BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010899
(498 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 208/438 (47%), Gaps = 29/438 (6%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
+++ IPPG GLP +GETL F+ + F + R ++G F+T +F +F S
Sbjct: 9 NSLPIPPGDFGLPWLGETLNFLNDGD-------FGKKRQQQFGPIFKTRLFGKNVIFISG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT 153
A + + E E F + S ++G N++ + H+ R L F +L +
Sbjct: 62 ALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYL 121
Query: 154 KQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYD 213
+ D +V L W KA V+ + ++TF + + + + ++ T +
Sbjct: 122 PKMDGIVQGYLEQW-GKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYI-Q 179
Query: 214 AMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRA 273
+ + P+ LP T F + +AR ++ LEK+I R++ + ED L LLA A D +
Sbjct: 180 GLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLA--ARDDNN- 236
Query: 274 XXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFP 333
+ L+ E++D IL ++ AG +T SA++ L ++ ++ ++++ E
Sbjct: 237 ----------QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK 286
Query: 334 LMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVN 393
L + LT E L +MPY +V++E LR+ V R +I DC+ +G+ GW V+
Sbjct: 287 LQLSQE---LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVS 343
Query: 394 IDAKSIHLDSTVHSNPYKFNPSRFDGDES----KPYGSIPFSMGGRACLGMHMAKAMMLV 449
H D ++ +P KF+P RF D S P+ +PF G R CLG A+ M +
Sbjct: 344 YQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKL 403
Query: 450 FLHRLITTYKWEMIDSDS 467
F RLI + W ++ +
Sbjct: 404 FATRLIQQFDWTLLPGQN 421
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 183/405 (45%), Gaps = 26/405 (6%)
Query: 74 KYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSV------LC 127
KYG R N+F T+V +S + K L + N + +++ + G+ C
Sbjct: 22 KYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSEC 81
Query: 128 ASTQRHKLIRSRLANL-FSLSSLSIFTKQFDQLVLENLSDWEHKA--ATVVVLREALKVT 184
+ HK + R+ +L FS SSL + F++ + + E KA T V +++ L T
Sbjct: 82 NYERWHK--QRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDML--T 137
Query: 185 FKAMCKILLSLESGKELEML---ENDVTRVYDAMLA--FPLKLPWTKFYRGVKARKRIMR 239
+ AM IL G E ML + +++ ML + KF G RK++
Sbjct: 138 YTAM-DILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPG--KRKQLRE 194
Query: 240 TLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMI 299
E + +R+ G + + + L + V D E + DE + DN +T
Sbjct: 195 VRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQD--DEGLLDNFVTFF 252
Query: 300 IAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVK 359
IAG +T+A+ + + V LS E++ +L+AE ++ K L EDL R+ Y S+V+K
Sbjct: 253 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI--GSKRYLDFEDLGRLQYLSQVLK 310
Query: 360 ESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDG 419
ESLR+ RL+ + I+G + + + T +P FNP RF
Sbjct: 311 ESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGP 370
Query: 420 DESKP-YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
KP + PFS+G R+C+G A+ + V + +L+ ++ ++
Sbjct: 371 GAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 186/456 (40%), Gaps = 58/456 (12%)
Query: 37 SIPPGSEGLPLIGETLQFMA-AINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTG 95
++P G + P I + F+ AI + +F++ + KYG F + T + +
Sbjct: 5 TLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSD 64
Query: 96 AAKIILNNEGENFTKRYIKS------VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSL 149
AA ++ N++ E+ + S G+ V + ++ K+++S L +
Sbjct: 65 AAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHV 124
Query: 150 SIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLES----GKELE-ML 204
SI K+ E W K F+A+ ++++ S GKE+ L
Sbjct: 125 SIIEKE----TKEYFESWGESGE---------KNVFEALSELIILTASHCLHGKEIRSQL 171
Query: 205 ENDVTRVY--------DAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
V ++Y A P LP F R +A + I K I RR+ E +
Sbjct: 172 NEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKID 231
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKY 316
D LQ LL DA KD + LTD+E+ ++ +++AGQ T+++ WM +
Sbjct: 232 DILQTLL--DATYKDG-----------RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFF 278
Query: 317 LSENEEVLDKLKAEHFPLMERTKKSLL--TLEDLNRMPYASKVVKESLRMASIVAWYPRL 374
L+ ++ + K E + L L+DLN + + +KE+LR+ + R+
Sbjct: 279 LARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLL---DRCIKETLRLRPPIMIMMRM 335
Query: 375 VIHDCEIEGYVIKAGWSVNIDAKSIHL--DSTVHSNPYKFNPSRFDGDE---SKPYGSIP 429
+ GY I G V + DS V FNP R+ D + + +P
Sbjct: 336 ARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVER--LDFNPDRYLQDNPASGEKFAYVP 393
Query: 430 FSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
F G C+G + A + ++ Y++++ID
Sbjct: 394 FGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG 429
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 185/453 (40%), Gaps = 57/453 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF---T 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA 369
M+KY E V ++++ H P L+D +MPY V+ E R+ ++
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPP---------ALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 370 W-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPY 425
+ P V D + GYVI V S D P FNP F +G +
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
G +PFS+G R CLG +A+ + +F ++ +
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 184/448 (41%), Gaps = 59/448 (13%)
Query: 39 PPGSEGLPLIG-------ETLQFMAAINSSQGFYQFIQVRHLKYGDCFRT-----NIFAT 86
P G+PL+G + L FM+ Q+R +GD R ++A
Sbjct: 25 PVAGGGVPLLGHGWRLARDPLAFMS------------QLR--DHGDVVRIKLGPKTVYAV 70
Query: 87 TNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSL 146
TN TGA + N + +S+ ++G V A+ H+ R + F L
Sbjct: 71 TNPEL--TGALAL---NPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRL 125
Query: 147 SSLSIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKE-LEMLE 205
++ + ++ W+ TV E+ +V + + LL + E E L
Sbjct: 126 DAIPAYGPIMEEEAHALTERWQ-PGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLC 184
Query: 206 NDVTRVYDAM---LAFPL----KLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDF 258
+ V+ M + PL +LP R A + ++++I RR + +D
Sbjct: 185 VALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDL 244
Query: 259 LQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLS 318
L LL + D + ++EI D ++ ++ G +T AS I W+++ L+
Sbjct: 245 LTALLEAKDDNGD-------------PIGEQEIHDQVVAILTPGSETIASTIMWLLQALA 291
Query: 319 ENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHD 378
++ E D+++ E + T + ED+ ++ + V+ E++R+ V R + +
Sbjct: 292 DHPEHADRIRDE---VEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAE 348
Query: 379 CEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES---KPYGSIPFSMGGR 435
E+ GY I AG + +I D + + +F+P R+ + + Y PFS G R
Sbjct: 349 SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKR 408
Query: 436 ACLGMHMAKAMMLVFLHRLITTYKWEMI 463
C H + A + + L T Y++E +
Sbjct: 409 KCPSDHFSMAQLTLITAALATKYRFEQV 436
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 185/453 (40%), Gaps = 57/453 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF---T 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA 369
M+KY E V ++++ H P L+D +MPY V+ E R+ ++
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPP---------ALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 370 W-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPY 425
+ P V D + GYVI V S D P FNP F +G +
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
G +PFS+G R CLG +A+ + +F ++ +
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 185/453 (40%), Gaps = 57/453 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF---T 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA 369
M+KY E V ++++ H P L+D +MPY V+ E R+ ++
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPP---------ALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 370 W-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPY 425
+ P V D + GYVI V S D P FNP F +G +
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
G +PFS+G R CLG +A+ + +F ++ +
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 203/491 (41%), Gaps = 58/491 (11%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 17 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 70
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 71 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 128
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 129 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 183
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 184 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 241
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ ++ D+ + E+ K L+D E+ + I AG +TT+S +
Sbjct: 242 TQKHRVDFLQLMI--DSQNSKET-------ESHKALSDLELVAQSIIFIFAGYETTSSVL 292
Query: 311 TWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW 370
++++ L+ + +V KL+ E ++ K+ T + + +M Y VV E+LR+ I
Sbjct: 293 SFIMYELATHPDVQQKLQEEIDAVL--PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR 350
Query: 371 YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGS 427
R+ D EI G I G V I + ++H D + P KF P RF + D PY
Sbjct: 351 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIY 410
Query: 428 IPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVK 487
PF G R C+GM A M + L R++ + ++ K ++ L+ P+ +K
Sbjct: 411 TPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLK 470
Query: 488 STNMKDKAAAA 498
+ + A
Sbjct: 471 VESRDGTVSGA 481
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 203/491 (41%), Gaps = 58/491 (11%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 18 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 71
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 72 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 129
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 130 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 184
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 185 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 242
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ ++ D+ + E+ K L+D E+ + I AG +TT+S +
Sbjct: 243 TQKHRVDFLQLMI--DSQNSKET-------ESHKALSDLELVAQSIIFIFAGYETTSSVL 293
Query: 311 TWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW 370
++++ L+ + +V KL+ E ++ K+ T + + +M Y VV E+LR+ I
Sbjct: 294 SFIMYELATHPDVQQKLQEEIDAVL--PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR 351
Query: 371 YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGS 427
R+ D EI G I G V I + ++H D + P KF P RF + D PY
Sbjct: 352 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIY 411
Query: 428 IPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVK 487
PF G R C+GM A M + L R++ + ++ K ++ L+ P+ +K
Sbjct: 412 TPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLK 471
Query: 488 STNMKDKAAAA 498
+ + A
Sbjct: 472 VESRDGTVSGA 482
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 203/491 (41%), Gaps = 58/491 (11%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 19 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 72
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 73 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 130
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 131 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 185
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 186 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 243
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ ++ D+ + E+ K L+D E+ + I AG +TT+S +
Sbjct: 244 TQKHRVDFLQLMI--DSQNSKET-------ESHKALSDLELVAQSIIFIFAGYETTSSVL 294
Query: 311 TWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW 370
++++ L+ + +V KL+ E ++ K+ T + + +M Y VV E+LR+ I
Sbjct: 295 SFIMYELATHPDVQQKLQEEIDAVL--PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR 352
Query: 371 YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGS 427
R+ D EI G I G V I + ++H D + P KF P RF + D PY
Sbjct: 353 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIY 412
Query: 428 IPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVK 487
PF G R C+GM A M + L R++ + ++ K ++ L+ P+ +K
Sbjct: 413 TPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLK 472
Query: 488 STNMKDKAAAA 498
+ + A
Sbjct: 473 VESRDGTVSGA 483
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 22/350 (6%)
Query: 120 VGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLRE 179
+GD S+L + + KL RS L L + SS+ + Q Q E + A V + +E
Sbjct: 110 LGDYSLLWKAHK--KLTRSALL-LGTRSSMEPWVDQLTQEFCERMR--VQAGAPVTIQKE 164
Query: 180 ALKVTFKAMCKILLSLESGKELEMLEN-------DVTRVYDAMLAFPLKL-PWTKFYRGV 231
+T C I+ L G + + L + D+ + +D L + P+ +F+
Sbjct: 165 FSLLT----CSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN- 219
Query: 232 KARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKD-RAXXXXXXXETPKKLTDEE 290
R+ + +E ++ K L H++ + D D + E P +L +
Sbjct: 220 PGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGH 279
Query: 291 IQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE-HFPLMERTKKSLLTLEDLN 349
+ +++ + I G +TTAS ++W V +L + E+ +L+ E L S +T +D
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRA 339
Query: 350 RMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSN 408
R+P + + E LR+ +V P I GY I G V + + HLD TV
Sbjct: 340 RLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQ 399
Query: 409 PYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
P++F P RF + P ++ F G R CLG +A+ + V L RL+ +
Sbjct: 400 PHEFRPDRFLEPGANP-SALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 184/453 (40%), Gaps = 57/453 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF---T 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K + G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA 369
M+KY E V ++++ H P L+D +MPY V+ E R+ ++
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPP---------ALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 370 W-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPY 425
+ P V D + GYVI V S D P FNP F +G +
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
G +PFS+G R CLG +A+ + +F ++ +
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 184/453 (40%), Gaps = 57/453 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF---T 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA 369
M+KY E V ++++ H P L+D +MPY V+ E R+ ++
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPP---------ALDDRAKMPYTDAVIHEIQRLGDLIP 345
Query: 370 W-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPY 425
+ P V D + GYVI V S D P FNP F +G +
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
G +PFS+G R C G +A+ + +F ++ +
Sbjct: 406 GFMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 195/471 (41%), Gaps = 61/471 (12%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP+IG LQ + + + F F +V YG F V F A
Sbjct: 11 LPPGPTPLPIIGNMLQ-IDVKDICKSFTNFSKV----YGPVFTVYFGMNPIVVFHGYEAV 65
Query: 98 KIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQF 156
K L + GE F+ R + + I ++ ++ +R K IR FSL++L F
Sbjct: 66 KEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRR-----FSLTTLRNFG--- 117
Query: 157 DQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLESGKELEMLEND 207
+ ++ D + A +V LR+ TF A C ++ S+ K + + +
Sbjct: 118 --MGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQN 175
Query: 208 ---VTRVYDAMLAFPLKLPWTKFYRGVK--------ARKRIMRTLEKMINIRRKGLETHE 256
+ + ++ L PW + ++++ + + R+ ++ H+
Sbjct: 176 FLTLMKRFNENFRI-LNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQ 234
Query: 257 ---------DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTA 307
DF+ C L + +KD + E + + + +AG +TT+
Sbjct: 235 ASLDVNNPRDFIDCFLIKMEQEKDNQK---------SEFNIENLVGTVADLFVAGTETTS 285
Query: 308 SAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASI 367
+ + + + L ++ EV K++ E ++ R + + +D + MPY VV E R + +
Sbjct: 286 TTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCM--QDRSHMPYTDAVVHEIQRYSDL 343
Query: 368 VA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESK 423
V P V D + Y+I G ++ S+ D NP F+P F +G+ K
Sbjct: 344 VPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKK 403
Query: 424 PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAM 474
+PFS G R C G +A+ + +FL ++ + + +D +++ A+
Sbjct: 404 SDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAV 454
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
+ E + ++ +IIAG +TT + + W + +++ + +++ E +M K +
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--SW 326
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIH----DCEIEGYVIKAGWSVNIDAKSIHL 401
+D +MPY V+ E LR +IV P + H D + GY I G +V + S+H
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIV---PLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHF 383
Query: 402 DSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
D +P F+P RF G +K +PFS+G R CLG H+A+ M +F L+ +
Sbjct: 384 DEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 180/459 (39%), Gaps = 65/459 (14%)
Query: 65 YQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNS 124
Y F Q+R ++GD F + T V + A + L GE+ R + +I+G
Sbjct: 34 YCFDQLRR-RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILG--- 89
Query: 125 VLCASTQRHKLIR-------SRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVL 177
+Q L R R ++ +L +L + K +Q V E A
Sbjct: 90 -FGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEE------AACLCAAF 142
Query: 178 REALKVTF-------KAMCKILLSLESGKELEMLENDVTRVYD---------------AM 215
F KA+ ++ SL G+ E + R+ D +
Sbjct: 143 ANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL 202
Query: 216 LAFPLKLPWTKFYRGV-KARKRIMRTLEKMINIRR---KGLETHEDFLQCLLAEDAVDKD 271
A P+ L V + +K + L++++ R + D + LAE ++K
Sbjct: 203 NAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAE--MEKA 260
Query: 272 RAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEH 331
+ DE ++ + + AG TT++ + W + + + +V +++ E
Sbjct: 261 KGNPE-------SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEI 313
Query: 332 FPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIH----DCEIEGYVIK 387
++ + ++ + D MPY + V+ E R IV P V H D E++G+ I
Sbjct: 314 DDVIGQVRRP--EMGDQAHMPYTTAVIHEVQRFGDIV---PLGVTHMTSRDIEVQGFRIP 368
Query: 388 AGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHMAK 444
G ++ + S+ D V P++F+P F G KP +PFS G RACLG +A+
Sbjct: 369 KGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLAR 428
Query: 445 AMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCP 483
+ +F L+ + + + +FA L S P
Sbjct: 429 MELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSP 467
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
+ E + ++ +IIAG +TT + + W + +++ + +++ E +M K +
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--SW 326
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIH----DCEIEGYVIKAGWSVNIDAKSIHL 401
+D +MPY V+ E LR +IV P + H D + GY I G +V + S+H
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIV---PLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHF 383
Query: 402 DSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
D +P F+P RF G +K +PFS+G R CLG H+A+ M +F L+ +
Sbjct: 384 DEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 175/459 (38%), Gaps = 65/459 (14%)
Query: 65 YQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNS 124
Y F Q+R ++GD F + T V + A + L GE+ R + +I+G
Sbjct: 34 YCFDQLRR-RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILG--- 89
Query: 125 VLCASTQRHKLIR-------SRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVL 177
+Q L R R ++ +L +L + K +Q V E A
Sbjct: 90 -FGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEE------AACLCAAF 142
Query: 178 REALKVTF-------KAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRG 230
F KA+ ++ SL G+ E + R+ D G
Sbjct: 143 ANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLA------------QEG 190
Query: 231 VKARKRIMRTLEKMINIRR-------KGLETHEDFLQCL---LAEDAVDKDRAXXXXXXX 280
+K +R + + + R K L + FL L L E + D A
Sbjct: 191 LKEESGFLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLT 250
Query: 281 ET-----------PKK-LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLK 328
E P+ DE ++ + + AG TT++ + W + + + +V +++
Sbjct: 251 EAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ 310
Query: 329 AEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIK 387
E ++ + ++ + D MPY + V+ E R IV + D E++G+ I
Sbjct: 311 QEIDDVIGQVRRP--EMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIP 368
Query: 388 AGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHMAK 444
G ++ + S+ D V P++F+P F G KP +PFS G RACLG +A+
Sbjct: 369 KGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLAR 428
Query: 445 AMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCP 483
+ +F L+ + + + +FA L S P
Sbjct: 429 MELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSP 467
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+L+DE+I + +L + AG DT +AI+W + YL N V K++ E ++ R+++ L+
Sbjct: 274 QLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLS 333
Query: 345 LEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
D + +PY + E+ R +S V + P D ++G+ I G V ++ I+ D
Sbjct: 334 --DRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQ 391
Query: 404 TVHSNPYKFNPSRF---DG--DESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+ NP +F P RF DG D+ I F MG R C+G +A+ + +FL L+
Sbjct: 392 KLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILL 448
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 196/481 (40%), Gaps = 41/481 (8%)
Query: 29 MLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTN 88
M + S+ PPG LP+IG LQ + + S+ +V YG F
Sbjct: 1 MAKKTSSKGRPPGPTPLPVIGNILQ-IGIKDISKSLTNLSKV----YGPVFTLYFGLKPI 55
Query: 89 VFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN-SVLCASTQRHKLIRSRLANLFSLS 147
V A K L + GE F+ R I + E ++ ++ ++ K IR FSL
Sbjct: 56 VVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRR-----FSLM 110
Query: 148 SLSIFTKQFDQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLESG 198
+L F + ++ D + A +V LR+ TF A C ++ S+
Sbjct: 111 TLRNFG-----MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFH 165
Query: 199 KELEMLENDVTRVYDAMLAFP--LKLPWTKFYRGVKA--------RKRIMRTLEKMINIR 248
K + + + + + L PW + Y A ++++ + M +
Sbjct: 166 KRFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYI 225
Query: 249 RKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTAS 308
+ ++ H++ + +D +D P + T E +++ + + AG +TT++
Sbjct: 226 LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTST 285
Query: 309 AITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIV 368
+ + + L ++ EV K++ E ++ R + ++D + MPY VV E R ++
Sbjct: 286 TLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--CMQDRSHMPYTDAVVHEVQRYIDLL 343
Query: 369 AW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKP 424
P V D + Y+I G ++ I S+ D+ NP F+P F G+ K
Sbjct: 344 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 403
Query: 425 YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPI 484
+PFS G R C+G +A + +FL ++ + + + ++D + S P
Sbjct: 404 KYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPF 463
Query: 485 H 485
+
Sbjct: 464 Y 464
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 198/485 (40%), Gaps = 47/485 (9%)
Query: 27 KKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFAT 86
KK GR +PPG LP+IG LQ + + S+ +V YG F
Sbjct: 3 KKTSSGRG--KLPPGPTPLPVIGNILQ-IGIKDISKSLTNLSKV----YGPVFTLYFGLK 55
Query: 87 TNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN-SVLCASTQRHKLIRSRLANLFS 145
V A K L + GE F+ R I + E ++ ++ ++ K IR FS
Sbjct: 56 PIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRR-----FS 110
Query: 146 LSSLSIFTKQFDQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLE 196
L +L F + ++ D + A +V LR+ TF A C ++ S+
Sbjct: 111 LMTLRNFG-----MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSII 165
Query: 197 SGKELEMLENDVTRVYDAMLAF--PLKLPWTK----------FYRGVKARKRIMRTLEKM 244
K + + + + + L PW + ++ G ++++ + M
Sbjct: 166 FHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG--THNKLLKNVAFM 223
Query: 245 INIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQD 304
+ + ++ H++ + +D +D P + T E +++ + + AG +
Sbjct: 224 KSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTE 283
Query: 305 TTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRM 364
TT++ + + + L ++ EV K++ E ++ R + ++D + MPY VV E R
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--CMQDRSHMPYTDAVVHEVQRY 341
Query: 365 ASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGD 420
++ P V D + Y+I G ++ I S+ D+ NP F+P F G+
Sbjct: 342 IDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN 401
Query: 421 ESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKS 480
K +PFS G R C+G +A + +FL ++ + + + ++D + S
Sbjct: 402 FKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFAS 461
Query: 481 GCPIH 485
P +
Sbjct: 462 VPPFY 466
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 178/452 (39%), Gaps = 26/452 (5%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG P+IG LQ + A + S+ +F + YG F + V A
Sbjct: 11 LPPGPTPFPIIGNILQ-IDAKDISKSLTKFSEC----YGPVFTVYLGMKPTVVLHGYEAV 65
Query: 98 KIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQF- 156
K L + GE F R + E V + S + R +L +L + + +
Sbjct: 66 KEALVDLGEEFAGRGSVPILEKVSKGLGIAFSNAK-TWKEMRRFSLMTLRNFGMGKRSIE 124
Query: 157 DQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAML 216
D++ E E T + + A C ++ S+ + + + ++ +++
Sbjct: 125 DRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLH 184
Query: 217 AFP--LKLPWTKFYRGVKA--------RKRIMRTLEKMINIRRKGLETHEDFLQCLLAED 266
L PW + Y A K +++ + + N + ++ H+ L D
Sbjct: 185 ENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRD 244
Query: 267 AVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDK 326
+D E + T E + + + AG +TT++ + + + L ++ EV +
Sbjct: 245 FID---CFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAAR 301
Query: 327 LKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYV 385
++ E ++ R + ++D +RMPY V+ E R ++ P V D Y
Sbjct: 302 VQEEIERVIGRHRSP--CMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYF 359
Query: 386 IKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHM 442
I G + S+ D NP F+P F G+ K +PFS G R C+G +
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGL 419
Query: 443 AKAMMLVFLHRLITTYKWEMIDSDSSIDKWAM 474
A+ + +FL ++ +K + + +D A+
Sbjct: 420 ARMELFLFLTSILQNFKLQSLVEPKDLDITAV 451
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 175/436 (40%), Gaps = 53/436 (12%)
Query: 67 FIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKR-YIKSVGEIVGDNSV 125
F++ R KYGD F ++ V A + L ++ E F+ R I V V
Sbjct: 36 FLRFRE-KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGV 94
Query: 126 LCASTQRHKLIRSRLANLFSLSSLSIF----------TKQFDQLVLENLSDWEHKAATVV 175
+ A+ R K++R FS++++ F ++ Q ++E L +
Sbjct: 95 IFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPT 149
Query: 176 VLREALKVTFKAMCKILLS----LESGKELEMLE------NDVTRVYDAMLAFPLKLPWT 225
L ++ +T +C I+ + + L+ML + ++ V+ + F L +
Sbjct: 150 FLFQS--ITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQL--FELFSGFL 205
Query: 226 KFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKK 285
K + G A +++ + L+++ +E H + L D +D +
Sbjct: 206 KHFPG--AHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSE 263
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITW----MVKYLSENEEV---LDKLKAEHFPLMERT 338
+ + + N L++ AG +TT++ + + M+KY E V ++++ H P
Sbjct: 264 FSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPP---- 319
Query: 339 KKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAK 397
L D +MPY V+ E R + ++ P +V GY+I V +
Sbjct: 320 -----ELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILS 374
Query: 398 SIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRL 454
+ D P FNP F +G K IPFS+G R CLG +A+A + +F +
Sbjct: 375 TALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTI 434
Query: 455 ITTYKWEMIDSDSSID 470
+ + + ID
Sbjct: 435 LQNFSMASPVAPEDID 450
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 187/472 (39%), Gaps = 60/472 (12%)
Query: 24 MNTKKMLRGRSTVSI--PPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRT 81
M K LR R + PP G PL+G L N + Q +YGD +
Sbjct: 1 MAVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTL--GKNPHLALSRMSQ----RYGDVLQI 54
Query: 82 NIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKL--IRSR 139
I +T + S + L +G++F R ++ D L ST + R R
Sbjct: 55 RIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRR 114
Query: 140 LA----NLFSLSS-------------LSIFTKQFDQLVLENLSDWEHKAATVVVLREALK 182
LA N FS++S +S K + E ++ H V+
Sbjct: 115 LAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVAN 174
Query: 183 VTFKAMCKILLSLESGKE-LEMLENDVTRVYDAMLAFPLK-------LPWTKFYRGVKAR 234
V AMC ES E L +++N V A PL LP R
Sbjct: 175 V-IGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFN 233
Query: 235 KRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
+R + L+K + E ++DF +++V + P+ + Q+
Sbjct: 234 QRFLWFLQKTVQ------EHYQDF-----DKNSVRDITGALFKHSKKGPRASGNLIPQEK 282
Query: 295 ILTMII----AGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR 350
I+ ++ AG DT +AI+W + YL E+ K++ E ++ R ++ L+ D +
Sbjct: 283 IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLS--DRPQ 340
Query: 351 MPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
+PY + E+ R +S + + P D + G+ I V ++ ++ D + +P
Sbjct: 341 LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDP 400
Query: 410 YKFNPSRF---DGDE-SKPYGS--IPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+F P RF DG +KP + F MG R C+G +AK + +FL L+
Sbjct: 401 SEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILL 452
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
K++ E+I+ N+ M+ G DTT+ + W + ++ N +V D L+AE + + + T
Sbjct: 267 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMAT 326
Query: 345 LEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
+ L +P +KE+LR+ I R +++D + Y+I A V + ++ + T
Sbjct: 327 M--LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 384
Query: 405 VHSNPYKFNPSRF-DGDESKPY-GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEM 462
+P F+P+R+ D++ Y ++ F G R CLG +A+ M +FL ++ ++ E+
Sbjct: 385 FFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
K++ E+I+ N+ M+ G DTT+ + W + ++ N +V D L+AE + + + T
Sbjct: 270 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMAT 329
Query: 345 LEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
+ L +P +KE+LR+ I R +++D + Y+I A V + ++ + T
Sbjct: 330 M--LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 387
Query: 405 VHSNPYKFNPSRF-DGDESKPY-GSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEM 462
+P F+P+R+ D++ Y ++ F G R CLG +A+ M +FL ++ ++ E+
Sbjct: 388 FFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 447
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 182/460 (39%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L + L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLGI-FQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDNI-----------LTMIIAGQDTTASAITWMV 314
+ D ++ +EE N L + I G +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++ R
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYMEAVIHEIQRFGDVIPMSLAR 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D + SNP FNP F G K +PF
Sbjct: 351 RVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++ + S ID
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 182/460 (39%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L + L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLGI-FQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDNI-----------LTMIIAGQDTTASAITWMV 314
+ D ++ +EE N L + I G +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++ R
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYMEAVIHEIQRFGDVIPMSLAR 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D + SNP FNP F G K +PF
Sbjct: 351 RVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++ + S ID
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 182/460 (39%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L + L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLGI-FQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDNI-----------LTMIIAGQDTTASAITWMV 314
+ D ++ +EE N L + I G +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++ R
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYMEAVIHEIQRFGDVIPMSLAR 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D + SNP FNP F G K +PF
Sbjct: 351 RVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++ + S ID
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 182/460 (39%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L + L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLGI-FQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDNI-----------LTMIIAGQDTTASAITWMV 314
+ D ++ +EE N L + + G +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++ R
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYMEAVIHEIQRFGDVIPMSLAR 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D + SNP FNP F G K +PF
Sbjct: 351 RVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++ + S ID
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 180/460 (39%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A K L ++ E F+ R ++ + + V ++ +R K +R FS+++L F
Sbjct: 62 HDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRR-----FSIATLRGF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYED 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L K L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLG-SFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDNI-----------LTMIIAGQDTTASAITWMV 314
+ D ++ +EE N L + AG +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAH 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D SNP FNP F G K +PF
Sbjct: 351 RVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++++ S ID
Sbjct: 411 SIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDID 450
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 193/466 (41%), Gaps = 76/466 (16%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
LPL+G +L F+ + +Q KYG + + T V AK +L +
Sbjct: 16 LPLVG-SLPFLPRHGHMHNNFFKLQK---KYGPIYSVRMGTKTTVIVGHHQLAKEVLIKK 71
Query: 105 GENFTKRYIKSVGEIVGDN--SVLCASTQRHKLIRSRLANLFSLSSLSIFT---KQFDQL 159
G++F+ R + +I +N + A + H + RLA +++ ++F ++ +++
Sbjct: 72 GKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLA----MATFALFKDGDQKLEKI 127
Query: 160 VLENLSDWEHKAATVVVLREALKVTFKAMCKI--LLSL--------ESGKELEMLENDVT 209
+ + +S AT +++ ++F + ++SL EL +++N
Sbjct: 128 ICQEISTLCDMLATHN--GQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE 185
Query: 210 RVYDAMLAFPLK--LPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDA 267
+ D + L +PW K + +TLEK+ + ++ D L +L E+
Sbjct: 186 GIIDNLSKDSLVDLVPWLKIFPN--------KTLEKL----KSHVKIRNDLLNKIL-ENY 232
Query: 268 VDKDRAXXXXXXXET--------------PKK----LTDEEIQDNILTMIIAGQDTTASA 309
+K R+ +T P + L+D I I + AG +TT S
Sbjct: 233 KEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSV 292
Query: 310 ITWMVKYLSENEEVLDKLKAE--HFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASI 367
+ W + +L N +V KL E RT T+ D NR+ ++E LR+ +
Sbjct: 293 VKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTP----TISDRNRLLLLEATIREVLRLRPV 348
Query: 368 VAWYPRLVIH----DCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGD 420
P L+ H D I + + G V I+ ++H + P +F P RF G
Sbjct: 349 A---PMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGT 405
Query: 421 E--SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMID 464
+ S +PF G R+C+G +A+ + + + L+ + E+ D
Sbjct: 406 QLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPD 451
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 184/460 (40%), Gaps = 39/460 (8%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
Query: 153 TKQFDQLVLENLSDWEHKAATVVVLREA----LKVTF---KAMCKILLSLESGKELEMLE 205
+ + E + E + LR + TF + + ++ S+ G + +
Sbjct: 117 GVG-KRGIEERIQ--EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 206 NDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAE 265
+ + ML + T + + +M+ L + L+ EDF+ +
Sbjct: 174 KEFLSLLRMMLG-SFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 266 DAVDKDRAXXXXXXXETPKKLTDEEIQDN--------ILTMI---IAGQDTTASAITWMV 314
+ D ++ +EE N ++T + AG +T ++ + +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGF 292
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPR 373
L ++ EV K+ E ++ + ++ ED +MPY V+ E R ++ R
Sbjct: 293 LLLMKHPEVEAKVHEEIDRVIGKNRQP--KFEDRAKMPYMEAVIHEIQRFGDVIPMGLAR 350
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPF 430
V D + + + G V S+ D + SNP FNP F G K +PF
Sbjct: 351 RVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPF 410
Query: 431 SMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
S+G R C G +A+ + +F ++ ++ + S ID
Sbjct: 411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L+ +E+ + + +A +TTA+++ W++ LS N + +L E ++ +
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP--RA 336
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV 405
EDL MPY +KES+R+ V + R + + Y + G + ++ + +
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 406 HSNPYKFNPSRFDGDESK--PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
+ +KF P R+ E K P+ +PF +G R C+G +A+ + + L +I Y
Sbjct: 397 FEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 451
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 165/450 (36%), Gaps = 56/450 (12%)
Query: 38 IPPGSEGL-PLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGA 96
+PP G P +G +QF + F+ KYG F NI
Sbjct: 4 LPPVVHGTTPFVGHIIQF------GKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQ 57
Query: 97 AKIILNNEGENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQ 155
E + R + S + + G+ A R + + LA +++ F
Sbjct: 58 HSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPS 117
Query: 156 FDQLVLENL-SDWEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDV 208
V + + ++W + +L + + C+ L + K L ++L
Sbjct: 118 IQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLLAKME 177
Query: 209 TRVYDAMLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCL 262
+ + A + P LKLP + YR AR + L ++I R K + D L L
Sbjct: 178 SCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGL 237
Query: 263 LAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SEN 320
L AV +D +++ E+ I+ + AGQ T+ TW + +L N
Sbjct: 238 LG--AVYRDGT-----------RMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRN 284
Query: 321 EEVLDKLKAE--HFPLMERTKKSLLTLED-LNRMPYASKVVKESLRMASIVAWYPRLVIH 377
+ L KL E FP + L ++ + MP+A + +ES+R + R V+
Sbjct: 285 KRHLAKLHQEIDEFP-------AQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLK 337
Query: 378 DCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSR----FDGDESKPYGSIPFSMG 433
++ YV+ G + H D NP ++NP R DG F G
Sbjct: 338 PVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDG------AFCGFGAG 391
Query: 434 GRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
C+G + L ++ Y +E++
Sbjct: 392 VHKCIGEKFGLLQVKTVLATVLRDYDFELL 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 317
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ V + D + G Y ++ G + + +H D T+ + +F
Sbjct: 318 GMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 378 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLH----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +T+ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D TV + +F
Sbjct: 316 GMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKY 316
DF+ C L + +K + T E + ++ AG +TT++ + + +
Sbjct: 245 DFIDCFLIKMEKEKQNQQ---------SEFTIENLVITAADLLGAGTETTSTTLRYALLL 295
Query: 317 LSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLV 375
L ++ EV K++ E ++ R + ++D MPY VV E R ++ P V
Sbjct: 296 LLKHPEVTAKVQEEIERVVGRNRSP--CMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAV 353
Query: 376 IHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF---DGDESKPYGSIPFSM 432
D + Y+I G ++ S+ D+ NP F+P F G+ K +PFS
Sbjct: 354 TCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSA 413
Query: 433 GGRACLGMHMAKAMMLVFLHRLITTYKWEM------IDSDSSIDKWAMFARLKSGC--PI 484
G R C+G +A+ + +FL ++ + + +D+ ++ +A C PI
Sbjct: 414 GKRICVGEGLARMELFLFLTFILQNFNLKSLIDPKDLDTTPVVNGFASVPPFYQLCFIPI 473
Query: 485 H 485
H
Sbjct: 474 H 474
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 176/473 (37%), Gaps = 66/473 (13%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP+IG Q + N + F + Q ++G F + + V
Sbjct: 7 SKGKLPPGPFPLPIIGNLFQ-LELKNIPKSFTRLAQ----RFGPVFTLYVGSQRMVVMHG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT 153
A K L + + F+ R D ++ + K IR FSL++L
Sbjct: 62 YKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRR-----FSLTTL---- 112
Query: 154 KQFDQLVLENLSDWEHKAATVV-VLREALKVTFK-------AMCKILLSLESGKELEMLE 205
+ + N S + +A ++ LR+ F A C ++ + K + +
Sbjct: 113 RNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYND 172
Query: 206 NDVTRVYDAMLAFP-----LKLPWTKFYRGVKA---------RKRIMRTLEKMINIRRKG 251
R+ M F L PW + Y + RK I E + +
Sbjct: 173 EKFLRL---MYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERV 229
Query: 252 LETHE--------DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQ 303
E H+ D CLL E +K A + T + I + + AG
Sbjct: 230 KEHHQSLDPNCPRDLTDCLLVEMEKEKHSAE---------RLYTMDGITVTVADLFFAGT 280
Query: 304 DTTASAITWMVKYLSENEEVLDKLKAEHFPLMERT--KKSLLTLEDLNRMPYASKVVKES 361
+TT++ + + + L + E+ +KL E ++R + ++D MPY VV E
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEE----IDRVIGPSRIPAIKDRQEMPYMDAVVHEI 336
Query: 362 LRMASIV-AWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGD 420
R ++V + P D GY+I G V S+ D+ +P KF P F +
Sbjct: 337 QRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE 396
Query: 421 ESK-PYGSI--PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSID 470
K Y PFS G R C G +A+ + + L ++ + + + ID
Sbjct: 397 NGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDID 449
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 216 KVMNDLVDKIIADRKASGEQSDDLLTHMLH----GKD--------PETGEPLDDENIRYQ 263
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 264 IVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 320
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 321 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEF 380
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 381 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 317
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 318 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 378 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 174/440 (39%), Gaps = 51/440 (11%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 10 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 62
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 63 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 122
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 123 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 182
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 183 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 240
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 241 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 289
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEG 383
L E FP + L ++ ++ MP+A + V+ES+R + R+V + ++
Sbjct: 290 LHKEIDEFP-------AQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGS 342
Query: 384 YVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMA 443
YV+ G + H D NP ++P R DE I F G C+G A
Sbjct: 343 YVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFA 399
Query: 444 KAMMLVFLHRLITTYKWEMI 463
+ L Y ++++
Sbjct: 400 LLQVKTILATAFREYDFQLL 419
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 174/440 (39%), Gaps = 51/440 (11%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 16 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 68
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 69 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 128
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 129 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 188
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 189 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 246
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 247 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 295
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEG 383
L E FP + L ++ ++ MP+A + V+ES+R + R+V + ++
Sbjct: 296 LHKEIDEFP-------AQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGS 348
Query: 384 YVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMA 443
YV+ G + H D NP ++P R DE I F G C+G A
Sbjct: 349 YVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFA 405
Query: 444 KAMMLVFLHRLITTYKWEMI 463
+ L Y ++++
Sbjct: 406 LLQVKTILATAFREYDFQLL 425
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 174/440 (39%), Gaps = 51/440 (11%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 25 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 77
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 78 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 137
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 138 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 197
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 198 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 255
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 256 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 304
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEG 383
L E FP + L ++ ++ MP+A + V+ES+R + R+V + ++
Sbjct: 305 LHKEIDEFP-------AQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGS 357
Query: 384 YVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMA 443
YV+ G + H D NP ++P R DE I F G C+G A
Sbjct: 358 YVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKFA 414
Query: 444 KAMMLVFLHRLITTYKWEMI 463
+ L Y ++++
Sbjct: 415 LLQVKTILATAFREYDFQLL 434
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFL-QCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQD 293
++M L +K+I R+ E +D L Q L +D ET + L D I
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDP-------------ETGEPLDDGNISY 256
Query: 294 NILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
I+T +IAG +TT+ +++ + +L +N VL K+ E ++ + + + + ++ Y
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL---VDPVPSYKQVKQLKY 313
Query: 354 ASKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-K 411
V+ E+LR+ + D + G Y ++ G V + +H D T+ + +
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEE 373
Query: 412 FNPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
F P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 374 FRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 317
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 318 GMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 378 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 179/458 (39%), Gaps = 49/458 (10%)
Query: 29 MLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTN 88
M + S+ PPG PLIG AA F ++ +YGD F+ + +
Sbjct: 1 MAKKTSSKGKPPGPFAWPLIGN-----AAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPI 54
Query: 89 VFFSSTGAAKIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLS 147
V + A L +G F R S + G S+ H ++ R A+ +
Sbjct: 55 VVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRN 114
Query: 148 SLSIFTKQ-FDQLVLENLSDWEHKAATVVVLR--------EALKVTFKAMCKILLSLESG 198
FT+Q + VLE E + +++R + +T A+ ++ ++ G
Sbjct: 115 ---FFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFG 171
Query: 199 ----------KELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMIN-- 246
+EL + R A + +PW +++ + + R E++
Sbjct: 172 CRYSHDDPEFRELLSHNEEFGRTVGAGSLVDV-MPWLQYF--PNPVRTVFREFEQLNRNF 228
Query: 247 ---IRRKGLETHEDFLQCLLAEDAVD----KDRAXXXXXXXETPKKLTDEEIQDNILTMI 299
I K L E D +D +L E + I +
Sbjct: 229 SNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIF 288
Query: 300 IAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVK 359
A QDT ++A+ W++ + +V +++AE ++ R + L + D +PY +
Sbjct: 289 GASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR--LPCMGDQPNLPYVLAFLY 346
Query: 360 ESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRF- 417
E++R +S V P + + GY I V ++ S++ D NP F+P+RF
Sbjct: 347 EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFL 406
Query: 418 --DGDESKPYGS--IPFSMGGRACLGMHMAKAMMLVFL 451
DG +K S + FS+G R C+G ++K + +F+
Sbjct: 407 DKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFI 444
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG ++T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG ++T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + P+ G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG ++T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +I G +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + P+ G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + P G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
+ D+ I + + AG DTT+S+ + LS N E L + ++ +L+
Sbjct: 252 IDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQL---------ALAKSDPALI-- 300
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV 405
++V E++R + V + R + D E+ G IK G + + S + D V
Sbjct: 301 ---------PRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEV 351
Query: 406 HSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYK 459
SNP +F+ +RF P + F G CLG H+AK M +F L+ K
Sbjct: 352 FSNPDEFDITRF------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T +IAG +TT+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + P G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+K+ E+++ NI M+ G +TT+ + W + ++ + V + L+ E + + +
Sbjct: 270 EKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS 329
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+ L +P +KE+LR+ I R D ++ Y+I A V + ++ D
Sbjct: 330 KM--LQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDP 387
Query: 404 TVHSNPYKFNPSRFDGDESK--PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
S+P KF+P+R+ + + ++ F G R C+G +A+ M +FL ++ +K E
Sbjct: 388 AFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVE 447
Query: 462 M 462
M
Sbjct: 448 M 448
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T + AG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T + AG + T+ +++ + +L +N VL K E ++ + + + + ++ Y
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 316 GMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 29/269 (10%)
Query: 212 YDAMLAFP---LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCL-LAEDA 267
+ A+L P K+ W + + K+ K + +E +I +R+ + T E +C+ A +
Sbjct: 224 WQALLIKPDIFFKISWL-YKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATEL 282
Query: 268 VDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKL 327
+ E LT E + IL M+IA DT + ++ +M+ ++++ V + +
Sbjct: 283 I----------LAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAI 332
Query: 328 KAE-HFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVI 386
E + ER K ++D+ ++ + ES+R +V R + D I+GY +
Sbjct: 333 IKEIQTVIGERDIK----IDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPV 388
Query: 387 KAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSI-PFSMGGRACLG----MH 441
K G ++ ++ +H P +F F ++ PY PF G R C G M
Sbjct: 389 KKGTNIILNIGRMH-RLEFFPKPNEFTLENF--AKNVPYRYFQPFGFGPRGCAGKYIAMV 445
Query: 442 MAKAMMLVFLHRL-ITTYKWEMIDSDSSI 469
M KA+++ L R + T + + ++S I
Sbjct: 446 MMKAILVTLLRRFHVKTLQGQCVESIQKI 474
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T + AG + T+ +++ + +L +N L K E ++ + + + + ++ Y
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL---VDPVPSYKQVKQLKYV 314
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D T+ + +F
Sbjct: 315 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 375 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYA 354
I+T + AG + T+ +++ + +L +N L K E ++ + + + + ++ Y
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL---VDPVPSHKQVKQLKYV 315
Query: 355 SKVVKESLRMASIVAWYPRLVIHDCEIEG-YVIKAGWSVNIDAKSIHLDSTVHSNPY-KF 412
V+ E+LR+ + D + G Y ++ G + + +H D TV + +F
Sbjct: 316 GMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 413 NPSRFDGDESKPYGSI-PFSMGGRACLGMHMAKAMMLVFLHRLITTYKWE 461
P RF+ + P + PF G RAC+G A + L ++ + +E
Sbjct: 376 RPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 180/477 (37%), Gaps = 57/477 (11%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 11 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 65
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 66 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 125
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 126 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 179
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 180 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 238
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 239 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 285
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI 381
+ L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 286 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV 341
Query: 382 EGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMH 441
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 342 GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQK 398
Query: 442 MAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKSTNMKDKAAAA 498
+ L +Y ++++ + + + VK ++ KAAAA
Sbjct: 399 FGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKY--IRRKAAAA 453
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 180/477 (37%), Gaps = 57/477 (11%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 12 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 66
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 67 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 126
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 127 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 180
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 181 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 239
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 240 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 286
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI 381
+ L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 287 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV 342
Query: 382 EGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMH 441
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 343 GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQK 399
Query: 442 MAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKSTNMKDKAAAA 498
+ L +Y ++++ + + + VK ++ KAAAA
Sbjct: 400 FGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKY--IRRKAAAA 454
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 168/442 (38%), Gaps = 55/442 (12%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 12 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 66
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 67 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 126
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 127 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 180
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 181 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 239
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 240 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 286
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI 381
+ L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 287 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV 342
Query: 382 EGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMH 441
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 343 GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQK 399
Query: 442 MAKAMMLVFLHRLITTYKWEMI 463
+ L +Y ++++
Sbjct: 400 FGLLQVKTILATAFRSYDFQLL 421
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 168/442 (38%), Gaps = 55/442 (12%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 25 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 79
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 80 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 139
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 140 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 193
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 194 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 252
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 253 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 299
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI 381
+ L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 300 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV 355
Query: 382 EGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMH 441
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 356 GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQK 412
Query: 442 MAKAMMLVFLHRLITTYKWEMI 463
+ L +Y ++++
Sbjct: 413 FGLLQVKTILATAFRSYDFQLL 434
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 168/442 (38%), Gaps = 55/442 (12%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 13 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 67
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 68 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 127
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 128 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 181
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 182 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 240
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 241 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 287
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI 381
+ L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 288 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV 343
Query: 382 EGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMH 441
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 344 GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQK 400
Query: 442 MAKAMMLVFLHRLITTYKWEMI 463
+ L +Y ++++
Sbjct: 401 FGLLQVKTILATAFRSYDFQLL 422
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 165/441 (37%), Gaps = 53/441 (12%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 25 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 79
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 80 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 139
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLA--FPL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 140 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 193
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGL----ETHEDFLQCLLA 264
+P F R +AR + + L ++I R+ + D L LL+
Sbjct: 194 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLS 253
Query: 265 EDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEE 322
AV +D TP L E+ I+ + AGQ T++ TW + +L N +
Sbjct: 254 --AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVK 300
Query: 323 VLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIE 382
L+ L+ E +E L ++ MP+A + +ES+R + R V+ D ++
Sbjct: 301 HLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVG 356
Query: 383 GYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHM 442
YV+ G + H D P +++P R DE I F G C+G
Sbjct: 357 SYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKF 413
Query: 443 AKAMMLVFLHRLITTYKWEMI 463
+ L +Y ++++
Sbjct: 414 GLLQVKTILATAFRSYDFQLL 434
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFP----LMERTKK 340
+L+ E I+ N + + DTTA + + L+ N +V L+ E + E +K
Sbjct: 272 ELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQK 331
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
+ +P +KE+LR+ + + R+V D ++ Y I AG V + S+
Sbjct: 332 AT------TELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLG 385
Query: 401 LDSTVHSNPYKFNPSRFDG--DESKPYGSIPFSMGGRACLG 439
++ + P ++NP R+ + + +PF G R CLG
Sbjct: 386 RNAALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ L DEE + +++AG TT + +V+ L E+ D
Sbjct: 244 RALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDA----------------- 286
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
ED R+P +V+E LR R E+ G I A VN S + DS
Sbjct: 287 AAEDPGRIP---AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDS 343
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
H +P +F+PSR G ++ + F G CLG +A+ V L +I + +
Sbjct: 344 DAHDDPDRFDPSRKSGGAAQ----LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTV 399
Query: 464 DSD 466
D D
Sbjct: 400 DRD 402
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ L DEE + +++AG TT + +V+ L E+ D
Sbjct: 224 RALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDA----------------- 266
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
ED R+P +V+E LR R E+ G I A VN S + DS
Sbjct: 267 AAEDPGRIP---AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDS 323
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
H +P +F+PSR G ++ + F G CLG +A+ V L +I + +
Sbjct: 324 DAHDDPDRFDPSRKSGGAAQ----LSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTV 379
Query: 464 DSD 466
D D
Sbjct: 380 DRD 382
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 144/365 (39%), Gaps = 36/365 (9%)
Query: 119 IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLR 178
I G+ V AS +R K + A + + V ++DW +A + +L
Sbjct: 82 IFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIADWG-EAGEIDLLD 138
Query: 179 EALKVTFKAMCKILLSLESGKELE----MLENDVTRVYDAMLAFPLKLPWTKFYRGVKAR 234
++T L+ + +L+ L +++ R D + LP F R +AR
Sbjct: 139 FFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEAR 198
Query: 235 KRIMRTLEKMINIRRKGLETHE---DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEI 291
++ + ++N R T + D L L+A A TP+ + +EI
Sbjct: 199 NGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKA-----------ETGTPR-FSADEI 246
Query: 292 QDNILTMIIAGQDTTASAITW----MVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLED 347
++M+ AG T++ +W ++++ V+D+L + ++
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY------GDGRSVSFHA 300
Query: 348 LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHS 407
L ++P V+KE+LR+ + R+ + E++G+ I G V +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 408 NPYKFNPSRFDGDESKP----YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
+P+ F P+R++ + + IPF G C+G A + L+ Y++EM
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 464 DSDSS 468
S
Sbjct: 421 QPPES 425
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 49/310 (15%)
Query: 166 DWEHKAATVVVLRE---ALKVTFKA-MCKILLSLESGKELEMLENDVTRVYDAMLAFPLK 221
D + KA + +V AL+ T + + K L L G+E + ++ + MLA
Sbjct: 120 DEQRKAVSPIVAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLATLFD 179
Query: 222 LPWTKFYRGVKARKRIMRTLEKMINIRRKGL-----ETHEDFLQC-----LLAEDAVDKD 271
P+ + R+++ R + G+ + + L+C +L + V+KD
Sbjct: 180 FPF-------EERRKLTRWSDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNKD 232
Query: 272 RAXXXXXX-XETP--KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLK 328
+P + +T EE N+L +I+ G DTT +++T V L +N + KLK
Sbjct: 233 PGNDLISMLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLK 292
Query: 329 AEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKA 388
A P + T +V E +R + +A R I D E+ G I+
Sbjct: 293 AN--PALVET------------------MVPEIIRWQTPLAHMRRTAIADSELGGKTIRK 332
Query: 389 GWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMML 448
G V + S + D V P +F D +P + F G C+G +A+ +
Sbjct: 333 GDKVVMWYYSGNRDDEVIDRPEEFII-----DRPRPRQHLSFGFGIHRCVGNRLAEMQLR 387
Query: 449 VFLHRLITTY 458
+ ++T +
Sbjct: 388 ILWEEILTRF 397
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 149/368 (40%), Gaps = 42/368 (11%)
Query: 119 IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLR 178
I G+ V AS +R K + A + + V ++DW +A + +L
Sbjct: 82 IFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIADWG-EAGEIDLLD 138
Query: 179 EALKVTFKAMCKILLSLESGKELE----MLENDVTRVYDAMLAFPLKLPWTKFYRGVKAR 234
++T L+ + +L+ L +++ R D + LP F R +AR
Sbjct: 139 FFAELTIYTSSATLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEAR 198
Query: 235 KRIMRTLEKMINIRRKGLETHE---DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEI 291
++ + ++N R T + D L L+A A TP+ + +EI
Sbjct: 199 NGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKA-----------ETGTPR-FSADEI 246
Query: 292 QDNILTMIIAGQDTTASAITW----MVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLED 347
++M+ AG T++ +W ++++ V+D+L + ++
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY------GDGRSVSFHA 300
Query: 348 LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV-- 405
L ++P V+KE+LR+ + R+ + E++G+ I G ++ A S + + +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEG---DLVAASPAISNRIPE 357
Query: 406 -HSNPYKFNPSRFDGDESKP----YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKW 460
+P+ F P+R++ + + IPF G C+G A + L+ Y++
Sbjct: 358 DFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
Query: 461 EMIDSDSS 468
EM S
Sbjct: 418 EMAQPPES 425
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 144/365 (39%), Gaps = 36/365 (9%)
Query: 119 IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLR 178
I G+ V AS +R K + A + + V ++DW +A + +L
Sbjct: 82 IFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIADWG-EAGEIDLLD 138
Query: 179 EALKVTFKAMCKILLSLESGKELE----MLENDVTRVYDAMLAFPLKLPWTKFYRGVKAR 234
++T L+ + +L+ L +++ R D + LP F R +AR
Sbjct: 139 FFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEAR 198
Query: 235 KRIMRTLEKMINIRRKGLETHE---DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEI 291
++ + ++N R T + D L L+A A TP+ + +EI
Sbjct: 199 NGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKA-----------ETGTPR-FSADEI 246
Query: 292 QDNILTMIIAGQDTTASAITW----MVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLED 347
++M+ AG T++ +W ++++ V+D+L + ++
Sbjct: 247 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY------GDGRSVSFHA 300
Query: 348 LNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHS 407
L ++P V+KE+LR+ + R+ + E++G+ I G V +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 408 NPYKFNPSRFDGDESKP----YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI 463
+P+ F P+R++ + + IPF G C+G A + L+ Y++EM
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 464 DSDSS 468
S
Sbjct: 421 QPPES 425
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 353 YASKVVKESLRMASIVAWYPRLVI---HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
YA V+E R ++P +V D E EG G V +D + D+ ++P
Sbjct: 265 YAELFVQEVRRF---YPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
+F P RF + + IP G G C G + A+M V H L+ ++++ D
Sbjct: 322 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 381
Query: 466 DSSIDKWAMFARLKS 480
D SID FARL +
Sbjct: 382 DLSID----FARLPA 392
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 353 YASKVVKESLRMASIVAWYPRLVI---HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
YA V+E R ++P +V D E EG G V +D + D+ ++P
Sbjct: 265 YAELFVQEVRRF---YPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
+F P RF + + IP G G C G + A+M V H L+ ++++ D
Sbjct: 322 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 381
Query: 466 DSSIDKWAMFARLKS 480
D SID FARL +
Sbjct: 382 DLSID----FARLPA 392
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 353 YASKVVKESLRMASIVAWYPRLVI---HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
YA V+E R ++P +V D E EG G V +D + D+ ++P
Sbjct: 273 YAELFVQEVRRF---YPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 329
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
+F P RF + + IP G G C G + A+M V H L+ ++++ D
Sbjct: 330 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 389
Query: 466 DSSIDKWAMFARLKS 480
D SID FARL +
Sbjct: 390 DLSID----FARLPA 400
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 353 YASKVVKESLRMASIVAWYPRLVI---HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
YA V+E R ++P +V D E EG G V +D + D+ ++P
Sbjct: 265 YAELFVQEVRRF---YPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
+F P RF + + IP G G C G + A+M V H L+ ++++ D
Sbjct: 322 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 381
Query: 466 DSSIDKWAMFARLKS 480
D SID FARL +
Sbjct: 382 DLSID----FARLPA 392
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 35/279 (12%)
Query: 204 LENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE---DFLQ 260
L +++ R D + LP F R +AR ++ + ++N R T + D L
Sbjct: 168 LYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLD 227
Query: 261 CLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW----MVKY 316
L+A A TP+ + +EI ++M+ AG T++ +W ++++
Sbjct: 228 VLIAVKA-----------ETGTPR-FSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 317 LSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVI 376
V+D+L + ++ L ++P V+KE+LR+ + R+
Sbjct: 276 RDAYAAVIDELDELY------GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAK 329
Query: 377 HDCEIEGYVIKAGWSVNIDAKSIHLDSTV---HSNPYKFNPSRFDGDESKP----YGSIP 429
+ E++G+ I G ++ A S + + + +P+ F P+R++ + + IP
Sbjct: 330 GEFEVQGHRIHEG---DLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP 386
Query: 430 FSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSS 468
F G C+G A + L+ Y++EM S
Sbjct: 387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPES 425
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 353 YASKVVKESLRMASIVAWYPRLVI---HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
YA V+E R ++P +V D E EG G V +D + D+ ++P
Sbjct: 273 YAELFVQEVRRF---YPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 329
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDS 465
+F P RF + + IP G G C G + A+M V H L+ ++++ D
Sbjct: 330 QEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 389
Query: 466 DSSIDKWAMFARLKS 480
D SID FARL +
Sbjct: 390 DLSID----FARLPA 400
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 255 HEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMV 314
H D L L E VD +R L+ EI + +++AG +TT +AIT V
Sbjct: 241 HHDDLTSSLVEAEVDGER-------------LSSREIASFFILLVVAGNETTRNAITHGV 287
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRL 374
LS E D+ ++ L A V+E +R AS V + R
Sbjct: 288 LALSRYPEQRDRWWSDFDGL-------------------APTAVEEIVRWASPVVYMRRT 328
Query: 375 VIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGG 434
+ D E+ G + AG V++ S + D + ++P+ F+ +R P + F GG
Sbjct: 329 LTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR------NPNPHLGFGGGG 382
Query: 435 -RACLGMHMAKAMMLVFLHRL 454
CLG ++A+ + V L
Sbjct: 383 AHFCLGANLARREIRVAFDEL 403
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 235 KRIMRT--LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQ 292
+RI R L + + R +L LLA D D + +TDEE++
Sbjct: 177 RRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELK 236
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMP 352
+I+ G +T A I + V L +N ++ L E +K
Sbjct: 237 GLCTALILGGVETVAGMIGFGVLALLDNPGQIEL-------LFESPEK------------ 277
Query: 353 YASKVVKESLR-MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
A +VV E +R ++ + A PRL I D I+G +IKAG V + D + +P
Sbjct: 278 -AERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDV 336
Query: 412 FNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMM 447
+ +R + F G C+G +A++M+
Sbjct: 337 LDANR------AAVSDVGFGHGIHYCVGAALARSML 366
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Query: 353 YASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF 412
YA V+E R D E EG G V +D + D+ ++P +F
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 413 NPSRFDGDESKPYGSIPFSMG----GRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSS 468
P RF + + IP G G C G + A+M V H L+ ++++ D D S
Sbjct: 333 RPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLS 392
Query: 469 IDKWAMFARLKS 480
ID FARL +
Sbjct: 393 ID----FARLPA 400
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
KLT+EE + + IAG +TT + I+ V L ++ E L KL R L+
Sbjct: 218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKL---------RENPDLI- 267
Query: 345 LEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
V+E LR S R+ D +I G I+ G V + + + D +
Sbjct: 268 ----------GTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPS 317
Query: 405 VHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
+ +NP F+ +R P + F G CLG +A+
Sbjct: 318 IFTNPDVFDITR------SPNPHLSFGHGHHVCLGSSLAR 351
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L +E+ L +++AG +TT +AI L ++ E +D L
Sbjct: 228 LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLL----------------- 270
Query: 346 EDLNRMPYA-SKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
R P A S VV+E LR S+ R+ D E+ G IKAG +V + ++ D+
Sbjct: 271 ----RDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAK 326
Query: 405 VHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFL 451
+ NP F+ R + F G CLG ++A+A + + L
Sbjct: 327 AYENPDIFDARR------NARHHVGFGHGIHQCLGQNLARAELEIAL 367
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDL 348
EE+ + ++IAG +TTAS + V L ++ E L+A D
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-----------------DR 274
Query: 349 NRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSN 408
+ +P A + + L +A I R+ D E+EG +I+AG V + + D TV+ +
Sbjct: 275 SLVPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYED 332
Query: 409 PYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
P + R + F G CLG ++A+ + V L+ L+
Sbjct: 333 PDALDIHR------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDL 348
EE+ + ++IAG +TTAS + V L ++ E L+A D
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-----------------DR 274
Query: 349 NRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSN 408
+ +P A + + L +A I R+ D E+EG +I+AG V + + D TV+ +
Sbjct: 275 SLVPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYED 332
Query: 409 PYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
P + R + F G CLG ++A+ + V L+ L+
Sbjct: 333 PDALDIHR------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDL 348
EE+ + ++IAG +TTAS + V L ++ E L+A D
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-----------------DR 274
Query: 349 NRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSN 408
+ +P A + + L +A I R+ D E+EG +I+AG V + + D TV+ +
Sbjct: 275 SLVPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYED 332
Query: 409 PYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
P + R + F G CLG ++A+ + V L+ L+
Sbjct: 333 PDALDIHR------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
++L+D+E+ L ++I G +TT ++ + L N + D L+
Sbjct: 213 ERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQ--------------- 257
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
D + +P A ++E LR + V R++ D E G + AG + + +S + D
Sbjct: 258 --RDPSLLPGA---IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDE 312
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
V P KF+ R P + F G CLG +A+ + + R++
Sbjct: 313 AVFCEPEKFDVQR------NPNSHLAFGFGTHFCLGNQLARLELSLMTERVL 358
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDL 348
EE+ + ++IAG +TTAS + V L ++ E L+A D
Sbjct: 232 EELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-----------------DR 274
Query: 349 NRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSN 408
+ +P A + + L +A I R+ D E+EG +I+AG V + + D TV+ +
Sbjct: 275 SLVPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYED 332
Query: 409 PYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
P + R + F G CLG ++A+ + V L+ L+
Sbjct: 333 PDALDIHR------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 30/169 (17%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+KL+D+E ++ + +AG +TT ++IT + ++N + + K E
Sbjct: 234 EKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWELYKKER------------ 281
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
E +R A+ V+ + R + D E+ G IK G V + +S + D
Sbjct: 282 ----------PETAADEIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDE 331
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAKAMM-LVF 450
V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 332 EVFEDPHTFNILR------SPNPHVGFGGTGAHYCIGANLARMTINLIF 374
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 31/186 (16%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+KLT +E I+ +II G +TT + I M++ + EN +++D
Sbjct: 171 RKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIID------------------ 212
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYP-RLVIHDCEIEGYVIKAGWSVNIDAKSIHLD 402
+ + S V+E+LR S + + P R D I IK G V + S + D
Sbjct: 213 -----DALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRD 267
Query: 403 STVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEM 462
T P F R + + F +G CLG +A+ + L+ ++ +K
Sbjct: 268 ETFFDEPDLFKIGRRE-------MHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIK 320
Query: 463 IDSDSS 468
ID S
Sbjct: 321 IDYKKS 326
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
++++D+EI L ++I G +TT ++ + L + + D L A
Sbjct: 216 QRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVA-------------- 261
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
D++ +P A ++E LR S V R + D G ++AG + + +S + D
Sbjct: 262 ---DVDLLPGA---IEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDE 315
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+V +P F R P + F G CLG +A+ + + R++
Sbjct: 316 SVFGDPDNFRIDR------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVL 361
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ ++D + + AG DTT+++ L+ + ++ ++KA
Sbjct: 272 EPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKA-------------- 317
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
D N +P +V+E++R + V + R D E+ G I AG + ++ + + D
Sbjct: 318 ---DRNLLP---GIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDP 371
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
P KF+P+R + F G CLG+H+A+ M V L L+
Sbjct: 372 AQFPEPRKFDPTR------PANRHLAFGAGSHQCLGLHLARLEMRVLLDVLL 417
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENE---EVLDKLKAEHFPLMERTKK 340
+KL+D+E ++ + +AG +TT ++IT + +E+ E+ K++ E
Sbjct: 242 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPE---------- 291
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
E +R A+ V + R + D E+ G IK G V + +S +
Sbjct: 292 ---------------TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 336
Query: 401 LDSTVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAK-AMMLVF 450
D V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 337 FDEEVFQDPFTFNILR------NPNPHVGFGGTGAHYCIGANLARMTINLIF 382
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENE---EVLDKLKAEHFPLMERTKK 340
+KL+D+E ++ + +AG +TT ++IT + +E+ E+ K++ E
Sbjct: 241 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPE---------- 290
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
E +R A+ V + R + D E+ G IK G V + +S +
Sbjct: 291 ---------------TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 335
Query: 401 LDSTVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAK-AMMLVF 450
D V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 336 FDEEVFQDPFTFNILR------NPNPHVGFGGTGAHYCIGANLARMTINLIF 381
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENE---EVLDKLKAEHFPLMERTKK 340
+KL+D+E ++ + +AG +TT ++IT + +E+ E+ K++ E
Sbjct: 251 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPE---------- 300
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
E +R A+ V + R + D E+ G IK G V + +S +
Sbjct: 301 ---------------TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 345
Query: 401 LDSTVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAK-AMMLVF 450
D V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 346 FDEEVFQDPFTFNILR------NPNPHVGFGGTGAHYCIGANLARMTINLIF 391
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENE---EVLDKLKAEHFPLMERTKK 340
+KL+D+E ++ + +AG +TT ++IT + +E+ E+ K++ E
Sbjct: 249 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPE---------- 298
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
E +R A+ V + R + D E+ G IK G V + +S +
Sbjct: 299 ---------------TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 343
Query: 401 LDSTVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAK-AMMLVF 450
D V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 344 FDEEVFQDPFTFNILR------NPNPHVGFGGTGAHYCIGANLARMTINLIF 389
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENE---EVLDKLKAEHFPLMERTKK 340
+KL+D+E ++ + +AG +TT ++IT + +E+ E+ K++ E
Sbjct: 258 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPE---------- 307
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIH 400
E +R A+ V + R + D E+ G IK G V + +S +
Sbjct: 308 ---------------TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 352
Query: 401 LDSTVHSNPYKFNPSRFDGDESKPYGSIPF-SMGGRACLGMHMAK-AMMLVF 450
D V +P+ FN R P + F G C+G ++A+ + L+F
Sbjct: 353 FDEEVFQDPFTFNILR------NPNPHVGFGGTGAHYCIGANLARMTINLIF 398
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 25/211 (11%)
Query: 281 ETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKK 340
+T D E L ++ A Q T A W + + N E + E +E +
Sbjct: 248 DTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQ 307
Query: 341 SL--------LTLEDLNRMPYASKVVKESLRMAS----IVAWYPRLVIHDCEIEGYVIKA 388
+ L+ +LN +P ++KESLR++S I +H E Y I+
Sbjct: 308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLH-LEDGSYNIRK 366
Query: 389 GWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESK------------PYGSIPFSMGGRA 436
+ + + +HLD ++ +P F R+ + K Y +PF G
Sbjct: 367 DDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI 426
Query: 437 CLGMHMAKAMMLVFLHRLITTYKWEMIDSDS 467
C G A + FL +++ ++ E+I+ +
Sbjct: 427 CPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 25/211 (11%)
Query: 281 ETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKK 340
+T D E L ++ A Q T A W + + N E + E +E +
Sbjct: 248 DTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQ 307
Query: 341 SL--------LTLEDLNRMPYASKVVKESLRMAS----IVAWYPRLVIHDCEIEGYVIKA 388
+ L+ +LN +P ++KESLR++S I +H E Y I+
Sbjct: 308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLH-LEDGSYNIRK 366
Query: 389 GWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESK------------PYGSIPFSMGGRA 436
+ + + +HLD ++ +P F R+ + K Y +PF G
Sbjct: 367 DDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI 426
Query: 437 CLGMHMAKAMMLVFLHRLITTYKWEMIDSDS 467
C G A + FL +++ ++ E+I+ +
Sbjct: 427 CPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 29/175 (16%)
Query: 283 PKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSL 342
P +T E++ + I AG++TT S I L + E+ +L+
Sbjct: 231 PGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELR-------------- 276
Query: 343 LTLEDLNRMPYASKVVKESLRMASIVAWYP-RLVIHDCEIEGYVIKAGWSVNIDAKSIHL 401
+D + MP A V E LR+ S+ P R+ D E+ G + A D I L
Sbjct: 277 ---KDPDLMPAA---VDELLRVLSVADSIPLRVAAEDIELSGRTVPA------DDGVIAL 324
Query: 402 DSTVHSNPYKF-NPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+ + +P +F +P R D + + + F G C+G H+A+ + V L L+
Sbjct: 325 LAGANHDPEQFDDPERVDFHRTDNH-HVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 39/214 (18%)
Query: 284 KKLTDEEI-----QDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE-----HFP 333
K+L DE I + +L + Q A W++ YL + E L ++ E H
Sbjct: 242 KQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLR 301
Query: 334 LMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI-----EGYVIKA 388
L ER K + P V+ E+LR+ + A R V D +I + Y ++
Sbjct: 302 LEERQKNT----------PVFDSVLWETLRLTA-AALITRDVTQDKKICLSNGQEYHLRR 350
Query: 389 GWSVNI-DAKSIHLDSTVHSNPYKFNPSRF---DGDESK---------PYGSIPFSMGGR 435
G + + S +D +H P F RF D E K Y S+P+
Sbjct: 351 GDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDN 410
Query: 436 ACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSI 469
C G H A + + ++T + E+ D ++++
Sbjct: 411 LCPGRHFAVHAIKELVFTILTRFDVELCDKNATV 444
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 82/223 (36%), Gaps = 46/223 (20%)
Query: 232 KARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEI 291
+A I+ +++I RRK E +D + L+ +D LT +++
Sbjct: 205 QAHTEILVYFDELITARRK--EPGDDLVSTLVTDD------------------DLTIDDV 244
Query: 292 QDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRM 351
N ++I G +TT AIT V L+ +L L+ +
Sbjct: 245 LLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALR--------------------DGS 284
Query: 352 PYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
VV+E LR S R+ D I G + +G V + + D +P
Sbjct: 285 ADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 412 FNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRL 454
F P R KP I F G CLG +A+ + V L L
Sbjct: 345 FLPGR------KPNRHITFGHGMHHCLGSALARIELSVVLRVL 381
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+L+ +E+ + +I AG DTT I + V L + E L+ +KAE LM +L
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-LMRNALDEVLR 296
Query: 345 LEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
E++ LR+ ++ R D E G IK G V + S D T
Sbjct: 297 FENI-------------LRIGTV-----RFARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 405 VHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
V S P F+ R D S YG G C G+ +A+
Sbjct: 339 VFSRPDVFDVRR-DTSASLAYGR-----GPHVCPGVSLAR 372
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
K + D+ + +++ G DT + + +M+ YLS + E + +++ E L
Sbjct: 239 KPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKL--------- 289
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+ V+E R ++V+ R V+ D E G ++K G + + LD
Sbjct: 290 -----------QRGVEELFRRFAVVS-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDD 337
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLH 452
H +P + SR D S F+ G C GMH+A+ + V L
Sbjct: 338 RHHDDPMTVDLSRRDVTHST------FAQGPHRCAGMHLARLEVTVMLQ 380
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 247 IRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTT 306
+ RK E + L LLA +D DR L+ EE+ + ++IAG +TT
Sbjct: 195 LERKRTEPDDALLSSLLAVSDMDGDR-------------LSQEELVAMAMLLLIAGHETT 241
Query: 307 ASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMAS 366
+ I V L L ++ LL ED + + S V+E LR S
Sbjct: 242 VNLIGNGVLAL----------------LTHPDQRKLLA-EDPSLI---SSAVEEFLRFDS 281
Query: 367 IVAWYP-RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPY 425
V+ P R D G I AG V + + + D+ P + + +R D S
Sbjct: 282 PVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR---DAS--- 335
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRL 454
G + F G CLG +A+ V + RL
Sbjct: 336 GGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+L+ +E+ + +I AG DTT I + V L + E L+ +KAE LM +L
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-LMRNALDEVLR 296
Query: 345 LEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDST 404
+++ LR+ ++ R D E G IK G V + S D T
Sbjct: 297 FDNI-------------LRIGTV-----RFARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 405 VHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
V S P F+ R D S S+ + G C G+ +A+
Sbjct: 339 VFSRPDVFDVRR---DTS---ASLAYGRGPHVCPGVSLAR 372
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P AS+ E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAASE---ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 247 IRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTT 306
+ RK E + L LLA D DR L+ EE+ + ++IAG +TT
Sbjct: 195 LERKRTEPDDALLSSLLAVSDEDGDR-------------LSQEELVAMAMLLLIAGHETT 241
Query: 307 ASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMAS 366
+ I V L L ++ LL ED + + S V+E LR S
Sbjct: 242 VNLIGNGVLAL----------------LTHPDQRKLLA-EDPSLI---SSAVEEFLRFDS 281
Query: 367 IVAWYP-RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPY 425
V+ P R D G I AG V + + + D+ P + + +R D S
Sbjct: 282 PVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR---DAS--- 335
Query: 426 GSIPFSMGGRACLGMHMAKAMMLVFLHRL 454
G + F G CLG +A+ V + RL
Sbjct: 336 GGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVALG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 10/171 (5%)
Query: 291 IQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR 350
+ D++L AG+ T + AI ++ + + + L A L R + N
Sbjct: 203 LADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFR--ND 260
Query: 351 MPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPY 410
+ ++ E +RM + R D EI G +I+AG + + + D V +P
Sbjct: 261 ESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPD 320
Query: 411 KFNPSRFDGDESKPYGS--IPFSMGGRACLGMHMAKAMMLVFLHRLITTYK 459
F+ +R P S + F +G +C G +++A L Y+
Sbjct: 321 VFDHTR------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 10/171 (5%)
Query: 291 IQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR 350
+ D++L AG+ T + AI ++ + + + L A L R + N
Sbjct: 205 LADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFR--ND 262
Query: 351 MPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPY 410
+ ++ E +RM + R D EI G +I+AG + + + D V +P
Sbjct: 263 ESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPD 322
Query: 411 KFNPSRFDGDESKPYGS--IPFSMGGRACLGMHMAKAMMLVFLHRLITTYK 459
F+ +R P S + F +G +C G +++A L Y+
Sbjct: 323 VFDHTR------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVAAG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSR 416
V+E R + VA R D I +++A + +S + D V NP +FN +R
Sbjct: 275 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 417 FDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
+ P + F G C+ H+AKA + L +
Sbjct: 335 ----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-NGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 275
Query: 358 VKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSR 416
V+E R + VA R D I +++A + +S + D V NP +FN +R
Sbjct: 276 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 417 FDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
+ P + F G C+ H+AKA + L +
Sbjct: 336 ----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 46/207 (22%)
Query: 241 LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMII 300
L ++I+ +R + ED L L+ D R LT EE+ +++
Sbjct: 218 LSRLIDSKRG--QDGEDLLSALVRTSDEDGSR-------------LTSEELLGMAHILLV 262
Query: 301 AGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKE 360
AG +TT + I + L + + L L+A+ +TL D V+E
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRAD------------MTLLD--------GAVEE 302
Query: 361 SLRMASIV--AWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF-NPSRF 417
LR V A Y R + +++G VI AG +V + + + H P +F +P RF
Sbjct: 303 MLRYEGPVESATY-RFPVEPVDLDGTVIPAGDTVLV------VLADAHRTPERFPDPHRF 355
Query: 418 DGDESKPYGSIPFSMGGRACLGMHMAK 444
D G + F G C+G +A+
Sbjct: 356 DIRRDT-AGHLAFGHGIHFCIGAPLAR 381
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 46/207 (22%)
Query: 241 LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMII 300
L ++I+ +R + ED L L+ D R LT EE+ +++
Sbjct: 218 LSRLIDSKRG--QDGEDLLSALVRTSDEDGSR-------------LTSEELLGMAHILLV 262
Query: 301 AGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKE 360
AG +TT + I + L + + L L+A+ +TL D V+E
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRAD------------MTLLD--------GAVEE 302
Query: 361 SLRMASIV--AWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF-NPSRF 417
LR V A Y R + +++G VI AG +V + + + H P +F +P RF
Sbjct: 303 MLRYEGPVESATY-RFPVEPVDLDGTVIPAGDTVLV------VLADAHRTPERFPDPHRF 355
Query: 418 DGDESKPYGSIPFSMGGRACLGMHMAK 444
D G + F G C+G +A+
Sbjct: 356 DIRRDT-AGHLAFGHGIHFCIGAPLAR 381
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 46/207 (22%)
Query: 241 LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMII 300
L ++I+ +R + ED L L+ D R LT EE+ +++
Sbjct: 218 LSRLIDSKRG--QDGEDLLSALVRTSDEDGSR-------------LTSEELLGMAHILLV 262
Query: 301 AGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKE 360
AG +TT + I + L + + L L+A+ +TL D V+E
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRAD------------MTLLD--------GAVEE 302
Query: 361 SLRMASIV--AWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF-NPSRF 417
LR V A Y R + +++G VI AG +V + + + H P +F +P RF
Sbjct: 303 MLRYEGPVESATY-RFPVEPVDLDGTVIPAGDTVLV------VLADAHRTPERFPDPHRF 355
Query: 418 DGDESKPYGSIPFSMGGRACLGMHMAK 444
D G + F G C+G +A+
Sbjct: 356 DIRRDT-AGHLAFGHGIHFCIGAPLAR 381
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 30/206 (14%)
Query: 257 DFLQCLLAED--AVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMV 314
D+L+ L+ E +D E+ +LT++EI ++IAG +TT + I
Sbjct: 210 DYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHETTVNLI---- 265
Query: 315 KYLSENEEVLDKLKAEHFPLMERTKKSLLTLE-DLNRMPYASKVVKESLRMASIVAWYPR 373
A M RT L D +R AS V++E++R V R
Sbjct: 266 --------------ANAALAMLRTPGQWAALAADGSR---ASAVIEETMRYDPPVQLVSR 308
Query: 374 LVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMG 433
D I + + G ++ + + H D T+ P +F+P R + F G
Sbjct: 309 YAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQ------IRHLGFGKG 362
Query: 434 GRACLGMHMAKAMMLVFLHRLITTYK 459
CLG +A+ V L L +
Sbjct: 363 AHFCLGAPLARLEATVALPALAARFP 388
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 222 RPITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 265
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 266 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 320
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 321 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 222 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 265
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 266 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 320
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 321 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 222 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 265
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 266 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 320
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 321 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVTGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 44/214 (20%)
Query: 244 MINIRRKGLETHEDFLQCLL-AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAG 302
+I+ RRK E +D + L+ A D D L+++E+ D + +++AG
Sbjct: 213 LIDRRRK--EPTDDLVSALVQARDQQDS---------------LSEQELLDLAIGLLVAG 255
Query: 303 QDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR-MPYASKVVKES 361
++T + I V L E+ +L ++R + +E+L R +P
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQL-------LDRPELIPSAVEELTRWVPLG------- 301
Query: 362 LRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDE 421
+ +PR + D + G I+AG V + + D + R D D
Sbjct: 302 -----VGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFP-----DADRIDVDR 351
Query: 422 SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+ P + F G CLG +A+ + V L L+
Sbjct: 352 T-PNQHLGFGHGVHHCLGAPLARVELQVALEVLL 384
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 304 DTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLR 363
DT + +++ + +L+ + E++ +L+++ LM + E R P S+
Sbjct: 293 DTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAE------EMFRRFPVVSEA------ 340
Query: 364 MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESK 423
R+V D E +G +K G + + LD + P+K + SR S
Sbjct: 341 ---------RMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRRSISHST 391
Query: 424 PYGSIPFSMGGRACLGMHMAKAMMLVFL 451
F G C GMH+A+ ++V L
Sbjct: 392 ------FGGGPHRCAGMHLARMEVIVTL 413
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVVGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 304 DTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLR 363
DT + +++ + +L+ + E++ +L+++ LM + E R P S+
Sbjct: 258 DTVVNFLSFFMIHLARHPELVAELRSDPLKLMRGAE------EMFRRFPVVSEA------ 305
Query: 364 MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESK 423
R+V D E +G +K G + + LD + P+K + SR S
Sbjct: 306 ---------RMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRRSISHST 356
Query: 424 PYGSIPFSMGGRACLGMHMAKAMMLVFL 451
F G C GMH+A+ ++V L
Sbjct: 357 ------FGGGPHRCAGMHLARMEVIVTL 378
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 62/177 (35%), Gaps = 59/177 (33%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSEN------------------EEVLDKL 327
L E +T+++AG +T ASA+TW LS +E L +L
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEAL-RL 264
Query: 328 KAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIK 387
+ L R ++ LL ED R+P + +V + YV +
Sbjct: 265 YPPAWILTRRLERPLLLGED--RLPQGTTLV----------------------LSPYVTQ 300
Query: 388 AGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGS-IPFSMGGRACLGMHMA 443
+ +A F P RF + P G PF +G R CLG A
Sbjct: 301 RLYFPEGEA---------------FQPERFLAERGTPSGRYFPFGLGQRLCLGRDFA 342
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 222 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 265
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
++ R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 266 -IQRPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 320
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 321 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARLQIIVTLKEWLT 367
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 275
Query: 358 VKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSR 416
V+E R + A R D I +++A + +S + D V NP +FN +R
Sbjct: 276 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 417 FDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
+ P + F G C+ H+AKA + L +
Sbjct: 336 ----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 127/335 (37%), Gaps = 71/335 (21%)
Query: 118 EIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATV-VV 176
E+VG +++ H +R +L F+L + +Q+V + L + E + ++
Sbjct: 83 ELVG--NLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLI 140
Query: 177 LREALKVTFKAMCKILLSLESGKELEM------LENDVTRVYDAMLAFPLKLPWTKFYRG 230
A KV +C+++ +++ M L+ +++ A L
Sbjct: 141 AFVADKVPGAVLCELVGVPRDDRDMFMKLCHGHLDASLSQKRRAALG------------- 187
Query: 231 VKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEE 290
+ R L MI RK E E + ++AE D TDEE
Sbjct: 188 ----DKFSRYLLAMIARERK--EPGEGMIGAVVAEYGDDA----------------TDEE 225
Query: 291 IQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR 350
++ + +++AG D + I V + + E +D + + E++
Sbjct: 226 LRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD-----EQS------------ 268
Query: 351 MPYASKVVKESLRMASI-VAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
A + V E +R ++ + PR+ D + G IK G SV + + D + +
Sbjct: 269 ---AQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDV 325
Query: 410 YKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
+ + +R +P + F G CLG +A+
Sbjct: 326 DRLDVTR------EPIPHVAFGHGVHHCLGAALAR 354
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSR 416
V+E R + A R D I +++A + +S + D V NP +FN +R
Sbjct: 275 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 417 FDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
+ P + F G C+ H+AKA + L +
Sbjct: 335 ----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
++ R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IQRPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G +T + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 237 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 276
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 277 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 335
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 336 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G D + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENAAPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 275
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 276 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 335 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 275
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 276 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 335 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 28/174 (16%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+LT++ + + ++ AG D+ AS + V L+ + + +
Sbjct: 225 ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPD-----------------QRAAA 267
Query: 345 LEDLNRMPYASKVVKESLRMASIVA--WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLD 402
L D + M ++ V+E LR A PR D E G I+AG V D + D
Sbjct: 268 LADPDVM---ARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFD 324
Query: 403 STVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
+ P +F+ +R P + F G C+G +A+ + +L T
Sbjct: 325 ERAFTGPEEFDAAR------TPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFT 372
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 275 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 334 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG T + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 275 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 334 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G D + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDAVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G +T + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLNTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 330 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G D + +++ +++L+++ E +L
Sbjct: 232 RPITSDEAKRMCGLLLVGGLDIVVNFLSFSMEFLAKSPEHRQEL---------------- 275
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 276 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 330
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G CLG H+A+ ++V L +T
Sbjct: 331 RENACPMHVDFSR------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 44/214 (20%)
Query: 244 MINIRRKGLETHEDFLQCLL-AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAG 302
+I+ RRK E +D + L+ A D D L+++E+ D + +++AG
Sbjct: 213 LIDRRRK--EPTDDLVSALVQARDQQDS---------------LSEQELLDLAIGLLVAG 255
Query: 303 QDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR-MPYASKVVKES 361
++T + I V L E+ +L ++R + +E+L R +P
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQL-------LDRPELIPSAVEELTRWVPLG------- 301
Query: 362 LRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDE 421
+ PR + D + G I+AG V + + D + R D D
Sbjct: 302 -----VGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFP-----DADRIDVDR 351
Query: 422 SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+ P + F G CLG +A+ + V L L+
Sbjct: 352 T-PNQHLGFGHGVHHCLGAPLARVELQVALEVLL 384
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 44/214 (20%)
Query: 244 MINIRRKGLETHEDFLQCLL-AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAG 302
+I+ RRK E +D + L+ A D D L+++E+ D + +++AG
Sbjct: 213 LIDRRRK--EPTDDLVSALVQARDQQDS---------------LSEQELLDLAIGLLVAG 255
Query: 303 QDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR-MPYASKVVKES 361
++T + I V L E+ +L ++R + +E+L R +P
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQL-------LDRPELIPSAVEELTRWVPLGVGTAA-- 306
Query: 362 LRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDE 421
PR + D + G I+AG V + + D + R D D
Sbjct: 307 ----------PRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFP-----DADRIDVDR 351
Query: 422 SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLI 455
+ P + F G CLG +A+ + V L L+
Sbjct: 352 T-PNQHLGFGHGVHHCLGAPLARVELQVALEVLL 384
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLL 343
+ +T +E + +++ G DT + +++ +++L+++ E +L
Sbjct: 231 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL---------------- 274
Query: 344 TLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDS 403
+E R+P A +E LR S+VA R++ D E G +K G + + LD
Sbjct: 275 -IERPERIPAA---CEELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDE 329
Query: 404 TVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT 456
++ P + SR + F G C G H+A+ ++V L +T
Sbjct: 330 RENAAPMHVDFSR------QKVSHTTFGHGSHLCPGQHLARREIIVTLKEWLT 376
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L D E++ + T+++AG +TT + + +++ + K+K
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 270
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYP-------RLVIHDCEIEGYVIKAGWSVNIDAKS 398
A + V+E LR W P R+ D E+ G I G V + A
Sbjct: 271 ---ENPELAPQAVEEVLR------WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHV 321
Query: 399 IHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
H D V + + RFD + SI F G CLG +A+
Sbjct: 322 AHRDPRVFA-----DADRFDITVKREAPSIAFGGGPHFCLGTALAR 362
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 289 EEIQDNILTM-IIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSL----- 342
EE+Q L + + A Q A W++ +L +N E L ++ E ++ + ++ +
Sbjct: 260 EEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTT 319
Query: 343 LTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAK----- 397
L + L+ P V+ ESLR+ + + R V+ D + + G N+
Sbjct: 320 LPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMP---MADGREFNLRRGDRLLL 375
Query: 398 ----SIHLDSTVHSNPYKFNPSRF---DGDESKPYG---------SIPFSMGGRACLGMH 441
S D ++++P F +RF DG E K + ++P+ G CLG
Sbjct: 376 FPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRS 435
Query: 442 MAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAM 474
A + F+ ++ E+I++D I ++ +
Sbjct: 436 YAVNSIKQFVFLVLVHLDLELINADVEIPEFDL 468
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 281 ETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKK 340
E LTD EI + M+ AG +TT S I V LS + E ++
Sbjct: 222 ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPE----------------QR 265
Query: 341 SLLTLEDLNRMPYASKVVKESLRMASIVAWY-PRLVIHDCEIEGYVIKAGWSVNIDAKSI 399
+L+ L+ S VV+E+LR ++ + R D + VI AG ++ + ++
Sbjct: 266 ALV----LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGAL 321
Query: 400 HLDSTVHS-NPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVF 450
D H +F+ +R G+ +G P G A M A+ ++
Sbjct: 322 GRDERAHGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALY 373
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 289 EEIQDNILTM-IIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSL----- 342
EE+Q L + + A Q A W++ +L +N E L ++ E ++ + ++ +
Sbjct: 248 EEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTT 307
Query: 343 LTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAK----- 397
L + L+ P V+ ESLR+ + + R V+ D + + G N+
Sbjct: 308 LPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMP---MADGREFNLRRGDRLLL 363
Query: 398 ----SIHLDSTVHSNPYKFNPSRF---DGDESKPYG---------SIPFSMGGRACLGMH 441
S D ++++P F +RF DG E K + ++P+ G CLG
Sbjct: 364 FPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRS 423
Query: 442 MAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAM 474
A + F+ ++ E+I++D I ++ +
Sbjct: 424 YAVNSIKQFVFLVLVHLDLELINADVEIPEFDL 456
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 61/177 (34%), Gaps = 59/177 (33%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSEN------------------EEVLDKL 327
L E +T+++AG +T ASA+TW LS +E L +L
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEAL-RL 264
Query: 328 KAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIK 387
+ L R ++ LL ED R+P + +V + YV
Sbjct: 265 YPPAWILTRRLERPLLLGED--RLPPGTTLV----------------------LSPYVT- 299
Query: 388 AGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGS-IPFSMGGRACLGMHMA 443
+ +H F P RF + P G PF +G R CLG A
Sbjct: 300 ---------QRLHFPDG-----EAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFA 342
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L D E++ + T+++AG +TT + + +++ + K+K
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 280
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYP-------RLVIHDCEIEGYVIKAGWSVNIDAKS 398
A + V+E LR W P R+ D E+ G I G V + A
Sbjct: 281 ---ENPELAPQAVEEVLR------WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHV 331
Query: 399 IHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
H D V + + RFD + SI F G CLG +A+
Sbjct: 332 AHRDPRVFA-----DADRFDITVKREAPSIAFGGGPHFCLGTALAR 372
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L+D E I+ ++IAG +TT + I+ V+D + F L +R ++ L L
Sbjct: 194 LSDIEKLGYIILLLIAGNETTTNLIS---------NSVIDFTR---FNLWQRIREENLYL 241
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV 405
K ++E+LR + V R ++ I+ G V + S + D V
Sbjct: 242 ----------KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEV 291
Query: 406 HSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
+ KF P R P + F G CLG +A+
Sbjct: 292 FHDGEKFIPDR------NPNPHLSFGSGIHLCLGAPLAR 324
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L+D E I+ ++IAG +TT + I+ V+D + F L +R ++ L L
Sbjct: 194 LSDIEKLGYIILLLIAGNETTTNLIS---------NSVIDFTR---FNLWQRIREENLYL 241
Query: 346 EDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV 405
K ++E+LR + V R ++ I+ G V + S + D V
Sbjct: 242 ----------KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEV 291
Query: 406 HSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAK 444
+ KF P R P + F G CLG +A+
Sbjct: 292 FHDGEKFIPDR------NPNPHLSFGSGIHLCLGAPLAR 324
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 313 MVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYP 372
+V +LS + E L K L+ER + R+P A +E LR S+VA
Sbjct: 253 VVNFLSFSMEFLAKSPEHRQELIERPE----------RIPAA---CEELLRRFSLVA-DG 298
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R++ D E G +K G + + LD ++ P + SR + F
Sbjct: 299 RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSR------QKVSHTTFGH 352
Query: 433 GGRACLGMHMAKAMMLVFLHRLIT 456
G CLG H+A+ ++V L +T
Sbjct: 353 GSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNANMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 275 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 334 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNAAMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 275 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 334 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 27/163 (16%)
Query: 298 MIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKV 357
+++AG + I V L+++ + L +LKA SL A +
Sbjct: 235 LLVAGNAVMVNMIALGVATLAQHPDQLAQLKA---------NPSL-----------APQF 274
Query: 358 VKESLR--MASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPS 415
V+E R AS +A R D I +++A + +S + D V NP +FN +
Sbjct: 275 VEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTY 458
R + P + F G C+ H+AKA + L +
Sbjct: 334 R----KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 87/228 (38%), Gaps = 45/228 (19%)
Query: 236 RIMRTLEKMINIRRKGLETHEDFLQCLLA--EDAVDKDRAXXXXXXXETPKKLTDEEIQD 293
R+ L+++I +R +D L+A +D D DR L+ EE++D
Sbjct: 190 RLYEVLDQLIAAKRA--TPGDDMTSLLIAARDDEGDGDR-------------LSPEELRD 234
Query: 294 NILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
+L MI AG +TT + I V L + L +K +T D
Sbjct: 235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQL-----------ALVRKGEVTWAD------ 277
Query: 354 ASKVVKESLRMASIVAWYP-RLVIHDCEI-EGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
VV+E+LR V P R + D + +G I G + + + H +
Sbjct: 278 ---VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADT 334
Query: 412 FNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYK 459
F+ +R + + F G CLG +A+ + + L L +
Sbjct: 335 FDATRTVKEH------LAFGHGVHFCLGAPLARMEVTLALESLFGRFP 376
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 154/413 (37%), Gaps = 73/413 (17%)
Query: 65 YQFIQVRHLKYG-DCFRTNIFATTNVFFSSTGAAKIILNNE----GENFTKRYIKSVGEI 119
Y FI+ R +Y D F+ + + + AAK+ + + KR KS +
Sbjct: 22 YLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKS---L 78
Query: 120 VGDNSVL----CASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVV 175
G N++ A R L S + + T+++ V + WE KA VV
Sbjct: 79 FGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAV----TRWE-KADEVV 133
Query: 176 VLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARK 235
+ EA ++ + C E++ +D + DA A + ++G +AR
Sbjct: 134 LFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGAVG-----PRHWKGRRARP 188
Query: 236 RIMRTLEKMINIRRKGL--ETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQD 293
R +E MI R GL T L + D + E
Sbjct: 189 RAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELI---------- 238
Query: 294 NILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRM-- 351
N+L I+A + + + L E+ + + L++ + +++ + ++++ R
Sbjct: 239 NVLRPIVA----ISYFLVFSALALHEHPKYKEWLRSGN------SREREMFVQEVRRYYP 288
Query: 352 --PYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP 409
P+ +VK+ V ++CE K G SV +D + D + +P
Sbjct: 289 FGPFLGALVKKDF------------VWNNCEF-----KKGTSVLLDLYGTNHDPRLWDHP 331
Query: 410 YKFNPSRFDGDESKPYGSIPFSMG----GRACLG----MHMAKAMMLVFLHRL 454
+F P RF E + IP G G C G + + KA + +H++
Sbjct: 332 DEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQI 384
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 373 RLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSM 432
R+ + D EI+G I+AG +V + + + D V +P + + F E P + F
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---F---ERSPNPHVSFGF 348
Query: 433 GGRACLGMHMAK 444
G C G +A+
Sbjct: 349 GPHYCPGGMLAR 360
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 358 VKESLRM-ASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF-NPS 415
V+E LR+ S PRL D ++ +++ G V + + + D P F NP
Sbjct: 270 VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD------PEHFPNPG 323
Query: 416 RFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMF 475
+ D P + F G CLG + + + + L+ K +D ID+
Sbjct: 324 SIELDRPNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLK--KMPGVDLAVPIDQLVWR 381
Query: 476 ARLKSGCP 483
R + P
Sbjct: 382 TRFQRRIP 389
>pdb|1WBD|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38q Mutant, In Complex With A G.T Mismatch
pdb|1WBD|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38q Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMP 352
D I T + A D + T+MV+ ++E +L LM+ + T + L+
Sbjct: 651 DRIFTRVGAADDLASGRSTFMVE-MTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAW 709
Query: 353 YASKVVKESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
++ + ++ ++ A Y L ++EG ++HLD+ H +
Sbjct: 710 ACAENLANKIKALTLFATHYFELTQLPEKMEGVA------------NVHLDALEHGDTIA 757
Query: 412 FNPSRFDGDESKPYGSIPFSMGG 434
F S DG SK YG ++ G
Sbjct: 758 FMHSVQDGAASKSYGLAVAALAG 780
>pdb|1WBB|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38a Mutant, In Complex With A G.T Mismatch
pdb|1WBB|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38a Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMP 352
D I T + A D + T+MV+ ++E +L LM+ + T + L+
Sbjct: 651 DRIFTRVGAADDLASGRSTFMVE-MTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAW 709
Query: 353 YASKVVKESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
++ + ++ ++ A Y L ++EG ++HLD+ H +
Sbjct: 710 ACAENLANKIKALTLFATHYFELTQLPEKMEGVA------------NVHLDALEHGDTIA 757
Query: 412 FNPSRFDGDESKPYGSIPFSMGG 434
F S DG SK YG ++ G
Sbjct: 758 FMHSVQDGAASKSYGLAVAALAG 780
>pdb|1OH5|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
A C:a Mismatch
pdb|1OH5|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
A C:a Mismatch
pdb|1OH6|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
An A:a Mismatch
pdb|1OH6|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
An A:a Mismatch
pdb|1OH7|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
A G:g Mismatch
pdb|1OH7|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
A G:g Mismatch
pdb|1OH8|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
An Unpaired Thymidine
pdb|1OH8|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
An Unpaired Thymidine
pdb|1W7A|A Chain A, Atp Bound Muts
pdb|1W7A|B Chain B, Atp Bound Muts
pdb|2WTU|A Chain A, Crystal Structure Of Escherichia Coli Muts In Complex With
A 16 Basepair Oligo Containing An A.A Mismatch.
pdb|2WTU|B Chain B, Crystal Structure Of Escherichia Coli Muts In Complex With
A 16 Basepair Oligo Containing An A.A Mismatch
Length = 800
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMP 352
D I T + A D + T+MV+ ++E +L LM+ + T + L+
Sbjct: 651 DRIFTRVGAADDLASGRSTFMVE-MTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAW 709
Query: 353 YASKVVKESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
++ + ++ ++ A Y L ++EG ++HLD+ H +
Sbjct: 710 ACAENLANKIKALTLFATHYFELTQLPEKMEGVA------------NVHLDALEHGDTIA 757
Query: 412 FNPSRFDGDESKPYGSIPFSMGG 434
F S DG SK YG ++ G
Sbjct: 758 FMHSVQDGAASKSYGLAVAALAG 780
>pdb|1WB9|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38t Mutant, In Complex With A G.T Mismatch
pdb|1WB9|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38t Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMP 352
D I T + A D + T+MV+ ++E +L LM+ + T + L+
Sbjct: 651 DRIFTRVGAADDLASGRSTFMVE-MTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAW 709
Query: 353 YASKVVKESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYK 411
++ + ++ ++ A Y L ++EG ++HLD+ H +
Sbjct: 710 ACAENLANKIKALTLFATHYFELTQLPEKMEGVA------------NVHLDALEHGDTIA 757
Query: 412 FNPSRFDGDESKPYGSIPFSMGG 434
F S DG SK YG ++ G
Sbjct: 758 FMHSVQDGAASKSYGLAVAALAG 780
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,934,376
Number of Sequences: 62578
Number of extensions: 498121
Number of successful extensions: 1655
Number of sequences better than 100.0: 213
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 243
length of query: 498
length of database: 14,973,337
effective HSP length: 103
effective length of query: 395
effective length of database: 8,527,803
effective search space: 3368482185
effective search space used: 3368482185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)