 12567888887755 77653222 21 11346999984 346666776
Q ss_pred HHHHHHHHHHHH
Q 010897 433 LISHIEEVLKEI 444 (498)
Q Consensus 433 l~~~l~~~l~~l 444 (498)
..+.|++++++.
T Consensus 506 ~~~rl~~~~~~~ 517 (521)
T TIGR03801 506 IGRAIRKILDEY 517 (521)
T ss_pred HHHHHHHHHHHH
Confidence 677777666543
No 224
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.6e-18 Score=167.01 Aligned_cols=360 Identities=17% Similarity=0.194 Sum_probs=239.6
Q ss_pred HHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHHHHHhccCC-------CCCcCCcchHHHHHHHHHHHHHHcCCCC
Q 010897 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY-------VDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (498)
Q Consensus 40 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~n~-------~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (498)
.++++.+++....+. ..++|-.--. ..++.+.+++-+.+..-+ -+|..-....++|..+.+...+|||.+.
T Consensus 12 ~~i~~~i~~e~~rq~-~~ieLIASEN-~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~ 89 (413)
T COG0112 12 PEIFEAIQQELERQR-EHIELIASEN-FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY 89 (413)
T ss_pred HHHHHHHHHHHHHHh-hceeeeeccc-cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc
Confidence 456666655543221 2222222111 345777776654443211 1333444678999999999999999974
Q ss_pred CCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC---CchhHHHHHHHHcCC--eeEEEEecCCc
Q 010897 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA---NVQVCWEKFARYFEV--ELKEVKLEEGY 187 (498)
Q Consensus 113 ~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~---~~h~~~~~~~~~~g~--~~~~v~~~~~~ 187 (498)
.-+-..+|+.||+.+..++.++ ++.|+--+ -.|.+...-....|. ++...++++++
T Consensus 90 ------anVQPhSGs~AN~av~~All~p-------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et 150 (413)
T COG0112 90 ------ANVQPHSGSQANQAVYLALLQP-------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPET 150 (413)
T ss_pred ------cccCCCCchHHHHHHHHHHcCC-------------CCeEecccCCCCCcccCCCCCCccceeEEeEeccccccc
Confidence 2445557899998888887664 45676433 444444433333443 45666677667
Q ss_pred cccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCc-ccccccccCCCCccccCC
Q 010897 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGFIAPFLYPDLEWDFRL 265 (498)
Q Consensus 188 ~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~-~g~~~~~~~~~~~~~~~~ 265 (498)
+.+|.|++++.+.+ +|++|+ .|.+..-..-|++++.++|++. |.++.+|.|| +|.++.-..|. -+
T Consensus 151 ~~IDyD~~~k~a~e~kPK~ii--~G~SaY~r~id~~~~reIad~V------GA~L~~DmAHiaGLVA~G~~p~-----P~ 217 (413)
T COG0112 151 GLIDYDEVEKLAKEVKPKLII--AGGSAYSRPIDFKRFREIADEV------GAYLMVDMAHVAGLIAGGVHPN-----PL 217 (413)
T ss_pred CccCHHHHHHHHHHhCCCEEE--ECccccccccCHHHHHHHHHHh------CceEEehHHHHHHHHhcccCCC-----CC
Confidence 89999999988875 688664 3444445667899999999999 9999999999 45443222221 23
Q ss_pred CCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHH
Q 010897 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIME 345 (498)
Q Consensus 266 ~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~ 345 (498)
+.+|+++.+.||.+.+|.| |++++++.+.. +. ++...+ ..++|......+.+...++......+|++..+
T Consensus 218 ~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~-kk--in~aVF------Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~ 287 (413)
T COG0112 218 PHADVVTTTTHKTLRGPRG-GIILTNDEELA-KK--INSAVF------PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAK 287 (413)
T ss_pred CccceEeCCcccCCCCCCc-eEEEeccHHHH-HH--hhhhcC------CccCCChHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 5699999999999988876 77776663321 11 111111 11223333345666677777777788999999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC---CCCeeEEEEeec
Q 010897 346 NCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN---AENVAVLRVVVR 422 (498)
Q Consensus 346 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~---~~~~~~lRv~v~ 422 (498)
+..++++.|.+.|.+.| +.+++......++.+.+. +.+.+..+..+.|.+-||.+-.-..|.+ .....-||+.+-
T Consensus 288 qVv~NAkaLAe~l~~~G-~~vvsGgTdnHl~lVDl~-~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtp 365 (413)
T COG0112 288 QVVKNAKALAEALKERG-FKVVSGGTDNHLVLVDLR-SKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTP 365 (413)
T ss_pred HHHHHHHHHHHHHHHcC-CeEecCCccceEEEEEcc-cCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccH
Confidence 99999999999999987 999987656788888886 3367888888999999998865555543 233456898863
Q ss_pred C----CCCHHHHHHHHHHHHHHHHHHH
Q 010897 423 E----DFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 423 ~----~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
. .+.++|++++.+-|.+++...+
T Consensus 366 a~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 366 AVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 3 3455778777777777776654
No 225
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.83 E-value=8.2e-18 Score=174.69 Aligned_cols=334 Identities=15% Similarity=0.040 Sum_probs=225.8
Q ss_pred ChHHHHHHHHHHhcc---C-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINK---N-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~---n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
+.....+.+...+.. . ...+....+...+++.+.+++....|+....+ .+++|+|+.+|+.+++..+.++
T Consensus 105 p~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~---~IiiT~G~q~al~l~~~~l~~p--- 178 (459)
T COG1167 105 PLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPE---QIVITSGAQQALDLLLRLLLDP--- 178 (459)
T ss_pred CHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC---eEEEeCCHHHHHHHHHHHhCCC---
Confidence 334566666666543 2 23444556888999999999987788876432 4999999999999888887553
Q ss_pred HHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEE-eeccCCcccccCH
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAA-ILGSTLTGEFEDV 221 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~-~~~~t~tG~~~~l 221 (498)
++.|++.+++|.....+.+.+|++++.||+|++ .||+++|++.+.. +++++++ -...||||...+.
T Consensus 179 ----------Gd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~--G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~ 246 (459)
T COG1167 179 ----------GDTVLVEDPTYPGALQALEALGARVIPVPVDED--GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSL 246 (459)
T ss_pred ----------CCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC--CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCH
Confidence 579999999999999999999999999999865 4999999999976 4666554 4578999999776
Q ss_pred H---HHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 222 K---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 222 ~---~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
+ +|.++|++| |+||+.|..|+.+.. ..+... ..+..++-..+..|+.|.+.+..++||++.... .+
T Consensus 247 ~rR~~Ll~lA~~~------~~~IIEDD~y~el~~--~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~ 317 (459)
T COG1167 247 ERRKALLALAEKY------DVLIIEDDYYGELRY--DGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LI 317 (459)
T ss_pred HHHHHHHHHHHHc------CCeEEeeCcchhhhc--CCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HH
Confidence 4 699999999 999999999998752 212221 112234566778899999999999999985432 11
Q ss_pred CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHH----HHHHHHHHHHHHHHHhcCCC-eEEeeCCC
Q 010897 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI----MENCMGNARALREGLEKTGR-FEILSKDV 371 (498)
Q Consensus 297 ~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~----~~~~~~~a~~l~~~L~~~~~-~~~~~~~~ 371 (498)
+.+....... +. ....+.|.+....+....|.++ .....+.++.+.+.|++..+ ...+..+.
T Consensus 318 -~~~~~~k~~~-----------~~-~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~ 384 (459)
T COG1167 318 -EKLLRLKQAA-----------DL-GPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPE 384 (459)
T ss_pred -HHHHHHHHHh-----------cC-CCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCC
Confidence 1110000000 00 0122222222222321124444 44444577778888888642 23333333
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCcEeee-e-cCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 372 GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPA-Y-TMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~-~-~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.-++..++++ ++|..++.+++.++|+.+.. . .+.......+.+|+++... +.+++++.++.|.+++.+.
T Consensus 385 gG~flwl~l~~--~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 385 GGLFLWLELPE--GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ceEEEEEEcCC--CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHH
Confidence 44455557744 57889999999999988744 2 2222222456899999654 6788887777777777654
No 226
>PRK08354 putative aminotransferase; Provisional
Probab=99.83 E-value=1e-17 Score=166.27 Aligned_cols=284 Identities=18% Similarity=0.167 Sum_probs=175.7
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
++.+.+++.++++... .||... .+++++++.+|.. +++|+|+++++.+.+..+. +
T Consensus 22 p~~~~~a~~~~~~~~~----~yp~~~----~l~~~ia~~~~~~--------I~vt~G~~~al~~~~~~~~-~-------- 76 (311)
T PRK08354 22 PEWLDEMFERAKEISG----RYTYYE----WLEEEFSKLFGEP--------IVITAGITEALYLIGILAL-R-------- 76 (311)
T ss_pred CHHHHHHHHHHHHHhh----cCCChH----HHHHHHHHHHCCC--------EEECCCHHHHHHHHHHhhC-C--------
Confidence 4677888877765422 233333 3556788888742 8999999999876654331 1
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCH---HHHH
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDV---KLLH 225 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l---~~I~ 225 (498)
+++|++++++|..+..+++..|++++.++ +|++.|++.++ +++.+++++|+||||.+.+. ++|.
T Consensus 77 -----gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~ 143 (311)
T PRK08354 77 -----DRKVIIPRHTYGEYERVARFFAARIIKGP-------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLL 143 (311)
T ss_pred -----CCeEEEeCCCcHHHHHHHHHcCCEEeecC-------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHH
Confidence 46899999999999999999999986543 67889988877 46789999999999999765 5566
Q ss_pred HHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCccccccc
Q 010897 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHI 304 (498)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~ 304 (498)
++|+++ ++++++|++|++|... ... ...+++ .+..|..|.+ +++.++||++. +.+.+..
T Consensus 144 ~~a~~~------~~~li~De~y~~f~~~---~~~---~~~~~v-i~~~S~SK~~~l~GlRiG~~v~-----~~~~l~~-- 203 (311)
T PRK08354 144 DAVEDR------NALLILDEAFIDFVKK---PES---PEGENI-IKLRTFTKSYGLPGIRVGYVKG-----FEEAFRS-- 203 (311)
T ss_pred HHhhhc------CcEEEEeCcchhcccc---ccc---cCCCcE-EEEeccHhhcCCccceeeeeee-----hHHHHHH--
Confidence 677788 9999999999987521 110 112333 3445667766 48899999985 1111110
Q ss_pred CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCC
Q 010897 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS 384 (498)
Q Consensus 305 ~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (498)
....+. - ..+.+.+ +..+..+++.... ++.+++.+..+.+.++... ++ ..+++.+.+.
T Consensus 204 -----~~~~~~----~---~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~-~~-~~~~~~~~~~--- 261 (311)
T PRK08354 204 -----VRMPWS----I---GSTGYAF-LEFLIEDDFEHLR----KTMPLIWREKERFEKALYV-KS-DANFFIKDVG--- 261 (311)
T ss_pred -----cCCCcc----C---CHHHHHH-HHHHHHhHHHHHH----HHHHHHHHHHHHHHHhcCC-CC-CCcEEEEECC---
Confidence 000111 1 1111211 1112122232211 2222222222222111111 22 4666666542
Q ss_pred CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 385 AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 385 ~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+..++++.|.++|+.+....... ..+++|++++ +.++.++|++.|+.+
T Consensus 262 --~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 --DAEKFVEFLKRNGILVRDCTSFG---LPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred --CHHHHHHHHHHCCeEEEecccCC---CCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 45689999999998886544321 1368999998 567788888887764
No 227
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.83 E-value=1.2e-17 Score=172.28 Aligned_cols=313 Identities=13% Similarity=0.017 Sum_probs=200.1
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
++.+.+++++|.+. .+++++|++|+.+++.++...+... .+.+ .+++||+++++|.++..++...|+++
T Consensus 67 ~fe~~lA~~~g~~~-------~v~~~sGt~al~~aL~al~~~~~~~---~~~~-pGd~VIv~~~t~~a~~~~v~~~G~~p 135 (438)
T PRK15407 67 AFEKKLAEFLGVRY-------ALLVNSGSSANLLAFSALTSPKLGD---RALK-PGDEVITVAAGFPTTVNPIIQNGLVP 135 (438)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHhhccccc---cCCC-CCCEEEECCCCcHHHHHHHHHcCCEE
Confidence 34445888888864 8899999999999988764321100 0111 24689999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~ 258 (498)
+.++++.+++.+|+++++++++++|++|++++ ++|...++++|.++|+++ +++|++|+|++.+.. ....
T Consensus 136 v~vdvd~~~~~id~~~le~~i~~~tkaVi~~~---~~G~p~dl~~I~~la~~~------gi~vIeDaa~a~G~~--~~g~ 204 (438)
T PRK15407 136 VFVDVELPTYNIDASLLEAAVSPKTKAIMIAH---TLGNPFDLAAVKAFCDKH------NLWLIEDNCDALGST--YDGR 204 (438)
T ss_pred EEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC---CCCChhhHHHHHHHHHHC------CCEEEEECccchhhh--cCCe
Confidence 99999865689999999999999999988776 367888999999999999 999999999987652 2111
Q ss_pred CccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCC--------------------------CC-
Q 010897 259 LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS--------------------------DQ- 311 (498)
Q Consensus 259 ~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~--------------------------~~- 311 (498)
....+ ..+-++++...|.+.++.| |++++++++.. +......++-.. ..
T Consensus 205 ~~G~~--gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (438)
T PRK15407 205 MTGTF--GDIATLSFYPAHHITMGEG-GAVFTNDPLLK-KIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHK 280 (438)
T ss_pred eeecc--CceEEEeCCCCCCccccCc-eEEEECCHHHH-HHHHHHHHhCccccccccccccccccccccccccccccccc
Confidence 11111 2244556666677766665 88888776432 111100010000 00
Q ss_pred ---CCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEeeCCC--Ccc--EEEEEecCC
Q 010897 312 ---PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-FEILSKDV--GVP--LVAFSLKDS 383 (498)
Q Consensus 312 ---~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~--~~~--~v~f~~~~~ 383 (498)
...++++. +-.+.+++....-+.+.+++++.+++++++.+.|..+++ +.+...+. ..+ .+.+.+.+.
T Consensus 281 ~~~~~~G~n~r-----msel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 355 (438)
T PRK15407 281 YTYSHLGYNLK-----ITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKED 355 (438)
T ss_pred ccccccccccC-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCc
Confidence 00111111 122223333333355678888899999999999988764 32222111 122 333444333
Q ss_pred CCCCHHHHHHHHHhcCcEeeeecC-CCCC-----------C---------CeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 384 SAHTVFEISEGLRKFGWIVPAYTM-PANA-----------E---------NVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 384 ~~~~~~~l~~~L~~~G~~v~~~~~-~~~~-----------~---------~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+.+..++.+.|.++||....+.. |... . ....+-+=++...|.++++++++.|+++++
T Consensus 356 ~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 356 AGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 345678999999999986543221 1000 0 012334444556788999999999988774
No 228
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.83 E-value=2.7e-18 Score=171.75 Aligned_cols=271 Identities=16% Similarity=0.045 Sum_probs=178.7
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
.+++.+++.+|.+. +++|+|+++++.+++.. . .+++|++++++|..+...++.+|+++
T Consensus 53 ~Lr~~ia~~~~~~~-------I~it~Gs~~al~~~~~~--~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 53 GLEAAARAYYGAPQ-------LLPVAGSQAAIQALPRL--R-------------APGRVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred HHHHHHHHHhCCCC-------EEECcCHHHHHHHHHHc--c-------------CCCEEEEcCCChHHHHHHHHHcCCeE
Confidence 55666888888642 99999999998776432 1 14689999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHH---HHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKL---LHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~---I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
+.||++ ++++.++ +++++++++|+||||.+.+.++ |.++|+++ +++|++|++|..+.. .
T Consensus 111 ~~v~~~---------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~------~~~iI~DE~y~~~~~-~- 172 (330)
T PRK05664 111 RELDEA---------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR------GGWLVVDEAFMDNTP-Q- 172 (330)
T ss_pred EEechh---------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc------CCEEEEECCcccCCC-c-
Confidence 998863 3444453 6788999999999999977555 55556788 999999999986531 1
Q ss_pred CCCCccccCCCCeeEEEEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH
Q 010897 256 YPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 256 ~~~~~~~~~~~~~dsi~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~ 334 (498)
+........+++ .+.-+..|.+ +++.++||++.. ++.. +.+.. + ...+. ...+.+.++...
T Consensus 173 -~s~~~~~~~~~v-i~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~---~----~~~~~-------~~~~~~~~~~~~ 234 (330)
T PRK05664 173 -HSLAACAHRPGL-IVLRSFGKFFGLAGARLGFVLAE-PALL-RALAE---L----LGPWT-------VSGPTRWLAQAA 234 (330)
T ss_pred -ccccccccCCCE-EEEeeccccccCCCcceEEEEeC-HHHH-HHHHH---h----cCCCC-------CCHHHHHHHHHH
Confidence 111101122344 3455666655 599999999863 2222 21110 0 00111 112334444444
Q ss_pred hcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 335 LGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 335 lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
+.. +..+...+...+.++++.+.|++.+ ++.. +...+++.++.+ +..++.+.|.++|+.+..+. .
T Consensus 235 L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~--~~~~~f~~~~~~-----~~~~~~~~l~~~gi~v~~f~------~ 300 (330)
T PRK05664 235 LADTPWQRRQRERLLAASQRLAALLRRHG-LTPA--GGCALFQWVRTE-----DAAALHEFLARRGILTRLFE------Q 300 (330)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cccc--CCcceEEEEecC-----CHHHHHHHHHHCCeEEEECC------C
Confidence 432 2345566677778899999999885 5422 212345555542 46789999999999986532 2
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..++|++++. +.+++++|.+.|+.+.++
T Consensus 301 ~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 301 PASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred CCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 3579999874 567788888888776543
No 229
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=8.1e-19 Score=177.72 Aligned_cols=283 Identities=18% Similarity=0.147 Sum_probs=188.3
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
++.+.++++.|.+. .+.++||++|+.+++ .+... +++|+++++.|.. +...++.+
T Consensus 56 ~le~~la~l~g~~~-------~~~~~sG~~ai~~~~-~ll~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 56 VLEQAIADLEGGDQ-------GFACSSGMAAIQLVM-SLFRS-------------GDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHH-HHhCC-------------CCEEEEecCCcCcHHHHHHHHhhcc
Confidence 44555999999975 678888898887654 33221 4689999887764 45556678
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++++++|++|++++|+||+|...++++|.++|+++ ++++++|++|+....
T Consensus 115 G~~v~~vd~------~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~------g~~lIvD~t~~~~~~-- 180 (366)
T PRK08247 115 NVRFVYVNT------ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKH------GLLLIVDNTFYTPVL-- 180 (366)
T ss_pred CceEEEECC------CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 999888864 378999999999999999999999999999999999999999 999999999965431
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..| . . .++|++..|.+|++.++.+ .|+++.++++.. ..+.....+.+. . .....+|.++
T Consensus 181 ~~p-~--~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~g~----------~--~s~~~a~l~~ 241 (366)
T PRK08247 181 QRP-L--E---EGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAAGA----------V--LSPFDSWLLI 241 (366)
T ss_pred cCc-h--h---cCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhcCC----------C--CChHHHHHHH
Confidence 111 1 1 2578999999999987655 466665433221 111111111111 0 1123455555
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHh----------cCcEe
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK----------FGWIV 402 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~----------~G~~v 402 (498)
+.+ +.+..++++..++++.+.+.|++.|++..+..|...++++|.+++ .....++.+.|.- +..++
T Consensus 242 ~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~--~~~~~~~~~~l~~~~~~~slg~~~sl~~ 317 (366)
T PRK08247 242 RGM--KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD--EEWVNPFLKSLKLITFAESLGGVESFIT 317 (366)
T ss_pred hcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC--HHHHHHHHHcCCcceEccCCCCCceEEE
Confidence 543 356677888899999999999999887744333357899998742 1112234443331 11111
Q ss_pred -eeecC----CC-----CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 403 -PAYTM----PA-----NAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 403 -~~~~~----~~-----~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
++.+. +. .....+.+|++++- |+.+.|++||+++++.
T Consensus 318 ~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 318 YPATQTHADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 11110 00 01124689999974 7888899999999875
No 230
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.1e-17 Score=172.15 Aligned_cols=303 Identities=15% Similarity=0.165 Sum_probs=197.8
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh----
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV---- 165 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~---- 165 (498)
.|....+|+ .++++.|.+. .+++++|+.|+..++.++..+ +++|+++.+.|.
T Consensus 63 ~p~~~~Le~----~lA~leg~~~-------al~~~sG~~Ai~~al~~ll~~-------------GD~Vlv~~~~y~~t~~ 118 (431)
T PRK08248 63 NPTTDVFEK----RIAALEGGIG-------ALAVSSGQAAITYSILNIASA-------------GDEIVSSSSLYGGTYN 118 (431)
T ss_pred CchHHHHHH----HHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCchhhHHH
Confidence 344445554 4899999754 889999999998888776432 468999997765
Q ss_pred HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
.+...++..|++++.+++ .|+++++++++++|++|++++++||||.+.|+++|.++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gv~v~~vd~------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~------gi~vIvD~ 186 (431)
T PRK08248 119 LFAHTLPKLGITVKFVDP------SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEH------GIPLIVDN 186 (431)
T ss_pred HHHHHHHhCCEEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEeC
Confidence 345567788999988875 378999999999999999999999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCC-CeEEEEEeCCCCC-Ccc-----cc-cccCccCC---CC---
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDL-PDE-----LV-FHINYLGS---DQ--- 311 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~-g~g~~~~~~~~~l-~~~-----~~-~~~~yl~~---~~--- 311 (498)
+++... ..... ..++|.+..|.|||++++. .+|.+++.+.+.. ... +. .+..|... ..
T Consensus 187 t~a~~~---~~~pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (431)
T PRK08248 187 TFASPY---LLRPI-----EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGE 258 (431)
T ss_pred CCCccc---cCChh-----HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhch
Confidence 987432 21111 1368999999999997765 3677776543211 000 00 00000000 00
Q ss_pred CC---------ccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC-----------
Q 010897 312 PT---------FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD----------- 370 (498)
Q Consensus 312 ~~---------~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------- 370 (498)
.. ...-|.. ......| +...|-+.+..++++..+++.++.+.|+++|.+. +..+.
T Consensus 259 ~~~~~~~~~~~~~~~G~~--l~p~~a~--l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 334 (431)
T PRK08248 259 AAYITKARVQLLRDLGAA--LSPFNSF--LLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAK 334 (431)
T ss_pred hhHHHHHHHHHHHhcCCC--CCHHHHH--HHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHH
Confidence 00 0000111 1112222 3344566778999999999999999999999765 33221
Q ss_pred ----C-CccEEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCC
Q 010897 371 ----V-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDF 425 (498)
Q Consensus 371 ----~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~ 425 (498)
. ..++++|.+++. .....++.+.|.--...++ + .+.|.. .-..+.+|+||+-
T Consensus 335 ~~~~~g~gg~~sf~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-- 411 (431)
T PRK08248 335 KYLPKGQGAILTFGIKGG-VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT-- 411 (431)
T ss_pred HhCcCCCceEEEEEecCC-HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc--
Confidence 0 245899998542 1123455555542211100 0 011110 1124689999984
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 010897 426 SRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 426 t~~~~~~l~~~l~~~l~~l~ 445 (498)
|+.+.|++||+++++.++
T Consensus 412 --Ed~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 412 --EAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred --CCHHHHHHHHHHHHHhhh
Confidence 788889999999998654
No 231
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.83 E-value=3.5e-18 Score=174.87 Aligned_cols=289 Identities=16% Similarity=0.124 Sum_probs=188.2
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
++.+.+++++|.+. .+.+++|+.|+.+++.++..+ +++|+++.+.|.. +...++..
T Consensus 69 ~le~~lA~l~g~~~-------~i~~~sG~~Al~~~l~~ll~~-------------Gd~Viv~~~~y~~t~~~~~~~~~~~ 128 (403)
T PRK07503 69 LLEQRMASLEGGEA-------AVALASGMGAITATLWTLLRP-------------GDEVIVDQTLYGCTFAFLHHGLGEF 128 (403)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEccCccchHHHHHHHHHhhC
Confidence 34445999999864 677778889988887665322 4689999887753 44556678
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++++ |+++++++++++|++|++.+++||+|.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 129 G~~v~~vd~~------d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~------gi~lIvD~a~a~~~--- 193 (403)
T PRK07503 129 GVTVRHVDLT------DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGA------GAKVVVDNTYCTPY--- 193 (403)
T ss_pred CEEEEEeCCC------CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCcccc---
Confidence 9988888752 78999999999999999999999999999999999999999 99999999998643
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..... . .++|++..|.+||++++.+ .|+++ .+++.. ..+.. ... .... +.. ...+.+|..+
T Consensus 194 ~~~~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~-~~l~~----~~~-~~~~---g~~--~s~~~a~l~l 256 (403)
T PRK07503 194 LQRPL----E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALA-DRIRL----EGL-KDMT---GAV--MSPFDAFLLM 256 (403)
T ss_pred cCCch----h-hCCCEEEccccccccCCCceeEEEEE-cCHHHH-HHHHh----hhH-HhCc---CCC--CCHHHHHHHH
Confidence 11111 1 2578899999999987543 56665 544322 11110 000 0000 111 1223344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-eCC-----C----------CccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SKD-----V----------GVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~-----~----------~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
+ +.+.+..++++..++++.+.+.|++.|.++.+ .+. . ..++++|.+++. ......+.+.|.
T Consensus 257 ~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~~~~~~~~l~ 333 (403)
T PRK07503 257 R--GLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG-IAAGRRFMNALQ 333 (403)
T ss_pred c--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC-HHHHHHHHHhCC
Confidence 3 33556778888889999999999998866532 211 0 245888888531 111234444443
Q ss_pred h--cCcEeee----ecCCC---C-----------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 397 K--FGWIVPA----YTMPA---N-----------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 397 ~--~G~~v~~----~~~~~---~-----------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
- .+..+.. .+.|. . .-..+.+|+||+- |+.+.|++||+++++....
T Consensus 334 l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~Al~~~~~ 399 (403)
T PRK07503 334 LFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL----EDVADILADLAQALDACAV 399 (403)
T ss_pred cceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec----CCHHHHHHHHHHHHHHHHH
Confidence 2 1111100 00010 0 0113689999984 7888899999999986544
No 232
>PLN02509 cystathionine beta-lyase
Probab=99.82 E-value=4.7e-18 Score=175.10 Aligned_cols=285 Identities=15% Similarity=0.115 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH----H
Q 010897 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (498)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~----~ 171 (498)
..+++.++++++.|.+. .+.+++|+.|+.+ +..+.+ .+++||++++.|..+... +
T Consensus 134 t~~aLE~~lA~leg~e~-------ai~~~SG~aAi~~-il~ll~-------------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSA-VTHLIK-------------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE-------EEEeCcHHHHHHH-HHHHhC-------------CCCEEEEcCCchhhHHHHHHHHH
Confidence 45677788999988653 6677777777643 333322 147999999999887643 4
Q ss_pred HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccc
Q 010897 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (498)
Q Consensus 172 ~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~ 251 (498)
...|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |++++||++++.++
T Consensus 193 ~~~G~~v~~vd~------~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~------g~~lIVD~A~a~~~ 260 (464)
T PLN02509 193 PRSGVVVKRVNT------TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_pred HHCCeEEEEeCC------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCccccc
Confidence 567888887753 478999999999999999999999999999999999999999 99999999997654
Q ss_pred ccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHH
Q 010897 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (498)
Q Consensus 252 ~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~ 329 (498)
. ..+ .. .++|++..|.+||+.++.+ .|+++++++... ..+....... ++. ......|
T Consensus 261 ~--~~p-----l~-~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~-~~~~~~~~~~----------g~~--l~p~~A~ 319 (464)
T PLN02509 261 L--SRP-----LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYFLQNSE----------GSG--LAPFDCW 319 (464)
T ss_pred c--CCh-----hh-cCCcEEEecCcccccCCCccceeEEEeccHHHH-HHHHHHHHhc----------CCC--cCHHHHH
Confidence 2 111 11 2589999999999988777 677776554321 1111000001 111 1122233
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHH
Q 010897 330 YQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISE 393 (498)
Q Consensus 330 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~ 393 (498)
..+ .+-+.+..++++..++++++.+.|++.|.++ +..+. ...++++|.+ +. .....++.+
T Consensus 320 l~l--r~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~-~~~~~~f~~ 395 (464)
T PLN02509 320 LCL--RGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GS-VALSKHLVE 395 (464)
T ss_pred HHH--hhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CC-HHHHHHHHH
Confidence 333 3445667899999999999999999999764 43321 0246899988 31 112345555
Q ss_pred HHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 394 GLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 394 ~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.|.--.+..+ + ...|.. .-..+.+|+||+- |+.+.|++||+++++
T Consensus 396 ~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 396 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred cCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 5542111000 0 000110 1124689999984 688888999998875
No 233
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=4.1e-18 Score=173.25 Aligned_cols=288 Identities=18% Similarity=0.121 Sum_probs=191.2
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|...++|++ +++++|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|.+....
T Consensus 53 p~~~~lE~~----lA~l~g~~~-------~l~~~sG~~Ai~~~l~~ll~~-------------GD~Vlv~~~~y~~~~~~ 108 (385)
T PRK08574 53 PTLRPLEEA----LAKLEGGVD-------ALAFNSGMAAISTLFFSLLKA-------------GDRVVLPMEAYGTTLRL 108 (385)
T ss_pred ccHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHH
Confidence 455555554 889999754 778889999998888766432 47899999999987766
Q ss_pred HH---HcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 171 AR---YFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 171 ~~---~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
++ ..|++++.+. +|++++++++++ +|++|++..++||+|.+.|+++|.++|+++ |+++++|++
T Consensus 109 ~~~~~~~g~~v~~~~-------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~------gi~livD~t 175 (385)
T PRK08574 109 LKSLEKFGVKVVLAY-------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKEL------GAILVVDNT 175 (385)
T ss_pred HHHhhccCcEEEEEC-------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECC
Confidence 54 3466665542 468899999988 899999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
++.+.. ..+ +. .++|++..|.+||+.++.+ .|++++++++.. ..+.....+++ .. ..
T Consensus 176 ~a~~~~--~~~-l~-----~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~-~~~~~~~~~~g----------~~--~~ 234 (385)
T PRK08574 176 FATPLL--YRP-LR-----HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFL-EELWEWRRRLG----------TI--MQ 234 (385)
T ss_pred CCcccc--CCh-hh-----hCCcEEEeeCceeecCCCCceeEEEEECcHHHH-HHHHHHHHhcC----------CC--CC
Confidence 976431 111 11 2579999999999987765 366666654322 11111111111 11 11
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC-----------------CCccEEEEEecCCCCC
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD-----------------VGVPLVAFSLKDSSAH 386 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~-----------------~~~~~v~f~~~~~~~~ 386 (498)
.+..|.+++ +.+.+..++++..+++.++.+.|++.|.+. |..+. ...++++|.+++. ..
T Consensus 235 p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~-~~ 311 (385)
T PRK08574 235 PFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG-RD 311 (385)
T ss_pred HHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC-HH
Confidence 122333333 445577889999999999999999988764 33221 0245889999631 12
Q ss_pred CHHHHHHHHHhcC--cEeee----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 387 TVFEISEGLRKFG--WIVPA----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 387 ~~~~l~~~L~~~G--~~v~~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
...++.+.|.--. ..+-. .+.|.. .-..+.+|+||+- |+.+.|++||+++++.
T Consensus 312 ~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 312 AVLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred HHHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 2345555553221 11000 000110 1114689999984 6788889999988864
No 234
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.82 E-value=1.5e-18 Score=174.19 Aligned_cols=312 Identities=13% Similarity=0.067 Sum_probs=212.4
Q ss_pred cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh-H
Q 010897 88 DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV-C 166 (498)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~-~ 166 (498)
..++...++-+++.+.|.++++.|.+. ....++.+||.++-.++..+..+ .+..+++.. .+. .
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~~---~v~~l~GsGT~a~Eaa~~nl~~~------------~g~~vLv~g-~FG~r 95 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPADY---LIGIVPASDTGAVEMALWSMLGC------------RGVDVLAWE-SFGKG 95 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCchHHHHHHHHHHcCCC------------CCCeEEEEC-HHHHH
Confidence 346788888899999999999986421 23566778888876666655321 134566544 333 4
Q ss_pred HH-HHHHHcCCe-eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 167 WE-KFARYFEVE-LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 167 ~~-~~~~~~g~~-~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
|. +.|+..|++ +..+....+ -.+|+++++. + ..|++++..|+||...|+++|... .+ +++++||
T Consensus 96 ~~~eia~~~g~~~v~~l~~~~g-~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~--~~------~~lliVD 161 (374)
T TIGR01365 96 WVTDVTKQLKLPDVRVLEAEYG-KLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPA--DR------EGLTICD 161 (374)
T ss_pred HHHHHHHhcCCCCcEEEcCCCC-CCCCHHHcCC--C---CCEEEecCCCchheeccccccccc--cC------CCcEEEE
Confidence 45 888999994 888876654 4689998873 2 226799999999999999766532 15 7899999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcc-cc--cc-cCccCCCC--------C
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE-LV--FH-INYLGSDQ--------P 312 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~-~~--~~-~~yl~~~~--------~ 312 (498)
+.++.+..|+ + .+++|++..+++|++++|+|+++++++++..-... .. ++ +.|+.... .
T Consensus 162 avSs~g~~~l-------~--~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 232 (374)
T TIGR01365 162 ATSAAFAQDL-------D--YHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIF 232 (374)
T ss_pred ccchhcCCCC-------C--hhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhh
Confidence 9998766544 2 22599999999999999999999998875431100 00 00 01221100 0
Q ss_pred CccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC-C-C-CccEEEEEecCCCCC--
Q 010897 313 TFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSK-D-V-GVPLVAFSLKDSSAH-- 386 (498)
Q Consensus 313 ~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~-~-~~~~v~f~~~~~~~~-- 386 (498)
.....+|.+...+.++..+++.+..+ |++++.+++.++++.+++.++++|.++++.. + . +..++++.++++ +.
T Consensus 233 ~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~-~~~~ 311 (374)
T TIGR01365 233 EGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDP-AIDA 311 (374)
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCc-cccc
Confidence 01122344333444444445545565 7999999999999999999999986777753 2 1 344667777432 12
Q ss_pred ---C-----HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 387 ---T-----VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 387 ---~-----~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
| ..++.+.|.++|+.+.....+ .....+||.....++.++++.|++.|.-+..
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~---~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 312 LDEDAQADFAKELISTLEKEGVAYDIGSYR---DAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cccchhhHHHHHHHHHHHHCCEEEeccccc---cCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 2 578999999999877433222 2246799999999999999999999887764
No 235
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.82 E-value=1e-17 Score=173.06 Aligned_cols=341 Identities=14% Similarity=0.058 Sum_probs=209.6
Q ss_pred cCCCCCcccccc---cCC-ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV---TTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~---~~~-~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+++.++. ..+ .+|.+.+++.+.++........+ .......++.+.+++++|.+. ..+.+++||++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~-----~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGF-FYNEPAVELAELLLALTPEGL-----DKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcc-cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHH
Confidence 566555555421 122 56888888888886533222211 345667788888999998533 23899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-chhHHHHHHHHcC------------CeeEEEEecCC-----cccc
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG-----YYVM 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~-~h~~~~~~~~~~g------------~~~~~v~~~~~-----~~~~ 190 (498)
|+..++..++... +++.|++.+. .|.+........+ .++..+|.++. .+..
T Consensus 108 a~~~al~~~~~~~-----------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 108 AVEAALKLARAYT-----------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred HHHHHHHHHHHHc-----------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 9999998876420 1346666554 5554444433332 23556665421 2455
Q ss_pred CHHHHHHHhhh---CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-
Q 010897 191 NPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD- 262 (498)
Q Consensus 191 d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~- 262 (498)
|++.|++.++. ++.+|++...++++|.+.| +++|.++|+++ |+++++|++|+++.. .......+
T Consensus 177 d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~g~g~--~g~~~~~~~ 248 (413)
T cd00610 177 DLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH------GILLIADEVQTGFGR--TGKMFAFEH 248 (413)
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhhHhh
Confidence 89999999976 4556666656666698877 99999999999 999999999987521 11100111
Q ss_pred cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHH
Q 010897 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKN 342 (498)
Q Consensus 263 ~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~ 342 (498)
++. ..|.++++ |++.++.++|+++.+. +.. +.+ . ........+ ++.+.....++.++++.+.. .+
T Consensus 249 ~~~-~~d~~t~s--K~l~~g~~~g~~~~~~-~~~-~~~----~-~~~~~~~~t--~~~~~~~~~a~~a~l~~l~~---~~ 313 (413)
T cd00610 249 FGV-EPDIVTLG--KGLGGGLPLGAVLGRE-EIM-DAF----P-AGPGLHGGT--FGGNPLACAAALAVLEVLEE---EG 313 (413)
T ss_pred cCC-CCCeEEEc--ccccCccccEEEEEcH-HHH-Hhh----c-cCCCCCCCC--CCcCHHHHHHHHHHHHHHHh---cc
Confidence 111 23555444 8887778899987643 221 111 0 000000111 22223444556666666544 24
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-eEEeeC-CCCccEEEEEecCCC------CCCHHHHHHHHHhcCcEeeeecCCCCCCCe
Q 010897 343 IMENCMGNARALREGLEKTGR-FEILSK-DVGVPLVAFSLKDSS------AHTVFEISEGLRKFGWIVPAYTMPANAENV 414 (498)
Q Consensus 343 ~~~~~~~~a~~l~~~L~~~~~-~~~~~~-~~~~~~v~f~~~~~~------~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~ 414 (498)
..++..++.+++.+.|+++.. ..++.. .....++.+.+.+.. ..+...+.+.|.++|+.+.... .
T Consensus 314 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-------~ 386 (413)
T cd00610 314 LLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-------G 386 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-------C
Confidence 567777788888888876531 111111 124567777775321 1345789999999998864321 3
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 415 AVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 415 ~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.++|++++..+|.++++++++.|+++
T Consensus 387 ~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 387 NVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 56999998888999999998888765
No 236
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.82 E-value=1.5e-17 Score=169.31 Aligned_cols=327 Identities=13% Similarity=0.110 Sum_probs=202.0
Q ss_pred HHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 010897 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (498)
Q Consensus 70 ~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g 149 (498)
++..+.+.+++..+.... . ..+.+++.+++++++|.+. +++++||++|+.+++.++.-.
T Consensus 11 ~~~~~~~~~~l~~~~~~g-~----~~~~~~~e~~la~~~g~~~-------~v~~~sgt~al~~~l~~~~~~--------- 69 (375)
T PRK11706 11 GTELDYIQQAMSSGKLCG-D----GGFTRRCQQWLEQRFGSAK-------VLLTPSCTAALEMAALLLDIQ--------- 69 (375)
T ss_pred HHHHHHHHHHHHcCCccC-C----CHHHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhCCC---------
Confidence 334556666666654321 1 2344566677888888853 899999999988777654211
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHH
Q 010897 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (498)
Q Consensus 150 ~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~ 229 (498)
.+++|+++.++|.++..++...|++++.++++++++.+|+++++++++++|++|+++ +++|...|+++|.++|+
T Consensus 70 ---~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~ 143 (375)
T PRK11706 70 ---PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAK 143 (375)
T ss_pred ---CCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHH
Confidence 147999999999999999999999999999987778899999999999899988765 46899999999999999
Q ss_pred HhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCC--ccCCCCCCeEEEEEeCCCCCCcccccc----
Q 010897 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDDLPDELVFH---- 303 (498)
Q Consensus 230 ~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~h--K~l~~p~g~g~~~~~~~~~l~~~~~~~---- 303 (498)
++ ++++++|+||+.+.. + .... .+ ...|.-++|.| |.+.++.| |++++.+++...+.....
T Consensus 144 ~~------~i~vIeD~a~a~g~~-~-~~~~---~g-~~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~~~~~~~~~~~g~ 210 (375)
T PRK11706 144 KH------NLFVVEDAAQGVMST-Y-KGRA---LG-TIGHIGCFSFHETKNYTAGEG-GALLINDPALIERAEIIREKGT 210 (375)
T ss_pred Hc------CCEEEEECccccccc-c-CCee---ee-cCcCEEEEeCCCCccccccCC-eEEEECCHHHHHHHHHHHHcCC
Confidence 99 999999999987641 1 1110 01 01244445555 98866444 444455443221110000
Q ss_pred -c-CccCCCCCCc--cccCCCc-hHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCC----
Q 010897 304 -I-NYLGSDQPTF--TLNFSKG-SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDV---- 371 (498)
Q Consensus 304 -~-~yl~~~~~~~--~l~~sr~-~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~---- 371 (498)
. .+.......+ ..-|+.. ...+. +++.....+.+.+..++..++++++.+.|..++ .+.+...+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~---aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 287 (375)
T PRK11706 211 NRSQFFRGQVDKYTWVDIGSSYLPSELQ---AAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH 287 (375)
T ss_pred CcchhhccCCCcceeeecccccCcCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence 0 0000000000 0001111 01121 122111123366777888889999999998875 233221111
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCC-------------------CCeeEEEEeecCCCCHHHHHH
Q 010897 372 GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANA-------------------ENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~-------------------~~~~~lRv~v~~~~t~~~~~~ 432 (498)
...++.+.+++ ..+..++.+.|.++|+.++.+..|... .....+-+-++...+.++++.
T Consensus 288 ~~~~~~~~~~~--~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~ 365 (375)
T PRK11706 288 NAHMFYIKLRD--LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRT 365 (375)
T ss_pred eeEEEEEEECC--cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHH
Confidence 12244455532 357789999999999876433222110 012344555566678888888
Q ss_pred HHHHHHHHH
Q 010897 433 LISHIEEVL 441 (498)
Q Consensus 433 l~~~l~~~l 441 (498)
+++.|++++
T Consensus 366 i~~~i~~~~ 374 (375)
T PRK11706 366 VIDTILEFF 374 (375)
T ss_pred HHHHHHHHh
Confidence 887777653
No 237
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.2e-17 Score=171.47 Aligned_cols=299 Identities=17% Similarity=0.143 Sum_probs=190.2
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH----HHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~----~~~~~~ 174 (498)
.+.+.++++.|.+. .+.+++|+.|+.+++.++.. .+++||++...|.+.. ..+..+
T Consensus 73 ~le~~la~l~g~~~-------~v~fsSG~~Ai~~al~~ll~-------------~Gd~VI~~~~~y~~t~~~~~~~l~~~ 132 (437)
T PRK05613 73 ALENRIASLEGGVH-------AVAFASGQAAETAAILNLAG-------------AGDHIVTSPRLYGGTETLFLVTLNRL 132 (437)
T ss_pred HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhcC-------------CCCEEEECCCccHHHHHHHHHHHHhc
Confidence 45555999998853 67777777888777766532 1468999998888763 445778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++ +. .|+++++++++++|++|++..++|++|.+.|+++|.++|+++ |++++||++++.+..
T Consensus 133 Gi~v~~vd-~~----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~------gi~livD~t~a~g~~-- 199 (437)
T PRK05613 133 GIEVTFVE-NP----DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRN------QVPLIVDNTIATAAL-- 199 (437)
T ss_pred CeEEEEEC-CC----CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCeEEEECCCccccc--
Confidence 99999887 22 289999999999999999999999999999999999999999 999999999976532
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCC-CCCccccc--ccCccCCCCCC--------c--------
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKD-DLPDELVF--HINYLGSDQPT--------F-------- 314 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~-~l~~~~~~--~~~yl~~~~~~--------~-------- 314 (498)
..+ . + .++|+++.|+|||+.++ -++|.+++.+.. ........ ...++...... +
T Consensus 200 ~~p-~--~---~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T PRK05613 200 VRP-L--E---LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLK 273 (437)
T ss_pred cCh-H--H---hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHH
Confidence 111 1 1 26899999999998765 345555554322 10000000 00000000000 0
Q ss_pred ----cccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------C-Cc
Q 010897 315 ----TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------V-GV 373 (498)
Q Consensus 315 ----~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~~ 373 (498)
.....-........| +...|-+.+..++++..+++..+.+.|++.|.+. +..+. . ..
T Consensus 274 ~~~~~~~~~G~~~~p~~a~--l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~g 351 (437)
T PRK05613 274 ARAGLLRDTGATLSPFNAW--VTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTG 351 (437)
T ss_pred HHHHHHHhcCCCCCHHHHH--HHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCc
Confidence 000000001112233 3345667788999999999999999999999764 32221 0 14
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHH
Q 010897 374 PLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
++++|.+++. .....++.+.|.--..... + .+.|.. .-..+.+|+||+- |+.+.|
T Consensus 352 g~~sf~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dL 426 (437)
T PRK05613 352 SVLSFDIKGG-KDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDIDDI 426 (437)
T ss_pred eEEEEEecCC-HHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHHHH
Confidence 5899998531 1223455555543221110 0 001111 1124689999984 788888
Q ss_pred HHHHHHHHHH
Q 010897 434 ISHIEEVLKE 443 (498)
Q Consensus 434 ~~~l~~~l~~ 443 (498)
++||+++++.
T Consensus 427 i~Dl~~Al~~ 436 (437)
T PRK05613 427 IADLEGGFAA 436 (437)
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 238
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=3.5e-18 Score=172.49 Aligned_cols=294 Identities=15% Similarity=0.090 Sum_probs=197.4
Q ss_pred CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH
Q 010897 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (498)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~ 168 (498)
..|....+|+. |++|-|.+. ..++++|+.|+..++.++.++ +++||++...|..+.
T Consensus 60 ~nPt~~~le~~----la~LEg~~~-------a~~~~SGmaAi~~~~~~ll~~-------------GD~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGAG-------CALYPCGAAAVANAILAFVEQ-------------GDHVLMTGTAYEPTQ 115 (395)
T ss_pred CChhHHHHHHH----HHHHhCCCe-------EEEEhHHHHHHHHHHHHHcCC-------------CCEEEEeCCCcHHHH
Confidence 34566666665 888887754 778888999998888776432 478999988887666
Q ss_pred HHH----HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 169 KFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 169 ~~~----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
..+ +.+|++++.++. .|++.++++|+++|++|++.+++|++|.+.|+++|+++|++++ .+++++||
T Consensus 116 ~l~~~~l~~~Gi~v~~vd~------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g----~g~~lvVD 185 (395)
T PRK08114 116 DFCSKILSKLGVTTTWFDP------LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVN----PDAVIMID 185 (395)
T ss_pred HHHHHHHHhcCcEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhC----CCCEEEEE
Confidence 554 557998888763 4678999999999999999999999999999999999999981 14999999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCC--CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCch
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~--g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~ 322 (498)
++++.... ..| . ..++|++..|+|||++++. +.|.++ .+++.. ..+......+ |.-
T Consensus 186 nT~a~p~~--~~p-l-----~~GaDivv~S~tKyl~Ghsdv~~G~v~-~~~~~~-~~l~~~~~~~----------G~~-- 243 (395)
T PRK08114 186 NTWAAGVL--FKA-L-----DFGIDISIQAGTKYLVGHSDAMIGTAV-ANARCW-EQLRENSYLM----------GQM-- 243 (395)
T ss_pred CCCccccc--cCH-H-----HcCCcEEEEcCcccccCCCcceeEEEE-cCHHHH-HHHHHHHHhc----------cCC--
Confidence 99977542 111 1 1269999999999999986 557554 332211 1111000011 111
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCC-CC
Q 010897 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDS-SA 385 (498)
Q Consensus 323 ~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~-~~ 385 (498)
......|.. ..|-+.+..++++..+++..+.+.|++.|.++ |+.+. ...++++|.+++. ..
T Consensus 244 ~~p~~a~l~--~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~ 321 (395)
T PRK08114 244 VDADTAYMT--SRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTD 321 (395)
T ss_pred CCHHHHHHH--HcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccH
Confidence 222334433 35566778899999999999999999999765 43331 1346999999642 11
Q ss_pred CCHHHHHHHHHhcCcEee-----eecC---CC----------CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLRKFGWIVP-----AYTM---PA----------NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v~-----~~~~---~~----------~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
....++.+.|.--...++ +... |. .....+.+|+||+- |+.+.|++||+++++.+
T Consensus 322 ~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 322 EQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 123445555432111110 0000 00 00123689999984 78888999999998753
No 239
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.7e-17 Score=170.38 Aligned_cols=300 Identities=15% Similarity=0.084 Sum_probs=193.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH----HHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~----~~~~~ 174 (498)
++.+.++++.|.+. .+++++|+.|+..++.++..+ +++||++...|..... .+...
T Consensus 73 ~Le~~lA~l~g~~~-------av~~sSG~aAi~~al~all~~-------------Gd~Vv~~~~~y~~t~~~~~~~l~~~ 132 (436)
T PRK07812 73 VVEQRIAALEGGVA-------ALLLASGQAAETFAILNLAGA-------------GDHIVSSPRLYGGTYNLFHYTLPKL 132 (436)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEeCCcchHHHHHHHHHhhcC
Confidence 44445999999865 788888999998888776432 4689988877775443 34446
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++ +. .|+++++++++++|++|++.+++||+|.+.|+++|.++|+++ |++++||++++....
T Consensus 133 Gi~v~~vd-d~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~------gi~liVD~t~a~~~~-- 199 (436)
T PRK07812 133 GIEVSFVE-DP----DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEA------GVPLIVDNTIATPYL-- 199 (436)
T ss_pred eEEEEEEC-CC----CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 77777774 22 389999999999999999999999999999999999999999 999999999876432
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCC-CCcc-c----ccccCccCC---C--CCCc--------
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDD-LPDE-L----VFHINYLGS---D--QPTF-------- 314 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~-l~~~-~----~~~~~yl~~---~--~~~~-------- 314 (498)
..+ . ..++|.+..|+|||++++.+ +|.+++.+... .... + ..++.|... . ...+
T Consensus 200 ~~p-l-----~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (436)
T PRK07812 200 IRP-L-----EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL 273 (436)
T ss_pred CCc-h-----hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH
Confidence 111 1 13699999999999976533 56666643311 1000 0 001111110 0 0000
Q ss_pred -cccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------C-CccEE
Q 010897 315 -TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------V-GVPLV 376 (498)
Q Consensus 315 -~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~~~~v 376 (498)
..-|.. ..... +.+...|-+.+..++++..+++..+.+.|++.|.+. +..+. . ..+++
T Consensus 274 ~~~~G~~--l~p~~--a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~ 349 (436)
T PRK07812 274 LRDLGSA--ISPFN--AFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVL 349 (436)
T ss_pred HHhcCCC--CCHHH--HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEE
Confidence 000111 01122 234445667889999999999999999999999764 33220 1 24599
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHH
Q 010897 377 AFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISH 436 (498)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~ 436 (498)
+|.+++. .....++.+.|.--..... + .+.|.. .-..+.+|+||+- |+.+.|++|
T Consensus 350 sf~l~~~-~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~d 424 (436)
T PRK07812 350 SFELAGG-VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILAD 424 (436)
T ss_pred EEEecCC-HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHH
Confidence 9998542 1124566666543221110 0 000110 1124689999984 788889999
Q ss_pred HHHHHHHHHc
Q 010897 437 IEEVLKEIES 446 (498)
Q Consensus 437 l~~~l~~l~~ 446 (498)
|+++++.+++
T Consensus 425 l~~Al~~~~~ 434 (436)
T PRK07812 425 LEAGFAAAKA 434 (436)
T ss_pred HHHHHHhhhc
Confidence 9999987654
No 240
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=3e-17 Score=168.64 Aligned_cols=339 Identities=15% Similarity=0.083 Sum_probs=208.5
Q ss_pred cCCCCCccccccc---CCC-hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVT---TWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~---~~~-~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+..+ .++ +|.+.+++.+.+.........++. ....++.++++++++.+.. ..+.+++||++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~~----~~v~~~~sgse 114 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT--EPQIALAERLVELLGAPEG----GRVFFCNSGAE 114 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC--HHHHHHHHHHHHhCCCCCC----CEEEEeCchHH
Confidence 4555454444321 123 688888888887763221112221 2224677778998885421 23999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CchhHHHHHHHHcCCeeEEEEe---cCC-c-c-ccCHHHHHHHhhh
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEVELKEVKL---EEG-Y-Y-VMNPVKAVELVDE 201 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~~~~~v~~---~~~-~-~-~~d~~~L~~~i~~ 201 (498)
|+..++..++.. | +..|+..+ ..|.....+....|......+. ..+ . . ..|++.+++.+.+
T Consensus 115 a~~~al~~~~~~--------g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (398)
T PRK03244 115 ANEAAFKLARLT--------G----RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD 182 (398)
T ss_pred HHHHHHHHHHHH--------C----CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC
Confidence 999999887653 1 23455544 4554444444343422111110 000 0 0 1378999999977
Q ss_pred CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCC
Q 010897 202 NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGH 276 (498)
Q Consensus 202 ~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~h 276 (498)
++++|++..+.+++|.+.| +++|.++|+++ |+++++|++|+++.. ........ +++ ..|.+++ .
T Consensus 183 ~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~-~pDi~t~--s 251 (398)
T PRK03244 183 DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRH------GALLVLDEVQTGIGR--TGAWFAHQHDGV-TPDVVTL--A 251 (398)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--cchHHhhhhhCC-CCCEEEE--c
Confidence 8889999999999999987 88999999999 999999999987531 11100001 111 2455544 5
Q ss_pred ccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010897 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 277 K~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~ 356 (498)
|.+.++.++|+++.+++ . .+.+ .......+ ++-+.....+..++|..+..+ +..++..++.++|.+
T Consensus 252 K~l~~G~~ig~~~~~~~-~-~~~~-------~~~~~~~t--~~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~ 317 (398)
T PRK03244 252 KGLGGGLPIGACLAFGP-A-ADLL-------TPGLHGST--FGGNPVACAAALAVLDTIASE---GLLENAERLGEQLRA 317 (398)
T ss_pred hhhhCCcccEEEEEcHH-H-Hhhc-------cCCCCcCC--CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHH
Confidence 88887788999997653 1 1211 11011111 122223444444555444433 455777778889999
Q ss_pred HHhcCCCeEEeeC-CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHH
Q 010897 357 GLEKTGRFEILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLIS 435 (498)
Q Consensus 357 ~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~ 435 (498)
.|++++ +.++.. .....++.+.++.. ....+.++|.++|+++... ...++|++.....+.++++++++
T Consensus 318 ~L~~~~-~~~~~~v~g~g~~~~i~~~~~---~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~p~~~~t~~~i~~~~~ 386 (398)
T PRK03244 318 GIEALG-HPLVDHVRGRGLLLGIVLTAP---VAKAVEAAAREAGFLVNAV-------APDVIRLAPPLIITDAQVDAFVA 386 (398)
T ss_pred HHHhcC-CCceeeEeeccEEEEEEEecc---HHHHHHHHHHHCCeEEeec-------CCCEEEEECCCcCCHHHHHHHHH
Confidence 998864 322211 11355666777421 4568999999999887431 23579999887789999999999
Q ss_pred HHHHHHHHHH
Q 010897 436 HIEEVLKEIE 445 (498)
Q Consensus 436 ~l~~~l~~l~ 445 (498)
.|+++++.++
T Consensus 387 ~l~~~l~~~~ 396 (398)
T PRK03244 387 ALPAILDAAA 396 (398)
T ss_pred HHHHHHHhcc
Confidence 9999987653
No 241
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=2.3e-18 Score=173.58 Aligned_cols=287 Identities=19% Similarity=0.188 Sum_probs=186.1
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|...++|+. ++++.|.+. ++.++||++|+.+++..+ ++ +++||++...|......
T Consensus 54 p~~~~le~~----lA~leg~~~-------~v~~~sG~aAi~~~l~~l-~~-------------GD~VI~~~~~yg~~~~~ 108 (364)
T PRK07269 54 PTRAKLEET----LAAIESADY-------ALATSSGMSAIVLAFSVF-PV-------------GSKVVAVRDLYGGSFRW 108 (364)
T ss_pred ccHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHh-CC-------------CCEEEEecCCcCchHHH
Confidence 455556555 888888654 899999999998877432 21 46898888776533332
Q ss_pred HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccc
Q 010897 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (498)
Q Consensus 171 ~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~ 250 (498)
.....-.. .+.++ +..|+++++++|+++|++|++++|+||+|.+.|+++|+++|+++ |+++++|++|+..
T Consensus 109 ~~~~~~~~-~~~~~---~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~------gi~vvvD~t~~~~ 178 (364)
T PRK07269 109 FNQQEKEG-RFHFT---YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAK------GAKVIVDNTFYSP 178 (364)
T ss_pred HHHHHhcC-cEEEE---ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccc
Confidence 22210000 12221 44789999999999999999999999999999999999999999 9999999998653
Q ss_pred cccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHH
Q 010897 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (498)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~ 328 (498)
. ..... . .++|+++.|.+||+.++.+ .|++++++++.. +.+.....+++ .. ...+..
T Consensus 179 ~---~~~pl----~-~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~-~~~~~~~~~~G----------~~--~s~~~a 237 (364)
T PRK07269 179 I---YQRPI----E-LGADIVLHSATKYLSGHNDVLAGVVVTNDLELY-EKLFYNLNTTG----------AV--LSPFDS 237 (364)
T ss_pred c---cCCch----h-hCCcEEEecCceeccCCCcccceEEEeCcHHHH-HHHHHHHHHhC----------CC--CCHHHH
Confidence 2 21111 1 3689999999999988776 577776655432 21111111111 11 122334
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcC--------
Q 010897 329 YYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFG-------- 399 (498)
Q Consensus 329 ~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G-------- 399 (498)
|.+++ +-+.+..++++..+++.++.+.|++.|.+. ++.++ ..++++|.+.+ .....++.+.|.-..
T Consensus 238 ~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg-~gg~~sf~~~~--~~~~~~f~~~l~~~~~~~slG~~ 312 (364)
T PRK07269 238 YLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG-KGGMISFKVAD--ETRIPHILNSLKVFTFAESLGGV 312 (364)
T ss_pred HHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC-cCcEEEEEECC--HHHHHHHHHhCCcceEccCCCCc
Confidence 44443 335578899999999999999999998754 44344 57899998842 112334444443321
Q ss_pred --cEe-eeecC----CC-----CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 400 --WIV-PAYTM----PA-----NAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 400 --~~v-~~~~~----~~-----~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+. +..+. +. .....+.+|+||+- |+.+.|++||+++++
T Consensus 313 ~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 313 ESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred CeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 111 11110 00 01124689999984 678888999988764
No 242
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=3.8e-18 Score=174.58 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=194.9
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH---
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~--- 166 (498)
.|...++|++ +++++|.+. .+++++|+.|+.+++.+..++ +++|+++.+.|.+
T Consensus 63 ~p~~~~Le~~----iA~~~g~~~-------~l~~~sG~~Ai~~al~~ll~~-------------Gd~Vl~~~~~y~~~~~ 118 (400)
T PRK06234 63 NPTSTEVENK----LALLEGGEA-------AVVAASGMGAISSSLWSALKA-------------GDHVVASDTLYGCTFA 118 (400)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHHH
Confidence 4455566655 888888653 788999999998887766432 4689999987764
Q ss_pred -HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 167 -~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
+...++..|++++.++. .|+++++++++++|++|+++.|+||||.+.|+++|.++|++++. ++++++|+
T Consensus 119 ~~~~~~~~~G~~v~~vd~------~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~----~i~livDe 188 (400)
T PRK06234 119 LLNHGLTRYGVEVTFVDT------SNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNK----ECLVFVDN 188 (400)
T ss_pred HHHHHHhhCCeEEEEECC------CCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCC----CCEEEEEC
Confidence 34456778999888874 27999999999999999999999999999999999999999622 89999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccc-cCccCCCCCCccccCCCch
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGS 322 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~-~~yl~~~~~~~~l~~sr~~ 322 (498)
+|+.+.. .... . .++|++..|.+|++.++.. .|+++.++ +.. +.+... ..+. + +..
T Consensus 189 a~~~~~~---~~~l----~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~-~~l~~~~~~~~------~---g~~-- 247 (400)
T PRK06234 189 TFCTPYI---QRPL----Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EFI-NQVKLFGIKDM------T---GSV-- 247 (400)
T ss_pred CCCchhc---CCch----h-hCCcEEEeeccccccCCCCceeEEEEecH-HHH-HHHHHHHHHHh------c---CCC--
Confidence 9987542 1111 1 1588999999999976542 47777553 221 211110 0100 0 111
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCC
Q 010897 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAH 386 (498)
Q Consensus 323 ~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~ 386 (498)
......|..++ +.+.+..++++..++++++.+.|++.|.+. ++.+. ...++++|.+++. ..
T Consensus 248 l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-~~ 324 (400)
T PRK06234 248 IGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-VE 324 (400)
T ss_pred CCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-HH
Confidence 12222333333 334556788888899999999999988654 33221 0245899999642 12
Q ss_pred CHHHHHHHHHhcCcEeee-----e-cCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 387 TVFEISEGLRKFGWIVPA-----Y-TMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 387 ~~~~l~~~L~~~G~~v~~-----~-~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...++.+.|.-.++..+- . ..|.. .-..+.+|+||+- |+.+.|++||+++++.+
T Consensus 325 ~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 325 EGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 245677777654422210 0 01110 1124689999984 78888899999998764
No 243
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=6.8e-18 Score=173.26 Aligned_cols=322 Identities=13% Similarity=0.066 Sum_probs=199.2
Q ss_pred HHHHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 70 PECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 70 ~~~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
+.+.+++.+.+... ...|....+..++++.+.+|+.+..+...+. +...+++|+|+++|+.+++.++..-
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~al~~~~~~l~~~-------- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGALRVGADFLKRA-------- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHHHHHHHHHHHHh--------
Confidence 56778877776542 3346666788889999888876653332111 1112489999999999888655320
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe-cCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccC---H
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFED---V 221 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~---l 221 (498)
..+++|++++++|..+..+++.+|++++.+|+ +++++.+|++.+++.+.. +++++++++++||||...+ +
T Consensus 118 ---~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~ 194 (396)
T PRK09257 118 ---FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQW 194 (396)
T ss_pred ---CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 01478999999999999999999999999998 344578999999998863 3566777999999999954 5
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc--ccc-C-CCCeeEEEEcCCccCC-CCCCeEEEEE-e-CCC
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-R-LPLVKSINVSGHKYGL-VYAGVGWVVW-R-TKD 294 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~--~~~-~-~~~~dsi~~s~hK~l~-~p~g~g~~~~-~-~~~ 294 (498)
++|.++|+++ ++++++|++|..+.... .+... ..+ . .+++ ++..|..|.+. ++.++||+++ . +++
T Consensus 195 ~~l~~~a~~~------~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~~GlRiG~~~~~~~~~~ 266 (396)
T PRK09257 195 DELAELLKER------GLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLEL-LVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred HHHHHHHHhC------CcEEEEeccccccccch-HHHHHHHHHHHhcCCcE-EEEEEcCCcCccccccceeEEEEeCCHH
Confidence 6688888999 99999999998864210 00000 011 1 1233 55567888776 4899999985 2 222
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---C
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--------FEGYKNIMENCMGNARALREGLEKTG---R 363 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~ 363 (498)
.+... ... ........+ ++ ...+.|.++...+. .+..++..++..++++.+.+.|++.+ +
T Consensus 267 ~~~~~-~~~--~~~~~~~~~---~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~ 337 (396)
T PRK09257 267 EADRV-LSQ--LKATIRTNY---SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRD 337 (396)
T ss_pred HHHHH-HHH--HHHHhhhhc---CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 11000 000 000000000 01 11222333333332 12234556677778888999998874 2
Q ss_pred eEEeeCCCCccEEEE-EecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+.+..+ ..++.+| .+ +...+.+.+.++|+.+. | . .|+++.. .+.++++++++.|+++
T Consensus 338 ~~~~~p--~gg~~~w~~l------~~~~~~~l~~~~~V~~~----p---~----~ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 338 FDFIAR--QRGMFSYSGL------TPEQVDRLREEFGVYAV----G---S----GRINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred cccccc--cceEEEecCC------CHHHHHHHHHcCCEEEc----C---C----CeEEEee-CCHHHHHHHHHHHHhh
Confidence 444333 3444444 33 33344444466787542 2 1 2999853 5777888777777654
No 244
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.81 E-value=3.6e-18 Score=170.65 Aligned_cols=324 Identities=17% Similarity=0.165 Sum_probs=196.3
Q ss_pred CChHHHHHHHHHHhccCCC-------CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~ 139 (498)
.++|.+.+++...+..-+. +|.......++|+-+.+.+.++||+++. .....+-..+|+.||+.++.++.+
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~--~w~anvqp~SGs~An~av~~aLl~ 108 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPK--EWYANVQPHSGSQANLAVYMALLK 108 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STT--TEEEE---SSHHHHHHHHHHHHT-
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcc--cceEEeecCCchHHHHHHHHHHHh
Confidence 3567787777665544221 1222235678999999999999999853 123345555899999888888876
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCC---chhHHHHHHHH-------cCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEE
Q 010897 140 KWQQKRKEQGKPYDKPNIVTGAN---VQVCWEKFARY-------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAA 208 (498)
Q Consensus 140 ~~~~~~~~~g~~~~~~~Iv~s~~---~h~~~~~~~~~-------~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~ 208 (498)
+ ++.|+.-+. .|.+....... ...++..++++++++.+|.+++++.+.+ +|++|++
T Consensus 109 p-------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~ 175 (399)
T PF00464_consen 109 P-------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIIC 175 (399)
T ss_dssp T-------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEE
T ss_pred h-------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEE
Confidence 4 467765443 44443333222 3456778888866789999999998875 7887765
Q ss_pred eeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCc-ccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 209 ~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~-~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
-..++ -...|++++.++|++. |+++++|.+| +|.++.-..| ..+ +.+|+++.+.||.+.+|.| |+
T Consensus 176 G~S~y--~~~~d~~~~reIad~v------ga~l~~D~sH~~GLIa~g~~~---~P~--~~ADvvt~sThKtl~GPrg-gi 241 (399)
T PF00464_consen 176 GASSY--PRPIDFKRFREIADEV------GAYLMADISHIAGLIAGGLFP---NPF--PYADVVTGSTHKTLRGPRG-GI 241 (399)
T ss_dssp E-SST--SS---HHHHHHHHHHT------T-EEEEE-TTTHHHHHTTSS-----GC--CTSSEEEEESSGGG-SSS--EE
T ss_pred Cchhc--cCccCHHHHHHHHHhc------CcEEEecccccccceehheec---Ccc--ccceEEEeeccccccccCc-eE
Confidence 44333 3456899999999999 9999999999 4444321112 122 4699999999999988876 88
Q ss_pred EEEeCCCC-C-------CcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010897 288 VVWRTKDD-L-------PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (498)
Q Consensus 288 ~~~~~~~~-l-------~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 359 (498)
++++.... . ...+.-..+. ....++++......+.++..++.......+++..++..++++.|.+.|.
T Consensus 242 I~~~~~~~~~~~~~~~~~~~l~~~I~~----avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~ 317 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEIDEELAEKIDS----AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ 317 (399)
T ss_dssp EEES-SEEEE-TTS-EEEHHHHHHHHH----HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCcccccHHHHHHHhcc----ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 88772100 0 0000000000 0011122334345667777888776666789999999999999999999
Q ss_pred cCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCC--CCeeEEEEeecCCC
Q 010897 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANA--ENVAVLRVVVREDF 425 (498)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~--~~~~~lRv~v~~~~ 425 (498)
+.| |.++.......+|.+++.. .+++..+..+.|.+.||++.....|.+. .....+|+.+.+-+
T Consensus 318 ~~G-~~v~~ggTd~H~vlvd~~~-~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT 383 (399)
T PF00464_consen 318 ERG-FKVVTGGTDNHQVLVDLRS-FGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALT 383 (399)
T ss_dssp HTT--EEGGGS-SSSEEEEEGGG-GTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHH
T ss_pred hCC-cEEEECCCCCCeEEEEecc-cccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHH
Confidence 987 9999765577899988853 3578888999999999988665666541 22457999975433
No 245
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.81 E-value=3.8e-17 Score=168.04 Aligned_cols=321 Identities=15% Similarity=0.085 Sum_probs=199.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.++........++ .....++.+.|++++|.+. .+++++|++|+..|+.+++..+.. .
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~a~~~~~~---~ 125 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRAFR--NDQLAPLYEELAALTGSHK-------VLPMNSGAEAVETAIKAVRKWGYE---V 125 (401)
T ss_pred CCHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh---c
Confidence 368888888888876433221111 1233345556888887643 899999999999999988653221 1
Q ss_pred cCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 148 ~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
.|.+.++.+|++ +...|.+..-+.. .+. ++..++ ..|+++|++++.+++++|++..+.+
T Consensus 126 ~g~~~~~~~vi~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~~~~aii~e~~~~ 198 (401)
T PRK00854 126 KGVPEGQAEIIVCADNFHGRTLSIVG-FSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITPNTVAFLVEPIQG 198 (401)
T ss_pred cCCCCCCceEEEECCCcCCccHHHHh-ccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCeEEEEEccccC
Confidence 233333445554 5455665443322 121 122222 1589999999998999999999999
Q ss_pred CcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCC-CCeEE
Q 010897 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGW 287 (498)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~ 287 (498)
++|.+.| +++|.++|+++ |+++++|++|.|+.. ........ ++. ..|.++++ |++.+. ..+|+
T Consensus 199 ~~G~~~~~~~~l~~l~~l~~~~------gi~lI~DEv~~g~g~--~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~ 267 (401)
T PRK00854 199 EAGVIIPPAGYFTRVRELCTAN------NVTLILDEIQTGLGR--TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSA 267 (401)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CchHhHHhhcCC-CCCEEEec--ccccCCccCeEE
Confidence 9999987 99999999999 999999999986421 11000011 111 24665553 877665 46888
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (498)
++.+++ .+ +.+ .......++ +-+.....+..++|..+.. ....++..++++++.+.|++++ +..+
T Consensus 268 v~~~~~-~~-~~l-------~~~~~~~t~--~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~ 332 (401)
T PRK00854 268 VLSNSE-VL-GVL-------KPGQHGSTF--GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIV 332 (401)
T ss_pred EEEcHH-HH-hcc-------cCCCCCCCC--CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCce
Confidence 886543 22 111 100111111 1122334444455544432 2356778888999999998875 3222
Q ss_pred eC-CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 368 SK-DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 368 ~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.. .....++.|.+.++ ..+..++++.|.++|+.+.. .+..++|++....++.++++++++.|++++
T Consensus 333 ~~~~g~g~~~~i~~~~~-~~~~~~~~~~L~~~GV~v~~-------~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 333 REVRGRGLMLAVELEPE-AGGARQYCEALKERGLLAKD-------THDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred EEEeccceEEEEEEecC-chhHHHHHHHHHHCCeEEec-------CCCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 11 11344555655332 23567899999999988642 123579999877889999999999998776
No 246
>PRK06460 hypothetical protein; Provisional
Probab=99.81 E-value=1.5e-17 Score=168.86 Aligned_cols=289 Identities=17% Similarity=0.132 Sum_probs=185.9
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC----chhH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN----VQVC 166 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~----~h~~ 166 (498)
|...+++ +.+++++|.+. .+.+++|++|+..++.++.++ +++|+++.+ ++..
T Consensus 45 p~~~~L~----~~lA~l~g~~~-------~v~~~sG~~ai~~~l~al~~~-------------Gd~Vl~~~~~~~~ty~~ 100 (376)
T PRK06460 45 PTVLELT----KKIVELENAEM-------GVAFSSGMGAISTTALALLKP-------------GNSVLVHRDMFGRSYRF 100 (376)
T ss_pred ccHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcCcHHHH
Confidence 4444444 45899999864 455566778888777766432 468888764 4556
Q ss_pred HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 167 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
+...++..|++++.++.++ .+.+++.++++|++|++++|+||||.+.|+++|.++|+++ |+++++|++
T Consensus 101 ~~~~~~~~G~~v~~~~~~~------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~------g~~vivDea 168 (376)
T PRK06460 101 FTDYLKNWGVNVDASNPGS------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKEN------GSILIVDAT 168 (376)
T ss_pred HHHHHHhhCcEEEEECCCC------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 7778888999988887543 2345566677899999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
|+.+. ..... . .++|++..|.+|++.++.+ .|+++ .+++.. +.+.......+ .+. .
T Consensus 169 ~~~~~---~~~~l--~---~~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~-~~l~~~~~~~g---------~~~---~ 226 (376)
T PRK06460 169 FSTPI---NQKPL--E---LGADIVVHSASKFLAGHNDVIAGLAA-GYGKLL-NVIDQMRRTLG---------TSL---D 226 (376)
T ss_pred cCccc---cCChh--h---cCCCEEEeecceeccCCCCceEEEEe-cCHHHH-HHHHHHHHhcC---------CCC---C
Confidence 97642 11111 1 2478999999999865432 67665 333221 21111001111 111 1
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeC-----C----------CCccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSK-----D----------VGVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~----------~~~~~v~f~~~~~~~~~~ 388 (498)
....|.+++ +.+.+..++++..++++++.+.|++.|.+. +..+ + ...++++|.+++. ..+.
T Consensus 227 ~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~-~~~~ 303 (376)
T PRK06460 227 PHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG-QESA 303 (376)
T ss_pred HHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc-HHHH
Confidence 123444443 456678899999999999999999988664 3322 1 1356999998632 1234
Q ss_pred HHHHHHHHh--cCcEe----eeecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 389 FEISEGLRK--FGWIV----PAYTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 389 ~~l~~~L~~--~G~~v----~~~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.++.+.|.- .+..+ .-...|.. .-..+.+|+||+- |+.+.|++||+++++.+
T Consensus 304 ~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 304 LKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred HHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 455555532 11000 00000110 1224689999984 78888999999998753
No 247
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.81 E-value=5.6e-18 Score=172.39 Aligned_cols=281 Identities=18% Similarity=0.151 Sum_probs=185.3
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
++.+.+++++|.+. .+++++|++|+..++.++.++ +++|+++...|.. +...+..+
T Consensus 58 ~le~~la~l~g~~~-------~~~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 58 AFEERIAALEGAER-------AVATATGMSAIQAALMTLLQA-------------GDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCCcchHHHHHHHHHHHh
Confidence 44455899999854 778999999999888776432 4689888877753 45567778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++.+ |+++++++++++|++|+++.|+||+|.+.|+++|.++|+++ |++++||++|+.+..
T Consensus 118 g~~v~~v~~~------d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~------gi~livD~a~~~~~~-- 183 (380)
T TIGR01325 118 GIEVSFVDPT------DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAI------GALLVVDNVFATPVL-- 183 (380)
T ss_pred CCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9998888753 68999999988999999999999999999999999999999 999999999986531
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCC-Ce-EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYA-GV-GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~-g~-g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..+ . . .++|++..|.+|++.++. .. |+++ .+++.+ +.+.. +... . +.. .....+|.++
T Consensus 184 ~~p-l--~---~g~Divv~S~sK~l~g~g~~~gG~vv-~~~~~~-~~l~~---~~~~----~---g~~--~~p~~a~~~l 243 (380)
T TIGR01325 184 QQP-L--K---LGADVVVYSATKHIDGQGRVMGGVIA-GSEELM-AEVAV---YLRH----T---GPA--MSPFNAWVLL 243 (380)
T ss_pred CCc-h--h---hCCCEEEeeccceecCCCCeEEEEEE-eCHHHH-HHHHH---HHHh----h---CCC--CCHHHHHHHH
Confidence 111 1 1 147999999999987753 34 5554 433322 11110 1100 0 111 1112233333
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-eeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEI-LSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.+.+.+..++++..+++.++.+.|+++|.++- ..+. ...++++|.+++ .....++.+.|+
T Consensus 244 --~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~--~~~~~~f~~~l~ 319 (380)
T TIGR01325 244 --KGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD--RAAAWKVLDAVE 319 (380)
T ss_pred --hccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCC
Confidence 34456677899999999999999999987542 2211 024699999952 122445656553
Q ss_pred hcCcEee--e----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVP--A----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 397 ~~G~~v~--~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
--..... . ...|.. .-..+.+|+||+- |+.+.|++||++++
T Consensus 320 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 380 (380)
T TIGR01325 320 LVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRAL 380 (380)
T ss_pred cceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhhC
Confidence 3211100 0 000100 1124689999984 67888888888753
No 248
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.81 E-value=6.1e-18 Score=171.13 Aligned_cols=281 Identities=15% Similarity=0.028 Sum_probs=184.6
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|...++|+. ++++.+ +. .+++++|++|+.+++.++.++ +++||++++.|+.+...
T Consensus 51 p~~~~Le~~----lA~l~~-~~-------~v~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~~~~~ 105 (366)
T PRK07582 51 PTWRALEAA----LGELEG-AE-------ALVFPSGMAAITAVLRALLRP-------------GDTVVVPADGYYQVRAL 105 (366)
T ss_pred ccHHHHHHH----HHHHcC-CC-------EEEECCHHHHHHHHHHHhcCC-------------CCEEEEeCCCcHhHHHH
Confidence 344555554 777772 21 677777788988777665332 47899999999877664
Q ss_pred H----HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 171 ~----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
+ +..|++++.++.+++ +. .+.+++++|+++.|+||+|.+.|+++|.++|+++ |++++||++
T Consensus 106 ~~~~l~~~G~~v~~v~~~~~-~~--------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~------g~~lvVD~t 170 (366)
T PRK07582 106 AREYLAPLGVTVREAPTAGM-AE--------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAA------GALLVVDNT 170 (366)
T ss_pred HHHHHhcCeEEEEEECCCCh-HH--------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHc------CCEEEEECC
Confidence 4 447999999987543 11 2336789999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
|+... ... ..+ .++|++..|.|||+.++.| .|+++.++++.. ..+.....+.+. + ..
T Consensus 171 ~~~~~---~~~--p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g~---------~---~~ 229 (366)
T PRK07582 171 TATPL---GQR--PLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAGA---------I---PG 229 (366)
T ss_pred CCCcc---ccC--chh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhCC---------C---CC
Confidence 86422 111 112 1478999999999988877 488876554322 111111111211 1 12
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee-C----CC-----------CccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS-K----DV-----------GVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~----~~-----------~~~~v~f~~~~~~~~~~ 388 (498)
.+..|..++.+ ..+..++++..+++..+.+.|++.|.+.-+. + .+ ..++++|.++ +.
T Consensus 230 ~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-----~~ 302 (366)
T PRK07582 230 PFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-----DA 302 (366)
T ss_pred HHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-----CH
Confidence 23344444443 4567888999999999999999998765332 1 11 3579999984 24
Q ss_pred HHHHHHHHhcCcEeeeecCCC---------CC---CCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 389 FEISEGLRKFGWIVPAYTMPA---------NA---ENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 389 ~~l~~~L~~~G~~v~~~~~~~---------~~---~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.++.+.|...+++..+..... .. ...+.+|+|++. |+.+.+++||+++++.
T Consensus 303 ~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl----E~~~dli~dl~~al~~ 365 (366)
T PRK07582 303 AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI----EDTDDLVADLERALDA 365 (366)
T ss_pred HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 456666666665543211100 00 224689999985 5566677888887764
No 249
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=8.7e-17 Score=165.65 Aligned_cols=293 Identities=14% Similarity=0.126 Sum_probs=191.3
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
.+.+.++++.|.+. .+.+++|+.|+.+++.++.++ +++||++...|.. +...+..+
T Consensus 67 ~le~~lA~l~g~~~-------al~~~SG~~Ai~~al~all~p-------------Gd~VIv~~~~y~~t~~~~~~~~~~~ 126 (427)
T PRK05994 67 VLEERVAALEGGTA-------ALAVASGHAAQFLVFHTLLQP-------------GDEFIAARKLYGGSINQFGHAFKSF 126 (427)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCcchhHHHHHHHHHHhc
Confidence 34445899998864 888899999999888876442 4689999988874 44456778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++++++|++|++.+++||+|.+.|+++|.++|+++ ++++++|++++...
T Consensus 127 G~~v~~vd~------~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~a~a~~~--- 191 (427)
T PRK05994 127 GWQVRWADA------DDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRA------GLPLIVDNTLASPY--- 191 (427)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCccccc---
Confidence 999888864 378999999999999999999999999999999999999999 99999999997543
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCC-CCCcccccccCccCCCCCC-------------------
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKD-DLPDELVFHINYLGSDQPT------------------- 313 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~-~l~~~~~~~~~yl~~~~~~------------------- 313 (498)
..... + .++|.++.|.|||++++.+ +|.+++.... .+... . ...++......
T Consensus 192 ~~~pl--~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~-k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (427)
T PRK05994 192 LIRPI--E---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKS-G-KYPMLSEPRPEYHGLVLHETFGNFAFAIAA 264 (427)
T ss_pred cCCcc--c---cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccc-c-ccccccCCcchhhhhhHHHHhhhhhhHHHH
Confidence 21111 1 3699999999999987665 4655553221 11000 0 00011100000
Q ss_pred ----ccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------C-C
Q 010897 314 ----FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------V-G 372 (498)
Q Consensus 314 ----~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~ 372 (498)
....|.. ..... +.+...|-+.+..++++..+++.++.+.|++.|.+. +..+. . .
T Consensus 265 ~~~~~~~~G~~--~~~~~--A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~ 340 (427)
T PRK05994 265 RVLGLRDLGPA--ISPFN--AFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGA 340 (427)
T ss_pred HHHHHHhcCCC--CCHHH--HHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCc
Confidence 0000110 11122 334444556788999999999999999999999764 32221 0 2
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
.++++|.+++. .....++.+.|.--.+..+ + .+.|.. ....+.+|+||+- |+.+.
T Consensus 341 g~~~sf~l~~~-~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~d 415 (427)
T PRK05994 341 GAVFTFGLKGG-YEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDD 415 (427)
T ss_pred eEEEEEEecCC-HHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHH
Confidence 45899998632 1123455555532211100 0 000110 1123689999984 67888
Q ss_pred HHHHHHHHHH
Q 010897 433 LISHIEEVLK 442 (498)
Q Consensus 433 l~~~l~~~l~ 442 (498)
|++||+++++
T Consensus 416 li~dl~~Al~ 425 (427)
T PRK05994 416 IIADLEQALA 425 (427)
T ss_pred HHHHHHHHHh
Confidence 8999998886
No 250
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.80 E-value=1.5e-17 Score=151.64 Aligned_cols=328 Identities=17% Similarity=0.099 Sum_probs=228.0
Q ss_pred ChHHHHHHHHHHhccCC---------CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNY---------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~---------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~ 138 (498)
.++++.+++.+.-+-.. .+--.-|... .+..-+++++|++. .-+|.|+-+|-+..+-++.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~----~F~~dlaeFlg~D~-------~R~t~GARe~KfavMhal~ 97 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIK----DFLEDLAEFLGMDE-------VRVTAGAREAKFAVMHALC 97 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHH----HHHHHHHHHhCCce-------eeecccchhhHHHHHHHhc
Confidence 35678887776654311 1111112222 33344999999986 8899999999988888775
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhh-------CCeEEEEee
Q 010897 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-------NTICVAAIL 210 (498)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~-------~t~~v~~~~ 210 (498)
.+ ++-|++...+|++..-+|...|+.+..||-+. ..|.++++...+.|++ .+.+.++|+
T Consensus 98 ~~-------------gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh 164 (382)
T COG1103 98 KE-------------GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTH 164 (382)
T ss_pred cC-------------CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEec
Confidence 53 57899999999999999999999999999651 2489999977776653 367788899
Q ss_pred ccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEE
Q 010897 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (498)
Q Consensus 211 ~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~ 290 (498)
+....|.+.|.+.++++|+++ ++++++.+||..+-+|... +..++|+|..|+||.+.+...||++-+
T Consensus 165 ~Dg~YGNl~Dakkva~ic~e~------gvPlllN~AYt~Grmpvs~-------ke~g~DFiVgSGHKsmAAs~PiGvl~~ 231 (382)
T COG1103 165 VDGEYGNLADAKKVAKICREY------GVPLLLNCAYTVGRMPVSG-------KEIGADFIVGSGHKSMAASAPIGVLAM 231 (382)
T ss_pred cCCCcCCchhhHHHHHHHHHc------CCceEeecceeeccccccc-------cccCCCEEEecCccchhccCCeeEEee
Confidence 999999999999999999999 9999999999877655432 234699999999999999999999887
Q ss_pred eCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC
Q 010897 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (498)
Q Consensus 291 ~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (498)
+.. +-...+.....+..... ---+-+|-.+..++.+.+++-..- +. -.+...-.+.+++|.++|++++++..+...
T Consensus 232 ~eE-~ae~V~r~Sg~~~~~KE-vellGCT~rGapivTlmASfP~V~-eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~r 307 (382)
T COG1103 232 SEE-WAEIVLRRSGRAFPKKE-VELLGCTVRGAPIVTLMASFPHVV-ER-VKRWDEEVEKARWFVAELEKIGGVKQLGER 307 (382)
T ss_pred hhH-HHHHHHhhcccccccce-eeeecccccCchHHHHHhcCHHHH-HH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCC
Confidence 653 22222111111111110 011224544566776776663332 11 234455667899999999999988776643
Q ss_pred C-CccEEEEEecCC------CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 371 V-GVPLVAFSLKDS------SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 371 ~-~~~~v~f~~~~~------~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+ ...++-|..+.- ..-..+-|.+.|.++||.-.. | ....++.+|+ +..+.|+++.++++++++++.
T Consensus 308 Pk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~---~---G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 308 PKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQ---P---GQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccc---c---CceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 3 556777765321 111234577888888875211 1 2245688887 677999999999999988764
No 251
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.2e-17 Score=167.60 Aligned_cols=297 Identities=16% Similarity=0.121 Sum_probs=188.0
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH-H---Hc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-R---YF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~-~---~~ 174 (498)
++.+.++++.|.+. .+++++|++|+.+++.++.++ +++|+++.+.|......+ . ..
T Consensus 62 ~Le~~lA~l~g~~~-------~l~~ssG~~Ai~~al~al~~~-------------Gd~Vl~~~~~Y~~t~~~~~~~l~~~ 121 (425)
T PRK06084 62 VLEQRVAALEGGVG-------ALAVASGMAAITYAIQTIAEA-------------GDNIVSVAKLYGGTYNLLAHTLPRI 121 (425)
T ss_pred HHHHHHHHHhCCCc-------eeEehhHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHHHHHHhcccc
Confidence 34455899988653 678888999999888877542 468988888766333332 2 24
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|+++..++. .|+++++++++++|++|+++.++||+|.+.|+++|.++|+++ ++++++|++++.+..
T Consensus 122 gi~v~~~d~------~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------~i~vVvD~a~a~~~~-- 187 (425)
T PRK06084 122 GIETRFAAH------DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRH------GVPLIVDNTVATPVL-- 187 (425)
T ss_pred eeEEEEECC------CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 666555542 489999999999999999999999999999999999999999 999999999986432
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCC-CCc---c---cc-cccCccCCC-CCCcc---------
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDD-LPD---E---LV-FHINYLGSD-QPTFT--------- 315 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~-l~~---~---~~-~~~~yl~~~-~~~~~--------- 315 (498)
.... ..++|++..|.+||+.++.. +|.+++.+... ... . +. ..+.|.+-. ...+.
T Consensus 188 -~~p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (425)
T PRK06084 188 -CRPF-----EHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCR 261 (425)
T ss_pred -CChh-----hcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHH
Confidence 1111 12589999999999976533 45555543211 000 0 00 011111100 00000
Q ss_pred ---cc--CCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------C-Cc
Q 010897 316 ---LN--FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------V-GV 373 (498)
Q Consensus 316 ---l~--~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~~ 373 (498)
.. |.+ ...... .+...|-+.+..++++..+++.++.+.|+++|.+. +..+. . ..
T Consensus 262 ~~~~~~~g~~--l~~~~a--~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~g 337 (425)
T PRK06084 262 VVPLRNMGAA--LSPFNA--FLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPA 337 (425)
T ss_pred HHHHHhcCCC--CCHHHH--HHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcc
Confidence 00 111 111223 33344567788999999999999999999999765 33221 1 24
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHH
Q 010897 374 PLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
++++|.+++. .....++.+.|.--....+ + .+.|.. ....+.+|+||+- |+.+.|
T Consensus 338 g~~s~~~~~~-~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dL 412 (425)
T PRK06084 338 SILSFGIKGG-QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDI 412 (425)
T ss_pred eEEEEEecCC-HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHH
Confidence 5999999642 1123456666543221000 0 001110 1124689999984 788889
Q ss_pred HHHHHHHHHHH
Q 010897 434 ISHIEEVLKEI 444 (498)
Q Consensus 434 ~~~l~~~l~~l 444 (498)
++||+++++..
T Consensus 413 i~dl~~Al~~~ 423 (425)
T PRK06084 413 IADLAQALDAS 423 (425)
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 252
>PRK05939 hypothetical protein; Provisional
Probab=99.80 E-value=2.4e-17 Score=168.05 Aligned_cols=299 Identities=18% Similarity=0.064 Sum_probs=192.2
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh---H
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV---C 166 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~---~ 166 (498)
.|....+|++ ++++.|... .+.+++|+.|+..++.++.++ +++||+++..|. .
T Consensus 46 ~p~~~~lE~~----la~leg~~~-------~v~~ssG~~Ai~~~l~all~~-------------Gd~Vv~~~~~y~~t~~ 101 (397)
T PRK05939 46 TPTTAALEAK----ITKMEGGVG-------TVCFATGMAAIAAVFLTLLRA-------------GDHLVSSQFLFGNTNS 101 (397)
T ss_pred CHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHHcCC-------------CCEEEECCCccccHHH
Confidence 3555566665 888888864 666777788988877766432 468999988765 3
Q ss_pred HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 167 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
+...++..|++++.+++ .|+++++++++++|++|++.+++||+|.+.|+++|.++|+++ |++++||++
T Consensus 102 ~~~~l~~~G~~v~~v~~------~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~t 169 (397)
T PRK05939 102 LFGTLRGLGVEVTMVDA------TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER------GLLYVVDNT 169 (397)
T ss_pred HHHHHHhcCCEEEEECC------CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc------CCEEEEECC
Confidence 33456778999988875 378999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCC-CCcccccccCccCCCCCCcc---------
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDD-LPDELVFHINYLGSDQPTFT--------- 315 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~-l~~~~~~~~~yl~~~~~~~~--------- 315 (498)
++.+.. +.+ ...++|++..|.+||++++-+ +|++++.+... ..........|.......+.
T Consensus 170 ~a~~~~--~~~------~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T PRK05939 170 MTSPWL--FRP------KDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGL 241 (397)
T ss_pred cccccc--cCc------cccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence 865421 111 112589999999999987433 46665533210 00000000001000000000
Q ss_pred -ccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEE
Q 010897 316 -LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAF 378 (498)
Q Consensus 316 -l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f 378 (498)
..|.. ......| +...|.+.+..++++..+++..+.+.|++.|.+. +..+. ...++++|
T Consensus 242 ~~~G~~--~~p~~a~--l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf 317 (397)
T PRK05939 242 RDMGAT--LSSEAAH--RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSF 317 (397)
T ss_pred HhcCCC--CCHHHHH--HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEE
Confidence 00111 1112223 3335667888999999999999999999998653 33221 13568999
Q ss_pred EecCCCCCCHHHHHHHHHhc--CcEee---e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 379 SLKDSSAHTVFEISEGLRKF--GWIVP---A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~--G~~v~---~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
.+++. .+..++.+.|+-- +..+- + .+.|.. ....+.+|+||+- |+.+.|++||+
T Consensus 318 ~~~~~--~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~ 391 (397)
T PRK05939 318 ELADG--IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFE 391 (397)
T ss_pred EeCCH--HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHH
Confidence 99642 2445666665431 11000 0 000100 1113689999984 68888899999
Q ss_pred HHHH
Q 010897 439 EVLK 442 (498)
Q Consensus 439 ~~l~ 442 (498)
++++
T Consensus 392 ~Al~ 395 (397)
T PRK05939 392 QALD 395 (397)
T ss_pred HHHh
Confidence 8875
No 253
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.80 E-value=6.2e-17 Score=165.25 Aligned_cols=320 Identities=16% Similarity=0.072 Sum_probs=195.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+.+.+++.........+ ......++.+.+++++|.+. ..+++||++|+.+++.+++.... .
T Consensus 44 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~-------~~~~~sg~~a~~~a~~~~~~~~~-~--- 110 (379)
T TIGR00707 44 AHPKLVEALKEQLEKLVHVSNLY--YTEPQEELAEKLVEHSGADR-------VFFCNSGAEANEAALKLARKYTG-D--- 110 (379)
T ss_pred CCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHhh-c---
Confidence 34788888888777642211112 23445567777999998763 99999999999999887643210 0
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeE----EEEecCCcccc----CHHHHHHHhhhCCeEEEEeeccCCcccc-
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYVM----NPVKAVELVDENTICVAAILGSTLTGEF- 218 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~----~v~~~~~~~~~----d~~~L~~~i~~~t~~v~~~~~~t~tG~~- 218 (498)
.| ..+++|+++++++..+...+...+.... ..++..+ +.. |+++|++.+++++++|+++.+++++|..
T Consensus 111 ~~--~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~ 187 (379)
T TIGR00707 111 KG--KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPG-FSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNP 187 (379)
T ss_pred cC--CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCC-ceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCcc
Confidence 00 0135788877776555544554444321 1222221 222 8999999998888888887666666654
Q ss_pred ---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+++++|.++|+++ ++++++|++|+++.. ....... ..+. ..|.++ ..|.+.++.++|+++.+. +
T Consensus 188 ~~~~~l~~i~~l~~~~------~~~~i~De~~~~~~~--~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~ 255 (379)
T TIGR00707 188 ASAEFLKALREICKDK------DALLIFDEVQTGIGR--TGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-E 255 (379)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-H
Confidence 2489999999999 999999999987531 1110110 1111 134443 468877778899988643 2
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-eC-CCC
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SK-DVG 372 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-~~~ 372 (498)
.. +.+. ......+ ++-+.....+..++|..+... +..++..++++++++.|+++. .... .. ...
T Consensus 256 ~~-~~~~-------~~~~~~~--~~~~~~~~~aa~aaL~~~~~~---~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 321 (379)
T TIGR00707 256 VA-EAFT-------PGDHGST--FGGNPLACAAALAVLEVIEKE---RLLENVKEKGDYFKERLEELG-KNYPNKEVRGK 321 (379)
T ss_pred HH-hhhc-------CCCCCCC--CCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHH-hhCCCCccccC
Confidence 22 2111 0000011 122223444455555544332 355667777788887777653 2211 11 113
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+++.+.+++ +..++.++|.++|+.+... +..++|++++...+.++++++++.|+++
T Consensus 322 g~~~~~~~~~----~~~~~~~~l~~~Gv~v~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 322 GLMLGIELEA----PCKDIVKKALEKGLLVNCA-------GPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ceEEEEEecC----cHHHHHHHHHHCCcEEeeC-------CCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 4567777643 3568999999999887531 2357999987767999999988888765
No 254
>PLN02397 aspartate transaminase
Probab=99.79 E-value=1.7e-17 Score=171.44 Aligned_cols=320 Identities=14% Similarity=0.071 Sum_probs=191.5
Q ss_pred HHHHHHHHhccC-CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH--HHHHHHHHHHHHHHHHHHhc
Q 010897 72 CDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE--AIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 72 ~~~~l~~~~~~n-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se--a~~la~~a~~~~~~~~~~~~ 148 (498)
+.+++...++.+ ...|....+..++++.+.+|+.+..+.+.++ +......+.+++. ++.+++.....+
T Consensus 71 ~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-~~i~~~~i~~g~Ga~~l~~~~~~~~~p-------- 141 (423)
T PLN02397 71 VRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-NRVATVQCLSGTGSLRLGAEFLARFYP-------- 141 (423)
T ss_pred HHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-CeeEeeecccchHHHHHHHHHHHHhCC--------
Confidence 444433333333 3356677788899999888875543222111 1111111333333 333444333221
Q ss_pred CCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe-cCCccccCHHHHHHHhh---hCCeEEEEeeccCCcccccC---H
Q 010897 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFED---V 221 (498)
Q Consensus 149 g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~L~~~i~---~~t~~v~~~~~~t~tG~~~~---l 221 (498)
+++|++++++|..+...++..|++++.+|+ +++++.+|++.+++.+. +++++++++.|+||||.+.+ +
T Consensus 142 -----Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l 216 (423)
T PLN02397 142 -----GSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQW 216 (423)
T ss_pred -----CCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 479999999999999999999999999998 33447899998888775 45788888999999999954 5
Q ss_pred HHHHHHHHHhhcccCCCceEEEecCccccccccc-CCCCc-ccc--CCCCeeEEEEcCCccCC-CCCCeEEEEE--eCCC
Q 010897 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLE-WDF--RLPLVKSINVSGHKYGL-VYAGVGWVVW--RTKD 294 (498)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~-~~~~~-~~~--~~~~~dsi~~s~hK~l~-~p~g~g~~~~--~~~~ 294 (498)
++|+++|+++ |++|++|++|.++...-. .+... ..+ ..+++ ++..|..|.+. ++.++||+++ .+++
T Consensus 217 ~~i~~~a~~~------~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v-I~~~SfSK~~~~~G~RvG~~v~~~~~~~ 289 (423)
T PLN02397 217 EQISDLIKSK------NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI-LVAQSYAKNMGLYGERVGALSVVCKSAD 289 (423)
T ss_pred HHHHHHHHhC------CcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE-EEEEECcccCCCccccceEEEEEeCCHH
Confidence 6678888999 999999999998752100 00000 011 11233 44456677665 7899999863 2222
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH--------HHHHHHHHHHHHHHHHHHHHhcCC---C
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--------GYKNIMENCMGNARALREGLEKTG---R 363 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~--------g~~~~~~~~~~~a~~l~~~L~~~~---~ 363 (498)
.+ ..+... +........ +. ...+.|.++...+... .+++..+...++++.+.+.|++++ +
T Consensus 290 ~~-~~~~~~---~~~~~~~~~--~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~ 360 (423)
T PLN02397 290 VA-VRVKSQ---LKLIARPMY--SN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGD 360 (423)
T ss_pred HH-HHHHHH---HHHHHhccc--CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 11 100000 000000000 01 1234455444444322 145666777889999999999884 2
Q ss_pred eEEeeCCCCccEEEE-EecCCCCCCHHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+.++.+ ..++++| ++ + .+++++|.+ .|+.+. + . .|+++. ..+.+.++++++.|++++
T Consensus 361 ~~~~~p--~gg~fl~~~l------~-~~~~~~Ll~~~~V~v~----~---~----~Ri~~~-~~~~~~i~~~~~~i~~~~ 419 (423)
T PLN02397 361 WSHITK--QIGMFSFTGL------N-KEQVDRMTKEYHIYMT----R---D----GRISMA-GLSSKNVPYLADAIHAVV 419 (423)
T ss_pred CCcccC--CceEEEecCC------C-HHHHHHHHHhCCEEEC----C---C----CeEEEe-eCCHHHHHHHHHHHHHHH
Confidence 554333 3455554 33 3 358888865 577652 1 1 199984 357788998899888886
Q ss_pred H
Q 010897 442 K 442 (498)
Q Consensus 442 ~ 442 (498)
+
T Consensus 420 ~ 420 (423)
T PLN02397 420 T 420 (423)
T ss_pred h
Confidence 4
No 255
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=3.6e-17 Score=166.05 Aligned_cols=283 Identities=17% Similarity=0.101 Sum_probs=185.3
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH----HHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~----~~~~~~~~ 174 (498)
.+.+.++++.|.+. .+++++|+.|+.+++ .+.. .+++|+++++.|.. +...+...
T Consensus 54 ~Le~~la~l~g~~~-------al~~~SG~~Al~~~l-~~l~-------------pGd~Vi~~~~~y~~t~~~~~~~~~~~ 112 (380)
T PRK06176 54 ALEELIADLEGGVK-------GFAFASGLAGIHAVF-SLFQ-------------SGDHVLLGDDVYGGTFRLFDKVLVKN 112 (380)
T ss_pred HHHHHHHHHhCCCC-------EEEECCHHHHHHHHH-HHcC-------------CCCEEEEcCCChhHHHHHHHHHHHhc
Confidence 34445999999764 566677777876444 3322 14789999887763 34456677
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++++++|++|++.+|+||+|.+.|+++|.++|+++ +++++||++|+.+.
T Consensus 113 gi~v~~vd~------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~------gi~vivD~t~a~~~--- 177 (380)
T PRK06176 113 GLSCTIIDT------SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH------GLLTIVDNTFATPY--- 177 (380)
T ss_pred CeEEEEcCC------CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc------CCEEEEECCccccc---
Confidence 888887764 379999999999999999999999999999999999999999 99999999998643
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
..... . .++|++..|.+||+.++.+ .|+++.++++.. ..+.....+++.. ......|..+
T Consensus 178 ~~~p~--~---~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~-~~~~~~~~~~G~~------------~~~~~~~l~~ 239 (380)
T PRK06176 178 YQNPL--L---LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALA-QEIAFFQNAIGGV------------LGPQDSWLLQ 239 (380)
T ss_pred cCCcc--c---cCCCEEEecCceeccCCccceeeEEEecHHHHH-HHHHHHHHHhcCC------------CCHHHHHHHH
Confidence 21111 1 2689999999999988764 566665554321 1111111111110 0111223332
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
.|.+.+..++++..+++..+.+.|++.|.+. ++.+. ...++++|.+++ .....++.+.|.
T Consensus 240 --~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~~f~~~l~ 315 (380)
T PRK06176 240 --RGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN--DSEAVAFVESLK 315 (380)
T ss_pred --hccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCC
Confidence 3556677888999999999999999988764 32221 024689999953 223445555554
Q ss_pred hcCcEee--e----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVP--A----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 397 ~~G~~v~--~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
-..+..+ . .+.|.. .-..+.+|+||+- |+.+.|++||+++++.
T Consensus 316 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 316 LFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAK 378 (380)
T ss_pred cceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 3221100 0 001110 1124689999984 7888899999998864
No 256
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=1.3e-16 Score=164.19 Aligned_cols=292 Identities=17% Similarity=0.142 Sum_probs=189.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh----HHHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV----CWEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~----~~~~~~~~~ 174 (498)
++.+.+++++|.+. .+++++|++|+..++.++.++ +++|+++.+.|. .+...++.+
T Consensus 61 ~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 61 VLEQRIAALEGGVA-------ALAVASGQAAITYAILNLAQA-------------GDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHHHHHHHHHHc
Confidence 45556999999754 889999999998888776432 468988888764 445667788
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++.+ |++++++++++++++|++..++||+|.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 121 G~~v~~v~~~------d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~------~i~livD~t~~~~~~-- 186 (418)
T TIGR01326 121 GIEVRFVDPD------DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAH------GVPLIVDNTFATPYL-- 186 (418)
T ss_pred CcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCchhhc--
Confidence 9998888742 78999999999999999999999999999999999999999 999999999975421
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCC-CCCeEEEEEeCCCCCCcccccccCccCCCCC-Ccc-----------------
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQP-TFT----------------- 315 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~-p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~-~~~----------------- 315 (498)
..+ +. .++|++..|.+||+.+ ...+|+++++........ ... ..+..... ...
T Consensus 187 ~~~-----l~-~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~-~~~-~~~~~~~~~q~a~~~~~~~~~~~~~~~~~ 258 (418)
T TIGR01326 187 CRP-----ID-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWAN-GRF-PLFTTPDPSYHGLVFTETFGNPAFIVKAR 258 (418)
T ss_pred CCc-----hh-cCCeEEEECccccccCCccceEEEEEecccccccc-ccc-ccccCCCCccccchhhhhhchhhHHHHHH
Confidence 111 11 2589999999999876 345788887653221110 000 00000000 000
Q ss_pred ---c--cCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee-CC---------------C-Cc
Q 010897 316 ---L--NFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS-KD---------------V-GV 373 (498)
Q Consensus 316 ---l--~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~---------------~-~~ 373 (498)
+ .|... .....|..+ .|...+..++++..+++..+.+.|.+.+++..+. +. . ..
T Consensus 259 ~~~~~~~G~~~--~p~~a~~~~--~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g 334 (418)
T TIGR01326 259 VQLLRDLGAAL--SPFNAFLLL--QGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFG 334 (418)
T ss_pred HHHHHhcCCCC--CHHHHHHHH--CCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCc
Confidence 0 01110 112233333 3445667778888889999999999988765322 11 0 24
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCcEee-----e-ecCCC--------------CCCCeeEEEEeecCCCCHHHHHHH
Q 010897 374 PLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----A-YTMPA--------------NAENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~--------------~~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
++++|.+++. .....++.+.|+--....+ + .+.|. ..-..+.+|+||+- |+.+.|
T Consensus 335 ~~~s~~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl 409 (418)
T TIGR01326 335 AVLSFEIKGG-REAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGI----ENIDDI 409 (418)
T ss_pred ceEEEEecCC-HHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecC----CCHHHH
Confidence 5899998642 1223566666543221100 0 00010 01124689999984 678888
Q ss_pred HHHHHHHH
Q 010897 434 ISHIEEVL 441 (498)
Q Consensus 434 ~~~l~~~l 441 (498)
++||++++
T Consensus 410 ~~dl~~Al 417 (418)
T TIGR01326 410 IADLEQAL 417 (418)
T ss_pred HHHHHHhh
Confidence 89988876
No 257
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1e-16 Score=163.82 Aligned_cols=304 Identities=19% Similarity=0.154 Sum_probs=198.2
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~ 169 (498)
.|....+|+. ++++.|... .+.+++|+.|+.+++.++..+ +++||++...|.....
T Consensus 60 nPtv~~lE~~----la~leg~~~-------av~~~SG~aAi~~al~all~~-------------GD~VI~~~~~Y~~T~~ 115 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGVG-------AVATASGQAAIMLAVLNICSS-------------GDHLLCSSTVYGGTFN 115 (432)
T ss_pred CcHHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHhcCC-------------CCEEEECCCchHHHHH
Confidence 4566666665 888888864 788999999999999876432 5799999998875555
Q ss_pred H----HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 170 ~----~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
+ +..+|++++.+. ..+|+++++++|+++|++|++..++||++.+.|+++|.++|+++ |+++++|+
T Consensus 116 ~~~~~l~~~Gi~v~~vd-----~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~------gi~livD~ 184 (432)
T PRK06702 116 LFGVSLRKLGIDVTFFN-----PNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKEL------EVPFIVDN 184 (432)
T ss_pred HHHHHHHHCCCEEEEEC-----CCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHc------CCEEEEEC
Confidence 4 677899988884 34789999999999999999999999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe--EEEEEeCC-CCCCc---cccc-ccC-----ccCCCC--
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTK-DDLPD---ELVF-HIN-----YLGSDQ-- 311 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~--g~~~~~~~-~~l~~---~~~~-~~~-----yl~~~~-- 311 (498)
+++. |+....+ ..++|++.-|..||+.++.++ |.++.... .+... .+.. ... |..+..
T Consensus 185 T~~t---P~~~~pl-----~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 185 TLAT---PYLCQAF-----EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred CCCc---hhhCChh-----hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 9864 3232211 136999999999999887664 43331211 11000 0000 000 000000
Q ss_pred ------C---CccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-eCC-----------
Q 010897 312 ------P---TFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SKD----------- 370 (498)
Q Consensus 312 ------~---~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~----------- 370 (498)
. ...+ |.. ......|..+ .|-+.+..++++..+++..+.+.|++.|.+..+ .+.
T Consensus 257 ~~~~~~~~~~~~~~-g~~--~sp~~a~l~~--rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~ 331 (432)
T PRK06702 257 AYIVKARVQLLRDY-GNC--MSPFNAYISN--IGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQ 331 (432)
T ss_pred hHHHHHHHHHHHHc-cCC--CCHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHH
Confidence 0 0000 111 1223444444 344567889999999999999999999976532 221
Q ss_pred ----C-CccEEEEEecCCCCCCHHHHHHHHHhcCcEee-----ee-cCCCC--------------CCCeeEEEEeecCCC
Q 010897 371 ----V-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVP-----AY-TMPAN--------------AENVAVLRVVVREDF 425 (498)
Q Consensus 371 ----~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~-----~~-~~~~~--------------~~~~~~lRv~v~~~~ 425 (498)
. ..++++|.+++. .....++.+.|+--..... +. ..|.. .-..+.+|+||+-
T Consensus 332 ~~~~~g~gg~~sf~l~~~-~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl-- 408 (432)
T PRK06702 332 KYLKKGASGVLTFGIKGG-LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI-- 408 (432)
T ss_pred HhCcCCCceEEEEEecCC-HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc--
Confidence 0 236999999631 1223455555542221110 00 00110 1124689999984
Q ss_pred CHHHHHHHHHHHHHHHHHHHc
Q 010897 426 SRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 426 t~~~~~~l~~~l~~~l~~l~~ 446 (498)
|+.|.|++||+++++--++
T Consensus 409 --Ed~eDLi~Dl~~Al~~~~~ 427 (432)
T PRK06702 409 --EDVSDIIADLEAALVGGKQ 427 (432)
T ss_pred --CCHHHHHHHHHHHHhcCcc
Confidence 7888889999998865433
No 258
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=7.6e-17 Score=163.61 Aligned_cols=281 Identities=19% Similarity=0.128 Sum_probs=181.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh-HHH---HHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV-CWE---KFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~-~~~---~~~~~~ 174 (498)
++.+.++++.|.+. .+++++|+.++..++ .+.++ +++|+++.+.|. .+. ..+..+
T Consensus 54 ~Le~~lA~l~g~~~-------~~~~~sG~aai~~~~-~~l~~-------------Gd~Viv~~~~y~~~~~~~~~~~~~~ 112 (377)
T PRK07671 54 ALEELIAVLEGGHA-------GFAFGSGMAAITAVM-MLFSS-------------GDHVILTDDVYGGTYRVMTKVLNRF 112 (377)
T ss_pred HHHHHHHHHhCCCc-------eEEeCCHHHHHHHHH-HHhCC-------------CCEEEECCCccchHHHHHHHHHhcC
Confidence 45556999999864 455666666665433 33221 468999999887 333 344557
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++|+...
T Consensus 113 G~~v~~v~~------~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~------g~~lvvD~a~~~~~--- 177 (377)
T PRK07671 113 GIEHTFVDT------SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK------GLLTIVDNTFMTPY--- 177 (377)
T ss_pred CeEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCCccc---
Confidence 888888763 389999999999999999999999999999999999999999 99999999997643
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
.... .. .++|++..|.+||++++.+ .|++++++++.. ..+.....+.+.. ......|..+
T Consensus 178 ~~~p--~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~-~~~~~~~~~~g~~------------~~~~~a~l~~ 239 (377)
T PRK07671 178 WQSP--IS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPELA-EDLHFVQNSTGGI------------LGPQDSWLLL 239 (377)
T ss_pred cCCh--hh---hCCeEEEecCcccccCCccceeEEEEeCcHHHH-HHHHHHHHhhcCC------------CCHHHHHHHH
Confidence 1111 11 2579999999999988765 466666554322 2111111122111 1223344444
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
+ +...+..++++..+++..+.+.|++.+.+. ++.+. ...++++|.+ +. .....++.++|.
T Consensus 240 ~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~-~~~~~~f~~~l~ 315 (377)
T PRK07671 240 R--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GS-EETANKVLERLQ 315 (377)
T ss_pred c--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CC-HHHHHHHHHhCC
Confidence 3 334566788999999999999999988764 33221 0245899988 31 222345555553
Q ss_pred hc--CcEeee----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 397 KF--GWIVPA----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 397 ~~--G~~v~~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
-- +..+-. .+.|.. .-..+.+|+||+- |+.+.|++||++++
T Consensus 316 l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 316 YFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred cceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHh
Confidence 21 111100 001110 1124689999984 67888899998876
No 259
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.7e-17 Score=166.24 Aligned_cols=287 Identities=15% Similarity=0.085 Sum_probs=191.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH----HHHH
Q 010897 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (498)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~----~~~~ 173 (498)
+.+.+.++.+-|.+. .+++++|++|+..++.++.++ +++||++.+.|.++.. .++.
T Consensus 67 ~~Le~~la~le~~~~-------~v~~sSG~aAi~~~l~all~~-------------GD~Vlv~~~~Y~~~~~l~~~~l~~ 126 (395)
T PRK05967 67 DALCKAIDALEGSAG-------TILVPSGLAAVTVPFLGFLSP-------------GDHALIVDSVYYPTRHFCDTMLKR 126 (395)
T ss_pred HHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEccCCcHHHHHHHHHHHHh
Confidence 345555888776543 677777899998888777543 5799999999998764 4577
Q ss_pred cCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 174 ~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
+|+++..++.+ +.+.++++++++|++|+++.|+||++.+.|+++|+++|+++ |++++||++|+..+.
T Consensus 127 ~Gi~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~------g~~vvVD~t~a~p~~- 193 (395)
T PRK05967 127 LGVEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRH------GAIVMMDNTWATPLY- 193 (395)
T ss_pred cCeEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHh------CCEEEEECCccCcee-
Confidence 89998888532 35789999999999999999999999999999999999999 999999999987531
Q ss_pred ccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHH
Q 010897 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ 331 (498)
Q Consensus 254 ~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~ 331 (498)
..| +. .++|.+..|..||+.+..+ .|++. .+++.. ..+......+ |.- ......|
T Consensus 194 -~~p-l~-----~GaDivv~S~tKy~~Gh~d~~~G~v~-~~~~~~-~~l~~~~~~~----------G~~--~~p~da~-- 250 (395)
T PRK05967 194 -FRP-LD-----FGVDISIHAATKYPSGHSDILLGTVS-ANEKCW-PQLLEAHGTL----------GLC--AGPDDTY-- 250 (395)
T ss_pred -cCh-hH-----cCCCEEEEecccccCCCCCeeEEEEE-cCHHHH-HHHHHHHHHc----------CCC--CCHHHHH--
Confidence 211 11 2699999999999766544 36444 333211 1111000001 111 1222333
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCC---CCCCHHHHH
Q 010897 332 FIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDS---SAHTVFEIS 392 (498)
Q Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~---~~~~~~~l~ 392 (498)
+...|.+.+..++++..+++..+.+.|++.|.+. ++.+. ...++++|.+++. ......++.
T Consensus 251 l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~ 330 (395)
T PRK05967 251 QILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFL 330 (395)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHH
Confidence 3345667788999999999999999999998763 43331 0246899999632 111234555
Q ss_pred HHHHhcCcEee--------e-ecCCC-----CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 393 EGLRKFGWIVP--------A-YTMPA-----NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 393 ~~L~~~G~~v~--------~-~~~~~-----~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++|.-..+.++ . +.++. .......+|+||+- |+.+.|++||+++++.+
T Consensus 331 ~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 331 DALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFAAA 392 (395)
T ss_pred HhCCcceEccCCCCcceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 55543111100 0 11110 01123589999984 68888899999998764
No 260
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.79 E-value=3.1e-17 Score=164.42 Aligned_cols=350 Identities=19% Similarity=0.188 Sum_probs=188.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhhccCC-CCCcccccccCCChHHHHHHHH---HHhcc-CCCCCcCCcchHHHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVM---ASINK-NYVDMDEYPVTTELQNRCVNMIA 105 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~l~---~~~~~-n~~~~~~~~~~~~le~~~~~~la 105 (498)
.+|+ +.+..++.+.++.+...+.. ..|--.+.++...++.+.+.+. +++.. .++.++.+++..+..-+...+++
T Consensus 42 ~lp~-~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~ 120 (429)
T PF02347_consen 42 NLPE-PLSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMIC 120 (429)
T ss_dssp --------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHH
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 4443 37899999999987765422 2222222333344454555232 22332 24455667788888889999999
Q ss_pred HHcCCCCCCCCCcceeeecChh---HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHH----HHcCCee
Q 010897 106 HLFNTPVADDKTAVGVGTVGSS---EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYFEVEL 178 (498)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~s---ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~----~~~g~~~ 178 (498)
+++|+|.-+ .-.-.+++ ||++++.+..++ ++.+|++|...|+.+...+ ...|+++
T Consensus 121 eLTGmdvaN-----aSlyd~atA~aEa~~ma~r~~~~-------------~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i 182 (429)
T PF02347_consen 121 ELTGMDVAN-----ASLYDGATAAAEAMLMAVRATKR-------------KRNKVLVPESLHPQTRAVLRTYAAPLGIEI 182 (429)
T ss_dssp HHHTSSEE------SEBSSCCHHHHHHHHHHHHHHTT----------------EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred HhhCCCccC-----CCCCChhHHHHHHHHHHHHhccc-------------CCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence 999998411 11122333 333333332211 1358999999999887644 4468899
Q ss_pred EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC
Q 010897 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (498)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~ 258 (498)
+.++++++ ...| ++++.+|++.+||+. |.++++++|.++++++ |.++++ ++---... .+.+
T Consensus 183 v~~~~~~~-~~~d--------~~~~a~v~vq~Pn~~-G~~ed~~~i~~~~h~~------gal~~~-~ad~~aL~-~l~~- 243 (429)
T PF02347_consen 183 VEVPLDED-GTTD--------DDDTAAVMVQNPNTF-GVFEDIKEIADIAHAA------GALVIV-GADPNALG-GLKS- 243 (429)
T ss_dssp EEE-BBTT-CSB---------STTEEEEEEESS-TT-SB--THHHHHHHHHHT------T-EEEE-CGGCCGCC-TC---
T ss_pred EEeccccc-CCcc--------ccCeEEEEeecCCCC-ceEeeHHHHHHHHHHc------CCEEEE-ecCHHHHh-CcCC-
Confidence 99998865 4455 778999999999875 9999999999999999 888887 65422111 1111
Q ss_pred CccccCCCCeeEEEEcCCccCCC-----CCCeEEEEEeCCCCCCcccccc-----cCccC----------------CCCC
Q 010897 259 LEWDFRLPLVKSINVSGHKYGLV-----YAGVGWVVWRTKDDLPDELVFH-----INYLG----------------SDQP 312 (498)
Q Consensus 259 ~~~~~~~~~~dsi~~s~hK~l~~-----p~g~g~~~~~~~~~l~~~~~~~-----~~yl~----------------~~~~ 312 (498)
+.++ ++|++ +..||.++. ++++|++.+++. +.+.++-+ .+--+ ....
T Consensus 244 -Pge~---GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA 316 (429)
T PF02347_consen 244 -PGEY---GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA 316 (429)
T ss_dssp -GGGG---T-SEE-EECCTTTT---CCC-S--EEEEE-GG--GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred -hhhc---CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhhhCCCceecccccccccceeeeccccccccccccch
Confidence 1233 58988 555776544 456788888764 22222111 00001 1111
Q ss_pred CccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHH
Q 010897 313 TFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEIS 392 (498)
Q Consensus 313 ~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~ 392 (498)
+-.+ ||..+..++..+..+..+|.+|++++.+++..+++|+.+.|+++.++. +..+....+|....++ ....++.
T Consensus 317 tSNI-ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~~~~~f~e~v~~~~~~---~~~~~l~ 391 (429)
T PF02347_consen 317 TSNI-CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-FDNPFFFEFVVVFSKD---KEVEELL 391 (429)
T ss_dssp TT----SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-SSSSSBSSEEEEESS----HHHHHHH
T ss_pred hhhh-hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cCCCCceeeeeecCCc---HHHHHHH
Confidence 1111 455455566777888999999999999999999999999999984333 3333234444443321 1222344
Q ss_pred HHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 393 EGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 393 ~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+++...|+... . .....+-+++.+..|++++|+|++.+
T Consensus 392 ~~~~~~gl~~~---~----~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 392 KRGIEGGLNLR---Y----PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HTT----EEEG---G----G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHhcCCCcc---c----cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 44444552221 1 12236889999999999999988754
No 261
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.78 E-value=2.6e-16 Score=161.50 Aligned_cols=321 Identities=13% Similarity=0.054 Sum_probs=196.1
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++....... .......++.+.|+++.+.+ ...++++|++|+..|++.++..+...
T Consensus 56 h~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~-------~~~~~~SGseA~e~Alk~a~~~~~~~-- 124 (396)
T PRK04073 56 HRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLTGKD-------MVLPMNTGAEAVETAIKAARRWAYDV-- 124 (396)
T ss_pred CCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcCCCC-------eEEEcCChHHHHHHHHHHHHHHhhhc--
Confidence 35788889888888764322111 12233345566688877653 28999999999999999886532211
Q ss_pred hcCCCCCCcEEEEc-CCchhHHHHHHHHcCCe------------eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s-~~~h~~~~~~~~~~g~~------------~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
.|.+.++.+|+.. ...|.....+....+-. +..++ + -|++++++++++++++|++..+++
T Consensus 125 -~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~d~~~l~~~i~~~~~~viiep~~~ 197 (396)
T PRK04073 125 -KGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP-----Y-GDLEALKAAITPNTAAFLVEPIQG 197 (396)
T ss_pred -cCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC-----C-CCHHHHHHhcccCeEEEEEcCccC
Confidence 1221223456554 55676655555444421 11222 1 278999999988899898888889
Q ss_pred CcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEE
Q 010897 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (498)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~ 288 (498)
++|.+.| +++|.++|+++ |+++++|++|.++.. .......+..-...|.+++ .|.+..+ ..+|++
T Consensus 198 ~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~--~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~ 267 (396)
T PRK04073 198 EAGINIPPEGFLKAARELCKEE------NVLFIADEIQTGLGR--TGKLFACDWDNVTPDMYIL--GKALGGGVFPISCV 267 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhCCCc--CcHHHHhhhcCCCCCEEEe--cccccCCCCcceEE
Confidence 9999865 88999999999 999999999987531 1100001111112566655 4765444 678988
Q ss_pred EEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
+.+. +.. +.+ .......++ +-+.....+..++|+.+.++ ...++..+++++|.+.|++++ ...+.
T Consensus 268 ~~~~-~i~-~~~-------~~~~~~~t~--~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~-~~~i~ 332 (396)
T PRK04073 268 AANR-DIL-GVF-------TPGSHGSTF--GGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEID-NPMIK 332 (396)
T ss_pred EEcH-HHH-hhh-------cCCCCCCCC--CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhc-CCccc
Confidence 8653 221 111 100111111 11223333333455444333 344666778999999998864 22121
Q ss_pred C-CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 369 K-DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 369 ~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
. ....+++.+.+.. +..++.++|.++|+++.. .+..++|++.....|.++++++++.|++++
T Consensus 333 ~~~~~g~~~~~~~~~----~~~~~~~~l~~~Gv~~~~-------~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 333 EVRGRGLFIGVELNE----PARPYCEALKEEGLLCKE-------THETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ceecceEEEEEEecc----hHHHHHHHHHHCCeEEec-------CCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 1 1134566666632 456899999999988642 123579999776779999999999888765
No 262
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.78 E-value=2.6e-16 Score=161.90 Aligned_cols=333 Identities=14% Similarity=0.058 Sum_probs=198.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.++........+ .......+.+.++++++.+. ..++++|++|+..|+..++..... .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~~~~~~~~---~ 115 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLFGYDK-------VLPMNSGAEAGETALKFARKWGYE---V 115 (400)
T ss_pred CCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh---c
Confidence 46888888888876532211111 12344566677888877643 889999999999999887643211 1
Q ss_pred cCCCCCCcEEE-EcCCchhHHHHHHHHcCCeeEE---EEecCC---ccccCHHHHHHHhh-hCCeEEEEeeccCCccccc
Q 010897 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEVELKE---VKLEEG---YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 148 ~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~~~~---v~~~~~---~~~~d~~~L~~~i~-~~t~~v~~~~~~t~tG~~~ 219 (498)
.|.+.++..|+ +....|.+....+...+..... .+..++ -...|+++|++.+. +++++|++..+.+++|.+.
T Consensus 116 ~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~ 195 (400)
T PTZ00125 116 KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIV 195 (400)
T ss_pred cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCcc
Confidence 22222234454 5556666655555444321110 010000 00148999999996 5788888888889999988
Q ss_pred C----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc-CCCCeeEEEEcCCccCCCCC-CeEEEEEeCC
Q 010897 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYA-GVGWVVWRTK 293 (498)
Q Consensus 220 ~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~-~~~~~dsi~~s~hK~l~~p~-g~g~~~~~~~ 293 (498)
| +++|.++|++| |+++++|++|.++.. ......... ++ ..|.++++ |.+.++. ++|+++.+++
T Consensus 196 ~~~~~l~~l~~l~~~~------~~lli~Dev~~g~g~--~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~ 264 (400)
T PTZ00125 196 PDDGYLKQVYELCKKY------NVLLIVDEIQTGLGR--TGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD 264 (400)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH
Confidence 7 99999999999 999999999976421 110001111 11 24666654 8877664 8899887542
Q ss_pred CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeeC
Q 010897 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT----GRFEILSK 369 (498)
Q Consensus 294 ~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~ 369 (498)
.. +.+. .. ....+ ++.+.....+..++++.+..+++. ++..++.+++.+.|+++ +.+..+.
T Consensus 265 -~~-~~~~--~~-----~~~~t--~~~~~~~~~aa~~~l~~i~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~~- 329 (400)
T PTZ00125 265 -VM-LVIK--PG-----EHGST--YGGNPLACAVAVEALEVLKEEKLA---ENAQRLGEVFRDGLKELLKKSPWVKEIR- 329 (400)
T ss_pred -HH-hhcc--CC-----CCCCC--CCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhcCCCeEEEe-
Confidence 21 1111 00 00111 111123333344555555444443 44445666666666654 3222121
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
+ ...++.+.++.++..+..+++++|.++|+.+.. .+..++|++....++.++++++++.|++++++++.
T Consensus 330 ~-~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~-------~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 330 G-KGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKP-------THDNIIRFAPPLVITKEQLDQALEIIKKVLKSFDS 398 (400)
T ss_pred c-ccEEEEEEEccCcchHHHHHHHHHHHCCeEEee-------cCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 2 344555666432334567899999999987632 12467999987778999999999999998887643
No 263
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=7.1e-16 Score=159.01 Aligned_cols=322 Identities=17% Similarity=0.119 Sum_probs=197.8
Q ss_pred CChHHHHHHHHHHhccCC-CC--CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNY-VD--MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~-~~--~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
+.++++.+++.+++.... .. ......... ...+.+.+++++|.+. .+++++++.|+++++.++ .
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r-~~~~e~~lA~l~Gae~-------a~vv~sgtaAl~l~l~~l-~---- 163 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSR-DRALAALLCALTGAED-------ALVVNNNAAAVLLALNAL-A---- 163 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchH-HHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHh-C----
Confidence 456778888888776532 11 111122222 3367777999999864 778888999998877553 1
Q ss_pred HHHhcCCCCCCcEEEEcCCchhH------HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCC--c
Q 010897 144 KRKEQGKPYDKPNIVTGANVQVC------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL--T 215 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~~------~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~--t 215 (498)
.+++||+++..|+. +...++..|+++++|+.+. ..++++++++|+++|++|++.+++|+ +
T Consensus 164 ---------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~---~t~~~dle~aI~~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 164 ---------AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN---RTHLRDYEQAINENTALLLKVHTSNYRIE 231 (464)
T ss_pred ---------CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC---CCCHHHHHHhcCccCeEEEEEcCCCcccc
Confidence 14689999876652 3345677899999988643 36799999999999999999999997 3
Q ss_pred c--cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccc---cCCCCcccc---CCCCeeEEEEcCCccCCCCCCeEE
Q 010897 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF---LYPDLEWDF---RLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 216 G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~---~~~~~~~~~---~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
| ...|+++|+++|+++ |+++++|+++|.+. ++ ..+. ..++ -..++|++++|+|||+++| .+|+
T Consensus 232 G~~~~~dl~eI~~lak~~------gi~vivD~gsG~l~-~~~~~gl~~-~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~ 302 (464)
T PRK04311 232 GFTKEVSLAELAALGKEH------GLPVVYDLGSGSLV-DLSQYGLPD-EPTVQELLAAGVDLVTFSGDKLLGGP-QAGI 302 (464)
T ss_pred ccCCcCCHHHHHHHHHHc------CCeEEEECCCcccc-cchhccCCC-CCchhhHHhcCCcEEEecCcccccCC-ceEE
Confidence 4 567999999999999 99999999765431 11 0001 1111 1247999999999999887 4788
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhc-----------HHHHHHHHHHHHHHHHHHHH
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----------FEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-----------~~g~~~~~~~~~~~a~~l~~ 356 (498)
++.+++ .+ +.+..++ +... +...+ ..+.++.+.+..+- ...+...+++..++++.+.+
T Consensus 303 i~g~~~-li-~~l~~~~--~~r~-----lr~dk--~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~ 371 (464)
T PRK04311 303 IVGKKE-LI-ARLKKHP--LKRA-----LRVDK--LTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAA 371 (464)
T ss_pred EEEcHH-HH-HHHhhch--hHHH-----Hhcch--HHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHH
Confidence 876542 22 1111100 0000 00001 22233333333221 11133455777778888888
Q ss_pred HHhcCC--C--eEEeeC----------CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 357 GLEKTG--R--FEILSK----------DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 357 ~L~~~~--~--~~~~~~----------~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
.|++.+ + .++... ....+-+++.+.+. +.+..++.++|++...-|.+.. ....+.+-++
T Consensus 372 ~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-~~~~~~l~~~lr~~~~~i~~r~------~~~~~~ld~r 444 (464)
T PRK04311 372 ALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-DRSLEALAARLRLLPPPVIGRI------EDGRLLLDLR 444 (464)
T ss_pred HHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC-CCCHHHHHHHHhcCCCCEEEEE------ECCEEEEEeC
Confidence 888764 2 345533 11245555666433 5788899999997543222211 1122444443
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 010897 423 EDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 423 ~~~t~~~~~~l~~~l~~~l 441 (498)
....++.+.+++.|++++
T Consensus 445 -~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 445 -TLEEEDEERLAAALLEAL 462 (464)
T ss_pred -cCCHHHHHHHHHHHHHHh
Confidence 335567777777776654
No 264
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=1.1e-15 Score=166.43 Aligned_cols=353 Identities=14% Similarity=0.127 Sum_probs=226.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhhccCC-CCCcccccccCCChHHHHHHHHHH---hcc-CCCCCcCCcchHHHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIA 105 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~l~~~---~~~-n~~~~~~~~~~~~le~~~~~~la 105 (498)
.+|+ +.+..++++.++++...+.. ..|--.++.++..++.+.+.+.+- +.. .++.++.+++..+.--+.+.+++
T Consensus 41 ~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~ 119 (939)
T TIGR00461 41 QLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVS 119 (939)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHH
Confidence 4554 56889999999887654322 123234455555567666444321 222 24445556788888889999999
Q ss_pred HHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHH----HHHHcCCeeEEE
Q 010897 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYFEVELKEV 181 (498)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~----~~~~~g~~~~~v 181 (498)
+|+|++..+ .....++|.+.-..+++.+.. .+ ++.+|++++..|+.+.. .+..+|++++.+
T Consensus 120 eLtGm~~aN-----aSl~d~atA~aEa~~~a~~~~-------~~---~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 120 DLTGLPVAN-----ASLLDEGTAAAEAMALSFNVS-------KK---KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHCCChhh-----hhccchhhHHHHHHHHHHHhh-------cC---CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE
Confidence 999999632 334444454433222232211 01 13689999999997663 345778888877
Q ss_pred EecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc
Q 010897 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (498)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~ 261 (498)
+ +++|++.+ ++.+|++..|++ +|.++|+++|.+++|++ |.++++++-.....+ +.+ +.
T Consensus 185 ~---------~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~------gal~~~~ad~~al~l--l~~--Pg 242 (939)
T TIGR00461 185 D---------CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALHSH------KSLVSVAADLMALTL--LTP--PG 242 (939)
T ss_pred c---------HHHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHHHc------CCEEEEEechHHhCC--cCC--HH
Confidence 4 34566555 477777777765 59999999999999999 999999664322211 111 11
Q ss_pred ccCCCCeeEEEEcCCccCC----CCCCeEEEEEeCCCCCCcccccc-----cCccCCCCCCcccc---------------
Q 010897 262 DFRLPLVKSINVSGHKYGL----VYAGVGWVVWRTKDDLPDELVFH-----INYLGSDQPTFTLN--------------- 317 (498)
Q Consensus 262 ~~~~~~~dsi~~s~hK~l~----~p~g~g~~~~~~~~~l~~~~~~~-----~~yl~~~~~~~~l~--------------- 317 (498)
+ -++|++..++++|+. ++++.|++.+++. +.+.++-+ .+-.+...-..+++
T Consensus 243 e---~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~--l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNI 317 (939)
T TIGR00461 243 H---YGADIVLGSSQRFGVPMGYGGPHAAFFAVKDE--YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNI 317 (939)
T ss_pred H---cCCcEEeeCCCccCCCCCCCCCceeeeeecHh--hHhhCCCCceeEEecCCCCccceeecccccccccccccCcch
Confidence 2 268998667777764 3556899888764 22221111 01111000000000
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHh
Q 010897 318 FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 318 ~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
++..+..++.....+..+|.+|++++.++...++.+|.+.|++.| +++..++ .++.+.++++. .+..++.++|.+
T Consensus 318 Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~-fF~~~~v~~~~---~~~~~i~~~~~~ 392 (939)
T TIGR00461 318 CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKT-WFDTLTVKVGN---GISSELLKAAEE 392 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCC-ccceEEEEeCC---CCHHHHHHHHHH
Confidence 122112223333446889999999999999999999999999965 9988763 56777777631 357799999999
Q ss_pred cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 398 FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 398 ~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
+|+.++.. ....+++|+++.+|.++++.|++.+.
T Consensus 393 ~gi~l~~~-------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 393 FNINLRAV-------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCeeeec-------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 99986541 12469999999999999999998884
No 265
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=3.2e-16 Score=160.93 Aligned_cols=336 Identities=17% Similarity=0.087 Sum_probs=199.0
Q ss_pred cCCCCCcccccccC---CC-hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVTT---WM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~~---~~-~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.++.+. ++ +|.+.+++.+.+......... ....++.++.++++++.|.+. ..+|+||++
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~-------v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNL--YYIEPQEELAEKLVELSGMDK-------VFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhcCCCE-------EEECCCcHH
Confidence 56655555543322 23 588888888887653221112 235667788888999877643 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-CCCCcEEEEcCCchhHHHHHH-HHcCCeeE---EEEecCCcc----ccCHHHHHHHh
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGK-PYDKPNIVTGANVQVCWEKFA-RYFEVELK---EVKLEEGYY----VMNPVKAVELV 199 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~-~~~~~~Iv~s~~~h~~~~~~~-~~~g~~~~---~v~~~~~~~----~~d~~~L~~~i 199 (498)
|+.+++.+++... |. ...++.|++...++..+...+ ...+.... ..++.++ + ..|++++++++
T Consensus 108 A~~~al~~a~~~~-------~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~i 179 (396)
T PRK02627 108 ANEAAIKLARKYG-------HKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEG-FIYVPFNDIEALKAAI 179 (396)
T ss_pred HHHHHHHHHHHHh-------cccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCC-ceEeCCCCHHHHHHhc
Confidence 9999999876531 11 011256776665554333322 22222211 1122121 1 12899999999
Q ss_pred hhCCeEEEEeeccCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEc
Q 010897 200 DENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVS 274 (498)
Q Consensus 200 ~~~t~~v~~~~~~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s 274 (498)
.+++++|++..+++++|.. +.+++|.++|+++ ++++++|++|+++.. ....... .++. ..|.+++
T Consensus 180 ~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DE~~~g~g~--~g~~~~~~~~~~-~pdi~t~- 249 (396)
T PRK02627 180 TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDEN------GILLILDEVQTGMGR--TGKLFAYQHYGI-EPDIMTL- 249 (396)
T ss_pred CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhcCCCc--cCceeeehhcCC-CCCEEEE-
Confidence 8888999998888888843 3489999999999 999999999987631 1110000 1121 1354443
Q ss_pred CCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010897 275 GHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAL 354 (498)
Q Consensus 275 ~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l 354 (498)
.|.+.++.++|+++.+++ .. +.+ .......+ ++.+.....+..++++.+..+ +..++..++.+++
T Consensus 250 -sK~~~~G~rig~~~~~~~-~~-~~~-------~~~~~~~t--~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~ 314 (396)
T PRK02627 250 -AKGLGGGVPIGAVLAKEK-VA-DVF-------TPGDHGST--FGGNPLACAAALAVIEIIEEE---GLLENAAEVGEYL 314 (396)
T ss_pred -cchhhCCcccEEEEEcHH-HH-hcc-------CCCCCCCC--CCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 476667788999986532 21 111 10000111 112222333333444433332 3445555566666
Q ss_pred HHHHhcC----CCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHH
Q 010897 355 REGLEKT----GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLV 430 (498)
Q Consensus 355 ~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~ 430 (498)
.+.|.++ +.+..+. . ...++.+.+. .+..+++++|.++|+.+... +..++|++.....+.+++
T Consensus 315 ~~~l~~~~~~~~~~~~~~-~-~g~~~~i~~~----~~~~~~~~~l~~~Gv~v~~~-------~~~~lRi~~~~~~~~~~i 381 (396)
T PRK02627 315 RAKLRELLEKYPGIKEVR-G-LGLMIGIELD----RPAAEIVKKALEKGLLINVT-------GDNVLRLLPPLIISKEEI 381 (396)
T ss_pred HHHHHHHHHhCCCeeeec-c-CcEEEEEEec----CcHHHHHHHHHHCCeEEeec-------CCCEEEEECCcccCHHHH
Confidence 6655543 3222121 1 3456666662 25678999999999887432 235699987666799999
Q ss_pred HHHHHHHHHHHHH
Q 010897 431 ERLISHIEEVLKE 443 (498)
Q Consensus 431 ~~l~~~l~~~l~~ 443 (498)
+++++.|++++++
T Consensus 382 ~~~~~~l~~~l~~ 394 (396)
T PRK02627 382 DEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 266
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.2e-16 Score=147.32 Aligned_cols=327 Identities=16% Similarity=0.105 Sum_probs=217.6
Q ss_pred cCCChHHHHHHHHHHhccCCCCCcCCc---chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~~~n~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
....+|++.++-..++.+....+.+.. ++..+.+.+...+|++.+-++ .+...++-.||+-++.+++++
T Consensus 79 GLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED-------~ilypscfdANag~feail~p- 150 (417)
T KOG1359|consen 79 GLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED-------TILYPSCFDANAGAFEAILTP- 150 (417)
T ss_pred cccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc-------eEEeccccccchHHHHHhcCh-
Confidence 334578888888888877655554443 778888889999999988875 666666777777667666554
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC---CeEEEEeeccCC-ccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTL-TGE 217 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~---t~~v~~~~~~t~-tG~ 217 (498)
++-|+-.+..|.++....+++. ....+|+-.++..+.++ ..-++++.+-.+ .|.
T Consensus 151 ------------edAvfSDeLNhASIIdGirLck----------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGd 208 (417)
T KOG1359|consen 151 ------------EDAVFSDELNHASIIDGIRLCK----------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGD 208 (417)
T ss_pred ------------hhhhhccccccchhhhhhHHHh----------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCC
Confidence 2456667788988887766654 12457777777666542 233556666555 699
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC-CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l 296 (498)
+.|+++|.+|+++| |.++++|++|+.++...........++ ...+|.++....|.+++-.| |+. ..+..+
T Consensus 209 iaPl~ei~~La~kY------gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyt--tgp~~l 279 (417)
T KOG1359|consen 209 IAPLEEISQLAKKY------GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYT--TGPKPL 279 (417)
T ss_pred cccHHHHHHHHHhc------CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCc--cCChhH
Confidence 99999999999999 999999999988753221111122233 34589999999998764332 322 222222
Q ss_pred Cccccc-ccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccE
Q 010897 297 PDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPL 375 (498)
Q Consensus 297 ~~~~~~-~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (498)
...++. .-+|+.+. +-++..+-....++..+-. -...+.+...+.+++++..+.-| |++.+. ..|+
T Consensus 280 i~llrqr~RpylFSn--------slppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aG-ftIsg~--~hPI 346 (417)
T KOG1359|consen 280 ISLLRQRSRPYLFSN--------SLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAG-FTISGA--SHPI 346 (417)
T ss_pred HHHHHhcCCceeecC--------CCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcC-ceecCC--CCCc
Confidence 222211 12444432 2221111111122222211 13455666778888999888876 998765 3455
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 376 VAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
...-+-+ ..-..++++.|.++|+.+.++.+|....+...+||.+...+|++++|++++++.++.+.+.
T Consensus 347 ~pv~lGd--a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 347 CPVMLGD--ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred cceeccc--HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 5554422 2235688899999999999999999889999999999999999999999999998876543
No 267
>PLN02452 phosphoserine transaminase
Probab=99.76 E-value=4e-16 Score=156.60 Aligned_cols=330 Identities=15% Similarity=0.079 Sum_probs=212.1
Q ss_pred cCCChHHHHHHHHHHh-ccC---CC---CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 010897 65 TTWMEPECDKLVMASI-NKN---YV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (498)
Q Consensus 65 ~~~~~~~~~~~l~~~~-~~n---~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~ 137 (498)
|...++.+.+.+..-+ +-+ .. ....++...++-+++++.|.++++.|.+. ....+..|||.++-.++..+
T Consensus 15 P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y---~v~~l~Gsgt~~~ea~~~nl 91 (365)
T PLN02452 15 PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY---EVLFLQGGASTQFAAIPLNL 91 (365)
T ss_pred CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEeCccHHHHHHHHHhc
Confidence 3344666666665442 211 11 11235567788889999999999997532 23444456676665555444
Q ss_pred HHHHHHHHHhcCCCCCCcEE-EEcCCchh-HHHHHHHHcCCeeEEEEecCCcc--ccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 138 KRKWQQKRKEQGKPYDKPNI-VTGANVQV-CWEKFARYFEVELKEVKLEEGYY--VMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~I-v~s~~~h~-~~~~~~~~~g~~~~~v~~~~~~~--~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
..+ +.++ ++..-.|. -+.+.|+.+|...+.....+..+ ..|+++++ .+++...|.+++..|
T Consensus 92 ~~~-------------~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnET 156 (365)
T PLN02452 92 CKP-------------GDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANET 156 (365)
T ss_pred CCC-------------CCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCC
Confidence 321 2334 34333333 45566777886433332222212 45666652 244678899999999
Q ss_pred Cccc-ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeC
Q 010897 214 LTGE-FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (498)
Q Consensus 214 ~tG~-~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~ 292 (498)
.||. +.|++++. +++++||++++.+..|+ |+...++|+ .++||.+ +|+|+|++++|.
T Consensus 157 stGv~~~~~~~i~------------~~~lvVDa~Ss~g~~pi-------dv~~~~v~~--~saqK~l-GP~Gl~~v~vr~ 214 (365)
T PLN02452 157 IHGVEFKDYPDVG------------NVPLVADMSSNFLSKPV-------DVSKYGVIY--AGAQKNV-GPSGVTIVIIRK 214 (365)
T ss_pred CCcEecCcccccC------------CCeEEEECCccccCccc-------CHHHcCEEE--Eeccccc-CCCCeEEEEEcH
Confidence 9999 58876653 47999999998776544 222123444 6999987 599999999986
Q ss_pred CCCCCcccccccCccCCC--CCCccccCCCchHHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEe-e
Q 010897 293 KDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEIL-S 368 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~--~~~~~l~~sr~~~~~~a~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~ 368 (498)
+.. .......+.|+... .....+.+|.+...+.++..+++.+..+ |+..+.++..+++++|.+.|++.++|... .
T Consensus 215 ~~l-~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~ 293 (365)
T PLN02452 215 DLI-GNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPV 293 (365)
T ss_pred HHH-hhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 532 11111122232211 0111233677778888999999988776 89999999999999999999998767211 1
Q ss_pred C-C-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 369 K-D-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 369 ~-~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+ . .+..+|+|++++. ....++.+.+.++|++.... ... .+-+|+++-+..+.+++++|++.|++.-+
T Consensus 294 ~~~~rs~~~vsF~~~~~--~~~~~f~~~~~~~g~~~~~G----~r~-~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 294 EKSVRSLMNVPFTLGGS--ELEAEFVKEAAKAGMVQLKG----HRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred ChHHhCCeEEEEEcCCc--hhHHHHHHHHHHCCCcccCC----ccc-cCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 1 1 1346899998653 25679999999999875321 111 12299999889999999999988887754
No 268
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.76 E-value=5.3e-17 Score=162.95 Aligned_cols=266 Identities=15% Similarity=0.108 Sum_probs=172.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
+..+.+|++||.+. .-.+++|+|.+|..++.++.++ ++.|+++..+|-|+..++.+.|+.+
T Consensus 70 eAe~~aA~~fGAd~------t~flvnGsT~g~~a~i~a~~~~-------------gd~VLv~RN~HkSv~~alil~ga~P 130 (417)
T PF01276_consen 70 EAEELAARAFGADK------TFFLVNGSTSGNQAMIMALCRP-------------GDKVLVDRNCHKSVYNALILSGAIP 130 (417)
T ss_dssp HHHHHHHHHHTESE------EEEESSHHHHHHHHHHHHHTTT-------------TCEEEEETT--HHHHHHHHHHTEEE
T ss_pred HHHHHHHHhcCCCe------EEEEecCchHHHHHHHHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCCeE
Confidence 45566999999975 3677789999998888887653 5799999999999999999999999
Q ss_pred EEEEecCCc----cccCH-----HHHHHHhhhCC--eE---EEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 179 KEVKLEEGY----YVMNP-----VKAVELVDENT--IC---VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 179 ~~v~~~~~~----~~~d~-----~~L~~~i~~~t--~~---v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
++++...+. +.+++ +.++++|++++ +. |++++||. .|.+.|+++|+++|+++ +++|+||
T Consensus 131 vyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~------~~~llvD 203 (417)
T PF01276_consen 131 VYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKH------GIPLLVD 203 (417)
T ss_dssp EEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCT------ECEEEEE
T ss_pred EEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhccc------CCEEEEE
Confidence 999885221 24556 99999998653 34 88888855 59999999999999999 9999999
Q ss_pred cCcccccccccCCCCccccCCCCee-------EEEEcCCccCCCCCCeEEEEEeCCCCC-CcccccccCccCCCCCCccc
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVK-------SINVSGHKYGLVYAGVGWVVWRTKDDL-PDELVFHINYLGSDQPTFTL 316 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~d-------si~~s~hK~l~~p~g~g~~~~~~~~~l-~~~~~~~~~yl~~~~~~~~l 316 (498)
+|||... +|. +-.. ..-.-++| .++.|.||.+.+-...+++.+++...+ .+.+......+.+
T Consensus 204 EAhGah~-~F~-~lp~-~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T------- 273 (417)
T PF01276_consen 204 EAHGAHF-GFH-PLPR-SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT------- 273 (417)
T ss_dssp -TT-TTG-GCS-GGGT-TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS--------
T ss_pred ccccccc-cCC-CCcc-chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC-------
Confidence 9998764 343 2221 11112466 999999999999999999999886422 1111111111222
Q ss_pred cCCCchHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEeeCCC--Ccc----------------
Q 010897 317 NFSKGSSQIIAQYYQFIRL-GFEGYKNIMENCMGNARALREGL---EKTGRFEILSKDV--GVP---------------- 374 (498)
Q Consensus 317 ~~sr~~~~~~a~~~~l~~l-g~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~~~~~~~--~~~---------------- 374 (498)
.|++...+..+=.+.+.+ +.+| ++.+++..++++.+++.| .++..|.++.++. ..+
T Consensus 274 -TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~ 351 (417)
T PF01276_consen 274 -TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGL 351 (417)
T ss_dssp -SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT-
T ss_pred -CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhc
Confidence 233223334444555555 3444 567788888888898888 6677777765431 000
Q ss_pred ---E-------EEEEecC--------CCCCCHHHHHHHHHhcCcEe
Q 010897 375 ---L-------VAFSLKD--------SSAHTVFEISEGLRKFGWIV 402 (498)
Q Consensus 375 ---~-------v~f~~~~--------~~~~~~~~l~~~L~~~G~~v 402 (498)
. +.+..++ ..+++...+.+.|+++||.+
T Consensus 352 ~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~ 397 (417)
T PF01276_consen 352 ADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQV 397 (417)
T ss_dssp -TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-
T ss_pred ccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEE
Confidence 1 2222221 23577889999999998765
No 269
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=2.2e-17 Score=149.73 Aligned_cols=281 Identities=14% Similarity=0.134 Sum_probs=201.8
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHH
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~ 198 (498)
.++...|+.|.+-+.+++...+ ++.+|+.-.+++..|.-.|..-+++++.||++++ |++|.|++.+.
T Consensus 88 nic~GvGsDE~ID~iiR~~c~P------------GkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pd-F~lnvdai~ev 154 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDP------------GKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPD-FSLNVDAIAEV 154 (375)
T ss_pred ceEEecCcHHHHHHHHhheecC------------CccceeecCCcceeEEEEeecCCceEEEecCCCC-ccccHHHHHHH
Confidence 3888999999999888887654 2468999999999888888899999999999986 99999999998
Q ss_pred hhh--CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCC
Q 010897 199 VDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (498)
Q Consensus 199 i~~--~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~h 276 (498)
+.. .++++++|+|+||||.+-..+.|.++++-- . +.+++||+||-.|.. ......|--.+++..++..-++
T Consensus 155 l~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p-~----nglVVvDEAYidFsg--~~S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 155 LELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMP-D----NGLVVVDEAYIDFSG--VESRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred HhccccceEEEEcCCCCCCcccccHHHHHHHHhCC-C----CcEEEEeeeeEeecc--ccccchHhHhCCceeehhhhhh
Confidence 864 478999999999999998888888887543 2 789999999988753 2233444456788888888888
Q ss_pred ccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH---HHHHHHHHHHHHHHHH
Q 010897 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EGYKNIMENCMGNARA 353 (498)
Q Consensus 277 K~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~---~g~~~~~~~~~~~a~~ 353 (498)
.+|+++.++|+.++.-+ . ..|+......+.+ +..+-.++|.++.+ ..++.......+.+.+
T Consensus 228 sfGLAGiRvG~~~~~~~-i--------a~iln~~KaPYNi-------S~~~s~~AL~Als~~n~kkme~~rdaiv~er~R 291 (375)
T KOG0633|consen 228 SFGLAGIRVGYGAFPLS-I--------AEILNRAKAPYNI-------SVAGSVAALAALSDSNGKKMEDVRDAIVRERER 291 (375)
T ss_pred hcCcceeEeecccccHH-H--------HHHHHhccCCccc-------cchhHHHHHHhcCcccchHHHHHHHHHHHHHHH
Confidence 89999999998764321 1 1233333223322 11222344444442 3355666777788899
Q ss_pred HHHHHhcCCCeEEeeCCCCccEEEEEecCCC-CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHH
Q 010897 354 LREGLEKTGRFEILSKDVGVPLVAFSLKDSS-AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
|..+|.+++++.-+..+...||+.+++.+.+ +++.....+.+.+.|++++-+... ..-.+++|++++ |.|+.+.
T Consensus 292 L~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse--~~c~G~lRitvG---t~Eentv 366 (375)
T KOG0633|consen 292 LFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSE--EGCKGYLRITVG---TPEENTV 366 (375)
T ss_pred HHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCc--cccceeEEEEcC---CcccchH
Confidence 9999999986553333347899999986532 233334444455678887644321 123578999998 8899988
Q ss_pred HHHHHHHH
Q 010897 433 LISHIEEV 440 (498)
Q Consensus 433 l~~~l~~~ 440 (498)
|++.++++
T Consensus 367 L~k~~K~~ 374 (375)
T KOG0633|consen 367 LMKCLKQF 374 (375)
T ss_pred HHHHHHhh
Confidence 88877765
No 270
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.75 E-value=1e-15 Score=143.45 Aligned_cols=306 Identities=15% Similarity=0.089 Sum_probs=218.0
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch-----h
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-----V 165 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h-----~ 165 (498)
+....+-..+-..++.++|...++ .+++.+.|--++-.+.++.+. + .+..||+++..- +
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~E-----vvv~dtts~nl~k~L~aalr~-~----------~~r~vIv~E~~~fpTdly 135 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAGE-----VVVTDTTSINLFKVLAAALRP-Q----------EGRRVIVSEGDNFPTDLY 135 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCCc-----eEEeCCcchHHHHHHHHHhcc-C----------CCceEEeecCCCCCcchh
Confidence 344555568889999999998643 566655554444444444432 1 134677766433 3
Q ss_pred HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
..+..|++++.. ..+ ...++|+++++++++++..|++++.+..||.+.|+.+|..+++++ ++++.-|-
T Consensus 136 ~a~g~~~~~~~~---~~~---~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~------galv~wDL 203 (407)
T COG3844 136 IAEGLADLLGIG---YDL---EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH------GALVGWDL 203 (407)
T ss_pred hhcchhhhhccc---ccc---eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhc------CceEEeeh
Confidence 444566777765 111 146788999999999999999999999999999999999999999 99999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe-EEEEEeCCCCCCcccccccCccCCCCCC-----c-----
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV-GWVVWRTKDDLPDELVFHINYLGSDQPT-----F----- 314 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~-g~~~~~~~~~l~~~~~~~~~yl~~~~~~-----~----- 314 (498)
||+.+..|. ++.-.++|+-+.++|||+.+++|. +++++.++ ......+.-..|.+...+. |
T Consensus 204 AHsaGavp~-------~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~g 275 (407)
T COG3844 204 AHSAGAVPV-------DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPG 275 (407)
T ss_pred hcccCCcce-------eecccCCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCcc
Confidence 998877554 333457999999999999988875 55655443 3333334444566543211 0
Q ss_pred ---cccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCC---CccEEEEEecCCCC
Q 010897 315 ---TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDV---GVPLVAFSLKDSSA 385 (498)
Q Consensus 315 ---~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~---~~~~v~f~~~~~~~ 385 (498)
-+.++.+...+.++..+|..+.+-++.+..++...+++++.+.++..- ++++..+.. +..-|+|..+
T Consensus 276 a~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---- 351 (407)
T COG3844 276 ARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---- 351 (407)
T ss_pred ccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC----
Confidence 023455556677788888888888899999999999999999998642 478876632 5678888874
Q ss_pred CCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC-CCCHHHHHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE-DFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~-~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.+++.+.|.++|++.. + ....+||+.+.+ .++-.++=.-++.|+++++.+
T Consensus 352 -~~~~V~qaLi~rGVigD-~------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 352 -HGYQVMQALIDRGVIGD-F------REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -cHHHHHHHHHHcCcccc-c------cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 46799999999998742 1 334679999876 456677766677777777653
No 271
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=2.3e-15 Score=154.15 Aligned_cols=323 Identities=12% Similarity=0.004 Sum_probs=188.3
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++.......+ ......++.+.|+++.+.+ .+.+++||++|+..|+++++.-...
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~~~al~~ar~~~~~---- 114 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVSNLY--RIPEQERLAERLVENSFAD-------KVFFTNSGAEAVECAIKTARRYHYG---- 114 (389)
T ss_pred CCHHHHHHHHHHHHhcCcccccc--CChHHHHHHHHHHhhCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHh----
Confidence 46888888888887532211111 2233445666677776443 2999999999999999988653211
Q ss_pred cCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEE----EecCCccc----cCHHHHHHHhhhCCeEEEEeeccCCcccc-
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV----KLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEF- 218 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v----~~~~~~~~----~d~~~L~~~i~~~t~~v~~~~~~t~tG~~- 218 (498)
.|.. ++.+|++.+..|..+...+...+...... |..+ ++. .|++++++++++++++|++...++++|..
T Consensus 115 ~G~~-~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 115 KGHP-ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVP-GFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRP 192 (389)
T ss_pred cCCC-CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCC-CceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcC
Confidence 1211 23477777665554443333333322211 1111 122 58999999998888888888777777733
Q ss_pred ---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+.+++|.++|++| |+++++|++|.|+.. ...-... .+++ ..|.+ +..|.+.++..+|+++.+++
T Consensus 193 ~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~- 260 (389)
T PRK01278 193 APDEFLKGLRQLCDEN------GLLLIFDEVQCGMGR--TGKLFAHEWAGV-TPDIM--AVAKGIGGGFPLGACLATEE- 260 (389)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCcceeecccCC-CCCEE--EEehhccCCcceEEEEEcHH-
Confidence 5799999999999 999999999987531 1110010 1121 13544 34677766677999887543
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeeC-
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSK- 369 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~- 369 (498)
.. +.+ .......+ ++-+.....+..++|..+..+++ .++..++.+++.+.|++ .++ ++..
T Consensus 261 ~~-~~~-------~~~~~~~t--~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~--~~~~v 325 (389)
T PRK01278 261 AA-KGM-------TPGTHGST--YGGNPLAMAVGNAVLDVILAPGF---LDNVQRMGLYLKQKLEGLVDRFPD--VIEEV 325 (389)
T ss_pred HH-hcc-------CCCCCCCC--CCccHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHHHhhCCC--ceeeE
Confidence 11 111 11111111 22222333444445555533333 34445555555555544 332 1211
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.....++.+.+.. +..+++++|.++|+.+... +..++|++.....+.++++++++.|+++++.
T Consensus 326 ~g~G~~~~i~~~~----~~~~~~~~l~~~GV~~~p~-------~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 326 RGKGLLLGLKCVV----PNRDLVQALRDEGLLTVGA-------GDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred ecccEEEEEEEec----CHHHHHHHHHHCCeEEeec-------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 1122344445521 4678999999999875321 2357999976667899999999998888754
No 272
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.74 E-value=1.6e-15 Score=152.75 Aligned_cols=318 Identities=12% Similarity=0.118 Sum_probs=202.4
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~ 166 (498)
|..+|...++|++ +++++|.+. .+.|++|+.|+.++..+..+ .+++| +.++|++
T Consensus 67 yag~~s~~~lE~~----va~~~G~~~-------av~v~sGT~Al~ll~~l~l~-------------pGDeV--psn~~f~ 120 (450)
T TIGR02618 67 YAGSRNFYHLERT----VRELYGFKY-------VVPTHQGRGAENLLSQIAIK-------------PGDYV--PGNMYFT 120 (450)
T ss_pred hcCCCcHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHhCCC-------------CcCEE--CCceeHH
Confidence 5667777778776 888899975 99999999997654322111 13444 7788876
Q ss_pred HHHH-HHHcCCeeEEEEec---------CCccccCHHHHHHHhhhC----CeEEEEeeccCCc-ccc---cCHHHHHHHH
Q 010897 167 WEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAILGSTLT-GEF---EDVKLLHDLL 228 (498)
Q Consensus 167 ~~~~-~~~~g~~~~~v~~~---------~~~~~~d~~~L~~~i~~~----t~~v~~~~~~t~t-G~~---~~l~~I~~la 228 (498)
...+ ..+.|+.+..++.+ +.++.+|+++|+++|+++ +.+|+++.++|.. |.. +++++|.++|
T Consensus 121 Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA 200 (450)
T TIGR02618 121 TTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELC 200 (450)
T ss_pred HHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHH
Confidence 6665 68888866666443 335789999999999863 4467777777765 677 6789999999
Q ss_pred HHhhcccCCCceEEEecCcccccccccC-------CCCcccc---CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 229 TKKNEETGWDTPIHVDAASGGFIAPFLY-------PDLEWDF---RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 229 ~~~~~~~~~~~~l~vD~A~~g~~~~~~~-------~~~~~~~---~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
+++ |++||.|+|....-+-|+. ....++. -...+|++++|+||-+++|.| |++.+++++...+
T Consensus 201 ~~~------Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k 273 (450)
T TIGR02618 201 EAH------GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQS 273 (450)
T ss_pred HHc------CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHH
Confidence 999 9999999998653221211 1011110 134689999999999999986 6666687655433
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
.......| ++. .++ |.-.+..+.++..+|...-+. ...++....+++|.+.|.+.| +.++.+. +.+.|.+
T Consensus 274 ~r~~~~~~-eG~-~ty---Ggla~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~G-vpv~~p~-ggh~V~v 343 (450)
T TIGR02618 274 AKELVVVF-EGM-PSY---GGLAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAAG-VPIVEPV-GGHAVFL 343 (450)
T ss_pred HHHHhhhc-CCc-ccc---CchhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHCC-CcccCCC-CcceEEE
Confidence 32222333 221 121 121122334444455333222 455666778999999999985 8886554 6777777
Q ss_pred Eec------CCCCCCHHHHHHHHHhc-CcE---eeeec---CCCCC----CCeeEEEEeec-CCCCHHHHHHHHHHHHHH
Q 010897 379 SLK------DSSAHTVFEISEGLRKF-GWI---VPAYT---MPANA----ENVAVLRVVVR-EDFSRSLVERLISHIEEV 440 (498)
Q Consensus 379 ~~~------~~~~~~~~~l~~~L~~~-G~~---v~~~~---~~~~~----~~~~~lRv~v~-~~~t~~~~~~l~~~l~~~ 440 (498)
+.. +...+....|+..|... |+- +-... -|... .....+|+++- .-.|.+.+|...+.|..+
T Consensus 344 da~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 344 DARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred EhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 643 12345667888777653 331 11111 11111 11367899983 456888888888888887
Q ss_pred HHHHHcC
Q 010897 441 LKEIESL 447 (498)
Q Consensus 441 l~~l~~~ 447 (498)
.+.-+..
T Consensus 424 ~~~~~~~ 430 (450)
T TIGR02618 424 YKHRDDI 430 (450)
T ss_pred HhhHhhc
Confidence 7665444
No 273
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=1.5e-15 Score=156.44 Aligned_cols=294 Identities=17% Similarity=0.103 Sum_probs=189.5
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|....+|+ .||++.|.+. .++++||+.|+.+++.++.++ ++.|+++.+.|..+...
T Consensus 83 Pt~~~Le~----~lA~leg~~~-------~iv~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~p~Y~~~~~~ 138 (427)
T PRK07049 83 PNSEIVED----RLAVYEGAES-------AALFSSGMSAIATTLLAFVRP-------------GDVILHSQPLYGGTETL 138 (427)
T ss_pred cCHHHHHH----HHHHHhCCCc-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHHH
Confidence 34445554 4888888653 888899999998888777543 47899999999887665
Q ss_pred H----HHcCCeeEEEEecCCccccCHHHHHHHhh-----hCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceE
Q 010897 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVD-----ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (498)
Q Consensus 171 ~----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-----~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l 241 (498)
+ +.+|++++.++ + ..|++++++++. ++|++|+++.|+||||.+.|+++|.++++..++.+..++++
T Consensus 139 ~~~~l~~~Gi~~v~~~--~---~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~v 213 (427)
T PRK07049 139 LAKTFRNFGVGAVGFA--D---GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPII 213 (427)
T ss_pred HHHHHHhcCcEEEEEe--C---CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEE
Confidence 3 45788866665 2 156777777764 46899999999999999999999999998821100018999
Q ss_pred EEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC--CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCC
Q 010897 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFS 319 (498)
Q Consensus 242 ~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p--~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~s 319 (498)
+||++|.++.. ...+ . .++|.+..|..|++.+. ..+|+++. +++.. +.+......++.
T Consensus 214 vvDety~~~~~---~~pl----~-~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~-~~l~~~~~~~g~---------- 273 (427)
T PRK07049 214 ACDNTLLGPVF---QKPL----E-HGADLSVYSLTKYVGGHSDLVAGAVLG-RKALI-RQVRALRSAIGT---------- 273 (427)
T ss_pred EEECCcccccc---CCcc----c-cCCCEEEEcCceeecCCCCcEEEEEEC-CHHHH-HHHHHHHHhcCC----------
Confidence 99999876531 1111 1 14688888999998853 45687763 33221 211111111111
Q ss_pred CchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC-----------------CCccEEEEEec
Q 010897 320 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD-----------------VGVPLVAFSLK 381 (498)
Q Consensus 320 r~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~-----------------~~~~~v~f~~~ 381 (498)
......+|+.++.+ +.+..++++..++++.+.+.|++.|.++ ++.+. ...++++|.++
T Consensus 274 --~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~ 349 (427)
T PRK07049 274 --QLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIK 349 (427)
T ss_pred --CCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEc
Confidence 12334566666555 3567888888999999999999998764 33221 02458999986
Q ss_pred CCCCCCHHHHHHHHHhcCcEee-----e-ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 382 DSSAHTVFEISEGLRKFGWIVP-----A-YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 382 ~~~~~~~~~l~~~L~~~G~~v~-----~-~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+. .....++.+.|.--.+.++ + .+.|.. .-..+.+|+||+- |+.+.|++||++++
T Consensus 350 ~~-~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 424 (427)
T PRK07049 350 GG-QAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQAL 424 (427)
T ss_pred CC-HHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHH
Confidence 42 1123456665543221110 0 001110 1124689999984 78888899999888
Q ss_pred H
Q 010897 442 K 442 (498)
Q Consensus 442 ~ 442 (498)
+
T Consensus 425 ~ 425 (427)
T PRK07049 425 D 425 (427)
T ss_pred h
Confidence 5
No 274
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.74 E-value=1.1e-15 Score=154.01 Aligned_cols=289 Identities=22% Similarity=0.173 Sum_probs=187.0
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
|....+|+. |+++.|... +..+++|..|+..++.++.+. ++.|+++...|......
T Consensus 55 Pt~~~le~~----la~Le~g~~-------a~~~~SGmaAi~~~l~~ll~~-------------Gd~iv~~~~~Y~~t~~~ 110 (386)
T PF01053_consen 55 PTVRALEQR----LAALEGGED-------ALLFSSGMAAISAALLALLKP-------------GDHIVASDDLYGGTYRL 110 (386)
T ss_dssp HHHHHHHHH----HHHHHT-SE-------EEEESSHHHHHHHHHHHHS-T-------------TBEEEEESSSSHHHHHH
T ss_pred ccHHHHHHH----HHHhhcccc-------eeeccchHHHHHHHHHhhccc-------------CCceEecCCccCcchhh
Confidence 455555555 888888754 788889999998888887553 47899988877755544
Q ss_pred H----HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCC-ceEEEec
Q 010897 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVDA 245 (498)
Q Consensus 171 ~----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~-~~l~vD~ 245 (498)
+ ..+|+++..++. -|+++++++++++|++|++-.|+||+..+.|+++|+++|+++ | ++++||.
T Consensus 111 ~~~~l~~~gv~v~~~d~------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~------g~~~~vVDn 178 (386)
T PF01053_consen 111 LEELLPRFGVEVTFVDP------TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEH------GDILVVVDN 178 (386)
T ss_dssp HHHCHHHTTSEEEEEST------TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHT------TT-EEEEEC
T ss_pred hhhhhcccCcEEEEeCc------hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHh------CCceEEeec
Confidence 4 446888877753 479999999999999999999999999999999999999999 7 9999999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe--EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchH
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~--g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~ 323 (498)
.++..+ ....+ . .++|++.-|..||+.+...+ |.+++++.+.+...+......+|.. .
T Consensus 179 T~atp~---~~~pL--~---~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~------------~ 238 (386)
T PF01053_consen 179 TFATPY---NQNPL--E---LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT------------L 238 (386)
T ss_dssp TTTHTT---TC-GG--G---GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B-------------
T ss_pred ccccee---eeccC--c---CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc------------c
Confidence 998753 22111 2 25999999999999766553 6666555222212111111112211 1
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCC
Q 010897 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHT 387 (498)
Q Consensus 324 ~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~ 387 (498)
.....|..+ .|...+..++++..+++..+.+.|++.|.++ |..+. ...++++|.+++.. ..
T Consensus 239 ~p~da~ll~--rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~-~~ 315 (386)
T PF01053_consen 239 SPFDAWLLL--RGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE-EA 315 (386)
T ss_dssp -HHHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-HH
T ss_pred hHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-hh
Confidence 223334333 4667788999999999999999999999876 44431 13469999996521 13
Q ss_pred HHHHHHHHHhc--CcEeee----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 388 VFEISEGLRKF--GWIVPA----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 388 ~~~l~~~L~~~--G~~v~~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
...+.+.|+-- |..+-+ ...|.. .-....+|+||+- |+.+.|++||+++++
T Consensus 316 ~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 316 ARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 45666666432 110000 001110 1223689999984 788888999998874
No 275
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.74 E-value=1.9e-15 Score=155.41 Aligned_cols=290 Identities=16% Similarity=0.104 Sum_probs=180.1
Q ss_pred CChHHHHHHHHHHhccCC-C--CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNY-V--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
+.++.+.+++.+++.... . ++...... .....+.+.+++++|.+. .+++++++.|+.+++.++ .
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g-~r~~~le~~lA~l~gae~-------alvv~sg~aAi~l~l~~l-~---- 158 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRG-SRYSHVEGLLCELTGAED-------ALVVNNNAAAVLLALNTL-A---- 158 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccc-hHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHh-C----
Confidence 456788888887776422 1 11111112 223567778999999975 567788888987777443 1
Q ss_pred HHHhcCCCCCCcEEEEcCCchh------HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc--
Q 010897 144 KRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-- 215 (498)
Q Consensus 144 ~~~~~g~~~~~~~Iv~s~~~h~------~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t-- 215 (498)
.+++||+++..|. ++...++..|++++.++.+. ..|+++++++|+++|++|++.+.+|++
T Consensus 159 ---------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~---~~~l~dle~aI~~~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 159 ---------KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN---RTHLKDYEDAITENTALLLKVHTSNYRIV 226 (454)
T ss_pred ---------CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---CCCHHHHHHhcCcCCEEEEEEccCccccc
Confidence 1468999987764 33446677899999987643 368999999999999999999999984
Q ss_pred c--cccCHHHHHHHHHHhhcccCCCceEEEecCcccccc--cccCCCCc--cccCCCCeeEEEEcCCccCCCCCCeEEEE
Q 010897 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (498)
Q Consensus 216 G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~--~~~~~~~~--~~~~~~~~dsi~~s~hK~l~~p~g~g~~~ 289 (498)
| ...|+++|+++|+++ |++++||++.|.+.. +|..+..+ .+....++|.+++|+|||+++|. .|+++
T Consensus 227 G~~~~~dl~~I~~la~~~------g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~ 299 (454)
T TIGR00474 227 GFTEEVSIAELVALGREH------GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIV 299 (454)
T ss_pred CCCCCCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEE
Confidence 6 578999999999999 999999987654310 01111111 11222469999999999998874 78887
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH-----------hcHHHHHHHHHHHHHHHHHHHHHH
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-----------LGFEGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~-----------lg~~g~~~~~~~~~~~a~~l~~~L 358 (498)
.+++ .+ +.+..++ +..... ..+ ..+.++...+.. -+...+...+++..+++..+.+.|
T Consensus 300 g~~~-~i-~~l~~~~-l~r~lr------~~k--~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L 368 (454)
T TIGR00474 300 GKKE-LI-ERLKKNP-LTRALR------VDK--LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRL 368 (454)
T ss_pred ECHH-HH-Hhhhhch-hHHHHh------hCh--HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHH
Confidence 6642 22 1111110 100000 000 011111122211 122333445667777888888888
Q ss_pred hcC--CC--eEEeeCC--------C--CccEEEEEecCCCCCCHHHHHHHHHhcCc
Q 010897 359 EKT--GR--FEILSKD--------V--GVPLVAFSLKDSSAHTVFEISEGLRKFGW 400 (498)
Q Consensus 359 ~~~--~~--~~~~~~~--------~--~~~~v~f~~~~~~~~~~~~l~~~L~~~G~ 400 (498)
++. ++ .++.... + ..+-+++.+.+. +.+..++.++|++...
T Consensus 369 ~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~-~~~~~~l~~~lr~~~~ 423 (454)
T TIGR00474 369 KAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPD-GLSAEKLEARLRELPP 423 (454)
T ss_pred HhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-CCCHHHHHHHHhcCCC
Confidence 774 33 3454432 1 244555555432 5678899999997663
No 276
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.73 E-value=2.6e-15 Score=154.34 Aligned_cols=323 Identities=15% Similarity=0.073 Sum_probs=196.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++....... .......++.+.|++++|.+. ..++++|++|+..|+..++......
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~ai~~a~~~~~~~--- 121 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRA--FYNDVFGEFAEYVTKLFGYDK-------VLPMNTGAEAVETAIKLARKWGYKV--- 121 (401)
T ss_pred CCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhcCCCE-------EEEeCccHHHHHHHHHHHHHHhhhh---
Confidence 3688888888887653221111 123344556667888887643 8999999999999999886642211
Q ss_pred cCCCCCCcEEEEcCCc-hhHHHHHHHHcCC------------eeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeec
Q 010897 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILG 211 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~-h~~~~~~~~~~g~------------~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~ 211 (498)
.|...++..|+..... |.+...+....+- ++..++ + .|+++|+++++. +..+|++...
T Consensus 122 ~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~d~~~le~~l~~~~~~~~avi~E~v 195 (401)
T TIGR01885 122 KGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-----Y-NNLEALEEALEDHGPNVCAFIVEPI 195 (401)
T ss_pred cCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-----C-CCHHHHHHHHHhcCCCEEEEEEeCc
Confidence 1222234677766655 5444444443321 122222 1 278899988863 4566777667
Q ss_pred cCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCC-CCe
Q 010897 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGV 285 (498)
Q Consensus 212 ~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~ 285 (498)
.+++|.+.| +++|.++|++| ++++++|++|.++.. ........ .++ ..|.++++ |.+.++ ..+
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~g~--~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~i 264 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCTKH------NVLLIADEIQTGLGR--TGKLLCVDHENV-KPDIVLLG--KALSGGVYPV 264 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHHhhcCC-CCCEEEee--ccccCCCCCc
Confidence 778899877 99999999999 999999999966421 11110111 111 35666654 766544 567
Q ss_pred EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010897 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (498)
Q Consensus 286 g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (498)
|+++.+. +.. +.+. ..+ ...+ ++.+.....+..++|..+..+. ..++..+++++|.+.|++++ ..
T Consensus 265 g~v~~~~-~i~-~~~~--~~~-----~~~t--~~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~ 329 (401)
T TIGR01885 265 SAVLADD-DVM-LTIK--PGE-----HGST--YGGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KP 329 (401)
T ss_pred EEEEEcH-HHH-hhcc--CCC-----CCCC--CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CC
Confidence 8877542 221 1111 001 1112 1222344555566666664433 34567778999999999885 23
Q ss_pred EeeCC-CCccEEEEEecCCC-CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 366 ILSKD-VGVPLVAFSLKDSS-AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 366 ~~~~~-~~~~~v~f~~~~~~-~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
++... ....++.+.+..+. +.+..+++++|.++|+.+.. .+...+|++....++.++++++++.|++++
T Consensus 330 ~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~-------~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 330 IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP-------THGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe-------cCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 33211 13345554453321 13567899999999987632 124579999888889999999999888775
No 277
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=1.3e-15 Score=154.03 Aligned_cols=285 Identities=18% Similarity=0.160 Sum_probs=186.7
Q ss_pred CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC----ch
Q 010897 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN----VQ 164 (498)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~----~h 164 (498)
..|...++|++ ++++.|.+. .+.+++|+.|+.+++.++.++ +++||++.. ++
T Consensus 62 ~~P~~~~lE~~----la~leg~~~-------av~~sSG~aAi~~al~all~~-------------GD~Vl~~~~~yg~t~ 117 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAEH-------ALSFSSGMGAITSAILSLIKK-------------GKRILSISDLYGQTF 117 (384)
T ss_pred CChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHH
Confidence 44666677766 888888864 788888999999888876332 478888775 34
Q ss_pred hHHHHHHHHcCCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 165 VCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 165 ~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
..+...+..+|++++.+++++ +.+.+|+ +++++|++..++|+++.+.|+++|+++|+++ + ++|
T Consensus 118 ~~~~~~~~~~Gi~v~fvd~~~~~~~~l~~--------~~tklv~~e~~snpt~~v~Di~~I~~la~~~------~--lvV 181 (384)
T PRK06434 118 YFFNKVLKTLGIHVDYIDTDRLNSLDFDP--------SNYDLIYAESITNPTLKVPDIKNVSSFCHEN------D--VIV 181 (384)
T ss_pred HHHHHHHHhcCcEEEEECCCChhheeecC--------CCeeEEEEEcCCCCCceeecHHHHHHHHHHc------C--eEE
Confidence 455577788999999999864 3233221 3689999999999999999999999999999 7 567
Q ss_pred ecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC--eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCc
Q 010897 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g--~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~ 321 (498)
|++++... ....+. .++|++..|.||++.++.+ .|++++++++.. ..+......+ |..
T Consensus 182 D~t~~s~~---~~~pl~-----~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~-~~~~~~~~~~----------G~~- 241 (384)
T PRK06434 182 DATFASPY---NQNPLD-----LGADVVIHSATKYISGHSDVVMGVAGTNNKSIF-NNLVERRKTL----------GSN- 241 (384)
T ss_pred ECCCCCcc---cCCchh-----cCCCEEEeecccccCCCCCceEEEEecCcHHHH-HHHHHHHHhc----------CCC-
Confidence 99986532 221111 2699999999999988775 566665554321 1111000001 111
Q ss_pred hHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------CCccEEEEEecCCCCCCHHHH
Q 010897 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------VGVPLVAFSLKDSSAHTVFEI 391 (498)
Q Consensus 322 ~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------~~~~~v~f~~~~~~~~~~~~l 391 (498)
...+..| +...|-+.+..++++..+++..+.+.|+++|.++ |+.|. ...++++|.+++ .....++
T Consensus 242 -~~~~~A~--l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~~~~~~f 316 (384)
T PRK06434 242 -PDPIQAY--LALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MEDVHKF 316 (384)
T ss_pred -CCHHHHH--HHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC--HHHHHHH
Confidence 1122233 3344556678999999999999999999999764 43332 135799999953 2234455
Q ss_pred HHHHHhc--CcEeee----ecCCCC--------------CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 392 SEGLRKF--GWIVPA----YTMPAN--------------AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 392 ~~~L~~~--G~~v~~----~~~~~~--------------~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.+.|.-- +..+-. .+.|.. .-..+.+|+||+- |+.+.|++||+++++
T Consensus 317 ~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 317 IRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred HHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 5555421 111000 001110 1124689999984 788888999988874
No 278
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=9.2e-17 Score=144.07 Aligned_cols=164 Identities=19% Similarity=0.078 Sum_probs=128.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH-HHHHHcCCe
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-KFARYFEVE 177 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~-~~~~~~g~~ 177 (498)
+++++++++++.+. ..+++++|+++|+.+++.++... +.+|+++++.|.+.. ..+...|++
T Consensus 4 ~~~~~l~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~g~~ 65 (170)
T cd01494 4 ELEEKLARLLQPGN-----DKAVFVPSGTGANEAALLALLGP-------------GDEVIVDANGHGSRYWVAAELAGAK 65 (170)
T ss_pred HHHHHHHHHcCCCC-----CcEEEeCCcHHHHHHHHHHhCCC-------------CCEEEEeecccceehhhHHHhcCCE
Confidence 56778999996322 23889999999999999887532 358999999998887 888999999
Q ss_pred eEEEEecCCcc-ccCHHHHHHHh-hhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 178 LKEVKLEEGYY-VMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 178 ~~~v~~~~~~~-~~d~~~L~~~i-~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
++.++.+++.. ..|.+.+++.. .+++.+++++++++++|...|+++|.++|+++ ++++|+|++|+++..+..
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~------~~~li~D~a~~~~~~~~~ 139 (170)
T cd01494 66 PVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY------GILLLVDAASAGGASPAP 139 (170)
T ss_pred EEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc------CCEEEEeccccccccccc
Confidence 99999875422 23333554433 56789999999999999999999999999999 999999999998764321
Q ss_pred CCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEe
Q 010897 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (498)
Q Consensus 256 ~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~ 291 (498)
. .+....++|+++.|+||++++ +|+|++++|
T Consensus 140 --~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 140 --G--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred --c--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 1 223334699999999999987 899999875
No 279
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.72 E-value=1.5e-15 Score=153.04 Aligned_cols=375 Identities=14% Similarity=0.152 Sum_probs=250.9
Q ss_pred CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH
Q 010897 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (498)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~ 168 (498)
..++..++-.++.++|+++.|++. ...--++|.++-+.+++++|.. ... +.+| .+...++|..+|..--
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D~------~s~QPNsGA~GEYaGL~~IRaY-~~~-kge~---hRnvClIPvSAHGTNP 644 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFDS------FSLQPNSGAQGEYAGLRVIRAY-LES-KGEG---HRNVCLIPVSAHGTNP 644 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeecccc------eeecCCCCcccchhhHHHHHHH-HHh-ccCC---cceeEEEeecccCCCh
Confidence 345777888889999999999984 2444456666666666666543 221 1122 2346699999999999
Q ss_pred HHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCccccc-CHHHHHHHHHHhhcccCCCceEEEe
Q 010897 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 169 ~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
..|.++|++++.|.++.+ +.+|..+|++...+ +-.++.++.|+|. |.++ .++++.++.+++ |--|..|
T Consensus 645 ASA~MagmkvvpV~~~~~-G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh------GGQVYlD 716 (1001)
T KOG2040|consen 645 ASAAMAGMKVVPVGCDAN-GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH------GGQVYLD 716 (1001)
T ss_pred hhHHhcCCEEEEeeccCC-CCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc------CCEEEec
Confidence 999999999999999875 78999999988765 3467888999886 9996 699999999999 9999999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC-----CCeEEEEEeCCCCCCcccccccCc-c-CCC-CCCc-c
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFHINY-L-GSD-QPTF-T 315 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p-----~g~g~~~~~~~~~l~~~~~~~~~y-l-~~~-~~~~-~ 315 (498)
||---...++-.| .|+ ++|+.-.+.||.++-| +|.|-+-++. .+...++-++-. . ... ...+ +
T Consensus 717 GANMNAqVGlc~p---Gd~---GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~--HLapfLP~HpVvs~~~~~~~~~~gs 788 (1001)
T KOG2040|consen 717 GANMNAQVGLCRP---GDI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSPGRPEDTSPVGS 788 (1001)
T ss_pred CCCccceecccCC---ccc---cccceeecccceeeecCCCCCCCCCccchhh--hccccCCCCCccCCCCCCCCCCccc
Confidence 9875433222222 232 6889999999986554 4556555543 333333322211 1 111 1111 1
Q ss_pred ccCCCchH--HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEE----EEec---CCCCC
Q 010897 316 LNFSKGSS--QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA----FSLK---DSSAH 386 (498)
Q Consensus 316 l~~sr~~~--~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~----f~~~---~~~~~ 386 (498)
......+. .+.--|+.++.+|..|++...+-.+-+++|+.++|+.. .+++.... .++|+ ..++ ...++
T Consensus 789 VsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~-~~~vaHEFIlD~r~fK~~agi 865 (1001)
T KOG2040|consen 789 VSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGE-NGLVAHEFILDLRPFKKTAGI 865 (1001)
T ss_pred eeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecC-CcceeeeeeeechhhccccCC
Confidence 11122111 12235788899999999999999999999999999986 44444332 22333 2222 22467
Q ss_pred CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCccc-------ccccccccc
Q 010897 387 TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSR-------VSTKTAHVI 459 (498)
Q Consensus 387 ~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~-------~~~~~~~~~ 459 (498)
+..+++++|.+.|...+....| -.+.+-|--++..+.+|+|||+++|-.+-++|.+.-.- ..+-.||.
T Consensus 866 eavDvAKRL~DYgFHaPTmswP----V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~- 940 (1001)
T KOG2040|consen 866 EAVDVAKRLMDYGFHAPTMSWP----VAGTLMIEPTESEDKAELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHP- 940 (1001)
T ss_pred cHHHHHHHHHhccCCCCccccc----cCCceEeccCccccHHHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCC-
Confidence 8899999999999876543322 23457776667778899999999988887777654322 11223665
Q ss_pred cccccccC--CCccccccccccc--chhhhhhhhcc-----cccccCC
Q 010897 460 PMVNETQG--DKPLKKSVRETQE--EVTRHWKRFVK-----GRRAGAC 498 (498)
Q Consensus 460 ~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~ 498 (498)
..+.+|++ ..++++.+..+.. ...+||+..-+ |++|.||
T Consensus 941 ~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~RvDd~YGD~nLvC 988 (1001)
T KOG2040|consen 941 LEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVGRVDDAYGDRNLVC 988 (1001)
T ss_pred HHHhhhhccCCccchhhhcCCchhhhhcccCCcccccccccCccceee
Confidence 44445443 3566666655442 34689988775 9999998
No 280
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=3e-15 Score=148.80 Aligned_cols=327 Identities=13% Similarity=-0.004 Sum_probs=212.5
Q ss_pred CChHHHHHHHHH-HhccCC---C---CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeec-ChhHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMA-SINKNY---V---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFK 138 (498)
Q Consensus 67 ~~~~~~~~~l~~-~~~~n~---~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~sea~~la~~a~~ 138 (498)
..++++.+.+.+ .++-+. . -...++...++-+++.+.|.++++.|.+. .+.+.. |||.+.-.+..-+.
T Consensus 14 ~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y----~Vlfl~GggT~~~ea~~~Nll 89 (364)
T PRK12462 14 ALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY----GVVFLQGGSSLQFSMIPMNFS 89 (364)
T ss_pred CCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC----eEEEEeccHHHHHHHHHHHcC
Confidence 345665555554 444322 1 11235677788889999999999998642 255555 57766655554443
Q ss_pred HHHHHHHHhcCCCCCCc-EE-EEcCCchh-HHHHHHHHcCCeeEEEEecCC---ccccCHHHHHHHhhhCCeEEEEeecc
Q 010897 139 RKWQQKRKEQGKPYDKP-NI-VTGANVQV-CWEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAILGS 212 (498)
Q Consensus 139 ~~~~~~~~~~g~~~~~~-~I-v~s~~~h~-~~~~~~~~~g~~~~~v~~~~~---~~~~d~~~L~~~i~~~t~~v~~~~~~ 212 (498)
.+ ++ .+ ++..-.+. -+.+.|+.+| ++..+...++ ....+++.+ .++++...|.+|+..
T Consensus 90 ~~-------------g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NE 153 (364)
T PRK12462 90 RP-------------GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNE 153 (364)
T ss_pred CC-------------CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCC
Confidence 21 23 23 34333333 3455566667 5555542111 124556665 334567889999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeC
Q 010897 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (498)
Q Consensus 213 t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~ 292 (498)
|.+|...| ++.+.+ +++++||+.++.+..|+ .++..|.+..+++|.++ |+|++++++++
T Consensus 154 TstGv~~~-----~~~~~~------~~llvvD~sS~~~s~pi---------d~~~~dvi~agsQKnlg-P~Gltvvivs~ 212 (364)
T PRK12462 154 TVEGLQFP-----DAAGLP------DSPLIADMSSDFMSRPF---------DVEAYGMVYAHAQKNLG-PAGVTVAIIRR 212 (364)
T ss_pred CCceEecC-----cccccC------CCeEEEEcCchhhCCCC---------ChHHccEEEeeccccCC-CCceEEEEECH
Confidence 99999986 333345 89999999998765433 22346999999999997 99999999987
Q ss_pred CCCCCcccccccCccCCC--CCCccccCCCchHHHHHHHHHHHHhcHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 293 KDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE--GYKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~--~~~~~l~~sr~~~~~~a~~~~l~~lg~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
+.. .......+.|+... ........|.+.+.+..+..+++.+..+ |+..+.++..+.++.+++.|.+.++|....
T Consensus 213 ~al-~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~ 291 (364)
T PRK12462 213 ALL-ERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCH 291 (364)
T ss_pred HHH-hhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 532 12111122333210 0111233477778888888898888777 999999999999999999999998665432
Q ss_pred C-C-C-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 369 K-D-V-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 369 ~-~-~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
. + . +...|+|++.++ .-..++.+...++|++-... + ...+.+|+|+=+..+.+.++.|++-|++.-+
T Consensus 292 ~~~~~RS~mnv~f~~~~~--~l~~~f~~~a~~~gl~~lkG----h-r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 292 AHRAARSTMNVAFRFRQP--RLDTLFKEQSTEAGFCGLSG----H-RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CChhhcCcceEEEEcCCH--HHHHHHHHHHHHCCCccccC----C-cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 2 1 1 456788998543 23568889999999764221 1 1234499999778899999888888877654
No 281
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=2.7e-15 Score=144.69 Aligned_cols=314 Identities=15% Similarity=0.130 Sum_probs=203.9
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~ 166 (498)
+..|.+...+++++.+.|.+.-|-+...+ ....++++|+|.||-..+..+.++ ++..++|.|.+..
T Consensus 117 fqdy~Gl~~frqa~A~Fm~~~r~~~v~fd-P~~~Vv~~G~T~ane~l~fcLadp-------------gdafLvPtPyY~g 182 (471)
T KOG0256|consen 117 FQDYHGLPSFRQAVAEFMERARGNRVKFD-PERVVVTNGATSANETLMFCLADP-------------GDAFLVPTPYYPG 182 (471)
T ss_pred cccccCchHHHHHHHHHHHHHhCCCCccC-ccceEEecccchhhHHHHHHhcCC-------------CceeeecCCCCCc
Confidence 34566888899999999998888776543 234899999999997666555442 4688999999999
Q ss_pred HHHHHHH-cCCeeEEEEec-CCccccCHHHHHHHhhh------CCeEEEEeeccCCcccccCHHH---HHHHHHHhhccc
Q 010897 167 WEKFARY-FEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKL---LHDLLTKKNEET 235 (498)
Q Consensus 167 ~~~~~~~-~g~~~~~v~~~-~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~l~~---I~~la~~~~~~~ 235 (498)
+..-+++ .|++++.|.+. .+++++++++||+++.. +.++|++++|+||.|...+-++ +.+++.++
T Consensus 183 fdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k---- 258 (471)
T KOG0256|consen 183 FDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK---- 258 (471)
T ss_pred ccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc----
Confidence 8876554 68999999996 56699999999988864 4689999999999999966555 55667788
Q ss_pred CCCceEEEecCcccccccccCCCCc------ccc--CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCcc
Q 010897 236 GWDTPIHVDAASGGFIAPFLYPDLE------WDF--RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL 307 (498)
Q Consensus 236 ~~~~~l~vD~A~~g~~~~~~~~~~~------~~~--~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl 307 (498)
++.+++|+.|++.+. ..++.. .+. ....+.++-.-++-+|+++.+.|.++..++......- ...
T Consensus 259 --niHvI~DEIya~sVF--~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~--kms-- 330 (471)
T KOG0256|consen 259 --NIHVISDEIYAGSVF--DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAAT--KMS-- 330 (471)
T ss_pred --ceEEEeehhhccccc--CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHH--HHh--
Confidence 999999999998763 333221 111 2223444444444478888899999977654321110 001
Q ss_pred CCCCCCccccCCCchHHHHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE-Eec
Q 010897 308 GSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF-SLK 381 (498)
Q Consensus 308 ~~~~~~~~l~~sr~~~~~~a~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~ 381 (498)
.|++ .....|+.....|. ++.+++...++...-+++.+.|++++ +..+.. .++++|| .+.
T Consensus 331 -----sf~~------vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg-I~cl~s--~AGlF~wvDlr 396 (471)
T KOG0256|consen 331 -----SFGL------VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG-IPCLKS--NAGLFCWVDLR 396 (471)
T ss_pred -----hccC------CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-Cceeec--CCeeEEEEEhH
Confidence 1111 12233443333343 34456666677777888999999987 776644 6788887 442
Q ss_pred C----CCCCCHHHHHHHHHhc-CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 382 D----SSAHTVFEISEGLRKF-GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 382 ~----~~~~~~~~l~~~L~~~-G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
. ......-+|.+++... ++.+..... ..-...+++|+|+.. ...+.++..++.|+.+++
T Consensus 397 ~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s-~~C~EpGWFRvcFAn-~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 397 KLLTSLTFEGELELWERILDNVKLNLSPGSS-CHCHEPGWFRVCFAN-MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HhcCcCChHHHHHHHHHHHHhhccccCCCCc-ceecCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 1 1111235677777777 776543221 112446789999853 333333323344444443
No 282
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.71 E-value=1.6e-14 Score=147.40 Aligned_cols=316 Identities=15% Similarity=0.075 Sum_probs=188.1
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
..+|.+.+++.+.++...... .....+++.++.+++++..+.+ ...++++|++|+..|+..++..
T Consensus 45 ~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~-------~~~~~~sG~~a~~~A~~~a~~~------ 109 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWHVS--NLFTNSLQEEVASLLAENSAGD-------LVFFCNSGAEANEAALKLARKH------ 109 (377)
T ss_pred CCCHHHHHHHHHHHHhccccc--cccCCHHHHHHHHHHHhcCCCC-------EEEEeCCcHHHHHHHHHHHHHh------
Confidence 356888888888887632211 1233567777777787766543 2899999999999999876432
Q ss_pred hcCCCCCCcEEEEc-CCchhHHHHHHHHcCCeeE---EEEecCCc-c--ccCHHHHHHHhhhCCeEEEEeeccCCccccc
Q 010897 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEVELK---EVKLEEGY-Y--VMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s-~~~h~~~~~~~~~~g~~~~---~v~~~~~~-~--~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~ 219 (498)
.| +.+|++. ...|.+........+.... ..|..++. + .-|++++++.+.+++++|++....++.|...
T Consensus 110 -~g----~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 110 -TG----KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred -cC----CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCcc
Confidence 11 3456655 4566554444444332110 11111110 0 1278999999988888888887777766653
Q ss_pred ----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 220 ----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 220 ----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
.+++|.++|++| ++++++|++|.++.. ....... .+++ ..|.+ +..|.+.++..+|+++.+. +
T Consensus 185 ~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~--~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~v~~~~-~ 252 (377)
T PRK02936 185 ADPAFLQEVQTLCKKF------GALLIIDEVQTGIGR--TGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGAMIGKK-E 252 (377)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhhCC-CCcEE--EEcccccCCCccEEEEEcH-H
Confidence 399999999999 999999999977531 1100000 1111 13544 3578777666788887543 2
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeeCC
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKD 370 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~ 370 (498)
. .+.+ .......+ ++-+.....+..++|..+.. .+.+++..++.+++.+.|++ .+.+..+..
T Consensus 253 ~-~~~~-------~~~~~~~t--~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~- 318 (377)
T PRK02936 253 L-GTAF-------GPGSHGST--FGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG- 318 (377)
T ss_pred H-Hhhc-------cCCCCCCC--CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-
Confidence 2 1211 11111111 12222344444445544422 34456666777777777765 232222222
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 371 VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
...++.+.+.+ +...+.+.|.++|+++.. .+..++|++....++.++++++++.|+++
T Consensus 319 -~g~~~~i~~~~----~~~~~~~~l~~~gv~v~~-------~g~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 319 -KGLMIGIECTE----EVAPVIEQLREEGLLVLS-------AGPNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred -cceEEEEEecc----hHHHHHHHHHHCCeEEec-------CCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 23466666643 256888999999987632 22357999987677899999888887765
No 283
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.71 E-value=3.6e-15 Score=142.91 Aligned_cols=325 Identities=15% Similarity=0.107 Sum_probs=220.2
Q ss_pred ChHHHHHHHHHHhccCCCCCc-------CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYVDMD-------EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~-------~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~ 140 (498)
-+|++.++|.+.+++...... .+.-...||.+ ||+|.+-+. ....++.--||-..+..+.+.
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~a-------ALlFsSCfVANDstLftLak~ 254 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEA-------ALLFSSCFVANDSTLFTLAKK 254 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcc-------eeeeeeeeeccchHHHHHHHH
Confidence 468899999999987433221 12233455555 888887764 222222333333223333222
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh----CCeEEEEeeccCCcc
Q 010897 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTG 216 (498)
Q Consensus 141 ~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~----~t~~v~~~~~~t~tG 216 (498)
+ .+-+|+-.+..|.|+....+-.++.=..+. ..|+++|+++++. .|++|.+-.....+|
T Consensus 255 l-----------pgcei~SD~gNHASMI~GIrns~v~K~IFr------HND~~hL~~lL~~~~~svPKivAFEtVhSM~G 317 (570)
T KOG1360|consen 255 L-----------PGCEIFSDEGNHASMIQGIRNSRVPKHIFR------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDG 317 (570)
T ss_pred C-----------CCcEEeccccchHHHHHHhhhcCCcceeec------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCC
Confidence 1 134788888899999988887776533332 3589999998875 378898999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC----ccccCCCCeeEEEEcCCccCCCCCCeEEEEEeC
Q 010897 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL----EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (498)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~----~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~ 292 (498)
.+.|+++|.+++++| |.+-.+|++++.+. +.+.. +.|--+..+|+|+...-|.++.-- |++. ..
T Consensus 318 avcpleelcDvah~y------GAiTFlDEVHAVGl---YG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG--GYIA-at 385 (570)
T KOG1360|consen 318 AVCPLEELCDVAHKY------GAITFLDEVHAVGL---YGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG--GYIA-AT 385 (570)
T ss_pred CcCCHHHHHHHHHHh------Cceeeeehhhhhcc---ccCCCCCccccCCcchhhhhcccchhhhccccc--ceeh-hh
Confidence 999999999999999 99999999987553 33321 112235678999988777543211 3332 22
Q ss_pred CCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC
Q 010897 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (498)
Q Consensus 293 ~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (498)
. .+.+ ++.+....|.+..|-+...+.....+.+.+..+.=+...+..+++.+++++.|.++| +.+++.|
T Consensus 386 ~-~LvD-------miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G-iPVi~~p-- 454 (570)
T KOG1360|consen 386 R-KLVD-------MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG-IPVIPNP-- 454 (570)
T ss_pred h-hHHH-------HHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC-CcccCCC--
Confidence 2 2212 222222333333555555666677777777544334555666778999999999997 8888664
Q ss_pred ccEEEEEecCCCCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
..+|-.++-+ ..-..++++.| .++|+++.+..+|+...+...+|++-++++|.+.++.|++++..+++++.
T Consensus 455 SHIiPv~vgd--a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 455 SHIIPVRVGD--AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred cceeeeeccC--HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 5778887733 22234666655 56799999999999999999999999999999999999999999998763
No 284
>PRK15029 arginine decarboxylase; Provisional
Probab=99.71 E-value=6.1e-15 Score=158.39 Aligned_cols=228 Identities=14% Similarity=0.060 Sum_probs=155.6
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
+..+..|++||.+. .-..++|+|.+|..++.++.++ ++.|+++..+|-|+..++.+.|+.+
T Consensus 209 eAq~~aA~~fgA~~------t~FlvNGST~gn~a~i~a~~~~-------------gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 209 ESEKYAARVFGADR------SWSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred HHHHHHHHHhCCCc------EEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCeE
Confidence 45566999999975 3778889999998777776543 5799999999999999999999999
Q ss_pred EEEEecCCcc----ccC-----HHHHHHHhhhCC--e--------EEEEeeccCCcccccCHHHHHHHHHHhhcccCCCc
Q 010897 179 KEVKLEEGYY----VMN-----PVKAVELVDENT--I--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (498)
Q Consensus 179 ~~v~~~~~~~----~~d-----~~~L~~~i~~~t--~--------~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~ 239 (498)
++++..-+.+ .++ ++.++++|..++ + ++++++||+ .|.+.|+++|+++|+++ ++
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~------~~ 342 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKT------SD 342 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhc------CC
Confidence 9997542111 344 899999997543 3 788888855 59999999999999999 99
Q ss_pred eEEEecCcccccccccCCCCcc--cc-----CCCCee-EEEEcCCccCCCCCCeEEEEEeCCC-CCC-cccccccCccCC
Q 010897 240 PIHVDAASGGFIAPFLYPDLEW--DF-----RLPLVK-SINVSGHKYGLVYAGVGWVVWRTKD-DLP-DELVFHINYLGS 309 (498)
Q Consensus 240 ~l~vD~A~~g~~~~~~~~~~~~--~~-----~~~~~d-si~~s~hK~l~~p~g~g~~~~~~~~-~l~-~~~~~~~~yl~~ 309 (498)
+|+||+|||.... +.+.++. -+ ...++| .++-|.||.+.+-...+++.+++.. .+. +.+......+.+
T Consensus 343 ~llvDEAhGah~~--F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qS 420 (755)
T PRK15029 343 RLHFDEAWYGYAR--FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT 420 (755)
T ss_pred eEEEECccccccc--cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcC
Confidence 9999999987642 2333331 11 114688 8888999999988888888886542 111 111000111111
Q ss_pred CCCCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010897 310 DQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGR 363 (498)
Q Consensus 310 ~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (498)
.|.+..-+.++=.+.+.+.. .| ++.+++..+.+..+++.|.++++
T Consensus 421 --------TSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 421 --------TSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred --------CCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 12221222223333333332 33 45677788888888888877654
No 285
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.71 E-value=6.3e-15 Score=140.88 Aligned_cols=305 Identities=20% Similarity=0.205 Sum_probs=198.3
Q ss_pred CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh---
Q 010897 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--- 165 (498)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~--- 165 (498)
.-|-+..+|++ ++.|-|-- ..+.+.+|..|+.+|+..+... +++||.++.-|.
T Consensus 60 ~NPT~~vlE~R----iAaLEGG~-------aa~a~aSG~AA~~~ai~~la~a-------------GD~iVss~~LYGGT~ 115 (426)
T COG2873 60 MNPTTDVLEER----IAALEGGV-------AALAVASGQAAITYAILNLAGA-------------GDNIVSSSKLYGGTY 115 (426)
T ss_pred cCchHHHHHHH----HHHhhcch-------hhhhhccchHHHHHHHHHhccC-------------CCeeEeeccccCchH
Confidence 34677778877 77776553 3677778999999998877553 578988876443
Q ss_pred -HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 166 -CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 166 -~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
-+....+.+|+++++|.. .|++.++++|++||++|++-.-.||-+.+.|++.|+++|+++ +++++||
T Consensus 116 ~lf~~tl~~~Gi~v~fvd~------~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~------gvpliVD 183 (426)
T COG2873 116 NLFSHTLKRLGIEVRFVDP------DDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRH------GVPLIVD 183 (426)
T ss_pred HHHHHHHHhcCcEEEEeCC------CCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHc------CCcEEEe
Confidence 444556889999999973 469999999999999999999999999999999999999999 9999999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCC--CCC-----CcccccccCccCCCCCC-cc
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTK--DDL-----PDELVFHINYLGSDQPT-FT 315 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~--~~l-----~~~~~~~~~yl~~~~~~-~~ 315 (498)
...+..+ ++...+ -++|++.-|..||+++. ..+|.+++-.. ++. +.....++.|.+-.... |+
T Consensus 184 NT~atpy---l~rP~~-----hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g 255 (426)
T COG2873 184 NTFATPY---LCRPIE-----HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFG 255 (426)
T ss_pred cCCCcce---ecchhh-----cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcc
Confidence 9988743 332221 26999999999998653 33455554321 111 11111122333321100 10
Q ss_pred -----c----cCCCc-hHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC---------------
Q 010897 316 -----L----NFSKG-SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD--------------- 370 (498)
Q Consensus 316 -----l----~~sr~-~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--------------- 370 (498)
+ .+.|. +..+..+.+-+...|.|.+.-++++..+++..+.+.|++.|.+.-++-+
T Consensus 256 ~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl 335 (426)
T COG2873 256 NAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYL 335 (426)
T ss_pred cHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhc
Confidence 0 00000 0011222333445688999999999999999999999999876543311
Q ss_pred --CCccEEEEEecCCCCCCHHHHHHHH------HhcC----cEe-eeecCCCC---------CCCeeEEEEeecCCCCHH
Q 010897 371 --VGVPLVAFSLKDSSAHTVFEISEGL------RKFG----WIV-PAYTMPAN---------AENVAVLRVVVREDFSRS 428 (498)
Q Consensus 371 --~~~~~v~f~~~~~~~~~~~~l~~~L------~~~G----~~v-~~~~~~~~---------~~~~~~lRv~v~~~~t~~ 428 (498)
....+++|.+++.. ....++.+.| ..-| .+| ++.+.... .-....+|+||+- |
T Consensus 336 ~~g~g~vltF~~kgg~-ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----E 410 (426)
T COG2873 336 PKGAGAVLTFGVKGGY-EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----E 410 (426)
T ss_pred cCCCceEEEEEecChH-HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----C
Confidence 02348899987531 1123444433 2223 222 22211100 1234679999973 7
Q ss_pred HHHHHHHHHHHHHH
Q 010897 429 LVERLISHIEEVLK 442 (498)
Q Consensus 429 ~~~~l~~~l~~~l~ 442 (498)
+++.++.||+++++
T Consensus 411 d~~DiiaDl~qAl~ 424 (426)
T COG2873 411 DIDDIIADLEQALE 424 (426)
T ss_pred CHHHHHHHHHHHHh
Confidence 78888899988775
No 286
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.70 E-value=1.9e-14 Score=147.66 Aligned_cols=324 Identities=15% Similarity=0.060 Sum_probs=196.3
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++.......+ ......++.+.|+++++.+ ...++++|++|+..|++.++.-... +
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~L~~~~~~~-------~~~f~~SGseA~e~Alk~ar~~~~~-~-- 119 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIGNGY--TNEPVLRLAKKLVDATFAD-------KVFFCNSGAEANEAALKLARRYALD-K-- 119 (397)
T ss_pred CCHHHHHHHHHHHHhcccccCcc--CCHHHHHHHHHHHhhCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHh-c--
Confidence 47888888888887632111111 1233446666788877653 2899999999999999988653221 1
Q ss_pred cCCCCCCcEEE-EcCCchhHHHHHHHHcCCe------------eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 148 ~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~------------~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
.| .++..|+ .....|.+..-+....+.. +..+| + .|++++++++.+++.+|++...++.
T Consensus 120 ~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~d~~~l~~~l~~~~aavi~Epi~~~ 191 (397)
T TIGR03246 120 HG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-----Y-NDLAAAKALISDKTCAVIVEPIQGE 191 (397)
T ss_pred CC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-----C-CCHHHHHHHhccCeEEEEEecccCC
Confidence 11 1234555 4556777665554544421 11121 1 3789999999888888877755555
Q ss_pred cccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEE
Q 010897 215 TGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (498)
Q Consensus 215 tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~ 289 (498)
.|.+ +.+++|.++|++| |+++++|+++.|+.- ...-... .+++ ..|++++ -|.+.++..+|+++
T Consensus 192 ~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~Gr--~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~ 260 (397)
T TIGR03246 192 GGVVPADPAFLKGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDILTS--AKALGGGFPIGAML 260 (397)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--cccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEE
Confidence 5643 4599999999999 999999999976521 1110000 1222 2566643 56665667789888
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEee
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-FEILS 368 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~ 368 (498)
.++. +.+.+. ......+. +-+.....+..++|..+.. .+..++..++.++|.+.|+++.. +.++.
T Consensus 261 ~~~~--i~~~~~-------~~~~~~t~--~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~ 326 (397)
T TIGR03246 261 TTTE--IAAHLK-------VGTHGTTY--GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFS 326 (397)
T ss_pred EcHH--HHHhcc-------CCCcCCCC--CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 7542 212211 11111122 2222344445556655433 35677888888999888887641 22222
Q ss_pred CCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 369 KDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 369 ~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
... ...++.+.+.+........+++.|.++|+++.. .+..++|++....+|.++++++++.|++++..
T Consensus 327 ~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 327 EIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI-------AGPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred eeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee-------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 211 233445555321112356899999999988643 12357999888888999999999999888764
No 287
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=1.4e-14 Score=144.43 Aligned_cols=290 Identities=19% Similarity=0.138 Sum_probs=196.7
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHH-
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE- 168 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~- 168 (498)
.|....+|+. ++.|-|.+. +..+++|..|+..+++++.+. ++.|++++..|....
T Consensus 62 nPT~~~lE~~----~a~LEg~~~-------~~afsSGmaAI~~~~l~ll~~-------------GD~vl~~~~~YG~t~~ 117 (396)
T COG0626 62 NPTRDALEEA----LAELEGGED-------AFAFSSGMAAISTALLALLKA-------------GDHVLLPDDLYGGTYR 117 (396)
T ss_pred CccHHHHHHH----HHHhhCCCc-------EEEecCcHHHHHHHHHHhcCC-------------CCEEEecCCccchHHH
Confidence 4566666665 888887764 888889999998888887653 578998887666443
Q ss_pred ---HHHHHcCCeeEEEEecCCccccCHHHHHHHhh-hCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 169 ---KFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 169 ---~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
+..+.+|+++.+++. .|.+++++++. ++|++|++-.|+||+..+.|+.+|+++|+++ ++.++||
T Consensus 118 ~~~~~l~~~gi~~~~~d~------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~------g~~vvVD 185 (396)
T COG0626 118 LFEKILQKFGVEVTFVDP------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAY------GALVVVD 185 (396)
T ss_pred HHHHHHHhcCeEEEEECC------CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhc------CCEEEEE
Confidence 444557888877763 34556666666 5999999999999999999999999999999 9999999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe--EEEEEeCCCCCCccccccc-CccCCCCCCccccCCCc
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKG 321 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~--g~~~~~~~~~l~~~~~~~~-~yl~~~~~~~~l~~sr~ 321 (498)
..++..+. ..| +. .++|++.-|..||+.+...+ |+++.+++ .+...+.... .++|..
T Consensus 186 NTfatP~~--q~P---L~---~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-~~~~~~~~~~~~~~G~~----------- 245 (396)
T COG0626 186 NTFATPVL--QRP---LE---LGADIVVHSATKYLGGHSDVLGGVVLTPNE-ELYELLFFAQRANTGAV----------- 245 (396)
T ss_pred CCcccccc--cCh---hh---cCCCEEEEeccccccCCcceeeeEEecChH-HHHHHHHHHHHhhcCCC-----------
Confidence 99988652 221 12 25999999999999988875 54443433 3222211111 123221
Q ss_pred hHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCC
Q 010897 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSA 385 (498)
Q Consensus 322 ~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~ 385 (498)
....-.|..+ .|-+.+..++++..+++..+.+.|++.|.++ |+.+. ...++++|.+++.
T Consensus 246 -l~p~dA~l~l--RGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-- 320 (396)
T COG0626 246 -LSPFDAWLLL--RGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-- 320 (396)
T ss_pred -CCHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--
Confidence 1222234444 4556778899999999999999999998876 44332 1457999999652
Q ss_pred CCHHHHHHHHHhcCcEee------eecCC---------CC-----CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLRKFGWIVP------AYTMP---------AN-----AENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v~------~~~~~---------~~-----~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.+..++.+.|.--....+ -.+.| .. .-..+.+|++|+- |+++.|++||+++++.+
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 321 EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 234455555543221110 00011 10 1225789999984 78888999999988754
No 288
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.68 E-value=5.4e-14 Score=137.10 Aligned_cols=357 Identities=15% Similarity=0.138 Sum_probs=219.6
Q ss_pred CCCCCHHHHHHHHHHhhhccC-CCCCcccccccCCChHHHHHHHHH---Hhcc-CCCCCcCCcchHHHHHHHHHHHHHHc
Q 010897 34 DNSMPKEAAYQVINDELMLDG-NPRLNLASFVTTWMEPECDKLVMA---SINK-NYVDMDEYPVTTELQNRCVNMIAHLF 108 (498)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~l~~---~~~~-n~~~~~~~~~~~~le~~~~~~la~l~ 108 (498)
..+.+..++++.++.+.+.+. .+.|--.++..+..|+.+..-+.+ ++.. .++.++-+++..+.--+...++++|+
T Consensus 54 ~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT 133 (450)
T COG0403 54 PKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT 133 (450)
T ss_pred CCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh
Confidence 345589999999998876543 122323334444555555422221 1222 23344455566666667889999999
Q ss_pred CCCCCCCCCcceeeecCh---hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHH----HcCCeeEEE
Q 010897 109 NTPVADDKTAVGVGTVGS---SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR----YFEVELKEV 181 (498)
Q Consensus 109 g~~~~~~~~~~~~~t~g~---sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~----~~g~~~~~v 181 (498)
|++.-+ .-.--++ .||++++.+..+.+ +.+++++...|+......+ -+|++++.+
T Consensus 134 Gm~VAN-----ASm~DeaTAaAEAm~ma~r~~k~k-------------~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~ 195 (450)
T COG0403 134 GLDVAN-----ASMLDEATAAAEAMLMAKRVTKKK-------------RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV 195 (450)
T ss_pred CCCccc-----chhhhhHHHHHHHHHHHHHhhcCc-------------CceEEecCCCCHHHHHHHHhhcccCceEEEEe
Confidence 999633 2222233 34444443333221 3589999999996665543 356666666
Q ss_pred EecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc-cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc
Q 010897 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG-EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (498)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG-~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~ 260 (498)
+.+ |.++|++..+.++.+|++-.|++. | ...|+.+|.+.+|++ +.+++|=.=--.. .++.|..
T Consensus 196 ~~~------d~~~l~~~~~~~~~gv~vQyP~~~-G~~~~d~~~l~~~~h~~------~al~~v~aDplaL--~LL~pPG- 259 (450)
T COG0403 196 DAD------DLDDLESADDGDVFGVLVQYPNTF-GIVEEDLRALIEAAHSA------GALVIVAADPLAL--GLLKPPG- 259 (450)
T ss_pred ccc------hhhhhhhccccCeEEEEEecCCCC-CccchhHHHHHHHHhhc------CCEEEEEechhHh--hccCCcc-
Confidence 653 678888883347899999999865 7 777899999999999 8777654321111 1132221
Q ss_pred cccCCCCeeEEEEcCCccC----CCCCCeEEEEEeCCCC--CCccc-ccccCccC----------------CCCCCcccc
Q 010897 261 WDFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDD--LPDEL-VFHINYLG----------------SDQPTFTLN 317 (498)
Q Consensus 261 ~~~~~~~~dsi~~s~hK~l----~~p~g~g~~~~~~~~~--l~~~~-~~~~~yl~----------------~~~~~~~l~ 317 (498)
. -++|++..+++.+| ++++.+|++.++++-. .|..+ ....+-.| .+..+-++
T Consensus 260 -e---~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI- 334 (450)
T COG0403 260 -E---FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI- 334 (450)
T ss_pred -c---cCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh-
Confidence 1 26899999998876 4456689998876421 11110 00011011 11111111
Q ss_pred CCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 318 FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 318 ~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
||.-+..+++....+..+|.+|++++.++.++++.+|.++|++.+ +++++.+. .+..+.++++. .....+.++..
T Consensus 335 CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~-fFdt~~v~~~~---~~~~~l~~~~~ 410 (450)
T COG0403 335 CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH-FFDTFTVRVPE---EVAEALLAAAI 410 (450)
T ss_pred hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccc-ceeeEEEecch---hHHHHHHHHHH
Confidence 333233334444445779999999999999999999999999654 58887663 67777887742 12446667777
Q ss_pred hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 397 KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 397 ~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
..|+-++... ...+=+++.+..|+++++.|++.+...
T Consensus 411 ~~G~~L~~~~-------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 411 AGGINLRRVD-------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hcCCceeeec-------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 7777654321 124678888888899998887776644
No 289
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.68 E-value=3.9e-14 Score=143.19 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=197.9
Q ss_pred CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhH
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~ 166 (498)
|..+|...++|++ +++++|.+. .+.|++|+.|+.++...... .+++| +..+|++
T Consensus 74 Yagd~s~~~LE~~----vAe~lG~e~-------aV~v~sGTaAl~ll~~l~v~-------------pGd~V--p~n~~f~ 127 (460)
T PRK13237 74 YAGSRNFYHLEET----VQEYYGFKH-------VVPTHQGRGAENLLSRIAIK-------------PGQYV--PGNMYFT 127 (460)
T ss_pred hcCCCcHHHHHHH----HHHHHCCCe-------EEEeCCHHHHHHHHHHhCCC-------------CcCEE--CCccchH
Confidence 5667777788877 788899975 89999999998874322111 12333 7777777
Q ss_pred HHHH-HHHcCCeeEEEEec---------CCccccCHHHHHHHhhhC----CeEEEEeeccCCcc-cc---cCHHHHHHHH
Q 010897 167 WEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAILGSTLTG-EF---EDVKLLHDLL 228 (498)
Q Consensus 167 ~~~~-~~~~g~~~~~v~~~---------~~~~~~d~~~L~~~i~~~----t~~v~~~~~~t~tG-~~---~~l~~I~~la 228 (498)
-..+ ....|+.+.-+.++ +.++.+|+++|+++|+++ +.+|.++.++|..| .. +++++|.++|
T Consensus 128 Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA 207 (460)
T PRK13237 128 TTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELC 207 (460)
T ss_pred hhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHH
Confidence 6666 67777754444311 345889999999999864 34677788888874 44 5789999999
Q ss_pred HHhhcccCCCceEEEecCcccccccccCC---CCc-ccc------CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 229 TKKNEETGWDTPIHVDAASGGFIAPFLYP---DLE-WDF------RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 229 ~~~~~~~~~~~~l~vD~A~~g~~~~~~~~---~~~-~~~------~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
+++ |++||.|+|+....+-|+.. ... ... -....|.+++|+||-+.++.| |++++++++...+
T Consensus 208 ~~~------Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~ 280 (460)
T PRK13237 208 DKH------GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDE 280 (460)
T ss_pred HHc------CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHH
Confidence 999 99999999996442212211 010 000 024689999999999988774 7777787654433
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEE
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (498)
.....+.|-+-. ++ |...+-.+.++..+|...-++ ..+++..+..++|.+.|.+.| +.++.+. +..-|.+
T Consensus 281 ~r~~~~~~eG~~--ty---gg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~G-vpv~~p~-ggH~v~v 350 (460)
T PRK13237 281 AKELVVVYEGMP--SY---GGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAG-VPIVEPV-GGHAVFL 350 (460)
T ss_pred HHHhccccCCCc--CC---CChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCC-CceecCC-CceEEEE
Confidence 222222222211 11 111112344444455433332 566777788999999999986 8888654 3343433
Q ss_pred Eec------CCCCCCHHHHHHHHHhc-CcEee---ee---cCCCCC----CCeeEEEEeec-CCCCHHHHHHHHHHHHHH
Q 010897 379 SLK------DSSAHTVFEISEGLRKF-GWIVP---AY---TMPANA----ENVAVLRVVVR-EDFSRSLVERLISHIEEV 440 (498)
Q Consensus 379 ~~~------~~~~~~~~~l~~~L~~~-G~~v~---~~---~~~~~~----~~~~~lRv~v~-~~~t~~~~~~l~~~l~~~ 440 (498)
... +...+....|+..|... |+--. .. .-|... .....+|+++- .-.|.+.+|...+.|..+
T Consensus 351 da~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 351 DARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred EhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence 321 22345677888877654 33211 11 111111 11367899983 456888898888888887
Q ss_pred HHHHHcC
Q 010897 441 LKEIESL 447 (498)
Q Consensus 441 l~~l~~~ 447 (498)
.+.-+..
T Consensus 431 ~~~~~~~ 437 (460)
T PRK13237 431 YKHREDI 437 (460)
T ss_pred HHhHhhc
Confidence 7665444
No 290
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.67 E-value=1.2e-13 Score=142.07 Aligned_cols=325 Identities=13% Similarity=0.055 Sum_probs=191.2
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++.......+ ......++.+.|+++.+.+. ..++++|++|+..|+..++.... .+
T Consensus 56 h~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~-------~~~~~sGseA~e~a~klar~~~~-~~- 124 (403)
T PRK05093 56 HCHPALVKALKEQGEKLWHISNVF--TNEPALRLAKKLIDATFAER-------VFFANSGAEANEAAFKLARRYAC-DR- 124 (403)
T ss_pred CCCHHHHHHHHHHHHhcCcccCcc--CCHHHHHHHHHHHhhCCCCE-------EEEeCchHHHHHHHHHHHHHHHh-hc-
Confidence 357888888888886532211111 12223366667888775532 89999999999999997754321 11
Q ss_pred hcCCCCCCc-EEEEcCCchhHHHHHHHHcCC------------eeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 147 EQGKPYDKP-NIVTGANVQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 147 ~~g~~~~~~-~Iv~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
.+ .++. .|.+....|.+...+....|- ++..++ .-|++.+++.+.+++++|++. |.+
T Consensus 125 -~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~aaiiie-p~~ 194 (403)
T PRK05093 125 -HG--PEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDDHTCAVVVE-PIQ 194 (403)
T ss_pred -CC--CCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcCCeEEEEEe-ccc
Confidence 01 1133 444566677765544333221 112221 127899999998888877777 677
Q ss_pred Ccccc-cC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 214 LTGEF-ED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 214 ~tG~~-~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
++|.+ .+ +++|.++|++| |+++++|++|+++.. ....... .+++ ..|.. +..|.+.++..+|+
T Consensus 195 ~~gg~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pdi~--s~sK~l~~G~rig~ 263 (403)
T PRK05093 195 GEGGVIPATPEFLQGLRELCDQH------NALLIFDEVQTGMGR--TGDLFAYMHYGV-TPDIL--TSAKALGGGFPIGA 263 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchhhhhcCC-CCCEE--EecccccCCcceEE
Confidence 77654 23 89999999999 999999999987531 1110000 1111 13443 34577777778999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEI 366 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~ 366 (498)
++.++. . .+.+. ......+ ++.+.....+..++|+.+.. .+..++..++.++|.+.|++++ .+.+
T Consensus 264 vv~~~~-i-~~~l~-------~~~~~~t--~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~ 329 (403)
T PRK05093 264 MLTTAE-I-ASHFK-------VGTHGST--YGGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGV 329 (403)
T ss_pred EEEcHH-H-HhhcC-------CCCCCCC--CCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 987542 1 11111 0001111 11112233333444444422 2445677788888888888763 1112
Q ss_pred eeCCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 367 LSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 367 ~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.... ...++.+.+++....+..+++++|.++|+.+.. .+..++|+++...++.++++++++.|+++++.+
T Consensus 330 ~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~-------~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 330 FSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLV-------AGPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred eEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEec-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 22211 233445555321111456899999999987642 123579999887789999999999999888653
No 291
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.67 E-value=1.2e-13 Score=140.74 Aligned_cols=315 Identities=15% Similarity=0.075 Sum_probs=187.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+......+. .....++.+ +++.+..+.+ ....++++|++|+..|+..++..
T Consensus 44 G~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~----la~~l~~~~~----~~~~~~~SGseA~~~Al~~ar~~------ 107 (375)
T PRK04260 44 GFHPQVQQALQKQAGLIWHSPN--LYLNSLQEE----VAQKLIGDKD----YLAFFCNSGAEANEAAIKIARKA------ 107 (375)
T ss_pred CCCHHHHHHHHHHHHhcCcccC--ccCCHHHHH----HHHHHhcCcC----CEEEEcCccHHHHHHHHHHHHHh------
Confidence 4478899999888876433222 222334444 4443322221 24689999999999999887542
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHcCCee---------EEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVEL---------KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~~---------~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
.| ++.|++ ....|.+...++...|.+. ..++... ..|++.+++.+++++.+|++..+++++|
T Consensus 108 -~~----~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dl~~l~~~l~~~~a~vi~e~v~~~~G 179 (375)
T PRK04260 108 -TG----KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI---FNDLNSVKALVNKNTAAVMLELVQGESG 179 (375)
T ss_pred -cC----CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC---CCCHHHHHHhcCCCeEEEEECCeECCCC
Confidence 11 345655 4567776655555444321 1111111 2489999999987888898988999999
Q ss_pred cccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEe
Q 010897 217 EFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (498)
Q Consensus 217 ~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~ 291 (498)
.+.+ +++|.++|+++ |+++++|++|.++.. ....... ..++ ..|.+ +..|.+.++..+|+++.+
T Consensus 180 ~~~~~~~~l~~~~~l~~~~------~~~~i~De~~~g~g~--~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~ 248 (375)
T PRK04260 180 VLPADKDFVKALADYCQET------GILLIVDEVQTGMGR--TGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAK 248 (375)
T ss_pred CcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEc
Confidence 8855 89999999999 999999999976531 1111111 1121 13443 467877666778999876
Q ss_pred CCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHH-HHHHHHHHHHHHHHHHHhcCCCeEEeeCC
Q 010897 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYK-NIMENCMGNARALREGLEKTGRFEILSKD 370 (498)
Q Consensus 292 ~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~-~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (498)
+. . ...+. .. ....+ ++.+.....+..+.+..+..+++. +..+....+++.+.+.+.+.+.+..+..
T Consensus 249 ~~-~-~~~~~------~~-~~~~t--~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 316 (375)
T PRK04260 249 SS-L-GGAFG------YG-SHGST--FGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG- 316 (375)
T ss_pred HH-H-HhhcC------CC-CCCCC--CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-
Confidence 42 1 11111 00 01111 222223444445555554444332 2333333344445555555442222222
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 371 VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
...++.+.+. .+..++.++|.++|+.+.. .+...+|++.+...+.++++++++.|+++
T Consensus 317 -~g~~~~~~~~----~~~~~~~~~l~~~Gi~v~~-------~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 317 -LGYMIGIETT----ADLSQLVEAARDKGLIVLT-------AGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred -cceEEEEEec----CcHHHHHHHHHhCCCEEec-------CCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 3455555652 2467899999999998632 12366999998888999999888888765
No 292
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.67 E-value=4.9e-14 Score=144.98 Aligned_cols=332 Identities=14% Similarity=0.014 Sum_probs=196.9
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++-......+ ......++.+.|+++++.+ ...++++|+||+..|++.++.... .+
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~e~Alk~ar~~~~-~~-- 123 (406)
T PRK12381 56 AHPALREALNEQASKFWHTGNGY--TNEPVLRLAKKLIDATFAD-------RVFFCNSGAEANEAALKLARKYAH-DR-- 123 (406)
T ss_pred CCHHHHHHHHHHHhhcccccCcc--CCHHHHHHHHHHHhhCCCC-------eEEEcCCcHHHHHHHHHHHHHHHh-hc--
Confidence 36888888888887532211111 1223345666788877543 399999999999999998865422 11
Q ss_pred cCCCCCCcEEEE-cCCchhHHHHHHHHcCCeeE---EEEecCC---ccccCHHHHHHHhhhCCeEEEEeeccCCccc---
Q 010897 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGE--- 217 (498)
Q Consensus 148 ~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~~~---~v~~~~~---~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~--- 217 (498)
+. .++..|+. ....|....-+....+.... ..++.++ -...|+++|++.+.+++.+|++ .|.+++|.
T Consensus 124 -~~-~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii-EPv~~~gg~~~ 200 (406)
T PRK12381 124 -YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV-EPIQGEGGVIP 200 (406)
T ss_pred -CC-CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-eCCcCCCCCcC
Confidence 11 12345654 45566665544444442210 0011000 0124789999999877776666 57888875
Q ss_pred --ccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 218 --FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 218 --~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
.+.+++|.++|++| |+++++|++|.|+.. ...-... .+++ ..|.+ +.-|.+.++..+|+++.+++
T Consensus 201 ~~~~~l~~l~~l~~~~------~~llI~DEv~tG~gr--~G~~~~~~~~~v-~pDi~--t~sK~l~gG~~ig~~~~~~~- 268 (406)
T PRK12381 201 ADKAFLQGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDVL--TTAKALGGGFPIGAMLTTEK- 268 (406)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEcchhhCCCC--CcchhhhHhhCC-CCCEE--EehhhhhCCCceEEEEEcHH-
Confidence 36789999999999 999999999976521 1110000 1122 24554 44587777778899886542
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCC-
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVG- 372 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~- 372 (498)
.. +.+ .......+ ++-+.....+..++|+.+..+ +..++..++.++|.+.|+++. .+.++.....
T Consensus 269 ~~-~~~-------~~~~~~~t--~~~~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~ 335 (406)
T PRK12381 269 CA-SVM-------TVGTHGTT--YGGNPLASAVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFSEIRGL 335 (406)
T ss_pred HH-hhc-------CCCCCCCC--CCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecC
Confidence 11 111 11111111 222223444455555555332 466777888888888888763 1222222212
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 373 VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
..++.+.+.++.......+.+.|.++|+.+... +..++|++....+|.++++++++.|+++++.+..
T Consensus 336 Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 336 GLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------GPNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred eEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 234455553311113468889999999887421 2347999987778999999999999999877643
No 293
>PLN02624 ornithine-delta-aminotransferase
Probab=99.67 E-value=1.8e-13 Score=142.95 Aligned_cols=325 Identities=13% Similarity=0.068 Sum_probs=190.4
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++.......+ ......++.+.|+++++.+. ..++++|+||+..|+..++..+...
T Consensus 91 h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~AlklAr~~~~~~-- 159 (474)
T PLN02624 91 HCHPKIIKALTEQAEKLTLSSRAF--YNDKFPEFAEYLTSMFGYDM-------VLPMNTGAEGVETAIKLARKWGYEK-- 159 (474)
T ss_pred CCCHHHHHHHHHHHHhcCCccccc--CCHHHHHHHHHHHhhcCCCe-------EEEeCChHHHHHHHHHHHHHHHHhh--
Confidence 347889999998888743322111 12333456666888887643 8999999999999999776532211
Q ss_pred hcCCCCCCcEEEEcC-CchhHHHHHHHHcCC------------eeEEEEecCCccccCHHHHHHHhh---hCCeEEEEee
Q 010897 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVD---ENTICVAAIL 210 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~d~~~L~~~i~---~~t~~v~~~~ 210 (498)
.|.+.++..|+... ..|....-+....+- ++..+| + -|++.|++.++ +++.+|++..
T Consensus 160 -~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~-~d~~~l~~~l~~~~~~iaaiiiEp 232 (474)
T PLN02624 160 -KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVD-----F-GDLDALEKIFEEDGDRIAAFLFEP 232 (474)
T ss_pred -cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeC-----C-CCHHHHHHHHHhCCCCEEEEEECC
Confidence 12111233455433 344432222222211 112222 1 27889999886 3467788888
Q ss_pred ccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCC-CC
Q 010897 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY-AG 284 (498)
Q Consensus 211 ~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g 284 (498)
+.+++|.+.| +++|.++|++| |+++++|++|.|+.. .......+ .++ ..|.++++ |.++++ ..
T Consensus 233 v~~~~G~v~p~~~~L~~l~~lc~~~------gillI~DEv~tG~Gr--tG~~~a~~~~~i-~pDiv~ls--K~lggG~~p 301 (474)
T PLN02624 233 IQGEAGVVIPPDGYLKAVRELCSKH------NVLMIADEIQTGLAR--TGKMLACDWEEV-RPDVVILG--KALGGGVIP 301 (474)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--CcchhhHHhcCC-CCCEEEec--ccccCCCCc
Confidence 9999999877 99999999999 999999999987521 11111111 122 35777764 655444 67
Q ss_pred eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---
Q 010897 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT--- 361 (498)
Q Consensus 285 ~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~--- 361 (498)
+|+++.+. +.. ..+ ... ....+ ++-+.....+..++|..+..++ ..++..++.++|.+.|+++
T Consensus 302 igav~~~~-~i~-~~~--~~~-----~~~~T--~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~ 367 (474)
T PLN02624 302 VSAVLADK-DVM-LCI--KPG-----EHGST--FGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQ 367 (474)
T ss_pred ceeeeecH-HHH-hHh--ccC-----CcCCC--CCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHh
Confidence 88887653 221 111 000 01111 1222244455555665554433 3445556666666666553
Q ss_pred -CC-eEEeeCCCCccEEEEEecCCC--CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 362 -GR-FEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 362 -~~-~~~~~~~~~~~~v~f~~~~~~--~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+. +.-+.. ...++.+.+..+. .....++++.|.++|+.+.. .+..++|++....+|.++++++++.|
T Consensus 368 ~~~~i~~vrg--~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p-------~~~~~lR~~p~l~~t~e~id~~l~~L 438 (474)
T PLN02624 368 FPKLIKEVRG--RGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKP-------THDTIIRLAPPLSISEDELQECSKAL 438 (474)
T ss_pred CCCceEEEEe--eEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEec-------CCCCEEEEECCccCCHHHHHHHHHHH
Confidence 31 221211 2334555553221 12346889999999987632 13467999987788999999999999
Q ss_pred HHHHHH
Q 010897 438 EEVLKE 443 (498)
Q Consensus 438 ~~~l~~ 443 (498)
+++++.
T Consensus 439 ~~~l~~ 444 (474)
T PLN02624 439 SDVLEH 444 (474)
T ss_pred HHHHHH
Confidence 988855
No 294
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=1.7e-13 Score=139.96 Aligned_cols=323 Identities=13% Similarity=0.012 Sum_probs=197.2
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|++.+++.+.+........ ....+.+.++.+++++..+.+ ...++++|+||+..|+..++.... +
T Consensus 53 ~~p~v~~a~~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~-------~v~f~~SGseA~e~Aik~ar~~~~--~-- 119 (395)
T PRK03715 53 CNPGMVEALAAQAEKLINPSP--AFYNEPMAKLAGLLTQHSCFD-------KVFFANSGAEANEGAIKLARKWGR--K-- 119 (395)
T ss_pred CCHHHHHHHHHHHHhcccccc--cccCHHHHHHHHHHhhccCCC-------EEEEeCCcHHHHHHHHHHHHHHhh--c--
Confidence 368888888888765332211 223456667777777654432 389999999999999998865311 0
Q ss_pred cCCCCCCcEEE-EcCCchhHHHHHHHHcCCeeE---EEEecCCcc----ccCHHHHHHHhhhCCeEEEEeeccCCccccc
Q 010897 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEVELK---EVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 148 ~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~~~---~v~~~~~~~----~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~ 219 (498)
+. .++.+|+ .....|.+...++...|.... ..|...+ + ..|++.+++.+.+++.+|++.......|.+.
T Consensus 120 -~~-~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~ 196 (395)
T PRK03715 120 -HK-NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPG-FPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIP 196 (395)
T ss_pred -cC-CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCC-ceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCcc
Confidence 00 1123454 555677777666666553311 1111111 1 1478999999987788887776666667776
Q ss_pred C----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 220 ~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
| +++|.++|+++ |+++++|+++.|+.- ...-.... +++ ..|.++++ |.+.++..+|.++.+++
T Consensus 197 ~~~~~l~~l~~l~~~~------~~llI~DEv~tG~GR--tG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~- 264 (395)
T PRK03715 197 ATREFMQQLRALTKQH------GLLLIVDEVQTGCGR--TGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAE- 264 (395)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccc-
Confidence 6 99999999999 999999999987521 11100001 222 25766663 66655566788876653
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCC
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDV 371 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~ 371 (498)
.. . +...+. ..|+ +-++....+..++|..+..+ +..++..++.++|.+.|+++. ++.-+..
T Consensus 265 i~--~--~~~~~~-----~~T~--~g~pl~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG-- 328 (395)
T PRK03715 265 VA--V--FEAGDQ-----GGTY--NGNPLMTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGERG-- 328 (395)
T ss_pred cc--c--ccCCCc-----CCCC--CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc--
Confidence 21 1 111111 1121 22234556666777666543 456777778888888877541 1322211
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhc---CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 372 GVPLVAFSLKDSSAHTVFEISEGLRKF---GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~---G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...++.+.+.++ ....+.+.+.+. |+++... ....+|++....+|+++++++++.|+++++.+
T Consensus 329 ~Glm~~i~l~~~---~~~~~~~~~~~~~~~Gi~~~~~-------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 329 EGLLRALLLGKD---IGPQIVEKARDMQPDGLLLNAP-------RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred ceeEEEEEecCc---hHHHHHHHHHhccCCCEEEeec-------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 345666766431 123455555555 9876421 12469999998999999999999999998754
No 295
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.64 E-value=5.8e-14 Score=149.45 Aligned_cols=305 Identities=12% Similarity=0.045 Sum_probs=189.9
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH-HHHcCCe
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEVE 177 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~-~~~~g~~ 177 (498)
+..+..|++||.+. .-.+++|+|.+|..++.++..+ ++.|+++...|-|+..+ +.+.|+.
T Consensus 178 eAq~~AA~~fgAd~------tyFlvNGTS~gn~a~i~a~~~~-------------Gd~VLvdRN~HKSv~hgaLiLsGa~ 238 (720)
T PRK13578 178 DAQKHAAKVFNADK------TYFVLNGTSASNKVVTNALLTP-------------GDLVLFDRNNHKSNHHGALIQAGAT 238 (720)
T ss_pred HHHHHHHHHhCCCc------eEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHHcCCe
Confidence 45566999999975 3778889999998888877553 57999999999999985 8899999
Q ss_pred eEEEEecCCcc----ccCH-----HHHHHHhhhC----------CeEEEEeeccCCcccccCHHHHHHH-HHHhhcccCC
Q 010897 178 LKEVKLEEGYY----VMNP-----VKAVELVDEN----------TICVAAILGSTLTGEFEDVKLLHDL-LTKKNEETGW 237 (498)
Q Consensus 178 ~~~v~~~~~~~----~~d~-----~~L~~~i~~~----------t~~v~~~~~~t~tG~~~~l~~I~~l-a~~~~~~~~~ 237 (498)
+++++..-+.+ .+++ +.++++|.++ .+++++++|| +.|.+-++++|.++ ++.+
T Consensus 239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~------ 311 (720)
T PRK13578 239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLC------ 311 (720)
T ss_pred EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccC------
Confidence 99988653222 3454 5588888765 3678888885 45999999999998 6777
Q ss_pred CceEEEecCcccccccccCCCC---ccccCCCCee----EEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCC
Q 010897 238 DTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (498)
Q Consensus 238 ~~~l~vD~A~~g~~~~~~~~~~---~~~~~~~~~d----si~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~ 310 (498)
+ +||||+|||+.. .| .|.. ...-.-.++| .++-|.||.+.+-...+++.+++.. +.. ...|+...
T Consensus 312 ~-~llvDEAhgah~-~F-~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~-i~g----~~~~v~~~ 383 (720)
T PRK13578 312 D-YILFDSAWVGYE-QF-IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH-IKG----QARYCPHK 383 (720)
T ss_pred C-cEEEeCcchhhh-cc-CcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc-ccc----ccccCCHH
Confidence 7 999999998764 23 2321 1010113567 9999999999888888888776532 110 00111110
Q ss_pred --CCCcccc-CCCchHHHHH-HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEeeCCC--------------
Q 010897 311 --QPTFTLN-FSKGSSQIIA-QYYQFIRLGFEGYKNIMENCMGNARALREGL-EKTGRFEILSKDV-------------- 371 (498)
Q Consensus 311 --~~~~~l~-~sr~~~~~~a-~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~~~~-------------- 371 (498)
...+.+- .|-+...+++ +=.+-+.+..+.-++.++++.+++..+++.| +.+++|.++.++.
T Consensus 384 r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~ 463 (720)
T PRK13578 384 RLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQI 463 (720)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhh
Confidence 0011111 1222222222 2122222222122567778888888888888 7777787763210
Q ss_pred -------------C---------------ccEEEEEecCCC---------CCCHHHHHHHHHhcCcEeeeecCCCCCCCe
Q 010897 372 -------------G---------------VPLVAFSLKDSS---------AHTVFEISEGLRKFGWIVPAYTMPANAENV 414 (498)
Q Consensus 372 -------------~---------------~~~v~f~~~~~~---------~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~ 414 (498)
. ..=+.+..++-+ ++....+.+.|+++||++-- + +.
T Consensus 464 ~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~-~------d~ 536 (720)
T PRK13578 464 ASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEK-C------DL 536 (720)
T ss_pred cccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEe-c------CC
Confidence 0 000111111110 22268999999888876521 1 11
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 415 AVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 415 ~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
..+=+-++...|.++.++|+++|.++-+..
T Consensus 537 ~~vL~l~s~g~t~~~~~~Lv~aL~~f~~~~ 566 (720)
T PRK13578 537 NSILFLLTPAEDMAKLQQLVAMLARFEKHI 566 (720)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 223333344568899999999988775443
No 296
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.64 E-value=6.7e-14 Score=148.85 Aligned_cols=297 Identities=15% Similarity=0.151 Sum_probs=193.0
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
+..+..|++||.+. .-.+++|+|.+|..++.++..+ ++.|+++...|-|+..++.+.|+.+
T Consensus 199 eAe~~AA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~haLilsga~P 259 (714)
T PRK15400 199 EAEEYIARVFNADR------SYMVTNGTSTANKIVGMYSAPA-------------GSTVLIDRNCHKSLTHLMMMSDVTP 259 (714)
T ss_pred HHHHHHHHHhCCCc------EEEEeCchHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCeE
Confidence 45566999999985 3677889999998887776543 5799999999999999999999999
Q ss_pred EEEEecCCcc----ccC-----HHHHHHHhhhCC-----eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 179 KEVKLEEGYY----VMN-----PVKAVELVDENT-----ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 179 ~~v~~~~~~~----~~d-----~~~L~~~i~~~t-----~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
++++...+.+ .++ ++.++++|.+++ +.+++++| |+.|.+-++++|.++|+.+ + +|||
T Consensus 260 VYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~------~--ilvD 330 (714)
T PRK15400 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK------S--IHFD 330 (714)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCC------C--EEEE
Confidence 9997653222 234 899999997643 36888888 6679999999999999877 6 7999
Q ss_pred cCcccccccccCCCCccccCC-CCe---e--EEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccC
Q 010897 245 AASGGFIAPFLYPDLEWDFRL-PLV---K--SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~-~~~---d--si~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~ 318 (498)
+|||+... | .|.++....+ .++ | .++-|.||.+.+-...+++.++.. +. .-.++..|... ..
T Consensus 331 EAwgah~~-F-~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~--vd-~~~~n~a~~m~-------~S 398 (714)
T PRK15400 331 SAWVPYTN-F-SPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD--VN-EETFNEAYMMH-------TT 398 (714)
T ss_pred ccchhhhc-c-CcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC--CC-HHHHHHHHHHH-------cC
Confidence 99987642 2 3322211111 223 4 888999999987766676655432 11 10111111111 11
Q ss_pred CCchHHH-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEeeCCC----------------Cc--
Q 010897 319 SKGSSQI-IAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR------FEILSKDV----------------GV-- 373 (498)
Q Consensus 319 sr~~~~~-~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~----------------~~-- 373 (498)
|-+...+ .++=.+.+.+..+.-++.+++..+.+..+++.|.++++ |.++.++. ++
T Consensus 399 TSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~ 478 (714)
T PRK15400 399 TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKN 478 (714)
T ss_pred CCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccc
Confidence 2222232 22223333333222356788888899999999988877 77764220 00
Q ss_pred ----------cEEEEEecC--------CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHH
Q 010897 374 ----------PLVAFSLKD--------SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLIS 435 (498)
Q Consensus 374 ----------~~v~f~~~~--------~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~ 435 (498)
.=+.+..++ ..+++...+.+.|.++||++-- .+...+=+.++...|.++.++|++
T Consensus 479 ~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~-------~d~~~iLfl~s~g~t~~~~~~L~~ 551 (714)
T PRK15400 479 IDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEK-------TGPYNLLFLFSIGIDKTKALSLLR 551 (714)
T ss_pred ccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHHHHHHH
Confidence 001122221 0256678899999999987522 112224444555678899999999
Q ss_pred HHHHHHH
Q 010897 436 HIEEVLK 442 (498)
Q Consensus 436 ~l~~~l~ 442 (498)
+|.++-+
T Consensus 552 aL~~f~~ 558 (714)
T PRK15400 552 ALTDFKR 558 (714)
T ss_pred HHHHHHH
Confidence 8887744
No 297
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=7.1e-13 Score=123.08 Aligned_cols=366 Identities=16% Similarity=0.141 Sum_probs=205.6
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccccCCChHHHHHHH----HHHhc-----cCCCCCcCCcchHHHHHHHHHHHHHHcC
Q 010897 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLV----MASIN-----KNYVDMDEYPVTTELQNRCVNMIAHLFN 109 (498)
Q Consensus 39 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l----~~~~~-----~n~~~~~~~~~~~~le~~~~~~la~l~g 109 (498)
..++++++.|-++-.| ..+|+++.|.. .|++.+.. .+.+. ++...|+..++-+.+-..+.+++.+-+|
T Consensus 16 i~~lMdDl~d~Lrt~g--~imLggGNPa~-iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPG--AIMLGGGNPAR-IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCC--ceeeCCCCccc-ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 4556666665554332 23344444432 34444333 23222 2344567777888899999999999999
Q ss_pred CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-CCchhHHHHHHHHcCC------eeEEEE
Q 010897 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARYFEV------ELKEVK 182 (498)
Q Consensus 110 ~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s-~~~h~~~~~~~~~~g~------~~~~v~ 182 (498)
+.-.+ -.+..|+|+..+.++....+..+. ..| ..-.|+.| ++.|..|..++---.+ ++..++
T Consensus 93 wnit~---~NIalTnGSQs~fFYlfNlF~G~~-----sdG---~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~ 161 (417)
T COG3977 93 WNITA---QNIALTNGSQSAFFYLFNLFAGRR-----SDG---TEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLP 161 (417)
T ss_pred CCCcc---ceeeecCCccchHHHHHHHhcCcc-----CCC---cceeEeeccChhhccccccccCccceeeccCCccccc
Confidence 98643 349999999999988887764331 111 11256554 3344443332111000 011111
Q ss_pred ecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC
Q 010897 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (498)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~ 259 (498)
-..=.|+.|.++|.- .+.+-+|+++-|+||||.+ +.+..|.++|++| |+++++|.|||--.......+.
T Consensus 162 ~g~FKY~vDF~~l~i--~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~------giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 162 AGQFKYHVDFEHLHI--GESTGAICVSRPTNPTGNVLTDEELAKLDALARQH------GIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred ccceeeccCHHHccc--ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc------CCcEEEecccCCCCCceecccc
Confidence 111126788887753 4678899999999999998 5688889999999 9999999999964221111111
Q ss_pred ccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHH---HHHHHhc
Q 010897 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY---YQFIRLG 336 (498)
Q Consensus 260 ~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~---~~l~~lg 336 (498)
...+ -+ =...++|..|.++.+.+||+++...+ .. .. +.+.+...++..+|.+..+.+-. -.|.++.
T Consensus 234 ~~~w-~~-NiilC~SLSK~GLPG~R~GIiIane~-vi-qa-------itnmn~iisLap~~~G~Aia~~mie~gdl~rls 302 (417)
T COG3977 234 TPLW-NE-NIILCMSLSKLGLPGSRCGIIIANEK-VI-QA-------ITNMNGIISLAPGRMGPAIAAEMIESGDLLRLS 302 (417)
T ss_pred cccC-CC-CEEEEeehhhcCCCCcceeEEEccHH-HH-HH-------HHhccceeeecCCCccHHHHHHHhhcchHHHHH
Confidence 1111 12 24578899999999999999885432 21 11 22222233343444433332211 1223333
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEeeCCCCccEEEE-EecCCCCCCHHHHHHHHHhcCcEee-eec-CCC---
Q 010897 337 FEGYKNIMENCMG-NARALREGLEKTGRFEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKFGWIVP-AYT-MPA--- 409 (498)
Q Consensus 337 ~~g~~~~~~~~~~-~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~G~~v~-~~~-~~~--- 409 (498)
++-++-..++..+ .-..|+..|-+.+ +.+- ++ ...++.| .+++ -.++..++.++|.++|+++. +.. +|.
T Consensus 303 eqVIrPFY~~~~q~~~~~l~~~lp~~~-~~iH-kp-EGAIFlWLWf~d-LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ 378 (417)
T COG3977 303 EQVIRPFYRNRVQTTIAILRRYLPEYR-CLIH-KP-EGAIFLWLWFKD-LPITTEELYQRLKARGVLMVPGHYFFPGLDK 378 (417)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhcCccc-eeee-cC-Ccceeehhhhcc-CCCCHHHHHHHHHhCeEEEecccccCCCCCC
Confidence 3333322222222 2223344444444 4443 33 3344443 4432 24678899999999998763 322 222
Q ss_pred CC-CCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 410 NA-ENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 410 ~~-~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.+ ....|+|++... ..++++.-+..|.+.+++
T Consensus 379 ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 379 EWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVER 411 (417)
T ss_pred CCCCccceEEEecCC--CHHHHHHHHHHHHHHHHH
Confidence 12 235789999754 566777666666655544
No 298
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=5.8e-16 Score=150.41 Aligned_cols=256 Identities=19% Similarity=0.210 Sum_probs=163.5
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
++|++.++|.++..... .|...+.+.++++. +++++|.+. .+++.+||.||.+++.+..++
T Consensus 7 ~~~~m~~a~~~a~~gd~-~Yg~D~~~~~l~~~----i~~l~g~e~-------a~f~~sGT~An~~al~~~~~~------- 67 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD-AYGEDPTTARLEER----IAELFGKEA-------ALFVPSGTMANQLALRAHLRP------- 67 (290)
T ss_dssp S-HHEEHHHHHTTSB-C-CTTSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHHHHT-------
T ss_pred CCHHHHHHHHccccCCc-ccCCChhHHHHHHH----HHHHcCCCE-------EEEeCCCChHHHHHHHHHHhc-------
Confidence 66777777744333222 46777777777665 888999985 679999999999999998754
Q ss_pred cCCCCCCcEEEEcCCchhHHHHH---HHHcCCeeEEEEecCCccccCHHHHHHHhhh------CCeEEEEeeccCCc-cc
Q 010897 148 QGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT-GE 217 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~~h~~~~~~---~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~------~t~~v~~~~~~t~t-G~ 217 (498)
...|++...+|...... ....|++++.++..++ +.+|+++|++.+.+ ++.+|+++++++.. |.
T Consensus 68 ------~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 68 ------GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp ------TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred ------CCceeccccceeeeeccchhhHhcCcEEEECCCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 35899999999966542 3557888888887663 68999999999976 46788888888765 55
Q ss_pred c---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCC
Q 010897 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (498)
Q Consensus 218 ~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~ 294 (498)
+ +.+++|.++|+++ |+++|+|||--.-.+......+. ++ ...+|+++++++|.++.|.| ++++ -+++
T Consensus 141 ~~s~~el~ai~~~a~~~------gl~lhmDGARl~~a~~~~~~~~~-e~-~~~~D~v~~~~tK~~g~~~G-avl~-~~~~ 210 (290)
T PF01212_consen 141 VYSLEELRAISELAREH------GLPLHMDGARLANAAAALGVSLA-EI-AAGADSVSFGGTKNGGAPGG-AVLA-GNKE 210 (290)
T ss_dssp ---HHHHHHHHHHHHHH------T-EEEEEETTHHHHHCHHHHHHH-HH-HTTSSEEEEETTSTT-SSSE-EEEE-ESHH
T ss_pred eCCHHHHHHHHHHHHhC------ceEEEEehhhHHHhhhcccccHH-HH-hhhCCEEEEEEEcccccccc-eEEE-echH
Confidence 5 5677888999999 99999999853221100100000 11 14699999999999887765 3343 3333
Q ss_pred CCCcccccccCccCCCCCCccccCCCchHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY--YQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 295 ~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~--~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
.+.+...+ ..++++.... .+...+..++ .++..+ +.......+..+++++|.+.|+.++ +.+..+
T Consensus 211 ~i~~~~~~-~k~~gg~~~~------~G~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~-~~~~~~ 277 (290)
T PF01212_consen 211 FIAKARRQ-RKRLGGGMRQ------AGVLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALG-GVLPRP 277 (290)
T ss_dssp HHHHHHHH-HHHHTHHHHH------TTHHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEEC-EEEETT
T ss_pred HHHHHHHH-HHHhccCeee------cceeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCC-CcccCC
Confidence 22222111 1222221100 0001111112 222222 3336777888899999999999998 555544
No 299
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=7.1e-13 Score=141.07 Aligned_cols=296 Identities=15% Similarity=0.129 Sum_probs=191.6
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
+..+..|+.||.+. .-.+++|+|.+|..++.++..+ ++.|+++...|-|+..++.+.|+.+
T Consensus 199 eAe~~aA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~~aLilsga~P 259 (713)
T PRK15399 199 EAEEYIARTFGAEQ------SYIVTNGTSTSNKIVGMYAAPA-------------GSTLLIDRNCHKSLAHLLMMSDVVP 259 (713)
T ss_pred HHHHHHHHHhCCCc------EEEEeCChHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCee
Confidence 44556899999985 3777889999998888887553 5799999999999999999999999
Q ss_pred EEEEecCCcc----ccCH-----HHHHHHhhhC-----CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCc-eEEE
Q 010897 179 KEVKLEEGYY----VMNP-----VKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT-PIHV 243 (498)
Q Consensus 179 ~~v~~~~~~~----~~d~-----~~L~~~i~~~-----t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~-~l~v 243 (498)
++++...+.+ .+++ +.++++|.++ |+.+++++| |+.|.+-++++|.+++ ++ .+||
T Consensus 260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---------g~~~ilv 329 (713)
T PRK15399 260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---------DVPSIHF 329 (713)
T ss_pred EEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---------CCCEEEE
Confidence 9997652222 3455 8999999754 357888888 6669999999999988 34 4589
Q ss_pred ecCcccccccccCCCCc--ccc-CCCCeeEE---EEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCcccc
Q 010897 244 DAASGGFIAPFLYPDLE--WDF-RLPLVKSI---NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLN 317 (498)
Q Consensus 244 D~A~~g~~~~~~~~~~~--~~~-~~~~~dsi---~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~ 317 (498)
|+|||+.. .| .|..+ .-+ ...+.|.+ +-|.||.+.+-...+++.++.. +. .-.++..|....
T Consensus 330 DEAhgah~-~F-~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~--vd-~~~~n~a~~m~~------- 397 (713)
T PRK15399 330 DSAWVPYT-HF-HPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE--YD-EETFNEAFMMHT------- 397 (713)
T ss_pred eccchhhh-hc-CcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC--CC-HHHHHHHHHHHc-------
Confidence 99998764 22 23222 111 11134555 8999999988888888887652 21 111111111111
Q ss_pred CCCchHHH-HHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEeeCCC------------------
Q 010897 318 FSKGSSQI-IAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGR------FEILSKDV------------------ 371 (498)
Q Consensus 318 ~sr~~~~~-~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~------------------ 371 (498)
.|-+...+ .++=.+.+.+. ..| ++.+++..+.+..+++.|.++++ |+++.++.
T Consensus 398 STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf 476 (713)
T PRK15399 398 STSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGF 476 (713)
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccc
Confidence 12222222 22223333333 234 56788888889999999988776 66654210
Q ss_pred ----------CccEEEEEecC--------CCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHH
Q 010897 372 ----------GVPLVAFSLKD--------SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 372 ----------~~~~v~f~~~~--------~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
...=+.+..++ ..+++...+.+.|.++||++--. +...+=+-++...|.++.++|
T Consensus 477 ~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~-------d~~~vL~l~s~g~t~~~~~~L 549 (713)
T PRK15399 477 KDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKT-------GPYNLLFLFSIGIDKTKAMGL 549 (713)
T ss_pred cccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEec-------CCCeEEEEeCCCCCHHHHHHH
Confidence 00001122221 12567889999999999875321 122233444455688999999
Q ss_pred HHHHHHHHHH
Q 010897 434 ISHIEEVLKE 443 (498)
Q Consensus 434 ~~~l~~~l~~ 443 (498)
+++|.++-+.
T Consensus 550 ~~aL~~f~~~ 559 (713)
T PRK15399 550 LRGLTEFKRA 559 (713)
T ss_pred HHHHHHHHHh
Confidence 9988877443
No 300
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.58 E-value=4.8e-12 Score=129.78 Aligned_cols=346 Identities=14% Similarity=0.070 Sum_probs=200.3
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.++.-...... ...+...++.+.|.++.... ....++++|||
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~L~~~~~~~------~~v~f~~sGse 109 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNV--FYSAPPLKLAEELVTASRFA------EKVFLCNSGTE 109 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhCCCC------CEEEEcCchHH
Confidence 566654444332 2245788888888887753222111 12233346666677765321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCCeeEE---EEecCC----ccccCHHHHHHHhh
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEVELKE---VKLEEG----YYVMNPVKAVELVD 200 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~~~~---v~~~~~----~~~~d~~~L~~~i~ 200 (498)
|+..|++.++..+.. .|.+.++.+|+. ....|....-+....|-.... -|..++ .+ -|++.+++++.
T Consensus 110 A~e~AlklAr~~~~~----~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~ 184 (408)
T PRK04612 110 ANEAAIKLVRKWASS----QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMA 184 (408)
T ss_pred HHHHHHHHHHHHHHh----hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhC
Confidence 999999998764321 132122345654 445566544444333321100 011110 02 27889999887
Q ss_pred hCCeEEEEeeccCCcccccC-----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCC--CeeEEEE
Q 010897 201 ENTICVAAILGSTLTGEFED-----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP--LVKSINV 273 (498)
Q Consensus 201 ~~t~~v~~~~~~t~tG~~~~-----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~--~~dsi~~ 273 (498)
.++++.+++.|...+|.+.+ +++|.++|+++ |+++++|++|.|+.. . ... +..... ..|.+++
T Consensus 185 ~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr--~-G~~-~a~~~~~~~pdi~t~ 254 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH------DALLVLDEIQCGMGR--T-GTL-FAHWQEQVTPDIVTL 254 (408)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--C-Cch-hhhhhcCCCCCEEEE
Confidence 66677777778887776533 88999999999 999999999987531 1 111 111111 2344433
Q ss_pred cCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010897 274 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARA 353 (498)
Q Consensus 274 s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~ 353 (498)
-|.+.++..+|+++.++. . .+.+. ......++ +-+.....+..++|..+..+ +..++..++.++
T Consensus 255 --~K~l~~G~piga~~~~~~-~-~~~~~-------~~~~~~t~--~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~ 318 (408)
T PRK04612 255 --AKALGGGFPIGAMLAGPK-V-AETMQ-------FGAHGTTF--GGNPLAAAVARVALRKLASP---QIAANVARQSAA 318 (408)
T ss_pred --cchhcCCCceEEEEECHH-H-Hhhhc-------CCCcCCCC--CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHH
Confidence 566666677898886542 1 11111 11111222 22234455555566555443 456777778888
Q ss_pred HHHHHhcCCC-eEEeeCCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHH
Q 010897 354 LREGLEKTGR-FEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 354 l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~ 431 (498)
|.+.|+++.. +.++.... ...++.+.+.+...-....+.+.|.++|+.+.. .+...+|++....+|.++++
T Consensus 319 l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~-------~g~~~lRl~Ppl~it~eeid 391 (408)
T PRK04612 319 LRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ-------AGPDVLRFVPALNLTDAELA 391 (408)
T ss_pred HHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEee-------CCCCEEEEcCCccCCHHHHH
Confidence 8877776421 22222111 233445555321111246788999999988632 13367999988888999999
Q ss_pred HHHHHHHHHHHHH
Q 010897 432 RLISHIEEVLKEI 444 (498)
Q Consensus 432 ~l~~~l~~~l~~l 444 (498)
++++.+++++..+
T Consensus 392 ~~l~~l~~~l~~~ 404 (408)
T PRK04612 392 DGLARLRLALADY 404 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 301
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=2.5e-12 Score=132.96 Aligned_cols=353 Identities=11% Similarity=0.023 Sum_probs=197.8
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCC-CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+||..+.+.++. -.+.+|.+.+++.+.+++-... ...++ .+.+.++.+.|++++.-.. ....++++|+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~-----~~v~f~~sGs 112 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFT--HEPAERLAQRLVALTPGGL-----DHVFFSDSGS 112 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccC--CHHHHHHHHHHHHhCCCCC-----CEEEEeCCcH
Confidence 566654433321 2234688889898888763321 11112 2344466777888763111 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCc-cccCHH
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGY-YVMNPV 193 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~-~~~d~~ 193 (498)
||+..|++.++..+.. + |. .++.+|+. ....|....-+....+- .+..++...++ ...+++
T Consensus 113 eA~e~A~klar~~~~~-~---~~-~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 187 (423)
T PRK05964 113 VAVEVALKMALQYWRN-R---GE-PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLD 187 (423)
T ss_pred HHHHHHHHHHHHHHHh-c---CC-CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHH
Confidence 9999999998764221 1 11 12345654 44455543333222221 12334332211 112377
Q ss_pred HHHHHhhh---CCeEEEEee-ccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cC
Q 010897 194 KAVELVDE---NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR 264 (498)
Q Consensus 194 ~L~~~i~~---~t~~v~~~~-~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~ 264 (498)
.+++.+.+ +..+|++.- .....|... .+++|.++|++| |+++++|+++.|+.. ...-.... ++
T Consensus 188 ~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~ 259 (423)
T PRK05964 188 ALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH------GVLLIFDEIATGFGR--TGTLFACEQAG 259 (423)
T ss_pred HHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhHHHhcC
Confidence 88888853 334444432 234446553 489999999999 999999999977521 11000001 12
Q ss_pred CCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHH
Q 010897 265 LPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~ 343 (498)
+ ..|.++++ |++.++ ..+|+++.+. +.. +.+.... ......++-.++-+.....+..++++.+..+ ..
T Consensus 260 v-~pDi~~~~--K~l~gG~~p~~av~~~~-~i~-~~~~~~~---~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~ 328 (423)
T PRK05964 260 V-SPDIMCLS--KGLTGGYLPLAATLCTA-EIF-EAFYSDD---RAKAFMHSPSYTANPLACAAANASLDLFEDE---PV 328 (423)
T ss_pred C-CCCeeeee--hhhhcCcccceEEEEcH-HHH-HhhhcCC---cccccccCCCCCcCHHHHHHHHHHHHHHHhc---CH
Confidence 2 25666554 887665 5788877543 221 2111000 0000001101222334555566666665443 35
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeeC-CCCccEEEEEecCCCC-CCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEee
Q 010897 344 MENCMGNARALREGLEKTGRFEILSK-DVGVPLVAFSLKDSSA-HTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVV 421 (498)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~-~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v 421 (498)
.++..++.++|.+.|+++..+..+.+ .....++.+.+.+... .....+.+.|.++|+++... ...+|++.
T Consensus 329 ~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~--------~~~lR~~p 400 (423)
T PRK05964 329 LERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL--------GNTIYLMP 400 (423)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec--------CCEEEEeC
Confidence 57777788888888876633332221 1124556777743211 12467889999999886431 13699998
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 010897 422 REDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 422 ~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...+|++++|++++.++++++++
T Consensus 401 ~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 401 PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CcccCHHHHHHHHHHHHHHHhhC
Confidence 88899999999999999998753
No 302
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.56 E-value=1.7e-12 Score=134.55 Aligned_cols=338 Identities=15% Similarity=0.047 Sum_probs=185.6
Q ss_pred cCCCCCcccccccC----CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~~----~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+++.. +.+|.+.+++.+.+++........+.. .++.+.|++++... ....+++||+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~----~~lae~l~~~~~~~------~~v~~~~sGse 115 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAE----ILLAKEIISRVPSV------EMVRFVNSGTE 115 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHH----HHHHHHHHHhCCcc------cEEEEeCCHHH
Confidence 56665555544322 457889999988887643322222233 34555577766432 13899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHH-HHHHHHcC--CeeEEEEec--------CCccc---cCHHH
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW-EKFARYFE--VELKEVKLE--------EGYYV---MNPVK 194 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~-~~~~~~~g--~~~~~v~~~--------~~~~~---~d~~~ 194 (498)
|+..|++.++.. .| +++|+...++|..+ ..+....+ ......+.. .+.+. .|+++
T Consensus 116 A~e~Alk~ar~~-------~g----r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 184 (423)
T TIGR00713 116 ATMSAVRLARGY-------TG----RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEA 184 (423)
T ss_pred HHHHHHHHHHHh-------hC----CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHH
Confidence 999999988653 11 35677666544433 22221111 110000000 00011 27999
Q ss_pred HHHHhh---hCCeEEEEe-eccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCC
Q 010897 195 AVELVD---ENTICVAAI-LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL 265 (498)
Q Consensus 195 L~~~i~---~~t~~v~~~-~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~ 265 (498)
|++++. +++.+|++. .+++ +|.+.| +++|.++|++| |+++++|++|.++..+ ..... .+++
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~r~g---~~~~~~~~~~ 254 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY------GSLLIFDEVMTGFRVA---LGGAQEYFGV 254 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh------CCEEEEEccccccccC---cchhHHHhCC
Confidence 999987 456777775 4444 788866 78999999999 9999999999876321 11000 1122
Q ss_pred CCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHH-HHHH
Q 010897 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY-KNIM 344 (498)
Q Consensus 266 ~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~-~~~~ 344 (498)
..|.+ +..|.+.++..+|+++.+.. .. +.+... .......+ ++-+.....+..++|..+..+++ ....
T Consensus 255 -~pDi~--t~sK~l~~G~pig~v~~~~~-i~-~~~~~~----~~~~~~~T--~~~~~~~~aaa~a~l~~~~~~~~~~~~~ 323 (423)
T TIGR00713 255 -EPDLT--TLGKIIGGGLPVGAFGGRRE-IM-ERLAPE----GPVYQAGT--LSGNPLAMAAGLATLKLLDEEGVYTELD 323 (423)
T ss_pred -Ccchh--hhhhhhcCCCceeeeeEHHH-HH-HhhCcC----CCeeeccC--CCCCHHHHHHHHHHHHHHhcccHHHHHH
Confidence 13433 45777766677899886542 21 111100 00000011 12223444555566665544433 3333
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCC--------CC---HHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA--------HT---VFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 345 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~--------~~---~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
+....+++.|.+.+++.+ +...... ...++.+.+..+.. .+ ...+.+.|.++|+.+....
T Consensus 324 ~~~~~~~~~l~~~~~~~~-~~~~v~~-~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------- 394 (423)
T TIGR00713 324 ELAKRLAEGLSEVLEDTG-IPHTVNR-VGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ------- 394 (423)
T ss_pred HHHHHHHHHHHHHHHhcC-CCeEEEe-eccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC-------
Confidence 333345555565566665 4321111 23444443421110 12 2368889999998764321
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
...+|++. ..|.++++++++.|+++++.
T Consensus 395 ~~~~~l~~--~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 395 FEACFLSA--AHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ccceeeEC--CCCHHHHHHHHHHHHHHHhh
Confidence 12367764 46999999999999888764
No 303
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.56 E-value=3e-12 Score=138.93 Aligned_cols=349 Identities=15% Similarity=0.072 Sum_probs=211.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhhccCC-CCCcccccccCCChHHHHHHHHH---Hhcc-CCCCCcCCcchHHHHHHHHHHHH
Q 010897 31 KMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVMA---SINK-NYVDMDEYPVTTELQNRCVNMIA 105 (498)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~l~~---~~~~-n~~~~~~~~~~~~le~~~~~~la 105 (498)
.+|+ +.+..++++.++++...+.. ..|--.++..+..|+.+.+-+.+ ++.. .++.++-+++..+..-+.+.|++
T Consensus 56 ~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~ 134 (954)
T PRK12566 56 DLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTI 134 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHH
Confidence 3443 67899999999887654422 22323334444555555343332 1222 24455566787777788999999
Q ss_pred HHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH----HHHcCCeeEEE
Q 010897 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYFEVELKEV 181 (498)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~----~~~~g~~~~~v 181 (498)
+|+|++..+.+ .---.+...||++++.+..+. ++.++++++..|+.+... ++.+|++++.
T Consensus 135 ~LtGm~vaNAS--l~D~atA~aEA~~ma~~~~~~-------------k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~- 198 (954)
T PRK12566 135 DLTGLDLANAS--LLDEATAAAEAMALAKRVAKS-------------KSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV- 198 (954)
T ss_pred HHhCchhhhhh--hccchhHHHHHHHHHHHHhhc-------------CCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-
Confidence 99999963210 000111223555554432211 135799999999976653 3445666553
Q ss_pred EecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc
Q 010897 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (498)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~ 261 (498)
+++++.+++++.+|++..||+ .|.++|+++|.+++|++ |.+++ +++---. +..+.+. .
T Consensus 199 -----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~------gal~~-~~~d~la-L~ll~~P--g 256 (954)
T PRK12566 199 -----------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQ------QALAC-VAADLLS-LLVLTPP--G 256 (954)
T ss_pred -----------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHHHHHc------CCEEE-EEeCHHH-HhCCCCh--h
Confidence 234445666788898888876 59999999999999999 87754 4433111 0112221 1
Q ss_pred ccCCCCeeEEEEcCCccC----CCCCCeEEEEEeCCCCCCcccccc-----cC------c----------cCCCCCCccc
Q 010897 262 DFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDDLPDELVFH-----IN------Y----------LGSDQPTFTL 316 (498)
Q Consensus 262 ~~~~~~~dsi~~s~hK~l----~~p~g~g~~~~~~~~~l~~~~~~~-----~~------y----------l~~~~~~~~l 316 (498)
+ -++|++..+++.++ ++++..|++.++++ +.+.++-+ .+ | +..+..+-.+
T Consensus 257 e---~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~--~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNI 331 (954)
T PRK12566 257 E---LGADVVLGSTQRFGVPMGYGGPHAAYFACRDD--YKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNI 331 (954)
T ss_pred h---cCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH--HHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchh
Confidence 2 26888866666543 44556788887753 21221111 01 1 0111111111
Q ss_pred cCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHH
Q 010897 317 NFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLR 396 (498)
Q Consensus 317 ~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (498)
||..+..++.....+..+|.+|++++.++++.++.+|.+.|++. |+++..++ .+..+.+++ + .+..++.++..
T Consensus 332 -CT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~~-fF~~~~v~~-~---~~~~~~~~~a~ 404 (954)
T PRK12566 332 -CTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRLNRH-FFDTLTLEV-G---GAQAAIIESAE 404 (954)
T ss_pred -hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC-ccceEEEEc-c---CCHHHHHHHHH
Confidence 33322223333333466899999999999999999999999995 48887663 566666666 2 14567888888
Q ss_pred hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 397 KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 397 ~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+.|+-++.. +...+.|++.+.+|.++++.++..+
T Consensus 405 ~~~~n~r~~-------~~~~~~~s~de~~~~~~~~~~~~~f 438 (954)
T PRK12566 405 AARINLRIL-------GRGRLGVSLDETCDEATVARLFDIF 438 (954)
T ss_pred HCCCeeEEe-------CCCeEEEEeCCCCCHHHHHHHHHHh
Confidence 899887653 1234889998888988888777766
No 304
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=4.9e-12 Score=132.59 Aligned_cols=362 Identities=16% Similarity=0.051 Sum_probs=200.3
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++..+....+....+...++.+.|.+++.-.. .....++++|+|
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK----MGKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC----CCEEEEeCChHH
Confidence 566655544422 224578899999988877433211112234445566666777653211 124888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEE-EEcCCchhHHHHHHHHcCCe------------eEEEEecCCccc------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNI-VTGANVQVCWEKFARYFEVE------------LKEVKLEEGYYV------ 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~I-v~s~~~h~~~~~~~~~~g~~------------~~~v~~~~~~~~------ 189 (498)
|+..|++.++..+. . .|.+ ++.+| ......|.+..-+....|.. +..++... .++
T Consensus 163 A~e~AlKlAr~~~~-~---~g~~-~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 236 (504)
T PLN02760 163 ANDTQVKLVWYYNN-A---LGRP-NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH-YWRFHLPGE 236 (504)
T ss_pred HHHHHHHHHHHHHH-h---cCCC-CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc-ccccCCCCC
Confidence 99999999865321 1 1221 13344 45557777665554444432 22222211 011
Q ss_pred -------cCHHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 190 -------MNPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 190 -------~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
...++|++++. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.||--
T Consensus 237 ~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~TGfGR-- 308 (504)
T PLN02760 237 TEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY------DILFIADEVICAFGR-- 308 (504)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEecchhhCCcc--
Confidence 11245676664 22344544433334477777 99999999999 999999999966521
Q ss_pred cCCCCccc-cCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-.... +++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.......+.....+|. +-+.....+..++|
T Consensus 309 tG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~-i~-d~~~~~~~~~~~~~h~~T~--~gnPl~~Aaala~L 381 (504)
T PLN02760 309 LGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE-IS-DVIHSQSNKLGSFAHGFTY--SGHPVSCAVALEAL 381 (504)
T ss_pred cchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH-HH-hhhhcccccccCcccCCCC--CCCHHHHHHHHHHH
Confidence 11111111 222 2575554 4555443 35666766532 21 2211110000111112232 22335666666777
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCC----C--C---HHHHHHHHHhcCcEe
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA----H--T---VFEISEGLRKFGWIV 402 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~--~---~~~l~~~L~~~G~~v 402 (498)
+.+..+ +..++..++.++|.+.|+++....++..-. ..-++.+.+.++.. . + ...+.+.|.++|+++
T Consensus 382 e~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 458 (504)
T PLN02760 382 KIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLV 458 (504)
T ss_pred HHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEE
Confidence 766554 456777778888888887653222222111 22355555532211 1 0 346788899999886
Q ss_pred eeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCccc
Q 010897 403 PAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSR 450 (498)
Q Consensus 403 ~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~ 450 (498)
.. .+ ..+|++....+|.+++|++++.++++++.+++.-.+
T Consensus 459 ~~-------~g-~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~~~~ 498 (504)
T PLN02760 459 RV-------AG-DNIMMSPPLIITPEEVDELISIYGKALKATEERVAE 498 (504)
T ss_pred Ee-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 11 358888666789999999999999999887544333
No 305
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.55 E-value=1.5e-12 Score=128.34 Aligned_cols=290 Identities=20% Similarity=0.133 Sum_probs=190.4
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh----H
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV----C 166 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~----~ 166 (498)
|....+|.. ++.+.|.+. ....++|..|+..+++.+... ++.||+....|. -
T Consensus 77 Pt~~~le~~----iaal~ga~~-------~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT~~~ 132 (409)
T KOG0053|consen 77 PTRDVLESG----IAALEGAAH-------ALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGTLRI 132 (409)
T ss_pred CchHHHHHH----HHHHhCCce-------EEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccHHHH
Confidence 444455544 899999874 677777777888888777532 467888776555 4
Q ss_pred HHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 167 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
+.+....+|++...+.++ |++++++++.++|.+|++-.|+||+..+-|+++|.++|+++ |++++||..
T Consensus 133 l~~~~~~~gie~~~vd~~------~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~------g~~vvVDnT 200 (409)
T KOG0053|consen 133 LRKFLPKFGGEGDFVDVD------DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKY------GFLVVVDNT 200 (409)
T ss_pred HHHHHHHhCceeeeechh------hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhC------CCEEEEeCC
Confidence 555666789888888764 47889999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe--EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHH
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~--g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~ 324 (498)
+++++ +..| + . -++|+++-|..||+.+...+ |.++.+..+. ...+.....+++.. ..
T Consensus 201 f~~p~--~~~p-L--~---lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~-~~~l~~~~~~lg~~------------~~ 259 (409)
T KOG0053|consen 201 FGSPY--NQDP-L--P---LGADIVVHSATKYIGGHSDVIGGSVVLNSEEL-ASRLKFLQEDLGWC------------ED 259 (409)
T ss_pred cCccc--ccCh-h--h---cCCCEEEEeeeeeecCCcceeeeEEecCcHHH-HHHHHHHHHHhcCC------------CC
Confidence 98863 1221 1 1 25999999999999888775 5555443322 22222222334332 12
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeeCC---------------CCccEEEEEecCCCCCCH
Q 010897 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 325 ~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~ 388 (498)
.+..|..+ .|...+.-++++..+++..+++.|++.|.++ ++.+. ...+.++|..... .-..
T Consensus 260 p~~~~ll~--Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~-~~~a 336 (409)
T KOG0053|consen 260 PFDLFLLS--RGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN-EEHA 336 (409)
T ss_pred HHHHHHHh--cCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC-HHHH
Confidence 23333333 3445566778888889999999999888776 43321 0223355554332 1123
Q ss_pred HHHHHHHHhc------CcEe---eeecCC-----C-----CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 389 FEISEGLRKF------GWIV---PAYTMP-----A-----NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 389 ~~l~~~L~~~------G~~v---~~~~~~-----~-----~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.++.+.|.=. |-.- ..+++. . ..-..+.+|+||+- |+++.++.|+.++++.+
T Consensus 337 ~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 337 KKFYDALKLFTKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHHhhhhhhcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 4555555332 2110 001111 0 01235789999983 78888888888888754
No 306
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=7.3e-12 Score=123.08 Aligned_cols=336 Identities=15% Similarity=0.117 Sum_probs=203.6
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcC-CCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~~----~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+.+.+++. ...+|.+.+++.+.+++-++....+. .+...++.+.|+++.+ .+ .+.++++|+
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~--~~~~~~la~~L~~~s~~~d-------~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFY--NEPQAELAEKLVELSPFAD-------RVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccC--ChHHHHHHHHHHhhCcccc-------EEEEcCCcH
Confidence 3555555444332 23578899999887776443222222 1233366677888886 43 399999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-chhHHHH---------HHHHcC---CeeEEEEecCCccccCHHH
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEK---------FARYFE---VELKEVKLEEGYYVMNPVK 194 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~-~h~~~~~---------~~~~~g---~~~~~v~~~~~~~~~d~~~ 194 (498)
||+-.|+..+|+.. + +.++.+||.-.. .|.-..- .-+.++ -.++.||. -|+++
T Consensus 111 EA~EaAiKlARk~~-------~-~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf------nDi~a 176 (404)
T COG4992 111 EANEAALKLARKYT-------G-DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF------NDIEA 176 (404)
T ss_pred HHHHHHHHHHHHHc-------C-CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC------CCHHH
Confidence 99999999986641 1 123456765444 3331111 111121 01344442 47999
Q ss_pred HHHHhhhCCeEEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCee
Q 010897 195 AVELVDENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVK 269 (498)
Q Consensus 195 L~~~i~~~t~~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~d 269 (498)
++++|+++|.+|++--..-.-|.+- =++++.+||++| |++++.|+++.|+-- ...-+.+. +++ ..|
T Consensus 177 l~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~------g~LLI~DEVQtG~GR--TGk~fA~e~~gV-~PD 247 (404)
T COG4992 177 LEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH------GALLILDEVQTGLGR--TGKLFAYEHYGV-EPD 247 (404)
T ss_pred HHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh------CeEEEEeccccCCCc--cchHHHHHHhCC-CCC
Confidence 9999999999988876666666663 377899999999 999999999987521 10000000 111 146
Q ss_pred EEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 010897 270 SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMG 349 (498)
Q Consensus 270 si~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~ 349 (498)
++++ -|-++++..+|.++.+ +... .. +.+.-.+ .+| --++....+..++++.+.++++ .++..+
T Consensus 248 I~tl--aK~LgGG~PigA~la~-~~~~-~~--~~~G~Hg---STf----GGNpLacAv~~a~l~~l~~e~l---l~~v~~ 311 (404)
T COG4992 248 ILTL--AKALGGGFPIGAMLAT-EEIA-SA--FTPGDHG---STF----GGNPLACAVALAVLEVLLEEGL---LENVRE 311 (404)
T ss_pred EEEe--eccccCCccceeeEEc-hhhh-hc--CCCCccc---CCC----CcCHHHHHHHHHHHHHHcchhH---HHHHHH
Confidence 5544 5777777889999876 3211 11 1111111 111 1112444555566666666654 455666
Q ss_pred HHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCH
Q 010897 350 NARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSR 427 (498)
Q Consensus 350 ~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~ 427 (498)
..++|.+.|+++. .+.++.+-. ..-++-+.+..+ .....+.+.|.++|+.+.. .+.+++|+.--...++
T Consensus 312 ~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~--~~a~~~~~~~~~~gvL~~~-------a~~~ViR~~PpL~i~~ 382 (404)
T COG4992 312 KGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP--YRARDIVRALREEGVLVLP-------AGPNVIRFLPPLVITE 382 (404)
T ss_pred HHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc--ccHHHHHHHHHHCCeEEec-------CCCCeEEecCCccCCH
Confidence 7777777777653 122332211 233455666432 2467999999999987532 2345899997777899
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010897 428 SLVERLISHIEEVLKEIE 445 (498)
Q Consensus 428 ~~~~~l~~~l~~~l~~l~ 445 (498)
++++..++.++++++...
T Consensus 383 eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 383 EEIDEALDALERALAAAS 400 (404)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999987643
No 307
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.54 E-value=1.5e-12 Score=127.82 Aligned_cols=312 Identities=16% Similarity=0.123 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCcceeeec-ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHc
Q 010897 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF 174 (498)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~ 174 (498)
|-+.+..-+-+..|++.- ....... -..+++.+++.+++.+. ....|+.+...|.+..+++..+
T Consensus 57 ltn~l~~d~~~~~G~~~~----~~~~~vP~atgm~l~l~l~~l~~r~-----------~a~~Viw~ridqkSc~kai~~A 121 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLRSV----KSCFVVPMATGMSLTLCLLALRMRP-----------KAKYVIWPRIDQKSCFKAIERA 121 (389)
T ss_dssp HHHHHHHHHHHHTTHTTH----CEEEEESS-HHHHHHHHHHHHHHHC-----------T--EEEEEEEETHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCccc----cceEEEecccccHHHHHHHHHhccc-----------CCceEEEeeccccchHHHHHhc
Confidence 334444445556788741 1133333 33455556777776220 1248999999999999999999
Q ss_pred CCeeEEEEec--CCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccC-HHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 175 EVELKEVKLE--EGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 175 g~~~~~v~~~--~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
|++++.||.. +|....|++.+++.+++ +..+.+++..+...|..-| +.+|+++|++| |++.++-+|||
T Consensus 122 Gl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~------~IPhlvNnAYg 195 (389)
T PF05889_consen 122 GLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY------DIPHLVNNAYG 195 (389)
T ss_dssp T-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH------T--EEEEGTTT
T ss_pred CCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc------CCceEEccchh
Confidence 9999999963 45566778888888864 4577777877777788855 99999999999 99999999999
Q ss_pred cccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHH
Q 010897 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (498)
Q Consensus 249 g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~ 328 (498)
--.- .....+..-.+..++|.+.-+.-|-+++|.|-+.+...++..+ ......|-+.- ++ ...+-.
T Consensus 196 vQ~~-~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i---~~vs~~YpGRa--------s~--sp~ld~ 261 (389)
T PF05889_consen 196 VQSS-KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGI---LAVSKEYPGRA--------SA--SPSLDL 261 (389)
T ss_dssp TT-H-HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHH---HHHHHTSHSHB--------TS--HHHHHH
T ss_pred hhHH-HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHH---HHHHHHhhhhh--------hc--ccchHH
Confidence 7221 0111111112334688888899999999999887775543221 11223344332 22 455667
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCCCccEEEEEecCCC---CCCHHHHHHHHHhcCcEe
Q 010897 329 YYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSS---AHTVFEISEGLRKFGWIV 402 (498)
Q Consensus 329 ~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~---~~~~~~l~~~L~~~G~~v 402 (498)
...|..+|..||...+....+.-.++.++|++.. +-++...|...-.++|.+..-. .-+...|...|..+|+.-
T Consensus 262 ~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG 341 (389)
T PF05889_consen 262 FITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSG 341 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEES
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCccc
Confidence 7888899999999999999998888888886532 2445444433345666764221 124579999999998754
Q ss_pred eeecCCCCCC--------CeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 403 PAYTMPANAE--------NVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 403 ~~~~~~~~~~--------~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
.....+.... ...+|-++-....+++|+|.|++.|+++++
T Consensus 342 ~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 342 IRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 3322222111 226788866677899999999999999875
No 308
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=2.9e-12 Score=122.09 Aligned_cols=343 Identities=14% Similarity=0.120 Sum_probs=214.8
Q ss_pred ChHHHHHHHHHHhccCCC-------CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceee--ecChhHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG--TVGSSEAIMLAGLAFK 138 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--t~g~sea~~la~~a~~ 138 (498)
.+..+.|++-..+..-+. +|..-....++|.-|++..-+.||++++ .||+- .-+||-||+.+-.++.
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~----kWGVNVQp~SGSPANfavYtall 127 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPE----KWGVNVQPYSGSPANFAVYTALL 127 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHH----HCceeeccCCCCchhhHHHhhhc
Confidence 345566666655543221 2222335578888899888899999873 34543 3488999976666665
Q ss_pred HHHHHHHHhcCCCCCCcEEE---EcCCchhHHHHHHH--H-cCC----eeEEEEecCCccccCHHHHHHHhhh-CCeEEE
Q 010897 139 RKWQQKRKEQGKPYDKPNIV---TGANVQVCWEKFAR--Y-FEV----ELKEVKLEEGYYVMNPVKAVELVDE-NTICVA 207 (498)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~Iv---~s~~~h~~~~~~~~--~-~g~----~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~ 207 (498)
.+ .++|. .|+-.|-+..-... . ... +-....+++.++-||.|.|++.... +|++|+
T Consensus 128 ~P-------------h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~ii 194 (477)
T KOG2467|consen 128 KP-------------HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLII 194 (477)
T ss_pred CC-------------CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEE
Confidence 43 12343 45555553322211 1 111 1122335556678999999976544 677653
Q ss_pred EeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCc-ccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeE
Q 010897 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (498)
Q Consensus 208 ~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~-~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g 286 (498)
.|.+.....-|.+++.++|.+. +.++.+|-|| +|.++.-..|.+ .+.+|+++...||.|-+|.| |
T Consensus 195 --aG~SaY~R~~DYaR~R~Iad~~------gA~Lm~DMAHISgLVAA~vipsP-----Fey~DiVTTTTHKsLRGPRg-~ 260 (477)
T KOG2467|consen 195 --AGTSAYSRLIDYARFRKIADKV------GAYLMADMAHISGLVAAGVIPSP-----FEYCDIVTTTTHKSLRGPRG-A 260 (477)
T ss_pred --eccccchhhccHHHHHHHHHhc------CceeehhhhhHHHHHhcccCCCc-----ccccceeeccccccccCCcc-e
Confidence 4556666777899999999999 9999999999 555432222221 24799999999999988876 5
Q ss_pred EEEEeCCC-CCCcccccccCccCCC----CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010897 287 WVVWRTKD-DLPDELVFHINYLGSD----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 287 ~~~~~~~~-~l~~~~~~~~~yl~~~----~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
++++|.-- ...........|-..+ ....+++|.+....+.++..+|+.-....|++..++..++++.|.+.|.+.
T Consensus 261 mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 261 MIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred eEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66666521 1110000111111111 112235555555677888889988888889999999999999999999999
Q ss_pred CCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCC--CCCeeEEEEeecC----CCCHHHHHHHHH
Q 010897 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPAN--AENVAVLRVVVRE----DFSRSLVERLIS 435 (498)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~--~~~~~~lRv~v~~----~~t~~~~~~l~~ 435 (498)
+ ++++.......+|.+.+.+ .++|...+-+.|..-+|.+..-+.|.+ ....+.+|+..-. .+.+++.+++.+
T Consensus 341 G-y~lvtgGTDnHlvLvDLr~-~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~ 418 (477)
T KOG2467|consen 341 G-YKLVTGGTDNHLVLVDLRP-KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVAD 418 (477)
T ss_pred C-ceEecCCccceEEEEeccc-cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHH
Confidence 7 8998876677899999964 467765555555554544332222221 2234458887533 344567777666
Q ss_pred HHHHHHHH
Q 010897 436 HIEEVLKE 443 (498)
Q Consensus 436 ~l~~~l~~ 443 (498)
-|.++++.
T Consensus 419 fi~~av~i 426 (477)
T KOG2467|consen 419 FIDRAVKI 426 (477)
T ss_pred HHHHHHHH
Confidence 66666654
No 309
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.52 E-value=9.1e-12 Score=121.53 Aligned_cols=320 Identities=15% Similarity=0.070 Sum_probs=200.5
Q ss_pred CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh
Q 010897 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (498)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~ 165 (498)
.|....+..++...+.+.....++.|... +-..++|+|.+.+...++..+.++ ++.|++...++.
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~--~wdiiit~G~t~~l~~~l~~~~N~-------------gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK--NWDIIITNGNTDGLFKVLRTLINR-------------GDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCC--CceEEEecCCchHHHHHHHHhhcC-------------CCceEEecccch
Confidence 45556677777766655444355555432 235899999999999999988775 578999999999
Q ss_pred HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---------CCeEEE-EeeccCCcccccCH---HHHHHHHHHhh
Q 010897 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---------NTICVA-AILGSTLTGEFEDV---KLLHDLLTKKN 232 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---------~t~~v~-~~~~~t~tG~~~~l---~~I~~la~~~~ 232 (498)
+-....+.+|+.++.|+++++ .+|+|.|++.+.. ++.+++ +-.+.||||....+ ++|.+||++|
T Consensus 160 ~AL~s~~a~gv~~ipv~md~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy- 236 (472)
T KOG0634|consen 160 SALQSMEALGVKIIPVKMDQD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY- 236 (472)
T ss_pred HHHHhccccCceEEeccccCC--CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-
Confidence 999999999999888888765 4999999999864 244333 34588999998766 4699999999
Q ss_pred cccCCCceEEEecCcccccccccCCCCc-----c-----------cc---CCCCeeEEEEcCCccCCCCCCeEEEEEeCC
Q 010897 233 EETGWDTPIHVDAASGGFIAPFLYPDLE-----W-----------DF---RLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (498)
Q Consensus 233 ~~~~~~~~l~vD~A~~g~~~~~~~~~~~-----~-----------~~---~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~ 293 (498)
|++|+.|+.|.-...+-+.+..+ + .| ..++-+.-.-+..|.+..+.+.||+-..+.
T Consensus 237 -----DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~ 311 (472)
T KOG0634|consen 237 -----DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL 311 (472)
T ss_pred -----CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH
Confidence 99999999997654321111110 0 01 112222233467899988999999864432
Q ss_pred CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHH----HHHHHHHHHhc-CCC--eEE
Q 010897 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMG----NARALREGLEK-TGR--FEI 366 (498)
Q Consensus 294 ~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~----~a~~l~~~L~~-~~~--~~~ 366 (498)
.+.+. +... ..+..+ .++..-.-+++.|++.|.+||.+.+.+++. .+..+..+|.+ +|. +++
T Consensus 312 -~l~ri-------l~~a--e~~t~~-pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~ 380 (472)
T KOG0634|consen 312 -FLKRI-------LDLA--EVATSG-PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEY 380 (472)
T ss_pred -HHHHH-------hhhc--ceeecC-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEE
Confidence 12111 1110 111111 222333347778888899998887777664 66666777765 443 455
Q ss_pred eeCCCCccEEEEEec-----CCCCCC-H-HHHHHHHHhcCcEeeeec-C---CCCCCCeeEEEEeecCCCCHHHHHHHHH
Q 010897 367 LSKDVGVPLVAFSLK-----DSSAHT-V-FEISEGLRKFGWIVPAYT-M---PANAENVAVLRVVVREDFSRSLVERLIS 435 (498)
Q Consensus 367 ~~~~~~~~~v~f~~~-----~~~~~~-~-~~l~~~L~~~G~~v~~~~-~---~~~~~~~~~lRv~v~~~~t~~~~~~l~~ 435 (498)
.++. ...|+.++++ .++.++ . +.+...+.++|+.+.... + |....+.-++|+++.. ...+++++-++
T Consensus 381 ~~P~-aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~ 458 (472)
T KOG0634|consen 381 HPPK-AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIE 458 (472)
T ss_pred ecCC-cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHH
Confidence 5443 4556666774 012344 2 455567788998764322 1 2222233589999853 24444443333
Q ss_pred HHHHHH
Q 010897 436 HIEEVL 441 (498)
Q Consensus 436 ~l~~~l 441 (498)
.+..++
T Consensus 459 rf~~~i 464 (472)
T KOG0634|consen 459 RFGSVI 464 (472)
T ss_pred HHHHHH
Confidence 333333
No 310
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=2.6e-11 Score=125.82 Aligned_cols=345 Identities=14% Similarity=0.058 Sum_probs=196.0
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~----~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.++.. .+.+|.+.+++.+.+++-...... ....+.+.++.+.|++++.-.. ....++++|+|
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGse 114 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG-VIYYESILKLAEELAEITPGGL-----DCFFFSNSGAE 114 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHH
Confidence 5666554444322 235688889998888763322111 1123444566677888772111 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcCC-------------eeEEEEecCCccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV----- 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~----- 189 (498)
|+..|++.++.- .| ++.|+ +....|.+..-+....+- .+..+|.... +.
T Consensus 115 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 182 (433)
T PRK08117 115 AIEGALKLAKHV-------TK----RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYC-DRCPKGE 182 (433)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcc-ccccccC
Confidence 999999987642 12 34454 455567655444322221 1233443211 11
Q ss_pred -------cCHHHHHHHhhh-----CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 190 -------MNPVKAVELVDE-----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 190 -------~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
-|++.|++.++. +..+|++--.....|.+.| +++|.++|++| |+++++|++|+|+..
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~gr- 255 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH------GILLIFDEVQTGFGR- 255 (433)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhccCc-
Confidence 256667777642 3445555444444577777 99999999999 999999999987521
Q ss_pred ccCCCCc-cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~-~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...... ..+++ ..|. ++.-|.+.++..+|+++.+++ .. +.+. . . ....+ ++-+.....+..++|
T Consensus 256 -~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pigav~~~~~-i~-~~~~--~----~-~~~~T--~~~np~~~aaa~a~L 320 (433)
T PRK08117 256 -TGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSAVVASKE-LM-EQWP--L----G-SHGTT--FGGNPVACAAALATL 320 (433)
T ss_pred -cccchhHhhcCC-CCCE--eehhhhccCCCcceeEEEcHH-HH-hhcc--C----C-CCCCC--CCcCHHHHHHHHHHH
Confidence 111000 01122 1354 355677766677888876542 21 1110 0 0 01112 222334555566666
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCCcc-EEEEEecCCC----CCCHHHHHHHHHhcCcEeeeec
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVP-LVAFSLKDSS----AHTVFEISEGLRKFGWIVPAYT 406 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~~----~~~~~~l~~~L~~~G~~v~~~~ 406 (498)
+.+..+ ...++..++.+++.+.|+++. .+.++....+.+ ++.+.+.+++ ......+.+.|.++|+++...
T Consensus 321 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~- 396 (433)
T PRK08117 321 EVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC- 396 (433)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec-
Confidence 655443 345666667777777776642 111222111222 3344553221 112456788899999876321
Q ss_pred CCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 407 MPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 407 ~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
.....++|++....+|.++++++++.|.++++++.
T Consensus 397 ----g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 397 ----GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred ----CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 12246799998778899999999999999987653
No 311
>PLN00144 acetylornithine transaminase
Probab=99.50 E-value=3.3e-11 Score=122.81 Aligned_cols=331 Identities=15% Similarity=0.009 Sum_probs=185.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++-......+ ..+...++.+.|+++.+.+ ...++++||||+..|++.++... .++
T Consensus 31 h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~-~~~- 99 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLAHVSNVY--HTIPQVELAKRLVASSFAD-------RVFFCNSGTEANEAAIKFARKYQ-RVR- 99 (382)
T ss_pred CCCHHHHHHHHHHHHhcCCccccc--cCHHHHHHHHHHHhcCCCC-------eEEEeCCcHHHHHHHHHHHHHHH-hcc-
Confidence 446888888888887632211111 1233345666677765432 38999999999999999886532 111
Q ss_pred hcCCCC------CCcEEEE-cCCchhHHHHHHHHcCCeeE---EEEecCCcc---ccCHHHHHHHhhh-CCeEEEEeecc
Q 010897 147 EQGKPY------DKPNIVT-GANVQVCWEKFARYFEVELK---EVKLEEGYY---VMNPVKAVELVDE-NTICVAAILGS 212 (498)
Q Consensus 147 ~~g~~~------~~~~Iv~-s~~~h~~~~~~~~~~g~~~~---~v~~~~~~~---~~d~~~L~~~i~~-~t~~v~~~~~~ 212 (498)
|.+. .+++|+. ....|....-+....+-... ..|..++.. --|++.|++.+.. ++.+|++.-..
T Consensus 100 --~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q 177 (382)
T PLN00144 100 --APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQ 177 (382)
T ss_pred --CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEcccc
Confidence 1110 0345554 44566654444433332110 011101000 0278999988864 35556555444
Q ss_pred CCcccc--cC--HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEE
Q 010897 213 TLTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGW 287 (498)
Q Consensus 213 t~tG~~--~~--l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~ 287 (498)
++.|.+ ++ +++|.++|++| |+++++|+++.++.. ....... .+++ ..|. ++.-|.+.++..+|+
T Consensus 178 ~~gg~~~~~~~~~~~l~~l~~~~------g~llI~DEv~tg~gr--~g~~~~~~~~~~-~PDi--~t~sK~l~~G~pig~ 246 (382)
T PLN00144 178 GEGGIYPATKEFLQGLRALCDEA------GALLVFDEVQCGLGR--TGYLWAHEAYGV-EPDI--MTLAKPLAGGLPIGA 246 (382)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchHhhhhhcCC-CCCE--EEecccccCCcceEE
Confidence 553443 34 88999999999 999999999987631 1111111 1122 1453 344688877788999
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEE
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMG-NARALREGLEKTGRFEI 366 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~-~a~~l~~~L~~~~~~~~ 366 (498)
++.+.+ .. +.+. ......+ ++-+.....+..+.|..+..+.+.+.+++..+ +.+.+.+.+.+.|.+.-
T Consensus 247 v~~~~~-~~-~~~~-------~~~~~~T--~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~ 315 (382)
T PLN00144 247 VLVTEK-VA-SAIN-------PGDHGST--FAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKE 315 (382)
T ss_pred EEEcHH-HH-hccC-------CCCCCCC--CCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 987542 21 1111 0011112 22222445556666677755555444444333 23333444444543211
Q ss_pred eeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.. ...++.+.+. .+...+.+.+.++|+.+... ....++|++.....+.++++..++.|++++..+
T Consensus 316 vrg--~G~~~~l~l~----~~~~~~~~~~~~~Gv~i~~~------~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 316 VRG--VGLLVGIQLD----VPAGPLVDACRDSGLLVLTA------GKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eec--CceEEEEEec----CccHHHHHHHHHCCeEEeec------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 111 2334445552 23468999999999887432 113679999877688999999999999888654
No 312
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=5.1e-13 Score=130.52 Aligned_cols=302 Identities=16% Similarity=0.093 Sum_probs=184.5
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH
Q 010897 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (498)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~ 170 (498)
-+...+..++.+.+|+++|.+.. .+|..| -..|-+.+-++.. ++..|+-.+..|.++...
T Consensus 178 ~G~~~~hkelE~l~A~f~g~e~a------~vF~mG-f~TNs~~~p~l~~-------------~gsLIiSDelNHaSi~~G 237 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLGVEDA------IVFSMG-FATNSMNIPSLLG-------------KGSLIISDELNHASLITG 237 (519)
T ss_pred cccHHHHHHHHHHHHHhcCCcce------EEEecc-ccccccCcceeec-------------CCcceeeccccchheecc
Confidence 37778888899999999999861 333322 2222112222211 135777888999999999
Q ss_pred HHHcCCeeEEEEecCCccccCHHHHHHHhhh-------CC-----eEEEEeeccC-CcccccCHHHHHHHHHHhhcccCC
Q 010897 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NT-----ICVAAILGST-LTGEFEDVKLLHDLLTKKNEETGW 237 (498)
Q Consensus 171 ~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-------~t-----~~v~~~~~~t-~tG~~~~l~~I~~la~~~~~~~~~ 237 (498)
|++.|+.++....+ |+..|++.+.+ +| +.+++.-+-. .-|.+.++.++.++.|++
T Consensus 238 aRLSgAtiRVfkHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky------ 305 (519)
T KOG1357|consen 238 ARLSGATTRVFRHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY------ 305 (519)
T ss_pred ccccCceEEEEecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc------
Confidence 99999999888754 34444444433 22 3344333333 459999999999999999
Q ss_pred CceEEEecCcccccccccCCCCc--cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCcc
Q 010897 238 DTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFT 315 (498)
Q Consensus 238 ~~~l~vD~A~~g~~~~~~~~~~~--~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~ 315 (498)
.++++.|+||+.++.+-...... +-.+-..+|.+...+.|.+.+. |..+..++ .+.+.+..+..+.. +
T Consensus 306 kayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~---GGyiagsk-~lid~lrt~s~~~~-----y- 375 (519)
T KOG1357|consen 306 KAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA---GGYIAGSK-ELIDYLRTPSPSAL-----Y- 375 (519)
T ss_pred cEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc---cceecCcH-HHHhhhccCCCcee-----e-
Confidence 99999999998776422111000 0112234788888888876542 22332222 23232222211111 1
Q ss_pred ccCCCchHHHHHHH-HHHHH-hc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHH
Q 010897 316 LNFSKGSSQIIAQY-YQFIR-LG---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFE 390 (498)
Q Consensus 316 l~~sr~~~~~~a~~-~~l~~-lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~ 390 (498)
.+.....++.|- .+++. .| .+.-++.++++.+++.+++..|.+.+ |.++... ..+++..-+..+. ....
T Consensus 376 --at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-fivyG~~-dSpVvplll~~~~--k~~~ 449 (519)
T KOG1357|consen 376 --ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-FIVYGNN-DSPVVPLLLYGPA--KIVA 449 (519)
T ss_pred --cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-EEEecCC-CCCcceeeecCcc--cccH
Confidence 111112333333 22222 23 34568889999999999999999986 8888765 4555554432221 2237
Q ss_pred HHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 391 ISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 391 l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+.++|.++++.+....+|....-....|++...+++.|+.+++++.+.++
T Consensus 450 f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 450 FSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred HHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 77889998877665555554444455799999999988887776665544
No 313
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=9.9e-11 Score=121.32 Aligned_cols=330 Identities=13% Similarity=0.039 Sum_probs=190.2
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+.+.......+ ...+.+.++.+.|.+++..+. ....++++||||+..|++.++..
T Consensus 57 h~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~------ 124 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLIHYTPIY-GFPVEPLLLAEKLIEIAPGDN-----PKVSFGLSGSDANDGAIKFARAY------ 124 (443)
T ss_pred CCCHHHHHHHHHHHHhccCccccc-cCcHHHHHHHHHHHHhCCCCC-----CEEEEcCCHHHHHHHHHHHHHHh------
Confidence 346888888888887643221111 112334466667888765331 24899999999999999988653
Q ss_pred hcCCCCCCcEEEEc-CCchhHHHHHHHHcCC------------eeEEEEecCCccc------------cCHHHHHHHhh-
Q 010897 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEV------------ELKEVKLEEGYYV------------MNPVKAVELVD- 200 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s-~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~------------~d~~~L~~~i~- 200 (498)
.| +..|+.- ...|....-+....|. ++..+|... .+. -+++.+++.+.
T Consensus 125 -tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (443)
T PRK08360 125 -TK----RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPD-CYRCPFGKEPGSCKMECVEYIKEKFEG 198 (443)
T ss_pred -cC----CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCc-cccccccCchhhhHHHHHHHHHHHHHh
Confidence 12 3456543 3455543333333331 133333321 011 12345666663
Q ss_pred ----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEE
Q 010897 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (498)
Q Consensus 201 ----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi 271 (498)
+++.+|++.-..+++|.+.+ +++|.++|+++ |+++++|++|.++.. ...-... .+++ ..|.+
T Consensus 199 ~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr--~G~~~a~~~~~~-~pDii 269 (443)
T PRK08360 199 EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH------GILLVVDEVQSGLGR--TGKWFAIEHFGV-EPDII 269 (443)
T ss_pred ccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CccchhhhhcCC-CCCEE
Confidence 34677777655578898755 88999999999 999999999987531 1110000 1122 13555
Q ss_pred EEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (498)
Q Consensus 272 ~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a 351 (498)
++ .|.+.++..+|+++.+.+ .. +.+. .....++ ++-+.....+..++|+.+..+. ..++..++.
T Consensus 270 tl--sK~l~~G~pigav~~~~~-i~-~~~~-------~~~~~~T--~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g 333 (443)
T PRK08360 270 TL--GKPLGGGLPISATIGRAE-IM-DSLP-------PLAHAFT--LSGNPVASAAALAVIEEIEEKN---LLKRAEKLG 333 (443)
T ss_pred Ee--cccccCCceeEEEEEcHH-HH-hhhc-------CCCCCCC--CCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHH
Confidence 54 677766677899886532 21 2111 0001112 2222234455556666654443 456666677
Q ss_pred HHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCC---CC---CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC
Q 010897 352 RALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS---AH---TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE 423 (498)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~---~~---~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~ 423 (498)
++|.+.|+++- .+.++.... ..-++.+.+.++. .. ....+..+|.++|+++... ....+|++...
T Consensus 334 ~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lr~~P~l 406 (443)
T PRK08360 334 NYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF-------SGNVLRIQPPL 406 (443)
T ss_pred HHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec-------CCCEEEEeCCC
Confidence 77777766531 122222211 2234445553211 11 1357888999999876421 13569998888
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHc
Q 010897 424 DFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 424 ~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
.+|+++++++++.++++++.+++
T Consensus 407 ~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 407 TIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999988743
No 314
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=7e-11 Score=122.46 Aligned_cols=326 Identities=13% Similarity=-0.003 Sum_probs=184.2
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+........ .....+.+.++.+.|++++..+. .....++++||||+..|++.++..
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~----~~~v~f~~SGsEA~e~AlklAr~~------ 138 (441)
T PRK05769 70 HAHPKVVKAVKEQAEKFLHYSL-TDFYYEPAVELAERLVEIAPGGF----EKKVFFTNSGTESNEAAIKIARYH------ 138 (441)
T ss_pred CCCHHHHHHHHHHHHhccCccC-cccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHH------
Confidence 3468888888888775322111 11123344567777888764211 024899999999999999988753
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCccc-----c--------CHHHHHH-H
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV-----M--------NPVKAVE-L 198 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----~--------d~~~L~~-~ 198 (498)
.| +++|+. ....|....-+....+. ++..++... .++ - +++.+++ .
T Consensus 139 -tg----r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~~ 212 (441)
T PRK05769 139 -TG----RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPN-PYRNPWGIENPEECGNAVLDFIEDYL 212 (441)
T ss_pred -hC----CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCc-cccccccCCchHHHHHHHHHHHHHHH
Confidence 12 345655 44556544433333221 133343321 011 1 1234555 3
Q ss_pred hh-----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-cccCCCCe
Q 010897 199 VD-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLV 268 (498)
Q Consensus 199 i~-----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~~~~~~ 268 (498)
++ ++..+|++-......|.+.| +++|.++|+++ |+++++|+++.|+.. ...-.. ..+++ ..
T Consensus 213 ~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~tG~gr--~G~~~a~~~~gv-~p 283 (441)
T PRK05769 213 FKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY------GILLIDDEVQTGMGR--TGKMFAIEHFGV-EP 283 (441)
T ss_pred HhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccceehhhccCC-CC
Confidence 32 23445554444444577778 99999999999 999999999987521 110000 01122 24
Q ss_pred eEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 010897 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 348 (498)
Q Consensus 269 dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~ 348 (498)
|.++++ |.+.++..+|+++.+.. .. .. ... ....|..+ +.....+..++|+.+.. +..++..
T Consensus 284 Divt~~--K~l~~G~p~gav~~~~~-i~-~~-------~~~-~~~~T~~g--~p~~~aaa~a~L~~l~~----~~~~~~~ 345 (441)
T PRK05769 284 DIITLA--KAIAGGLPLGAVIGRAE-LM-FL-------PPG-SHANTFGG--NPVAAAAALATLEELEE----GLLENAQ 345 (441)
T ss_pred CEEEEc--ccccCCcccEEEEEehh-hh-hc-------CCC-CCCCCCCc--CHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 766653 65555567888876643 21 11 100 01112212 23445555566665533 4566777
Q ss_pred HHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCC-CC---CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 349 GNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS-AH---TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 349 ~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~-~~---~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
++.++|.+.|+++. .+.++.... ...++.+.+.++. .. -...+.+.|.++|+++.. .+...+|++..
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~-------~~~~~lr~~p~ 418 (441)
T PRK05769 346 KLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG-------AGKSAIRIIPP 418 (441)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec-------CCCCEEEEeCC
Confidence 77888888776542 122222211 2334555553221 01 134677888999987632 12356999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010897 423 EDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 423 ~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..+|.++++++++.+++++..
T Consensus 419 l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 419 LIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 778999999999999998865
No 315
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=2.2e-11 Score=126.03 Aligned_cols=334 Identities=14% Similarity=0.077 Sum_probs=185.9
Q ss_pred cCCCCCcccccccC----CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~~----~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+++.+.++. +.+|.+.+++.+.++.....+ .....+.++.++|++++.- . ....++++|+|
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~----~~~~~~~~la~~L~~~~~~-~-----~~v~~~~sGse 117 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFG----APTELEVELAELVIELVPS-I-----EMVRMVNSGTE 117 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCC----CCCHHHHHHHHHHHHhCCC-C-----CEEEEecCHHH
Confidence 46665555554322 356888888888887632211 1233444677778777621 1 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-chhHHHHHHHHcCC-------e-----eEEEEecCCcc---ccCH
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------E-----LKEVKLEEGYY---VMNP 192 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~-~h~~~~~~~~~~g~-------~-----~~~v~~~~~~~---~~d~ 192 (498)
|+..|+..++.. .| +.+|+..+. .|....-+....|. . .+.++ .+.+ ..|+
T Consensus 118 A~e~Aik~a~~~-------~g----~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 184 (426)
T PRK00062 118 ATMSAIRLARGY-------TG----RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA--KHTLTAPYNDL 184 (426)
T ss_pred HHHHHHHHHHHH-------hC----CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc--cceEEcCCCCH
Confidence 999999988653 11 345665554 44443222221110 0 01110 0001 1378
Q ss_pred HHHHHHhhh---CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cC
Q 010897 193 VKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR 264 (498)
Q Consensus 193 ~~L~~~i~~---~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~ 264 (498)
+.+++.+.. ++.+|++......+|.+.| +++|.++|++| |+++++|++|.|+.. ....... ++
T Consensus 185 ~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~G~r~---g~~~~~~~~~ 255 (426)
T PRK00062 185 EAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH------GALLIFDEVMTGFRV---ALGGAQGYYG 255 (426)
T ss_pred HHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeechhcccc---CCccHHHHhC
Confidence 899988863 4566666655555788877 99999999999 999999999987621 1100001 12
Q ss_pred CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc-cCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHH
Q 010897 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~-~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~ 343 (498)
+ ..|.+ +..|.+.+++.+|+++.+. +.. +.+... ..+.. .+ ++.+.....+..++|..+..+ +.
T Consensus 256 ~-~pDi~--~~gK~l~~G~p~ga~~~~~-~i~-~~~~~~~~~~~~-----~T--~~~~p~~~aaa~a~L~~~~~~---~~ 320 (426)
T PRK00062 256 V-TPDLT--TLGKIIGGGLPVGAFGGRR-EIM-EQLAPLGPVYQA-----GT--LSGNPLAMAAGLATLKLLKEP---GF 320 (426)
T ss_pred C-CcchH--hhhhHhhCCCcceeeeEHH-HHH-HhhccCCCceec-----cc--CcCCHHHHHHHHHHHHHHhcc---hH
Confidence 1 13433 3457766656678776543 221 211100 00110 01 122224445555666655443 34
Q ss_pred HHHHHHHHHHHHHHHh----cCCCeEEeeCCCCccEEEEEecCCCC--------CC---HHHHHHHHHhcCcEeeeecCC
Q 010897 344 MENCMGNARALREGLE----KTGRFEILSKDVGVPLVAFSLKDSSA--------HT---VFEISEGLRKFGWIVPAYTMP 408 (498)
Q Consensus 344 ~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~~v~f~~~~~~~--------~~---~~~l~~~L~~~G~~v~~~~~~ 408 (498)
.++..++.+++.+.|+ +.+ +..-... ...++.+.+.++.. .+ ...+.+.|.++|+.+....
T Consensus 321 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~-- 396 (426)
T PRK00062 321 YEELEALTKRLAEGLKEAAKKAG-IPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ-- 396 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC--
Confidence 5556666666666665 344 3321111 34455555532110 01 2578899999998764321
Q ss_pred CCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 409 ANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 409 ~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...+|++ ..+|.++++++++.|+++++.+
T Consensus 397 -----~~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 397 -----FEAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred -----cCceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 1124554 5679999999999999998754
No 316
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.47 E-value=4.7e-11 Score=123.63 Aligned_cols=329 Identities=13% Similarity=0.027 Sum_probs=177.4
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++........ .......++.++++++.+.+.. ....++++|++|+..|+..++...
T Consensus 57 h~~~~i~~a~~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~----~~~~f~~sGsea~e~Alklar~~~----- 126 (425)
T PRK08088 57 HLHPKVVAAVEAQLKKLSHTCFQV-LAYEPYLELCEKMNQKVPGDFA----KKTLLVTTGSEAVENAVKIARAAT----- 126 (425)
T ss_pred CCCHHHHHHHHHHHhhCCCccccc-cCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHHh-----
Confidence 346888888888887643211110 1112233667778887654321 137889999999999998875431
Q ss_pred hcCCCCCCc-EEEEcCCchhHHHHHHHHcCCe-------------eEE--EEecCCcccc--CHHHHHHHhh-----hCC
Q 010897 147 EQGKPYDKP-NIVTGANVQVCWEKFARYFEVE-------------LKE--VKLEEGYYVM--NPVKAVELVD-----ENT 203 (498)
Q Consensus 147 ~~g~~~~~~-~Iv~s~~~h~~~~~~~~~~g~~-------------~~~--v~~~~~~~~~--d~~~L~~~i~-----~~t 203 (498)
| +. .|.+....|....-+....+-. +.. +|.+.++... +++.|+++++ ++.
T Consensus 127 --~----r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 200 (425)
T PRK08088 127 --K----RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDI 200 (425)
T ss_pred --C----CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCce
Confidence 1 23 4455555666544433322210 111 2221111111 1556888885 233
Q ss_pred eEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-cc-ccCCCCeeEEEEcCCc
Q 010897 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFRLPLVKSINVSGHK 277 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~~-~~~~~~~dsi~~s~hK 277 (498)
.+|++.-....-|.+.+ +++|.++|+++ ++++++|++|+++.. . ... .. .++. ..|. .+..|
T Consensus 201 aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~------~~~lI~Dev~~g~g~--~-g~~~~~~~~~~-~pdi--~s~sK 268 (425)
T PRK08088 201 AAIIIEPVQGEGGFYAASPAFMQRLRALCDEH------GIMLIADEVQTGAGR--T-GTLFAMEQMGV-AADL--TTFAK 268 (425)
T ss_pred EEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--C-cchhHHhhcCC-CCCE--EEEec
Confidence 44444333333355555 89999999999 999999999987531 1 111 11 1111 1343 45578
Q ss_pred cCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010897 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREG 357 (498)
Q Consensus 278 ~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 357 (498)
.+.++.++||++.+.. .. +.+. ......+ ++. ..+.+.+++..+..-...++.++..+..+++.+.
T Consensus 269 ~l~~G~rig~v~~~~~-~~-~~~~-------~~~~~~t--~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 334 (425)
T PRK08088 269 SIAGGFPLAGVTGRAE-VM-DAIA-------PGGLGGT--YAG---NPIACAAALAVLKVFEQENLLQKANALGEKLKDG 334 (425)
T ss_pred cccCCCcceeeEecHH-HH-hhcC-------CCCCCCC--CCc---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 7777788999986432 11 1111 1111111 121 2223333333332222334444555545555444
Q ss_pred Hh----cCCCeEEeeCCCCccEEEEEecCC------CCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCH
Q 010897 358 LE----KTGRFEILSKDVGVPLVAFSLKDS------SAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSR 427 (498)
Q Consensus 358 L~----~~~~~~~~~~~~~~~~v~f~~~~~------~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~ 427 (498)
|. +.|.+.-+.. ...++.+.+..+ +......+..++.++|+.+... . ...+++|++.....+.
T Consensus 335 l~~l~~~~~~~~~v~g--~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~----~-~~~~~iRl~~~~~~t~ 407 (425)
T PRK08088 335 LLAIAEKHPEIGDVRG--LGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSC----G-PYYNVLRILVPLTIED 407 (425)
T ss_pred HHHHHHhCCCeEEEec--cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecC----C-CCCCEEEEECCCCcCH
Confidence 43 3443222222 133455566321 1123578899999999775321 1 1136799999777899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010897 428 SLVERLISHIEEVLKEI 444 (498)
Q Consensus 428 ~~~~~l~~~l~~~l~~l 444 (498)
+++++.++.|+++++.+
T Consensus 408 ~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 408 AQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999888754
No 317
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.46 E-value=1.2e-10 Score=121.06 Aligned_cols=336 Identities=12% Similarity=0.038 Sum_probs=194.5
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+.+.......+ ..+...++.+.|++++..+. ....++++||||+..|++.++.... .
T Consensus 98 H~~p~v~~Ai~~ql~~l~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t~-~-- 167 (459)
T PRK11522 98 HRNPVVVSAVQNQLAKQPLHSQEL--LDPLRAMLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQS-P-- 167 (459)
T ss_pred CCCHHHHHHHHHHHhhCccccccc--CCHHHHHHHHHHHHhCCCCC-----CEEEEeCCchHHHHHHHHHHHHHhc-c--
Confidence 346888888888887643322111 23334456666777753221 2489999999999999998865421 0
Q ss_pred hcCCCCCCcEEEEcC-CchhHHHHHHHHcCCeeEE---EEecCCccc---cCHHHHHHHhhh------CCeEEEEeeccC
Q 010897 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVELKE---VKLEEGYYV---MNPVKAVELVDE------NTICVAAILGST 213 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~~~~~---v~~~~~~~~---~d~~~L~~~i~~------~t~~v~~~~~~t 213 (498)
.| +..||... ..|....-+....+-.... .|..++-.. -|++++++.++. +..+|++-....
T Consensus 168 -~g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g 242 (459)
T PRK11522 168 -RG----KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQG 242 (459)
T ss_pred -CC----CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccC
Confidence 01 23565544 5555444333333321111 111111000 267788887752 334555554444
Q ss_pred CcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEE
Q 010897 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGW 287 (498)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~ 287 (498)
..|.+.| ++++.++|+++ |+++++|+++.|+-- ...-... .+++ ..|.+++ -|.+.++ ..+|.
T Consensus 243 ~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~gv-~PDivt~--gK~lggG~~Piga 311 (459)
T PRK11522 243 EGGVILPPEGYLTAVRKLCDEF------GALLILDEVQTGMGR--TGKMFACEHENV-QPDILCL--AKALGGGVMPIGA 311 (459)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEeccceecCCc--cchhhhhhccCC-CCCEEEe--chhhhCCCcccee
Confidence 5577777 99999999999 999999999976521 1100000 1122 2466544 4655544 45787
Q ss_pred EEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-
Q 010897 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFE- 365 (498)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~- 365 (498)
++.+++ .. +.+... .+. ...| +.-+.....+..++|+.+..+. ..++..++.++|.+.|+++. .+.
T Consensus 312 v~~~~~-i~-~~~~~~-~~~----~~~T--~~gnp~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 379 (459)
T PRK11522 312 TIATEE-VF-SVLFDN-PFL----HTTT--FGGNPLACAAALATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPD 379 (459)
T ss_pred EEEcHH-HH-HHhccC-Ccc----cCCC--CCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 776642 21 111100 111 0111 2223355666667777775543 45777778888888887652 121
Q ss_pred EeeCC-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 366 ILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 366 ~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++..- ....++.+.+.++ .....+.+.|.++|+++... ..+..++|+.....+|+++++++++.|+++++++
T Consensus 380 ~i~~VrG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~-----~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 380 LVQEARGKGMLMAIEFVDN--EIGYNFASEMFRQRVLVAGT-----LNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred ceeeEEeceeEEEEEecCc--hHHHHHHHHHHHCCeEEEec-----CCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 21111 1245666666432 12467889999999887431 1234679999888899999999999999999887
Q ss_pred HcC
Q 010897 445 ESL 447 (498)
Q Consensus 445 ~~~ 447 (498)
.+.
T Consensus 453 ~~~ 455 (459)
T PRK11522 453 RVS 455 (459)
T ss_pred HHh
Confidence 654
No 318
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.45 E-value=1.2e-10 Score=117.30 Aligned_cols=302 Identities=17% Similarity=0.086 Sum_probs=179.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++-......++ .+...++.+.++++++.+. ..++++||||+..|++.++..
T Consensus 41 ~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-------v~~~~SGseA~e~Alklar~~------- 104 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVVAGPMFE--HEEKEEMLEELSKWVNYEY-------VYMGNSGTEAVEAALKFARLY------- 104 (364)
T ss_pred CCHHHHHHHHHHHHhcCCccCCcC--CHHHHHHHHHHHhhcCCCE-------EEEeCchHHHHHHHHHHHHHH-------
Confidence 457788888888776322111222 2233455566777776543 899999999999999988653
Q ss_pred cCCCCCCcEEEEcCC-chhHHHHHHHHc-------CCe-----eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCC
Q 010897 148 QGKPYDKPNIVTGAN-VQVCWEKFARYF-------EVE-----LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (498)
Q Consensus 148 ~g~~~~~~~Iv~s~~-~h~~~~~~~~~~-------g~~-----~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~ 214 (498)
.| +++|+..+. .|....-+.... +.. +..+| + -|++.+++.+.+++.+|++......
T Consensus 105 ~g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~-----~-~d~~~l~~~i~~~~aAvivEpi~g~ 174 (364)
T PRK04013 105 TG----RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP-----F-NDVEAAKEAITKETAAVIFEPIQGE 174 (364)
T ss_pred hC----CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec-----C-CCHHHHHHHhcCCcEEEEEcCCcCC
Confidence 12 356665554 444333222211 111 22222 2 2688899999888888776655444
Q ss_pred ccccc-C---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEE
Q 010897 215 TGEFE-D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (498)
Q Consensus 215 tG~~~-~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~ 289 (498)
.|.+. | +++|.++|+++ |++++.|+++.|+-. ..-... .+++ ..|.+++ -|.+.++..+|.++
T Consensus 175 gG~~~~~~~yl~~lr~lc~~~------gillI~DEv~tG~Rt---G~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~ 242 (364)
T PRK04013 175 GGIVPAKEEFVKTLRDLTEDV------GALLIADEVQSGLRT---GKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTL 242 (364)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCCC---CchhHHHhcCC-CCCEEEe--cccccCCceeEEEE
Confidence 45443 4 89999999999 999999999987521 111111 1122 2566665 46555556677777
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
.+.. . . ... ...| +.-+.....+..+.|..+.++++.+..++. |. .+.. +. +.+
T Consensus 243 ~~~~-~-~------~~~-----~~~T--~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~---v~~ 296 (364)
T PRK04013 243 TNFD-V-E------RGK-----HGST--FGGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ER---VVT 296 (364)
T ss_pred eccc-c-c------CCC-----cCCC--CCcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Cc---cee
Confidence 5542 1 0 000 1112 222235666677777777666654444332 22 2222 21 111
Q ss_pred CC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 370 DV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 370 ~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
-. ..-++.+.+.. ....+.+.+.++|+++.. .+.+++|+.-...+|+++++++++.|+++++.+
T Consensus 297 vRG~Gl~~gve~~~----~~~~i~~~~~~~Gll~~~-------~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 297 TRGRGLMIGIVLKK----PVGKYVEELQNRGYLVHT-------AGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred eeeCcEEEEEEeCC----cHHHHHHHHHhCCcEEee-------CCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 11 23355555532 245788999999988642 123679998766789999999999999998753
No 319
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.45 E-value=2.1e-10 Score=118.13 Aligned_cols=327 Identities=11% Similarity=0.052 Sum_probs=185.1
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceee-ecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~sea~~la~~a~~~~~~~~~ 145 (498)
+.+|.+.+++.+.+.+...... .....+...++.+.|++++..|.+. .....+ +++|+||+..|++.++..
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGseA~e~AlklAr~~----- 122 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHS-LDMATEAKREFLETFNEIILKPRGL--DYKVQFPGPTGTNAVESALKLARKV----- 122 (412)
T ss_pred CCCHHHHHHHHHHHhhccceec-cccCcHHHHHHHHHHHHhccCccCC--CceEEEeCCCchHHHHHHHHHHhhh-----
Confidence 4578899999888875322111 1112344446666677765323211 012445 589999999999998753
Q ss_pred HhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCccc---cCHHHHHHHhhh------CC
Q 010897 146 KEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV---MNPVKAVELVDE------NT 203 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~---~d~~~L~~~i~~------~t 203 (498)
.| +++|+. ....|....-+....|. .+..+|..+ ... -+++.+++.+++ ++
T Consensus 123 --tg----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~ 195 (412)
T TIGR02407 123 --TG----RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDG-YLGGDVDTIAYFEKLLEDSSSGVDLP 195 (412)
T ss_pred --cC----CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCC-ccccchhHHHHHHHHHHhccCCCCce
Confidence 12 345654 44566654444333221 223343321 011 246778888863 34
Q ss_pred eEEEEeeccCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCcc
Q 010897 204 ICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKY 278 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~ 278 (498)
.+|++--.....|.+ +-+++|.++|+++ |+++++|+++.|+-- ........ +++ ..|.++++ |+
T Consensus 196 aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~~~~~v-~PDi~~~~--K~ 264 (412)
T TIGR02407 196 AAVILETVQGEGGINVASDEWLQRLEKLCRRH------DILLIVDDIQAGCGR--TGTFFSFEPAGI-EPDIVCLS--KS 264 (412)
T ss_pred EEEEeccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhHHhcccCC-CCCEEEec--hh
Confidence 556654444455663 3478999999999 999999999986521 00000011 122 25666554 88
Q ss_pred CCC-CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHH
Q 010897 279 GLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGFEGYKNIMENCMGNARALRE 356 (498)
Q Consensus 279 l~~-p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~-lg~~g~~~~~~~~~~~a~~l~~ 356 (498)
+.+ +..+|+++.++. + ..+ ... ....+ ++-+.....+..+++.. +..+.+ .++..++.++|.+
T Consensus 265 lg~~G~pigav~~~~~--~-~~~--~~~-----~~~~T--~~gnpl~~aaa~a~l~~~i~~~~l---~~~~~~~g~~l~~ 329 (412)
T TIGR02407 265 ISGYGLPLALTLIKPE--L-DVW--KPG-----EHNGT--FRGNNLAFVTATAALEYYWSDDAF---EKAVQRKSEIIQE 329 (412)
T ss_pred ccCCccceeEEEEchh--h-hcc--CCC-----ccCCC--CCccHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHH
Confidence 776 777999998653 1 211 110 01111 22222344445666664 544434 3444555555555
Q ss_pred HHh----cCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHH
Q 010897 357 GLE----KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVER 432 (498)
Q Consensus 357 ~L~----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~ 432 (498)
.|+ +.+.+. ........++.+.+++ ......+.+.|.++|+++... ......+|++....+|.+++++
T Consensus 330 ~l~~l~~~~~~~~-~~vrg~Gl~~~l~l~~--~~~~~~~~~~~~~~Gv~v~~~-----~~~~~~lr~~p~l~~t~~~i~~ 401 (412)
T TIGR02407 330 RLDRIVAEYPELI-KQVRGRGLMQGIECGD--GDLAGKIAKAAFENGLIIETS-----GPNDEVIKLLPPLTIDEETLQQ 401 (412)
T ss_pred HHHHHHhhCCCce-EeeecceeEEEEEecC--hHHHHHHHHHHHHCCCEEecc-----CCCCCEEEEECCCCCCHHHHHH
Confidence 554 344322 1111123455667743 223468889999999887431 1224569999888899999999
Q ss_pred HHHHHHHHHH
Q 010897 433 LISHIEEVLK 442 (498)
Q Consensus 433 l~~~l~~~l~ 442 (498)
+++.|+++++
T Consensus 402 ~~~~l~~~l~ 411 (412)
T TIGR02407 402 GLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 320
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.44 E-value=7.5e-11 Score=122.30 Aligned_cols=355 Identities=12% Similarity=0.026 Sum_probs=192.9
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++..+... .....+...++.+.|++++..+. ....++++|+|
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGse 120 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-FQMGHPLAFELAERLAELAPGGL-----DHVFFTNSGSE 120 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 466654433321 123468888888888876322111 11122333456667777763221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcC------------CeeEEEEecCCc----cc--
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLEEGY----YV-- 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g------------~~~~~v~~~~~~----~~-- 189 (498)
|+..|++.++..+.. .|.+ ++.+||. ....|....-+....| .++..+|...+. +.
T Consensus 121 Ave~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK09221 121 SVDTALKIALAYHRA----RGQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKG 195 (445)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCC
Confidence 999999988764321 1211 1345654 4455554332222211 113334321100 00
Q ss_pred ------cCHHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 190 ------MNPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 190 ------~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
-..+++++.+. ++..+|++--.....|.+.| +++|.++|+++ |+++++|+++.|+-- .
T Consensus 196 ~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--t 267 (445)
T PRK09221 196 QPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH------GILLIFDEVITGFGR--L 267 (445)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCCc--C
Confidence 11356777775 23455665555555688888 99999999999 999999999976521 0
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.....+.......+|. +-+.....+..++|+
T Consensus 268 G~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~~T~--~~~pl~~aaa~a~L~ 340 (445)
T PRK09221 268 GAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE-IY-DAFMQGPEYAIEFFHGYTY--SAHPVACAAGLATLD 340 (445)
T ss_pred chhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH-HH-HhhccCcccccccccccCC--CcCHHHHHHHHHHHH
Confidence 000000 0122 1365544 3444322 33566665542 21 1111111111110111222 223345555567777
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc-EEEEEecCC---CCCCHHHHHHHHHhcCcEeeeecCCC
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LVAFSLKDS---SAHTVFEISEGLRKFGWIVPAYTMPA 409 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~---~~~~~~~l~~~L~~~G~~v~~~~~~~ 409 (498)
.+..++ ..++..++.++|.+.|+++.++..+.+-.+.+ +..+.+.+. .......+.+.|.++|+++..
T Consensus 341 ~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----- 412 (445)
T PRK09221 341 IYREED---LFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY----- 412 (445)
T ss_pred HHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEee-----
Confidence 765543 46778888889988888763332222211222 233444321 112245788999999988642
Q ss_pred CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 410 NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 410 ~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
....+|++....+|+++++++++.|++++.++
T Consensus 413 ---~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 413 ---TGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ---cCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 12469999777789999999999999998654
No 321
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.44 E-value=4.4e-10 Score=116.21 Aligned_cols=344 Identities=13% Similarity=0.049 Sum_probs=189.3
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceee-ecChh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~s 127 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+.+....... ........++.+.|++++..|.+. .....+ +++||
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGs 113 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILKPRGL--DYKVQFTGPTGT 113 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcCCcCC--CceEEEeCCCHH
Confidence 566655443332 2245788989998888753221111 112234445666677765333211 012455 47999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcC---------C---eeEEEEecCC-cc-ccCH
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE---------V---ELKEVKLEEG-YY-VMNP 192 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g---------~---~~~~v~~~~~-~~-~~d~ 192 (498)
||+..|++.++.. .| +.+|+. ....|....-+....| . .+..+|.... +. .-|+
T Consensus 114 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 114 NAVEAALKLARKV-------TG----RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred HHHHHHHHHHHHh-------cC----CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 9999999998653 12 345654 4455554333332221 1 2444544210 00 1367
Q ss_pred HHHHHHhhh------CCeEEEEeeccCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc
Q 010897 193 VKAVELVDE------NTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (498)
Q Consensus 193 ~~L~~~i~~------~t~~v~~~~~~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~ 262 (498)
+.|++.+++ ++.+|++--.....|.+ +.+++|.++|++| |+++++|+++.|+.. ........
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Gr--tG~~~~~~ 254 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH------DILLIVDDIQAGCGR--TGTFFSFE 254 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEechhhCCcc--ccHHHHHh
Confidence 788888853 23455544333334543 3689999999999 999999999987521 11000001
Q ss_pred -cCCCCeeEEEEcCCccCCC-CCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH-HHhcHHH
Q 010897 263 -FRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF-IRLGFEG 339 (498)
Q Consensus 263 -~~~~~~dsi~~s~hK~l~~-p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l-~~lg~~g 339 (498)
+++ ..|.++++ |.+.. +..+|+++.++. + ..+ .... ...+ ++-+.....++.+++ ..+..+
T Consensus 255 ~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i-~~~--~~~~-----~~~T--~~gnp~~~aaa~a~l~~~~~~~- 318 (425)
T PRK09264 255 RAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--L-DVW--KPGE-----HNGT--FRGNNLAFVTATAALEEYWSDD- 318 (425)
T ss_pred hcCC-CCCEEEec--cccCCCccceEEEEEchh--h-hcc--CCCc-----cCCC--CCCCHHHHHHHHHHHHHHHhhh-
Confidence 122 24666663 76654 566799987643 2 111 1101 1111 222223444555666 333332
Q ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCee
Q 010897 340 YKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVA 415 (498)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~ 415 (498)
+..++..++.++|.+.|++ .|.+ +........++.+.+.+ ......+.+.|.++|+.+... .....
T Consensus 319 --~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~--~~~~~~l~~~~~~~Gv~~~~~-----~~~~~ 388 (425)
T PRK09264 319 --AFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD--GELAGKIAAEAFENGLIIETS-----GPEDE 388 (425)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC--hHHHHHHHHHHHHCCCEEecc-----CCCCC
Confidence 3455666666777666654 3322 11111123445666643 223568889999999886431 11235
Q ss_pred EEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 416 VLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 416 ~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.||++....+|+++++++++.|+++++.+
T Consensus 389 ~lr~~p~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 389 VVKLLPPLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 68888777789999999999999998765
No 322
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.43 E-value=2.2e-10 Score=118.26 Aligned_cols=324 Identities=12% Similarity=0.049 Sum_probs=184.4
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++-....... ..+...++.+.|++++..+. ....++++||||+..|++.++.....
T Consensus 91 h~hp~v~~Av~~ql~~l~~~~~~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~t~~--- 160 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQPLHSQEL--LDPLRALLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 160 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCccccc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHhh---
Confidence 446888888888877643322111 13334456677777764321 24889999999999999988654211
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCccccCHHHHHHHhhh------CCeEEE
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE------NTICVA 207 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~d~~~L~~~i~~------~t~~v~ 207 (498)
.| +..|+. ....|....-+....+- .+..+|. -|.+.+++.++. +..+|+
T Consensus 161 -~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------~d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 161 -RG----KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------GDIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred -cC----CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC------CCHHHHHHHHHHHhcCCCcEEEEE
Confidence 12 345655 44566554433333221 1222322 256677776642 345555
Q ss_pred EeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccCCCC
Q 010897 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVY 282 (498)
Q Consensus 208 ~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p 282 (498)
+-.....-|.+.| +++|.++|+++ |+++++|+++.|+-- ...-..+ .+++ ..|.+++ -|-+..+
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~gv-~PDivt~--gK~lg~G 298 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEF------GALLILDEVQTGMGR--TGKMFACEHEGV-QPDILCL--AKALGGG 298 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeecccCCCc--cccchhhhhcCC-CCCeeee--hhhhcCC
Confidence 5444444577777 99999999999 999999999976521 1100000 1122 2566553 5655544
Q ss_pred -CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010897 283 -AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (498)
Q Consensus 283 -~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (498)
..+|.++.+++ .. +.+. ...+.. ..| ++-+.....+..++|+.+.+++ ..++..++.++|.+.|+++
T Consensus 299 ~~Pigavv~~~~-i~-~~~~-~~~~~~----~~T--~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 299 VMPIGATIATEA-VF-SVLF-DNPFLH----TTT--FGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred cccceEEEecHH-HH-Hhhh-ccCccc----cCC--CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHH
Confidence 45777776532 21 2211 001110 111 2222355566667777665554 3455666777777776654
Q ss_pred C-CeE-EeeC-CCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 362 G-RFE-ILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 362 ~-~~~-~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
. .+. .+.+ .....++.+.+..+ .....+.+.|.++|+++... . .+...+|+.....+|.+++|++++.++
T Consensus 367 ~~~~~~~i~~vRG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~-~----~~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 367 AAEYPDLIIEARGKGLLMAIEFRDN--EIGYAFAKELFQQNILVAGT-L----NNAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred HHhCCCceEEEecceEEEEEEeCCh--HHHHHHHHHHHHCCcEEeec-C----CCCCEEEEECCcccCHHHHHHHHHHHH
Confidence 2 111 1111 11345666666432 23467899999999887432 1 123579999888899999999998888
Q ss_pred HHH
Q 010897 439 EVL 441 (498)
Q Consensus 439 ~~l 441 (498)
+++
T Consensus 440 ~~~ 442 (442)
T TIGR03372 440 DAL 442 (442)
T ss_pred HhC
Confidence 753
No 323
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.43 E-value=4.1e-10 Score=116.69 Aligned_cols=355 Identities=13% Similarity=0.008 Sum_probs=192.4
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++-..... +....+.+.++.+.|++++.-.. ....++++|||
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGse 117 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA-FQMGHPKAFELANRIAEIAPGGL-----NHVFFTNSGSE 117 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc-CCcCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 566655444332 124468888888888876322111 11112334466677877763111 13899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcC------------CeeEEEEecCC--c--cc--
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLEEG--Y--YV-- 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g------------~~~~~v~~~~~--~--~~-- 189 (498)
|+..|++.++.... . .|.+ ++.+||. ....|....-+....| ..+..+|...+ . +.
T Consensus 118 A~e~AlklAr~~~~-~---~g~~-~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (442)
T PRK13360 118 SVDTALKIALAYHR-A---RGEG-SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192 (442)
T ss_pred HHHHHHHHHHHHHH-h---cCCC-CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCC
Confidence 99999998876321 1 1111 1345654 4445543322222211 12333443211 0 10
Q ss_pred ------cCHHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 190 ------MNPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 190 ------~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
-.++.|++++. ++..+|++--.....|.+.| +++|.++|+++ |+++++|+++.|+-. .
T Consensus 193 ~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~------g~llI~DEv~tG~Gr--t 264 (442)
T PRK13360 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH------GILLIFDEVITGFGR--L 264 (442)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--C
Confidence 02457777775 23445555444444577778 99999999999 999999999966521 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.............+|. +-+.....+..++|+
T Consensus 265 G~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~~~~~~~~~T~--~g~pl~~aaa~a~L~ 337 (442)
T PRK13360 265 GAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEAGIEFFHGYTY--SGHPLACAAALATLD 337 (442)
T ss_pred ccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCccccccccCCCC--CCCHHHHHHHHHHHH
Confidence 110000 1122 2465544 5655433 44677766542 21 1111111000000011222 223355666677777
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCcc-EEEEEecCC---CCCCHHHHHHHHHhcCcEeeeecCCC
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LVAFSLKDS---SAHTVFEISEGLRKFGWIVPAYTMPA 409 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~---~~~~~~~l~~~L~~~G~~v~~~~~~~ 409 (498)
.+..++ ..++..++.++|.+.|+++..+..+.+-.+.+ ++.+.+.+. ......++.++|.++|+.+...
T Consensus 338 ~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~---- 410 (442)
T PRK13360 338 LYEREG---LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT---- 410 (442)
T ss_pred HHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----
Confidence 776554 45667777788888887653332222111122 223333211 1112457888999999876421
Q ss_pred CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 410 NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 410 ~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...+|++....+|.+++|++++.|+++++++
T Consensus 411 ----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 411 ----GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 2469999877889999999999999998653
No 324
>PRK07678 aminotransferase; Validated
Probab=99.43 E-value=3.3e-10 Score=117.75 Aligned_cols=355 Identities=14% Similarity=0.032 Sum_probs=193.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.++. -.+.+|.+.+++.+.++.-......++ .+...++.+.|.++++.+ ....++++|||
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~--~~~~~~lae~l~~~~~~~------~~v~f~~sGse 116 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQS--HEPAIKLAEKLNEWLGGE------YVIFFSNSGSE 116 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccC--CHHHHHHHHHHHHhCCCC------CEEEEeCCcHH
Confidence 566654433322 223468888888888776432211112 233346667788876432 14899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCcccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVM----- 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~----- 190 (498)
|+..|++.++..+.. .|.+ ++.+|+. ....|....-+....|. .+..+|... .++.
T Consensus 117 A~e~AlklAr~~t~~----~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 190 (451)
T PRK07678 117 ANETAFKIARQYHAQ----KGEP-HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPD-CYRMPGIES 190 (451)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCc-cccccccCC
Confidence 999999998764321 1211 1345654 44455544433332221 133333221 1111
Q ss_pred ----CH---HHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccc-c-
Q 010897 191 ----NP---VKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P- 253 (498)
Q Consensus 191 ----d~---~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~-~- 253 (498)
|. +.+++.++ ++..+|++--.....|.+.| ++++.++|++| |+++++|+++.||-- .
T Consensus 191 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~ 264 (451)
T PRK07678 191 EDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH------GALLISDEVICGFGRTGK 264 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhcCCcCch
Confidence 12 23566664 23455555433333466654 88999999999 999999999977621 1
Q ss_pred ccCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
++.- . .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.....+ +......| ++-++....+..++|
T Consensus 265 ~~~~--~-~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~-i~-~~~~~~~~~-~~~~h~~T--~~gnp~~~aaa~a~l 333 (451)
T PRK07678 265 AFGF--M-NYGV-KPDIITM--AKGITSAYLPLSATAVKKE-IY-EAFKGKGEY-EHFRHVNT--FGGNPAACALALKNL 333 (451)
T ss_pred hHHH--H-hcCC-CCCEEEe--ecccccCCcceeEEEEcHH-HH-HHHhccCcc-cccccCCC--CCcCHHHHHHHHHHH
Confidence 1100 1 1222 2677766 4554444 46888887653 21 211111000 00001112 233335666667777
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEeeCCCCccEEEEEecCCC----CCC---HHHHHHHHHhcCcE
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLE----KTGRFEILSKDVGVPLVAFSLKDSS----AHT---VFEISEGLRKFGWI 401 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~~v~f~~~~~~----~~~---~~~l~~~L~~~G~~ 401 (498)
+.+.+++ ..++..++.++|.+.|+ +.+.+.-+.. ...++.+.+..+. ..+ ...+...|.++|++
T Consensus 334 ~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg--~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~ 408 (451)
T PRK07678 334 EIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGDIRG--KGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLI 408 (451)
T ss_pred HHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEe--eceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcE
Confidence 7775554 34555556666666554 3342111111 2344555553211 011 35788889999988
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+.. ..+....+...+|++....+|.++++++++.++++++.+
T Consensus 409 ~~~-~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 409 IGK-NGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred Eee-cCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 742 112111234679998777779999999999999998765
No 325
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=9.3e-10 Score=113.56 Aligned_cols=347 Identities=12% Similarity=0.039 Sum_probs=187.7
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.++. -.+.+|.+.+++.+.+++...... .....+...++.+.|++++.-+. .....++++|||
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~SGse 112 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDF----AKKTIFVTTGAE 112 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHH
Confidence 466554434432 224578888999888876432111 11122333456666777764211 024899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCccccC---
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMN--- 191 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~~d--- 191 (498)
|+..|++.++.. .| +++|+. ....|....-+....|. ++..+|...+...++
T Consensus 113 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 181 (425)
T PRK07495 113 AVENAVKIARAA-------TG----RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQ 181 (425)
T ss_pred HHHHHHHHHHHh-------hC----CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHH
Confidence 999999988653 12 345654 44555543322222121 234455432111122
Q ss_pred -HHHHHHHhh-----hCCeEEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc
Q 010897 192 -PVKAVELVD-----ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (498)
Q Consensus 192 -~~~L~~~i~-----~~t~~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~ 261 (498)
++.+++.+. ++..+|++.-....+|.+. -+++|.++|++| |+++++|+++.|+.. ...-...
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr--~G~~~a~ 253 (425)
T PRK07495 182 SLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH------GILLIADEVQTGFAR--TGKLFAM 253 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--CCCceee
Confidence 345576664 2344555443333345443 378999999999 999999999987531 1110001
Q ss_pred c-cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHH
Q 010897 262 D-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY 340 (498)
Q Consensus 262 ~-~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~ 340 (498)
+ +++ ..|.+++ -|.+.++..+|+++.+.+ .. +.+. .. ....+ ++-+.....+..++++.+..+.
T Consensus 254 ~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~-i~-~~~~--~~-----~~~~T--~~~~pl~~aaa~a~l~~l~~~~- 318 (425)
T PRK07495 254 EHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE-IM-DAPG--PG-----GLGGT--YGGNPLGIAAAHAVLDVIEEED- 318 (425)
T ss_pred cccCC-CCCEEee--hhhhcCCccceEEEEcHH-HH-hccC--CC-----CcCCC--CCCCHHHHHHHHHHHHHHHhch-
Confidence 1 111 2454443 576666677898887542 21 1111 10 01112 2222244455556666665443
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCCC--CC---HHHHHHHHHhcCcEeeeecCCCCCCC
Q 010897 341 KNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSA--HT---VFEISEGLRKFGWIVPAYTMPANAEN 413 (498)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~--~~---~~~l~~~L~~~G~~v~~~~~~~~~~~ 413 (498)
..++..++.++|.+.|+++- .+..+..-. ..-++.+.+.+.+. -+ ...+.+.+.++|+++... ..+
T Consensus 319 --l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----g~~ 391 (425)
T PRK07495 319 --LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC-----GVH 391 (425)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec-----CCC
Confidence 44555556666666665431 011111111 22344455533211 11 346788889999886321 112
Q ss_pred eeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 414 VAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 414 ~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
.+++|+.--..+|.+++|++++.|+++++++.
T Consensus 392 ~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 392 GNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 36789986667899999999999999998764
No 326
>PRK06105 aminotransferase; Provisional
Probab=99.42 E-value=1.7e-10 Score=120.08 Aligned_cols=357 Identities=12% Similarity=0.043 Sum_probs=193.5
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++..+....+....+.+.++.+.|++++..+. ....++++|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 120 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-----SKVFFTNSGSE 120 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 455554444332 224468889999888876432111111223444466677888764322 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCcccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVM----- 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~----- 190 (498)
|+..|++.++..+. .+ |.. ++.+|+. ....|....-+..+.+. .+..+|... .+..
T Consensus 121 Ave~AlKlar~~~~-~~---g~t-~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 194 (460)
T PRK06105 121 ANDTVVKLVWYYNN-AL---GRP-EKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH-YYRFGLPGE 194 (460)
T ss_pred HHHHHHHHHHHHHH-hc---CCC-CCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc-ccccccCCC
Confidence 99999998864321 11 211 2345554 45566654333222221 122232211 0111
Q ss_pred --------CHHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 191 --------NPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 191 --------d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
..+++++++. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.|+-.
T Consensus 195 ~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~------~~llI~DEv~tG~GR-- 266 (460)
T PRK06105 195 SEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY------DILLVADEVICGFGR-- 266 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCeEEEeccccCCCc--
Confidence 1356777773 23445554433444466666 89999999999 999999999976521
Q ss_pred cCCCCccc-cCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-.... +++ ..|.+++ -|.+.++ ..+|.++.++. . .+.+.......+......| ++-++....+..++|
T Consensus 267 tG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~-i-~~~~~~~~~~~~~~~h~~T--~~gnpl~~aaa~a~L 339 (460)
T PRK06105 267 TGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK-V-YDPIADESGKIGTFGHGFT--ASGHPVAAAVALENL 339 (460)
T ss_pred CchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH-H-HHHHhcccccCcccccCCC--CCCCHHHHHHHHHHH
Confidence 11100001 122 2565544 4555443 35677776542 1 1111111000010001112 222234555566677
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC-ccEEEEEecCCC----CCC-----HHHHHHHHHhcCcEe
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG-VPLVAFSLKDSS----AHT-----VFEISEGLRKFGWIV 402 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G~~v 402 (498)
+.+.++ +..++..++.++|.+.|+++....++..-.+ .-+..+.+..+. ..+ ...+...+.++|+++
T Consensus 340 ~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~ 416 (460)
T PRK06105 340 AIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVIS 416 (460)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEE
Confidence 666554 4567777788888888776532222222112 234445553211 111 246888889999886
Q ss_pred eeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 403 PAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 403 ~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
... ..++|++....+|.+++|++++.++++++++..
T Consensus 417 ~~~--------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 417 RAM--------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred Eec--------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 421 146898865567999999999999999987643
No 327
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.42 E-value=6.2e-10 Score=114.90 Aligned_cols=330 Identities=12% Similarity=0.025 Sum_probs=186.4
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++..... ......+.+.++.+.|++++..+. .....++++||||+..|++.++..
T Consensus 56 h~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~----~~~~~f~~sGseA~e~AlklAr~~------ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFTHTA-YQIVPYESYVTLAEKINALAPVSG----QAKTAFFTTGAEAVENAVKIARAH------ 124 (421)
T ss_pred CCCHHHHHHHHHHHHhccCcc-cCccCCHHHHHHHHHHHHhCCCCC----CceEEEeCChHHHHHHHHHHHHHh------
Confidence 446888888888887633211 111122333466666777664221 124889999999999999988642
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCcccc----CHHHHHHHhh-----hCC
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVM----NPVKAVELVD-----ENT 203 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~~----d~~~L~~~i~-----~~t 203 (498)
.| +++|+. ....|....-+....|. .+..+|...+...+ +++.+++.+. ++.
T Consensus 125 -tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK09792 125 -TG----RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQV 199 (421)
T ss_pred -cC----CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCce
Confidence 12 356654 44456543333333221 13334432211112 3477888876 235
Q ss_pred eEEEEeeccCCccccc-C---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCcc
Q 010897 204 ICVAAILGSTLTGEFE-D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~-~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~ 278 (498)
.+|++.-..+++|... | +++|.++|+++ ++++++|+++.|+.- ....... .++ ...|.+ +.-|.
T Consensus 200 aavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~-~~pDi~--t~gK~ 268 (421)
T PRK09792 200 AAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH------GIVMIADEVQSGFAR--TGKLFAMDHYA-DKPDLM--TMAKS 268 (421)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CCchhHHHhcC-CCCcEE--Eeehh
Confidence 6676666666677654 5 89999999999 999999999988631 1111110 111 124543 44677
Q ss_pred CCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010897 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 279 l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 358 (498)
+.++..+|+++.+.+ .. +.+. ......| ++-+.....+..+.++.+..+ +..++..++.+++.+.|
T Consensus 269 l~~G~pigav~~~~~-i~-~~~~-------~~~~~~T--~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l 334 (421)
T PRK09792 269 LAGGMPLSGVVGNAN-IM-DAPA-------PGGLGGT--YAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTL 334 (421)
T ss_pred hcCCCceEEEEEcHH-HH-hccC-------CCCcCCC--CCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHH
Confidence 777788999886542 11 1111 0001112 222223444444566666444 34455556666666665
Q ss_pred hcCC-CeEEeeCCCC-ccEEEEEecCCCC-----CCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHH
Q 010897 359 EKTG-RFEILSKDVG-VPLVAFSLKDSSA-----HTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVE 431 (498)
Q Consensus 359 ~~~~-~~~~~~~~~~-~~~v~f~~~~~~~-----~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~ 431 (498)
+++- .+..+....+ ..++.+.+.+... .....+.+.+.++|+++.. . ....+++|+.....++.++++
T Consensus 335 ~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~----~-g~~~~~irl~P~l~i~~~ei~ 409 (421)
T PRK09792 335 IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLT----C-GAYGNVIRFLYPLTIPDAQFD 409 (421)
T ss_pred HHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEee----c-CCCCCEEEEeCCCcCCHHHHH
Confidence 5431 0111222223 3455566643211 2346788899999988731 1 122467999876668999999
Q ss_pred HHHHHHHHHHH
Q 010897 432 RLISHIEEVLK 442 (498)
Q Consensus 432 ~l~~~l~~~l~ 442 (498)
++++.|.+++.
T Consensus 410 ~~~~~l~~~l~ 420 (421)
T PRK09792 410 AAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHh
Confidence 99998888763
No 328
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.42 E-value=1.8e-10 Score=119.10 Aligned_cols=343 Identities=13% Similarity=0.001 Sum_probs=182.2
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCC-CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+||..+.+.++. -.+.+|.+.+++.+.+++.... +...+ .+.+.++.+.|++++..+. .....++++||
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~----~~~v~f~~sGs 104 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTP--YEGYVALAEKLNRIAPGSG----PKKSVFFNSGA 104 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccC--ChHHHHHHHHHHHhCCCCC----CCEEEEeCCcH
Confidence 466544333322 1234688989998888764321 11111 2223355666777663211 12489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcC--------C-----eeEEEEecCC-------
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFE--------V-----ELKEVKLEEG------- 186 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g--------~-----~~~~v~~~~~------- 186 (498)
||+..|++.++.. .| +++|+ .....|....-+....+ . ++..+|....
T Consensus 105 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
T TIGR00700 105 EAVENAVKIARSY-------TG----RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLD 173 (420)
T ss_pred HHHHHHHHHHHHh-------cC----CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccc
Confidence 9999999988653 12 34455 45556664444333322 1 1233333110
Q ss_pred ---ccccCHHHHHHHhh-----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 187 ---YYVMNPVKAVELVD-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 187 ---~~~~d~~~L~~~i~-----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
.+.-+++.+++.+. ++..+|++--....+|.+.| +++|.++|++| |+++++|++|.++.-
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tg~gr-- 245 (420)
T TIGR00700 174 KQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH------GIVFIADEVQTGFAR-- 245 (420)
T ss_pred cchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--
Confidence 01112556776663 23455665544445676655 89999999999 999999999988631
Q ss_pred cCCCCccc-cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEWD-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~~-~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
...-.... +++ ..|.++ ..|.+.++..+|+++.+.. .. +.+. .. ....++ +-+.....+..++++
T Consensus 246 ~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~-i~-~~~~--~~-----~~~~T~--~~~pl~~aaa~a~l~ 311 (420)
T TIGR00700 246 TGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE-IM-DAPA--PG-----GLGGTY--AGNPLACAAALAVLA 311 (420)
T ss_pred cchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH-HH-hhcC--CC-----CcCCCC--CcCHHHHHHHHHHHH
Confidence 11100001 111 245444 4677767788999987542 21 1111 00 011111 222234444445566
Q ss_pred HhcHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCC-C----CCHHHHHHHHHhcCcEeeeecC
Q 010897 334 RLGFEGYKNIMENCMG-NARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS-A----HTVFEISEGLRKFGWIVPAYTM 407 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~-~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~-~----~~~~~l~~~L~~~G~~v~~~~~ 407 (498)
.+..+.+.+..++..+ +.+.|.+...+.|.+.-+.. ...++.+.+.+.. . .....+.+.+.++|+.+...
T Consensus 312 ~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~-- 387 (420)
T TIGR00700 312 IIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRG--LGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTC-- 387 (420)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec--cceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEecc--
Confidence 6555555444444332 33333333334443322222 2344555552211 1 11356777778999876321
Q ss_pred CCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 408 PANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 408 ~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
... ..++|++.....+.+++++.++.|++++
T Consensus 388 --~~f-~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 388 --GMF-GNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred --CCC-CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 111 2579999755568899998888888776
No 329
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.41 E-value=2.6e-10 Score=113.43 Aligned_cols=323 Identities=13% Similarity=0.058 Sum_probs=194.6
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
..+|.+.+++.+.+.+... +...+++|-++.+.+.+++..- ...-++++||||+|.|++.+|--.
T Consensus 69 H~~p~V~~Av~~~l~~G~~----fg~Pte~Ei~~Aell~~~~p~~------e~vrfvnSGTEAtmsAiRlARa~T----- 133 (432)
T COG0001 69 HAHPAVVEAVQEQLERGLS----FGAPTELEVELAELLIERVPSI------EKVRFVNSGTEATMSAIRLARAYT----- 133 (432)
T ss_pred CCCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHHhcCcc------cEEEEecchhHHHHHHHHHHHHhh-----
Confidence 3468899999999887643 3445678888889999988762 139999999999999999987541
Q ss_pred hcCCCCCCcEEE-EcCCchhHHHHHHHHcCCe-------------------eEEEEecCCccccCHHHHHHHhhhC---C
Q 010897 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEVE-------------------LKEVKLEEGYYVMNPVKAVELVDEN---T 203 (498)
Q Consensus 147 ~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~-------------------~~~v~~~~~~~~~d~~~L~~~i~~~---t 203 (498)
++++|+ +...+|...+...-..|-. +..+| | .|++.+++++... .
T Consensus 134 ------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~-----y-ND~~al~~~~~~~g~~I 201 (432)
T COG0001 134 ------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP-----Y-NDLEALEEAFEEYGDDI 201 (432)
T ss_pred ------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec-----C-CCHHHHHHHHHHcCCcE
Confidence 245665 4556666555444333311 11121 2 5899999999864 3
Q ss_pred eEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccC
Q 010897 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (498)
Q Consensus 204 ~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l 279 (498)
.+|++--.-...|.+.| ++.|.+||+++ |++++.|++..||-.++..- ...+++. .|.. ..-|.+
T Consensus 202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~------G~lLI~DEViTGFR~~~gGa--q~~~gi~-PDlt--tlGKiI 270 (432)
T COG0001 202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH------GALLIFDEVITGFRVALGGA--QGYYGVE-PDLT--TLGKII 270 (432)
T ss_pred EEEEeccccCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchhhcccCCccc--ccccCcC-cchh--hhhhhh
Confidence 45555544555677755 56799999999 99999999998875432111 1111221 3433 346888
Q ss_pred CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH-HH-HHHHHHHHHHHHHHHHHH
Q 010897 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EG-YKNIMENCMGNARALREG 357 (498)
Q Consensus 280 ~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~-~g-~~~~~~~~~~~a~~l~~~ 357 (498)
+++..+|.+--|. +.....-+...-|..+ | ++-++..+.+-.+.++.+-. ++ |+...+...++++-|.+.
T Consensus 271 GGGlP~ga~gGr~-eiM~~~~p~g~vyqaG-----T--~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~ 342 (432)
T COG0001 271 GGGLPIGAFGGRA-EIMEQLAPLGPVYQAG-----T--LSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAA 342 (432)
T ss_pred cCCcceeeeccHH-HHHhhhCCCCCccccC-----C--CCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 8888888776443 2221111111222222 1 33344667777777777765 33 555545444555555555
Q ss_pred HhcCCCeEEeeCCCCccEEEEEecCC--CC------CC---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCC
Q 010897 358 LEKTGRFEILSKDVGVPLVAFSLKDS--SA------HT---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFS 426 (498)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~--~~------~~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t 426 (498)
+.+.+ +.+.... ....+.+.+.+. .. .+ ..++.+.|.++|+.++.. . .. ...++..+|
T Consensus 343 ~~~~g-~~~~v~~-~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps----~-~e----a~flS~aht 411 (432)
T COG0001 343 AERHG-IPLTVNR-VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPS----Q-FE----AGFLSTAHT 411 (432)
T ss_pred HHHhC-CCeEEee-ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCc----c-cc----ceeeecccC
Confidence 55554 4333222 123344433221 10 01 245667889999875321 1 01 122335569
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 010897 427 RSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 427 ~~~~~~l~~~l~~~l~~l~~ 446 (498)
.+++|+++++++++++.+.+
T Consensus 412 e~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 412 EEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999887653
No 330
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=4.7e-10 Score=116.59 Aligned_cols=329 Identities=12% Similarity=-0.001 Sum_probs=182.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++... +.......+...++.+.|++++..... ....++++|+||+..|++.++..
T Consensus 72 h~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~----~~v~f~~sGseA~e~AlklAr~~------ 140 (443)
T PRK06058 72 NSAPRVVEAVREQVARFTH-TCFMVTPYEGYVAVAEQLNRLTPGDHE----KRSALFNSGAEAVENAVKIARSY------ 140 (443)
T ss_pred CCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHh------
Confidence 4468899999888876321 111111234444677778887643210 14788999999999999988643
Q ss_pred hcCCCCCCcEEEEcC-CchhHHHHHHHHcCC-------------eeEEEEecCCccc------c--------CHHHHHHH
Q 010897 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEEGYYV------M--------NPVKAVEL 198 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~------~--------d~~~L~~~ 198 (498)
.| +++|+.-. ..|....-+....+. .+..+|.... ++ . ..+.+++.
T Consensus 141 -tg----r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (443)
T PRK06058 141 -TG----RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP-YRDPKGLATDGEEAAARAITVIEKQ 214 (443)
T ss_pred -hC----CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc-cccccccccchHHHHHHHHHHHHHh
Confidence 12 34566544 455554444333221 1233332110 11 1 12233444
Q ss_pred hh-hCCeEEEEeeccCCc-ccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEE
Q 010897 199 VD-ENTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (498)
Q Consensus 199 i~-~~t~~v~~~~~~t~t-G~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi 271 (498)
+. +++.+|+ .-|-... |.+.| +++|.++|++| |+++++|+++.||.. ....... .+++ ..|.+
T Consensus 215 ~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfgR--tG~~fa~~~~gv-~PDiv 284 (443)
T PRK06058 215 VGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCREN------GVVFIADEVQTGFAR--TGAWFACEHEGI-VPDLI 284 (443)
T ss_pred hCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ChhhhHHHhcCC-CCCEE
Confidence 43 3344444 5555555 44433 89999999999 999999999987631 1110000 1122 24777
Q ss_pred EEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (498)
Q Consensus 272 ~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a 351 (498)
+++ |.+.++..+|+++.+++ .. +.+. .. ....| ++-+.....+..++|+.+.++ +..++..++.
T Consensus 285 ~~g--K~l~~G~Pi~av~~~~~-i~-~~~~--~~-----~~~~T--~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g 348 (443)
T PRK06058 285 TTA--KGIAGGLPLSAVTGRAE-IM-DAPH--PG-----GLGGT--YGGNPVACAAALAAIETIEED---DLVARARQIE 348 (443)
T ss_pred EEc--ccccCCCccEEEEEcHH-HH-hhcc--CC-----CCCCC--CCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHH
Confidence 664 77666677888887642 21 1111 00 01112 222234455555666555444 4556666677
Q ss_pred HHHHHHHhcCC-CeEEeeCC-CCccEEEEEecCC-CCC-C---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCC
Q 010897 352 RALREGLEKTG-RFEILSKD-VGVPLVAFSLKDS-SAH-T---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRED 424 (498)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~~-~~~~~v~f~~~~~-~~~-~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~ 424 (498)
++|.+.|+++. ...++..- ....++.+.+.++ ... + ...+.+.+.++|+++.... ....++|+.....
T Consensus 349 ~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-----~~~~~lr~~Ppl~ 423 (443)
T PRK06058 349 ALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-----TYGNVIRLLPPLV 423 (443)
T ss_pred HHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-----CCCCEEEEECCCc
Confidence 77777776642 12222111 1234555555321 111 1 3467778889998864211 1125799987777
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 010897 425 FSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 425 ~t~~~~~~l~~~l~~~l~~ 443 (498)
+|.++++++++.|++++++
T Consensus 424 ~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 424 IGDELLREGLDVLEAALAD 442 (443)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 8999999999999998864
No 331
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=3.8e-10 Score=117.16 Aligned_cols=345 Identities=13% Similarity=0.094 Sum_probs=192.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.. -.+.+|.+.+++.+.+++.......+ ...+.+.++.+.|++++.-.. .....++++|+|
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~----~~~v~f~~SGse 114 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAY-MYHEPLVRLAKKLCELAPGDF----EKRVTFGLSGSD 114 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccc-cCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHH
Confidence 566654433321 22346889999988887643221111 123444466677888763221 024899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV----- 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~----- 189 (498)
|+..|++.++.. .| +.+|+. ....|....-+....+. ++..+|..+. ++
T Consensus 115 A~e~AiklAr~~-------tg----r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~ 182 (445)
T PRK08593 115 ANDGIIKFARAY-------TG----RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDK-YRGMYEE 182 (445)
T ss_pred HHHHHHHHHHHh-------hC----CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcc-ccccccC
Confidence 999999988653 12 345554 44566655444433331 1334443211 11
Q ss_pred cC-------HHHHHHHhh-----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 190 MN-------PVKAVELVD-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 190 ~d-------~~~L~~~i~-----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
.+ ++.+++.+. +++.+|++--.....|.+.| +++|.++|++| |+++++|+++.|+.-
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tg~Gr- 255 (445)
T PRK08593 183 PDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH------GILFAVDDIQQGLGR- 255 (445)
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc-
Confidence 11 234554443 34556665555555577766 99999999999 999999999976521
Q ss_pred ccCCCCc-cccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~-~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-.. ..+++ ..|.+++ -|.+.++..+|+++.+++ .. +.+. .....+| ++-+.....+..++|
T Consensus 256 -tG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i~-~~~~-------~~~~~~T--~~~~pl~~aaa~a~l 320 (445)
T PRK08593 256 -TGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-IM-ESLE-------APAHLFT--TGANPVSCAAALATI 320 (445)
T ss_pred -CchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-HH-hhhc-------cCCCCCC--CCCCHHHHHHHHHHH
Confidence 110000 01222 2465543 566555566788876542 21 1111 1111122 222234455566666
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCCc-cEEEEEecCCC------CCCHHHHHHHHHhcCcEeee
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGV-PLVAFSLKDSS------AHTVFEISEGLRKFGWIVPA 404 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~-~~v~f~~~~~~------~~~~~~l~~~L~~~G~~v~~ 404 (498)
+.+.++ +..++..++.++|.+.|+++- .+.++..-.+. .++.+.+..+. ......+...|.++|+++..
T Consensus 321 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~ 397 (445)
T PRK08593 321 DMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIA 397 (445)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEec
Confidence 666544 345666666677777666531 11122211122 23334442111 01135788899999987632
Q ss_pred ecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 405 YTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 405 ~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
. +..++|++....+|.++++++++.++++++.+..
T Consensus 398 ~-------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 398 V-------AGNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred c-------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 1 1256999998889999999999999999987644
No 332
>PRK06541 hypothetical protein; Provisional
Probab=99.41 E-value=7.3e-10 Score=115.37 Aligned_cols=355 Identities=14% Similarity=0.036 Sum_probs=196.1
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASF----VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~----~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+. .-.+.+|.+.+++.+.+++..+... +....+...++.+.|++++..+. ....++++|||
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGse 123 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL-WSYAHPPAIELAERLAALAPGDL-----NRVFFTTGGSE 123 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEcCCcHH
Confidence 46655443332 1223468898989888876432111 11122333456666777653221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCC-c---cccC
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEG-Y---YVMN 191 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~-~---~~~d 191 (498)
|+..|++.++..+.. .|.+ ++.+|+. ....|....-+....|. ++..+|...- . +.-|
T Consensus 124 Ave~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 198 (460)
T PRK06541 124 AVESAWKLAKQYFKL----TGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDD 198 (460)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCC
Confidence 999999988754321 1211 1345554 44556544433332221 1333432210 0 1112
Q ss_pred --------HHHHHHHhhh---CCeEEEEeec-cCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 192 --------PVKAVELVDE---NTICVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 192 --------~~~L~~~i~~---~t~~v~~~~~-~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
++.+++.+.. +..+.+++-| ....|.+.| +++|.++|+++ |+++++|+++.||-. .
T Consensus 199 ~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tGfGR--~ 270 (460)
T PRK06541 199 PEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY------DVLLVSDEVICAFGR--L 270 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--C
Confidence 3667777752 3344444444 666788888 99999999999 999999999966521 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCCC-CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p~-g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
...... .+++ ..|.++ .-|.+.+++ .+|+++.+++ .. +.+.... .......| ++-+...+.+..+.++
T Consensus 271 G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~-i~-~~~~~~~---~~~~~~~T--~~gnp~~~aaala~l~ 340 (460)
T PRK06541 271 GEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDR-LF-EPFLDGP---TMFLHGYT--FGGHPVSAAVALANLD 340 (460)
T ss_pred chhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHH-HH-HHhhcCC---CccccCCC--CCCCHHHHHHHHHHHH
Confidence 111000 1122 256655 356555544 6888887643 11 1111100 00000111 2222345555556666
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CCccEEEEEecCCC----CCC--------HHHHHHHHHhcCc
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSS----AHT--------VFEISEGLRKFGW 400 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~----~~~--------~~~l~~~L~~~G~ 400 (498)
.+..++ ..++..++.++|.+.|+++....++..- ....++.+.+..+. ..+ ...+.+.|.++|+
T Consensus 341 ~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 417 (460)
T PRK06541 341 IFEREG---LLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGL 417 (460)
T ss_pred HHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCe
Confidence 665543 4577778888888888776322221110 12345555553211 010 0257788999998
Q ss_pred EeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 401 IVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 401 ~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++... ..+..++|++....+|++++|++++.|+++++.+
T Consensus 418 ~~~~~-----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 418 YCRAD-----DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred EEEec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 86431 1234679999777789999999999999999764
No 333
>PRK05965 hypothetical protein; Provisional
Probab=99.40 E-value=5.8e-10 Score=116.15 Aligned_cols=358 Identities=12% Similarity=0.025 Sum_probs=195.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.. -.+.+|++.+++.+.+++..+....+....+...++.+.|++++..+. ....++++|||
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGSE 118 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-----NHVYFTLGGSD 118 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCChhH
Confidence 566655444432 123468899999988876432221111123333466667777763211 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcCC------------eeEEEEecCC-c--cccC-
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YVMN- 191 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~-~--~~~d- 191 (498)
|+..|++.++..+.. .|.+ ++.+|| .....|....-+....+. .+..++.... . +.-|
T Consensus 119 Ave~AlKlAr~~~~~----~g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 119 AVDSAVRFIRHYWNA----TGRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 999999998764321 1211 134555 455566644333232221 1233332210 0 1123
Q ss_pred -------HHHHHHHhhh----CCeEEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccC
Q 010897 192 -------PVKAVELVDE----NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (498)
Q Consensus 192 -------~~~L~~~i~~----~t~~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~ 256 (498)
++.+++.+.. +..+|++--.....|.+. =+++|.++|++| |+++++|+++.||-- ..
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfGR--tG 265 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL------GILFVADEVITGFGR--TG 265 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhccCcc--Cc
Confidence 2567777752 344555543333335542 267899999999 999999999988621 11
Q ss_pred CCCccc-cCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH
Q 010897 257 PDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 257 ~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~ 334 (498)
.-..+. +++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.......+......| ++-+.....+..+.|+.
T Consensus 266 ~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~Aaa~a~L~~ 338 (459)
T PRK05965 266 PLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDH-VY-QGIADGAGAAAPVGHGYT--YSAHPVSAAVGLEVLRL 338 (459)
T ss_pred hhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHH-HH-HHHhccccccccccccCC--CCCCHHHHHHHHHHHHH
Confidence 100011 122 2577665 4655555 36888887643 11 111100000000001112 22223455666667776
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCcEeee
Q 010897 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSS----AHT-----VFEISEGLRKFGWIVPA 404 (498)
Q Consensus 335 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G~~v~~ 404 (498)
+.+++ ..++..++.++|.+.|+++....++..-. ...++.+.+..+. ..+ ...+.+.+.++|+++..
T Consensus 339 l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~ 415 (459)
T PRK05965 339 YHEGG---LLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA 415 (459)
T ss_pred HHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe
Confidence 65553 45667777888888877653222222211 2234455553211 111 34677888999988742
Q ss_pred ecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 405 YTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 405 ~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
.+..++|+..-..+|+++++++++.++++++++.
T Consensus 416 -------~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 416 -------FGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred -------cCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 1345688886666799999999999999998773
No 334
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=4e-10 Score=108.57 Aligned_cols=316 Identities=13% Similarity=0.059 Sum_probs=191.5
Q ss_pred CCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCc
Q 010897 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (498)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~ 163 (498)
...|..+.+..-+++.+.+.+.+.-|.|.+. ..++.|.|+|.|+...+..+... .++-|++|-+-
T Consensus 106 ~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p---~dI~LT~GAS~ai~~il~l~~~~------------~~~GvliPiPQ 170 (475)
T KOG0258|consen 106 LGAYSDSQGVPGVRKHVAEFIERRDGIPADP---EDIFLTTGASPAIRSILSLLIAG------------KKTGVLIPIPQ 170 (475)
T ss_pred ccccccccCChhHHHHHHHHHHhccCCCCCH---HHeeecCCCcHHHHHHHHHHhcC------------CCCceEeecCC
Confidence 3456777888899999999999998976543 34999999999998777665432 24679999999
Q ss_pred hhHHHHHHHHcCCeeEEEEec-CCccccCHHHHHHHhhh-----CCeEEEEeeccCCcccc---cCHHHHHHHHHHhhcc
Q 010897 164 QVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEE 234 (498)
Q Consensus 164 h~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~ 234 (498)
|+-|...+..+|...+...++ +.+|.+|.++|++.+++ +++++++++|.||||.+ +.+++|..+|.++
T Consensus 171 YPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~--- 247 (475)
T KOG0258|consen 171 YPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE--- 247 (475)
T ss_pred CchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc---
Confidence 999999999999998888887 35699999999998876 58899999999999998 5788899999999
Q ss_pred cCCCceEEEecCcccccccccCCC-Ccccc-------C--CC-CeeEEEE-cCCc--cCCCCCCeEEEEEeCCC--CCCc
Q 010897 235 TGWDTPIHVDAASGGFIAPFLYPD-LEWDF-------R--LP-LVKSINV-SGHK--YGLVYAGVGWVVWRTKD--DLPD 298 (498)
Q Consensus 235 ~~~~~~l~vD~A~~g~~~~~~~~~-~~~~~-------~--~~-~~dsi~~-s~hK--~l~~p~g~g~~~~~~~~--~l~~ 298 (498)
++.++.|++|-.-+ +.+. ..+.| + .+ .+-.+++ +.|| ++-++.+.|+.=+-+.. ....
T Consensus 248 ---~l~llaDEVYQ~Nv---y~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~q 321 (475)
T KOG0258|consen 248 ---GLVLLADEVYQDNV---YTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQ 321 (475)
T ss_pred ---CeEEechHHHHhhc---cCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHH
Confidence 99999999986543 2221 11111 1 11 2333333 2333 22233334544322111 0000
Q ss_pred cc-----ccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCc
Q 010897 299 EL-----VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGV 373 (498)
Q Consensus 299 ~~-----~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 373 (498)
.+ ...+...+......-.+--.++-....++.+ .-..+.+.+...++.+.+.++.++++..... +.
T Consensus 322 i~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-------Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~--qG 392 (475)
T KOG0258|consen 322 IKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-------EKDGILSSLRSRAKLTEDAFNSLEGISCNPV--QG 392 (475)
T ss_pred HHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-------hhHhHHHHHHHHhHHHHHHHhhcCceeeccC--cc
Confidence 00 0001111110000000011111112222211 1234566777788889999999998876543 45
Q ss_pred cEEEE-Ee--cCC-------CCC--CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHH
Q 010897 374 PLVAF-SL--KDS-------SAH--TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERL 433 (498)
Q Consensus 374 ~~v~f-~~--~~~-------~~~--~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l 433 (498)
.+..| ++ +.. .++ |.+--.+-|...||.+.....-....+...+|.++-+... +.+++|
T Consensus 393 AMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~~-~~i~~~ 463 (475)
T KOG0258|consen 393 AMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPGL-EIIEKF 463 (475)
T ss_pred ceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCchh-HHHHHH
Confidence 55565 32 211 112 2222224456678765433322334667889999876543 444443
No 335
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.39 E-value=1.3e-10 Score=119.27 Aligned_cols=266 Identities=13% Similarity=0.075 Sum_probs=180.1
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCee
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~ 178 (498)
+..+..|+.||.+. .-.+++|.|.||...+.+...+ ++.|+++.+.|-|.....-+.|+.+
T Consensus 74 eAqe~aA~~fgAd~------tyFvvNGTS~ank~vi~a~~~~-------------GD~VLvdRN~HKSi~~glilaGa~P 134 (557)
T COG1982 74 EAQELAARVFGADH------TYFVVNGTSTANKAVINAVLTP-------------GDKVLVDRNCHKSIHHGLILAGATP 134 (557)
T ss_pred HHHHHHHHHhCCCc------eEEEECCccHHHHHHHHhhcCC-------------CCEEEecCCccHHHHHHHHHcCCce
Confidence 45566899999985 3677888899998888777553 6799999999999999999999999
Q ss_pred EEEEecCCc-----cccCHHHHHHHhhhC--C-eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccc
Q 010897 179 KEVKLEEGY-----YVMNPVKAVELVDEN--T-ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (498)
Q Consensus 179 ~~v~~~~~~-----~~~d~~~L~~~i~~~--t-~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~ 250 (498)
+++...-+. +.++.+.+++.+.+. . +++++++| |+.|..-++++|.++++.+ ++|+.+|++++..
T Consensus 135 vyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~------~a~v~~deah~~~ 207 (557)
T COG1982 135 VYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNP-TYDGVCYNLRKIVELLHHY------GAWVLYDEAHPAH 207 (557)
T ss_pred EEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecC-ccceEeecHHHHHHHHhhc------CceEEhhhcCccc
Confidence 988775332 368999998877654 3 56777777 4569999999999999999 9999999999865
Q ss_pred cccccCCCCccccC-CCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHH
Q 010897 251 IAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (498)
Q Consensus 251 ~~~~~~~~~~~~~~-~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~ 329 (498)
.. ..+.+. +.. ...+|.++-|.||.+.+-.-.+++-+++...+.. -.++.-|... ..|-+...+++-.
T Consensus 208 ~~--~~~~l~-~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~-~r~nea~~~h-------~STSPsY~l~ASl 276 (557)
T COG1982 208 FD--FSPMLP-ESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNH-ERFNEALMMH-------QSTSPSYPLMASL 276 (557)
T ss_pred cc--ccccCc-chhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCH-HHHHHHHHHH-------ccCCchHHHHHHH
Confidence 32 122211 222 2468999999999998776667776665311110 0111111111 0122223333222
Q ss_pred -HHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCC---------------c----c-EEEEEecCCCC
Q 010897 330 -YQFIRLGFEG---YKNIMENCMGNARALREGLEKTGRFEILSKDVG---------------V----P-LVAFSLKDSSA 385 (498)
Q Consensus 330 -~~l~~lg~~g---~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~---------------~----~-~v~f~~~~~~~ 385 (498)
.+=...+..| +++.++...+.++++++...++++|.++.++.. . | =+.+.. +..+
T Consensus 277 D~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~t-p~~G 355 (557)
T COG1982 277 DVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITT-PEFG 355 (557)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEec-CCCC
Confidence 2222233333 445578888899999999999988888776520 0 0 012222 2457
Q ss_pred CCHHHHHHHHHhcCcEe
Q 010897 386 HTVFEISEGLRKFGWIV 402 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v 402 (498)
++...+++.|+++|++.
T Consensus 356 ipg~~v~~~L~e~gii~ 372 (557)
T COG1982 356 IPGAIVAKYLREHGIIP 372 (557)
T ss_pred CcHHHHHHHHHHcCCee
Confidence 89999999999999875
No 336
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.37 E-value=2.3e-10 Score=114.62 Aligned_cols=340 Identities=13% Similarity=0.100 Sum_probs=194.1
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
|++...++|.. .--.|..+|....||+. +++++|.+. .+.|..+..++.++..+..++
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~----vael~G~E~-------alpthqGRgaE~Il~~~~~~~------- 112 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAES----VKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKK------- 112 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHH----HHHHhCCce-------EEECCCCchHHHHHHHhhccc-------
Confidence 55666565553 11235567777777665 888999985 788888899998887766441
Q ss_pred cCCCCC--CcEEEEcCCchhH-HHHHHHHcCCeeEEEEec---------CCccccCHHHHHHHhhh----CCeEEEEeec
Q 010897 148 QGKPYD--KPNIVTGANVQVC-WEKFARYFEVELKEVKLE---------EGYYVMNPVKAVELVDE----NTICVAAILG 211 (498)
Q Consensus 148 ~g~~~~--~~~Iv~s~~~h~~-~~~~~~~~g~~~~~v~~~---------~~~~~~d~~~L~~~i~~----~t~~v~~~~~ 211 (498)
.|.... .+.-+++...|+- ..-.+.+.|+.++.++.+ +..+.+|+++|+++|.+ +...+..+..
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 010000 0011445555555 345677789888776432 12368999999999984 3334444443
Q ss_pred cCCc-ccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccC-------CCCcccc---CCCCeeEEEEcCCc
Q 010897 212 STLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-------PDLEWDF---RLPLVKSINVSGHK 277 (498)
Q Consensus 212 ~t~t-G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~-------~~~~~~~---~~~~~dsi~~s~hK 277 (498)
+|.. |.. +.++++.++|++| |+++|+|+|--.-.+-|+. .....++ -...+|++++|..|
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~------GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK 266 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKY------DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK 266 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHc------CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC
Confidence 4443 544 5677899999999 9999999975221000110 0000111 02579999999999
Q ss_pred cCCCCCCeEEEEEeCC---CCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010897 278 YGLVYAGVGWVVWRTK---DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAL 354 (498)
Q Consensus 278 ~l~~p~g~g~~~~~~~---~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l 354 (498)
-+++|.|. ++..+++ +.+.+.-...+.|-+- .+| |...+-.+-++..+|...-+ ...+++.....+||
T Consensus 267 glgApvGg-~Lag~d~~~~~l~~~~~~~~i~~EGf--~tY---GGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl 337 (467)
T TIGR02617 267 DAMVPMGG-LLCFKDDSFFDVYTECRTLCVVQEGF--PTY---GGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYL 337 (467)
T ss_pred CCCCcccc-eEEecchhHHHHHHHHHhhcccccCC--cCc---CchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHH
Confidence 99999884 4555555 2222211111222111 122 22223344444445543333 34556667788899
Q ss_pred HHHHhcCCCeEEeeCCCCccEEEEEe----c--CCCCCCHHHHHHHHHhc-CcEe---eeec---CCCCC----CCeeEE
Q 010897 355 REGLEKTGRFEILSKDVGVPLVAFSL----K--DSSAHTVFEISEGLRKF-GWIV---PAYT---MPANA----ENVAVL 417 (498)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~----~--~~~~~~~~~l~~~L~~~-G~~v---~~~~---~~~~~----~~~~~l 417 (498)
.+.|.+.| +.+.. . +..-|.+.. + +...+....|+-.|... |+-- -... -|... .....+
T Consensus 338 ~~~L~~~G-vpi~~-~-Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~ 414 (467)
T TIGR02617 338 VNGLEEIG-VVCQQ-A-GGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELL 414 (467)
T ss_pred HHHHHhCC-CcEEe-c-CccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcccee
Confidence 99999876 76665 3 333232221 1 22346677888877654 3321 1111 11111 113678
Q ss_pred EEeec-CCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 418 RVVVR-EDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 418 Rv~v~-~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
|+++- --.|.+.+|...+.+..+.+.-+..
T Consensus 415 RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 415 RLTIPRATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred eeccccccccHhHHHHHHHHHHHHHhhhhhc
Confidence 99983 4568888988888888777654433
No 337
>PRK06062 hypothetical protein; Provisional
Probab=99.37 E-value=1.3e-09 Score=113.35 Aligned_cols=342 Identities=13% Similarity=0.064 Sum_probs=191.1
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.+ -.+.+|.+.+++.+.+++.......+ ..+...++.+.|++++.-+. ....++++|||
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 123 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAH--ANDARSEAARLIAERAPGDL-----SKVFFTNGGAD 123 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCcc--CCHHHHHHHHHHHHhCCCCC-----CEEEEcCChHH
Confidence 566654433322 22446888888888887643321222 23334466667777763211 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CchhHHHHHHHHcCC-----------eeEEEEecCCccc------c
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-----------ELKEVKLEEGYYV------M 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~-----------~~~~v~~~~~~~~------~ 190 (498)
|+..|++.++.. .| +.+|+.-. ..|....-+....+. .+..++... .++ .
T Consensus 124 Ave~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 191 (451)
T PRK06062 124 ANEHAVRMARLH-------TG----RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPF-LYRSEFHATT 191 (451)
T ss_pred HHHHHHHHHHHh-------hC----CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCC-ccccccCCCC
Confidence 999999988653 12 34565544 455544444333321 122232211 111 1
Q ss_pred C-------HHHHHHHhhh----CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 191 N-------PVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 191 d-------~~~L~~~i~~----~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
| ++.|+++++. +..+|++--....-|.+.| +++|.++|+++ |+++++|+++.||-- .
T Consensus 192 ~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--t 263 (451)
T PRK06062 192 EEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH------GIVLIADEVMAGFGR--T 263 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeeccccCCCc--C
Confidence 2 5677888852 3345555444344577778 99999999999 999999999987621 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+. ...+. ...| ++-++....+..++|+
T Consensus 264 G~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~-i~-~~~~-~~~~~----~~~T--~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 264 GKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA-IA-ATFA-DRPYP----GGLT--YSGHPLACAAAVATIN 331 (451)
T ss_pred cHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH-HH-HHhc-cCCCC----CCCC--CCCCHHHHHHHHHHHH
Confidence 100000 1222 2576554 4655544 36777776652 21 2211 00111 1122 2233456666777777
Q ss_pred HhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCe-EEeeCCCCccEEEEEecCCC----CC--------CHHHHHHHH
Q 010897 334 RLGFEGYKNIMENCMGNA-RALREGLEK----TGRF-EILSKDVGVPLVAFSLKDSS----AH--------TVFEISEGL 395 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a-~~l~~~L~~----~~~~-~~~~~~~~~~~v~f~~~~~~----~~--------~~~~l~~~L 395 (498)
.+..+.+ .++..++. ++|.+.|++ .+.+ .+-. ..-++.+.+..+. .. -...+.+.|
T Consensus 332 ~l~~~~l---~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG---~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l 405 (451)
T PRK06062 332 AMEEEGI---VENAARIGAEVLGPGLRELAERHPSVGEVRG---LGVFWALELVADRETREPLAPYGASSAAMAAVKAAC 405 (451)
T ss_pred HHHhcCH---HHHHHHHHHHHHHHHHHHHHhcCCcEEeEec---cccEEEEEEcccccccCCCcccchhhHHHHHHHHHH
Confidence 7765543 44444444 345555544 3321 1111 1234445442110 01 134788899
Q ss_pred HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcC
Q 010897 396 RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESL 447 (498)
Q Consensus 396 ~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~ 447 (498)
.++|+++.. ..+.+|++....+|++++|++++.++++++.++..
T Consensus 406 ~~~Gvl~~~--------~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~~ 449 (451)
T PRK06062 406 KERGLLPFV--------NGNRIHVVPPCTVTEDEVREGLAILDAALAVADAA 449 (451)
T ss_pred HHCCcEEee--------cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 999987532 12468998766789999999999999999887643
No 338
>PRK07482 hypothetical protein; Provisional
Probab=99.37 E-value=1.6e-09 Score=112.87 Aligned_cols=355 Identities=14% Similarity=0.032 Sum_probs=190.9
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~----~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+... .+.+|++.+++.+.+++..+.........+.+.++.+.|++++..+. ....++++|||
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGSE 122 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM-----SKVYYGLSGSD 122 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHH
Confidence 5665544444322 24478899999988887432111111223445567777887763211 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-CCchhHHHHHHHHcC------------CeeEEEEecCCccc------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARYFE------------VELKEVKLEEGYYV------ 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s-~~~h~~~~~~~~~~g------------~~~~~v~~~~~~~~------ 189 (498)
|+..|++.++..+.. .|.. ++.+||.- ...|....-+....| -.+..++... .+.
T Consensus 123 Ave~AlKlAr~~~~~----~g~~-~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 196 (461)
T PRK07482 123 ANETQIKLVWYYNNV----LGRP-EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPH-YYRRADAGM 196 (461)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCc-cccccccCC
Confidence 999999999753211 1211 23566654 445553322222111 1123332211 011
Q ss_pred -------cCHHHHHHHhh----hCCeEEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 190 -------MNPVKAVELVD----ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 190 -------~d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
-+++.|++.+. ++..+|++--.....|.+. =+++|.++|++| |+++++|+++.||.-
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR-- 268 (461)
T PRK07482 197 SEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY------DILLIADEVVTGFGR-- 268 (461)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--
Confidence 14577888774 2344555443333335552 267899999999 999999999988621
Q ss_pred cCCCCcc-ccCCCCeeEEEEcCCccCCCCC-CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~-g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-... .+++ ..|.+++ -|.+.+++ .+|.++.+++ .. +.+.......+......| ++-+.....+..+.|
T Consensus 269 tG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~Aaa~a~L 341 (461)
T PRK07482 269 LGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK-VW-DVLEQGSDEHGAIGHGWT--YSGHPICAAAALANL 341 (461)
T ss_pred CcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH-HH-HHHhcccccCCccccCCC--CCcCHHHHHHHHHHH
Confidence 1110000 1122 2677765 46655543 6777776543 11 111110000010001112 233335566666777
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeeCCCCccEEEEEecCCC----CCC-----HHHHHHHHHhcC
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSS----AHT-----VFEISEGLRKFG 399 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G 399 (498)
+.+.+++ ..++..++.++|.+.|++ .+.+.-+.. ...++.+.+..+. ..+ ...+...|.++|
T Consensus 342 ~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG--~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G 416 (461)
T PRK07482 342 DILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEVRG--VGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERG 416 (461)
T ss_pred HHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEee--ceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCC
Confidence 7776554 344555666666666653 342111111 2234455553211 111 246888899999
Q ss_pred cEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 400 WIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 400 ~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+++.. .+ +...+|+.....+|+++++++++.++++++++
T Consensus 417 vl~~~--~~----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 417 VIARA--MP----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred cEEec--CC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 87632 11 13568888666789999999999999999765
No 339
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.36 E-value=8.4e-10 Score=114.03 Aligned_cols=347 Identities=12% Similarity=0.034 Sum_probs=191.9
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCc-CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMD-EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~-~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++...... ... .....++.++|+++++-+. ....++++|+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-----~~v~f~~sGs 115 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFT--HKPAIELCQKLVKMTPNAL-----DCVFLADSGS 115 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccC--CHHHHHHHHHHHhhCCCCC-----CEEEEeCCcH
Confidence 466554444322 224568888888888876332111 111 1223356666777764321 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEE-EEcCCchhHHHHHHHHcCCe-------------eEEEEecCCcc-----
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNI-VTGANVQVCWEKFARYFEVE-------------LKEVKLEEGYY----- 188 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~I-v~s~~~h~~~~~~~~~~g~~-------------~~~v~~~~~~~----- 188 (498)
||+..|+..++..+... |.+ ++.+| ......|....-+....|-. +..++.....+
T Consensus 116 eA~e~AlklAr~~~~~~----~~~-~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 190 (427)
T TIGR00508 116 VAVEVALKMALQYWQAK----GEK-NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWN 190 (427)
T ss_pred HHHHHHHHHHHHHHHhh----CCC-CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhH
Confidence 99999999887654321 111 12344 45556665443333322211 11222111101
Q ss_pred ccCHHHHHHHhhh--CCeEEEEeecc-CCcc-----cccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc
Q 010897 189 VMNPVKAVELVDE--NTICVAAILGS-TLTG-----EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (498)
Q Consensus 189 ~~d~~~L~~~i~~--~t~~v~~~~~~-t~tG-----~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~ 260 (498)
.-|++++++++.. ...+.+++-|- ...| ..+++++|.++|+++ ++++++|+++.|+.. ...-..
T Consensus 191 ~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~------~~llI~DEv~tG~Gr--~G~~~~ 262 (427)
T TIGR00508 191 EEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY------DILLIADEIATGFGR--TGKLFA 262 (427)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCccch
Confidence 1256777777753 23344444442 3333 237899999999999 999999999966421 111101
Q ss_pred c-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccc--cCccCCCCCCccccCCCchHHHHHHHHHHHHhc
Q 010897 261 W-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFH--INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG 336 (498)
Q Consensus 261 ~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~--~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg 336 (498)
. .+++ ..|.+++ -|.+.++ ..++.++.++. . .+.+... ..+.. ..| ++-+...+.+..++|+.+.
T Consensus 263 ~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~-~-~~~~~~~~~~~~~~----~~T--~~g~p~~~aaa~a~l~~l~ 331 (427)
T TIGR00508 263 CEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK-V-AQTISSGEAGCFMH----GPT--FMGNPLACAVAEASLAILL 331 (427)
T ss_pred hhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH-H-HHHHhcCCCCcccc----CCC--CCcCHHHHHHHHHHHHHHH
Confidence 1 1222 3566654 5655444 24565654432 1 1111110 01110 111 1222355566667776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCee
Q 010897 337 FEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVA 415 (498)
Q Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~ 415 (498)
.+ +..++..++.++|.+.|+++.....+... ....++.+.+.+ ..+...+.++|.++|+.+... ..
T Consensus 332 ~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~--~~~~~~~~~~l~~~Gv~~~~~--------~~ 398 (427)
T TIGR00508 332 EG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYK--PVNVEELQKKFVEQGVWIRPF--------GK 398 (427)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECC--ccCHHHHHHHHHHCCeEEEec--------CC
Confidence 44 34577778888898888876422212211 124556666643 234678999999999876421 13
Q ss_pred EEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 416 VLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 416 ~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
.+|++....+|.+++|++++.+++++.+
T Consensus 399 ~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 399 LIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 5888876678999999999999998853
No 340
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.34 E-value=1.2e-09 Score=113.60 Aligned_cols=323 Identities=14% Similarity=0.060 Sum_probs=178.2
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++.... ....+.+.++.+.|.+.+.. . ....++++||||+..|++.++..
T Consensus 115 h~~p~v~~av~~ql~~~~~~----~~~~~~~~~lAe~l~~~~p~-~-----~~v~f~~SGsEA~e~AlklAR~~------ 178 (474)
T PLN02482 115 HADDEVLAALAETMKKGTSF----GAPCLLENVLAEMVIDAVPS-V-----EMVRFVNSGTEACMGVLRLARAY------ 178 (474)
T ss_pred CCCHHHHHHHHHHHhhCCCC----CCCCHHHHHHHHHHHHhCCC-C-----CEEEEeCChHHHHHHHHHHHHHh------
Confidence 34688999998888764321 11335566777778887632 1 24899999999999999998653
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHc--CCe------eEEEEec--CC----ccccCHHHHHHHhhh---CCeEEEE
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYF--EVE------LKEVKLE--EG----YYVMNPVKAVELVDE---NTICVAA 208 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~--g~~------~~~v~~~--~~----~~~~d~~~L~~~i~~---~t~~v~~ 208 (498)
.| +++|+. ....|.......... |.. ...+|.. ++ .+ -|++.|++.+.. +..+|++
T Consensus 179 -tg----r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~iAavI~ 252 (474)
T PLN02482 179 -TG----REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGEIAAVIL 252 (474)
T ss_pred -cC----CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCceEEEEE
Confidence 12 356654 444565332211110 100 0001100 00 01 278899988864 2344544
Q ss_pred eeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC
Q 010897 209 ILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (498)
Q Consensus 209 ~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g 284 (498)
--.....|.+.| +++|.++|++| |+++++|+++.|+-..... ....+++ ..|.+++ -|.+.++..
T Consensus 253 Epv~g~~G~i~p~~~fl~~lr~lc~~~------g~lLI~DEV~tGfR~g~~g--a~~~~gv-~PDi~t~--gK~lggG~P 321 (474)
T PLN02482 253 EPVVGNSGFIVPKKEFLEGLREITKEN------GALLVFDEVMTGFRIAYGG--AQEYFGI-TPDLTTL--GKVIGGGLP 321 (474)
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCeecCcch--HhHHhCC-CCCEEEe--cchhhCCCc
Confidence 444344566655 45799999999 9999999999776321100 0011232 2566554 576666667
Q ss_pred eEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 010897 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-- 362 (498)
Q Consensus 285 ~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-- 362 (498)
+|.++.+. +.. +.+... +......| ++-+.....+..++|+.+..+ ...++..++.++|.+.|+++.
T Consensus 322 igav~g~~-ei~-~~~~~~----~~~~~~~T--~~gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~ 390 (474)
T PLN02482 322 VGAYGGRR-EIM-EMVAPA----GPMYQAGT--LSGNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKK 390 (474)
T ss_pred eEEEEEcH-HHH-HhhccC----CCcccccC--cchhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHh
Confidence 88886553 221 111100 00000111 122224455566667666543 356667777777777776542
Q ss_pred -CeEEeeCCCCccEEEEEecCCC--------CCC---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHH
Q 010897 363 -RFEILSKDVGVPLVAFSLKDSS--------AHT---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLV 430 (498)
Q Consensus 363 -~~~~~~~~~~~~~v~f~~~~~~--------~~~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~ 430 (498)
++.+.... ..+++.+.+..+. .-+ ...+.+.|.++|+.+.....+. . .+...+|.+++
T Consensus 391 ~g~~~~~~~-v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-----~----~psl~ht~~dI 460 (474)
T PLN02482 391 AGHEMCGGY-ISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-----G----FTSLAHTEEDI 460 (474)
T ss_pred cCCCEEEcc-cceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC-----C----cCCCCCCHHHH
Confidence 12222111 1224433332110 012 2467888999998764322111 1 13456699999
Q ss_pred HHHHHHHHHHHHH
Q 010897 431 ERLISHIEEVLKE 443 (498)
Q Consensus 431 ~~l~~~l~~~l~~ 443 (498)
|++++.+++++++
T Consensus 461 d~~l~al~~~l~~ 473 (474)
T PLN02482 461 DFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 341
>PRK12403 putative aminotransferase; Provisional
Probab=99.34 E-value=2.4e-09 Score=111.61 Aligned_cols=337 Identities=13% Similarity=0.070 Sum_probs=182.6
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++.......+....+...++.+.|+++++.+. ....++++||||+..|++.++..+..
T Consensus 71 ~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AiklAr~~~~~---- 141 (460)
T PRK12403 71 GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-----SHAIYTNSGSEANEVLIRTVRRYWQV---- 141 (460)
T ss_pred CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh----
Confidence 468899999888877432211112234445566777888875321 23899999999999999998764321
Q ss_pred cCCCCCCcEEEE-cCCchhHHHHHHHHcCCe-----------eEEEEecCCccc----c--------CHHHHHHHhh---
Q 010897 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEVE-----------LKEVKLEEGYYV----M--------NPVKAVELVD--- 200 (498)
Q Consensus 148 ~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~-----------~~~v~~~~~~~~----~--------d~~~L~~~i~--- 200 (498)
.|.+ ++..|+. ....|.+..-+....|.. +..+|... .|+ + +.+.|++.+.
T Consensus 142 ~g~~-~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 219 (460)
T PRK12403 142 LGKP-QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPY-WYANGGELTPAEFGRRAALQLEEKILELG 219 (460)
T ss_pred hCCC-CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCc-ccccccCCChHHHHHHHHHHHHHHHHHhC
Confidence 1211 1234443 344677655555544432 22332110 010 1 1345665553
Q ss_pred -hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEc
Q 010897 201 -ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVS 274 (498)
Q Consensus 201 -~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s 274 (498)
++..+|++--.....|.+.| +++|.++|++| |+++++|++++|+-- ...-... .+++. .|.+++
T Consensus 220 ~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--tG~~~a~e~~gv~-PDiv~~- 289 (460)
T PRK12403 220 AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY------DVLLCADEVIGGFGR--TGEWFAHEHFGFE-PDTLSI- 289 (460)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhhhhhcCCC-CCeEEE-
Confidence 23445555444444577777 99999999999 999999999987621 1110010 12332 476653
Q ss_pred CCccCCCCC-CeEEEEEeCCCCCCccccccc-CccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHH-HHH
Q 010897 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM-GNA 351 (498)
Q Consensus 275 ~hK~l~~p~-g~g~~~~~~~~~l~~~~~~~~-~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~-~~a 351 (498)
-|.+.+++ .+|.++.+++ . .+.+.... .|+ ...| ++-+.....+..++|+.+.++.+ .++.. ++.
T Consensus 290 -gK~lggG~~Piga~v~~~~-i-~~~~~~~~~~~~----~~~T--~~gnPl~~Aaala~L~~i~~~~l---~~~~~~~~g 357 (460)
T PRK12403 290 -AKGLTSGYVPMGGLVLSKR-I-AEALVEQGGVFA----HGLT--YSGHPVAAAVAIANLKALRDEGV---VTRVKDDTG 357 (460)
T ss_pred -cccccccccceEEEEECHH-H-HHHHhcCCCccc----cCCC--CCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHH
Confidence 56655553 6777776532 2 12111000 111 0111 22334566667777777765543 44443 555
Q ss_pred HHHHHHHhcC-CCeEEeeCCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEe
Q 010897 352 RALREGLEKT-GRFEILSKDV-GVPLVAFSLKDSS----AHT-----VFEISEGLRKFGWIVPAYTMPANAENVAVLRVV 420 (498)
Q Consensus 352 ~~l~~~L~~~-~~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~ 420 (498)
++|.+.|+++ ..+.++..-. ...+..+.+..+. ... ...+...+.++|+++... + ..+|++
T Consensus 358 ~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------~-~~~~l~ 429 (460)
T PRK12403 358 PYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-------L-GRMIMA 429 (460)
T ss_pred HHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec-------C-CEEEEE
Confidence 5665555432 1111222111 2234455553211 011 223556678899886421 1 236766
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 421 VREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 421 v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
--..+|.++++++++.++++++++.
T Consensus 430 Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 430 PALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5445599999999999999998763
No 342
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.33 E-value=3.1e-09 Score=107.66 Aligned_cols=342 Identities=15% Similarity=0.079 Sum_probs=200.6
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~~----~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.++.. .+.+|.+.+++.+.+..-.+....+..+ +..-++.+.|.+++-.+ . .....++++|+|
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~-e~~v~~ae~L~~~~p~~--~--~~~~~f~~sGae 128 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYY-EPYVELAEKLTALAPGS--G--LKKVFFGNSGAE 128 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccc-hhHHHHHHHHHHhCCcc--c--CCeEEecCCcHH
Confidence 5677665566322 2347888888887665522111111110 22224445566655432 1 134899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcCC-------------eeEEEEecCCccc----c
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV----M 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~----~ 190 (498)
||-.|++.++... | ++.|| .....|....-+..+.|- .+..+|... .|+ +
T Consensus 129 A~E~AiKiAr~~T-------g----r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~-~yr~p~~~ 196 (447)
T COG0160 129 AVEAAIKIARAYT-------G----RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPN-PYRCPFGI 196 (447)
T ss_pred HHHHHHHHHHHHh-------C----CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCc-cccCcccC
Confidence 9999999987652 1 34454 555667665555554332 255666432 121 1
Q ss_pred --------CHHHHHHHhhh------CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccc
Q 010897 191 --------NPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (498)
Q Consensus 191 --------d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~ 252 (498)
..+.++..+.+ ++.++++--....-|.+.| ++++.++|++| |+++++|+++.|+.-
T Consensus 197 ~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~------gillI~DEVQtG~GR 270 (447)
T COG0160 197 GGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH------GILLIADEVQTGFGR 270 (447)
T ss_pred chhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc
Confidence 12345554432 3566666655555677644 67899999999 999999999988642
Q ss_pred cccCCCCcccc---CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHH
Q 010897 253 PFLYPDLEWDF---RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (498)
Q Consensus 253 ~~~~~~~~~~~---~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~ 329 (498)
.. .-|-+ ++ ..|.++++ |-+.++..+|.++.|.. .. + +..+. ..+| +.-+.....+..
T Consensus 271 --TG--~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~e-i~-~-------~~~g~-~~~T--f~GNpva~Aaa~ 331 (447)
T COG0160 271 --TG--KMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAE-IM-D-------WPPGG-HGGT--FGGNPVACAAAL 331 (447)
T ss_pred --cc--cchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHH-hc-c-------cCCcc-cCCC--CCcCHHHHHHHH
Confidence 11 11222 22 35777653 66666777888886643 21 1 11111 1111 111224555556
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCCcc-EEEEEecCCC---CCC---HHHHHHHHHhcCcE
Q 010897 330 YQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVP-LVAFSLKDSS---AHT---VFEISEGLRKFGWI 401 (498)
Q Consensus 330 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~~---~~~---~~~l~~~L~~~G~~ 401 (498)
+.|+.+.++ ...++..++.++|.+.|.++- .+.++.+-.+.+ ++.+.+..+. .-+ ..++++++.++|.+
T Consensus 332 AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Gli 408 (447)
T COG0160 332 AVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLL 408 (447)
T ss_pred HHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 666655555 566777778888888877542 244454432333 3333443211 112 46889999999987
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+... ....+++|+.---.++++++|.+++.|+++++..
T Consensus 409 l~~~-----G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 409 LLTC-----GPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred Eecc-----CCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 6442 2346789998777789999999999999998753
No 343
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.31 E-value=3.5e-09 Score=110.41 Aligned_cols=345 Identities=13% Similarity=0.058 Sum_probs=182.7
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++...... .....+.+.++.+.|++++.-+.. ....++++|||
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~~----~~v~f~~sGse 126 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF-NVMMYEPYIELAEKLAALAPGSFD----KKVLFLNSGAE 126 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc-cccccHHHHHHHHHHHHhCCCCCC----CEEEEcCCcHH
Confidence 466544433332 124468888988888876332111 011233445667778887642210 14899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCC-c--cccC
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEG-Y--YVMN 191 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~-~--~~~d 191 (498)
|+..|++.++.. . | +.+|+. ....|....-+....+- ++..+|.... + ..+.
T Consensus 127 A~e~AlklAr~~-t------g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 127 AVENAVKIARKY-T------K----RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred HHHHHHHHHHHH-h------C----CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 999999988653 1 2 345554 44566544444333221 1233332110 0 0010
Q ss_pred --------HHHHHHHh----hhCCeEEEEeeccCCc-cccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 192 --------PVKAVELV----DENTICVAAILGSTLT-GEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 192 --------~~~L~~~i----~~~t~~v~~~~~~t~t-G~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
++.+++.+ ..+..+.++.-|-... |.+. -+++|.++|+++ |+++++|+++.++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~------gillI~DEV~tg~gr-- 267 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH------GILFVADEIQTGFAR-- 267 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--
Confidence 12344433 2233444444555444 4432 278899999999 999999999987631
Q ss_pred cCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 255 LYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 255 ~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
....... .++. ..|.+ +..|.+.++..+|+++.+.+ .. +.+. . .....+ +.-+.....+..+++.
T Consensus 268 ~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v~~~~~-i~-~~~~--~-----~~~~~T--~~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 268 TGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGVIGRKE-IM-DESA--P-----GELGGT--YAGSPLGCAAALAVLD 333 (451)
T ss_pred cCceehhHhcCC-CCCEE--eeehhhcCCCccEEEEEcHH-HH-hccC--C-----CCcCcC--CCcCHHHHHHHHHHHH
Confidence 1110100 1111 24544 45677777788999987542 21 1111 0 001111 1222233444445555
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeeCCCCccEEEEEec-CC-----CCCCHHHHHHHHHhcCcEee
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLK-DS-----SAHTVFEISEGLRKFGWIVP 403 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~-~~-----~~~~~~~l~~~L~~~G~~v~ 403 (498)
.+..+.+. ++..++.+++.+.|++ .+.+.-+.. ...++.+.+. +. +......+.+.+.++|+.+.
T Consensus 334 ~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~~~~vrg--~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~ 408 (451)
T PRK06918 334 IIEKENLN---DRAIELGKVVMNRFEEMKNKYNCIGDVRG--LGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLL 408 (451)
T ss_pred HHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCCceeecc--ceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEe
Confidence 55444443 3444445555555544 332111212 2344444442 11 11124567788889998764
Q ss_pred eecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 404 AYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 404 ~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
.. . ....++|++....++.++++++++.|+++++.+.
T Consensus 409 ~~----~-~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 409 SA----G-TYGNVIRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred ec----C-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 31 1 1125799998666789999999999999997764
No 344
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.31 E-value=3.8e-09 Score=109.33 Aligned_cols=322 Identities=12% Similarity=0.038 Sum_probs=180.8
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+.+..... ...+.+.++.+.|.+++.. . ....++++||||+..|++.++..
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~----~~~~~~~~la~~l~~~~p~-~-----~~v~f~~sGseA~e~AlklAr~~------ 132 (428)
T PRK12389 69 HAHPHITKAITEAAENGVLYG----TPTELEIEFAKMLKEAIPS-L-----EKVRFVNSGTEAVMTTIRVARAY------ 132 (428)
T ss_pred CCCHHHHHHHHHHHHhCCccC----CCCHHHHHHHHHHHHhCCC-C-----cEEEEeCCHHHHHHHHHHHHHHh------
Confidence 346888888888887643211 1223344666667776531 1 24899999999999999988753
Q ss_pred hcCCCCCCcEEE-EcCCchhHHHHHHHHcCCeeEE--------EE--ecCCcc---ccCHHHHHHHhhh---CCeEEEEe
Q 010897 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKE--------VK--LEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (498)
Q Consensus 147 ~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~~~~--------v~--~~~~~~---~~d~~~L~~~i~~---~t~~v~~~ 209 (498)
.| +.+|+ .....|....-+....|..... ++ ..++.. .-|++.+++.+.. +..+|++-
T Consensus 133 -tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 133 -TG----RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred -hC----CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 12 34555 4555666544444433321100 00 000000 1278889888863 34555555
Q ss_pred eccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCe
Q 010897 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (498)
Q Consensus 210 ~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~ 285 (498)
-.....|.+.| +++|.++|+++ |+++++|+++.||-..+..- ...+++ ..|.+++ -|.+.++..+
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~Rt~~~~a--~~~~gv-~PDivt~--gK~lggG~Pi 276 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEA------GALVIYDEVITAFRFMYGGA--QDLLGV-EPDLTAL--GKIIGGGLPI 276 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCcchh--hHHhCC-CCCeeee--chhhcCCCce
Confidence 44445577777 99999999999 99999999998862211100 001222 2565544 5666555667
Q ss_pred EEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----C
Q 010897 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK----T 361 (498)
Q Consensus 286 g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~ 361 (498)
|.++.+. +.. +.+... +......| ++-+.....+..+.|+.+..++ ..++..++.++|.+.|++ .
T Consensus 277 ~av~~~~-~i~-~~~~~~----~~~~~~~T--~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~ 345 (428)
T PRK12389 277 GAYGGRK-DIM-EQVAPL----GPAYQAGT--MAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKH 345 (428)
T ss_pred eEEeEHH-HHH-hhhccC----CCcccccC--CccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 7776553 221 211100 00000111 2233355666667777775543 556677777777777765 3
Q ss_pred CC-eEEeeCCCCccEEEEEecCCCCC--------C---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHH
Q 010897 362 GR-FEILSKDVGVPLVAFSLKDSSAH--------T---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSL 429 (498)
Q Consensus 362 ~~-~~~~~~~~~~~~v~f~~~~~~~~--------~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~ 429 (498)
|. ..+.. ..+++.+.+...... + ...+.+.|.++|+++.... ...+. +...+|+++
T Consensus 346 ~~~~~v~r---~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~--~~l~~t~e~ 413 (428)
T PRK12389 346 GITITINR---LKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK-------YEAWF--LTTAHTEED 413 (428)
T ss_pred CCCEEEEe---cCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC-------CCCee--ecCCCCHHH
Confidence 41 12211 122444444211100 1 3577888999998864321 11122 335569999
Q ss_pred HHHHHHHHHHHHHH
Q 010897 430 VERLISHIEEVLKE 443 (498)
Q Consensus 430 ~~~l~~~l~~~l~~ 443 (498)
++++++.+++++++
T Consensus 414 id~~~~~l~~~l~~ 427 (428)
T PRK12389 414 IEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988864
No 345
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=5.5e-09 Score=107.92 Aligned_cols=340 Identities=12% Similarity=0.032 Sum_probs=184.8
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCC-CcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~s 127 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++.... +..++ .....++.+.|++++..+. .....++++||
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~----~~~~~f~~sGs 111 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVP--YASYVTLAERINALAPIDG----PAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccC--ChHHHHHHHHHHHhCCCCC----CceEEEeCCcH
Confidence 466544433322 2245688888888888763321 11111 2223355566777664211 12488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCCe-------------eEEEEecCCc----cc
Q 010897 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEVE-------------LKEVKLEEGY----YV 189 (498)
Q Consensus 128 ea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~-------------~~~v~~~~~~----~~ 189 (498)
||+..|++.++.. .| +++|+. ....|....-+....+.. +..++..+.. ..
T Consensus 112 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 112 EAVENAVKIARAY-------TG----RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred HHHHHHHHHHHHh-------hC----CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 9999999988653 12 345654 445666544444333311 1222221110 01
Q ss_pred cCHHHHHHHhhh-----CCeEEEEeeccCCcccc-cC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc
Q 010897 190 MNPVKAVELVDE-----NTICVAAILGSTLTGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (498)
Q Consensus 190 ~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~-~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~ 260 (498)
-+++.+++.+.. +..+|++.-.....|.. .| +++|.++|+++ |+++++|++|.|+.- ...-..
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~g~~~~ 252 (421)
T PRK06777 181 EALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH------GILLIADEVQTGFAR--TGKLFA 252 (421)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCcc--CCchhh
Confidence 236677877752 34455554444444533 33 89999999999 999999999987631 111000
Q ss_pred c-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH
Q 010897 261 W-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG 339 (498)
Q Consensus 261 ~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g 339 (498)
. .+++ ..|.++ .-|.+.++..+|+++.+.. .. +.+.. .....+ ++-+.....+..++|..+..
T Consensus 253 ~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~-i~-~~~~~-------~~~~~T--~~~~p~~~aaa~a~L~~~~~-- 316 (421)
T PRK06777 253 MEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE-VM-DAPAP-------GGLGGT--YAGNPLAVAAALAVLDVIAE-- 316 (421)
T ss_pred hhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH-HH-hccCC-------CCCCCC--CCcCHHHHHHHHHHHHHHHh--
Confidence 0 1121 245543 4566656678999987642 21 21110 001112 22222444455555554433
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCeEEeeCCCCccEEEEEecCC-CCCC----HHHHHHHHHhcCcEeeeecCCCC
Q 010897 340 YKNIMENCMGNARALREGLEKT----GRFEILSKDVGVPLVAFSLKDS-SAHT----VFEISEGLRKFGWIVPAYTMPAN 410 (498)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~-~~~~----~~~l~~~L~~~G~~v~~~~~~~~ 410 (498)
.+..++..++.++|.+.|+++ +.+.-+. + ...++.+.+..+ ...+ ...+...|.++|+++... .
T Consensus 317 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-g-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~----~ 389 (421)
T PRK06777 317 -EKLCQRALILGAHLVEVLEKAKASCPAIVDIR-A-RGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSC----G 389 (421)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEec-C-ceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeec----C
Confidence 356677777888888887764 3222221 2 234444444321 1111 245566678899876431 1
Q ss_pred CCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 411 AENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 411 ~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
....++|++.-...+++++++.++.|++++
T Consensus 390 -~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 390 -VHGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred -CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 112579998755689999999988888776
No 346
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=1e-08 Score=106.79 Aligned_cols=325 Identities=12% Similarity=0.053 Sum_probs=184.1
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++..+.... ...+...++.+.|+++++.+. ....++++|+||+..|++.++..
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~------- 153 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSPRR--FTNETAIECAEKLTEIAGGEL-----NRVLFAPGGTSAIGMALKLARHI------- 153 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccCc--cCCHHHHHHHHHHHHhCCCCC-----CEEEECCCcHHHHHHHHHHHHHh-------
Confidence 5688889998888764332211 223445567777888875321 24899999999999999888643
Q ss_pred cCCCCCCcEEE-EcCCchhHHHHHHHHcCC------------eeEEEEecCCccc-----c------CHHHHHHHhhh--
Q 010897 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEGYYV-----M------NPVKAVELVDE-- 201 (498)
Q Consensus 148 ~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~-----~------d~~~L~~~i~~-- 201 (498)
.| +.+|+ .....|....-+....|. .+..+|... .++ . +++.|++.++.
T Consensus 154 tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 154 TG----NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAV-SYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred cC----CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCc-ccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 12 34554 455566655444433332 123333211 011 1 13557777752
Q ss_pred CCeEEEEeeccCCccc-ccC---HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCC
Q 010897 202 NTICVAAILGSTLTGE-FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGH 276 (498)
Q Consensus 202 ~t~~v~~~~~~t~tG~-~~~---l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~h 276 (498)
+..+|++ -|-...|. +.| +++|.++|++| |+++++|+++.|+-- ...-... .+++ ..|.+++ -
T Consensus 229 ~vAavIv-EPv~g~g~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--tG~~fa~e~~gv-~PDiv~~--g 296 (459)
T PRK06082 229 GIGAFIA-EAVRNTDVQVPSKAYWKRVREICDKH------NVLLIIDEIPNGMGR--TGEWFTHQAYGI-EPDILCI--G 296 (459)
T ss_pred CEEEEEE-CCccCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHhHhhCC-CCCEEEe--c
Confidence 3444444 33333343 334 89999999999 999999999987521 1100000 1122 2576653 5
Q ss_pred ccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010897 277 KYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (498)
Q Consensus 277 K~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~ 355 (498)
|.+.++ ..+|.++.++. .. ..+ ...+ . .+| ++-+.....+..+.|+.+..++ ..++..++.++|.
T Consensus 297 Kgl~gG~~P~~av~~~~~-i~-~~~--~~~~----~-~~T--~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~ 362 (459)
T PRK06082 297 KGLGGGLVPIAAMITKDK-YN-TAA--QISL----G-HYT--HEKSPLGCAAALATIEVIEQEG---LLEKVKADSQFMR 362 (459)
T ss_pred ccccCCCCcceEEEEcHH-HH-hhc--cCCC----C-CCC--CCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 665554 36777776643 11 110 1000 0 122 2222345556666777665443 5566777777777
Q ss_pred HHHhcCC-CeEEeeCCC-CccEEEEEecCCC---CCC---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCH
Q 010897 356 EGLEKTG-RFEILSKDV-GVPLVAFSLKDSS---AHT---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSR 427 (498)
Q Consensus 356 ~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~---~~~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~ 427 (498)
+.|+++- .+.++..-. ...++.+.+..+. ..+ ...+...+.++|+++.. .+..++|++--..+|.
T Consensus 363 ~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~-------~~~~~i~~~Ppl~it~ 435 (459)
T PRK06082 363 ERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV-------SQGNVIQLSPPLIITR 435 (459)
T ss_pred HHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe-------cCCCEEEEeCCCccCH
Confidence 7776541 111222111 2334555553211 111 34677888899987642 1235689886556799
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010897 428 SLVERLISHIEEVLKEI 444 (498)
Q Consensus 428 ~~~~~l~~~l~~~l~~l 444 (498)
++++++++.+++++.++
T Consensus 436 ~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 436 EELTQALAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999876
No 347
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=1.6e-08 Score=105.14 Aligned_cols=345 Identities=15% Similarity=0.082 Sum_probs=193.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++-......+. ......++.+.|++++..+. ....++++|||
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 124 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYT-HSERAIRVAEKLAEISPIEN-----PKVLFGLSGSD 124 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCcc-CCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHH
Confidence 466554444432 223468888889888876322111111 12333356667777764321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV----- 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~----- 189 (498)
|+..|++.++.. .| +++|+. ....|....-+....+. ++..+|.... ++
T Consensus 125 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ 192 (457)
T PRK05639 125 AVDMAIKVSKFS-------TR----RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGI 192 (457)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccc
Confidence 999999998643 12 345665 44566654444333221 1334443211 11
Q ss_pred ---cCH--------HHHHHHhh------hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 190 ---MNP--------VKAVELVD------ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 190 ---~d~--------~~L~~~i~------~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
-|+ +.+++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.
T Consensus 193 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEv~t 266 (457)
T PRK05639 193 NGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH------GILLVMDEVQT 266 (457)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhh
Confidence 022 23455442 23455555433333455433 78899999999 99999999998
Q ss_pred cccccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHH
Q 010897 249 GFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (498)
Q Consensus 249 g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a 327 (498)
||-. ...-... .+++ ..|.+++ -|.+.++.++|.++.++. .. +. ....+ .+|. .-+.....+
T Consensus 267 G~Gr--tG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~-i~-~~--~~~~~------~~T~--~g~p~~~aa 329 (457)
T PRK05639 267 GIGR--TGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKE-LM-DL--TSGSA------LLTP--AANPVISAA 329 (457)
T ss_pred ccCc--CchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHH-HH-hh--cCCCc------ccCC--CcCHHHHHH
Confidence 7521 1100000 1233 3677774 577666677888876543 21 11 00011 1222 222344555
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEeeCCC-CccEEEEEecCCCC-CC---HHHHHHHHHhcCcE
Q 010897 328 QYYQFIRLGFEGYKNIMENCMGNARALREGLEKT-GRFEILSKDV-GVPLVAFSLKDSSA-HT---VFEISEGLRKFGWI 401 (498)
Q Consensus 328 ~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~-~~~~v~f~~~~~~~-~~---~~~l~~~L~~~G~~ 401 (498)
..+.|+.+..+. ..++..++.++|.+.|+++ .++.++..-. ..-++.+.+..+.. -+ ...+.+.|.++|++
T Consensus 330 a~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~ 406 (457)
T PRK05639 330 AEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLI 406 (457)
T ss_pred HHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeE
Confidence 666676665543 4566666777777777663 1122222211 22344444422111 11 35778889999988
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
+... ..+..++|+.....+|++++|++++.|+++++.+.+
T Consensus 407 ~~~~-----g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 407 LPSY-----GMFGNVIRITPPLVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred Eeec-----CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 6432 122467999988889999999999999999987643
No 348
>PRK07036 hypothetical protein; Provisional
Probab=99.27 E-value=9.5e-09 Score=107.22 Aligned_cols=354 Identities=14% Similarity=0.048 Sum_probs=188.6
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.. -.+.+|++.+++.+.+++-.+.........+.+.++.+.|.+++..+. ....++++|||
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGse 123 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL-----NHVFLTTGGST 123 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchH
Confidence 566544333321 224468888888888876322111111223344566677777753211 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCC---cccc--
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEG---YYVM-- 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~---~~~~-- 190 (498)
|+..|++.++..+. .+ |.. ++.+|+. ....|....-+....|- .+..+|.... ...+
T Consensus 124 Ave~AlklAr~~~~-~~---g~t-~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 198 (466)
T PRK07036 124 AVDSALRFVHYYFN-VR---GRP-AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSE 198 (466)
T ss_pred HHHHHHHHHHHHHH-hc---CCC-CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCCh
Confidence 99999998865321 11 211 1345554 44566544333332221 1333332110 0011
Q ss_pred ------CHHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccc-c-c
Q 010897 191 ------NPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-F 254 (498)
Q Consensus 191 ------d~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~-~-~ 254 (498)
.++.+++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.||-- . +
T Consensus 199 ~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 199 AAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY------DILYISDEVVTGFGRLGHF 272 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCcCchh
Confidence 1234555554 23455555544444577666 89999999999 999999999977621 1 1
Q ss_pred cCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCC--CCCCccccCCCchHHHHHHHHH
Q 010897 255 LYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGS--DQPTFTLNFSKGSSQIIAQYYQ 331 (498)
Q Consensus 255 ~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~--~~~~~~l~~sr~~~~~~a~~~~ 331 (498)
+.- ...+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+. ..+..+ .....| ++-+.....+..+.
T Consensus 273 ~~~--~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~-i~-~~~~--~~~~~~~~~~~~~T--~~gnpl~~aaa~a~ 341 (466)
T PRK07036 273 FAS--EAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER-LL-DVIS--GPNAKGNVFTHGFT--YSGHPVACAAALKN 341 (466)
T ss_pred hhh--hhhcCC-CCCEEEE--ccccccCccccEEEEEcHH-HH-HHHh--cccCcCcccccCCC--CCCCHHHHHHHHHH
Confidence 110 001222 2566655 4555444 35787876642 21 2111 000000 001112 22233455556666
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCC------CC---HHHHHHHHHhcCcE
Q 010897 332 FIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA------HT---VFEISEGLRKFGWI 401 (498)
Q Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~------~~---~~~l~~~L~~~G~~ 401 (498)
|+.+..+ +..++..++.++|.+.|+++....++..-. ...++.+.+..+.. .+ ...+.+.+.++|++
T Consensus 342 Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 418 (466)
T PRK07036 342 IEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLL 418 (466)
T ss_pred HHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcE
Confidence 6666544 455667777777777776542222222111 22344555532110 11 24677888999987
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+... + ..+|++....+|+++++++++.++++++.+
T Consensus 419 ~~~~-------~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 419 VRPL-------E-HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred Eeec-------C-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 6421 1 357777544569999999999999999776
No 349
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.27 E-value=4.4e-09 Score=108.41 Aligned_cols=348 Identities=11% Similarity=0.010 Sum_probs=190.2
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++....... ....+...++.+.|++++..+. ....++++|||
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~SGsE 114 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG-GITHPPAIELCRKLVAMTPQPL-----ECVFLADSGSV 114 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc-ccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHH
Confidence 466544333321 2244688999998888764322111 1122334466677877764221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCc----c-c
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGY----Y-V 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~----~-~ 189 (498)
|+..|++.++..+... | .++.+|+. ....|....-+....+- .+..+|..... + .
T Consensus 115 Ave~AlklAr~~~~~~----g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 188 (428)
T PRK07986 115 AVEVAMKMALQYWQAK----G--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188 (428)
T ss_pred HHHHHHHHHHHHHHhc----C--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHH
Confidence 9999999887643211 1 12455654 44555533322222221 12233321110 1 2
Q ss_pred cCHHHHHHHhhh---CCeEEEEeec--cCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc
Q 010897 190 MNPVKAVELVDE---NTICVAAILG--STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (498)
Q Consensus 190 ~d~~~L~~~i~~---~t~~v~~~~~--~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~ 260 (498)
-|++++++.+.. +..+|+ +-| ....|.+ ..+++|.++|+++ |+++++|+++.|+-. ...-..
T Consensus 189 ~d~~~l~~~l~~~~~~iaavi-~Epi~~g~gg~~~~~~~~L~~l~~lc~~~------g~lLI~DEv~tG~Gr--tG~~fa 259 (428)
T PRK07986 189 RDIAPFARLMAAHRHEIAAVI-LEPIVQGAGGMRIYHPEWLKRVRKLCDRE------GILLIADEIATGFGR--TGKLFA 259 (428)
T ss_pred HHHHHHHHHHHhCCCcEEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CCCeee
Confidence 366788888853 233444 333 2223432 3489999999999 999999999976521 111000
Q ss_pred c-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH
Q 010897 261 W-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (498)
Q Consensus 261 ~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~ 338 (498)
. .+++ ..|.+++ -|.+.++ ..+|.++.++. . .+.+.... . +......| ++-++..+.+..++|+.+.++
T Consensus 260 ~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~-i-~~~~~~~~-~-~~~~~~~T--~~g~p~~~aaa~a~L~~i~~~ 330 (428)
T PRK07986 260 CEHAGI-APDILCL--GKALTGGTMTLSATLTTRE-V-AETISNGE-A-GCFMHGPT--FMGNPLACAVANASLSLLESG 330 (428)
T ss_pred ecccCC-CCCEEEe--chhhhCCcccCcchhchHH-H-HHHhhcCC-C-CccccCCC--CCcCHHHHHHHHHHHHHHHhC
Confidence 0 1122 2466653 4554443 35566665432 1 11111000 0 00001112 223345666666777776554
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEE
Q 010897 339 GYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVL 417 (498)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~l 417 (498)
+ ..++..++.++|.+.|+++.....+.+-. ...++.+.+..+ .+...+.+.|.++|+++... + .++
T Consensus 331 ~---~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~--~~~~~~~~~l~~~Gl~~~~~-------g-~~i 397 (428)
T PRK07986 331 D---WQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRP--VNMAALQRFFVEQGVWIRPF-------G-KLI 397 (428)
T ss_pred C---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCc--ccHHHHHHHHHHCCcEEEec-------C-CEE
Confidence 3 46677777888888887652222222111 234555555432 24568899999999886431 1 468
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 418 RVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 418 Rv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
|+.--..+|+++++++++.|+++++.
T Consensus 398 ~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 398 YLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 98766668999999999999988853
No 350
>PRK07481 hypothetical protein; Provisional
Probab=99.26 E-value=2e-08 Score=104.47 Aligned_cols=342 Identities=13% Similarity=0.088 Sum_probs=180.0
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+.+..+.........+.+.++.+.|+++++-+ + .....++++||||+..|++.++..+..
T Consensus 58 h~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-~---~~~v~f~~sGsEAve~AlklAr~~~~~--- 130 (449)
T PRK07481 58 HNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPE-G---MRRVFFSSGGSDSVETALKLARQYWKV--- 130 (449)
T ss_pred CCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCC-C---CCEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 346888888888887643211110112233445666787776411 1 124899999999999999998764321
Q ss_pred hcCCCCCCcEEE-EcCCchhHHHHHHHHcCC------------eeEEEEecCC---ccc-cCHHH--------HHHHhh-
Q 010897 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEG---YYV-MNPVK--------AVELVD- 200 (498)
Q Consensus 147 ~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~---~~~-~d~~~--------L~~~i~- 200 (498)
.|.+ ++.+|+ .....|....-+....+- ++..++.... .|. -|++. ++++|.
T Consensus 131 -~g~~-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~ 208 (449)
T PRK07481 131 -RGQP-ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF 208 (449)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 234555 444566544333222211 1233322110 011 14433 344443
Q ss_pred ---hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccc-c-ccCCCCccccCCCCeeEE
Q 010897 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSI 271 (498)
Q Consensus 201 ---~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~-~-~~~~~~~~~~~~~~~dsi 271 (498)
++..+|++--.....|.+.| +++|.++|+++ |+++++|+++.||-- . ++.-+ .+++ ..|.+
T Consensus 209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~a~~---~~gv-~PDiv 278 (449)
T PRK07481 209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH------GILLIADEVVTGFGRTGSWFGSR---GWGV-KPDIM 278 (449)
T ss_pred cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCcCchhhHhh---hcCC-CCCEE
Confidence 23455555544444466544 88999999999 999999999987621 0 11111 1122 25766
Q ss_pred EEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (498)
Q Consensus 272 ~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~ 350 (498)
++ -|.+.++ ..+|.++.+++ .. +.+.......+......| ++-+.....+..+.|+.+.+++ ..++..++
T Consensus 279 ~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~ 349 (449)
T PRK07481 279 CL--AKGITSGYVPLGATMVNAR-IA-DAFEANADFGGAIMHGYT--YSGHPVACAAALATLDIVVRED---LPANAAKR 349 (449)
T ss_pred EE--eecccCCCcCceEEEEcHH-HH-HHHhccCccccccccCCC--CCCCHHHHHHHHHHHHHHHhhh---HHHHHHHH
Confidence 65 4555444 35777777642 11 111110000000001112 2222345556666676665543 45566666
Q ss_pred HHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEE
Q 010897 351 ARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS----AHT-----VFEISEGLRKFGWIVPAYTMPANAENVAVLRV 419 (498)
Q Consensus 351 a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv 419 (498)
.++|.+.|+++- .+.++..-. ...++.+.+..+. ..+ ...+.+.|.++|+++... + ..+|+
T Consensus 350 g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------g-~~i~l 421 (449)
T PRK07481 350 GAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS-------G-TKIIL 421 (449)
T ss_pred HHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-------C-CEEEE
Confidence 777777776542 122222111 2234445553211 111 246778889999876421 1 24787
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 420 VVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 420 ~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+--..+|++++|++++.++++++++
T Consensus 422 ~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 422 SPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7544569999999999999998754
No 351
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.26 E-value=4.9e-09 Score=108.15 Aligned_cols=339 Identities=10% Similarity=-0.030 Sum_probs=180.5
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+.+.... .. ..+.+.++.+.|.++++... ....++++|+|
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--~~--~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGsE 121 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSY--GL--TSEQEILFAEELFSYLGLED-----HKIRFVSSGTE 121 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCC--CC--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHH
Confidence 466544333322 1245688888888888763321 11 12344466677777774321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHH---HHHHHcCCe---e-EEE--E-ecCCcc---ccCHHH
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWE---KFARYFEVE---L-KEV--K-LEEGYY---VMNPVK 194 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~---~~~~~~g~~---~-~~v--~-~~~~~~---~~d~~~ 194 (498)
|+..|++.++.. .| +.+|+. ....|.... .+....+-. . ... + ...... .-|++.
T Consensus 122 A~e~AiklAr~~-------tg----r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (433)
T PRK00615 122 ATMTAVRLARGI-------TG----RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQI 190 (433)
T ss_pred HHHHHHHHHHHh-------hC----CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHH
Confidence 999999988653 12 345654 444555321 111111100 0 000 0 000000 137888
Q ss_pred HHHHhhh---CCeEEEEeeccCCcccccCH----HHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCc-cccCCC
Q 010897 195 AVELVDE---NTICVAAILGSTLTGEFEDV----KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLP 266 (498)
Q Consensus 195 L~~~i~~---~t~~v~~~~~~t~tG~~~~l----~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~-~~~~~~ 266 (498)
+++.+.. +..+|++--.....|.+.|. ++|.++|++| |+++++|+++.|+-. ..... ..+++
T Consensus 191 l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~R~---G~~ga~~~~gv- 260 (433)
T PRK00615 191 FQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT------GSLSIMDEVVTGFRV---AQGGAAAIYHV- 260 (433)
T ss_pred HHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcccccccc---cHhHHHHhcCC-
Confidence 9888853 33445444433444777664 5999999999 999999999976511 11000 01222
Q ss_pred CeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHH
Q 010897 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMEN 346 (498)
Q Consensus 267 ~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~ 346 (498)
..|.+++ -|.+.++..+|.++.+++ .. +.+... .+. ....| ++.+.....+..++|+.+..+. ..++
T Consensus 261 ~PDi~~~--gK~lggG~p~~av~~~~~-i~-~~~~~~-~~~---~~~~T--~~g~p~~~aa~la~L~~i~~~~---~~~~ 327 (433)
T PRK00615 261 KPDITVY--GKILGGGLPAAAVVAHKS-IM-DHLAPE-GTI---FQAGT--LSGNPLAMAAGKASINLCREQG---FYTQ 327 (433)
T ss_pred CCCeEEE--cccccCCcceeeeeecHH-HH-hhhcCC-CCc---ccCCC--CcccHHHHHHHHHHHHHHhccc---HHHH
Confidence 2566553 566554455677766542 21 111100 000 00011 2223345666667777765543 3556
Q ss_pred HHHHHHHHHHHHh----cCCCeEEeeCCCCccEEEEEecCCCC--C---------CHHHHHHHHHhcCcEeeeecCCCCC
Q 010897 347 CMGNARALREGLE----KTGRFEILSKDVGVPLVAFSLKDSSA--H---------TVFEISEGLRKFGWIVPAYTMPANA 411 (498)
Q Consensus 347 ~~~~a~~l~~~L~----~~~~~~~~~~~~~~~~v~f~~~~~~~--~---------~~~~l~~~L~~~G~~v~~~~~~~~~ 411 (498)
..++.++|.+.|+ +.+ +.+.... ...++.+.+..... + ....+...|.++|+.+.....+.
T Consensus 328 ~~~~g~~l~~~l~~~~~~~g-~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-- 403 (433)
T PRK00615 328 LSTLEQNFLSPIEEMIRSQG-FPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA-- 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc--
Confidence 6666666655554 332 3222111 22344454432110 0 12478889999998764322211
Q ss_pred CCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 412 ENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 412 ~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
..++..+|++++|+++++++++++.+-
T Consensus 404 -------~~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 404 -------SFLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred -------cceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 134456699999999999999987653
No 352
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.25 E-value=2.4e-08 Score=103.79 Aligned_cols=346 Identities=10% Similarity=0.061 Sum_probs=189.5
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+++ -.+.+|.+.+++.+.++....... .....+...++.+.|++++..+... .....++++|||
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~--~~~~f~~~sGsE 113 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT-LDLTTPLKDAFIEALLNIIPKRKMD--YKLQFPGPSGAD 113 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc-cccCcHHHHHHHHHHHHhCCCcCCC--ccEEEeCCCHHH
Confidence 466554444332 124468888989888876332111 1112334446667788876422100 112444689999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCcccc-----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVM----- 190 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~----- 190 (498)
|+..|++.++.. .| +++|+. ....|....-+....|. .+..+|... .++.
T Consensus 114 A~e~AlklAr~~-------tg----r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 181 (442)
T TIGR00709 114 AVEAAIKLAKTY-------TG----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH-EYRCPFGIG 181 (442)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc-cccccccCC
Confidence 999999988753 12 345654 44566655444443331 133333321 1221
Q ss_pred ---CH----HHHHHHhh------hCCeEEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 191 ---NP----VKAVELVD------ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 191 ---d~----~~L~~~i~------~~t~~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
+. +.+++.++ +++.+|++.......|.+. =+++|.++|++| |++++.|+++.||.-
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR- 254 (442)
T TIGR00709 182 GEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH------DIKLILDEVQAGFGR- 254 (442)
T ss_pred chhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC-
Confidence 11 12344443 2345565554444445552 478899999999 999999999987631
Q ss_pred ccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-... .+++ ..|.+++ -|.+.++..+|+++.+++ + ..+ ..... ..| ++-+.....+..++|
T Consensus 255 -tG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~--~~~~~-----~~T--~~gnpla~aaa~a~L 318 (442)
T TIGR00709 255 -SGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAW--QPAGH-----TGT--FRGNQLAMVTGTEAL 318 (442)
T ss_pred -CCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hcc--CCCcC-----CCC--CCcCHHHHHHHHHHH
Confidence 1110000 1222 2576664 566555678899987653 2 111 11111 111 223234455555666
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCCC-------C--C---HHHHHHHHHhc
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSA-------H--T---VFEISEGLRKF 398 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~-------~--~---~~~l~~~L~~~ 398 (498)
+.+.+++ ..++..++.++|.+.|+++- .+.++.... ..-++.+.+..+.. . + ...+...+.++
T Consensus 319 ~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (442)
T TIGR00709 319 NYWKDDN---LAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN 395 (442)
T ss_pred HHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC
Confidence 6555443 44566667777777776531 122222211 23345555532110 0 1 34677888899
Q ss_pred CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 399 GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 399 G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
|+++... .....++|+.....+|+++++++++.+++++.++
T Consensus 396 Gvl~~~~-----~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 396 GLLLETG-----GREGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred CeEEeec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9876321 1224679998877889999999999999998765
No 353
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=8.3e-09 Score=107.19 Aligned_cols=336 Identities=12% Similarity=0.045 Sum_probs=182.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.. -.+.+|.+.+++.+.++..... . ...+.+.++.+.|.++++++ ...++++|||
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~--~--~~~~~~~~lAe~l~~~~~~~-------~v~F~nSGtE 141 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT--M--LPSEDAAWVGEELARRFGLP-------YWQVATTATD 141 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC--C--CCCHHHHHHHHHHHHHhCCC-------EEEEECCHHH
Confidence 566654433322 2234688889998888764321 1 12355567778888887643 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHH-c-----------CCeeEEEE--ecCCccccCHH
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARY-F-----------EVELKEVK--LEEGYYVMNPV 193 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~-~-----------g~~~~~v~--~~~~~~~~d~~ 193 (498)
|++.|++.++.. .| +++|+. ....|......... . |.. ..+. +..-.| -|++
T Consensus 142 A~e~AlrlAR~~-------TG----r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-nd~~ 208 (453)
T PRK07046 142 ANRFVLRWARAV-------TG----RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQV-HDLTATTRVVEF-NDLA 208 (453)
T ss_pred HHHHHHHHHHHh-------hC----CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCC-ccccCceEeeCC-CCHH
Confidence 999999998753 12 355654 44556543221111 0 110 0000 000012 3789
Q ss_pred HHHHHhhh-CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCe
Q 010897 194 KAVELVDE-NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLV 268 (498)
Q Consensus 194 ~L~~~i~~-~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~ 268 (498)
.+++.+.. +..+|++--.....|.+.| ++++.++|+++ |+++++|+++. |-..+.. ....+++ ..
T Consensus 209 ~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~------g~llI~DEV~t-fr~g~Gg--~~~~~gv-~P 278 (453)
T PRK07046 209 ALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY------GTLLVIDETHT-ISSGPGG--YTRAHGL-EP 278 (453)
T ss_pred HHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEcccc-CccCCcc--hhHHhCC-Cc
Confidence 99998864 3444544433333355544 78999999999 99999999985 2111111 0111222 25
Q ss_pred eEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccc-cCccCCC-CCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHH
Q 010897 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSD-QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMEN 346 (498)
Q Consensus 269 dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~-~~yl~~~-~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~ 346 (498)
|.+++ -|.+.++..+|.++.++. .. +.+... .....+. ....| ++-+.....+..+.|+.+..+. ..++
T Consensus 279 Di~t~--gK~lggG~Pi~av~g~~~-i~-~~~~~~~~~~~~~~~~~~~T--~~gnpl~~aa~~a~L~~l~~~~---~~~~ 349 (453)
T PRK07046 279 DFLVV--GKPIAGGVPCAVYGFSAE-LA-ERAQAAKASAPPGHSGIGTT--LSANALAMAAMRATLAEVMTEA---AYAH 349 (453)
T ss_pred cceee--hhhhcCCCcceeeeehHH-HH-HHHhhccccCCCCCceeCCC--CcccHHHHHHHHHHHHHHhccc---HHHH
Confidence 66654 566666677888876542 21 111100 0000000 00112 2233345566666666664433 3455
Q ss_pred HHHHHHHHHHHHh----cCCC-eEEeeCCCCccEEEEEecCCCC---------CC---HHHHHHHHHhcCcEeeeecCCC
Q 010897 347 CMGNARALREGLE----KTGR-FEILSKDVGVPLVAFSLKDSSA---------HT---VFEISEGLRKFGWIVPAYTMPA 409 (498)
Q Consensus 347 ~~~~a~~l~~~L~----~~~~-~~~~~~~~~~~~v~f~~~~~~~---------~~---~~~l~~~L~~~G~~v~~~~~~~ 409 (498)
..++.++|.+.|+ +.+- ..+... +. ++.+.+.+... .+ ...+...|.++|+++.. .
T Consensus 350 ~~~~g~~l~~~L~~l~~~~~~~~~v~g~--G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~ 422 (453)
T PRK07046 350 MLALAARLAAGLRAVIARHGLPWHVTRV--GA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----F 422 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEe--Cc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----c
Confidence 5555666655554 3431 223222 22 33333321110 12 23567788899987632 1
Q ss_pred CCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 410 NAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 410 ~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
...++++ ..+|.++++++++.++++++++
T Consensus 423 ----~~~~~~~--p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 423 ----HNMMLVC--PATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred ----cCcEEEe--CCCCHHHHHHHHHHHHHHHHHH
Confidence 1236666 4579999999999999998765
No 354
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.24 E-value=6.8e-09 Score=107.47 Aligned_cols=333 Identities=14% Similarity=0.080 Sum_probs=169.9
Q ss_pred CChHHHH--HHHHHHhccCCC-CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECD--KLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~--~~l~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
+.+|.+. +++.+.+++... .+...........++.+.|+++...+ + .....++++||||+..|++.++.-..+
T Consensus 54 h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~---~~~v~f~~sGsEAve~AlklAr~~t~~ 129 (431)
T TIGR03251 54 MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDP-A---LPHLFFIEGGALAVENALKTAFDWKSR 129 (431)
T ss_pred CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCC-C---cCEEEEeCCcHHHHHHHHHHHHHHhhc
Confidence 3457776 777777665321 11110011112224445566664211 1 124899999999999999998753211
Q ss_pred HHHhcCCCC-CCcEEEE-cCCchhHHHHHHHHcCCe-eE----------EEE-------ecCCcc-------ccCHHHHH
Q 010897 144 KRKEQGKPY-DKPNIVT-GANVQVCWEKFARYFEVE-LK----------EVK-------LEEGYY-------VMNPVKAV 196 (498)
Q Consensus 144 ~~~~~g~~~-~~~~Iv~-s~~~h~~~~~~~~~~g~~-~~----------~v~-------~~~~~~-------~~d~~~L~ 196 (498)
..+..|.+. ++.+|+. ....|....-+....|.. .. .++ .+.+.. .-+++.++
T Consensus 130 ~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~ 209 (431)
T TIGR03251 130 HNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQAR 209 (431)
T ss_pred chhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHH
Confidence 111123211 1234554 445665544443333321 00 011 000000 01344556
Q ss_pred HHhh---hCCeEEEEeeccCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCe
Q 010897 197 ELVD---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLV 268 (498)
Q Consensus 197 ~~i~---~~t~~v~~~~~~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~ 268 (498)
+.+. +++.+|++.-.....|.+ +.+++|.++|++| |+++++|+++.|+-. ...-... .+++ ..
T Consensus 210 ~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Gr--tG~~~a~~~~gv-~P 280 (431)
T TIGR03251 210 AAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH------DALLIFDEVQTGVGL--TGTAWAYQQLGV-QP 280 (431)
T ss_pred HHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhccCc--cchHHHHHhcCC-CC
Confidence 6664 356667666554445655 4689999999999 999999999987532 1100001 1122 36
Q ss_pred eEEEEcCCccCCCCCCeEEEEEeCCC-CCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHH
Q 010897 269 KSINVSGHKYGLVYAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENC 347 (498)
Q Consensus 269 dsi~~s~hK~l~~p~g~g~~~~~~~~-~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~ 347 (498)
|.++++ |.+ +.+|++. +.+- .+.... + ..... ...| ++-+.....+..++|..+..+++ .++.
T Consensus 281 Di~~~g--K~~---~~~g~~~-~~~i~~~~~~~-~--~~~~~--~~~T--~~gnpl~~aaa~a~L~~l~~~~l---~~~~ 344 (431)
T TIGR03251 281 DIVAFG--KKT---QVCGIMA-GRRVDEVADNV-F--AVPSR--LNST--WGGNLVDMVRATRILEIIEEERL---VDNA 344 (431)
T ss_pred CEEEec--ccC---ccceEEe-cchHHHhhhhc-c--cCccc--cCCC--CCCCHHHHHHHHHHHHHHHhcCH---HHHH
Confidence 777654 322 2344443 3220 110000 0 00000 1112 22223455666677777655543 3344
Q ss_pred HHHHHHHHHHHhc----CCCeEEeeCCC-CccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 348 MGNARALREGLEK----TGRFEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 348 ~~~a~~l~~~L~~----~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
.++.++|.+.|++ .++ ++.... ...++.+.+++. .....+.+.|.++|+++.. .+...+|++..
T Consensus 345 ~~~g~~l~~~L~~l~~~~~~--~i~~vrg~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~-------~g~~~lr~~P~ 413 (431)
T TIGR03251 345 RVQGAHLLARLHELAAEFPH--LVSNPRGRGLMCAFDLPST--ADRDEVIRQLYREGVLLLG-------CGERSIRFRPP 413 (431)
T ss_pred HHHHHHHHHHHHHHHHhCcc--ceecccccceeEEEEeCCH--HHHHHHHHHHHhCCeEEec-------CCCCeEEEECC
Confidence 4555555555544 332 222211 234556676431 1245788999999987632 12346899988
Q ss_pred CCCCHHHHHHHHHHHHH
Q 010897 423 EDFSRSLVERLISHIEE 439 (498)
Q Consensus 423 ~~~t~~~~~~l~~~l~~ 439 (498)
..+|.++++++++.|++
T Consensus 414 l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 414 LTVTREEIDAAIDAIRR 430 (431)
T ss_pred ccCCHHHHHHHHHHHHh
Confidence 88899999988888765
No 355
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=8.1e-09 Score=106.59 Aligned_cols=350 Identities=11% Similarity=-0.010 Sum_probs=191.3
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++....... ....+.+.++.+.|++++..+. ....++++|+|
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGse 115 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFG-GFTHEPAVELAQKLLEILPPSL-----NKIFFADSGSV 115 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCchH
Confidence 566554433321 1244688888888888764321111 1112333456666777663211 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecCCc----c-c
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGY----Y-V 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~----~-~ 189 (498)
|+-.|++.++..+.. + |.+ ++.+|+. ....|....-+....|- .+..+|..... + .
T Consensus 116 Ave~AlklAr~~~~~-~---g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 190 (429)
T PRK06173 116 AVEVAMKMALQYQQA-K---GEV-QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWND 190 (429)
T ss_pred HHHHHHHHHHHHHHH-h---CCC-CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHH
Confidence 999999998764321 1 211 2345554 44455532222221110 12233321100 0 1
Q ss_pred cCHHHHHHHhhh---CCeEEEEeec-cCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc
Q 010897 190 MNPVKAVELVDE---NTICVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (498)
Q Consensus 190 ~d~~~L~~~i~~---~t~~v~~~~~-~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~ 261 (498)
-+++.|++.+.. +..+|++--. ....|.+ +=+++|.++|++| |+++++|+++.|+-- ...-...
T Consensus 191 ~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~ 262 (429)
T PRK06173 191 EAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY------GVLLIFDEIATGFGR--TGKLFAL 262 (429)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc------CCeEEecchhcCCCc--CCcchHH
Confidence 246677788752 3444444322 3333544 2368899999999 999999999966421 1110000
Q ss_pred -ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH
Q 010897 262 -DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG 339 (498)
Q Consensus 262 -~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g 339 (498)
.+++ ..|.+++ -|.+.++ ..++.++.+++ .. +.+. ...-.......| +.-+...+.+..++|+.+.++.
T Consensus 263 ~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~-i~-~~~~--~~~~~~~~~~~T--~~g~p~~~aaa~a~l~~i~~~~ 333 (429)
T PRK06173 263 EHAGV-VPDIMCI--GKALTGGYLTLSATITTEA-IA-QTIC--SGEAKCFMHGPT--FMANPLACAIAAESIRLLLESP 333 (429)
T ss_pred HhcCC-CCCEEEe--ehhhhCCccccceEEecHH-HH-HHHh--cCCCCccccCCC--CCcCHHHHHHHHHHHHHHHhCC
Confidence 1222 2566663 5555444 34566665542 11 1111 000000000111 1223356666677777765543
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeeCC-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEE
Q 010897 340 YKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLR 418 (498)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lR 418 (498)
..++..++.++|.+.|+++.++..+..- ....++.+.+.++ .+...+.+.|.++|+.+... + .++|
T Consensus 334 ---~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~--~~~~~i~~~l~e~Gi~v~~~-------g-~~l~ 400 (429)
T PRK06173 334 ---WQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP--VNMATLQPRFVEHGIWVRPF-------G-KLVY 400 (429)
T ss_pred ---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc--ccHHHHHHHHHHCCeEEEec-------C-CEEE
Confidence 4667777888888888765323323221 1345666766432 34568999999999886431 1 4689
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 419 VVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 419 v~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+.--..+|.++++++++.|++++..
T Consensus 401 ~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 401 IMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred EeCCccCCHHHHHHHHHHHHHHHHH
Confidence 8876678999999999999999865
No 356
>PRK07483 hypothetical protein; Provisional
Probab=99.24 E-value=2.8e-08 Score=103.16 Aligned_cols=345 Identities=11% Similarity=0.036 Sum_probs=184.0
Q ss_pred CChHHHHHHHHHHhccCCC-CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
+.+|.+.+++.+.+++..+ ....+ ..+...++.+.|++++.... ....++++||||+..|++.++..+..
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-- 116 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSFF--TTEPAEALADRLVAAAPAGL-----EHVYFVSGGSEAVEAALKLARQYFVE-- 116 (443)
T ss_pred CCCHHHHHHHHHHHHhccCcccccc--CCHHHHHHHHHHHHhCCCCC-----CEEEEcCCcHHHHHHHHHHHHHHHHh--
Confidence 3468888888888876432 11111 12334466677777763211 24899999999999999998754321
Q ss_pred HhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCcccc-------------CHHHHHHHh
Q 010897 146 KEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVM-------------NPVKAVELV 199 (498)
Q Consensus 146 ~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~~-------------d~~~L~~~i 199 (498)
.|.+ ++.+|+. ....|....-+....|- .+..++... .|+. .++.+++++
T Consensus 117 --~g~~-~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (443)
T PRK07483 117 --IGQP-QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY-AYREQRAGESDEAYGQRLADELEAKI 192 (443)
T ss_pred --cCCC-CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc-cccccccCCCHHHHHHHHHHHHHHHH
Confidence 1211 2456665 45566544333332221 123333211 1111 025666666
Q ss_pred h----hCCeEEEEeeccCC--cccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCe
Q 010897 200 D----ENTICVAAILGSTL--TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLV 268 (498)
Q Consensus 200 ~----~~t~~v~~~~~~t~--tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~ 268 (498)
. ++..+|++ -|--. -|.+.| +++|.++|++| |+++++|+++.|+-- ...-..+ .+++ ..
T Consensus 193 ~~~~~~~iAAviv-EPiqg~~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGfGR--tG~~~a~~~~gv-~P 262 (443)
T PRK07483 193 LELGPDTVAAFVA-ETVVGATAGAVPPVPGYFKRIREVCDRY------GVLLILDEVMCGMGR--TGTLFACEEDGV-AP 262 (443)
T ss_pred HhcCCCceEEEEE-eCcccCcCCeEeCCHHHHHHHHHHHHHh------CCEEEEecceeCccc--CcHHHHHhhcCC-CC
Confidence 4 23344444 34332 255544 88999999999 999999999987621 1100000 1122 25
Q ss_pred eEEEEcCCccCCCCC-CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHH
Q 010897 269 KSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENC 347 (498)
Q Consensus 269 dsi~~s~hK~l~~p~-g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~ 347 (498)
|.+++ -|.+.++. .+|.++.+++ .. +.+.....++. ...| ++-+.....+..+.|+.+.+++ ..++.
T Consensus 263 Div~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~---h~~T--~~gnpl~~aaa~a~l~~i~~~~---l~~~~ 330 (443)
T PRK07483 263 DLVTI--AKGLGAGYQPIGAVLASDR-IY-DAIADGSGFFQ---HGHT--YLGHATACAAALAVQRVIAEDG---LLANV 330 (443)
T ss_pred Ceeee--hhhhccCccccEEEEEcHH-HH-HHHhcCCCccc---cCCC--CCCCHHHHHHHHHHHHHHHhcC---HHHHH
Confidence 66665 45555553 6788887653 11 11110000000 0112 2222345556666666665544 45556
Q ss_pred HHHHHHHHHHHhcC-CCeEEeeCCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCcEeeeecCCCCCCCeeE
Q 010897 348 MGNARALREGLEKT-GRFEILSKDV-GVPLVAFSLKDSS----AHT-----VFEISEGLRKFGWIVPAYTMPANAENVAV 416 (498)
Q Consensus 348 ~~~a~~l~~~L~~~-~~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~G~~v~~~~~~~~~~~~~~ 416 (498)
.++.++|.+.|+++ ....++..-. ..-++.+.+..+. ..+ ...+.+.+.++|+++.............+
T Consensus 331 ~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~ 410 (443)
T PRK07483 331 RARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDH 410 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCE
Confidence 66666776666542 1121221111 2234455542211 011 24688889999988743211000111357
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 417 LRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 417 lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
+|+.--..+|.+++|++++.|+++++++..
T Consensus 411 l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 411 VLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 998866678999999999999999987643
No 357
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=1.1e-08 Score=106.33 Aligned_cols=354 Identities=11% Similarity=0.002 Sum_probs=191.6
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.++. -.+.+|.+.+++.+.+++....... ....+...++.+.|+++++.+. ....++++|||
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGse 125 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-GCTHEPAIELAERLAALTGGTL-----GHAFFASDGAS 125 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCCHH
Confidence 566655444432 2245688889998888764321111 1112333456667777765321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCcc-------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYY------- 188 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~------- 188 (498)
|+..|++.++..+.. + |.. ++.+|+. ....|....-+....|- .+..+|......
T Consensus 126 Ave~AlKlA~~~~~~-r---g~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 200 (453)
T PRK06943 126 AVEIALKMSFHAWRN-R---GRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETA 200 (453)
T ss_pred HHHHHHHHHHHHHHH-h---CCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCH
Confidence 999999998765432 1 211 2355655 44455543322222221 123333221000
Q ss_pred ----ccCHHHHHHHhh---hCCeEEEEee-ccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccC
Q 010897 189 ----VMNPVKAVELVD---ENTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (498)
Q Consensus 189 ----~~d~~~L~~~i~---~~t~~v~~~~-~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~ 256 (498)
.-|++.+++.++ ++..+|++-- .....|.+. =++++.++|++| |+++++|+++.|+-- ..
T Consensus 201 ~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~------gillI~DEV~TG~GR--tG 272 (453)
T PRK06943 201 ADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY------GVHLIADEIAVGCGR--TG 272 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCC--Cc
Confidence 113467777775 2344554432 134445543 378899999999 999999999977621 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHH
Q 010897 257 PDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (498)
Q Consensus 257 ~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~ 334 (498)
.-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+..... -.......| ++-+.....+..+.|+.
T Consensus 273 ~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~-~~~~~~~~T--~~gnpl~~aaa~a~L~~ 344 (453)
T PRK06943 273 TFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA-IF-AAFYDDDV-TRGFLHSHS--YTGNPLACRAALATLDL 344 (453)
T ss_pred chhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHH-HH-HhhcccCc-cCCccCCCC--CCCCHHHHHHHHHHHHH
Confidence 10000 1122 2677766 4555444 46788887653 21 11110000 000001112 22233455566666766
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCCCC---HHHHHHHHHhcCcEeeeecCCCC
Q 010897 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSAHT---VFEISEGLRKFGWIVPAYTMPAN 410 (498)
Q Consensus 335 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~~~---~~~l~~~L~~~G~~v~~~~~~~~ 410 (498)
+.+++ ..++..++.++|.+.|+++.....+..-. ..-++.+.+..+...+ ...+.+++.++|+++...
T Consensus 345 i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----- 416 (453)
T PRK06943 345 FAEDD---VLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----- 416 (453)
T ss_pred HHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec-----
Confidence 65543 45566667777777776542111121111 2234555553211111 346888899999886421
Q ss_pred CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 411 AENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 411 ~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+ ..+|++.-..+|+++++++++.|+++++++
T Consensus 417 --g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 417 --G-TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred --C-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 358888656679999999999999999875
No 358
>PRK07480 putative aminotransferase; Validated
Probab=99.23 E-value=3e-08 Score=103.24 Aligned_cols=354 Identities=13% Similarity=0.026 Sum_probs=186.4
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++.......+......+.++.+.|++++..+. ....++++|||
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 122 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF-----NHVFFTNSGSE 122 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHH
Confidence 466554443321 123468888888888876432211111223444466777888764221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCCe------------eEEEEecCCccc----cC
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEVE------------LKEVKLEEGYYV----MN 191 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~~------------~~~v~~~~~~~~----~d 191 (498)
|+..|++.++..+.. .|.. ++.+|+. ....|....-+....|.. +..++... .++ .+
T Consensus 123 A~e~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 196 (456)
T PRK07480 123 ANDTVLRMVRHYWAL----KGKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPY-WFGEGGDMT 196 (456)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCc-ccccccCCC
Confidence 999999998764321 1211 1345654 344565433332222211 22222110 000 11
Q ss_pred --------HHHHHHHhh----hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 192 --------PVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 192 --------~~~L~~~i~----~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
++.|++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.||.- .
T Consensus 197 ~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--t 268 (456)
T PRK07480 197 PEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY------DILLVADEVICGFGR--T 268 (456)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--C
Confidence 256665553 23445555443333466655 89999999999 999999999977621 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+..... ......| ++-++....+..++|+
T Consensus 269 G~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~---~~~~~~T--~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 269 GEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR-VA-EVLIEEGG---EFNHGFT--YSGHPVAAAVALANLR 338 (456)
T ss_pred cchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH-HH-HHHhcCCC---CcccCCC--CCcCHHHHHHHHHHHH
Confidence 110000 1122 2566554 4554443 35777776542 21 21100000 0011122 2233356666777777
Q ss_pred HhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCC----CC-C----HHHHHHHHHhcCcEe
Q 010897 334 RLGFEGYKNIMENC-MGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSS----AH-T----VFEISEGLRKFGWIV 402 (498)
Q Consensus 334 ~lg~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~-~----~~~l~~~L~~~G~~v 402 (498)
.+.++++ .++. .++.++|.+.|+++....++..-. ..-++.+.+..+. .. + ...+.+.+.++|+++
T Consensus 339 ~l~~~~l---~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 415 (456)
T PRK07480 339 ILRDEGI---VERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIM 415 (456)
T ss_pred HHHhCCH---HHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEE
Confidence 7765543 3444 345555555555432111111111 2234445552211 01 1 246777889999886
Q ss_pred eeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 403 PAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 403 ~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
.. . ...+|++....+|.+++|++++.|+++++++++
T Consensus 416 ~~-------~-~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 416 RA-------V-GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred ee-------c-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 32 1 135888765566999999999999999988743
No 359
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=4.5e-08 Score=102.09 Aligned_cols=354 Identities=12% Similarity=0.022 Sum_probs=193.1
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++-..... .....+...++.+.|++++..+. ....++++|||
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsE 118 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL-AGFSHEPVIELSERLVKITPPGL-----SRCFYADNGSS 118 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHH
Confidence 566654443332 223468888888888876322111 11123444566777887763211 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcCC------------eeEEEEecCCcc-------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEGYY------- 188 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~------- 188 (498)
|+..|++.++..+..+ |.. ++.+|+ .....|....-+..+.|. .+..+|... .+
T Consensus 119 Ave~AlKlAr~~~~~~----g~t-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~-~~~~~~~~~ 192 (466)
T PRK07030 119 AIEVALKMSFHYWRNR----GKP-RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPD-CYLRPEGMS 192 (466)
T ss_pred HHHHHHHHHHHHHHHh----CCC-CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCC-ccccccCCC
Confidence 9999999987643221 211 234555 444566654444333332 123333211 01
Q ss_pred -----ccCHHHHHHHhhh---CCeEEEEee-ccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 189 -----VMNPVKAVELVDE---NTICVAAIL-GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 189 -----~~d~~~L~~~i~~---~t~~v~~~~-~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
.-+++.+++.+.. +..+|++-- .....|.+.+ +++|.++|+++ |+++++|+++.||-- .
T Consensus 193 ~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~TGfGR--t 264 (466)
T PRK07030 193 WEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY------GVHLIHDEIAVGFGR--T 264 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--c
Confidence 1135667777753 344454443 1333455533 78899999999 999999999977621 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.....-.+......| ++-+.....+..+.|+
T Consensus 265 G~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~~~~~~h~~T--~~gnpla~aaa~a~L~ 337 (466)
T PRK07030 265 GTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT-VY-QAFYDDYPTLRAFLHSHS--YTGNPLACAAALATLD 337 (466)
T ss_pred ccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHH-HH-HHHhcccccccccccCCC--CCCCHHHHHHHHHHHH
Confidence 110000 1122 2577766 4555555 36777776543 21 111000000000001111 2223345566666777
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCC----C--C---HHHHHHHHHhcCcEee
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA----H--T---VFEISEGLRKFGWIVP 403 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~--~---~~~l~~~L~~~G~~v~ 403 (498)
.+.++. ..++..++.++|.+.|+++.....+..-. ...++.+.+..+.. . + ...+.+++.++|+++.
T Consensus 338 ~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~ 414 (466)
T PRK07030 338 IFEQDN---VIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLR 414 (466)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEE
Confidence 665543 45667777778877776652222222111 23345555532110 0 1 2468888999998864
Q ss_pred eecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 404 AYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 404 ~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.. + ..+|+.....+|+++++.+++.++++++++
T Consensus 415 ~~-------g-~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 415 PL-------G-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ec-------C-CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 21 1 358887666789999999999999999887
No 360
>PRK06917 hypothetical protein; Provisional
Probab=99.21 E-value=5e-08 Score=101.35 Aligned_cols=359 Identities=11% Similarity=0.027 Sum_probs=191.1
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.+++....... ....+...++.+.|++++.... ....++++|||
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsE 102 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSPGDL-----NWSFFVNSGSE 102 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCChHH
Confidence 566654433321 2244788999999888874322111 1123444567777888764221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CchhHHHHHHHHcCCe------------eEEEEecCCccc------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYV------ 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g~~------------~~~v~~~~~~~~------ 189 (498)
|+..|++.++..+.. + |.. ++.+|+.-. ..|....-+....+.. +..++... .+.
T Consensus 103 Ave~AlklAr~~~~~-r---g~t-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 176 (447)
T PRK06917 103 ANETAMKIAIQHFQE-R---GIQ-GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPY-CYRCPVQKV 176 (447)
T ss_pred HHHHHHHHHHHHHHh-c---CCC-CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCc-ccccccCCC
Confidence 999999998765422 1 211 235565544 4555443333333211 12222111 011
Q ss_pred ------cCHHHHHHHhhh----CCeEEEEeeccCCc-ccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccc
Q 010897 190 ------MNPVKAVELVDE----NTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (498)
Q Consensus 190 ------~d~~~L~~~i~~----~t~~v~~~~~~t~t-G~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~ 254 (498)
-|++.+++.++. +..+|++--..... |.+.| +++|.++|+++ |+++++|+++.||--
T Consensus 177 ~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~------g~llI~DEv~tGfGR-- 248 (447)
T PRK06917 177 YPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY------DILFIADEVMTGLGR-- 248 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc------CCEEEEechhhCcCc--
Confidence 134567777753 34445444322222 34432 78899999999 999999999987521
Q ss_pred cCCCCcc-ccCCCCeeEEEEcCCccCCCCC-CeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 255 LYPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 255 ~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~-g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-... .+++ ..|.+++ -|.+.+++ .+|.++.+++ .. +.+......+. ...| ++-+.....+..+.|
T Consensus 249 tG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~~~~---~~~T--~~gnpl~~aaa~a~l 318 (447)
T PRK06917 249 TGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-VM-EPILRGSRSIM---SGHT--LSANPLSAATALAVL 318 (447)
T ss_pred ccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-HH-HHHhccCcccc---cccC--CCCCHHHHHHHHHHH
Confidence 1110000 1222 2566555 46655543 5777776542 21 11111100000 0111 222234566666777
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCC----CC-----CHHHHHHHHHhcCcE
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS----AH-----TVFEISEGLRKFGWI 401 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~----~~-----~~~~l~~~L~~~G~~ 401 (498)
+.+..++ ..++..++.++|.+.|+++- .+.++.... ...++.+.+..+. .. -...+.+.|.++|++
T Consensus 319 ~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 395 (447)
T PRK06917 319 EYMEKHN---LPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLL 395 (447)
T ss_pred HHHHHCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcE
Confidence 7665443 45666667777776666542 122222111 2234444442110 01 135678889999988
Q ss_pred eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 402 VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 402 v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
+............+.+|++....+|+++++++++.++++++.+
T Consensus 396 ~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 396 LYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 7432111111234678988655689999999999999999876
No 361
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.21 E-value=1e-08 Score=106.41 Aligned_cols=352 Identities=13% Similarity=0.056 Sum_probs=181.9
Q ss_pred cCCCCCcccccc----cCCChHHHHH--HHHHHhccCCC-CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecC
Q 010897 53 DGNPRLNLASFV----TTWMEPECDK--LVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~--~l~~~~~~n~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (498)
+|+..+.+.+.+ -.+.+|.+.+ ++.+.+.+-.. .........+...++.+.|+++.+ |.+. ....++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~---~~v~f~~S 118 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPEL---PHLFFVDG 118 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCC---CEEEEeCc
Confidence 455544433322 1234677877 77777654211 000001112233345555766653 2211 24899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEE-cCCchhHHHHHHHHcCCee-----------EEEEecCCcc----
Q 010897 126 SSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVT-GANVQVCWEKFARYFEVEL-----------KEVKLEEGYY---- 188 (498)
Q Consensus 126 ~sea~~la~~a~~~~~~~~~~~~g~~-~~~~~Iv~-s~~~h~~~~~~~~~~g~~~-----------~~v~~~~~~~---- 188 (498)
|+||+..|++.++..+...+...|.+ .++.+|+. ....|....-+....|... ..++...-.+
T Consensus 119 GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (443)
T PRK08297 119 GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPG 198 (443)
T ss_pred hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcc
Confidence 99999999999876432111112220 12345654 4456654444433333110 0111100000
Q ss_pred ----------ccCHHHHHHHhh---hCCeEEEEeeccCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCccccc
Q 010897 189 ----------VMNPVKAVELVD---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (498)
Q Consensus 189 ----------~~d~~~L~~~i~---~~t~~v~~~~~~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~ 251 (498)
.-|++.+++.+. +++.+|++--....-|.+ .-+++|.++|++| |+++++|+++.|+-
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tGfG 272 (443)
T PRK08297 199 EDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH------DALLIFDEVQTGVG 272 (443)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccC
Confidence 013455667775 345556554333334554 5688999999999 99999999998752
Q ss_pred ccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHH
Q 010897 252 APFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (498)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~ 330 (498)
- ...-..+ .+++ ..|.+++ -|.+ | .|.++.+++ . .... ...+-.......| ++-+.....+..+
T Consensus 273 R--tG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~-i-~~~~--~~~~~~~~~~~~T--~~gnpl~~aaa~a 337 (443)
T PRK08297 273 L--TGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRR-V-DEVE--DNVFAVSSRINST--WGGNLVDMVRARR 337 (443)
T ss_pred c--cchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchH-H-HHhh--hhhccCccccCCC--CCccHHHHHHHHH
Confidence 1 1000000 1122 3577665 4543 2 334444432 0 0000 0000000001112 2222244555556
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCe--EEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeee
Q 010897 331 QFIRLGFEGYKNIMENCMGNARALREGLEKT----GRF--EILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPA 404 (498)
Q Consensus 331 ~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~--~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~ 404 (498)
+|..+..+ +..++..++.++|.+.|+++ +.+ .+- . ...++.+.+.+. .....+.+.|.++|+++..
T Consensus 338 ~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g-~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~ 409 (443)
T PRK08297 338 ILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVR--G-RGLMCAFDLPTT--ADRDEVIRRLWEEGVLVLP 409 (443)
T ss_pred HHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--c-cceEEEEEecCH--HHHHHHHHHHHHCCEEEec
Confidence 66666554 34556666677776666553 322 121 1 345566666431 1245788999999987632
Q ss_pred ecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 405 YTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 405 ~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.+...+|++....+|+++++++++.|++++.++
T Consensus 410 -------~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 410 -------CGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred -------CCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 123468998777789999999999999988754
No 362
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=2.9e-08 Score=103.52 Aligned_cols=354 Identities=12% Similarity=0.041 Sum_probs=193.2
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.+ -.+.+|.+.+++.+.+++-...... ....+.+.++.+.|++++..+. ....++++|||
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 127 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-GLANVPSILLAEKLIEVVPEGL-----KKVFYSDSGAT 127 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 566655444432 1245788899998888763221111 1122344466777888764221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCchhHHHHHHHHcCC------------eeEEEEecCC-c--c----
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEG-Y--Y---- 188 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~------------~~~~v~~~~~-~--~---- 188 (498)
|+..|++.++..+.. + |.. ++.+|+ .....|....-+..+.|- .+..+|.... . +
T Consensus 128 Ave~AlklAr~~~~~-~---g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 202 (460)
T PRK06916 128 AVEIAIKMAFQYWQN-K---GKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDK 202 (460)
T ss_pred HHHHHHHHHHHHHHh-c---CCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCCh
Confidence 999999998764321 1 211 234555 455566655444443331 1233332110 0 0
Q ss_pred ----ccCHHHHHHHhh---hCCeEEEEee-ccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccC
Q 010897 189 ----VMNPVKAVELVD---ENTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (498)
Q Consensus 189 ----~~d~~~L~~~i~---~~t~~v~~~~-~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~ 256 (498)
.-+++.+++.++ ++..+|++-- .....|.+. =+++|.++|+++ |+++++|+++.|+-- ..
T Consensus 203 ~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~TG~GR--tG 274 (460)
T PRK06916 203 AEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY------NVLFITDEVATGFGR--TG 274 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCc--Cc
Confidence 123566777775 2344454432 133345542 268899999999 999999999977521 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCcc--CCCCCCccccCCCchHHHHHHHHHH
Q 010897 257 PDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYL--GSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 257 ~~~~~-~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl--~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
.-... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+ ...+. .......| ++-+.....+..+.|
T Consensus 275 ~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e-i~-~~~--~~~~~~~~~~~~~~T--~~gnpl~~aaa~a~l 345 (460)
T PRK06916 275 KMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE-IY-NAF--YGDYEEQKTFFHGHS--YTGNPLGCAVALANL 345 (460)
T ss_pred hhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH-HH-HHh--hccccccCccccCCC--CCCCHHHHHHHHHHH
Confidence 00000 1122 2566654 4554444 36777776643 21 111 11110 00001112 222334555666667
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCC------CC---HHHHHHHHHhcCcEe
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA------HT---VFEISEGLRKFGWIV 402 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~------~~---~~~l~~~L~~~G~~v 402 (498)
..+..++ ..++..++.++|.+.|+++....++.+.. ..-++.+.+..+.. .+ ...+...|.++|+++
T Consensus 346 ~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 422 (460)
T PRK06916 346 ELYEKTN---LIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLT 422 (460)
T ss_pred HHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEE
Confidence 6665544 45667777888888887653222222111 12344444432110 01 246888899999886
Q ss_pred eeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 403 PAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 403 ~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
... ...+|+.-...+|+++++++++.++++++.+.
T Consensus 423 ~~~--------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 423 RPL--------GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred Eec--------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 321 14688886667899999999999999997653
No 363
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=2.8e-08 Score=102.46 Aligned_cols=336 Identities=11% Similarity=-0.034 Sum_probs=183.2
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.+++-...... ....+...++.+.|++++..+. ....++++||||+..|++.++..+..
T Consensus 56 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 126 (422)
T PRK05630 56 HGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDNGL-----DHVFYSDSGSVSVEVAIKMALQYSKG--- 126 (422)
T ss_pred CCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 34688888888888763321111 0112333456666777763221 24899999999999999988764321
Q ss_pred hcCCCCCCcEEE-EcCCchhHHHHHHHHcCC-------------eeEEEEecCCccccC-------HHHHHHHhhhCCeE
Q 010897 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMN-------PVKAVELVDENTIC 205 (498)
Q Consensus 147 ~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~~d-------~~~L~~~i~~~t~~ 205 (498)
.|.+ ++.+|+ .....|....-+....+- .+..+|.... ...+ .+.+++.+.++..+
T Consensus 127 -~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~iAA 203 (422)
T PRK05630 127 -QGHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSPQEISEYLRSLELLIDETVAA 203 (422)
T ss_pred -cCCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCChHHHHHHHHHHHHHHhhceEE
Confidence 1211 234555 455566544333332221 1233333211 0111 23455556555555
Q ss_pred EEEeec-cCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcc-ccCCCCeeEEEEcCCccC
Q 010897 206 VAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYG 279 (498)
Q Consensus 206 v~~~~~-~t~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~-~~~~~~~dsi~~s~hK~l 279 (498)
|++.-. ....|.+ +.+++|.++|++| |+++++|+++.|+-. ...-... .+++ ..|.+++ -|.+
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv-~PDi~t~--gK~l 272 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKH------DILLIADEIATGFGR--TGELFATLAAGV-TPDIMCV--GKAL 272 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEecceeCCCc--CchhhHHHhcCC-CCCeeee--echh
Confidence 555431 3333443 4688999999999 999999999976521 1100000 1121 2466644 5666
Q ss_pred CCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010897 280 LVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (498)
Q Consensus 280 ~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 358 (498)
.++ ..+|+++.++. . .+.+..... -+......| ++-+...+.+..++|+.+.++. ..++..++.++|.+.|
T Consensus 273 ~gG~~p~~av~~~~~-i-~~~~~~~~~-~~~~~h~~T--~~g~Pla~aaa~aaL~~l~~~~---~~~~~~~~g~~l~~~L 344 (422)
T PRK05630 273 TGGFMSFAATLCTDK-V-AQLISTPNG-GGALMHGPT--FMANPLACAVAHASLEIIETGM---WRKQVKRIEAELIAGL 344 (422)
T ss_pred hcCccccceeeccHH-H-HHHHhccCC-CCccccCCC--CcCCHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHH
Confidence 443 35566665542 1 111110000 000000111 2233345566667777775543 3457777777887777
Q ss_pred hcCCCeEEeeCC-CCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHH
Q 010897 359 EKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHI 437 (498)
Q Consensus 359 ~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l 437 (498)
+++.....+.+- ....++.+.+..+ .+...+.+.+.++|+++... + .++|+.--..+|.+++|++++.|
T Consensus 345 ~~l~~~~~v~~vRg~Gl~~~ie~~~~--~~~~~~~~~~~~~Gl~~~~~-------g-~~l~~~PpL~it~~~i~~~~~~l 414 (422)
T PRK05630 345 SPLAHLPGVADVRVLGAIGVVEMEQP--VDMEEATQAAVDHGVWLRPF-------G-RLVYVMPPYITTSEQIAQICAAL 414 (422)
T ss_pred HHhhcCCCeeeeeccccEEEEEECCc--ccHHHHHHHHHHCCeEEEec-------C-CEEEEECCccCCHHHHHHHHHHH
Confidence 654221112211 1245666666432 23568889999999886431 2 46898876678999999999999
Q ss_pred HHHHHH
Q 010897 438 EEVLKE 443 (498)
Q Consensus 438 ~~~l~~ 443 (498)
+++++.
T Consensus 415 ~~al~~ 420 (422)
T PRK05630 415 AAAVKA 420 (422)
T ss_pred HHHHhc
Confidence 988853
No 364
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.21 E-value=2e-09 Score=100.59 Aligned_cols=310 Identities=14% Similarity=0.099 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE----cCCchhHHHHHH
Q 010897 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT----GANVQVCWEKFA 171 (498)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~----s~~~h~~~~~~~ 171 (498)
..+-+...++.+.|+...+ +.+.++-|.-+..-+..+.++.. + +-+|+. -...|++++.-|
T Consensus 112 ~De~il~l~~~iVGA~e~E-----vavmNsLTvNlh~Ll~sFyKPTe-k---------R~KILlE~kaFPSDhYAiesQ~ 176 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQENE-----VAVMNSLTVNLHSLLISFYKPTE-K---------RFKILLEKKAFPSDHYAIESQC 176 (465)
T ss_pred cchhhhhhhhhhccCCchh-----hhhHhhhhhHHHHHHHHhcCCcc-h---------hhhhhhccCCCCchHHHHHhhh
Confidence 3446777799999997632 44554444444334444433211 1 124554 235788999999
Q ss_pred HHcCCee----EEEEecCCccccCHHHHHHHhhhC---CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 172 RYFEVEL----KEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 172 ~~~g~~~----~~v~~~~~~~~~d~~~L~~~i~~~---t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
++.|+.+ +-+...++.-.+..+++.+.|..| ..+|+++....+||...|+.+|. .|.+.+ |+++-.|
T Consensus 177 ~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT-~Agq~k-----gc~VGfD 250 (465)
T KOG3846|consen 177 KLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAIT-FAGQFK-----GCLVGFD 250 (465)
T ss_pred hhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhh-hcccCC-----CcEechh
Confidence 9999873 444444544567788888888765 35567788889999999999999 455443 9999999
Q ss_pred cCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCC-eEEEEEeCCCCCCcccccccCccCCCCC-Cc--------
Q 010897 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQP-TF-------- 314 (498)
Q Consensus 245 ~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g-~g~~~~~~~~~l~~~~~~~~~yl~~~~~-~~-------- 314 (498)
-|++.+-.|+... | .++|+.++.+.||+.+++| +|.+++..+. ..+..+.-..|.+.+.. .|
T Consensus 251 LAHAvgNVpL~LH----d---WgVDFACWCSYKYlnaGaGgIgGlFvHekh-~~~~~prl~GWwgh~~s~RF~Mdnvl~l 322 (465)
T KOG3846|consen 251 LAHAVGNVPLQLH----D---WGVDFACWCSYKYLNAGAGGIGGLFVHEKH-TKESLPRLAGWWGHDPSKRFQMDNVLEL 322 (465)
T ss_pred hhhhhcCCceEEe----e---cCCceEEEeeecccccCCCccceeeeehhh-hcchhhHHhhhccCCcchhhhhcccccc
Confidence 9998765444221 2 2589999999999988776 5666665442 22333333445554311 01
Q ss_pred -----ccc-CCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------eEEeeCCC---Ccc
Q 010897 315 -----TLN-FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-----------FEILSKDV---GVP 374 (498)
Q Consensus 315 -----~l~-~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-----------~~~~~~~~---~~~ 374 (498)
++. ...+.....++..+|+.+..-.+.+...+..-+..||...|+..-+ |.++.+.. +..
T Consensus 323 ipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGc 402 (465)
T KOG3846|consen 323 IPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGC 402 (465)
T ss_pred CccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccc
Confidence 111 1222345577888888888777888888888888888777765432 34444321 222
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeec-CCCCHHHHHHHHHHHHHHHHHHH
Q 010897 375 LVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVR-EDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~-~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
..++.+. .+...+...|.++|++... ...+++|++-- -.++-.++-+++..|.++++.++
T Consensus 403 QLsl~Fs----sp~~~vfqeL~krGv~~Dk-------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 403 QLSLYFS----SPTPKVFQELHKRGVIGDK-------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred eEEEEeC----CCchHHHHHHHHcCeeccc-------cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 3333331 1335899999999987533 34567999853 35566788888888888887654
No 365
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.20 E-value=3e-08 Score=96.54 Aligned_cols=308 Identities=16% Similarity=0.108 Sum_probs=165.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHH--HHHHHHH--HHHhcCCCCCCcEEEEcCCchhHHHHHHHHc
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA--FKRKWQQ--KRKEQGKPYDKPNIVTGANVQVCWEKFARYF 174 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a--~~~~~~~--~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~ 174 (498)
++++.+++++|.+.++ +++...+|..+|.=+.+ +...... .++.. ..+.+.+||.|.|-.....++.+
T Consensus 73 e~r~l~a~llgv~~~~-----viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~---~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 73 EARELFAELLGVPPEN-----VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCK---EEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHTS-GGG-----EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGG---SS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHH-----EEEeccchHHHHHHHHHHHHhcCCCCCCCCchh---ccCceEEecCCCchHHHHHHHhh
Confidence 5667799999999742 55555555555543322 2111100 01110 12358899999999999999999
Q ss_pred CCeeEEEEecCCccccCHHHHHHHhhhC--CeEEEEe-eccCCcccccCHHHHHHHHH---HhhcccCCCceEEEecCcc
Q 010897 175 EVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAI-LGSTLTGEFEDVKLLHDLLT---KKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 175 g~~~~~v~~~~~~~~~d~~~L~~~i~~~--t~~v~~~-~~~t~tG~~~~l~~I~~la~---~~~~~~~~~~~l~vD~A~~ 248 (498)
|++.+.||++++ + .|+|.+++++.++ .++|++. .-+||||..-.=+-+..||. ..+ |.-|.-|.||+
T Consensus 145 Giemi~VpM~~d-G-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~-----DFRI~WDNAY~ 217 (425)
T PF12897_consen 145 GIEMIPVPMTED-G-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP-----DFRIFWDNAYA 217 (425)
T ss_dssp T-EEEEEEEETT-E-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST-----T-EEEEE-TTT
T ss_pred CcEEEecCCCCC-C-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc-----CeEEEeecCce
Confidence 999999999987 3 8999999999654 3666543 35788999955444444442 222 99999999998
Q ss_pred cccccccC--CCCc-cc-------cCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccC
Q 010897 249 GFIAPFLY--PDLE-WD-------FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (498)
Q Consensus 249 g~~~~~~~--~~~~-~~-------~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~ 318 (498)
...+ .. +... .+ -+-++-..+-.|..|.-+++.|++++..+... ..++... ++ .
T Consensus 218 vHhL--~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~N---------l~~~~~~---~~--~ 281 (425)
T PF12897_consen 218 VHHL--YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEAN---------LAWIKKH---LS--V 281 (425)
T ss_dssp T-BS--SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHH---------HHHHHHH---HH--H
T ss_pred Eeec--cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHH---------HHHHHHH---hc--C
Confidence 6643 11 1111 11 13556677778999998899999888754321 1111100 00 0
Q ss_pred CCchHHHHHHHHHHHHhcH-H-HHHHHHHHHHH--------HHHHHHHHHh-cCCCeEEeeCCCCccEEEEEecCCCCCC
Q 010897 319 SKGSSQIIAQYYQFIRLGF-E-GYKNIMENCMG--------NARALREGLE-KTGRFEILSKDVGVPLVAFSLKDSSAHT 387 (498)
Q Consensus 319 sr~~~~~~a~~~~l~~lg~-~-g~~~~~~~~~~--------~a~~l~~~L~-~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 387 (498)
..-+..-+.|..-.+.+++ + |.+++|+++.+ ..+.|.++|. ..+ +--...|.+.-||+|...+. .
T Consensus 282 ~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~-ia~Wt~P~GGYFIsld~~~G---~ 357 (425)
T PF12897_consen 282 QTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLG-IASWTKPKGGYFISLDVLDG---T 357 (425)
T ss_dssp H-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGT-SEEE---SBSS-EEEEESTT----
T ss_pred ceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCC-eeEecCCCCceEEEEecCCC---h
Confidence 0011334556666666654 5 88888888776 3344556665 443 44444555777999988542 6
Q ss_pred HHHHHHHHHhcCcEeee--ecCCCC-CCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 388 VFEISEGLRKFGWIVPA--YTMPAN-AENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 388 ~~~l~~~L~~~G~~v~~--~~~~~~-~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
..++.+...+.|+.+.. -++|.. -.....||++-+.. +.+|++.-.+.+-.|++
T Consensus 358 AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P-~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 358 AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYP-SLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCC-CHHHHHHHHHHHHHHHH
Confidence 78999999999987632 223321 12356799997644 56667655555555553
No 366
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.18 E-value=1.2e-07 Score=98.79 Aligned_cols=345 Identities=13% Similarity=0.087 Sum_probs=187.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCC-CCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeee-cCh
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGS 126 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~g~ 126 (498)
+||..+.+.+.+ -.+.+|.+.+++.+.+++.. .....+ ..+.+.++.+.|.+++..+.. ......++ ++|
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~--~~~~~~~la~~L~~~~p~~~~--~~~~v~f~~~SG 136 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDL--TTPVKDQFVQDLFASLPEAFA--REAKIQFCGPTG 136 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccccc--CCHHHHHHHHHHHHhCccccc--ccceEEEeCCCc
Confidence 466554433322 22346888888888886532 211111 123333455556665532110 00125565 699
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCccc----
Q 010897 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV---- 189 (498)
Q Consensus 127 sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~---- 189 (498)
|||+..|++.++.. .| +.+|+. ....|....-+....|- ++..+|.... ++
T Consensus 137 SEAve~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~ 204 (464)
T PRK06938 137 TDAVEAALKLVKTA-------TG----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYD-YRCPFG 204 (464)
T ss_pred HHHHHHHHHHHHHh-------hC----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcc-cccccc
Confidence 99999999998753 12 345654 44566544433333221 2344443211 11
Q ss_pred --------cCHHHHHHHhhh------CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccc
Q 010897 190 --------MNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (498)
Q Consensus 190 --------~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~ 251 (498)
.+++.+++.+.+ +..+|++--....-|.+.| ++++.++|+++ |+++++|+++.||-
T Consensus 205 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~------giLlI~DEV~tGfG 278 (464)
T PRK06938 205 LGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA------GIPLIVDEIQSGFG 278 (464)
T ss_pred CchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCC
Confidence 236678888863 2444544332222355433 78899999999 99999999998762
Q ss_pred ccccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHH
Q 010897 252 APFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (498)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~ 330 (498)
- ...-..+ .+++ ..|.+++ -|.+.++..+|.++.++. + +.+ ..... ..| ++-+.....+..+
T Consensus 279 R--tG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~--~-~~~--~~~~~-----~~T--~~gnpla~Aaa~a 341 (464)
T PRK06938 279 R--TGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW--L-DTW--QPGAH-----AGT--FRGNQMAMAAGSA 341 (464)
T ss_pred c--CcHHHHHHhcCC-CCCEEEe--eccccCCCceEEEeehhH--h-hcc--CCCCC-----CCC--CCcCHHHHHHHHH
Confidence 1 1100000 1222 2577766 466656677888887643 2 221 11111 112 2333355666667
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCCC---------CC---HHHHHHHHH
Q 010897 331 QFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSA---------HT---VFEISEGLR 396 (498)
Q Consensus 331 ~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~---------~~---~~~l~~~L~ 396 (498)
.|+.+.+++ ..++..++.++|.+.|+++- ...++..-. ..-++.+.+..+.. .+ ...+...+.
T Consensus 342 ~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (464)
T PRK06938 342 TLRYIKEHR---LAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL 418 (464)
T ss_pred HHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH
Confidence 777665554 44556666666666665531 111222211 22344555532110 01 246778889
Q ss_pred hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 397 KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 397 ~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
++|+++... .....++|+.-...+|+++++++++.+++++..+
T Consensus 419 ~~Gll~~~~-----g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 419 RRGLILELG-----GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred HCCeEEeec-----CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 999876321 1123579988666789999999999999998764
No 367
>PRK06149 hypothetical protein; Provisional
Probab=99.17 E-value=3.2e-08 Score=112.15 Aligned_cols=326 Identities=13% Similarity=0.051 Sum_probs=178.8
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+....... .+ ......++.+.|++++..+. ....++++||||+..|++.++..
T Consensus 600 ~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~elae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------- 664 (972)
T PRK06149 600 GHPRLAAAAARQWSLLNTNS-RF--HYAAVAEFSERLAALAPDGL-----DTVFLVNSGSEANDLAIRLAWAA------- 664 (972)
T ss_pred CCHHHHHHHHHHHHhccccc-cc--cCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHh-------
Confidence 46888888888776533211 11 12344456666888772211 23899999999999999988653
Q ss_pred cCCCCCCcEEE-EcCCchhHHHHHHHHcCC-------------eeEEEEecCCccc-----cC-----HHHHHHHhh---
Q 010897 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYV-----MN-----PVKAVELVD--- 200 (498)
Q Consensus 148 ~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----~d-----~~~L~~~i~--- 200 (498)
.| +..|| +....|....-+....+- .+..++... .++ .| .+++++.+.
T Consensus 665 tg----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 739 (972)
T PRK06149 665 SG----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPN-TYRGRFRGADSAADYVRDVVAQLEELD 739 (972)
T ss_pred cC----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCc-ccCCcCCCcccHHHHHHHHHHHHHHHh
Confidence 12 23454 444566433221111110 123333211 111 12 234443332
Q ss_pred ---hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc---cCCCCeeE
Q 010897 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD---FRLPLVKS 270 (498)
Q Consensus 201 ---~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~---~~~~~~ds 270 (498)
+++.+|++--.....|.+.| +++|.++|++| |+++++|+++.||-. .. ..-|- +++ ..|.
T Consensus 740 ~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~------g~llI~DEV~tGfGR--tG-~~~~a~e~~gv-~PDi 809 (972)
T PRK06149 740 ASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR------GGVCIADEVQVGYGR--LG-HYFWGFEQQGV-VPDI 809 (972)
T ss_pred hcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEEeehhcCCc--cC-ccchhhhhcCC-CCCE
Confidence 23445554433344577778 99999999999 999999999966521 11 10011 122 3577
Q ss_pred EEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010897 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (498)
Q Consensus 271 i~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~ 350 (498)
+++ -|.+.++..+|.++.+++ . .+.+... .++.+ | ++-+.....+..+.|+.+.+++ ..++..++
T Consensus 810 vt~--gK~lg~G~Pl~av~~~~~-i-~~~~~~~-~~~~s-----T--~~gnP~~~aaala~L~~i~~e~---l~~~~~~~ 874 (972)
T PRK06149 810 ITM--AKGMGNGHPLGAVITRRE-I-AEALEAE-GYFFS-----S--TGGSPVSCRIGMAVLDVLREEK---LQENARRV 874 (972)
T ss_pred EEe--cccccCCeeeEEEEEcHH-H-HhhhccC-CcccC-----C--CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 655 466655567888887653 2 1211110 11111 1 1222345555666676665553 45566666
Q ss_pred HHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCC-C--CCC---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeec
Q 010897 351 ARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDS-S--AHT---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVR 422 (498)
Q Consensus 351 a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~-~--~~~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~ 422 (498)
.++|.+.|+++. ...++..-. ..-++.+.+..+ . ..+ ...+.++|.++|+++... ....+++|+.--
T Consensus 875 G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~-----g~~~~vl~~~Pp 949 (972)
T PRK06149 875 GDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT-----GDHLNILKIKPP 949 (972)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec-----CCCCCEEEEECC
Confidence 677777776541 111221111 223445555211 0 011 357889999999886431 122467888755
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010897 423 EDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 423 ~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..+|+++++.+++.|++++.+
T Consensus 950 l~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 950 LCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CcCCHHHHHHHHHHHHHHHHh
Confidence 558999999999999999864
No 368
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=1.9e-07 Score=97.53 Aligned_cols=359 Identities=10% Similarity=-0.010 Sum_probs=186.1
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+|+..+.+.+.. -.+.+|.+.+++.+.++.-...... .-..+...++.+.|.+++.............++++|||
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSE 140 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSA 140 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchH
Confidence 456544433322 2244688888888877642221110 11123344666777777632100000124899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHHHHcCC------------eeEEEEecCCccc------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV------ 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~------------~~~~v~~~~~~~~------ 189 (498)
|+..|++.++..+.. + |.. ++.+|+. ....|....-+....|. .+..+|... .++
T Consensus 141 AvE~AlKlAr~~~~~-~---g~~-~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~-~~~~~~~~~ 214 (472)
T PRK08742 141 GVEVALKMAFHYFHN-R---GEH-RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPD-AYLAEPGQS 214 (472)
T ss_pred HHHHHHHHHHHHHHh-c---CCC-CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCC-ccccccCCC
Confidence 999999998764322 1 211 1345554 44556544333333221 123333211 111
Q ss_pred ------cCHHHHHHHhhh---CCeEEEEee-ccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 190 ------MNPVKAVELVDE---NTICVAAIL-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 190 ------~d~~~L~~~i~~---~t~~v~~~~-~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
-+++.+++.++. +..+|++-- .....|.+. =++++.++|+++ |+++++|+++.||-- .
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~------gillI~DEV~TGfGR--t 286 (472)
T PRK08742 215 AEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH------GAFLIADEIATGFGR--T 286 (472)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--C
Confidence 135677777752 344444432 133345542 368899999999 999999999987631 1
Q ss_pred CCCCccc-cCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-.... +++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+..... -+......| ++-+.....+..+.|.
T Consensus 287 G~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e-i~-~~~~~~~~-~~~~~h~~T--~~gnpl~~Aaa~a~L~ 358 (472)
T PRK08742 287 GTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ-LY-DAFLDDSR-ERAFLHSHS--YTGNPLACAAALATLD 358 (472)
T ss_pred ccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH-HH-HHhhccCc-cCccCcCCC--CCccHHHHHHHHHHHH
Confidence 1100001 122 2577666 4555444 35777776543 11 11110000 000001112 2223345566667777
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC-CccEEEEEecCCCC----CC-----HHHHHHHHHhcCcEee
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA----HT-----VFEISEGLRKFGWIVP 403 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~~-----~~~l~~~L~~~G~~v~ 403 (498)
.+.++++ .++..++.++|.+.++.+....++.+-. ..-++.+.+..+.. .+ ...+.+++.++|+++.
T Consensus 359 ~i~~~~l---~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 435 (472)
T PRK08742 359 IFADDDV---IARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLR 435 (472)
T ss_pred HHHHCCH---HHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEE
Confidence 7766554 3444445555554444332121222211 23345555532110 01 2467788899998864
Q ss_pred eecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 404 AYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 404 ~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
. .+ +++|+.--..+|+++++++++.|+++++++.
T Consensus 436 ~-------~g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 436 P-------LG-DVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred e-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 2 11 4699887667899999999999999998753
No 369
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.15 E-value=1.9e-08 Score=104.22 Aligned_cols=335 Identities=10% Similarity=0.042 Sum_probs=172.4
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.. -.+.+|.+.+++.+.++.... + .. ....+-++.+.|.+++... ....++++|||
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~-~~--~~~~~~~la~~l~~~~p~~------~~v~f~~sGse 115 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-F-TR--PSAIELDAAESFLELIDGA------DMVKFCKNGSD 115 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-C-CC--CCHHHHHHHHHHHHhCCcc------ceEEEecCHHH
Confidence 466554433322 223468888888888876432 1 11 2233335666677776311 13899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-C-Cchh---HHHHHHHH-cCCe--eEEEEecCCccccCHHHHHHHhh
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-A-NVQV---CWEKFARY-FEVE--LKEVKLEEGYYVMNPVKAVELVD 200 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s-~-~~h~---~~~~~~~~-~g~~--~~~v~~~~~~~~~d~~~L~~~i~ 200 (498)
|+..|++.++.. .| +..|+.. . ..|. .+.-.... .|.. ....+..- ..-|+++|+++++
T Consensus 116 A~e~AlklAr~~-------tg----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~d~~~l~~~l~ 182 (431)
T PRK06209 116 ATSAAVRLARAY-------TG----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--RYNDIASLEALFE 182 (431)
T ss_pred HHHHHHHHHHHH-------hC----CCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--CCCCHHHHHHHHH
Confidence 999999988653 12 3455543 1 2221 00000000 0110 00001100 0137899999886
Q ss_pred h--CCeEEEEeeccCC-cccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCc
Q 010897 201 E--NTICVAAILGSTL-TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (498)
Q Consensus 201 ~--~t~~v~~~~~~t~-tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK 277 (498)
. +..+.+++-|... .+....+++|.++|++| |+++++|+++.|+.. ...-....+++ ..|.+++ -|
T Consensus 183 ~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~------g~lLI~DEv~tG~~~--~~~g~~~~~gv-~PDi~t~--gK 251 (431)
T PRK06209 183 DHPGRIACVILEPATADEPQDGFLHEVRRLCHEN------GALFILDEMITGFRW--HMRGAQKLYGI-VPDLSCF--GK 251 (431)
T ss_pred hCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHc------CCEEEEEcccccCCc--CcchhhHHhCC-Ccceeee--hh
Confidence 3 2233333333221 23334599999999999 999999999977531 10001111222 2465443 56
Q ss_pred cCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCC--ccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010897 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPT--FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (498)
Q Consensus 278 ~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~--~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~ 355 (498)
.+.++..+|.++.++. .. +...+. ....... ++..++.+...+.+..++|+.+..++ ..++..++.++|.
T Consensus 252 ~lggG~p~~av~~~~~-i~-~~~~~~---~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~ 323 (431)
T PRK06209 252 ALGNGFAVSALAGKRE-YM-ELGGLE---HTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLA 323 (431)
T ss_pred hhcCCcccEEEEEHHH-HH-hhhccc---ccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHH
Confidence 6655555677776532 21 110000 0000011 11112333355666777777776554 3455555666666
Q ss_pred HHHhc----CCCeE--EeeCCCCccEEEEEecCC-CCCC--HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCC
Q 010897 356 EGLEK----TGRFE--ILSKDVGVPLVAFSLKDS-SAHT--VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFS 426 (498)
Q Consensus 356 ~~L~~----~~~~~--~~~~~~~~~~v~f~~~~~-~~~~--~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t 426 (498)
+.|++ .+ +. +-......+++.+...+. .... ...+.++|.++|++++ + ++++ ..+|
T Consensus 324 ~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p-----~-------l~is--~~ht 388 (431)
T PRK06209 324 AGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP-----S-------LVVS--YAHG 388 (431)
T ss_pred HHHHHHHHhCC-CCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc-----c-------cccc--ccCC
Confidence 66544 44 22 111111122222211111 0111 1267788999998642 1 3444 5679
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010897 427 RSLVERLISHIEEVLKEI 444 (498)
Q Consensus 427 ~~~~~~l~~~l~~~l~~l 444 (498)
.++++++++.+++++..+
T Consensus 389 ~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 389 DADIERTIDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999887
No 370
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.13 E-value=2.1e-07 Score=97.01 Aligned_cols=347 Identities=12% Similarity=0.078 Sum_probs=184.7
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhH
Q 010897 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (498)
Q Consensus 53 ~~~p~~~~~~~~----~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~se 128 (498)
+||..+.+.+.+ -.+.+|++.+++.+.+.+...... .....+.+.++.+.|.+++...... .....++++|||
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~--~~~~f~~~SGsE 132 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGKE--YCLQFTGPSGAD 132 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCcccc--ceEEEeCCCcHH
Confidence 566654444432 223468888888888775321111 1122345556777788876422100 012355589999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CchhHHHHHHHHcC------------CeeEEEEecCCccc------
Q 010897 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEGYYV------ 189 (498)
Q Consensus 129 a~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g------------~~~~~v~~~~~~~~------ 189 (498)
|+..|++.++.. .| +++|+.-. ..|....-+....+ .++..+|... .++
T Consensus 133 Ave~AlklAr~~-------tg----r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 200 (459)
T PRK06931 133 AVEAAIKLAKTY-------TG----RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPH-EYRCPLGIG 200 (459)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCc-cccccccCC
Confidence 999999988753 12 35666544 45554443333222 1233444321 111
Q ss_pred --cCHHHH----HHHhhh------CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccc
Q 010897 190 --MNPVKA----VELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (498)
Q Consensus 190 --~d~~~L----~~~i~~------~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~ 253 (498)
-+.+.+ ++.+++ +..+|++--.....|.+.| ++++.++|+++ |+++++|+++.||.-
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~LlI~DEV~tGfGR- 273 (459)
T PRK06931 201 GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH------GILLIVDEVQAGFAR- 273 (459)
T ss_pred chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhcCCc-
Confidence 123333 333332 2345554333333354433 78899999999 999999999987621
Q ss_pred ccCCCCcc-ccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHH
Q 010897 254 FLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (498)
Q Consensus 254 ~~~~~~~~-~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l 332 (498)
...-..+ .+++ ..|.+++ -|.+.++..+|.++.++. + +.+ ..... ..| ++-+.....+..+.|
T Consensus 274 -tG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~--~~~~~-----~~T--~~gnpla~aaala~L 337 (459)
T PRK06931 274 -TGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAW--QPGGH-----TGT--FRGNQLAMATGLTTL 337 (459)
T ss_pred -CchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhc--cCCCC-----CCC--CCCCHHHHHHHHHHH
Confidence 1100000 1122 2576666 455555566777765532 2 221 11111 112 233335556666777
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCCC---------CC---HHHHHHHHHhc
Q 010897 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSA---------HT---VFEISEGLRKF 398 (498)
Q Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~---------~~---~~~l~~~L~~~ 398 (498)
+.+..++ ..++..++.++|.+.|+++- ...++..-. ...++.+.+..+.. .+ ...+...+.++
T Consensus 338 ~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (459)
T PRK06931 338 KILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN 414 (459)
T ss_pred HHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC
Confidence 7665554 34555556666666655431 111121111 23345555532110 01 24677888899
Q ss_pred CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 399 GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 399 G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
|+++... .....++|+.....+|.++++.+++.++++++.+-
T Consensus 415 Gvl~~~~-----~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 415 GLLLERG-----GRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred CcEEeec-----CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9886421 11246799988778899999999999999997654
No 371
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.5e-08 Score=98.32 Aligned_cols=291 Identities=14% Similarity=0.125 Sum_probs=178.8
Q ss_pred HcCCCCCC--CCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe-
Q 010897 107 LFNTPVAD--DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL- 183 (498)
Q Consensus 107 l~g~~~~~--~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~- 183 (498)
+||.+.+. .+....+-|.|||.|+-++..-+.+.. .+..|.+|+++|..........|+++...|.
T Consensus 82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~-----------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yy 150 (396)
T COG1448 82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFF-----------PDATVWISDPTWPNHKAIFEAAGLEVETYPYY 150 (396)
T ss_pred hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhC-----------CCceEEeCCCCcHhHHHHHHhcCCceeeeecc
Confidence 57755321 123457788899999988877665531 1346999999999999999999999998887
Q ss_pred cCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCC
Q 010897 184 EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (498)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~ 257 (498)
+..+..+|.+.+.+.+.. +...+.=....||||.- +.+++|.++.++. +.+-++|-||-||.-.+-.+
T Consensus 151 d~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r------~lip~~D~AYQGF~~GleeD 224 (396)
T COG1448 151 DAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER------GLIPFFDIAYQGFADGLEED 224 (396)
T ss_pred ccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CCeeeeehhhhhhccchHHH
Confidence 334456999988877764 33444445578999986 5678899999999 99999999998876432111
Q ss_pred CCccc-c-CCCCeeEEEEcCCccCCC-CCCeEEEEEeCCC--CCCcccccccCccCCCCCCccccCCCch---HHHHHHH
Q 010897 258 DLEWD-F-RLPLVKSINVSGHKYGLV-YAGVGWVVWRTKD--DLPDELVFHINYLGSDQPTFTLNFSKGS---SQIIAQY 329 (498)
Q Consensus 258 ~~~~~-~-~~~~~dsi~~s~hK~l~~-p~g~g~~~~~~~~--~l~~~~~~~~~yl~~~~~~~~l~~sr~~---~~~~a~~ 329 (498)
..... + ....--.++.|..|.+.- .-++|.+.+-..+ .....+..-.....+ . +|.++ ..+++-.
T Consensus 225 a~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~---~----ySnPP~~Ga~vva~I 297 (396)
T COG1448 225 AYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRT---N----YSNPPAHGAAVVATI 297 (396)
T ss_pred HHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHh---c----cCCCchhhHHHHHHH
Confidence 11000 1 111125677788886543 3345655543321 111110000000000 1 11111 1111111
Q ss_pred ---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEee
Q 010897 330 ---YQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVP 403 (498)
Q Consensus 330 ---~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~ 403 (498)
-.|+..-......+++++.++++.|.+.|++.+ .|..+.. +.++++|. +++.+++..-..+.|+.+.
T Consensus 298 L~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFsy~-----Gls~~QV~rLree~~IY~v 370 (396)
T COG1448 298 LNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIIS--QRGMFSYT-----GLSPEQVDRLREEFGIYLV 370 (396)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh--cCceeecC-----CCCHHHHHHHHHhccEEEe
Confidence 223333355667888889999999999999843 2655543 44555543 4677777666666787653
Q ss_pred eecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 404 AYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 404 ~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+ .+ |+++. ..+...++.+.+.|.++
T Consensus 371 ~-------sG----Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 371 A-------SG----RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred c-------CC----eeeec-cCChhhHHHHHHHHHhh
Confidence 3 11 89984 55778888888887765
No 372
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.13 E-value=7.5e-08 Score=99.78 Aligned_cols=333 Identities=12% Similarity=0.044 Sum_probs=174.5
Q ss_pred CChHHHHHHHHHH-hccCC-CCC-cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMAS-INKNY-VDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (498)
Q Consensus 67 ~~~~~~~~~l~~~-~~~n~-~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~ 143 (498)
+.+|.+.+++.+. ..... ..+ ...+...++.+.+.+.+++++.-+. ....++++|+||+..|++.++..+..
T Consensus 74 h~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~~ 148 (464)
T TIGR00699 74 YNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQ-----DQVWTGMSGSDANELAFKAAFMYYRS 148 (464)
T ss_pred CCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 4468888888763 22211 111 1122233344444444455543111 24899999999999999999764321
Q ss_pred HHHh-----cCCC---------CC--CcEEEE-cCCchhHHHHHHHHcCCe-----------eEEEEecCCcc-------
Q 010897 144 KRKE-----QGKP---------YD--KPNIVT-GANVQVCWEKFARYFEVE-----------LKEVKLEEGYY------- 188 (498)
Q Consensus 144 ~~~~-----~g~~---------~~--~~~Iv~-s~~~h~~~~~~~~~~g~~-----------~~~v~~~~~~~------- 188 (498)
..+. .|.+ .+ +.+||. ....|....-+....|-. +..+|.....+
T Consensus 149 ~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 228 (464)
T TIGR00699 149 KQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVK 228 (464)
T ss_pred cCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccc
Confidence 1000 0000 11 225654 445666555444433321 11222210000
Q ss_pred ------ccCHHHHHHHhhh---CCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCccccccccc
Q 010897 189 ------VMNPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (498)
Q Consensus 189 ------~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~ 255 (498)
.-+++.|++++.. +..+|++--.....|.+.| +++|.++|+++ |+++++|+++.|+-. .
T Consensus 229 ~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGr--t 300 (464)
T TIGR00699 229 ENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------NVAFIVDEVQTGVGA--T 300 (464)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeeeeeCCCC--C
Confidence 0135667777753 3455655544444577777 99999999999 999999999977531 1
Q ss_pred CCCCccc-cCCC-CeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHH
Q 010897 256 YPDLEWD-FRLP-LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (498)
Q Consensus 256 ~~~~~~~-~~~~-~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~ 333 (498)
..-..+. +++. ..|.+++ -|.+.+ .|+++ ... .+.. ....+.++ | ++-+.....+..++|+
T Consensus 301 G~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~-~~~-~~~~---~~~~~~~~-----T--~~gnp~~~aaa~a~L~ 363 (464)
T TIGR00699 301 GKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFF-HDP-AFRP---NKPYRQFN-----T--WMGDPSRALILREIIQ 363 (464)
T ss_pred cchhHHHhcCCCCCCCEEEe--hhhhcc---CCccc-cch-hccC---CCCccccc-----C--CCCCHHHHHHHHHHHH
Confidence 1100111 2332 3677655 454421 13332 211 1100 00001111 1 2233345555666776
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCC
Q 010897 334 RLGFEGYKNIMENCMGNARALREGLEKT----GR-FEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMP 408 (498)
Q Consensus 334 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~ 408 (498)
.+.+++ ..++..++.++|.+.|+++ |. +.-+.......++.+.+++. .....+.+.+.++|+++..
T Consensus 364 ~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--~~~~~i~~~~~~~Gvl~~~---- 434 (464)
T TIGR00699 364 EIKRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--AKRDKLLKKARNNGVNIGG---- 434 (464)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH--HHHHHHHHHHHHCCcEEec----
Confidence 665544 3445555566666666543 31 21121001345666766321 1246788999999988743
Q ss_pred CCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 409 ANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 409 ~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+..++|+.....+|.++++.+++.|++++
T Consensus 435 ---~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 435 ---CGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ---CCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 133679999888889999999988887653
No 373
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=3.2e-08 Score=95.75 Aligned_cols=346 Identities=15% Similarity=0.072 Sum_probs=200.1
Q ss_pred ccCCCCCccccc--ccCCChHHHHHHHHHHhccCCC---CCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecCh
Q 010897 52 LDGNPRLNLASF--VTTWMEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (498)
Q Consensus 52 ~~~~p~~~~~~~--~~~~~~~~~~~~l~~~~~~n~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (498)
.+|++.+|++++ ......+++.+.....+.+... +|-.+-++....-.+.+.+|+.+|.+. .++-+-|
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~-------aivYs~g 163 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED-------AIVYSYG 163 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc-------eeeeccc
Confidence 467888887773 3333455666666666655321 222222333333344455999999985 3333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCC---
Q 010897 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT--- 203 (498)
Q Consensus 127 sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t--- 203 (498)
-.++..++-++..+ ++.|++.+..+..+.+..++.--.+.++.. .|.+.|+..+.+++
T Consensus 164 F~ti~S~ipafsKr-------------GDIi~~de~~nfaIq~GlqlSRS~i~~Fkh------ndm~~lerll~E~~~~~ 224 (467)
T KOG1358|consen 164 FSTIESAIPAFSKR-------------GDIIFVDEAVNFAIQKGLQLSRSTISYFKH------NDMEDLERLLPEQEDED 224 (467)
T ss_pred cchhhhcchhhhcc-------------CcEEEEehhhhHHHHHHHhhhhheeEEecC------CCHHHHHHhccCcchhh
Confidence 33444455565443 578899999999999988877766776653 45666666554422
Q ss_pred ----------eEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc--CCCCeeEE
Q 010897 204 ----------ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSI 271 (498)
Q Consensus 204 ----------~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~--~~~~~dsi 271 (498)
+.|++-.---++|.+.|+.+|.++..+| ...+++|+.++.+++.-.....-.-+ ....+|.+
T Consensus 225 ~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky------k~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv 298 (467)
T KOG1358|consen 225 QKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY------KFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIV 298 (467)
T ss_pred hhccccccceEEEEEEeeccCCCcccccHHHHHHHhhh------eEEEEEecccccccccccCccccccCCCCccceeee
Confidence 3455555666789999999999999999 99999999987765422111111122 23457877
Q ss_pred EEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (498)
Q Consensus 272 ~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a 351 (498)
+.+..-.+.. .|.+.+.+. .... ..-+.+. .+-+.-+-++..+-+...++.....+ .++.+.++...
T Consensus 299 ~~sm~~alas---~GgFc~G~~-~i~~-----hQrLSg~--~Y~fSAslPp~la~aa~~ai~i~~~~--p~~~~~L~~k~ 365 (467)
T KOG1358|consen 299 TASMETALAS---GGGFCAGKS-FIAD-----HQRLSGS--GYCFSASLPPYLAGAAIKAILIEEWN--PEIVQPLRAKV 365 (467)
T ss_pred eecccccccc---cCceeecce-eeEe-----eeecccc--ceeeeccCchhhhhhHHHHHHHHhhC--cchhhhhhccc
Confidence 7776544322 222222221 1100 0111111 11111222223333333444333322 34667777777
Q ss_pred HHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCC--CH----HHHHHHHHhcCcEeeeecC--CCC-CCCeeEEEEeec
Q 010897 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAH--TV----FEISEGLRKFGWIVPAYTM--PAN-AENVAVLRVVVR 422 (498)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~--~~----~~l~~~L~~~G~~v~~~~~--~~~-~~~~~~lRv~v~ 422 (498)
..+.+.|....++.+.+.+ ..|++-.++.+..+- +. ++++++...+|+.+..... ... ..-..-+|+++.
T Consensus 366 ~~~H~~l~~~s~~~v~~~~-~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~ 444 (467)
T KOG1358|consen 366 AKFHAALSSNSGFIVSGSP-ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVS 444 (467)
T ss_pred cccchhhhcCCceEEecCc-CCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEe
Confidence 8888888887778887765 578887777643221 11 3455554455665522110 000 001124999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010897 423 EDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 423 ~~~t~~~~~~l~~~l~~~l~~ 443 (498)
...+++|++++.+.|+++...
T Consensus 445 a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 445 AGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999888887653
No 374
>PRK06148 hypothetical protein; Provisional
Probab=99.11 E-value=5.4e-08 Score=110.45 Aligned_cols=329 Identities=13% Similarity=0.078 Sum_probs=182.0
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~ 147 (498)
.+|.+.+++.+.+++-.... .+ ..+.+.++.+.|++++.-+. ....++++||||+..|++.++..
T Consensus 639 ~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~nSGsEA~e~AlklAr~~------- 703 (1013)
T PRK06148 639 AHPRVVAAAARQAARLNTNT-RY--LHDAIVAYAERLTATLPDGL-----TVAFFVNSGSEANSLALRLARAH------- 703 (1013)
T ss_pred CCHHHHHHHHHHHhhcCCcC-Cc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHh-------
Confidence 46888888888776532211 11 23344466667777763221 24899999999999999998753
Q ss_pred cCCCCCCcEEEE-cCCchhHHHHHHHHcC------------CeeEEEEecCC---ccc-cC-------HHHHHHHhh---
Q 010897 148 QGKPYDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLEEG---YYV-MN-------PVKAVELVD--- 200 (498)
Q Consensus 148 ~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g------------~~~~~v~~~~~---~~~-~d-------~~~L~~~i~--- 200 (498)
.| +.+||. ....|....-+....+ -.+..++.... .|. -| .+.+++.+.
T Consensus 704 tG----r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 704 TG----QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred cC----CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 12 345554 4445553322222111 01222221100 011 01 134555553
Q ss_pred ---hCCeEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCC-Cccc-cCCCCeeEE
Q 010897 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-FRLPLVKSI 271 (498)
Q Consensus 201 ---~~t~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~-~~~~-~~~~~~dsi 271 (498)
+++.+|++--....-|.+.| +++|.++|+++ |+++++|+++.||-- .... .... +++ ..|.+
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~------g~llI~DEVqtGfGR--tG~~~~a~e~~gv-~PDiv 850 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA------GGVCIADEVQVGFGR--VGSHWWAFETQGV-VPDIV 850 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEecccCCCC--CCCcchhhhhcCC-Cccee
Confidence 23445554433333466665 89999999999 999999999977621 1110 0000 122 25776
Q ss_pred EEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (498)
Q Consensus 272 ~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a 351 (498)
++ -|.+.++..+|.++.+.+ .. +.+... .+. ..| ++-+.....+..+.|..+.+++ ..++..++.
T Consensus 851 t~--gK~lggG~Plgav~~~~e-i~-~~~~~g-~~~-----~~T--f~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G 915 (1013)
T PRK06148 851 TM--GKPIGNGHPMGAVVTTRE-IA-DSFDNG-MEY-----FNT--FGGNPVSCAIGLAVLDIIEDED---LQRNALEIG 915 (1013)
T ss_pred ee--cccccCCcceEEEEEcHH-HH-hhccCC-Ccc-----ccC--CCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHH
Confidence 65 566666677888887642 21 211100 001 112 2222355566667777665553 456666677
Q ss_pred HHHHHHHhcCC-CeEEeeCCC-CccEEEEEecCCC---CCC---HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC
Q 010897 352 RALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS---AHT---VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE 423 (498)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~---~~~---~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~ 423 (498)
++|.+.|+++- .+.++..-. ..-++.+.+..+. ..+ ...+.+.|.++|+++... ....+++|+....
T Consensus 916 ~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-----g~~~~vlr~~Ppl 990 (1013)
T PRK06148 916 NYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE-----GPHDNVLKIRPPL 990 (1013)
T ss_pred HHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc-----CCCCCEEEEeCCc
Confidence 77777776541 111221111 1234445553211 011 346888899999887421 1224679999877
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 010897 424 DFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 424 ~~t~~~~~~l~~~l~~~l~~l 444 (498)
.+|.+++|++++.|+++++++
T Consensus 991 ~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 991 IFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999764
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.08 E-value=5.8e-08 Score=98.02 Aligned_cols=341 Identities=15% Similarity=0.076 Sum_probs=186.7
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+..|++.+++.+.+++-.+....+..... -.++.+.|+++..-.. -..+.++++||+|+-.|++.++..|..+
T Consensus 60 h~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~----l~~vFf~~sGSeAvEtAlKma~qY~~~~-- 132 (449)
T COG0161 60 HGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGG----LDHVFFTDSGSEAVETALKMALQYWRAR-- 132 (449)
T ss_pred cCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCC----ccEEEEeCCchHHHHHHHHHHHHHHHhc--
Confidence 34688889888887774332111111111 1256666888775210 1249999999999999999998877543
Q ss_pred hcCCCCCCcEEEE-cCCchhHHHHHHHHcCC-------------eeEEEEecC-------Cccc----cCHHHHHHHhhh
Q 010897 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEE-------GYYV----MNPVKAVELVDE 201 (498)
Q Consensus 147 ~~g~~~~~~~Iv~-s~~~h~~~~~~~~~~g~-------------~~~~v~~~~-------~~~~----~d~~~L~~~i~~ 201 (498)
|.+. +.++|. ...+|.+..-+....|. ++..+|... +.+. -..++|+++|..
T Consensus 133 --G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~ 209 (449)
T COG0161 133 --GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE 209 (449)
T ss_pred --CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh
Confidence 3332 233443 44566654444444331 123333321 0011 224567777765
Q ss_pred ---CCeEEEEeec-cCC-cccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEE
Q 010897 202 ---NTICVAAILG-STL-TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSI 271 (498)
Q Consensus 202 ---~t~~v~~~~~-~t~-tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi 271 (498)
.+++-++.-| .-. .|.+.| ++++.+||++| |++++.|++-.||-- ...-.... +++ .-|.+
T Consensus 210 ~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky------~ILlI~DEV~tGFGR--TG~~FA~e~~gi-~PDi~ 280 (449)
T COG0161 210 HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY------GILLIADEVATGFGR--TGKMFACEHAGI-VPDIL 280 (449)
T ss_pred cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc------CcEEEeecceeCCCc--CchhhhhhhcCC-CCCee
Confidence 3444333332 222 455543 68899999999 999999999877631 11111101 111 24666
Q ss_pred EEcCCccC-CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010897 272 NVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (498)
Q Consensus 272 ~~s~hK~l-~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~ 350 (498)
+++ |-+ .++..+|.++++++ +-+. +...+.+.....+| +|-++....+..+.|+.+.++++ +++..++
T Consensus 281 ~~a--KGLT~GY~Pl~a~l~~~~--I~~~--~~~~~~~~f~HG~T--YsghPlacAaAla~L~i~e~e~l---~~~~~~~ 349 (449)
T COG0161 281 CLA--KGLTGGYLPLSAVLTSDR--IYEA--FSDGDAGAFMHGHT--YSGNPLACAAALANLDILEEEDL---LERVAEI 349 (449)
T ss_pred eec--ccccccchhhHhHhhhHH--HHHH--HhcccCCeeccCCc--cccCHHHHHHHHHHHHHHHhcCH---HHHHHHH
Confidence 654 433 23445666665543 1111 11111111122233 44444555555666666666654 4555678
Q ss_pred HHHHHHHHhc-CCCeEEeeCCCCcc-EEEEEecCCCC-CC------HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEee
Q 010897 351 ARALREGLEK-TGRFEILSKDVGVP-LVAFSLKDSSA-HT------VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVV 421 (498)
Q Consensus 351 a~~l~~~L~~-~~~~~~~~~~~~~~-~v~f~~~~~~~-~~------~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v 421 (498)
..+|.+.|++ +.+...+.+-...+ +.++.+..+.. .. ...+.+...++|.+++.. + ..+=++-
T Consensus 350 ~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-------g-~~i~~~P 421 (449)
T COG0161 350 GAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-------G-DVIYLMP 421 (449)
T ss_pred HHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-------C-CEEEEcC
Confidence 8888888876 44333444322333 33445543221 11 457888889999988653 1 1222332
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 422 REDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 422 ~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
-...|+++++++++.+++++++..
T Consensus 422 Pliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 422 PLIITREEIDELVDALREALDETL 445 (449)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHH
Confidence 234699999999999999998654
No 376
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.06 E-value=2.3e-07 Score=89.82 Aligned_cols=303 Identities=18% Similarity=0.134 Sum_probs=178.3
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCcceeeecCh-hHHHHHHHHHHHHHHHHHHHhcCCCCCCc--EEEEcCCchhHHH
Q 010897 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS-SEAIMLAGLAFKRKWQQKRKEQGKPYDKP--NIVTGANVQVCWE 168 (498)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~-sea~~la~~a~~~~~~~~~~~~g~~~~~~--~Iv~s~~~h~~~~ 168 (498)
....+-.+..+.+.+|+++|++. .+.+..|| |...-++.+.+... +. -|....-+..+..
T Consensus 47 ~~~~v~~~a~~~lreLl~iPd~Y----~VlflqGGat~qf~~~p~nLl~~-------------~~~~yv~~g~Ws~~a~~ 109 (365)
T COG1932 47 EFKNVLEEAEKDLRELLNIPDDY----KVLFLQGGATGQFAMAPMNLLGK-------------RGTDYVDTGAWSEFAIK 109 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----eEEEEcCccHHHHHHHHHhhhcc-------------cCceeEeeeehhHhHHH
Confidence 44555567888899999999854 47777654 44444444444332 11 2555555555666
Q ss_pred HHHHHcC-CeeEEEEecCCcc--ccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 169 KFARYFE-VELKEVKLEEGYY--VMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 169 ~~~~~~g-~~~~~v~~~~~~~--~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
.+-++.. ..+..+...+.+| ..|++... +.++...|..|..+|.+|.--|- .... +.+.++++|+
T Consensus 110 eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~------~p~~----~~~~~~v~D~ 177 (365)
T COG1932 110 EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPE------LPDI----GSDGLLVADA 177 (365)
T ss_pred HHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccC------CCCC----CCCceEEEec
Confidence 6544433 3333332222112 23444333 44455558888888989987551 0111 1147899999
Q ss_pred CcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc----ccCccCCCCCCccccCCCc
Q 010897 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF----HINYLGSDQPTFTLNFSKG 321 (498)
Q Consensus 246 A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~----~~~yl~~~~~~~~l~~sr~ 321 (498)
.++.+..+ +.+.+.|.|..+.+|.+ +|.|.+++++|.. .+.+.-.. --+|...-...-++ .|++
T Consensus 178 SS~ilsr~---------iDvsk~dviyagaQKnl-GpaGltvvIvr~~-~l~r~~~~~~P~if~y~~~~~~~s~y-NTPp 245 (365)
T COG1932 178 SSAILSRP---------IDVSKYDVIYAGAQKNL-GPAGLTVVIVRPD-LLERAESYTLPSIFDYLTHADNGSMY-NTPP 245 (365)
T ss_pred ccHHhcCC---------CChhHcceEEEehhhcc-CccceEEEEEcHH-HHhcccccCCchHhhchhhhccCCcc-CCcH
Confidence 98876532 23457899999999997 6888999998864 22221111 11222211111111 2333
Q ss_pred hHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--eeCCC-CccEEEEEecCCCCCCHHHHHHHHHh
Q 010897 322 SSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEI--LSKDV-GVPLVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 322 ~~~~~a~~~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
.+.+...-.+++-+. .-|.+.+.++..+.++.|.+.+.+.+ |.. +.+.. +...|+|++.+. .+|. .+.+.+.+
T Consensus 246 tfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~-fy~~~v~~~~RS~mnV~f~~~~~-~ld~-~fv~eae~ 322 (365)
T COG1932 246 TFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD-FYRNLVAKANRSRMNVTFTLVDA-ELDK-GFVAEAEA 322 (365)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC-ccccccchhhccceeEEEEcCcH-HHHH-HHHHHHHH
Confidence 233322223444443 35688899999999999999999986 432 11222 456789998632 3443 67777777
Q ss_pred cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 398 FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 398 ~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+|.+.... + .-.+-+|+++-+....++++.|++-|+.+.+.
T Consensus 323 ~gl~~lkG----h-r~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 323 AGLIYLKG----H-RSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred cCCceecc----c-cCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 77653221 1 11233999998888999999888888877653
No 377
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=2e-07 Score=88.35 Aligned_cols=325 Identities=14% Similarity=0.153 Sum_probs=176.4
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
+|.+.+++.+..++-... +-.-....--+..+.+.++||++. ..-++.|.||+-.|+..+|+ |--+. .
T Consensus 77 hpki~~aLqeq~~kLtls--srafYnd~~~~f~~~vt~lf~~~k-------vlpmnTGaEa~Eta~KLaR~-wgy~~--K 144 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLS--SRAFYNDVLGEFAEYVTKLFGYDK-------VLPMNTGAEAVETACKLARK-WGYRK--K 144 (427)
T ss_pred CHHHHHHHHHHHhHhhhh--hHHHhhhhHHHHHHHHHHhcCcce-------eeecccchhHHHHHHHHHHH-HHHhh--c
Confidence 577778777766652221 101111122245566899999985 77788889999999988864 43222 2
Q ss_pred CCCCCCcEEEEcC-Cch-------------hHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhC-CeEEEEeeccC
Q 010897 149 GKPYDKPNIVTGA-NVQ-------------VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN-TICVAAILGST 213 (498)
Q Consensus 149 g~~~~~~~Iv~s~-~~h-------------~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~-t~~v~~~~~~t 213 (498)
+.+.++-.|+... .-| .+|....-.+=..+..||- -|.++|+.++++. ...+++--..-
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y------~d~eale~~l~~~~vaaFivEPIQG 218 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY------GDAEALEVALKSPNVAAFIVEPIQG 218 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc------CCHHHHHHHhcCCCeeEEEeecccc
Confidence 2232222333222 122 1333332222122444442 3689999999763 34444433344
Q ss_pred CcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEE
Q 010897 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (498)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~ 289 (498)
.-|.+-| ++...+||++| +++++.|+.+.|..- ...-+..+..--.-|.+.+ +.-..++-+.++.++
T Consensus 219 EaGVvvP~~GYL~~vreLCtky------nvl~I~DEvQTGl~R--TGk~la~d~env~PDivil-gKalSGG~~Pvsavl 289 (427)
T KOG1402|consen 219 EAGVVVPPPGYLKKVRELCTKY------NVLLIADEVQTGLAR--TGKLLACDYENVRPDIVIL-GKALSGGVYPVSAVL 289 (427)
T ss_pred ccceEeCCchhHHHHHHHHHhh------cEEEEehhhhhcccc--cCcEEEeehhhcCCCeEEE-eccccCCeeeeEEEE
Confidence 4566643 78999999999 999999999987542 1111122221112344433 222223334445555
Q ss_pred EeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eE-Ee
Q 010897 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-FE-IL 367 (498)
Q Consensus 290 ~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~-~~ 367 (498)
..+.-.+ .|-.+ ....|..+.. .......++|..+-+ +...+++..+...|+.+|.+++- |. ++
T Consensus 290 ~~~~im~--------~~~pg-eHgsTyggNp--Lg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~~p~~v 355 (427)
T KOG1402|consen 290 ADDDIML--------NIKPG-EHGSTYGGNP--LGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKKFPHVV 355 (427)
T ss_pred ecHHHHh--------ccCCC-ccccccCCCh--HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 3332111 11111 1111111111 233333344444433 46778888899999999988762 21 12
Q ss_pred eCCC-C--ccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 368 SKDV-G--VPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 368 ~~~~-~--~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
..-. . .+-+.|.....++.++.+++-.|.++|...- | -+..++|++---.+++++.+.-++.|++++
T Consensus 356 ~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAk----p---tH~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 356 KEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAK----P---THGNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred heeeccceEEEEEeccccccchhHHHHHHcccccccccC----C---CCCCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 2111 2 2233344333456788999999999997632 2 235589998655678888887777777665
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.03 E-value=1.1e-08 Score=100.92 Aligned_cols=223 Identities=17% Similarity=0.127 Sum_probs=143.3
Q ss_pred ChHHHHHHHHHHhccCCCCCcCCcchHHHHH---HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYVDMDEYPVTTELQN---RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~---~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~ 144 (498)
.++++.+++...++...- .+.+-....... .+...++.+.|... +++++..+.|+++.+.+....
T Consensus 39 ~~~e~iea~~~~~~~~v~-Le~~l~~g~~~~R~~~~~~~~~~~~~aea-------~~ivnnn~aAVll~~~al~~~---- 106 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVE-LETDLKTGKRGARLTELAELLCGLTGAEA-------AAIVNNNAAAVLLTLNALAEG---- 106 (395)
T ss_pred CCHHHHHHHHHHhcccce-eeeecccchhhHHHHHHHHHHhcccchhh-------eeeECCcHHHHHHHHhhhccC----
Confidence 457788888777766321 122222222222 33444444444433 888888888887777666431
Q ss_pred HHhcCCCCCCcEEEEcC-----CchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccc-
Q 010897 145 RKEQGKPYDKPNIVTGA-----NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF- 218 (498)
Q Consensus 145 ~~~~g~~~~~~~Iv~s~-----~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~- 218 (498)
-++|++. ..|+++...++..|++++.|-... .-...+++.+|.++|.++.-++..|. |..
T Consensus 107 ----------~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn---~t~~~d~~~AIne~ta~llkV~s~~~-~f~~ 172 (395)
T COG1921 107 ----------KEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN---RTHLKDYELAINENTALLLKVHSSNY-GFTG 172 (395)
T ss_pred ----------CeEEEEccccccCCCCChhHHHHHcCCEEEEecccC---cCCHHHHHHHhccCCeeEEEEeeccc-cccc
Confidence 2454432 589999999999999999887543 46788999999999998888777765 444
Q ss_pred -cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCC
Q 010897 219 -EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (498)
Q Consensus 219 -~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~ 297 (498)
.+++++.++|+++ +++++||.++|..+-+ -+.++ .+-..++|.+++|++|.+.+|. .|+++ ..++++
T Consensus 173 ~l~~~~l~~ia~~~------~lpvivD~aSg~~v~~--e~~l~-~~la~GaDLV~~SgdKllgGPq-aGii~-GkKelI- 240 (395)
T COG1921 173 MLSEEELVEIAHEK------GLPVIVDLASGALVDK--EPDLR-EALALGADLVSFSGDKLLGGPQ-AGIIV-GKKELI- 240 (395)
T ss_pred cccHHHHHHHHHHc------CCCEEEecCCcccccc--ccchh-HHHhcCCCEEEEecchhcCCCc-cceEe-chHHHH-
Confidence 4678899999999 9999999999885421 11111 1112469999999999998887 56665 444443
Q ss_pred cccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcH
Q 010897 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (498)
Q Consensus 298 ~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~ 337 (498)
..+..++- .+.+.-.+ ..+.++.++|+.+..
T Consensus 241 ~~lq~~~l-------~Ralrv~K--~tla~l~~aLe~y~~ 271 (395)
T COG1921 241 EKLQSHPL-------KRALRVDK--ETLAALEAALELYLQ 271 (395)
T ss_pred HHHHhhhh-------hhhhhcCc--HhHHHHHHHHHHHcC
Confidence 21111111 11111222 356677888877754
No 379
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.98 E-value=2e-07 Score=89.40 Aligned_cols=312 Identities=16% Similarity=0.216 Sum_probs=178.0
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHH-HHHcCCe
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEVE 177 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~-~~~~g~~ 177 (498)
.+.+.+.+.||+.. .+-|..|-.|-.+-.-.+.++ |....+-+.++++..|+..-.+ ....|..
T Consensus 83 ~L~~avkdifGfq~-------~iPthQGRgAE~Il~~i~ik~--------~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~ 147 (471)
T COG3033 83 ALADAVKDIFGFQY-------TIPTHQGRGAENILIPILIKK--------GEQEPGSKMVAFSNYHFDTTRGHIQINGAT 147 (471)
T ss_pred HHHHHHHHhcCcee-------eeeccCCccHHHHHHHHHhhh--------ccccCCccccccccceecchhHHHHhcCCc
Confidence 44555778889864 555554443332211112111 1111123677888888855543 4566887
Q ss_pred eEEEEecCC---------ccccCHHHHHHHhhh----CCeEEEEeeccCCcc-c---ccCHHHHHHHHHHhhcccCCCce
Q 010897 178 LKEVKLEEG---------YYVMNPVKAVELVDE----NTICVAAILGSTLTG-E---FEDVKLLHDLLTKKNEETGWDTP 240 (498)
Q Consensus 178 ~~~v~~~~~---------~~~~d~~~L~~~i~~----~t~~v~~~~~~t~tG-~---~~~l~~I~~la~~~~~~~~~~~~ 240 (498)
++.+++++. .+.+|+++|+++|++ |...|+++.-+|..| . +.+++++.+||++| +++
T Consensus 148 ~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky------~ip 221 (471)
T COG3033 148 PRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY------DIP 221 (471)
T ss_pred cccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc------CCc
Confidence 887776521 146999999999986 455566655555544 3 37889999999999 999
Q ss_pred EEEecCc-ccccccccC---CCCc-ccc------CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCC--C-cccccccCc
Q 010897 241 IHVDAAS-GGFIAPFLY---PDLE-WDF------RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL--P-DELVFHINY 306 (498)
Q Consensus 241 l~vD~A~-~g~~~~~~~---~~~~-~~~------~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l--~-~~~~~~~~y 306 (498)
++.|+|- +.-+ =|.. +.++ |.. .+..+|-++.|++|=++++.| |++.++++..+ - .+-.....+
T Consensus 222 vv~Da~RfaENa-YFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~V~~ 299 (471)
T COG3033 222 VVMDAARFAENA-YFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLVVVQ 299 (471)
T ss_pred EEeehhhhhhhh-hhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHHHhheEee
Confidence 9999974 2111 0121 1221 221 145689999999999999887 78888887532 0 110111111
Q ss_pred cCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEec-----
Q 010897 307 LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK----- 381 (498)
Q Consensus 307 l~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~----- 381 (498)
-| ..++ |.-.+-.+-++..+|..--. ...+++..+..+||.+.|++.+ +.++.+. +..-|.+...
T Consensus 300 eG--~~tY---Ggl~GrdmealAvGL~e~~~---~~yl~~Rv~Qv~YL~~~l~~~G-Vpi~~pa-GGHavfvda~~~lph 369 (471)
T COG3033 300 EG--FPTY---GGLAGRDMEALAVGLREGVN---FDYLAHRVAQVQYLADGLEEAG-VPIVQPA-GGHAVFVDAGKFLPH 369 (471)
T ss_pred cc--cccc---CcccchhHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHhcC-CeeEecC-CCceEEeehhhhcCC
Confidence 11 1222 22223344555555532111 2455666677889999999987 7777654 3333333321
Q ss_pred -CCCCCCHHHHHHHHHhc-CcEee---eecCCCCC-------CCeeEEEEeec-CCCCHHHHHHHHHHHHHHHHH
Q 010897 382 -DSSAHTVFEISEGLRKF-GWIVP---AYTMPANA-------ENVAVLRVVVR-EDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 382 -~~~~~~~~~l~~~L~~~-G~~v~---~~~~~~~~-------~~~~~lRv~v~-~~~t~~~~~~l~~~l~~~l~~ 443 (498)
+.+.+....|+-.|-.. |+-.. .+.++.+. .....+|+++- ...|.+.+|.+++.++++.+.
T Consensus 370 ip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 370 IPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred CChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 22345667787777654 44321 11121111 11257899984 345777787777766666543
No 380
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=1.8e-06 Score=84.56 Aligned_cols=339 Identities=14% Similarity=0.005 Sum_probs=177.9
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+..|++.+++.+.+++-.+....+-. .+ .-.+.+.+.+..+-+. ...+.++++|||||..|+..+++...
T Consensus 72 hanpev~ral~~q~~k~~hs~~~~~t-~e-av~l~~~l~~~~~~~~----~~rvff~nsGTeAne~ALK~Ark~~~---- 141 (433)
T KOG1401|consen 72 HANPEVARALAEQAKKLGHSSNGYFT-LE-AVELEEVLSAVLGKGS----AERVFFCNSGTEANETALKFARKFTG---- 141 (433)
T ss_pred CCCHHHHHHHHHHHhhheeccCcccc-HH-HHHHHHHHHhcccCCC----ccEEEEecCCcHHHHHHHHHHHHhhc----
Confidence 44689999998888774332221111 11 1233333444443222 23599999999999999999876521
Q ss_pred hcCCCCCCcEEE-EcCCchhHHHHHHHHcCCeeEEEEec---CCc---cccCHHHHHHHhhhCC--eEEEEeeccCCccc
Q 010897 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKEVKLE---EGY---YVMNPVKAVELVDENT--ICVAAILGSTLTGE 217 (498)
Q Consensus 147 ~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~~~~v~~~---~~~---~~~d~~~L~~~i~~~t--~~v~~~~~~t~tG~ 217 (498)
.+.+.++..+| +-...|....-++...+......|.+ ++- ---|+.+|++.++... ++-++.-|-.-.|-
T Consensus 142 -~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG 220 (433)
T KOG1401|consen 142 -KKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGG 220 (433)
T ss_pred -ccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCC
Confidence 11111223344 55566664444444444433333221 110 0147899999998755 34334444444444
Q ss_pred cc-----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCC--CCeeEEEEcCCccCCCCCCeEEEEE
Q 010897 218 FE-----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGLVYAGVGWVVW 290 (498)
Q Consensus 218 ~~-----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~--~~~dsi~~s~hK~l~~p~g~g~~~~ 290 (498)
+- -+..|.++|+++ |++++.|+++-|+.- ..+ .|...+ -.-|.+++ -|.+.++..+|.+++
T Consensus 221 ~~p~~peFl~~L~k~C~~~------~vl~I~DEV~tG~gR--~g~--~~a~e~~~~~PDI~t~--aK~L~gGlPigA~~v 288 (433)
T KOG1401|consen 221 IIPADPEFLIGLRKECDDN------GVLLIFDEVQTGLGR--LGY--GWAQEYFGVTPDITTV--AKPLGGGLPIGATGV 288 (433)
T ss_pred cccCCHHHHHHHHHHHhhc------CceEEeehhhhCccc--cch--HHHHHHhCcCCcceee--hhhccCCceeEEEee
Confidence 42 356789999999 999999999987531 111 122111 12455543 588888888999998
Q ss_pred eCCCCCCcccccccC-ccCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEee
Q 010897 291 RTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILS 368 (498)
Q Consensus 291 ~~~~~l~~~~~~~~~-yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (498)
+++- ...+..... |.++ | ++-++....+...+|..+.+.. ++++......+++.+.+.+.+.+.-. ..
T Consensus 289 ~~kV--~~~i~~~~~l~hg~-----T--f~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i-~g 358 (433)
T KOG1401|consen 289 RDKV--AEMISPGDHLYHGG-----T--FSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSI-CG 358 (433)
T ss_pred hHHH--HhhcCCCCccccCc-----c--cCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCce-ee
Confidence 8742 122111111 1111 1 2333345555667777776654 45555555568888888888776321 11
Q ss_pred CCCCccEEEEEe--cCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEE--EeecCCCCHHHHHHHHHHHHHHHHHH
Q 010897 369 KDVGVPLVAFSL--KDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLR--VVVREDFSRSLVERLISHIEEVLKEI 444 (498)
Q Consensus 369 ~~~~~~~v~f~~--~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lR--v~v~~~~t~~~~~~l~~~l~~~l~~l 444 (498)
.-.+..++-|.. +..+..|...-...|...++.... ..+..+.+ +.. -..+.|.++++++.+.+.+..+
T Consensus 359 ~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~------~~gv~i~P~~~l~-~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 359 GVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLL------EEGVRIAPIYLLT-VEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred eeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccc------cceEEEecccccc-ccCcHHHHHHHHHHHHHHHHHh
Confidence 011222333332 211112222222333333332110 01122222 111 2335789999999998888765
Q ss_pred H
Q 010897 445 E 445 (498)
Q Consensus 445 ~ 445 (498)
.
T Consensus 432 ~ 432 (433)
T KOG1401|consen 432 N 432 (433)
T ss_pred c
Confidence 3
No 381
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.75 E-value=8e-07 Score=86.36 Aligned_cols=322 Identities=16% Similarity=0.035 Sum_probs=179.0
Q ss_pred ChHHHHHHHHHHhccCCCCCcCC--cchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYVDMDEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~ 145 (498)
-+|.+.+++.+-+..-++....+ +... ++.+.|.+++--+. ....|+++|||||-+|++.++..+.
T Consensus 67 chP~v~~a~~kQl~~l~H~t~~~~~~pi~----~~Ae~L~s~~P~~l-----~~vfF~nsGsEANelal~mar~Yt~--- 134 (442)
T KOG1404|consen 67 CHPDVVAAAVKQLKKLYHTTSGYLNPPIH----DLAEALVSKLPGDL-----KVVFFVNSGSEANELALKMARLYTG--- 134 (442)
T ss_pred CChHHHHHHHHhhhhhEEeeccccCCcHH----HHHHHHHHhCCCCc-----eEEEEecCCchHHHHHHHHHHHhcC---
Confidence 36778777777665433322222 2222 33444666553222 3599999999999999999877642
Q ss_pred HhcCCCCCCcEEE-EcCCchhHHHHHHHHcCCeeEEEEecC-----------Ccc----ccC-----H----HHHHHHhh
Q 010897 146 KEQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKEVKLEE-----------GYY----VMN-----P----VKAVELVD 200 (498)
Q Consensus 146 ~~~g~~~~~~~Iv-~s~~~h~~~~~~~~~~g~~~~~v~~~~-----------~~~----~~d-----~----~~L~~~i~ 200 (498)
.-.|| .....|.+....+.+.++...+-+... +.| .-+ - +++++.+.
T Consensus 135 --------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~ 206 (442)
T KOG1404|consen 135 --------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLIL 206 (442)
T ss_pred --------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHH
Confidence 12344 456677777666666666544433211 000 001 1 33444443
Q ss_pred h---CC-eEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEE
Q 010897 201 E---NT-ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (498)
Q Consensus 201 ~---~t-~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~ 272 (498)
. .+ .+.++-...-.-|.+++ +++..++|+++ |.+++.|+++.||.- .. .-|.|.-.++.==.
T Consensus 207 ~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~------Ggl~IaDEVqtGfGR--tG--~~wgfe~h~v~PDI 276 (442)
T KOG1404|consen 207 YDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR------GGLFIADEVQTGFGR--TG--HMWGFESHGVVPDI 276 (442)
T ss_pred hcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc------CCEEEehhhhhcccc--cc--ccccccccCCCccH
Confidence 2 23 33444333333366654 68899999999 999999999988742 11 23334322221112
Q ss_pred EcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010897 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (498)
Q Consensus 273 ~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~ 352 (498)
++.-|.++....+|.+++..+ . .+.+..+..|. +|. +..+ .......+.|+.+.+ +++.++..+...
T Consensus 277 vTmAKgiGnG~Pl~AVvtt~E-I-a~v~~~~~~~f------nTy-ggnP-~a~avg~aVL~Vike---e~LqE~aa~vG~ 343 (442)
T KOG1404|consen 277 VTMAKGIGNGFPLGAVVTTPE-I-ADVLNQKSSHF------NTY-GGNP-VACAVGLAVLKVIKE---ENLQENAAEVGS 343 (442)
T ss_pred HHHHhhccCCCcceeeecCHH-H-HHHHHhccccc------ccc-CCCc-hhHHHHHHHHHHHHH---HhHHHHHHHHHH
Confidence 345688878888888886542 2 12211111111 111 2222 223333344554444 466788888999
Q ss_pred HHHHHHhcCC-CeEEeeCCCCccE-EEEEecCCC-------CCCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecC
Q 010897 353 ALREGLEKTG-RFEILSKDVGVPL-VAFSLKDSS-------AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVRE 423 (498)
Q Consensus 353 ~l~~~L~~~~-~~~~~~~~~~~~~-v~f~~~~~~-------~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~ 423 (498)
||.+.|.++. .++++.+-.+.++ +-..+..+. ..-...+.+.+.+.|+.+-.. .....++|++--.
T Consensus 344 yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g-----~i~G~vfriaPPl 418 (442)
T KOG1404|consen 344 YLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKG-----GIHGNVFRIAPPL 418 (442)
T ss_pred HHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecc-----cccceEEEecCCe
Confidence 9999998764 3566655432222 223332111 112356778999999887222 1334589999777
Q ss_pred CCCHHHHHHHHHHH
Q 010897 424 DFSRSLVERLISHI 437 (498)
Q Consensus 424 ~~t~~~~~~l~~~l 437 (498)
.+|.+|+|.+++..
T Consensus 419 ciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 419 CITKEDIDFAVEYF 432 (442)
T ss_pred eccHHHHHHHHHHH
Confidence 88999996544433
No 382
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.72 E-value=1.3e-06 Score=84.81 Aligned_cols=256 Identities=19% Similarity=0.183 Sum_probs=134.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCchhHHHHHH-----
Q 010897 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFA----- 171 (498)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~-s~~~h~~~~~~~----- 171 (498)
+.+.+-+|+.||.+.. ..-.--.+||.|+-+++.+..++ +++++. +-.-|-.+++..
T Consensus 57 d~le~iyA~vfgaE~A----LVRpq~vSGTHAi~~~Lfg~Lrp-------------GD~ll~~tG~PYDTL~~VIG~~g~ 119 (403)
T PF06838_consen 57 DKLERIYADVFGAEDA----LVRPQFVSGTHAIALALFGVLRP-------------GDELLSITGKPYDTLEEVIGIRGN 119 (403)
T ss_dssp HHHHHHHHHHCT-SEE----EEETTS-SHHHHHHHHHHHH--T-------------T-EEEESSSS--CCHHHHHTSSSS
T ss_pred HHHHHHHHHHhCchhh----hhcccccchHHHHHHHHHhcCCC-------------CCeEEEcCCCchhhHHHHhCCCCC
Confidence 3444559999999751 11112237999999999998875 455553 333344455443
Q ss_pred -----HHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc----ccccCHHHHHHHHHHhhcccCCCceEE
Q 010897 172 -----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT----GEFEDVKLLHDLLTKKNEETGWDTPIH 242 (498)
Q Consensus 172 -----~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t----G~~~~l~~I~~la~~~~~~~~~~~~l~ 242 (498)
+-+|+..+.|++.++ +.+|.+.++++++++|++|.+--..-+. =.+++++++.+++|+.+. ++++.
T Consensus 120 ~~GSL~e~Gi~Y~~v~L~~d-g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p----~~iif 194 (403)
T PF06838_consen 120 GPGSLKEFGIKYREVPLTED-GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP----DVIIF 194 (403)
T ss_dssp SSSSTGGGT-EEEE--B-TT-SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T----TSEEE
T ss_pred CCCChHHhCceeEEEeecCC-CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC----CeEEE
Confidence 235778999999886 7899999999999999988775433332 345778888888888743 99999
Q ss_pred EecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCc-ccccccCccCCCCCCccccCCC
Q 010897 243 VDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPD-ELVFHINYLGSDQPTFTLNFSK 320 (498)
Q Consensus 243 vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~-~~~~~~~yl~~~~~~~~l~~sr 320 (498)
||.+||.|+.. .+ +..+ ++|.+..|.-|..++. ..+|..++..++.... ..++..+=++.... .++...|
T Consensus 195 VDNCYGEFvE~---~E-P~~v---GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G-~t~~~~R 266 (403)
T PF06838_consen 195 VDNCYGEFVET---QE-PTEV---GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVG-ATLGTNR 266 (403)
T ss_dssp EE-TTTTTTSS---S--GGGG---T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS---TTTHH
T ss_pred EeCCcceeccc---cC-cccc---chhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccc-cCcchHH
Confidence 99999998631 11 1122 6999999999975443 2233333344332211 11222333333221 1111222
Q ss_pred chHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC--Ccc-EEEEEecCCCCCCHHHHHHHHHh
Q 010897 321 GSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVP-LVAFSLKDSSAHTVFEISEGLRK 397 (498)
Q Consensus 321 ~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~-~v~f~~~~~~~~~~~~l~~~L~~ 397 (498)
.+-|-. .+. ...+.+..+-+......+++++ |++.+... +.- +.++.+..+ ..-..+|+.+.+
T Consensus 267 ----~~~QGl---FlA----P~vV~eAlKgaif~A~~fe~lG-~~v~P~~~~~R~DiIQai~l~~~--e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 267 ----LMFQGL---FLA----PHVVGEALKGAIFAAALFEKLG-FEVSPKPDDPRSDIIQAIELGSP--EKLIAFCQGIQA 332 (403)
T ss_dssp ----HHHHHH---HHH----HHHHHHHHHHHHHHHHHHHHTT--EEES-TTS--SSS-EEEE-SSH--HHHHHHHHHHHH
T ss_pred ----HHHhHH---hhc----hHHHHHHHHHHHHHHHHHHHcC-CcCCCCCCCCCCceEEEEECCCH--HHHHHHHHHHHh
Confidence 111111 111 3455556666666777778887 99886542 333 445666321 123456666655
No 383
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.70 E-value=3.5e-05 Score=85.05 Aligned_cols=339 Identities=12% Similarity=-0.003 Sum_probs=175.8
Q ss_pred hHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 010897 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (498)
Q Consensus 69 ~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~ 148 (498)
.|++.+++.+.+++..+.... ....+-..++.+.|.++.+-+. ...+.++++||+|+-.|++.+++.+...+
T Consensus 384 ~p~I~~Ai~~Qa~rl~hv~~~-~~~hepa~~LAe~L~~~~~~~~----l~rVffs~sGSeAvE~AlKmA~r~y~~~~--- 455 (817)
T PLN02974 384 QPELARAVAYAAGRYGHVMFP-ENVHEPALRAAELLLGGPGKGW----ASRVFFSDNGSTAIEVALKMAFRKFIVDH--- 455 (817)
T ss_pred CHHHHHHHHHHHhhCCccccC-ccCCHHHHHHHHHHHhccCCCC----CCEEEECCchHHHHHHHHHHHHHHHHHhc---
Confidence 688999999888874432211 1122222345555666433110 12489999999999999999976543321
Q ss_pred CCCC-----------CCcEEEE-cCCchhHHHHHHHHcCCe--------------eEEEEec-------------CCccc
Q 010897 149 GKPY-----------DKPNIVT-GANVQVCWEKFARYFEVE--------------LKEVKLE-------------EGYYV 189 (498)
Q Consensus 149 g~~~-----------~~~~Iv~-s~~~h~~~~~~~~~~g~~--------------~~~v~~~-------------~~~~~ 189 (498)
|.+. ++.+||. ....|....-+....|.. ...++.. +..+.
T Consensus 456 G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~ 535 (817)
T PLN02974 456 GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFS 535 (817)
T ss_pred CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccc
Confidence 2110 2445664 444555444333333210 0011100 00000
Q ss_pred ----------------cC------------HHHHHHHhhh-------CCeEEEEeec--cCCcccccC----HHHHHHHH
Q 010897 190 ----------------MN------------PVKAVELVDE-------NTICVAAILG--STLTGEFED----VKLLHDLL 228 (498)
Q Consensus 190 ----------------~d------------~~~L~~~i~~-------~t~~v~~~~~--~t~tG~~~~----l~~I~~la 228 (498)
.| .+.+++.|.. +..+-++.-| ...-|.+.| +++|.++|
T Consensus 536 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc 615 (817)
T PLN02974 536 SGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615 (817)
T ss_pred ccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 01 2456666642 2333333444 233366533 68899999
Q ss_pred HHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccCCCC-CCeEEEEEeCCCCCCcccccccCc
Q 010897 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINY 306 (498)
Q Consensus 229 ~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l~~p-~g~g~~~~~~~~~l~~~~~~~~~y 306 (498)
+++ |++++.|+++.||.- ......++ +++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+.- ..-
T Consensus 616 ~~~------gilLI~DEV~TGfGR--tG~~fa~e~~gv-~PDIi~~--gKgLtgG~~Plaa~l~~~~-I~-~~f~~-~~~ 681 (817)
T PLN02974 616 RSR------KIPVIFDEVFTGLWR--LGVESAWELLGC-KPDIACY--AKLLTGGLVPLAATLATEE-VF-EAFRG-PSK 681 (817)
T ss_pred HHh------CCEEEEeecccCCCc--ccchhhHHhcCC-CCCEEee--cccccCCCCccEEEEEcHH-HH-Hhhcc-ccc
Confidence 999 999999999988731 11111111 122 2566655 3665555 46788887643 11 11110 000
Q ss_pred cCCCCCCccccCCCchHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHH----hcCCCeEEeeCCCCccEEEEEec
Q 010897 307 LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGL----EKTGRFEILSKDVGVPLVAFSLK 381 (498)
Q Consensus 307 l~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g-~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~~v~f~~~ 381 (498)
........| ++-++....+..++|+.+.+++ +....++..++..++.+.| .+.+.+.=+.. ..-+..+.+.
T Consensus 682 ~~~~~hg~T--y~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg--~Gl~~~iel~ 757 (817)
T PLN02974 682 LDALLHGHS--YTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVS--LGTVLALELD 757 (817)
T ss_pred cCCcccCCC--CCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEe--eeeEEEEEEe
Confidence 000001112 3333455666667777765543 3344455555555555444 34442221111 2345556664
Q ss_pred CCC---CCC---HHHHHHHHH-hcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 382 DSS---AHT---VFEISEGLR-KFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 382 ~~~---~~~---~~~l~~~L~-~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
.+. .++ ...+.+.+. ++|++++.. .+++|+..-..+++++++++++.|.+.+
T Consensus 758 ~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~--------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 758 AEGSGSGYSSLYARSVVRRLRREDGIYARPL--------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred cCCcccccchHHHHHHHHHHHHhCCEEEEec--------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 321 111 246778888 999887531 1468887667789999998888887654
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.70 E-value=1.8e-08 Score=98.56 Aligned_cols=162 Identities=17% Similarity=0.169 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh------HHHHHHH
Q 010897 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFAR 172 (498)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~------~~~~~~~ 172 (498)
.+.+.++.++|.+. ..++++...|+++++.++... .+|++|.-.-+ .+....+
T Consensus 51 ~v~~ll~~ltgAea-------A~VvNnnaAAv~L~l~~la~~--------------~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA-------ALVVNNNAAAVLLALNTLAKG--------------KEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc-------ccccccccccccccccccccc--------------cccccccccccccccccccccccc
Confidence 45667899999975 778888888888887766432 25766654322 3555677
Q ss_pred HcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCc--ccc--cCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT--GEF--EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 173 ~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~t--G~~--~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
..|+.+++|-.+. .-.+++.+++|+++|.++.-.+.+|+. |.. -+++++.+++++| ++++++|.+.|
T Consensus 110 ~sGa~lvEVGttN---~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~------~lp~i~DlgsG 180 (367)
T PF03841_consen 110 QSGARLVEVGTTN---RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEH------GLPVIVDLGSG 180 (367)
T ss_dssp ------------------------------------------------------HHHHHHHHH------T--EEEE-TTH
T ss_pred ccccccccccccc---ccccccccccccccccccccccccccccccccccccHHHHHHHHhhc------CCcEEEECCCC
Confidence 7899988888753 356788999999999999889988883 322 3799999999999 99999999998
Q ss_pred cccc--ccc-CCCC-ccccCCCCeeEEEEcCCccCCCCCCeEEEEEe
Q 010897 249 GFIA--PFL-YPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (498)
Q Consensus 249 g~~~--~~~-~~~~-~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~ 291 (498)
.+.- ++. .++. .+.+-..++|.+++|+-|.+++|. .|+++=|
T Consensus 181 ~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gk 226 (367)
T PF03841_consen 181 LLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGK 226 (367)
T ss_dssp HHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEE
T ss_pred CCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeC
Confidence 7641 111 1111 122223579999999999998877 6877754
No 385
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.58 E-value=9.8e-06 Score=81.32 Aligned_cols=256 Identities=15% Similarity=0.014 Sum_probs=136.7
Q ss_pred CChHHHHHHHHHHhccCCCCCcCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 010897 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (498)
Q Consensus 67 ~~~~~~~~~l~~~~~~n~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~ 146 (498)
+.+|.+.+++.+.++....... .........++.++|.++++-.. ....++++|+||+..|++.++..+. .+.
T Consensus 32 h~~p~i~~ai~~~~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~Alkla~~~~~-~~~ 104 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKLNYVSF-SGFTHPEAAELAEKLAELFPGGL-----DRVFFANSGSEAVEAALKLARQYHN-KRA 104 (339)
T ss_dssp BT-HHHHHHHHHHHHHCSSCST-TTSEEHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHH-HTH
T ss_pred CCccccchhHHHHhhhcccccc-cceeccchhhhhhhhhhcccccc-----ceeeeccCchHHHHHHHHHhhcccc-ccc
Confidence 3468888888888776433221 11222334467777888883221 3499999999999999999983322 211
Q ss_pred hcCCCCCCcEEEEcC-CchhHHHHHHHHcC------------CeeEEEEecCCccc-----cCHHHHHHHh----hhCCe
Q 010897 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEGYYV-----MNPVKAVELV----DENTI 204 (498)
Q Consensus 147 ~~g~~~~~~~Iv~s~-~~h~~~~~~~~~~g------------~~~~~v~~~~~~~~-----~d~~~L~~~i----~~~t~ 204 (498)
..| +.+|+.-. ..|....-+....+ -.+..+|..+. .. -..+.+++.+ .++..
T Consensus 105 ~~~----r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ia 179 (339)
T PF00202_consen 105 YTG----RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIA 179 (339)
T ss_dssp HHT----TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred ccC----CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEE
Confidence 222 34666544 55553333333221 12566665431 11 0112233322 23344
Q ss_pred EEEEeeccCCccccc----CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccc-cCCCCeeEEEEcCCccC
Q 010897 205 CVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYG 279 (498)
Q Consensus 205 ~v~~~~~~t~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~-~~~~~~dsi~~s~hK~l 279 (498)
+|++--.....|.+. =+++|.++|+++ |+++++|+++.|+.- ...-.... +++ ..|.++++ |.+
T Consensus 180 avivEPi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tG~gR--tG~~~a~~~~gv-~PDiv~~g--K~l 248 (339)
T PF00202_consen 180 AVIVEPIQGEGGMIPPPPEYLRELRELCREH------GILLIADEVQTGFGR--TGKFFASEHYGV-DPDIVTFG--KGL 248 (339)
T ss_dssp EEEEESSBTTTTSBEE-TTHHHHHHHHHHHT------T-EEEEEETTTTTTT--TSSSSGHHHHTS-SSSEEEEE--GGG
T ss_pred EEEEeccccccCccccccchhhehccccccc------ccceecccccccccc--cCCccceecccc-cCcccccc--cch
Confidence 555544444445542 268999999999 999999999988631 11111111 222 25888886 877
Q ss_pred CCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010897 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (498)
Q Consensus 280 ~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 359 (498)
.++..+|.++.+.+ .. +.+ .... ...| +..+.....+..+.|+.+..+.+. ++..++.++|.+.|+
T Consensus 249 ~gG~p~sav~~~~~-i~-~~~--~~~~-----~~~T--~~g~p~~~aaa~~~l~~~~~~~~~---~~~~~~g~~l~~~L~ 314 (339)
T PF00202_consen 249 GGGLPISAVLGSEE-IM-EAF--QPGS-----HGST--FGGNPLSCAAALATLEILEEEDLL---ERVRELGERLREGLR 314 (339)
T ss_dssp GTTSSEEEEEEEHH-HH-TTS--CTTS-----STCT--TTT-HHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred hhhhhcccccccch-hh-ccc--cccc-----cccc--cccchHhhhhhhhHHHhhccHHHH---HHHHHHHHHHHHHHH
Confidence 77788898887753 11 110 0000 1111 222235566666777766665443 344444555544444
No 386
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.53 E-value=2e-06 Score=85.44 Aligned_cols=196 Identities=13% Similarity=0.146 Sum_probs=135.9
Q ss_pred CcEEEEcCCchhHH-HHHHHHcCCeeEEEEe--c-CC---ccccCHHHHHHHhhh------CCeEEEEeeccCCcccccC
Q 010897 154 KPNIVTGANVQVCW-EKFARYFEVELKEVKL--E-EG---YYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED 220 (498)
Q Consensus 154 ~~~Iv~s~~~h~~~-~~~~~~~g~~~~~v~~--~-~~---~~~~d~~~L~~~i~~------~t~~v~~~~~~t~tG~~~~ 220 (498)
.|.+|+++..|... ..+|+-+|+..+.+.. + +. .++||.-.+++.|++ +|.+++...|++-.|..|-
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 57999999999854 4578889987444332 2 21 148999999999986 3567777889999999999
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCcccc--CCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCc
Q 010897 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (498)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~--~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~ 298 (498)
+-.|.++|++++ ..|+|.-|- .++.+.+.+..... -.+.+||++++---|++.|.--=+++-|.-+
T Consensus 311 i~kildi~eaha-----kfWLHasGh---aiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPle---- 378 (838)
T KOG0630|consen 311 ILKILDICEAHA-----KFWLHASGH---AIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLE---- 378 (838)
T ss_pred HHHHHHHHHHhh-----heeEeeccc---hhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccc----
Confidence 999999999995 599997662 22222333322111 1345899999999999877543333322211
Q ss_pred ccccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeC
Q 010897 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (498)
Q Consensus 299 ~~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (498)
+|-.+...+-.+ .++ -...+.+|.++.++|...+.+++++...+.+.|.+.+.+++++++++.
T Consensus 379 ------g~aaSafesdpi-~re-kLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~ 441 (838)
T KOG0630|consen 379 ------GSAASAFESDPI-LRE-KLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGH 441 (838)
T ss_pred ------cccchhcccChH-HHH-hhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEecc
Confidence 111110000000 111 146789999999999999999999999999999999999999998764
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.50 E-value=2.1e-05 Score=80.86 Aligned_cols=347 Identities=16% Similarity=0.135 Sum_probs=185.2
Q ss_pred CCCCCHHHHHHHHHHhhhccCCC-CCcccccccCCChHHHHHHHHHH---hcc-CCCCCcCCcchHHHHHHHHHHHHHHc
Q 010897 34 DNSMPKEAAYQVINDELMLDGNP-RLNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIAHLF 108 (498)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~---~~~-n~~~~~~~~~~~~le~~~~~~la~l~ 108 (498)
..+....++++.++++...+.-- .|--.+|..+..++.+..-+.+. +.+ .++.++-+++..+..-....+++++.
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlT 176 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLT 176 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhcc
Confidence 45667888888887765432110 12122333334444333222211 111 11222223333333335678899999
Q ss_pred CCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHH----HcCCeeEEEEec
Q 010897 109 NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR----YFEVELKEVKLE 184 (498)
Q Consensus 109 g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~----~~g~~~~~v~~~ 184 (498)
|+|..+.. ..--.+-+.||+.++.+..++ -+++++...|.-....++ .+|++++..+.
T Consensus 177 GL~~aNAS--LLDEgTAaaEAm~l~~~~~kr---------------kk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~- 238 (1001)
T KOG2040|consen 177 GLPMANAS--LLDEGTAAAEAMALCNRINKR---------------KKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDI- 238 (1001)
T ss_pred CCcccchh--hhccchhHHHHHHHHHhhccc---------------ceEEecCCCCcchhhhhhccccccceeEEecCH-
Confidence 99974320 011112234555444443332 269999999985544433 34444333222
Q ss_pred CCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccC
Q 010897 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR 264 (498)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~ 264 (498)
++.. ...++...|++-.|.|. |.+.|..++.+++++. +..+++-.-. ..+-.+.|. ..|
T Consensus 239 --------~~~~-~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~------~s~vv~atDL--LaLtiLrpP--gef- 297 (1001)
T KOG2040|consen 239 --------KEAD-YSSKDVSGVLVQYPDTE-GSVLDFDELVELAHAN------GSLVVMATDL--LALTILRPP--GEF- 297 (1001)
T ss_pred --------HHhh-ccccceeEEEEEcCCCC-CcccCHHHHHHHhhcc------CceEEEeehh--hHHHccCCh--hhc-
Confidence 2111 11234566777778775 9999999999999999 7765543211 111112222 222
Q ss_pred CCCeeEEEEcCCccCCCCCCe-----EEEEEeCCC--CCCcc-cccccC----------------ccCCCCCCccccCCC
Q 010897 265 LPLVKSINVSGHKYGLVYAGV-----GWVVWRTKD--DLPDE-LVFHIN----------------YLGSDQPTFTLNFSK 320 (498)
Q Consensus 265 ~~~~dsi~~s~hK~l~~p~g~-----g~~~~~~~~--~l~~~-~~~~~~----------------yl~~~~~~~~l~~sr 320 (498)
++|+...|++.++ +|.|- |++.+++.- .++.. .....+ .+..+..+-.+ ++-
T Consensus 298 --GaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNI-CTA 373 (1001)
T KOG2040|consen 298 --GADIAVGSSQRFG-VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNI-CTA 373 (1001)
T ss_pred --CceeeeccccccC-ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhh-hHH
Confidence 5888888888876 44442 333222110 00000 000001 11111111111 111
Q ss_pred chHHHHHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhc
Q 010897 321 GSSQIIAQYYQF--IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKF 398 (498)
Q Consensus 321 ~~~~~~a~~~~l--~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~ 398 (498)
-.+++-.+++ .++|.+|++++.++....+-.|...|+..+ -++..++ -+..+-+++.. +.+++.++-.++
T Consensus 374 --QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~-fFDTLkI~~~~----s~~~~l~rA~~~ 445 (1001)
T KOG2040|consen 374 --QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKP-FFDTLKIRCGC----SAEEVLDRAAKR 445 (1001)
T ss_pred --HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhcccc-ccceEEEEecC----cHHHHHHHHHhh
Confidence 1122222222 457999999999999999999999999887 6777665 45555566632 567888888888
Q ss_pred CcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 399 GWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 399 G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
++-++.+ ..+.+-+++-+..+.++++.|+..+.
T Consensus 446 ~iNlr~~-------ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 446 QINLRLV-------EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cCceEEe-------ecCceEEeecccccHHHHHHHHHHHc
Confidence 8766543 23347788877777777776665543
No 388
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.39 E-value=1.1e-06 Score=80.92 Aligned_cols=234 Identities=15% Similarity=0.098 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHH
Q 010897 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (498)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~ 173 (498)
..+-+++..-.-.+.|+-.-. .-..+-.++| +++-+++...+.+. | +---|+.....+-+..|..--
T Consensus 56 ~~isne~a~~~i~l~glhav~-nc~vvpl~tg--mslslc~~s~r~kr---------p-kakyiiw~ridqks~~ksi~~ 122 (432)
T KOG3843|consen 56 ACISNEFAKDAIHLAGLHAVA-NCFVVPLATG--MSLSLCFLSLRHKR---------P-KAKYIIWLRIDQKSCFKSIIH 122 (432)
T ss_pred HHHHHHHHHHHHHHhhhhhhh-ceeEEecccc--ccHHHHHHHHhhcC---------C-cccEEEEEecchHHHHHHHHh
Confidence 344455555555666664311 0012222333 33445666655431 0 012678888888888888888
Q ss_pred cCCeeEEEEe--cCCccccCHHHHHHHhhhC-CeEEEEeeccCCc---ccccCHHHHHHHHHHhhcccCCCceEEEecCc
Q 010897 174 FEVELKEVKL--EEGYYVMNPVKAVELVDEN-TICVAAILGSTLT---GEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (498)
Q Consensus 174 ~g~~~~~v~~--~~~~~~~d~~~L~~~i~~~-t~~v~~~~~~t~t---G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~ 247 (498)
.|.+++.|.- +.|...-|++.+++.|.+. +.+|..++.+|.. -..|.+++|+.+|..| +++-+|..||
T Consensus 123 agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~------diphivnnay 196 (432)
T KOG3843|consen 123 AGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH------DIPHIVNNAY 196 (432)
T ss_pred cCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc------Cchhhhcccc
Confidence 8999777653 3444677899999888764 4566666666654 3448899999999999 9999999999
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCchHHHHH
Q 010897 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (498)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~~~~~a 327 (498)
|.-...-. ......-...++|.+.-|..|.+.+|.|.+++..-+...+ + .....|.+... +...+-
T Consensus 197 glqsee~i-~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~i-q--~iak~ypgras----------a~ps~d 262 (432)
T KOG3843|consen 197 GLQSEECI-HKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFI-Q--EIAKMYPGRAS----------ASPSLD 262 (432)
T ss_pred ccchHHHH-HHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHH-H--HHHHhCCCccc----------cCccHH
Confidence 86321000 0000011345688888899999999988655432111111 0 01123443322 123344
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010897 328 QYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (498)
Q Consensus 328 ~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 360 (498)
+...|..+|..+|.+...+..++--+++..|.+
T Consensus 263 llitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 263 LLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788888888777777766666555543
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.38 E-value=0.0001 Score=69.01 Aligned_cols=334 Identities=16% Similarity=0.078 Sum_probs=190.2
Q ss_pred ChHHHHHHHHHHhccCCCCC---c---CCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 010897 68 MEPECDKLVMASINKNYVDM---D---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (498)
Q Consensus 68 ~~~~~~~~l~~~~~~n~~~~---~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~ 141 (498)
|++.+.++-.+.+|-+.... + .+.....+-+.....+.+|+++|+.. -+.+--||...-+.|+..-.-.
T Consensus 19 p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~----~vlf~QGGGt~qFaAv~lNL~g- 93 (370)
T KOG2790|consen 19 PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY----KVLFLQGGGTGQFAAVPLNLIG- 93 (370)
T ss_pred CHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce----eEEEEeCCCcccccccchhhhc-
Confidence 44556676667777654432 1 23355667778888899999999753 3555544333333332111100
Q ss_pred HHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCc--cccCHHHHHHHhhhCCeEEEEeeccCCccccc
Q 010897 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGY--YVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (498)
Q Consensus 142 ~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~--~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~ 219 (498)
.+.|. .-+-||+.+-+.-+.+++.++.-...+..+..+-. -..|.+.++. +++...|+.|...|..|.-.
T Consensus 94 ----lK~g~--~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf 165 (370)
T KOG2790|consen 94 ----LKHGR--CADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEF 165 (370)
T ss_pred ----cccCC--ccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEecCceeeceec
Confidence 01121 12478888877778888766543333333333211 1245555443 33446889999888888753
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCCccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcc
Q 010897 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (498)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~ 299 (498)
|.-.+ ..|+ +.+++.|-.+-...-|+ |+ ...++|....+|.. +|.|+.++++|+. .+...
T Consensus 166 ~~~P~-----~~~~----~~vlVaDmSSnflSrpv-------Dv--sk~gvi~aGAQKN~-G~aG~Tvvivr~d-llg~~ 225 (370)
T KOG2790|consen 166 DFIPV-----NDPK----GAVLVADMSSNFLSRPV-------DV--SKFGVIFAGAQKNV-GPAGVTVVIVRKD-LLGNA 225 (370)
T ss_pred CCCCC-----CCCC----CceEEEecccchhcCCc-------cc--hhcceEEecccccc-CccccEEEEEehh-hhccc
Confidence 22111 1122 78888887665432222 22 34667888899986 6889988988864 33333
Q ss_pred cccccCccCCCC--CCccccCCCchHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC---Cc
Q 010897 300 LVFHINYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDV---GV 373 (498)
Q Consensus 300 ~~~~~~yl~~~~--~~~~l~~sr~~~~~~a~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~ 373 (498)
....+..+.... ..-++..|.+.+.+...-..++.+.. .|...+.+...+.++.+.+.|.+..+|-..+-++ +-
T Consensus 226 ~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~ 305 (370)
T KOG2790|consen 226 LDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSR 305 (370)
T ss_pred ccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhh
Confidence 333333332211 12223234444444333344444433 4567777777789999999999887776543222 34
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCcE-eeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 374 PLVAFSLKDSSAHTVFEISEGLRKFGWI-VPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~G~~-v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
..|+||+.+ ++++. ++.+.-.+++.+ +-++ ...+.+|.|+=+..+-+++++|++-|++..+
T Consensus 306 MNV~Fri~~-d~Le~-eFLkeA~~~~mv~LKGh------RSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 306 MNVPFRIEK-DELEA-EFLKEAAKEHMVQLKGH------RSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred cccceeecc-hHHHH-HHHHHHHHhhhhccccc------cccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 678899953 33443 444444444432 1111 2345599999778899999998887777654
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.25 E-value=6.3e-05 Score=72.77 Aligned_cols=298 Identities=13% Similarity=0.137 Sum_probs=145.9
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-EEEEcCCchhHHH
Q 010897 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWE 168 (498)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~-~Iv~s~~~h~~~~ 168 (498)
+-...+|++.+++ |-++.|=...+ .-.+++++|+|+.++.++.++.... .+...| +||.+.|.|++|.
T Consensus 42 ~f~s~eL~~~Ir~-LH~~VGNAvt~--gr~IV~GtGsTQL~~AalyALSp~~--------~~~~~p~~VVa~aPYY~~Y~ 110 (363)
T PF04864_consen 42 WFISPELERQIRR-LHRVVGNAVTD--GRYIVFGTGSTQLFNAALYALSPNA--------SPSSSPASVVAAAPYYSSYP 110 (363)
T ss_dssp TTS-HHHHHHHHH-HHHHH-SB--T--TSEEEEECHHHHHHHHHHHHHCHHT---------TTSSSEEEEE-SS--CHHH
T ss_pred eeccHHHHHHHHH-HHHHhcccccc--CcEEEEcCCHHHHHHHHHHhcCCCC--------CCCCCCceeEecCCCccchH
Confidence 4455677766555 45556544322 3569999999999988888774430 111233 8999999999999
Q ss_pred HHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 169 ~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
....++.-..-...-+...|. +- =+..+.+=++|.||||.|.+-. .+++.- +..++.|-||-
T Consensus 111 ~qt~~f~s~~y~w~Gda~~~~-~~------~~~~~~IElVTSPNNPDG~lr~-----~V~~g~------~~k~I~D~AYY 172 (363)
T PF04864_consen 111 EQTDFFDSRLYKWAGDASNFK-NS------DNPSPYIELVTSPNNPDGQLRE-----AVLNGS------SGKVIHDLAYY 172 (363)
T ss_dssp HHCCCT-BTTEEEEEECCCGT-T-------S-CCGEEEEEESS-TTT-----------SSTTT------EEEEEEE-TT-
T ss_pred HHHHhccccCccccccHHhhc-cC------CCCCCeEEEEeCCCCCcccccc-----hhcCCC------Ccceeeeeeee
Confidence 988777655445544433332 11 0123455567999999998731 122223 67789999997
Q ss_pred cccccccCCCCccccCCCCeeEEEEcCCc-cCCCCCCeEEEEEeCCCCCCcccccccCccCCCCCCccccCCCch-HHHH
Q 010897 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS-SQII 326 (498)
Q Consensus 249 g~~~~~~~~~~~~~~~~~~~dsi~~s~hK-~l~~p~g~g~~~~~~~~~l~~~~~~~~~yl~~~~~~~~l~~sr~~-~~~~ 326 (498)
.. .+.|-.. --.=|.+.++..| .|.++.+.||.++++++...+. ..|+.-. + +--|+-. ..++
T Consensus 173 WP---hyTpI~~----~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln--T--iGvS~dsQLRa~ 237 (363)
T PF04864_consen 173 WP---HYTPITA----PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN--T--IGVSRDSQLRAL 237 (363)
T ss_dssp ST---TTS---S-----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH--C--SS--HHHHHHHH
T ss_pred cc---cccccCC----CCCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh--c--ccCcHHHHHHHH
Confidence 63 3433211 0124677777777 5777888999999987543221 1222110 0 0012210 1222
Q ss_pred HHHHHH-HHhcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEeeCCC------------CccEEEEEecCCCCCCH
Q 010897 327 AQYYQF-IRLGFE-----GYKNIMENCMGNARALREGLEKTGRFEILSKDV------------GVPLVAFSLKDSSAHTV 388 (498)
Q Consensus 327 a~~~~l-~~lg~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~------------~~~~v~f~~~~~~~~~~ 388 (498)
++.-++ ...+.+ -+.--.+...+.-+.|.+.+.+...|.+-.-++ ...+-.++...+...|
T Consensus 238 kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~D- 316 (363)
T PF04864_consen 238 KILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDED- 316 (363)
T ss_dssp HHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSS-
T ss_pred HHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccccc-
Confidence 222222 222221 122222333445566777787777776643221 1223333554322233
Q ss_pred HHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHH
Q 010897 389 FEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIE 438 (498)
Q Consensus 389 ~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~ 438 (498)
-...|++.||+-+....- ..+..+.|+|+.. +.++.+.|++.|.
T Consensus 317 --C~~~l~~~~I~tr~G~~f--ga~~ryVRlSml~--~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 317 --CYAVLREAKIITRSGVLF--GADSRYVRLSMLK--RDDDFDQLLERLS 360 (363)
T ss_dssp --HHHHHHCTTEEEEEGGGG--TS-TTEEEEESSS---HHHHHHHHHHHH
T ss_pred --HHHHHHhCCcccCCCCcc--CCCCCeEEEeccC--CHHHHHHHHHHHH
Confidence 445567788776654322 2346789999853 5566666665554
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.12 E-value=0.0013 Score=62.55 Aligned_cols=289 Identities=15% Similarity=0.140 Sum_probs=163.5
Q ss_pred HcCCCCCC--CCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCe-eEEEEe
Q 010897 107 LFNTPVAD--DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKL 183 (498)
Q Consensus 107 l~g~~~~~--~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~-~~~v~~ 183 (498)
++|.+++. ++...++-+-+||.|+.++.--+. .+.+ +-.|++|.|++......++..|.. +...+.
T Consensus 87 ~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~-~~~~----------~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~y 155 (410)
T KOG1412|consen 87 LLGADSPAIKEDRVFGVQSLSGTGALRIAADFLA-TFYN----------KNTVYVSNPTWENHHAIFEKAGFTTVATYPY 155 (410)
T ss_pred hcCCCchhhhhccccceeeccccchhhhhHHHHH-Hhcc----------cceeEecCCchhHHHHHHHHcCCceeeeeee
Confidence 46766543 233567888899999977665443 3332 236999999999999999999954 444443
Q ss_pred -cCCccccCHHHHHHHhhhCCe--EEEEe-eccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccC
Q 010897 184 -EEGYYVMNPVKAVELVDENTI--CVAAI-LGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (498)
Q Consensus 184 -~~~~~~~d~~~L~~~i~~~t~--~v~~~-~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~ 256 (498)
+.+.-.+|.+.+...|...|. .+++. ...||||.= +.+.+|+++.++. +.+...|-||-||+- ..
T Consensus 156 Wd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k------~lf~fFDiAYQGfAS--GD 227 (410)
T KOG1412|consen 156 WDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK------NLFPFFDIAYQGFAS--GD 227 (410)
T ss_pred ecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc------Cceeeeehhhccccc--CC
Confidence 223357999988888876552 22222 247899864 5677899999999 899999999998863 11
Q ss_pred CCC-ccccC---CCCe-eEEEEcCCccCCC-CCCeEE--EEEeCCCCCCcccc-----cccCccCCCCCCccccCCCch-
Q 010897 257 PDL-EWDFR---LPLV-KSINVSGHKYGLV-YAGVGW--VVWRTKDDLPDELV-----FHINYLGSDQPTFTLNFSKGS- 322 (498)
Q Consensus 257 ~~~-~~~~~---~~~~-dsi~~s~hK~l~~-p~g~g~--~~~~~~~~l~~~~~-----~~~~yl~~~~~~~~l~~sr~~- 322 (498)
++. .|-.+ ..+. -+++-|.-|.++- ..++|- ++++++...+.... .+.+|-. .+.+ |.|-.
T Consensus 228 ~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN--PPAy---GArIV~ 302 (410)
T KOG1412|consen 228 LDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN--PPAY---GARIVH 302 (410)
T ss_pred ccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCC--Ccch---hhHHHH
Confidence 111 12111 1223 4566677775433 333443 33344443221100 0111100 0000 11111
Q ss_pred -----HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEeeCCCCccEEEEEecCCCCCCHHHHHHH
Q 010897 323 -----SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG--R-FEILSKDVGVPLVAFSLKDSSAHTVFEISEG 394 (498)
Q Consensus 323 -----~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~ 394 (498)
+....+| ...++.+..+..+++..|++.|..++ | +.-+. .+.++++|. ++++..+ +.
T Consensus 303 kvL~tP~lre~W-------~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~--~QiGMFSyT-----GLtp~qV-~~ 367 (410)
T KOG1412|consen 303 KVLSTPELREQW-------IQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHIT--QQIGMFSYT-----GLTPAQV-DH 367 (410)
T ss_pred HHhcCHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH--hhccceeec-----CCCHHHH-HH
Confidence 1112222 33456777888889999999998775 1 11111 145555553 3566454 55
Q ss_pred HHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q 010897 395 LRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 445 (498)
Q Consensus 395 L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~ 445 (498)
|.++..+ |..+. =|+++..- ....+|.+.++|.+++..+.
T Consensus 368 li~~h~v---yLl~~-------GRInisGL-N~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 368 LIENHKV---YLLSD-------GRINISGL-NMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred HHHhceE---EEecC-------CcEeeecc-ccccHHHHHHHHHHHHHhhc
Confidence 5554433 22221 27777543 44567777777777776543
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.87 E-value=0.00012 Score=68.99 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=101.9
Q ss_pred HHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEE-EEcCCchhHHHHH----------
Q 010897 102 NMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNI-VTGANVQVCWEKF---------- 170 (498)
Q Consensus 102 ~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~I-v~s~~~h~~~~~~---------- 170 (498)
+-.|+.||.+.. ..-.-..+||.|+-.|+....++ ++++ ++.-.-|-.++..
T Consensus 72 ~vyA~vf~aE~a----~VRpq~isGTHAI~~aLfg~LRp-------------gDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 72 RVYAQVFGAEAA----LVRPQIISGTHAIACALFGILRP-------------GDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred HHHHHHhccccc----eeeeeeecchhHHHHHHHhccCC-------------CCeEEEecCCcchhHHHHhccCCCCccc
Confidence 348899999752 22223346899999898887764 3444 3333333344433
Q ss_pred HHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeecc----CCcccccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS----TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 171 ~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~----t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
.+-+|++.+.||+..+ +.+|.+.+.+.|+++|++|.+.-.. -|.=.+++++++..+.|+.|. ++.+.||.+
T Consensus 135 L~dfgi~Y~~v~Lt~~-gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp----n~ivFVDNC 209 (416)
T COG4100 135 LKDFGIKYKAVPLTAD-GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP----NVIVFVDNC 209 (416)
T ss_pred HHHhCcceeecccccC-CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC----CEEEEEecc
Confidence 2335778899999875 7899999999999999988665332 233445778888888887643 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCCccC
Q 010897 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (498)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~~~dsi~~s~hK~l 279 (498)
||.|+.. .-|. .-++|.+..|.-|.-
T Consensus 210 YGEFvE~-~EPt------~vGaDliAGSLIKNp 235 (416)
T COG4100 210 YGEFVEE-KEPT------HVGADLIAGSLIKNP 235 (416)
T ss_pred chhhhhc-cCcc------ccchhhhccceeeCC
Confidence 9998731 1111 126888888888853
No 393
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.61 E-value=0.0052 Score=58.22 Aligned_cols=290 Identities=13% Similarity=0.078 Sum_probs=153.3
Q ss_pred cceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHc------CC---eeEE---EEecC
Q 010897 118 AVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF------EV---ELKE---VKLEE 185 (498)
Q Consensus 118 ~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~------g~---~~~~---v~~~~ 185 (498)
....|+++|||||-+|++.+++-. ..++.|.+.-..|.-+....+.. |- ++.+ .|+.+
T Consensus 103 svc~F~NSGSEANDLALRLAR~ft----------khqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPD 172 (452)
T KOG1403|consen 103 SVCFFVNSGSEANDLALRLARNFT----------KHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPD 172 (452)
T ss_pred eEEEEecCCchhhHHHHHHHHhhc----------ccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcc
Confidence 359999999999999999987641 12467777766665333222221 11 1222 23321
Q ss_pred ---Ccc--------ccC---HHHHHHHhhh---CC---eEEEEeeccCCcccccC----HHHHHHHHHHhhcccCCCceE
Q 010897 186 ---GYY--------VMN---PVKAVELVDE---NT---ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPI 241 (498)
Q Consensus 186 ---~~~--------~~d---~~~L~~~i~~---~t---~~v~~~~~~t~tG~~~~----l~~I~~la~~~~~~~~~~~~l 241 (498)
+.+ .++ .+.+++.+++ +- .+.++-+-..--|.+-| ++.+++..+.+ |-..
T Consensus 173 vyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a------GGv~ 246 (452)
T KOG1403|consen 173 VYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA------GGVC 246 (452)
T ss_pred ccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC------CCeE
Confidence 001 111 1334444443 11 11222222222355544 45677777777 8999
Q ss_pred EEecCcccccccccCCCCccccCCCC--eeEEEEcCCccCCCCCCeEEEEEeCCCCCCccccc-ccCccCCCCCCccccC
Q 010897 242 HVDAASGGFIAPFLYPDLEWDFRLPL--VKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNF 318 (498)
Q Consensus 242 ~vD~A~~g~~~~~~~~~~~~~~~~~~--~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~~~~-~~~yl~~~~~~~~l~~ 318 (498)
+.|+++-||-- ....-|.|+.-+ -|++++ -|-++.+..++.+..+. + +.+.+.. ...|+... |
T Consensus 247 IaDEVQvGFGR---vG~hyWafq~y~fiPDIVtm--gKpmGNGhPVa~Vattk-e-IA~Af~atgv~YFNTy-------G 312 (452)
T KOG1403|consen 247 IADEVQVGFGR---VGSHYWAFQTYNFIPDIVTM--GKPMGNGHPVAAVATTK-E-IAQAFHATGVEYFNTY-------G 312 (452)
T ss_pred Eeehhhhcccc---cchhhhhhhhhccccchhee--cccCCCCCeeeEEeccH-H-HHHHhccccceehhcc-------C
Confidence 99999987641 122335553222 233332 34444555566666443 2 2222221 22343321 2
Q ss_pred CCchHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeeCCCCcc-EEEEEecCC-C-----CCCHHH
Q 010897 319 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVP-LVAFSLKDS-S-----AHTVFE 390 (498)
Q Consensus 319 sr~~~~~~a~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~-~-----~~~~~~ 390 (498)
..+ .......+.|+.+.++ +..++..+...+|...|+++. ..+++.+-.+.+ |+-+.+..+ . ...+..
T Consensus 313 GnP-VsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~ 388 (452)
T KOG1403|consen 313 GNP-VSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHW 388 (452)
T ss_pred CCc-hhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHH
Confidence 222 2333344555555554 445666677777777776543 256666533333 334444321 1 112345
Q ss_pred HHHHHHhcC-cEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHc
Q 010897 391 ISEGLRKFG-WIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 446 (498)
Q Consensus 391 l~~~L~~~G-~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~ 446 (498)
+..+|++.. +.+++ +..+.++|.+----.|+++.++.++..|++++-.+++
T Consensus 389 ~v~rlke~y~VLlsa-----DGPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 389 VVNRLKELYRVLLSA-----DGPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred HHHHHHHhhhEEEec-----CCCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 667777764 54433 3456777887655578999999999999999876653
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.56 E-value=0.0015 Score=62.94 Aligned_cols=274 Identities=18% Similarity=0.147 Sum_probs=151.1
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEe-cCCccccCHHHHHHH
Q 010897 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVEL 198 (498)
Q Consensus 120 ~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~L~~~ 198 (498)
.+-|-+||.|+-++..-+.+-+ ....|++|+|++....+.-...|+.+....- ++.+..+|.+.+-+.
T Consensus 123 tvQ~lSGTGaLriga~Fl~~f~-----------~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~led 191 (427)
T KOG1411|consen 123 TVQTLSGTGALRVGAEFLARFY-----------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLED 191 (427)
T ss_pred EEEeccCcchhhHHHHHHHhhc-----------cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHH
Confidence 3444478888765554433322 1237999999999888888888998877665 334467898876666
Q ss_pred hhhCC---eEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcccccccccCCCC-c-ccc-CCCCee
Q 010897 199 VDENT---ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVK 269 (498)
Q Consensus 199 i~~~t---~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~~~~~~~~~-~-~~~-~~~~~d 269 (498)
+.+.+ .+++=....||||.= +.+++|.++.++. +.+-+.|.||-||...-+..+- . ..| ...+--
T Consensus 192 l~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k------~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~ 265 (427)
T KOG1411|consen 192 LGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK------NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEI 265 (427)
T ss_pred HhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc------cccchhhhhhcccccCCchhhHHHHHHHHHcCCce
Confidence 65432 333333467888864 6678899999999 8999999999998632111110 0 001 111223
Q ss_pred EEEEcCCccCCC-CCCeEEE--EEeCCCCCCcc-----cccccCccCCCCCCccccCCCchHH------HHHHHHHHHHh
Q 010897 270 SINVSGHKYGLV-YAGVGWV--VWRTKDDLPDE-----LVFHINYLGSDQPTFTLNFSKGSSQ------IIAQYYQFIRL 335 (498)
Q Consensus 270 si~~s~hK~l~~-p~g~g~~--~~~~~~~l~~~-----~~~~~~yl~~~~~~~~l~~sr~~~~------~~a~~~~l~~l 335 (498)
.++-|.-|.++- +.++|.+ ++.+.+...+. ...++-|- +.-+.|.|-... +..+|
T Consensus 266 ~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYS-----nPP~hGArIv~~Il~d~~l~~~W------ 334 (427)
T KOG1411|consen 266 LLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYS-----NPPLHGARIVATILSDPDLKNQW------ 334 (427)
T ss_pred EeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhccccc-----CCCccchhhhhhccCChHHHHHH------
Confidence 345566665432 3334444 22332211000 00111221 111223333222 23344
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCC
Q 010897 336 GFEGYKNIMENCMGNARALREGLEKTGR---FEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAE 412 (498)
Q Consensus 336 g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~ 412 (498)
......+.++++.+++.|.+.|++.+- +.-+.+ +.+.+||. +++.+++ +.|.++-.+ |.. .
T Consensus 335 -~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~--QIGMF~fT-----gl~peQv-~~l~ke~~i---YmT----~ 398 (427)
T KOG1411|consen 335 -LGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITK--QIGMFCFT-----GLNPEQV-DWLTKEYHI---YLT----K 398 (427)
T ss_pred -HHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHH--hhheeeec-----CCCHHHH-HHHHhhhee---eec----c
Confidence 233456778888899999999988762 111222 56788875 2565444 555544333 211 1
Q ss_pred CeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 413 NVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 413 ~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
+ -|+|+.. .+...+..|.++|..+.
T Consensus 399 d---GRiS~aG-~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 399 D---GRISMAG-LSSSNVPYLADAIHAVT 423 (427)
T ss_pred C---ceEeecc-ccccCCcccchhhHhHh
Confidence 1 4888743 34455666666665543
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.0084 Score=58.15 Aligned_cols=212 Identities=14% Similarity=0.165 Sum_probs=114.7
Q ss_pred HHHHHHHhhh-----CCeEEEEeecc-----CCcccccCHHHHHHHHHHhhcccCCCceEEEecCccc-cccc-ccCCCC
Q 010897 192 PVKAVELVDE-----NTICVAAILGS-----TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG-FIAP-FLYPDL 259 (498)
Q Consensus 192 ~~~L~~~i~~-----~t~~v~~~~~~-----t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g-~~~~-~~~~~~ 259 (498)
++.++++|.. +|.+-+++-|- -..+.-+-+..+.+++++| ++.++||+++.| +..+ |...+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh------~v~fivDEVQTGgGaTGk~WaHe- 327 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------GVAFIVDEVQTGGGATGKFWAHE- 327 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc------CeEEEeeeeecCCCccCceeeeh-
Confidence 4556666653 24433333322 2234556689999999999 999999999944 3321 11111
Q ss_pred ccccCCCCeeEEEEcCCccCCCCCCeEEEEEeCCCCCCcc-cccccCccCCCCCCccccCCCchHHHHHHHHHHHHhcHH
Q 010897 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE-LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (498)
Q Consensus 260 ~~~~~~~~~dsi~~s~hK~l~~p~g~g~~~~~~~~~l~~~-~~~~~~yl~~~~~~~~l~~sr~~~~~~a~~~~l~~lg~~ 338 (498)
.|.+..+ .|.+++| .|+..+ |++ -+.+..+.. ++..-.|+|. ....+-+-..+..+.++
T Consensus 328 hw~l~~P-pD~vTFS-KK~q~g----Gff--h~~~frpn~pYrifNTWmGd------------P~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 328 HWNLDSP-PDVVTFS-KKFQTG----GFF--HDEEFRPNEPYRIFNTWMGD------------PSKNLLLEEVVQEIKRE 387 (484)
T ss_pred hcCCCCC-ccceehh-hhhhcC----ccc--cCcccCCCchHHHhhhhcCC------------hHHHHHHHHHHHHHhHH
Confidence 2333222 6776654 666532 222 233222221 1111122221 12334344445555454
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCcEeeeecCCCCCCCe
Q 010897 339 GYKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENV 414 (498)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~ 414 (498)
+ .++++....++|...|.+ .|+. +-.-..+..|++|.++.. .-...+...++-+|+.+-+. +.
T Consensus 388 ~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~~~~RGrGTF~a~d~ps~--~~Rdk~i~~~~~nGv~~GGC-------g~ 454 (484)
T KOG1405|consen 388 D---LLNNVAHVGKALLKGLLELQAKYPGK-INNLRGRGTFIAWDCPSG--SIRDKLILIARLNGVNLGGC-------GD 454 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhCchh-hhcccccceEEEEeCCCh--HHHHHHHHHHHHcCceeccc-------cc
Confidence 3 455566666777666654 3432 111112567899998643 23458888899999875332 23
Q ss_pred eEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 010897 415 AVLRVVVREDFSRSLVERLISHIEEVLKE 443 (498)
Q Consensus 415 ~~lRv~v~~~~t~~~~~~l~~~l~~~l~~ 443 (498)
..+|+--+--|+....+-+++.+.++++.
T Consensus 455 ~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 455 KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 34666554556777788888888887753
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.76 E-value=0.075 Score=46.60 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=50.1
Q ss_pred CcCCcchHHHHHHHHHHHHHHcC--CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCch
Q 010897 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (498)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h 164 (498)
|..+.+..++++++.+++.+.+| .+.+. ..+++|+|+++++.+++.++.++ ++.|++++++|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p---d~Ivvt~Ga~~al~~l~~~l~dp-------------GD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDA---DMIVLSAGATAANEIIMFCIADP-------------GDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccch---hheEEcCCHHHHHHHHHHHHcCC-------------CCEEEEeCCCC
Confidence 44566888999999999999988 33322 24999999999999888887653 57899999887
Q ss_pred h
Q 010897 165 V 165 (498)
Q Consensus 165 ~ 165 (498)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 4
No 397
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=65.09 E-value=16 Score=35.66 Aligned_cols=83 Identities=19% Similarity=0.029 Sum_probs=55.1
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHh
Q 010897 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (498)
Q Consensus 120 ~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i 199 (498)
++=.++|+-++-+|+.+..+-+ +-.+++|+..-..-.+..+.+|++++.+|-.++...=-.++++++.
T Consensus 65 IVE~TSGNTGI~LA~vaa~~Gy------------~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~ 132 (300)
T COG0031 65 IVEATSGNTGIALAMVAAAKGY------------RLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA 132 (300)
T ss_pred EEEcCCChHHHHHHHHHHHcCC------------cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence 6666777888888887765432 3477888877778888899999999999974431212234555566
Q ss_pred hhCCe-EEEEeeccCC
Q 010897 200 DENTI-CVAAILGSTL 214 (498)
Q Consensus 200 ~~~t~-~v~~~~~~t~ 214 (498)
.+.+- ++..++=.|+
T Consensus 133 ~~~p~~~~~~~Qf~Np 148 (300)
T COG0031 133 AEIPGYAVWLNQFENP 148 (300)
T ss_pred HhCCCceEchhhcCCC
Confidence 65544 5655444444
No 398
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=63.92 E-value=11 Score=33.26 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=39.8
Q ss_pred CHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccc
Q 010897 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (498)
Q Consensus 191 d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g 249 (498)
|..++++++..+...+++. +|.+.+++++.+++++.++ .+++|||-..|-
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK----~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGK----TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCc----EEEEEeHHhccc
Confidence 4567888888877766655 4667799999999999855 789999987764
No 399
>PRK11633 cell division protein DedD; Provisional
Probab=59.55 E-value=22 Score=33.23 Aligned_cols=53 Identities=26% Similarity=0.412 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 386 HTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 386 ~~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
.+...|..+|+..|+-. |+.+....+..+.||-++.+.++++.++....|+++
T Consensus 161 ~~A~~l~~kL~~~G~~A--y~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRV--YTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCee--EEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 45789999999999764 443332233356799999999998887766666543
No 400
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=56.33 E-value=21 Score=32.45 Aligned_cols=37 Identities=14% Similarity=0.006 Sum_probs=30.6
Q ss_pred CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 203 t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
..+|+++-|+|..|.++|.+.-++++++. |+.+|.=+
T Consensus 113 kvvILLTDG~n~~~~i~P~~aAa~lA~~~------gV~iytIg 149 (191)
T cd01455 113 AIVIVLSDANLERYGIQPKKLADALAREP------NVNAFVIF 149 (191)
T ss_pred cEEEEEeCCCcCCCCCChHHHHHHHHHhC------CCEEEEEE
Confidence 36678899999999999998778999999 88876544
No 401
>cd06927 RNAP_L L subunit of Archaeal RNA polymerase. The archaeal L subunit of RNA polymerase (RNAP) is involved in the assembly of RNAP subunits. RNAP is a large multi-subunit complex responsible for the synthesis of RNA. It is the principal enzyme of the transcription process, and is a final target in many regulatory pathways that control gene expression in all living cells. A single distinct RNAP complex is found in archaea, which may be responsible for the synthesis of all RNAs. The archaeal RNAP harbors homologues of all eukaryotic RNAP II subunits with two exceptions (RPB8 and RPB9). The 12 archaeal subunits are designated by letters and can be divided into three functional groups that are engaged in: (I) catalysis (A'/A", B'/B" or B); (II) assembly (L, N, D and P); and (III) auxiliary functions (F, E, H and K). The assembly of the two largest archaeal RNAP subunits that provide most of the enzyme's catalytic functions depends on the presence of the archaeal D/L heterodimer.
Probab=50.41 E-value=1.2e+02 Score=23.50 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=42.6
Q ss_pred EEeeCCCCccEEEEEecCCCCCC-HHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 365 EILSKDVGVPLVAFSLKDSSAHT-VFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+++.. .-+...|.+.+.+ .+ ...|...|.+ .++.+.+|..|-...+.-.+||-+....+.. +.+.++++.+.+
T Consensus 2 kvi~~--~~n~~~~~i~~ED-HTlgNlLr~~L~~~~~V~fAgY~vpHPl~~~~~lrIqT~~~~~p~--~al~~a~~~l~~ 76 (83)
T cd06927 2 KVIEK--EDNELELEIEGED-HTLLNLLKEELLRDPGVKVASYDIEHPLLSNPVLKIKTDGGVDPL--EALKEAAKRLID 76 (83)
T ss_pred eEEEc--CCCEEEEEEeCCC-chHHHHHHHHHhcCCCeEEEEeecCCCCCCccEEEEEeCCCCCHH--HHHHHHHHHHHH
Confidence 34444 2355566665432 22 3456666655 6777888887765667788999876543332 333444444444
Q ss_pred HH
Q 010897 443 EI 444 (498)
Q Consensus 443 ~l 444 (498)
.+
T Consensus 77 ~~ 78 (83)
T cd06927 77 LC 78 (83)
T ss_pred HH
Confidence 33
No 402
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=47.79 E-value=1.3e+02 Score=29.37 Aligned_cols=86 Identities=7% Similarity=-0.045 Sum_probs=54.8
Q ss_pred cEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcc
Q 010897 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (498)
Q Consensus 155 ~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~ 234 (498)
+.|++.+.-+. .++...++++...+.+.+.++.-..+.+.+.+.+...+++++..-+| +..+|-..+.+.|++.
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGdP-~I~dpg~~Lv~~~~~~--- 112 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTP-LINDPGYHLVRTCREA--- 112 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCCC-ceeCCHHHHHHHHHHC---
Confidence 57788776665 34667777776666665433333344555666555455555534455 7889999999999998
Q ss_pred cCCCceE-EEecCccc
Q 010897 235 TGWDTPI-HVDAASGG 249 (498)
Q Consensus 235 ~~~~~~l-~vD~A~~g 249 (498)
|+.+ ++=|+.+.
T Consensus 113 ---gi~v~vIPGiSA~ 125 (287)
T PRK14994 113 ---GIRVVPLPGPCAA 125 (287)
T ss_pred ---CCCEEEeCCHHHH
Confidence 7754 45555543
No 403
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=45.16 E-value=26 Score=29.51 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=27.9
Q ss_pred ccCHH----HHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 010897 189 VMNPV----KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 189 ~~d~~----~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (498)
.+|.+ .+++.+..++.+|+++.+. .+.+++.++|+++ ++++..=.
T Consensus 64 ~l~~~~r~~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~------~ipll~t~ 112 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKY------NIPLLRTP 112 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHHC------T--EEEES
T ss_pred HCCHHHHHHHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHh------CCcEEEcC
Confidence 35554 4566666788999998886 4689999999999 88876543
No 404
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=43.16 E-value=1.6e+02 Score=23.81 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhh-hCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 010897 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~-~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (498)
.+...++..|.++..+..+ .+.+++.+.+. .++..|.++.. .+.......++.+.+|+. +.++.+++=
T Consensus 19 ~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~----~p~~~iv~G 87 (121)
T PF02310_consen 19 YLAAYLRKAGHEVDILDAN-----VPPEELVEALRAERPDVVGISVS--MTPNLPEAKRLARAIKER----NPNIPIVVG 87 (121)
T ss_dssp HHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHTTCSEEEEEES--SSTHHHHHHHHHHHHHTT----CTTSEEEEE
T ss_pred HHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcCCCcEEEEEcc--CcCcHHHHHHHHHHHHhc----CCCCEEEEE
Confidence 4555667778888887643 44577777665 46777766543 344556677777777665 338899988
Q ss_pred cCccc
Q 010897 245 AASGG 249 (498)
Q Consensus 245 ~A~~g 249 (498)
|.+..
T Consensus 88 G~~~t 92 (121)
T PF02310_consen 88 GPHAT 92 (121)
T ss_dssp ESSSG
T ss_pred CCchh
Confidence 87754
No 405
>PLN02672 methionine S-methyltransferase
Probab=42.40 E-value=5.3e+02 Score=30.32 Aligned_cols=150 Identities=10% Similarity=0.017 Sum_probs=83.7
Q ss_pred HHHHHHhccCCCCC-cCCcchHHHHHHHHHHHHHHcCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010897 74 KLVMASINKNYVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY 152 (498)
Q Consensus 74 ~~l~~~~~~n~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~ 152 (498)
..+...+..+...+ +.-.+...+++-+...|..++|+|...+ .+++..+-..|+-.+++.+.-++.--
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 476 (1082)
T PLN02672 408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD---NVVVFPSRAVAIENALRLFSPRLAIV-------- 476 (1082)
T ss_pred HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc---ceEEeccHHHHHHHHHHhhChHHHhh--------
Confidence 33555666654443 3334888999999999999999997543 36666666777766665543321100
Q ss_pred CCcEEEEcCCchhHHHHHHHHcCCe-----eEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHH
Q 010897 153 DKPNIVTGANVQVCWEKFARYFEVE-----LKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHD 226 (498)
Q Consensus 153 ~~~~Iv~s~~~h~~~~~~~~~~g~~-----~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~ 226 (498)
++- .+..-+.-|..+....|.. -..+.+.+..-+-| .+.++|.. ++..|+........-+..-++.|.+
T Consensus 477 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1082)
T PLN02672 477 --DEH-LTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPRQSD--LVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLN 551 (1082)
T ss_pred --hhh-hhccCCHHHHhHhhhhcccccCccCCeEEEEeCCCcch--HHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHH
Confidence 000 2233444555554444321 01111111111233 45555554 4666655544433333345677888
Q ss_pred HHHHhhcccCCCceEEEec
Q 010897 227 LLTKKNEETGWDTPIHVDA 245 (498)
Q Consensus 227 la~~~~~~~~~~~~l~vD~ 245 (498)
.+++. |++++.|.
T Consensus 552 ~~~~~------~~~~~~~~ 564 (1082)
T PLN02672 552 VTAEI------GARLFLDI 564 (1082)
T ss_pred HHHhh------CcEEEEeh
Confidence 88888 99999996
No 406
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=40.84 E-value=1.8e+02 Score=27.02 Aligned_cols=65 Identities=6% Similarity=-0.026 Sum_probs=40.3
Q ss_pred HHHHHHHcCCeeEEE-EecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 167 WEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 167 ~~~~~~~~g~~~~~v-~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
+.++|+..|.++..+ +...+ -.--.+.++.++..++.+|++... .++ .+..+.+-+++. |++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d-~~~q~~~i~~~i~~~~d~Iiv~~~-~~~----~~~~~l~~~~~~------gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQND-PEEQIEQIEQAISQGVDGIIVSPV-DPD----SLAPFLEKAKAA------GIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTT-HHHHHHHHHHHHHTTESEEEEESS-STT----TTHHHHHHHHHT------TSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCC-HHHHHHHHHHHHHhcCCEEEecCC-CHH----HHHHHHHHHhhc------CceEEE
Confidence 445677889998886 43222 222345677777778877765533 332 344555667778 887765
No 407
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=39.65 E-value=3.4e+02 Score=25.85 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=39.7
Q ss_pred chhHHHHHHHHcCCeeEEEEecCCccccCH---HHHHHHhhhC-CeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCC
Q 010897 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNP---VKAVELVDEN-TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (498)
Q Consensus 163 ~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~---~~L~~~i~~~-t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~ 238 (498)
.|.++..+++.+|+++..+.. ++ ....+ .++.+.|.++ .++|+ ..++.+. +.+..++++. |
T Consensus 176 ~H~af~Y~~~~ygl~~~~~~~-~~-~eps~~~l~~l~~~ik~~~v~~if-~e~~~~~------~~~~~la~~~------g 240 (266)
T cd01018 176 YHPAWGYFARDYGLTQIPIEE-EG-KEPSPADLKRLIDLAKEKGVRVVF-VQPQFST------KSAEAIAREI------G 240 (266)
T ss_pred ECchhHHHHHHcCCEEEecCC-CC-CCCCHHHHHHHHHHHHHcCCCEEE-EcCCCCc------HHHHHHHHHc------C
Confidence 677888999999999776532 22 34544 4555555554 44444 4444443 3444777888 7
Q ss_pred ceEEE
Q 010897 239 TPIHV 243 (498)
Q Consensus 239 ~~l~v 243 (498)
+.++.
T Consensus 241 ~~v~~ 245 (266)
T cd01018 241 AKVVT 245 (266)
T ss_pred CeEEE
Confidence 66543
No 408
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=37.92 E-value=26 Score=37.88 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=36.1
Q ss_pred EEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccc
Q 010897 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (498)
Q Consensus 206 v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~ 251 (498)
+..-+|++..|..++++.+++-|++. ||-|++|-+++.|-
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~------GIgViLD~V~~HF~ 240 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQA------GIGVILDWVPNHFP 240 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHc------CCEEEEEecCCcCC
Confidence 44568899999999999999999999 99999999999874
No 409
>cd07027 RNAP_RPB11_like RPB11 subunit of RNA polymerase. The eukaryotic RPB11 subunit of RNA polymerase (RNAP), as well as its archaeal (L subunit) and bacterial (alpha subunit) counterparts, is involved in the assembly of RNAP subunits. RNAP is a large multi-subunit complex responsible for the synthesis of RNA. It is the principal enzyme of the transcription process, and is a final target in many regulatory pathways that control gene expression in all living cells. At least three distinct RNAP complexes are found in eukaryotic nuclei: RNAP I, RNAP II, and RNAP III, for the synthesis of ribosomal RNA precursor, mRNA precursor, and 5S and tRNA, respectively. A single distinct RNAP complex is found in prokaryotes and archaea, which may be responsible for the synthesis of all RNAs. The assembly of the two largest eukaryotic RNAP subunits that provide most of the enzyme's catalytic functions depends on the presence of RPB3/RPB11 heterodimer subunits. This is also true for the archaeal (D/
Probab=35.66 E-value=2.1e+02 Score=22.12 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=41.4
Q ss_pred EEeeCCCCccEEEEEecCCCCCC-HHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHH
Q 010897 365 EILSKDVGVPLVAFSLKDSSAHT-VFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLK 442 (498)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~ 442 (498)
+++... -+...|.+.+.+ .+ ...|...|.+ .++.+.+|..|-...+.-.+||.+....+.- +.+.++++.+.+
T Consensus 2 kii~~~--~n~~~~~i~~Ed-HTLgNlLr~~L~~~~~V~fAgY~vpHPl~~~~~lrI~T~~~~~P~--~al~~a~~~l~~ 76 (83)
T cd07027 2 RIISKE--KNSVTVEMENED-HTLGNLLREELLKDDQVDFARYYIKHPVIDKIQIRIQTKSGIKPK--DALKRAVNKLSK 76 (83)
T ss_pred eeEecC--CCEEEEEEeCCC-chHHHHHHHHHhcCCCeeEEEEecCCCCCCccEEEEEECCCCCHH--HHHHHHHHHHHH
Confidence 445442 355566665432 22 3455566554 5666778887654566778999876544432 333444444444
Q ss_pred HH
Q 010897 443 EI 444 (498)
Q Consensus 443 ~l 444 (498)
.+
T Consensus 77 ~~ 78 (83)
T cd07027 77 LY 78 (83)
T ss_pred HH
Confidence 43
No 410
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=35.23 E-value=86 Score=29.87 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=18.5
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecC
Q 010897 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (498)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~A 246 (498)
...++.|.+++++. ++++++||-
T Consensus 118 ~k~i~~iley~~~~------dvP~VIDaD 140 (306)
T KOG3974|consen 118 LKEIAKILEYLRGK------DVPLVIDAD 140 (306)
T ss_pred HHHHHHHHHHHhcC------CCcEEEcCC
Confidence 34567788888888 999999984
No 411
>PRK01146 DNA-directed RNA polymerase subunit L; Provisional
Probab=34.72 E-value=2.2e+02 Score=22.10 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=42.8
Q ss_pred eEEeeCCCCccEEEEEecCCCCCC-HHHHHHHHHh-cCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 364 FEILSKDVGVPLVAFSLKDSSAHT-VFEISEGLRK-FGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~~-~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
++++... -+...|.+.+.+ .+ ...|...|.+ .++.+.+|..|-...+.-.+||-+....+.. +.+.++++.+.
T Consensus 3 ikvi~~~--~n~~~~~i~~ED-HTlgNlLr~~L~~~~~V~fAgY~vpHPl~~~~~lrIqt~~~~~p~--~al~~a~~~L~ 77 (85)
T PRK01146 3 IKVLEKE--DNELELEIEGED-HTLMNLLKEELLEDPGVEAASYDIDHPLISNPVLKIKTDGGIDPL--EALKEAAKRII 77 (85)
T ss_pred EEEEecC--CCEEEEEEeCCC-chHHHHHHHHHhcCCCeeEEEeecCCCCCCccEEEEEECCCCCHH--HHHHHHHHHHH
Confidence 5566553 455566665432 22 2455555544 5777788887755567778999876544433 33344444444
Q ss_pred HHH
Q 010897 442 KEI 444 (498)
Q Consensus 442 ~~l 444 (498)
+.+
T Consensus 78 ~~~ 80 (85)
T PRK01146 78 DLC 80 (85)
T ss_pred HHH
Confidence 433
No 412
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=34.57 E-value=4.1e+02 Score=25.29 Aligned_cols=74 Identities=8% Similarity=0.142 Sum_probs=42.2
Q ss_pred EEEEcCCchhHHHHHHHHcCCeeEEEE----ecCCccccCHHHHH---HHhhhCCeEEEEeeccCCcccccCHHHHHHHH
Q 010897 156 NIVTGANVQVCWEKFARYFEVELKEVK----LEEGYYVMNPVKAV---ELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (498)
Q Consensus 156 ~Iv~s~~~h~~~~~~~~~~g~~~~~v~----~~~~~~~~d~~~L~---~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la 228 (498)
.+++ .|.++..+++.+|++...+. ....+....+.+|. +.+.++..-++++.+..+. ..++.|..++
T Consensus 155 ~~v~---~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~---k~~~~l~~la 228 (264)
T cd01020 155 PVAA---TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALIVNPQQAS---SATTNITGLA 228 (264)
T ss_pred eEEE---eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEEeCCCCCc---HHHHHHHHHH
Confidence 4555 68999999999999966421 11112345565544 4444543333344444332 2345566788
Q ss_pred HHhhcccCCCceE
Q 010897 229 TKKNEETGWDTPI 241 (498)
Q Consensus 229 ~~~~~~~~~~~~l 241 (498)
++. ++.+
T Consensus 229 ~~~------~~~v 235 (264)
T cd01020 229 KRS------GVPV 235 (264)
T ss_pred HHc------CCCE
Confidence 888 6665
No 413
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=34.00 E-value=1.4e+02 Score=22.69 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=40.6
Q ss_pred EEcCCchhHHHHHHHHcCCe--eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcc
Q 010897 158 VTGANVQVCWEKFARYFEVE--LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~~--~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG 216 (498)
|+...-.--..|+|..+.+. ...+-+.+|+-.++ |+.=..+.+||.++++..|..-+|
T Consensus 18 V~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGTeVt-EeyF~tLp~nT~lmvL~~gq~W~g 77 (77)
T cd06535 18 VAAKNLKELLRKGCRLLQLPCAGSRLCLYEDGTEVT-EEYFPTLPDNTELVLLTPGQSWQG 77 (77)
T ss_pred EEcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEeh-HHHHhcCCCCcEEEEEcCCCccCC
Confidence 34444455667888888876 44566666655666 777788889999999887766554
No 414
>KOG4392 consensus RNA polymerase, subunit L [Transcription]
Probab=33.82 E-value=1.1e+02 Score=25.00 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=52.1
Q ss_pred CccEEEEEecCCCCCCHHHHHHHH-HhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHHHHHHcCccc
Q 010897 372 GVPLVAFSLKDSSAHTVFEISEGL-RKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSR 450 (498)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L-~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l~~l~~~~~~ 450 (498)
..|-..|++...+.-=..-+..+| .+..+.+.+|..|-.....-.+||....+.+.. +.+.+++.+++.++..+..+
T Consensus 27 vpNA~~fTiekEDHTLGNii~~qLl~D~~vLFagYkvpHPl~~~~~LRiqtt~d~~p~--~al~~a~~~l~~el~~l~~~ 104 (117)
T KOG4392|consen 27 VPNAALFTIEKEDHTLGNIIKSQLLKDPRVLFAGYKVPHPLEHKIILRVQTTEDCSPA--DALTNAITDLIEELSLLENR 104 (117)
T ss_pred CCceEEEEEecccchHHHHHHHHHccCccceEeeecCCCcccccEEEEEecCCCCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 345667777543211123444444 445677777877655677889999988776654 56788888888888777665
Q ss_pred ccc
Q 010897 451 VST 453 (498)
Q Consensus 451 ~~~ 453 (498)
+..
T Consensus 105 f~~ 107 (117)
T KOG4392|consen 105 FKA 107 (117)
T ss_pred HHH
Confidence 543
No 415
>COG3147 DedD Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.61 E-value=1.2e+02 Score=27.85 Aligned_cols=52 Identities=29% Similarity=0.397 Sum_probs=33.9
Q ss_pred CHHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHH
Q 010897 387 TVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEV 440 (498)
Q Consensus 387 ~~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~ 440 (498)
+..+|+.+|+..|+-. |..+.......+-|+-++.+.+++..+.+...+++.
T Consensus 164 ranel~~~Lr~~G~~a--yi~~~~p~qg~ltRv~vGP~~sr~~a~~~~~el~ql 215 (226)
T COG3147 164 RANELVAKLRGAGYRA--YIEPSTPVQGDLTRVRVGPDASRAKAEGLLGELEQL 215 (226)
T ss_pred HHHHHHHHHHhCCCce--eecccCCCCCceeEEEecCcccHHHHHHHHHHHHHH
Confidence 4567888888887643 443333334455688888888988777666555443
No 416
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=33.57 E-value=89 Score=31.80 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=47.3
Q ss_pred EEcCCchhHHHHHHHHcCC--eeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHHHHHHHHHhh
Q 010897 158 VTGANVQVCWEKFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~--~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~ 232 (498)
++....|....|. |.+.- ++.+++-.+.....+.+.|.+.+.. +..+|+ ...+.-|.+.+++.+.++||+.
T Consensus 95 l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vV--LSDY~KG~L~~~q~~I~~ar~~- 170 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALV--LSDYAKGVLTNVQKMIDLAREA- 170 (467)
T ss_pred eEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEE--EeccccccchhHHHHHHHHHHc-
Confidence 3444555544443 33322 2444444333222344455555543 234443 4456679999999999999999
Q ss_pred cccCCCceEEEec
Q 010897 233 EETGWDTPIHVDA 245 (498)
Q Consensus 233 ~~~~~~~~l~vD~ 245 (498)
++++.+|-
T Consensus 171 -----~~pVLvDP 178 (467)
T COG2870 171 -----GIPVLVDP 178 (467)
T ss_pred -----CCcEEECC
Confidence 99999995
No 417
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=33.34 E-value=1.6e+02 Score=22.57 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=41.6
Q ss_pred EEcCCchhHHHHHHHHcCC--eeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 158 VTGANVQVCWEKFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~--~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
|+...-.--..|++..+++ ....+-+.+|+-.+|-++.=..+.+||.+|++..+..
T Consensus 18 V~A~sL~eL~~K~~~~l~l~~~~~~lvL~eDGTeVddEeYF~tLp~nT~l~~l~~gq~ 75 (78)
T cd01615 18 VAASSLEELLSKACEKLKLPSAPVTLVLEEDGTEVDDEEYFQTLPDNTVLMLLEPGQK 75 (78)
T ss_pred EEcCCHHHHHHHHHHHcCCCCCCeEEEEeCCCcEEccHHHHhcCCCCcEEEEECCCCC
Confidence 3444455567788999988 5666667666567888888888999999888776654
No 418
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=33.12 E-value=2.7e+02 Score=27.49 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=40.0
Q ss_pred cccCHHHHHHHhhh-----CCeEEEEeeccCCccccc-CHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 188 YVMNPVKAVELVDE-----NTICVAAILGSTLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 188 ~~~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
..++.+++++.++. ...-+++.+|+-|.|.-. ...+|.++|++. +..+++|..-.
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~------g~~vilD~Sg~ 169 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQ------GAKVILDTSGE 169 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCeEEEECChH
Confidence 45777666665542 122346678999988874 579999999999 99999998644
No 419
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=32.11 E-value=10 Score=33.89 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=33.8
Q ss_pred HHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccc
Q 010897 194 KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (498)
Q Consensus 194 ~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g 249 (498)
.|+.+++.+...|++. +|.+..++.+.+.++++++ .+++|+|-..|-
T Consensus 11 ~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK----~vfVHiDli~Gl 57 (175)
T PF04309_consen 11 DLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGK----KVFVHIDLIEGL 57 (175)
T ss_dssp CCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-----EEEEECCGEETB
T ss_pred HHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCC----EEEEEehhcCCC
Confidence 3455565555556554 3777899999999999955 789999987764
No 420
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=31.03 E-value=4.8e+02 Score=25.64 Aligned_cols=115 Identities=13% Similarity=-0.009 Sum_probs=65.8
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCc--hh--HHHHHHHHcCCeeEEEEecCCcc--ccCH
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV--QV--CWEKFARYFEVELKEVKLEEGYY--VMNP 192 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~--h~--~~~~~~~~~g~~~~~v~~~~~~~--~~d~ 192 (498)
...+|.|+.++|.+...++..+. -|. +.+.++-... +. -..-..+.+|++++.++...+ . ....
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~------lGl---~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d-~~~~~~~ 134 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAK------LGL---KCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTD-IGINASA 134 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHh------cCC---cEEEEEeccccccccccchhhhhhcCceEEEecCCCC-hhhchhh
Confidence 38899999999987655544331 232 2344443333 11 112234778999999887543 4 3334
Q ss_pred HHHHHHhhhC--CeEEEEeeccCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 193 VKAVELVDEN--TICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 193 ~~L~~~i~~~--t~~v~~~~~~t~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
+.+.+-+..+ ...|+...+.++.|.. .-..||.+-++++ . .+=.+|.+..+
T Consensus 135 ~~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~-~----~fD~vVva~gs 190 (323)
T COG2515 135 EELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQL-L----KFDSVVVAPGS 190 (323)
T ss_pred HHHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhc-c----CCCEEEEeCCC
Confidence 5666666543 4556667778886665 4555666666652 0 44445555443
No 421
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=30.33 E-value=2.3e+02 Score=29.96 Aligned_cols=71 Identities=11% Similarity=-0.055 Sum_probs=48.4
Q ss_pred HHHcC-CeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 171 ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 171 ~~~~g-~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
++..| .++..++...+ .++.+++.+.|.+ ++.+|.++. .|..+....++++.+|+. .+++.+++=|.+.
T Consensus 32 L~~~G~~~V~iiD~~~~--~~~~~~~~~~l~~~~pdvVgis~---~t~~~~~a~~~~~~~k~~----~P~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMTG--PLTDEKLVERLRAHCPDLVLITA---ITPAIYIACETLKFARER----LPNAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEeccccc--CCCHHHHHHHHHhcCcCEEEEec---CcccHHHHHHHHHHHHHH----CCCCEEEEcCCCc
Confidence 45567 57777776532 4778888887765 577776653 244566677888888875 2289999888776
Q ss_pred cc
Q 010897 249 GF 250 (498)
Q Consensus 249 g~ 250 (498)
.+
T Consensus 103 t~ 104 (497)
T TIGR02026 103 TF 104 (497)
T ss_pred Cc
Confidence 54
No 422
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=30.33 E-value=2.5e+02 Score=23.58 Aligned_cols=60 Identities=10% Similarity=-0.037 Sum_probs=37.5
Q ss_pred CCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHHHH
Q 010897 161 ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 161 ~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
+.....+...++..|.++....+-.| |++.+++.+.. +.. ++++.|.+..|..|-..+..
T Consensus 18 d~n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~i~~~~~~~D-lvittGG~g~g~~D~t~~ai 80 (133)
T cd00758 18 DTNGPALEALLEDLGCEVIYAGVVPD----DADSIRAALIEASREAD-LVLTTGGTGVGRRDVTPEAL 80 (133)
T ss_pred EchHHHHHHHHHHCCCEEEEeeecCC----CHHHHHHHHHHHHhcCC-EEEECCCCCCCCCcchHHHH
Confidence 33455666677888999888766544 45555555432 234 55556767778887776543
No 423
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=30.33 E-value=1.3e+02 Score=30.47 Aligned_cols=82 Identities=20% Similarity=0.059 Sum_probs=48.2
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHh
Q 010897 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (498)
Q Consensus 120 ~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i 199 (498)
.+-.++|..+.-+|..+... |. +..|++|+..-..-....+.+|++++.++...+ ..-..+..++..
T Consensus 114 vV~aSsGN~G~alA~~a~~~---------G~---~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~-~~~~~~~a~~l~ 180 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAMK---------GY---KMILTMPSYTSLERRVTMRAFGAELVLTDPTKG-MGGTVKKAYELL 180 (368)
T ss_pred EEEeCCchHHHHHHHHHHHc---------CC---CEEEEECCCCCHHHHHHHHHcCCEEEEECCCCC-ccHHHHHHHHHH
Confidence 44455777776666655422 32 247888887666777788999999998874322 112234455555
Q ss_pred hhCCeEEEEeeccCC
Q 010897 200 DENTICVAAILGSTL 214 (498)
Q Consensus 200 ~~~t~~v~~~~~~t~ 214 (498)
.+++-.+++...+|+
T Consensus 181 ~~~~~~~~~~q~~np 195 (368)
T PLN02556 181 ESTPDAFMLQQFSNP 195 (368)
T ss_pred HhcCCCCccCCCCCH
Confidence 554444444444444
No 424
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=30.16 E-value=2.2e+02 Score=24.59 Aligned_cols=57 Identities=9% Similarity=-0.084 Sum_probs=37.0
Q ss_pred hhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-----CCeEEEEeeccCCcccccCHHHHH
Q 010897 164 QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 164 h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-----~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
.+.+...++..|+++....+-.| |++.+++.+.+ +.. ++++.|.+..|..|-..+..
T Consensus 22 ~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~~~D-lVittGG~s~g~~D~t~~al 83 (152)
T cd00886 22 GPALVELLEEAGHEVVAYEIVPD----DKDEIREALIEWADEDGVD-LILTTGGTGLAPRDVTPEAT 83 (152)
T ss_pred HHHHHHHHHHcCCeeeeEEEcCC----CHHHHHHHHHHHHhcCCCC-EEEECCCcCCCCCcCcHHHH
Confidence 33566677889999888877554 45656555542 344 44555778889988766543
No 425
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=29.81 E-value=5.6e+02 Score=25.59 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=56.5
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchh------HHHHHHHHcCCeeEEEEecCCccccCH
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNP 192 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~------~~~~~~~~~g~~~~~v~~~~~~~~~d~ 192 (498)
+++..+||-.+..++..+... + |. ++.++.-++.+. ...+.++.+|++...+.++.
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~-~-------gl---~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d~------- 123 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKK-L-------GL---NPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITINP------- 123 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHH-h-------CC---ceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCCH-------
Confidence 477788888887665443222 1 21 233233333322 45667777898887777543
Q ss_pred HHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccc
Q 010897 193 VKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (498)
Q Consensus 193 ~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g 249 (498)
+.+.+.+..... -...+..+ ........+.++|+++ |+.+++.|..+.
T Consensus 124 ~~~~~l~~~~~~--~~~~pc~~-c~~~~~~~l~~~A~~~------gi~~Il~G~~~d 171 (343)
T TIGR03573 124 ETFRKLQRAYFK--KVGDPEWP-QDHAIFASVYQVALKF------NIPLIIWGENIA 171 (343)
T ss_pred HHHHHHHHHHHh--ccCCCchh-hhhHHHHHHHHHHHHh------CCCEEEeCCCHH
Confidence 333222221100 00112121 1123456788999999 999999987654
No 426
>PLN03013 cysteine synthase
Probab=29.81 E-value=1.7e+02 Score=30.43 Aligned_cols=75 Identities=20% Similarity=0.142 Sum_probs=46.2
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHh
Q 010897 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (498)
Q Consensus 120 ~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i 199 (498)
++-.++|..++-+|..+... |. +-.|++|+..-..-...++.+|++++.++-+.+ +.-..+..+++.
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---------G~---~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~-~~~a~~~A~ela 244 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---------GY---RLILTMPASMSMERRVLLKAFGAELVLTDPAKG-MTGAVQKAEEIL 244 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---------CC---CEEEEECCCCcHHHHHHHHHcCCEEEEECCCCC-hHHHHHHHHHHH
Confidence 45556777777666655432 32 247888988888888889999999998864321 111134445554
Q ss_pred hhCCeEEE
Q 010897 200 DENTICVA 207 (498)
Q Consensus 200 ~~~t~~v~ 207 (498)
.+++-.++
T Consensus 245 ~~~~g~~~ 252 (429)
T PLN03013 245 KNTPDAYM 252 (429)
T ss_pred hhcCCeEe
Confidence 44333333
No 427
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=29.80 E-value=1.3e+02 Score=28.70 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=23.3
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
|..-..+++.++.+++ ++-++||+.|=
T Consensus 50 ~G~l~~e~l~~~l~e~------~i~llIDATHP 76 (257)
T COG2099 50 GGFLGAEGLAAFLREE------GIDLLIDATHP 76 (257)
T ss_pred cCcCCHHHHHHHHHHc------CCCEEEECCCh
Confidence 4556789999999999 99999999873
No 428
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=29.06 E-value=3.3e+02 Score=24.04 Aligned_cols=73 Identities=10% Similarity=-0.082 Sum_probs=46.4
Q ss_pred EEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHH----HHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHh
Q 010897 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPV----KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 156 ~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~----~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~ 231 (498)
+++....+...+..++...|++++... +..|++ .++-+.+++.-.+++..+.. |...++.-+++.
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~k-----G~~Dv~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~ 128 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVA-----GDVDVRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKEN 128 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEec-----CcccHHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHC
Confidence 455555556677778888898866543 235554 44333345555666665543 577888888899
Q ss_pred hcccCCCceEEEec
Q 010897 232 NEETGWDTPIHVDA 245 (498)
Q Consensus 232 ~~~~~~~~~l~vD~ 245 (498)
|..+++=+
T Consensus 129 ------G~~V~v~g 136 (160)
T TIGR00288 129 ------GKETIVIG 136 (160)
T ss_pred ------CCEEEEEe
Confidence 88877644
No 429
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=29.02 E-value=2.3e+02 Score=29.63 Aligned_cols=77 Identities=19% Similarity=0.090 Sum_probs=49.0
Q ss_pred cCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCc
Q 010897 160 GANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (498)
Q Consensus 160 s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~ 239 (498)
++.+=-+-.++|.-.|+.+..+-. +.++..++++...-+|.+|+++.| +.-|.-+-+-..+++..+. ++++
T Consensus 82 ~~~TaeAAk~AAlgAGA~V~~~~a----~~l~~~~l~~I~~~~PDIILLaGG-tDGG~~e~~l~NA~~La~~----~~~~ 152 (463)
T TIGR01319 82 PEITAEAAKRAAHGAGAKIANVYA----YDLNNKDIEAIEESNLDIILFAGG-TDGGEEECGIHNAKMLAEH----GLDC 152 (463)
T ss_pred chhhHHHHHHHHhcCCcEEEEEEe----ecCCHHHHHHHhhcCCCEEEEeCC-cCCCchHHHHHHHHHHHhc----CCCC
Confidence 333333445555556777777664 345666777766667777766655 4458888777777766665 3477
Q ss_pred eEEEec
Q 010897 240 PIHVDA 245 (498)
Q Consensus 240 ~l~vD~ 245 (498)
+|++=|
T Consensus 153 pIIyAG 158 (463)
T TIGR01319 153 AIIVAG 158 (463)
T ss_pred cEEEeC
Confidence 877554
No 430
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=27.73 E-value=2.2e+02 Score=19.93 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCCeEEeeCCCCccEEEEEecCCCCCCHHHHHHHHHhcCc
Q 010897 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGW 400 (498)
Q Consensus 348 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~G~ 400 (498)
..-++.+.+.|.+++|+.-+.-....+.+.+.+.++ ..+..++.+.+.+-|.
T Consensus 10 ~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~-~~~~~~i~~~i~~~Gy 61 (62)
T PF00403_consen 10 EGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD-KTSIEKIIEAIEKAGY 61 (62)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT-TSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC-CCCHHHHHHHHHHhCc
Confidence 345677888999999876332211346677777443 3677899999998874
No 431
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=26.65 E-value=5.6e+02 Score=26.90 Aligned_cols=105 Identities=17% Similarity=0.058 Sum_probs=59.3
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-EEEEcCCchhH---HHHHHHHcCCeeEEEEecCCccccCHHH
Q 010897 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVC---WEKFARYFEVELKEVKLEEGYYVMNPVK 194 (498)
Q Consensus 119 ~~~~t~g~sea~~la~~a~~~~~~~~~~~~g~~~~~~-~Iv~s~~~h~~---~~~~~~~~g~~~~~v~~~~~~~~~d~~~ 194 (498)
..+.|.|.+..+...++-+.+. |+ +- .||+.+.-..- +.+-..-.|+.+.++-++.-+|.|
T Consensus 361 dviltyg~s~vV~~ill~A~~~--------~k---~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syim---- 425 (556)
T KOG1467|consen 361 DVLLTYGSSSVVNMILLEAKEL--------GK---KFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYIM---- 425 (556)
T ss_pred CEEEEecchHHHHHHHHHHHHh--------Cc---ceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHHH----
Confidence 3777877777766666555442 11 12 44454433332 222233358888887765422322
Q ss_pred HHHHhhhCCeEEEEeeccCCccccc---CHHHHHHHHHHhhcccCCCceEEEecCccc
Q 010897 195 AVELVDENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (498)
Q Consensus 195 L~~~i~~~t~~v~~~~~~t~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~A~~g 249 (498)
.+-++.+.-++.-..+|.+. --..|+-.++++ +++|+|=+=.--
T Consensus 426 -----~evtkvfLGahailsNG~vysR~GTa~valvAna~------nVPVlVCCE~yK 472 (556)
T KOG1467|consen 426 -----LEVTKVFLGAHAILSNGAVYSRVGTACVALVANAF------NVPVLVCCEAYK 472 (556)
T ss_pred -----HhcceeeechhhhhcCcchhhhcchHHHHHHhccc------CCCEEEEechhh
Confidence 22356665566666677764 345677778888 898887664333
No 432
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=26.40 E-value=1.5e+02 Score=24.28 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=38.1
Q ss_pred cccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 010897 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (498)
Q Consensus 188 ~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (498)
..+++++|++.+.++|-.|+ .|+-.+|.+.=.++..+++++. ++-+++
T Consensus 47 Hkl~~eEle~~lee~~E~iv--vGTG~~G~l~l~~ea~e~~r~k------~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEGPEVIV--VGTGQSGMLELSEEAREFFRKK------GCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcCCcEEE--EecCceeEEEeCHHHHHHHHhc------CCeEEE
Confidence 57999999999999886554 4666778888888889999988 765544
No 433
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=26.13 E-value=3.7e+02 Score=22.03 Aligned_cols=76 Identities=16% Similarity=0.089 Sum_probs=46.1
Q ss_pred EEEEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeecc--CCcccccCHHHHHHHHHHhhc
Q 010897 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS--TLTGEFEDVKLLHDLLTKKNE 233 (498)
Q Consensus 156 ~Iv~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~--t~tG~~~~l~~I~~la~~~~~ 233 (498)
+++.+..+.-.+.+ ..|+.+..|+.....+. ..+.++|.....-++++.++ ...+...|-..|...|-++
T Consensus 29 ~i~AT~gTa~~L~~---~~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~-- 100 (115)
T cd01422 29 RLVATGTTGLLIQE---ATGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVY-- 100 (115)
T ss_pred EEEEechHHHHHHH---hhCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHc--
Confidence 56665544443333 15888888854211132 44666676666555555554 3333356788999999999
Q ss_pred ccCCCceEEE
Q 010897 234 ETGWDTPIHV 243 (498)
Q Consensus 234 ~~~~~~~l~v 243 (498)
++++..
T Consensus 101 ----~Ip~~T 106 (115)
T cd01422 101 ----NIPLAT 106 (115)
T ss_pred ----CCCEEE
Confidence 887754
No 434
>PRK00685 metal-dependent hydrolase; Provisional
Probab=25.98 E-value=5.1e+02 Score=23.63 Aligned_cols=75 Identities=13% Similarity=0.117 Sum_probs=46.6
Q ss_pred EEE-EcCCchh-HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh-CCeEEEEeeccCCcccccCHHHHHHHHHHh
Q 010897 156 NIV-TGANVQV-CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 156 ~Iv-~s~~~h~-~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~-~t~~v~~~~~~t~tG~~~~l~~I~~la~~~ 231 (498)
.|+ ..+..+. ......+..++++..+|+.. .+.|++++..+++.. +++.++.++-.+......+.+++.+.+++.
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~-~~h~~~~ea~~~~~~~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKPDVALLPIGD-NFTMGPEDAALAVELIKPKIVIPMHYNTFPLIEQDPEKFKALVEGL 213 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCCCEEEEecCC-ccccCHHHHHHHHHhhCCCEEEEeccCCCcCCcCCHHHHHHHHHhc
Confidence 344 3444443 23444445677877777653 367999877666654 677788888655444445677877777764
No 435
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=25.24 E-value=3.6e+02 Score=22.99 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=35.9
Q ss_pred chhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHHHH
Q 010897 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 163 ~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
.-..+...++..|+++....+-.| |.+.|.+.+.+ +..+| ++.|.+..|..|-..+..
T Consensus 28 n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~Dli-IttGG~g~g~~D~t~~ai 88 (144)
T TIGR00177 28 NGPLLAALLEEAGFNVSRLGIVPD----DPEEIREILRKAVDEADVV-LTTGGTGVGPRDVTPEAL 88 (144)
T ss_pred cHHHHHHHHHHCCCeEEEEeecCC----CHHHHHHHHHHHHhCCCEE-EECCCCCCCCCccHHHHH
Confidence 344566667888999888876554 35555555542 33444 455667778877665543
No 436
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=24.96 E-value=3.6e+02 Score=22.55 Aligned_cols=60 Identities=10% Similarity=0.001 Sum_probs=36.9
Q ss_pred CCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhh---CCeEEEEeeccCCcccccCHHHHH
Q 010897 161 ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (498)
Q Consensus 161 ~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~---~t~~v~~~~~~t~tG~~~~l~~I~ 225 (498)
+..-..+...++..|+++....+-.| |.+.+++.+.. +..+ +++.|.+..|..|-..+..
T Consensus 17 d~~~~~l~~~l~~~G~~~~~~~~v~D----d~~~I~~~l~~~~~~~dl-iittGG~g~g~~D~t~~~l 79 (135)
T smart00852 17 DSNGPALAELLTELGIEVTRYVIVPD----DKEAIKEALREALERADL-VITTGGTGPGPDDVTPEAV 79 (135)
T ss_pred cCcHHHHHHHHHHCCCeEEEEEEeCC----CHHHHHHHHHHHHhCCCE-EEEcCCCCCCCCcCcHHHH
Confidence 33445667778889998877666443 45555555542 3444 4455666678887766643
No 437
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=24.44 E-value=1.5e+02 Score=22.52 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcCcEeeeecCCCCCCCeeEEEEeecCCCCHHHHHHHHHHHHHHH
Q 010897 388 VFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 441 (498)
Q Consensus 388 ~~~l~~~L~~~G~~v~~~~~~~~~~~~~~lRv~v~~~~t~~~~~~l~~~l~~~l 441 (498)
-..+++.|.++|+.+.++-........+ .|..+ +..+.+++|+..++
T Consensus 32 y~~~a~~L~~~G~~V~~~D~rGhG~S~g-~rg~~------~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 32 YAHLAEFLAEQGYAVFAYDHRGHGRSEG-KRGHI------DSFDDYVDDLHQFI 78 (79)
T ss_pred HHHHHHHHHhCCCEEEEECCCcCCCCCC-ccccc------CCHHHHHHHHHHHh
Confidence 4689999999999987665443322221 33322 35566788888765
No 438
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=23.48 E-value=85 Score=33.99 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=29.5
Q ss_pred ccCCcccccCHHHHHHHHHHhhcccCCCceEEEecCccccc
Q 010897 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (498)
Q Consensus 211 ~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~g~~ 251 (498)
|.|+ |-+..+++-.+++++| |.+++.-+||||+-
T Consensus 164 PGTp-gPitt~~EA~eF~k~y------G~PvI~KAAyGGGG 197 (1176)
T KOG0369|consen 164 PGTP-GPITTVEEALEFVKEY------GLPVIIKAAYGGGG 197 (1176)
T ss_pred CCCC-CCcccHHHHHHHHHhc------CCcEEEeecccCCC
Confidence 4454 7888899999999999 99999999998864
No 439
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=23.45 E-value=2.6e+02 Score=21.09 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=40.1
Q ss_pred EEcCCchhHHHHHHHHcCCe--eEEEEecCCccccCHHHHHHHhhhCCeEEEEeecc
Q 010897 158 VTGANVQVCWEKFARYFEVE--LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~~--~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~ 212 (498)
|+...-.--..|++..+++. ...+-+.+|+-.+|-++.=..+.+||.++++..|.
T Consensus 16 V~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGT~VddEeyF~tLp~nt~l~~L~~gq 72 (74)
T smart00266 16 VAASSLEELLSKVCDKLALPDSPVTLVLEEDGTIVDDEEYFQTLPDNTELMALEKGE 72 (74)
T ss_pred EEcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEEccHHHHhcCCCCcEEEEEcCCC
Confidence 34444455667888888886 56666666656788888888899999988876653
No 440
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=22.81 E-value=3.1e+02 Score=24.09 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=38.2
Q ss_pred CchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHh----hhCCeEEEEeeccCCcccccCHHH-HHHHH
Q 010897 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV----DENTICVAAILGSTLTGEFEDVKL-LHDLL 228 (498)
Q Consensus 162 ~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i----~~~t~~v~~~~~~t~tG~~~~l~~-I~~la 228 (498)
.....+...++..|+++..+.+-.| |.+.+.+++ +.+..-++++.|.+..|..|-..+ +.++.
T Consensus 22 ~n~~~l~~~L~~~G~~v~~~~iv~D----d~~~i~~~l~~~~~~~~~DlVIttGGtg~g~~D~t~eal~~l~ 89 (163)
T TIGR02667 22 TSGQYLVERLTEAGHRLADRAIVKD----DIYQIRAQVSAWIADPDVQVILITGGTGFTGRDVTPEALEPLF 89 (163)
T ss_pred CcHHHHHHHHHHCCCeEEEEEEcCC----CHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCcHHHHHHHH
Confidence 3444666667888999888776554 344444444 322223555567788899987655 44444
No 441
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=22.71 E-value=5.6e+02 Score=24.37 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=47.9
Q ss_pred CcEE--EEcCCchhHHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHh
Q 010897 154 KPNI--VTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 154 ~~~I--v~s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~ 231 (498)
+|-| |++.-+-.....+.-..|+.+.-... ++++++... ...+++++.|+-..-.++-+....+.+.++
T Consensus 8 ~PLVh~ITN~Vt~n~~AN~~LA~GasPiMa~~--------~~E~~e~~~-~a~al~iNiGTl~~~~~~~m~~A~~~A~~~ 78 (246)
T PF02110_consen 8 RPLVHCITNYVTANDVANALLAIGASPIMAEA--------PEEVEEFAS-IADALVINIGTLTDERIEAMKKAAKAANEL 78 (246)
T ss_dssp --EEEEE--TTTHHHHHHHHHHCTSEEEE--S--------TTTHHHHHH-CTSEEEEESTTSSHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEccccchhhhHHHHHHHcCCCccccCC--------HHHHHHHHH-HcCEEEEECCCCCHhHHHHHHHHHHHHHHc
Confidence 3545 34444444666667777887655442 233444332 355688888866655667778888888899
Q ss_pred hcccCCCceEEEecCcccc
Q 010897 232 NEETGWDTPIHVDAASGGF 250 (498)
Q Consensus 232 ~~~~~~~~~l~vD~A~~g~ 250 (498)
++|++.|-+-.|.
T Consensus 79 ------~~PvVLDPVgvGa 91 (246)
T PF02110_consen 79 ------GIPVVLDPVGVGA 91 (246)
T ss_dssp ------T--EEEE-TTBTT
T ss_pred ------CCCEEEeCcccCC
Confidence 9999999876553
No 442
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=22.47 E-value=4.7e+02 Score=23.47 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=24.5
Q ss_pred HHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 168 ~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
..+++.+|.+++-+-...+ ..++++-.+-+-+-+..++++..+.|
T Consensus 26 ~~~aR~l~~~~iNLGfsG~-~~le~~~a~~ia~~~a~~~~ld~~~N 70 (178)
T PF14606_consen 26 AILARRLGLDVINLGFSGN-GKLEPEVADLIAEIDADLIVLDCGPN 70 (178)
T ss_dssp HHHHHHHT-EEEEEE-TCC-CS--HHHHHHHHHS--SEEEEEESHH
T ss_pred HHHHHHcCCCeEeeeecCc-cccCHHHHHHHhcCCCCEEEEEeecC
Confidence 3467889999988888754 67888644333222345666655555
No 443
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=22.44 E-value=5e+02 Score=22.26 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=47.9
Q ss_pred EEEEcCCchhHHHHHHHHc-CCeeEEEEecC-CccccCHHHHHHHhhhCCeEEEEeec--cCCcccccCHHHHHHHHHHh
Q 010897 156 NIVTGANVQVCWEKFARYF-EVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG--STLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 156 ~Iv~s~~~h~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~v~~~~~--~t~tG~~~~l~~I~~la~~~ 231 (498)
.|+....+ .+..+.. |+.+..| +.+ .++ + ..+.+.|.....-++++.+ +...+...+...|...|-++
T Consensus 34 ~l~AT~gT----a~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~ 105 (142)
T PRK05234 34 ELYATGTT----GGLIQEATGLDVTRL-LSGPLGG--D-QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVW 105 (142)
T ss_pred EEEEeChH----HHHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHc
Confidence 46555432 2233344 8888777 432 112 2 4566777665555555555 44444356788999999999
Q ss_pred hcccCCCceEEEecCcc
Q 010897 232 NEETGWDTPIHVDAASG 248 (498)
Q Consensus 232 ~~~~~~~~~l~vD~A~~ 248 (498)
++++...-+-+
T Consensus 106 ------~IP~~T~l~tA 116 (142)
T PRK05234 106 ------NIPVATNRATA 116 (142)
T ss_pred ------CCCEEcCHHHH
Confidence 99988765443
No 444
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=21.42 E-value=3.8e+02 Score=24.95 Aligned_cols=68 Identities=9% Similarity=-0.009 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCeeEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHhhcccCCCceE-EEe
Q 010897 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI-HVD 244 (498)
Q Consensus 166 ~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~~~~~~~~~~l-~vD 244 (498)
.+.++++..|..+..+....+ ...-.+.++.++..+..+|++..++.. ...++.+.+++. ++++ .+|
T Consensus 20 gi~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~vdgii~~~~~~~-----~~~~~i~~~~~~------~ipvV~~~ 87 (273)
T cd06305 20 GTKAEAEALGGDLRVYDAGGD-DAKQADQIDQAIAQKVDAIIIQHGRAE-----VLKPWVKRALDA------GIPVVAFD 87 (273)
T ss_pred HHHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEecCChh-----hhHHHHHHHHHc------CCCEEEec
Confidence 344567778888776543221 111123455566667777777554321 123333445666 6654 455
Q ss_pred c
Q 010897 245 A 245 (498)
Q Consensus 245 ~ 245 (498)
.
T Consensus 88 ~ 88 (273)
T cd06305 88 V 88 (273)
T ss_pred C
Confidence 4
No 445
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=21.29 E-value=2.4e+02 Score=26.81 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=24.6
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecCcc
Q 010897 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (498)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~A~~ 248 (498)
.|.+.+.+++.++++++ ++-+++|+.|-
T Consensus 48 ~G~l~~~~~l~~~l~~~------~i~~VIDATHP 75 (248)
T PRK08057 48 VGGFGGAEGLAAYLREE------GIDLVIDATHP 75 (248)
T ss_pred ECCCCCHHHHHHHHHHC------CCCEEEECCCc
Confidence 46666899999999999 99999999874
No 446
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=21.28 E-value=7.3e+02 Score=23.78 Aligned_cols=63 Identities=11% Similarity=0.108 Sum_probs=36.7
Q ss_pred chhHHHHHHHHcCCeeEEEEecCCccccCHHHHH---HHhhhCCeEEEEeeccCCcccccCHHHHHHHHHHh
Q 010897 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV---ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (498)
Q Consensus 163 ~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~L~---~~i~~~t~~v~~~~~~t~tG~~~~l~~I~~la~~~ 231 (498)
.|.++..+++.+|+++..+.-...+....+.+|. +.+.++-.-++++.++.+. +.+..++++.
T Consensus 177 ~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~------~~~~~la~~~ 242 (282)
T cd01017 177 QHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS------KIAETLAKET 242 (282)
T ss_pred ecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh------HHHHHHHHHc
Confidence 6778888899999997765422112345555554 4455443334445555443 3445577888
No 447
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.80 E-value=5.1e+02 Score=21.72 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=43.5
Q ss_pred cCCchhHHHHHHHHcCCeeEEEEecCCccccCHH---HHHHHhhh--CCeEEEEeeccCCc-----ccc---cCHHHHHH
Q 010897 160 GANVQVCWEKFARYFEVELKEVKLEEGYYVMNPV---KAVELVDE--NTICVAAILGSTLT-----GEF---EDVKLLHD 226 (498)
Q Consensus 160 s~~~h~~~~~~~~~~g~~~~~v~~~~~~~~~d~~---~L~~~i~~--~t~~v~~~~~~t~t-----G~~---~~l~~I~~ 226 (498)
+.|...+...+++.+|+....||+... .++.+ ...+++++ .|.+..+-.|+-.+ |.. .+.++|.+
T Consensus 43 ~QP~~~~i~~aa~~aGl~y~~iPV~~~--~iT~~dV~~f~~Al~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~de~~a 120 (130)
T COG3453 43 GQPGFAAIAAAAEAAGLTYTHIPVTGG--GITEADVEAFQRALDEAEGPVLAYCRSGTRSLNLYGLGELDGGMSRDEIEA 120 (130)
T ss_pred CCCChHHHHHHHHhcCCceEEeecCCC--CCCHHHHHHHHHHHHHhCCCEEeeecCCchHHHHHHHHHHhcCCCHHHHHH
Confidence 345667888899999999999999753 46555 45566654 45554444444333 111 35566666
Q ss_pred HHHHh
Q 010897 227 LLTKK 231 (498)
Q Consensus 227 la~~~ 231 (498)
+.+.+
T Consensus 121 ~g~a~ 125 (130)
T COG3453 121 LGQAA 125 (130)
T ss_pred HHHhh
Confidence 66555
No 448
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=20.03 E-value=3.6e+02 Score=20.72 Aligned_cols=56 Identities=13% Similarity=0.019 Sum_probs=40.3
Q ss_pred EEcCCchhHHHHHHHHcCCe----eEEEEecCCccccCHHHHHHHhhhCCeEEEEeeccC
Q 010897 158 VTGANVQVCWEKFARYFEVE----LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (498)
Q Consensus 158 v~s~~~h~~~~~~~~~~g~~----~~~v~~~~~~~~~d~~~L~~~i~~~t~~v~~~~~~t 213 (498)
|+...-.--..|++..+.+. ...+-+.+|+-.+|-++.=..+.+||.+|++..|..
T Consensus 18 V~A~sL~eL~~K~~~~l~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~l~~L~~gq~ 77 (80)
T cd06536 18 VAASSLEELRIKACESLGFDSSSAPITLVLAEDGTIVEDEDYFLCLPPNTKFVLLAENEK 77 (80)
T ss_pred EEcCCHHHHHHHHHHHhCCCCCCCceEEEEecCCcEEccHHHHhhCCCCcEEEEECCCCc
Confidence 33444455667888888775 356666666567888888888999999988876643
Done!