Query         010899
Match_columns 498
No_of_seqs    192 out of 2066
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 05:50:04 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010899hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-80 2.3E-85  590.4  45.8  435   36-489    25-487 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 4.1E-79 8.8E-84  569.9  43.6  456   21-490    16-499 (499)
  3 PLN02500 cytochrome P450 90B1  100.0 2.1E-78 4.5E-83  594.1  46.4  436   32-489    33-489 (490)
  4 PLN02774 brassinosteroid-6-oxi 100.0 1.9E-78   4E-83  589.6  43.3  435   31-488    25-462 (463)
  5 PLN02196 abscisic acid 8'-hydr 100.0 8.9E-77 1.9E-81  577.2  44.7  461    1-489     1-462 (463)
  6 PLN03141 3-epi-6-deoxocathaste 100.0   6E-76 1.3E-80  570.7  43.9  437   33-490     3-450 (452)
  7 PLN02302 ent-kaurenoic acid ox 100.0 3.6E-75 7.9E-80  574.0  49.6  444   31-491    36-489 (490)
  8 PLN02971 tryptophan N-hydroxyl 100.0 2.2E-75 4.7E-80  577.1  45.6  451   22-491    42-535 (543)
  9 PLN00168 Cytochrome P450; Prov 100.0 2.5E-74 5.4E-79  568.2  45.7  474    1-491     1-518 (519)
 10 PLN02290 cytokinin trans-hydro 100.0 2.9E-74 6.3E-79  569.0  45.5  440   36-490    41-515 (516)
 11 KOG0157 Cytochrome P450 CYP4/C 100.0 4.5E-75 9.8E-80  564.4  38.2  434   35-490    33-496 (497)
 12 PLN02687 flavonoid 3'-monooxyg 100.0 7.2E-74 1.6E-78  564.7  44.4  444   31-490    28-509 (517)
 13 PLN00110 flavonoid 3',5'-hydro 100.0 9.8E-74 2.1E-78  560.1  44.9  441   33-494    27-501 (504)
 14 PLN02183 ferulate 5-hydroxylas 100.0 1.3E-73 2.9E-78  562.6  44.1  443   35-489    34-511 (516)
 15 PLN03234 cytochrome P450 83B1; 100.0 2.5E-73 5.4E-78  560.4  44.9  441   31-489    22-498 (499)
 16 PLN02987 Cytochrome P450, fami 100.0 9.1E-73   2E-77  546.8  46.3  437   33-492    26-471 (472)
 17 PTZ00404 cytochrome P450; Prov 100.0 2.5E-73 5.3E-78  558.1  42.2  431   35-489    27-482 (482)
 18 PLN02394 trans-cinnamate 4-mon 100.0   1E-72 2.2E-77  556.7  45.4  438   31-490    24-502 (503)
 19 PLN03112 cytochrome P450 famil 100.0 3.3E-72 7.1E-77  554.1  44.6  439   31-490    26-508 (514)
 20 PLN02966 cytochrome P450 83A1  100.0   2E-72 4.4E-77  552.9  42.8  442   33-491    25-499 (502)
 21 KOG0684 Cytochrome P450 [Secon 100.0 3.9E-71 8.5E-76  490.7  39.0  432   37-490    31-485 (486)
 22 PLN02169 fatty acid (omega-1)- 100.0 1.2E-70 2.5E-75  537.3  45.4  429   38-489    32-499 (500)
 23 PLN03018 homomethionine N-hydr 100.0 2.8E-70   6E-75  536.3  48.2  440   32-491    35-525 (534)
 24 PF00067 p450:  Cytochrome P450 100.0 2.3E-71 5.1E-76  546.7  37.2  428   39-486     1-463 (463)
 25 PLN03195 fatty acid omega-hydr 100.0 2.4E-70 5.2E-75  540.6  42.6  429   39-490    32-516 (516)
 26 PLN02655 ent-kaurene oxidase   100.0 2.7E-70 5.9E-75  532.7  41.8  427   39-490     1-464 (466)
 27 KOG0159 Cytochrome P450 CYP11/ 100.0 2.2E-70 4.7E-75  498.7  38.0  435   34-491    47-519 (519)
 28 PLN02738 carotene beta-ring hy 100.0 3.8E-69 8.3E-74  533.6  41.5  410   61-491   150-596 (633)
 29 PLN02936 epsilon-ring hydroxyl 100.0   3E-68 6.5E-73  520.6  40.7  432   40-494    15-486 (489)
 30 PLN02426 cytochrome P450, fami 100.0 5.1E-65 1.1E-69  496.6  45.0  418   45-491    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 2.1E-62 4.7E-67  470.4  29.5  406   33-468    13-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.9E-57 1.1E-61  428.8  34.6  380   64-489    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  72.4      15 0.00033   22.7   4.8   43  289-331     5-47  (48)
 34 PF15330 SIT:  SHP2-interacting  68.7      17 0.00037   27.2   5.3   11   44-54     45-55  (107)
 35 PF12508 DUF3714:  Protein of u  67.5     1.6 3.5E-05   36.7  -0.2   44  350-394    51-94  (200)
 36 PF05952 ComX:  Bacillus compet  66.4     6.3 0.00014   25.3   2.3   20  312-331     4-23  (57)
 37 PF01102 Glycophorin_A:  Glycop  65.5       9 0.00019   29.3   3.4   15   18-32     80-94  (122)
 38 TIGR00847 ccoS cytochrome oxid  63.1      12 0.00027   23.4   3.1   25    1-25      1-25  (51)
 39 PF13260 DUF4051:  Protein of u  54.1      36 0.00078   20.6   3.8   27    6-32      2-28  (54)
 40 KOG0114 Predicted RNA-binding   49.9      54  0.0012   24.2   4.9   63   33-103     8-76  (124)
 41 TIGR03779 Bac_Flav_CT_M Bacter  46.8     4.7  0.0001   38.1  -0.9   44  351-395   255-298 (410)
 42 PF15050 SCIMP:  SCIMP protein   43.3 1.1E+02  0.0024   23.2   5.7   17   35-51     66-83  (133)
 43 COG3197 FixS Uncharacterized p  39.0      40 0.00088   21.6   2.6   25    1-25      1-25  (58)
 44 PF12444 Sox_N:  Sox developmen  36.9      27 0.00059   24.7   1.8   20  445-464    60-79  (84)
 45 PF14851 FAM176:  FAM176 family  36.1      61  0.0013   26.1   3.9   39    4-42     21-59  (153)
 46 PHA03049 IMV membrane protein;  34.9 1.3E+02  0.0028   20.0   4.4   22   29-50     23-44  (68)
 47 PHA02902 putative IMV membrane  34.5 1.4E+02  0.0029   19.7   4.9   11   19-29     17-27  (70)
 48 PRK06789 flagellar motor switc  33.4      41 0.00088   23.2   2.2   38  358-395    22-62  (74)
 49 KOG3506 40S ribosomal protein   33.2      20 0.00043   22.6   0.6   11  428-438    12-22  (56)
 50 PF11227 DUF3025:  Protein of u  32.3      31 0.00067   29.3   1.8   21  396-416   191-211 (212)
 51 KOG3653 Transforming growth fa  32.2 1.6E+02  0.0036   28.7   6.6   38   73-110   221-258 (534)
 52 PF09926 DUF2158:  Uncharacteri  30.2      49  0.0011   21.0   2.0   19   74-92      2-20  (53)
 53 KOG2311 NAD/FAD-utilizing prot  28.8      32  0.0007   33.3   1.5   46  360-421   220-266 (679)
 54 PF14483 Cut8_M:  Cut8 dimerisa  28.8      81  0.0018   18.4   2.6   20  310-329    15-35  (38)
 55 PF07849 DUF1641:  Protein of u  28.2      75  0.0016   19.0   2.5   18  311-328    13-30  (42)
 56 PF03597 CcoS:  Cytochrome oxid  27.0 1.2E+02  0.0025   18.6   3.2   18    6-23      5-22  (45)
 57 PF13893 RRM_5:  RNA recognitio  27.0 1.6E+02  0.0034   18.5   4.2   33   70-102     3-39  (56)
 58 COG1707 ACT domain-containing   25.8      87  0.0019   25.3   3.1   38   61-98    153-195 (218)
 59 PF13625 Helicase_C_3:  Helicas  25.2 1.6E+02  0.0035   22.8   4.7   40   63-104    75-114 (129)
 60 PF08492 SRP72:  SRP72 RNA-bind  24.8      49  0.0011   21.6   1.4    7  413-419    44-50  (59)
 61 COG2101 SPT15 TATA-box binding  24.6      21 0.00045   29.0  -0.4   32  410-441    35-70  (185)
 62 PHA03162 hypothetical protein;  24.1      45 0.00098   25.6   1.3   24  431-454     2-25  (135)
 63 PF09201 SRX:  SRX;  InterPro:   24.0      68  0.0015   25.0   2.2   24  435-458    18-41  (148)
 64 PRK02302 hypothetical protein;  23.8 2.3E+02  0.0049   20.4   4.6   36   67-103    19-54  (89)
 65 PRK02886 hypothetical protein;  21.2 2.8E+02  0.0061   19.9   4.6   36   67-103    17-52  (87)
 66 COG4471 Uncharacterized protei  21.2 2.8E+02  0.0061   19.8   4.5   34   69-103    20-53  (90)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-80  Score=590.38  Aligned_cols=435  Identities=26%  Similarity=0.393  Sum_probs=353.6

Q ss_pred             CCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchh-h
Q 010899           36 VSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYI-K  114 (498)
Q Consensus        36 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~-~  114 (498)
                      .+.||||++||++||++++.     ...+|+.+.++.++|||||.+++|..++|||+|+++++|++++++..|++|+. .
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~-----~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~   99 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLG-----SLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPT   99 (489)
T ss_pred             CCCCcCCCCCCccccHHHcC-----CCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            78999999999999999993     22499999999999999999999999999999999999999999999999986 2


Q ss_pred             hh-hhhh-CCCcceec-ccHhHHHHHHHHH-hccChhhHHhhHHHHHHHHHHHHHhhhh--cCcchhhHHHHHhhHHHHH
Q 010899          115 SV-GEIV-GDNSVLCA-STQRHKLIRSRLA-NLFSLSSLSIFTKQFDQLVLENLSDWEH--KAATVVVLREALKVTFKAM  188 (498)
Q Consensus       115 ~~-~~~~-g~~~l~~~-~g~~~~~~R~~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~--~~~~~d~~~~~~~~~~~~i  188 (498)
                      .. ..+. |+.++..+ +|+.|+.+||+.. ..++...+++....-.++++++++.+.+  ++.++|+...+..++.++|
T Consensus       100 ~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI  179 (489)
T KOG0156|consen  100 ATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVI  179 (489)
T ss_pred             hhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHH
Confidence            22 3333 55677777 7999999999964 5677888888877778888888888753  2138999999999999999


Q ss_pred             HHHHccCCcch----hHHHHHHHHHHHHHHHhccCC--CCc-hHHH--------HhhhhHHHHHHHHHHHHHHHHHccc-
Q 010899          189 CKILLSLESGK----ELEMLENDVTRVYDAMLAFPL--KLP-WTKF--------YRGVKARKRIMRTLEKMINIRRKGL-  252 (498)
Q Consensus       189 ~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~p-~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~-  252 (498)
                      ++.+||.+...    ....+.+.+....+....+..  ++| +..+        ++......++..++++.|+++++.. 
T Consensus       180 ~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~  259 (489)
T KOG0156|consen  180 CRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG  259 (489)
T ss_pred             HHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999553    233344555444444333221  233 2111        2223333457888888888886642 


Q ss_pred             -ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010899          253 -ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEH  331 (498)
Q Consensus       253 -~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei  331 (498)
                       +...|++|.+++..++++            ...+++++|.+.+.++++||+|||++++.|++.+|++||++|+|+++||
T Consensus       260 ~~~~~D~vD~lL~~~~~~~------------~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEI  327 (489)
T KOG0156|consen  260 DEEGRDFVDALLKLMKEEK------------AEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEI  327 (489)
T ss_pred             cCCCCcHHHHHHHhhcccc------------cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence             223799999998865421            1129999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCC
Q 010899          332 FPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPY  410 (498)
Q Consensus       332 ~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  410 (498)
                      +++++.+  +.++.+|+.+||||+|||+|++|+||++|. ++|.+++|+.|+||.|||||.|+++.|++||||++|+||+
T Consensus       328 d~vvG~~--r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~  405 (489)
T KOG0156|consen  328 DEVVGKG--RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPE  405 (489)
T ss_pred             HHHhCCC--CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCcc
Confidence            9999763  449999999999999999999999999996 8999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC---CCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEe
Q 010899          411 KFNPSRFDGDE---SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVK  487 (498)
Q Consensus       411 ~F~PeR~l~~~---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  487 (498)
                      +|+||||++.+   +....++|||.|+|.|||..+|++++.++++.|+++|||+++++..+.+....+...+.++.+...
T Consensus       406 eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~~~~~~~~~pl~~~~~  485 (489)
T KOG0156|consen  406 EFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEAGLTLKKKKPLKAVPV  485 (489)
T ss_pred             ccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCcccccceecCCcceeeee
Confidence            99999999962   246789999999999999999999999999999999999998762222222233334445555554


Q ss_pred             ec
Q 010899          488 ST  489 (498)
Q Consensus       488 ~r  489 (498)
                      +|
T Consensus       486 ~r  487 (489)
T KOG0156|consen  486 PR  487 (489)
T ss_pred             cC
Confidence            44


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.1e-79  Score=569.91  Aligned_cols=456  Identities=22%  Similarity=0.303  Sum_probs=355.3

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHH
Q 010899           21 LIIMNTKKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKII  100 (498)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~i  100 (498)
                      ++++++++...+|... -+|||+++|++||+..+...   ..........+. ++||++.+..+..+.++|+||++|++|
T Consensus        16 l~y~~~~~~~~yw~rr-Gi~~~~p~p~~Gn~~~~~~~---~~~~~~~~~~~~-~~~~~~G~y~~~~p~l~v~D~elik~I   90 (499)
T KOG0158|consen   16 LLYLWLRWTYSYWRRR-GIPGPKPLPFLGNLPGMLKR---ERPGDLLLDIYT-KYRPVVGIYEGRQPALLVSDPELIKEI   90 (499)
T ss_pred             HHHHHHHhhhhhhccC-CCCCCCCCCcEecHHHHHhc---cCcHHHHHHHHh-cCCCEEEEEecCCcceEecCHHHHHHH
Confidence            3344444444455544 56888889999999998632   112333344444 559999999999999999999999999


Q ss_pred             HhhcCCccccc--hhhhhhh-hhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHhhhhcCc---ch
Q 010899          101 LNNEGENFTKR--YIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAA---TV  174 (498)
Q Consensus       101 l~~~~~~~~~~--~~~~~~~-~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~  174 (498)
                      +.++.++|.++  ....-.. .++..+++..+|++||++|..++|.|+..+++.+.+.+++...++++.+.....   .+
T Consensus        91 ~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~  170 (499)
T KOG0158|consen   91 LIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEG  170 (499)
T ss_pred             HHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCc
Confidence            99999999994  3222111 344467888999999999999999999999999999999999999988844322   77


Q ss_pred             hhHHHHHhhHHHHHHHHHccCCcchhH---HHHHHHHHHHHHH-HhccCC------CCchHHH-----HhhhhHHHHHHH
Q 010899          175 VVLREALKVTFKAMCKILLSLESGKEL---EMLENDVTRVYDA-MLAFPL------KLPWTKF-----YRGVKARKRIMR  239 (498)
Q Consensus       175 d~~~~~~~~~~~~i~~~~fG~~~~~~~---~~~~~~~~~~~~~-~~~~~~------~~p~~~~-----~~~~~~~~~~~~  239 (498)
                      ++.+....+++|+|++++||.+.+...   ..+...-...... ...++.      .+|....     .........+.+
T Consensus       171 ~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~  250 (499)
T KOG0158|consen  171 EIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRK  250 (499)
T ss_pred             cHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHH
Confidence            888888899999999999999844322   1121111111111 111111      1111110     112234455667


Q ss_pred             HHHHHHHHHHcccccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhh
Q 010899          240 TLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSE  319 (498)
Q Consensus       240 ~~~~~i~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  319 (498)
                      .+.+.++.|........|+++.+++....+.      .....++ .++.++|+++|..+++||.||||+++++++|+|++
T Consensus       251 ~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~------~~~~~~~-~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~  323 (499)
T KOG0158|consen  251 LVNSRVEQREKENIERNDFIDLLLDARASDF------AKSKSHK-ALTDDEIAAQAFVFLLAGFETTASTLSFALYELAK  323 (499)
T ss_pred             HHHHHHHHHHhcCCCCchHHHHHHHhhcccc------ccccccc-ccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc
Confidence            7777777775555678899999998875310      0011111 69999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCcccc-CeEecCCcEEeecccc
Q 010899          320 NEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIE-GYVIKAGWSVNIDAKS  398 (498)
Q Consensus       320 ~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~  398 (498)
                      |||+|+|||+||+++....  ..+|++.+.+|+||++||+||||+||+++.+.|.|++|++++ ++.||||+.|.++.++
T Consensus       324 ~PdvQ~kLreEI~~~~~~~--~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~a  401 (499)
T KOG0158|consen  324 NPDVQDKLREEIDEVLEEK--EGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYA  401 (499)
T ss_pred             ChHHHHHHHHHHHHHhccc--CCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeeccc
Confidence            9999999999999997543  229999999999999999999999999999999999999999 9999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCC---CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccc---
Q 010899          399 IHLDSTVHSNPYKFNPSRFDGDES---KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKW---  472 (498)
Q Consensus       399 ~~~d~~~~~~p~~F~PeR~l~~~~---~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~---  472 (498)
                      +||||++||||++|+||||.+.+.   ++..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+........   
T Consensus       402 lH~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~  481 (499)
T KOG0158|consen  402 LHHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPK  481 (499)
T ss_pred             ccCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCcc
Confidence            999999999999999999997653   47899999999999999999999999999999999999987732222222   


Q ss_pred             cccccCCCCcceEEeecc
Q 010899          473 AMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       473 ~~~~~~~~~~~v~~~~r~  490 (498)
                      ..+..|++|+++++++|+
T Consensus       482 ~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  482 GFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ceeeecCCceEEEEEeCC
Confidence            455889999999999984


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.1e-78  Score=594.06  Aligned_cols=436  Identities=29%  Similarity=0.567  Sum_probs=355.1

Q ss_pred             CCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccc
Q 010899           32 GRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKR  111 (498)
Q Consensus        32 ~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~  111 (498)
                      .+++.+.||||+++|++||++.+.... ..+.++.++.+++++||+||++++|+.++|+++||+++++++.+++..|+.+
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~-~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPY-SATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhc-ccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            355567899999999999987664211 1245788899999999999999999999999999999999999887778655


Q ss_pred             hhhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHh-hHHHHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHHHHH
Q 010899          112 YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSI-FTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCK  190 (498)
Q Consensus       112 ~~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~  190 (498)
                      +.......+|..+++..+|+.|+++|+++++.|+..+++. +.+.+.+.+.++++.|..++ .+|+.+.+..++++++++
T Consensus       112 ~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~~~~vi~~  190 (490)
T PLN02500        112 YPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENS-TFSAQDEAKKFTFNLMAK  190 (490)
T ss_pred             CchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCC-CEEehHHHHHHHHHHHHH
Confidence            4333344566556777899999999999999999998887 56788888888888886655 789999999999999999


Q ss_pred             HHccCCcch-hHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHccc------ccchhHHHhhh
Q 010899          191 ILLSLESGK-ELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGL------ETHEDFLQCLL  263 (498)
Q Consensus       191 ~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~ll  263 (498)
                      ++||.+.+. ....+.+.+..+.......+..+|...+++..++++.+.+++.+.++++++..      ....|+++.++
T Consensus       191 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  270 (490)
T PLN02500        191 HIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVL  270 (490)
T ss_pred             HHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHH
Confidence            999987432 23333344444433332233345544445666677788888888887765421      12468998888


Q ss_pred             hhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhh---ccC
Q 010899          264 AEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMER---TKK  340 (498)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~---~~~  340 (498)
                      +..                  .++++++++++.++++||+|||+++++|++++|++|||+|+|+++|++++.+.   .++
T Consensus       271 ~~~------------------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~  332 (490)
T PLN02500        271 KHS------------------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGE  332 (490)
T ss_pred             hcc------------------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCC
Confidence            531                  48899999999999999999999999999999999999999999999998732   122


Q ss_pred             CCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCC
Q 010899          341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGD  420 (498)
Q Consensus       341 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~  420 (498)
                      ..++.+++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|.++.|++||||++|+||++|+||||+++
T Consensus       333 ~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~  412 (490)
T PLN02500        333 SELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQN  412 (490)
T ss_pred             CCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCC
Confidence            45899999999999999999999999999888999999999999999999999999999999999999999999999974


Q ss_pred             CC----------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEeec
Q 010899          421 ES----------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKST  489 (498)
Q Consensus       421 ~~----------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  489 (498)
                      ++          ++..|+|||.|+|.|+|++||++|+++++++|+++|+|++.+++.... .+. ..+.++++|++++.
T Consensus       413 ~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~~-~~~~~~l~~~~~~~  489 (490)
T PLN02500        413 NNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FPF-VDFPKGLPIRVRRI  489 (490)
T ss_pred             CcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-ccc-ccCCCCceEEEEeC
Confidence            32          246799999999999999999999999999999999999877654332 233 45668999999863


No 4  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.9e-78  Score=589.57  Aligned_cols=435  Identities=29%  Similarity=0.493  Sum_probs=361.7

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      .++...+.||||+++|++||++.+.      +++..++++++++||++|++++|+.++++++||+++++++.++...|..
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~~------~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~   98 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEFL------KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVP   98 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHHH------HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEe
Confidence            3344457789999999999998873      3456788999999999999999999999999999999999887777755


Q ss_pred             chhhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHh-hHHHHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHHHH
Q 010899          111 RYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSI-FTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC  189 (498)
Q Consensus       111 ~~~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~i~  189 (498)
                      +........+|..+++..+|+.|+++|+.+.+.|++..++. +.+.+.+.+.+++++|..++ ++|+.+.+..+++++++
T Consensus        99 ~~~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774         99 GYPQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLK-TIDIQEKTKEMALLSAL  177 (463)
T ss_pred             cCCHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCC-CEEeeHHHHHHHHHHHH
Confidence            43333345667667777899999999999999999999886 68999998999999987655 79999999999999999


Q ss_pred             HHHccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHcccccchhHHHhhhhhhccc
Q 010899          190 KILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVD  269 (498)
Q Consensus       190 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~~~  269 (498)
                      +++||...+.....+.+.+..+......++.++|...+++..++++.+.+.+.+.++++++......|+++.++....  
T Consensus       178 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~--  255 (463)
T PLN02774        178 KQIAGTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKEG--  255 (463)
T ss_pred             HHHcCCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCcc--
Confidence            999998654433344444444433333344456655556677788889999999998887654455799999886321  


Q ss_pred             hhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhc-cCCCCChhhh
Q 010899          270 KDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERT-KKSLLTLEDL  348 (498)
Q Consensus       270 ~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~l  348 (498)
                                  .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.. .+..++.+++
T Consensus       256 ------------~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l  323 (463)
T PLN02774        256 ------------NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDY  323 (463)
T ss_pred             ------------CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHH
Confidence                        223589999999999999999999999999999999999999999999999987532 2356899999


Q ss_pred             cCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC-CCCcc
Q 010899          349 NRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES-KPYGS  427 (498)
Q Consensus       349 ~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~-~~~~~  427 (498)
                      +++|||+|||+|+||++|+++.++|.+++|++++||.||||+.|.++.+.+||||++|+||++|+||||++.+. ....+
T Consensus       324 ~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~  403 (463)
T PLN02774        324 KSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYF  403 (463)
T ss_pred             hcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999997442 23469


Q ss_pred             ccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEee
Q 010899          428 IPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKS  488 (498)
Q Consensus       428 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  488 (498)
                      +|||+|+|.|||++||++|++++++.||++|+|++.++++. ...+ +..|++|++|++++
T Consensus       404 lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~-~~~~-~~~p~~g~~~~~~~  462 (463)
T PLN02774        404 FLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL-MKFP-RVEAPNGLHIRVSP  462 (463)
T ss_pred             cCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc-ccCC-CCCCCCCceEEeee
Confidence            99999999999999999999999999999999999776542 2222 35689999999985


No 5  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.9e-77  Score=577.19  Aligned_cols=461  Identities=30%  Similarity=0.519  Sum_probs=372.2

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEE
Q 010899            1 MDETLFLYGYIVFVIGIVIILIIMNTKKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFR   80 (498)
Q Consensus         1 m~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~   80 (498)
                      |+.....+.+.+++++++++.++..  ......++.+.||||+++|++||++++.     .++++.++.+++++||+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ppgp~~~P~iG~~~~~~-----~~~~~~~~~~~~~~yG~i~~   73 (463)
T PLN02196          1 MDFSALFLTLFAGALFLCLLRFLAG--FRRSSSTKLPLPPGTMGWPYVGETFQLY-----SQDPNVFFASKQKRYGSVFK   73 (463)
T ss_pred             CchHhhhhHHHHHHHHHHHHHHHHH--hccCCCCCCCCCCCCCCCCccchHHHHH-----hcCHHHHHHHHHHHhhhhhe
Confidence            4444444444444443333333322  2334456678899999999999988764     45688899999999999999


Q ss_pred             eccCCcceEEEcCHHHHHHHHhhcCCccccchhhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHH
Q 010899           81 TNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLV  160 (498)
Q Consensus        81 ~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~  160 (498)
                      ++++++++|+++||+++++++.++...|...........+|..+++..+|+.|+++|+++++.|++++++.+.+.+.+.+
T Consensus        74 ~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~  153 (463)
T PLN02196         74 THVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIA  153 (463)
T ss_pred             eeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence            99999999999999999999988877674432222233566667888899999999999999999999999999999999


Q ss_pred             HHHHHhhhhcCcchhhHHHHHhhHHHHHHHHHccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHH
Q 010899          161 LENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRT  240 (498)
Q Consensus       161 ~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  240 (498)
                      .++++.|.+ + .+++.+++..+++++++.++||.+.......+.+.+..+...+..++..+|....++..++++.+.+.
T Consensus       154 ~~~~~~~~~-~-~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~  231 (463)
T PLN02196        154 QESLNSWEG-T-QINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQI  231 (463)
T ss_pred             HHHHHcCCC-C-eEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHH
Confidence            999999853 3 78999999999999999999998743322333333332222222334444543345666778888889


Q ss_pred             HHHHHHHHHcccccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhC
Q 010899          241 LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSEN  320 (498)
Q Consensus       241 ~~~~i~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  320 (498)
                      +.+.++++++......|+++.+++.                 +..++++++.+++..+++||+|||+++++|++++|++|
T Consensus       232 ~~~~i~~~~~~~~~~~d~l~~ll~~-----------------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~  294 (463)
T PLN02196        232 LAKILSKRRQNGSSHNDLLGSFMGD-----------------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAEN  294 (463)
T ss_pred             HHHHHHHHhhcCCCcccHHHHHHhc-----------------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence            9988888776544567888888742                 12589999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhc-cCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccc
Q 010899          321 EEVLDKLKAEHFPLMERT-KKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSI  399 (498)
Q Consensus       321 P~~~~kl~~Ei~~~~~~~-~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~  399 (498)
                      |++|+|+++|++++.+.. .+..++.++++++|||+|||+|+||++|+++...|.+.+|++++||.||||+.|.++.+++
T Consensus       295 P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~  374 (463)
T PLN02196        295 PSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNI  374 (463)
T ss_pred             HHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHh
Confidence            999999999999887432 2356899999999999999999999999999888999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCC
Q 010899          400 HLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLK  479 (498)
Q Consensus       400 ~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  479 (498)
                      ||||++|+||++|+||||+. +..+..++|||.|+|.|+|+++|++|++++++.|+++|+|++.+++....+.. +..|+
T Consensus       375 ~rd~~~~~dP~~F~PeRfl~-~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~-~~~p~  452 (463)
T PLN02196        375 HHSADIFSDPGKFDPSRFEV-APKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGP-FALPQ  452 (463)
T ss_pred             cCCchhcCCcCccChhhhcC-CCCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcc-cccCC
Confidence            99999999999999999997 34567899999999999999999999999999999999999877655444433 36799


Q ss_pred             CCcceEEeec
Q 010899          480 SGCPIHVKST  489 (498)
Q Consensus       480 ~~~~v~~~~r  489 (498)
                      ++++|++++.
T Consensus       453 ~~~~~~~~~~  462 (463)
T PLN02196        453 NGLPIALSRK  462 (463)
T ss_pred             CCceEEEecC
Confidence            9999999864


No 6  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6e-76  Score=570.73  Aligned_cols=437  Identities=31%  Similarity=0.589  Sum_probs=366.5

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccch
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRY  112 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~  112 (498)
                      +++.+.||||.++|++||++.+.... ...+++.++.+++++||+||++++|+.+.|+++||+++++++.+++..|..++
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~-~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCA-YSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhc-ccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            45566799999999999998874210 02458899999999999999999999999999999999999998888887665


Q ss_pred             hhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhh-HHHHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHHHHHH
Q 010899          113 IKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF-TKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKI  191 (498)
Q Consensus       113 ~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~  191 (498)
                      ......++|..+++..+|+.|+++|+++++.|+...+... .+.+.+.+.+.++.|..++ .+++.+.+..+++++++++
T Consensus        82 ~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vi~~~  160 (452)
T PLN03141         82 PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDP-PVLVQDETKKIAFEVLVKA  160 (452)
T ss_pred             chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCC-CEEhHHHHHHHHHHHHHHH
Confidence            4444456776678888999999999999999988777764 5677777777888775555 7899999999999999999


Q ss_pred             HccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHcccc--------cchhHHHhhh
Q 010899          192 LLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLE--------THEDFLQCLL  263 (498)
Q Consensus       192 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~~~ll  263 (498)
                      +||.+.+.....+.+.+..+...+..++.++|.+.+.+..++.+++.+++.+.++++++...        ...|+++.++
T Consensus       161 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll  240 (452)
T PLN03141        161 LISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLL  240 (452)
T ss_pred             HcCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHH
Confidence            99987655555555666655555555565666655566667788899999999888765431        1368888888


Q ss_pred             hhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhh--ccCC
Q 010899          264 AEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMER--TKKS  341 (498)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~  341 (498)
                      +..                +..++++++..++..+++||+|||+.+++|++++|++||++|+|+++|++++.+.  ..+.
T Consensus       241 ~~~----------------~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~  304 (452)
T PLN03141        241 RDG----------------SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGE  304 (452)
T ss_pred             hcC----------------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCC
Confidence            642                2258999999999999999999999999999999999999999999999987632  1234


Q ss_pred             CCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCC
Q 010899          342 LLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDE  421 (498)
Q Consensus       342 ~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~  421 (498)
                      .++.+++.++|||+|||+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+
T Consensus       305 ~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~  384 (452)
T PLN03141        305 PLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD  384 (452)
T ss_pred             CCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC
Confidence            67999999999999999999999999988899999999999999999999999999999999999999999999999865


Q ss_pred             CCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEeecc
Q 010899          422 SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       422 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  490 (498)
                      ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|+|++.++.. . . ..+..|+++++|.+++|+
T Consensus       385 ~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        385 MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-V-N-FPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-e-e-cccccCCCCceEEEEeCC
Confidence            5677899999999999999999999999999999999999765432 2 2 235789999999999995


No 7  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=3.6e-75  Score=574.02  Aligned_cols=444  Identities=30%  Similarity=0.498  Sum_probs=366.5

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCC--eEEeccCCcceEEEcCHHHHHHHHhhcCCcc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGD--CFRTNIFATTNVFFSSTGAAKIILNNEGENF  108 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~  108 (498)
                      ......+.||||+++|++||++++..... ..+++.++.+++++||+  ||++++++.+.|+++||+++++++.++ ..|
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~-~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f  113 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFK-SSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAF  113 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcc-cCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccc
Confidence            34556678999999999999998854221 35688899999999997  799999999999999999999999765 556


Q ss_pred             ccchhhhhhhhhCCCcceecccHhHHHHHHHHHhccC-hhhHHhhHHHHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHH
Q 010899          109 TKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS-LSSLSIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKA  187 (498)
Q Consensus       109 ~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~  187 (498)
                      .+++.......+|..++...+|+.|+++|+.+++.|+ .++++.+.+.+.+.+.++++.+..++ .+|+..++..+++++
T Consensus       114 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~v  192 (490)
T PLN02302        114 EPGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMG-EIEFLTELRKLTFKI  192 (490)
T ss_pred             ccCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCC-CEehHHHHHHHHHHH
Confidence            6553322223566556666789999999999999995 78899999999999999999986555 799999999999999


Q ss_pred             HHHHHccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHccc-----ccchhHHHhh
Q 010899          188 MCKILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGL-----ETHEDFLQCL  262 (498)
Q Consensus       188 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l  262 (498)
                      +++++||.+.+.....+.+.+..+...+...+..+|...+.+..++.+.+.+.+.+.++++++..     ....|+++.+
T Consensus       193 i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l  272 (490)
T PLN02302        193 IMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLL  272 (490)
T ss_pred             HHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHH
Confidence            99999998865544444444433333333333345544455556667778888888888776432     2357899999


Q ss_pred             hhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhcc--C
Q 010899          263 LAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTK--K  340 (498)
Q Consensus       263 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~--~  340 (498)
                      ++..++             ++..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++.+...  .
T Consensus       273 l~~~~~-------------~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~  339 (490)
T PLN02302        273 LDAEDE-------------NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQ  339 (490)
T ss_pred             Hhhhcc-------------CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCC
Confidence            876432             2335899999999999999999999999999999999999999999999999885321  1


Q ss_pred             CCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCC
Q 010899          341 SLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGD  420 (498)
Q Consensus       341 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~  420 (498)
                      ..++.++++++|||+|||+|+||++|+++..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.
T Consensus       340 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~  419 (490)
T PLN02302        340 KGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNY  419 (490)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCC
Confidence            23789999999999999999999999999888999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEeeccc
Q 010899          421 ESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKSTNM  491 (498)
Q Consensus       421 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  491 (498)
                      ...+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.++...+.+... ..|.++++|++++|..
T Consensus       420 ~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        420 TPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPH-PRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCC-CCCCCCceEEEEeccC
Confidence            556678999999999999999999999999999999999998876555554443 7899999999998864


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.2e-75  Score=577.07  Aligned_cols=451  Identities=17%  Similarity=0.265  Sum_probs=345.6

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcC-CeEEeccCCcceEEEcCHHHHHHH
Q 010899           22 IIMNTKKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYG-DCFRTNIFATTNVFFSSTGAAKII  100 (498)
Q Consensus        22 ~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~~~~v~~i  100 (498)
                      ++.......+..++.+.||||+++|++||++++..    ....+.++.++.++|| +||++++|+.++|+|+||++++++
T Consensus        42 ~~~~~~~~~~~~r~~~lPPGP~~lPiiGnl~~l~~----~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikev  117 (543)
T PLN02971         42 ILKKLKSSSRNKKLHPLPPGPTGFPIVGMIPAMLK----NRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREI  117 (543)
T ss_pred             HHHHHHhhcccCCCCCCCcCCCCCCcccchHHhcc----CCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHH
Confidence            33333333444456678999999999999988741    2235778889999999 899999999999999999999999


Q ss_pred             HhhcCCccccchhhhhhhhhCCC---cceecccHhHHHHHHHHHhc-cChhhHHhhHHHHHHHHHHHHHhhh----hcCc
Q 010899          101 LNNEGENFTKRYIKSVGEIVGDN---SVLCASTQRHKLIRSRLANL-FSLSSLSIFTKQFDQLVLENLSDWE----HKAA  172 (498)
Q Consensus       101 l~~~~~~~~~~~~~~~~~~~g~~---~l~~~~g~~~~~~R~~l~~~-f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~  172 (498)
                      +.+++..|.+++.......+|.+   +++..+|+.|+++|+++++. ++....+.+.+.+.+.+.++++.+.    +++ 
T Consensus       118 l~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-  196 (543)
T PLN02971        118 FKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSE-  196 (543)
T ss_pred             HHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-
Confidence            99988889988654444445532   36667899999999999754 5555566677777777776666552    234 


Q ss_pred             chhhHHHHHhhHHHHHHHHHccCCcch--------hHHHHHHHHHHHHHHHh-----ccCCCCchHHH-------Hhhhh
Q 010899          173 TVVVLREALKVTFKAMCKILLSLESGK--------ELEMLENDVTRVYDAML-----AFPLKLPWTKF-------YRGVK  232 (498)
Q Consensus       173 ~~d~~~~~~~~~~~~i~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~-------~~~~~  232 (498)
                      ++|+.+.+..++++++++++||.+...        ......+.+..+.....     .+..++|+..+       +....
T Consensus       197 ~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  276 (543)
T PLN02971        197 PVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRE  276 (543)
T ss_pred             ceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHH
Confidence            799999999999999999999986311        11112222333222211     01112332211       12233


Q ss_pred             HHHHHHHHHHHHHHHHHccc-----ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHH
Q 010899          233 ARKRIMRTLEKMINIRRKGL-----ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTA  307 (498)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~  307 (498)
                      ..+.+.+++.+.++++++..     ....|+++.+++..+++            ....++++++.+++.++++||+|||+
T Consensus       277 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~------------~~~~ls~~~i~~~~~~l~~AG~dTTa  344 (543)
T PLN02971        277 SSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEA------------GQPLLTADEIKPTIKELVMAAPDNPS  344 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhccc------------CCCCCCHHHHHHhHHHHheeccchHH
Confidence            44556677777777664321     12469999999753210            11248999999999999999999999


Q ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEe
Q 010899          308 SAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVI  386 (498)
Q Consensus       308 ~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~i  386 (498)
                      ++++|++++|++|||+|+|+++||+++++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|
T Consensus       345 ~tl~~~l~~La~~Pevq~kl~~EI~~v~g~--~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~I  422 (543)
T PLN02971        345 NAVEWAMAEMINKPEILHKAMEEIDRVVGK--ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHI  422 (543)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEE
Confidence            999999999999999999999999999854  3678999999999999999999999999987 8999999999999999


Q ss_pred             cCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeE
Q 010899          387 KAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKW  460 (498)
Q Consensus       387 p~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~  460 (498)
                      |||+.|.++.|++||||++|+||++|+||||+++++      .+..|+|||.|+|.|+|++||++|+++++|+||++|+|
T Consensus       423 pkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  502 (543)
T PLN02971        423 PKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKW  502 (543)
T ss_pred             CCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEE
Confidence            999999999999999999999999999999997432      24579999999999999999999999999999999999


Q ss_pred             EeecCCCCcccc--cccccCCCCcceEEeeccc
Q 010899          461 EMIDSDSSIDKW--AMFARLKSGCPIHVKSTNM  491 (498)
Q Consensus       461 ~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~  491 (498)
                      ++.+++......  .+....++++.+.+++|..
T Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (543)
T PLN02971        503 KLAGSETRVELMESSHDMFLSKPLVMVGELRLS  535 (543)
T ss_pred             EeCCCCCCcchhhhcCcccccccceeeeeecCC
Confidence            987655433331  1233355678899999844


No 9  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.5e-74  Score=568.20  Aligned_cols=474  Identities=20%  Similarity=0.325  Sum_probs=362.3

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEE
Q 010899            1 MDETLFLYGYIVFVIGIVIILIIMNTKKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFR   80 (498)
Q Consensus         1 m~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~   80 (498)
                      |+.+..+.+.+++++++.+++++.  ......+...+.||||+++|++||++.+.   ....+++.++.+++++||+||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lpPgp~~~pl~G~l~~~~---~~~~~~~~~~~~~~~~yG~i~~   75 (519)
T PLN00168          1 MDATQLLLLAALLLLPLLLLLLGK--HGGRGGKKGRRLPPGPPAVPLLGSLVWLT---NSSADVEPLLRRLIARYGPVVS   75 (519)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhh--hhccCCCCCCCCCcCCCCCcccccHHhhc---cccccHHHHHHHHHHHhCCeEE
Confidence            555666555555555444444443  22333444556799999999999987662   1123578899999999999999


Q ss_pred             eccCCcceEEEcCHHHHHHHHhhcCCccccchhhhhhhhhCCC-ccee--cccHhHHHHHH-HHHhccChhhHHhhHHHH
Q 010899           81 TNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN-SVLC--ASTQRHKLIRS-RLANLFSLSSLSIFTKQF  156 (498)
Q Consensus        81 ~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~g~~-~l~~--~~g~~~~~~R~-~l~~~f~~~~l~~~~~~~  156 (498)
                      +++|+.+.|+|+||+++++++++++..|+.++.......+|.+ +++.  .+|+.|+++|+ ++++.|+.++++.+.+.+
T Consensus        76 ~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~  155 (519)
T PLN00168         76 LRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPAR  155 (519)
T ss_pred             EEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            9999999999999999999999888888887543333344532 3443  57999999886 789999999999999999


Q ss_pred             HHHHHHHHHhhhhc---CcchhhHHHHHhhHHHHHHHHHccCCcchhH-HHHHHHHHHHHHHH---hccCCCCchH----
Q 010899          157 DQLVLENLSDWEHK---AATVVVLREALKVTFKAMCKILLSLESGKEL-EMLENDVTRVYDAM---LAFPLKLPWT----  225 (498)
Q Consensus       157 ~~~~~~~l~~~~~~---~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~p~~----  225 (498)
                      .+.++++++.+...   ...+|+...+..+++++++.++||.+.+... ..+...+..+....   ..+...+|..    
T Consensus       156 ~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~  235 (519)
T PLN00168        156 AWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL  235 (519)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh
Confidence            99999999988431   1257899999999999999999998754322 12222222111111   1111122211    


Q ss_pred             ---HHHhhhhHHHHHHHHHHHHHHHHHccc------c--------cchhHHHhhhhhhccchhhhccCCCCCCCCCCCCH
Q 010899          226 ---KFYRGVKARKRIMRTLEKMINIRRKGL------E--------THEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTD  288 (498)
Q Consensus       226 ---~~~~~~~~~~~~~~~~~~~i~~~~~~~------~--------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~  288 (498)
                         .+.+..+..+.+.+++.+.++++++..      .        ...|+++.+++....+           +.+..+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----------~~~~~lt~  304 (519)
T PLN00168        236 FRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPE-----------DGDRALTD  304 (519)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccc-----------cccCCCCH
Confidence               123344566677777888777665421      0        1357899988653211           02235999


Q ss_pred             HHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCC
Q 010899          289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIV  368 (498)
Q Consensus       289 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~  368 (498)
                      +++.+++.++++||+|||+++++|++++|++||++|+|+++||+++.+.. .+.++.+++++||||+|||+||||++|++
T Consensus       305 ~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-~~~~~~~~~~~lpyl~avi~EtlRl~p~~  383 (519)
T PLN00168        305 DEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDD-QEEVSEEDVHKMPYLKAVVLEGLRKHPPA  383 (519)
T ss_pred             HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCCHHHhhCChHHHHHHHHHhhcCCCC
Confidence            99999999999999999999999999999999999999999999998532 25689999999999999999999999999


Q ss_pred             Cc-CcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC---------CCCccccCCCCccCcc
Q 010899          369 AW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES---------KPYGSIPFSMGGRACL  438 (498)
Q Consensus       369 ~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~---------~~~~~~~Fg~G~r~C~  438 (498)
                      +. ++|.+.+|++++||.|||||.|.++++++||||++|+||++|+||||++...         ++..|+|||.|+|.||
T Consensus       384 ~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~  463 (519)
T PLN00168        384 HFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICA  463 (519)
T ss_pred             cccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCC
Confidence            86 6899999999999999999999999999999999999999999999996321         2357999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcCeEEeecCCC-Cccc-ccccccCCCCcceEEeeccc
Q 010899          439 GMHMAKAMMLVFLHRLITTYKWEMIDSDS-SIDK-WAMFARLKSGCPIHVKSTNM  491 (498)
Q Consensus       439 G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~-~~~~~~~~~~~~v~~~~r~~  491 (498)
                      |++||++|+++++++||++|+|++.++.+ +... ...+..++++++|++++|++
T Consensus       464 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        464 GLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             cHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            99999999999999999999999876432 2211 12346678899999999875


No 10 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.9e-74  Score=568.96  Aligned_cols=440  Identities=21%  Similarity=0.264  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCcccccchHHHHHhcc-------------CcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHh
Q 010899           36 VSIPPGSEGLPLIGETLQFMAAINS-------------SQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN  102 (498)
Q Consensus        36 ~~~pPgp~~~P~~G~~~~~~~~~~~-------------~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~  102 (498)
                      .+.||||+++|++||++++.....+             ..+....+.+|+++|||+|++++|+.++|+++||+++++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            3458999999999999888531110             022334567899999999999999999999999999999998


Q ss_pred             hcCCccccchhh---hhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHhhhh----cCcchh
Q 010899          103 NEGENFTKRYIK---SVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEH----KAATVV  175 (498)
Q Consensus       103 ~~~~~~~~~~~~---~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~~~----~~~~~d  175 (498)
                      ++. .+..+...   .....+| .+++..+|+.|+++|+++++.|+.++++.+.+.+.+.+.++++.+..    ++..+|
T Consensus       121 ~~~-~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  198 (516)
T PLN02290        121 KYN-TVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE  198 (516)
T ss_pred             cCC-CCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            763 34444321   1223345 57888899999999999999999999999999999999999998842    223789


Q ss_pred             hHHHHHhhHHHHHHHHHccCCcchh--HHHHHHHHHHHHHHHh---ccCC--CCchHHHHhhhhHHHHHHHHHHHHHHHH
Q 010899          176 VLREALKVTFKAMCKILLSLESGKE--LEMLENDVTRVYDAML---AFPL--KLPWTKFYRGVKARKRIMRTLEKMINIR  248 (498)
Q Consensus       176 ~~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~---~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~  248 (498)
                      +.+.+..++++++++++||.+....  .....+.+........   .++.  ++|....++.....+.+.+++.+.++++
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~  278 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSR  278 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999874321  1112122222111111   1111  1222222333445566777778888776


Q ss_pred             Hccc------ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHH
Q 010899          249 RKGL------ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEE  322 (498)
Q Consensus       249 ~~~~------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~  322 (498)
                      ++..      ....|+++.+++......          +++..++++++.+++.++++||+|||+++++|++++|++||+
T Consensus       279 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~----------~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~  348 (516)
T PLN02290        279 RDCVEIGRSSSYGDDLLGMLLNEMEKKR----------SNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPT  348 (516)
T ss_pred             HHHhhcccCCCCCCCHHHHHHHhccccC----------CCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHH
Confidence            6432      124689999887543110          022347899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCC
Q 010899          323 VLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLD  402 (498)
Q Consensus       323 ~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d  402 (498)
                      +|+|+++|++++++.   ..++.+++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|.++.|++|||
T Consensus       349 vq~kl~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd  425 (516)
T PLN02290        349 WQDKVRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHS  425 (516)
T ss_pred             HHHHHHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCC
Confidence            999999999999854   47899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCC-CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCC
Q 010899          403 STVH-SNPYKFNPSRFDGDES-KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKS  480 (498)
Q Consensus       403 ~~~~-~~p~~F~PeR~l~~~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  480 (498)
                      |++| +||++|+||||++.+. ....++|||.|+|.|+|++||++|+++++++||++|+|++.++.........+..|++
T Consensus       426 p~~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~  505 (516)
T PLN02290        426 EELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKY  505 (516)
T ss_pred             hhhhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCC
Confidence            9999 8999999999996432 3457999999999999999999999999999999999998765332222345678999


Q ss_pred             CcceEEeecc
Q 010899          481 GCPIHVKSTN  490 (498)
Q Consensus       481 ~~~v~~~~r~  490 (498)
                      +++|++++|+
T Consensus       506 ~~~~~~~~~~  515 (516)
T PLN02290        506 GVQVCLKPLN  515 (516)
T ss_pred             CCeEEEEeCC
Confidence            9999999986


No 11 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.5e-75  Score=564.37  Aligned_cols=434  Identities=31%  Similarity=0.469  Sum_probs=349.1

Q ss_pred             CCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc--ch
Q 010899           35 TVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK--RY  112 (498)
Q Consensus        35 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~--~~  112 (498)
                      ....||||.++|++|++.++....   .++..++.++..+||++|+.|+||.+.|+++||+.+++|+.++...+.+  .+
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~  109 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPL---EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDY  109 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcch---hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhH
Confidence            456799999999999999996322   4678888999999999999999999999999999999999654444433  35


Q ss_pred             hhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHhh--hhcCcchhhHHHHHhhHHHHHHH
Q 010899          113 IKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDW--EHKAATVVVLREALKVTFKAMCK  190 (498)
Q Consensus       113 ~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~--~~~~~~~d~~~~~~~~~~~~i~~  190 (498)
                      ...+..++|. |++.++|+.|+.+|+++++.|+.+.++.+...+.+....++..+  ...+..+|+.+.+.++++|+++.
T Consensus       110 ~~~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  110 PESLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            5567788897 88888899999999999999999999999988887777766555  22231399999999999999999


Q ss_pred             HHccCCc-chh---HHHHHHHHHHHHHHHhccCCCCc-hHH-------HHhhhhHHHHHHHHHHHHHHHHHccc------
Q 010899          191 ILLSLES-GKE---LEMLENDVTRVYDAMLAFPLKLP-WTK-------FYRGVKARKRIMRTLEKMINIRRKGL------  252 (498)
Q Consensus       191 ~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~p-~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~------  252 (498)
                      ++||... +.+   .....+.+..... ....+...| +..       .++..++.+.+.+.+++.|+++++..      
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTE-LISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHH-HHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999332 212   2223333332222 222233333 222       34455688889999999999888542      


Q ss_pred             --ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHH
Q 010899          253 --ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE  330 (498)
Q Consensus       253 --~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~E  330 (498)
                        ....|+++.+....               + ..+++++|.+++.++++||+|||+++++|+++.|+.||++|+|+++|
T Consensus       268 ~~~~~~d~L~~~~~~~---------------~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eE  331 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEE---------------D-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREE  331 (497)
T ss_pred             ccchhhhHHHHHHHhc---------------c-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence              22456777532221               1 46999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccc-cCeEecCCcEEeeccccccCCCCCCC-C
Q 010899          331 HFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI-EGYVIKAGWSVNIDAKSIHLDSTVHS-N  408 (498)
Q Consensus       331 i~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-~  408 (498)
                      ++++++.... ..+..+.++|+||++||+|||||+||+|.+.|.+.+|+++ +||.||||+.|.++++++|||+++|+ |
T Consensus       332 i~~i~~~~~~-~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~d  410 (497)
T KOG0157|consen  332 VDEILGNRDD-KWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGED  410 (497)
T ss_pred             HHHHhCCCCC-CCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCC
Confidence            9999854222 2333333479999999999999999999999999999999 58999999999999999999999996 9


Q ss_pred             CCCCCCCCCCCCCC----CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcce
Q 010899          409 PYKFNPSRFDGDES----KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPI  484 (498)
Q Consensus       409 p~~F~PeR~l~~~~----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v  484 (498)
                      |++|+||||++++.    ++.+|+|||+|+|.|+|++||++|+|+++++|+++|+|++..+.........+..|..|++|
T Consensus       411 p~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  411 PEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKV  490 (497)
T ss_pred             hhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEE
Confidence            99999999996432    36899999999999999999999999999999999999988876422334566899999999


Q ss_pred             EEeecc
Q 010899          485 HVKSTN  490 (498)
Q Consensus       485 ~~~~r~  490 (498)
                      ++++|.
T Consensus       491 ~~~~r~  496 (497)
T KOG0157|consen  491 KLRPRG  496 (497)
T ss_pred             EEEeCC
Confidence            999986


No 12 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=7.2e-74  Score=564.65  Aligned_cols=444  Identities=23%  Similarity=0.368  Sum_probs=351.0

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      ..+++.+.||||.++|++||++++      ..+++.++.+++++||+||++++|+.++|+++||+++++++.++...|.+
T Consensus        28 ~~~~~~~~pPgp~~~P~iG~~~~~------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~  101 (517)
T PLN02687         28 SGKHKRPLPPGPRGWPVLGNLPQL------GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSN  101 (517)
T ss_pred             CCCCCCCCCccCCCCCccccHHhc------CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhc
Confidence            334455679999999999999887      44588899999999999999999999999999999999999988788888


Q ss_pred             chhhhhhhhh---CCCcceecccHhHHHHHHHHH-hccChhhHHhhHHHHHHHHHHHHHhhhh--cCcchhhHHHHHhhH
Q 010899          111 RYIKSVGEIV---GDNSVLCASTQRHKLIRSRLA-NLFSLSSLSIFTKQFDQLVLENLSDWEH--KAATVVVLREALKVT  184 (498)
Q Consensus       111 ~~~~~~~~~~---g~~~l~~~~g~~~~~~R~~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~--~~~~~d~~~~~~~~~  184 (498)
                      ++.......+   +.++++..+|+.|+++|+.++ +.|+.++++++.+.+.+.+.++++.+..  .+.++|+.+++..++
T Consensus       102 r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t  181 (517)
T PLN02687        102 RPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCT  181 (517)
T ss_pred             CCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHH
Confidence            7543222222   234456667999999999998 8999999999999999999999988842  223799999999999


Q ss_pred             HHHHHHHHccCCcc-----hhHHHHHHHHHHHHHHHhccC--CCCchHH-------HHhhhhHHHHHHHHHHHHHHHHHc
Q 010899          185 FKAMCKILLSLESG-----KELEMLENDVTRVYDAMLAFP--LKLPWTK-------FYRGVKARKRIMRTLEKMINIRRK  250 (498)
Q Consensus       185 ~~~i~~~~fG~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~p~~~-------~~~~~~~~~~~~~~~~~~i~~~~~  250 (498)
                      +++++..+||.+..     .....+.+.+..+........  ..+|+..       ..+..+..+.+.+.+.+.++++++
T Consensus       182 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~  261 (517)
T PLN02687        182 TNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKA  261 (517)
T ss_pred             HHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998732     122334444443333221111  1223211       223444566677788888888765


Q ss_pred             cc----ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHH
Q 010899          251 GL----ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDK  326 (498)
Q Consensus       251 ~~----~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~k  326 (498)
                      ..    ....|+++.+++....+..        .+++..++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~~~--------~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~k  333 (517)
T PLN02687        262 AGQTGSEEHKDLLSTLLALKREQQA--------DGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKK  333 (517)
T ss_pred             hccccCcccccHHHHHHHhhccccc--------cccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHH
Confidence            42    2346899999976432100        00233589999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCC
Q 010899          327 LKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV  405 (498)
Q Consensus       327 l~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  405 (498)
                      +++|++++.+.  ++.++.+++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++
T Consensus       334 l~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~  411 (517)
T PLN02687        334 AQEELDAVVGR--DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQ  411 (517)
T ss_pred             HHHHHHHHcCC--CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCccc
Confidence            99999998854  2568999999999999999999999999996 79999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC--------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCC--Cccc---c
Q 010899          406 HSNPYKFNPSRFDGDES--------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDS--SIDK---W  472 (498)
Q Consensus       406 ~~~p~~F~PeR~l~~~~--------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~---~  472 (498)
                      |+||++|+||||++...        .+..++|||.|+|.|+|++||++|+++++|+||++|+|++.++..  .+..   .
T Consensus       412 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  491 (517)
T PLN02687        412 WPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAY  491 (517)
T ss_pred             CCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccccc
Confidence            99999999999997421        234789999999999999999999999999999999999876532  2221   1


Q ss_pred             cccccCCCCcceEEeecc
Q 010899          473 AMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       473 ~~~~~~~~~~~v~~~~r~  490 (498)
                      .....+..++.+++++|.
T Consensus       492 ~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        492 GLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             ceeeecCCCeEEeeccCC
Confidence            222345556777777773


No 13 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=9.8e-74  Score=560.10  Aligned_cols=441  Identities=22%  Similarity=0.334  Sum_probs=349.9

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccch
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRY  112 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~  112 (498)
                      ..+.+.||||+++|++||++.+      ..+++.++.+++++||+||++++|+.++|+|+||+++++++.++...|++++
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~  100 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLL------GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRP  100 (504)
T ss_pred             cccCCCcccCCCCCeeechhhc------CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCC
Confidence            3344679999999999998776      3457889999999999999999999999999999999999998877888875


Q ss_pred             hhhh-h-hhhC-CCcceecccHhHHHHHHHHHh-ccChhhHHhhHHHHHHHHHHHHHhhh----hcCcchhhHHHHHhhH
Q 010899          113 IKSV-G-EIVG-DNSVLCASTQRHKLIRSRLAN-LFSLSSLSIFTKQFDQLVLENLSDWE----HKAATVVVLREALKVT  184 (498)
Q Consensus       113 ~~~~-~-~~~g-~~~l~~~~g~~~~~~R~~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~~d~~~~~~~~~  184 (498)
                      .... . ...| ..+++..+|+.|+++|+.+++ .|+.++++.+.+.+.+.+.++++.+.    +++ .+|+.+++..++
T Consensus       101 ~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~  179 (504)
T PLN00110        101 PNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGE-PVVVPEMLTFSM  179 (504)
T ss_pred             CccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCC-cEeHHHHHHHHH
Confidence            4321 1 2233 245666789999999999985 79999999999999888888877762    344 789999999999


Q ss_pred             HHHHHHHHccCCc----chhHHHHHHHHHHHHHHHhcc--CCCCchHH------H-HhhhhHHHHHHHHHHHHHHHHHcc
Q 010899          185 FKAMCKILLSLES----GKELEMLENDVTRVYDAMLAF--PLKLPWTK------F-YRGVKARKRIMRTLEKMINIRRKG  251 (498)
Q Consensus       185 ~~~i~~~~fG~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~------~-~~~~~~~~~~~~~~~~~i~~~~~~  251 (498)
                      ++++++++||.+.    +.....+.+.+..........  ..++|...      + ++..+..+.+.+++.+.++++++.
T Consensus       180 ~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        180 ANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999863    112233444444333221111  11222211      1 233344566667777777766543


Q ss_pred             c---ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHH
Q 010899          252 L---ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLK  328 (498)
Q Consensus       252 ~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~  328 (498)
                      .   ....|+++.+++....            +++..++++++.+++..+++||+|||+++++|++++|++||++|+|++
T Consensus       260 ~~~~~~~~d~l~~ll~~~~~------------~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~  327 (504)
T PLN00110        260 AHERKGNPDFLDVVMANQEN------------STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAH  327 (504)
T ss_pred             ccccccCCChhhHHhhcccc------------cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence            2   2346899999865321            123468999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCCCC
Q 010899          329 AEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHS  407 (498)
Q Consensus       329 ~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~  407 (498)
                      +|++++.+.  .+.++.+++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|+
T Consensus       328 ~Ei~~~~~~--~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~  405 (504)
T PLN00110        328 EEMDQVIGR--NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWE  405 (504)
T ss_pred             HHHHHHhCC--CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcC
Confidence            999999854  2568999999999999999999999999997 7999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC-------CCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCC-cc-cccccccC
Q 010899          408 NPYKFNPSRFDGDESK-------PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSS-ID-KWAMFARL  478 (498)
Q Consensus       408 ~p~~F~PeR~l~~~~~-------~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~-~~-~~~~~~~~  478 (498)
                      ||++|+||||++.+..       ...++|||.|+|.|+|++||++|+++++++|+++|+|++.++.+. .. ....+..|
T Consensus       406 dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  485 (504)
T PLN00110        406 NPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQK  485 (504)
T ss_pred             CcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccccccc
Confidence            9999999999964221       247999999999999999999999999999999999998765431 11 22345678


Q ss_pred             CCCcceEEeecccchh
Q 010899          479 KSGCPIHVKSTNMKDK  494 (498)
Q Consensus       479 ~~~~~v~~~~r~~~~~  494 (498)
                      ++++.+++++|..++.
T Consensus       486 ~~~~~~~~~~r~~~~~  501 (504)
T PLN00110        486 AVPLSAMVTPRLHQSA  501 (504)
T ss_pred             CCCceEeeccCCCchh
Confidence            8999999999975543


No 14 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.3e-73  Score=562.60  Aligned_cols=443  Identities=22%  Similarity=0.283  Sum_probs=339.6

Q ss_pred             CCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhh
Q 010899           35 TVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIK  114 (498)
Q Consensus        35 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~  114 (498)
                      +.+.||||+++|++||++++      ....+.++.+++++||+||++++|+.++|+|+||+++++++.+++..|+.++..
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMM------DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhc------CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            35689999999999998776      334567888999999999999999999999999999999999887778776433


Q ss_pred             hh-hhhhC--CCcceecccHhHHHHHHH-HHhccChhhHHhhHHHHHHHHHHHHHhhh--hcCcchhhHHHHHhhHHHHH
Q 010899          115 SV-GEIVG--DNSVLCASTQRHKLIRSR-LANLFSLSSLSIFTKQFDQLVLENLSDWE--HKAATVVVLREALKVTFKAM  188 (498)
Q Consensus       115 ~~-~~~~g--~~~l~~~~g~~~~~~R~~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~~d~~~~~~~~~~~~i  188 (498)
                      .. ....+  ..+++..+|+.|+++|+. +.+.|+.+.++.+.+.+ +++..+++.+.  .++ ++|+.+++..++++++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~-~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGK-PVNIGELIFTLTRNIT  185 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCC-cEeHHHHHHHHHHHHH
Confidence            21 22222  245667789999999998 57899999998888754 57888888883  344 7999999999999999


Q ss_pred             HHHHccCCcchhHHHHHHHHHHHHHHHhcc--CCCCchH-------HHHhhhhHHHHHHHHHHHHHHHHHccc-------
Q 010899          189 CKILLSLESGKELEMLENDVTRVYDAMLAF--PLKLPWT-------KFYRGVKARKRIMRTLEKMINIRRKGL-------  252 (498)
Q Consensus       189 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~-------  252 (498)
                      ++++||...+.....+.+.+..+...+...  ...+|+.       .+++..+.++.+.+++.+.++++.+..       
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        186 YRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             HhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            999999875443334444444333322111  1122221       123444555666666666666543211       


Q ss_pred             ---ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHH
Q 010899          253 ---ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKA  329 (498)
Q Consensus       253 ---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~  329 (498)
                         ....|+++.+++...+....  ......+....++++++.+++..+++||+|||+.+++|++++|++||++|+|+++
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~--~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  343 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKV--NESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQ  343 (516)
T ss_pred             ccccccccHHHHHHHhhhccccc--cccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence               12358999998754321000  0000000123589999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCC
Q 010899          330 EHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP  409 (498)
Q Consensus       330 Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p  409 (498)
                      |++++++.  .+.++.+++++||||+|||+||||++|+++...|.+.+|++++||.|||||.|.++.|++||||++|+||
T Consensus       344 Ei~~v~~~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP  421 (516)
T PLN02183        344 ELADVVGL--NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDP  421 (516)
T ss_pred             HHHHHcCC--CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCc
Confidence            99999853  2568999999999999999999999999999889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC-----CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCC--Cccccc--cccc-CC
Q 010899          410 YKFNPSRFDGDES-----KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDS--SIDKWA--MFAR-LK  479 (498)
Q Consensus       410 ~~F~PeR~l~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~--~~~~-~~  479 (498)
                      ++|+||||++++.     +...|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++..  ......  +... +.
T Consensus       422 ~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (516)
T PLN02183        422 DTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRA  501 (516)
T ss_pred             cccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccC
Confidence            9999999997432     245799999999999999999999999999999999999876532  122111  2222 33


Q ss_pred             CCcceEEeec
Q 010899          480 SGCPIHVKST  489 (498)
Q Consensus       480 ~~~~v~~~~r  489 (498)
                      .++.+.+++|
T Consensus       502 ~~~~~~~~~r  511 (516)
T PLN02183        502 TRLVAVPTYR  511 (516)
T ss_pred             CCcEEEeecC
Confidence            4566666666


No 15 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.5e-73  Score=560.43  Aligned_cols=441  Identities=23%  Similarity=0.342  Sum_probs=346.1

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      .++++.+.||||+++|++||++++.     ..+++.++.+++++||++|++++|+.++|+++||+++++++.++...|.+
T Consensus        22 ~~~~~~~~pPgp~~~P~iG~~~~~~-----~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~   96 (499)
T PLN03234         22 TTKKSLRLPPGPKGLPIIGNLHQME-----KFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTA   96 (499)
T ss_pred             hcCCCCCCCcCCCCCCeeccHHhcC-----CCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccC
Confidence            3445567899999999999998873     23577889999999999999999999999999999999999988878887


Q ss_pred             chhhhhhhh---hCCCcceecccHhHHHHHHHH-HhccChhhHHhhHHHHHHHHHHHHHhhh---hcCcchhhHHHHHhh
Q 010899          111 RYIKSVGEI---VGDNSVLCASTQRHKLIRSRL-ANLFSLSSLSIFTKQFDQLVLENLSDWE---HKAATVVVLREALKV  183 (498)
Q Consensus       111 ~~~~~~~~~---~g~~~l~~~~g~~~~~~R~~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~d~~~~~~~~  183 (498)
                      ++.......   .+....+...++.|+++|+.+ .+.|+++++..+.+.+.+.++++++.+.   ++++.+|+.+.+..+
T Consensus        97 r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~  176 (499)
T PLN03234         97 RPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSF  176 (499)
T ss_pred             CCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHH
Confidence            754322111   122222334578999999984 6999999999999999999999999883   223389999999999


Q ss_pred             HHHHHHHHHccCCcchh---HHHHHHHHHHHHHHHhc--cCCCCchH--------HHHhhhhHHHHHHHHHHHHHHHHHc
Q 010899          184 TFKAMCKILLSLESGKE---LEMLENDVTRVYDAMLA--FPLKLPWT--------KFYRGVKARKRIMRTLEKMINIRRK  250 (498)
Q Consensus       184 ~~~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~~~  250 (498)
                      +++++++++||.+.+..   ...+.+.+.........  +...+|+.        ..++..++.+.+.+.+.+.++++.+
T Consensus       177 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~  256 (499)
T PLN03234        177 TNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLD  256 (499)
T ss_pred             HHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999875432   22233322222211111  01112221        1235566777888888888887654


Q ss_pred             cc---ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHH
Q 010899          251 GL---ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKL  327 (498)
Q Consensus       251 ~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl  327 (498)
                      ..   ....|+++.+++..+++           +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       257 ~~~~~~~~~d~l~~l~~~~~~~-----------~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl  325 (499)
T PLN03234        257 PNRPKQETESFIDLLMQIYKDQ-----------PFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKA  325 (499)
T ss_pred             hcccCCCcccHHHHHHHHhhcc-----------CcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence            32   23468888887654210           01235899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCCC
Q 010899          328 KAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVH  406 (498)
Q Consensus       328 ~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  406 (498)
                      ++|++++.+.  .+.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.|++||||++|
T Consensus       326 ~~Ei~~~~~~--~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~  403 (499)
T PLN03234        326 QDEVRNVIGD--KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAW  403 (499)
T ss_pred             HHHHHHHhCC--CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccc
Confidence            9999999854  3568999999999999999999999999997 589999999999999999999999999999999999


Q ss_pred             -CCCCCCCCCCCCCCCC------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCC--CCccc--c-cc
Q 010899          407 -SNPYKFNPSRFDGDES------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSD--SSIDK--W-AM  474 (498)
Q Consensus       407 -~~p~~F~PeR~l~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~~~--~-~~  474 (498)
                       +||++|+||||++++.      .+..++|||+|+|.|+|+++|++|+++++|+|+++|+|++.++.  +.+..  . ..
T Consensus       404 ~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  483 (499)
T PLN03234        404 GDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGL  483 (499)
T ss_pred             cCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccc
Confidence             8999999999997532      25579999999999999999999999999999999999987753  22221  1 22


Q ss_pred             cccCCCCcceEEeec
Q 010899          475 FARLKSGCPIHVKST  489 (498)
Q Consensus       475 ~~~~~~~~~v~~~~r  489 (498)
                      ...|++.+.+.+++|
T Consensus       484 ~~~~~~~~~~~~~~~  498 (499)
T PLN03234        484 AMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccCCCeEEEeecC
Confidence            234777777776654


No 16 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=9.1e-73  Score=546.79  Aligned_cols=437  Identities=32%  Similarity=0.548  Sum_probs=351.4

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccch
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRY  112 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~  112 (498)
                      ..+.+.||||.++|++||++++..... ..+++.++.+++++||+||++++++.++|+|+||+++++++.++...|.+++
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~-~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYK-TENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcc-cCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            444567999999999999988742111 2458889999999999999999999999999999999999999888887665


Q ss_pred             hhhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHH-HHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHHHHHH
Q 010899          113 IKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTK-QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKI  191 (498)
Q Consensus       113 ~~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~  191 (498)
                      ......++|+.+++..+|+.|+++|+++.+.++.+.++.+.. .+.+.+...++.|.  + .+++.+.+..+++++++++
T Consensus       105 ~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~v~~~~~~~~~t~~vi~~~  181 (472)
T PLN02987        105 PGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS--S-RVLLMEEAKKITFELTVKQ  181 (472)
T ss_pred             cHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc--c-ceehHHHHHHHHHHHHHHH
Confidence            444456677667888899999999999876445455555432 23444445555553  3 7889999999999999999


Q ss_pred             HccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHccc----ccchhHHHhhhhhhc
Q 010899          192 LLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGL----ETHEDFLQCLLAEDA  267 (498)
Q Consensus       192 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~ll~~~~  267 (498)
                      +||.+.......+.+.+......+...+..+....+++..++++++.+.+.+.++++++..    ....|+++.+++.. 
T Consensus       182 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~-  260 (472)
T PLN02987        182 LMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASD-  260 (472)
T ss_pred             HcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcC-
Confidence            9998754333334444443333332222211122356777788899999999998887642    13468999988642 


Q ss_pred             cchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhc-cCCCCChh
Q 010899          268 VDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERT-KKSLLTLE  346 (498)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~  346 (498)
                                      .+++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.+.+.. ....++.+
T Consensus       261 ----------------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~  324 (472)
T PLN02987        261 ----------------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWS  324 (472)
T ss_pred             ----------------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHH
Confidence                            1489999999999999999999999999999999999999999999999987431 23457899


Q ss_pred             hhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC---C
Q 010899          347 DLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES---K  423 (498)
Q Consensus       347 ~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~---~  423 (498)
                      ++.++||++||++|+||++|+++.++|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||++.+.   .
T Consensus       325 ~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~  404 (472)
T PLN02987        325 DYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVP  404 (472)
T ss_pred             HHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCC
Confidence            9999999999999999999999988899999999999999999999999999999999999999999999997532   2


Q ss_pred             CCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCCCCcceEEeecccc
Q 010899          424 PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLKSGCPIHVKSTNMK  492 (498)
Q Consensus       424 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  492 (498)
                      ...++|||+|+|.|||++||++|++++++.|+++|+|++.+++. +.... +..|.+++++++++|+..
T Consensus       405 ~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~-~~~p~~~~~~~~~~r~~~  471 (472)
T PLN02987        405 SNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK-LVFFP-TTRTQKRYPINVKRRDVA  471 (472)
T ss_pred             CcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc-eeecc-cccCCCCceEEEEecccC
Confidence            46799999999999999999999999999999999999876553 33323 578999999999999764


No 17 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.5e-73  Score=558.05  Aligned_cols=431  Identities=20%  Similarity=0.263  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhh
Q 010899           35 TVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIK  114 (498)
Q Consensus        35 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~  114 (498)
                      ....+|||.++|++||++.+      ..+++.++.+++++|||||++++|+.++|+++||+++++++.++...|.++...
T Consensus        27 ~~~~~pgp~~~p~~G~~~~~------~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~  100 (482)
T PTZ00404         27 HKNELKGPIPIPILGNLHQL------GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKI  100 (482)
T ss_pred             cCCCCCCCCCCCeeccHhhh------cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCc
Confidence            35678999999999999887      346889999999999999999999999999999999999998776667665322


Q ss_pred             hh-hhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHhhh---hcCcchhhHHHHHhhHHHHHHH
Q 010899          115 SV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWE---HKAATVVVLREALKVTFKAMCK  190 (498)
Q Consensus       115 ~~-~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~d~~~~~~~~~~~~i~~  190 (498)
                      .. .....+.+++..+|+.|+++|+++++.|+.++++++.+.+.+.+.++++.+.   +.+..+|+..++..++++++++
T Consensus       101 ~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        101 PSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             ceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            11 1111235788889999999999999999999999999999999999998873   2233799999999999999999


Q ss_pred             HHccCCcchh-------HHHHHHHHHHHHHHHhccC--CCCch-----HHH-HhhhhHHHHHHHHHHHHHHHHHccc--c
Q 010899          191 ILLSLESGKE-------LEMLENDVTRVYDAMLAFP--LKLPW-----TKF-YRGVKARKRIMRTLEKMINIRRKGL--E  253 (498)
Q Consensus       191 ~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~p~-----~~~-~~~~~~~~~~~~~~~~~i~~~~~~~--~  253 (498)
                      ++||.+.+..       ...+.+.+..++..+....  ..+++     ..+ ....+..+.+.+++.+.++++++..  .
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  260 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE  260 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            9999874321       1233444444333221110  01111     001 1123345566677777776655432  2


Q ss_pred             cchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhh
Q 010899          254 THEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFP  333 (498)
Q Consensus       254 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~  333 (498)
                      ...|+++.+++....              ....+.+++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       261 ~~~dll~~ll~~~~~--------------~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~  326 (482)
T PTZ00404        261 VPRDLLDLLIKEYGT--------------NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKS  326 (482)
T ss_pred             CcccHHHHHHHHhcc--------------CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence            356899999876421              011223458899999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccc-cCeEecCCcEEeeccccccCCCCCCCCCCC
Q 010899          334 LMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEI-EGYVIKAGWSVNIDAKSIHLDSTVHSNPYK  411 (498)
Q Consensus       334 ~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  411 (498)
                      +++..  ..++.+++++||||+|||+||||++|+++. ++|.+.+|+++ +||.||||+.|.++.+++||||++||||++
T Consensus       327 v~~~~--~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~  404 (482)
T PTZ00404        327 TVNGR--NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQ  404 (482)
T ss_pred             HhcCC--CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccc
Confidence            98642  467999999999999999999999999996 79999999999 999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCC-cc-cccccccCCCCcceEEeec
Q 010899          412 FNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSS-ID-KWAMFARLKSGCPIHVKST  489 (498)
Q Consensus       412 F~PeR~l~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~-~~-~~~~~~~~~~~~~v~~~~r  489 (498)
                      |+||||++. ..+..|+|||.|+|.|||++||++|+++++++|+++|+|++.++.+. .. ....+.. +++++|.+++|
T Consensus       405 F~PeRwl~~-~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        405 FDPSRFLNP-DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cCccccCCC-CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            999999974 35678999999999999999999999999999999999998655432 11 1223344 56799999876


No 18 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1e-72  Score=556.73  Aligned_cols=438  Identities=20%  Similarity=0.317  Sum_probs=335.9

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      ..+++.+.||||+++|++||++++.     ....+..+.+++++||+||++++|++++|+|+||+.+++++.+++..|.+
T Consensus        24 ~~~~~~~~pPgp~~~p~~g~l~~~~-----~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~   98 (503)
T PLN02394         24 LRGKKLKLPPGPAAVPIFGNWLQVG-----DDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGS   98 (503)
T ss_pred             HhcCcCCCCcCCCCCCeeeeHHhcC-----CCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccC
Confidence            3556678999999999999998772     23357789999999999999999999999999999999999888777876


Q ss_pred             chhhhh-hhhhC--CCcceecccHhHHHHHHHHH-hccChhhHHhhHHHHHHHHHHHHHhhhhc----CcchhhHHHHHh
Q 010899          111 RYIKSV-GEIVG--DNSVLCASTQRHKLIRSRLA-NLFSLSSLSIFTKQFDQLVLENLSDWEHK----AATVVVLREALK  182 (498)
Q Consensus       111 ~~~~~~-~~~~g--~~~l~~~~g~~~~~~R~~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~----~~~~d~~~~~~~  182 (498)
                      ++.... ..+.|  .++++..+|+.|+++|+.+. +.|+.+.++.+.+.+.+.++++++.+...    +..+++...+..
T Consensus        99 r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~  178 (503)
T PLN02394         99 RTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQL  178 (503)
T ss_pred             CCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHH
Confidence            643222 22223  23466678999999999996 88999999999999999999999888321    225899999999


Q ss_pred             hHHHHHHHHHccCCcchh----HHHHHHHHHHHHHHHhc----cCCCCchHH-----HHh-hhhHHHHHHHHH-HHHHHH
Q 010899          183 VTFKAMCKILLSLESGKE----LEMLENDVTRVYDAMLA----FPLKLPWTK-----FYR-GVKARKRIMRTL-EKMINI  247 (498)
Q Consensus       183 ~~~~~i~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~p~~~-----~~~-~~~~~~~~~~~~-~~~i~~  247 (498)
                      +++|++++++||.+.+..    ...+.............    ....+|+..     +.+ ...........+ +..++.
T Consensus       179 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (503)
T PLN02394        179 MMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDE  258 (503)
T ss_pred             HHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999874321    11111111111111110    011122211     111 111111112222 223444


Q ss_pred             HHcc-------cccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhC
Q 010899          248 RRKG-------LETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSEN  320 (498)
Q Consensus       248 ~~~~-------~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  320 (498)
                      +++.       .+...|+++.+++...               ...++++++..++..+++||+|||+++++|++++|++|
T Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~---------------~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~  323 (503)
T PLN02394        259 RKKLMSAKGMDKEGLKCAIDHILEAQK---------------KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNH  323 (503)
T ss_pred             HHHHhhhccCCcchhhhHHHHHHhccc---------------cCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcC
Confidence            4321       1234688999986542               12488999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccc
Q 010899          321 EEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSI  399 (498)
Q Consensus       321 P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~  399 (498)
                      |++|+|+++|++++.+.  ++.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|.++.|.+
T Consensus       324 P~vq~kl~~Ei~~v~~~--~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~  401 (503)
T PLN02394        324 PEIQKKLRDELDTVLGP--GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWL  401 (503)
T ss_pred             HHHHHHHHHHHHHHhCC--CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHH
Confidence            99999999999999854  2568899999999999999999999999997 58999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCC------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCccc--
Q 010899          400 HLDSTVHSNPYKFNPSRFDGDES------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDK--  471 (498)
Q Consensus       400 ~~d~~~~~~p~~F~PeR~l~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~--  471 (498)
                      ||||++|+||++|+||||++.++      ....++|||.|+|.|+|++||++|+++++|+|+++|+|++.++.+.++.  
T Consensus       402 ~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  481 (503)
T PLN02394        402 ANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSE  481 (503)
T ss_pred             hCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCcccc
Confidence            99999999999999999996432      2457999999999999999999999999999999999998766532222  


Q ss_pred             -c-cccccCCCCcceEEeecc
Q 010899          472 -W-AMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       472 -~-~~~~~~~~~~~v~~~~r~  490 (498)
                       . .+....++++.|++.+|.
T Consensus       482 ~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        482 KGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             ccCceeeccCCCceEEeecCC
Confidence             1 233436678999999885


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.3e-72  Score=554.08  Aligned_cols=439  Identities=21%  Similarity=0.273  Sum_probs=346.4

Q ss_pred             cCCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           31 RGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        31 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      +..++.+.||||.++|++||++++      ..+++.++.+++++||++|++++++.++|+++||+++++++.++...|++
T Consensus        26 ~~~~~~~~ppgp~~~pl~G~~~~~------~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~   99 (514)
T PLN03112         26 SMRKSLRLPPGPPRWPIVGNLLQL------GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFAS   99 (514)
T ss_pred             cccCCCCCccCCCCCCeeeeHHhc------CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCccccc
Confidence            345556789999999999999887      45578899999999999999999999999999999999999888888887


Q ss_pred             chhhhh--hhhhCCC-cceecccHhHHHHHHHH-HhccChhhHHhhHHHHHHHHHHHHHhhh----hcCcchhhHHHHHh
Q 010899          111 RYIKSV--GEIVGDN-SVLCASTQRHKLIRSRL-ANLFSLSSLSIFTKQFDQLVLENLSDWE----HKAATVVVLREALK  182 (498)
Q Consensus       111 ~~~~~~--~~~~g~~-~l~~~~g~~~~~~R~~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~~d~~~~~~~  182 (498)
                      ++....  ...+|.+ +++..+|+.|+++|+.+ .+.|+.++++.+.+.+.+.++++++.+.    .++ .+|+...+..
T Consensus       100 ~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~-~vd~~~~~~~  178 (514)
T PLN03112        100 RPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGK-PVNLREVLGA  178 (514)
T ss_pred             CCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCC-eeeHHHHHHH
Confidence            644321  1223433 34556899999999995 5689999999999999999998887652    234 7999999999


Q ss_pred             hHHHHHHHHHccCCcc-------hhHHHHHHHHHHHHHHHhc--cCCCCchH-------HHHhhhhHHHHHHHHHHHHHH
Q 010899          183 VTFKAMCKILLSLESG-------KELEMLENDVTRVYDAMLA--FPLKLPWT-------KFYRGVKARKRIMRTLEKMIN  246 (498)
Q Consensus       183 ~~~~~i~~~~fG~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~  246 (498)
                      +++++++.++||.+..       .....+.+.+..+......  +...+|..       ..++..+..+.+.+++++.++
T Consensus       179 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  258 (514)
T PLN03112        179 FSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIID  258 (514)
T ss_pred             HHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998732       1122233333333222111  11112221       123444556667777777777


Q ss_pred             HHHccc------ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhC
Q 010899          247 IRRKGL------ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSEN  320 (498)
Q Consensus       247 ~~~~~~------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  320 (498)
                      ++++..      ....|+++.+++...++            ....++++++.+++..+++||+|||+++++|++++|++|
T Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~------------~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~  326 (514)
T PLN03112        259 EHRRARSGKLPGGKDMDFVDVLLSLPGEN------------GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKN  326 (514)
T ss_pred             HHHHhhcccccCCccchHHHHHHHhhccc------------cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhC
Confidence            665421      23458999998754220            122589999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccc
Q 010899          321 EEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSI  399 (498)
Q Consensus       321 P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~  399 (498)
                      |++|+|+++|++++++.  ++.++.+++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|.++.+++
T Consensus       327 P~vq~kl~~Ei~~~~~~--~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~  404 (514)
T PLN03112        327 PRVLRKIQEELDSVVGR--NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGL  404 (514)
T ss_pred             hHHHHHHHHHHHHhcCC--CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHh
Confidence            99999999999999854  2568999999999999999999999999996 68999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCC--------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCC--CCc
Q 010899          400 HLDSTVHSNPYKFNPSRFDGDES--------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSD--SSI  469 (498)
Q Consensus       400 ~~d~~~~~~p~~F~PeR~l~~~~--------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~  469 (498)
                      ||||++|+||++|+||||...++        ....++|||.|+|.|||++||++|+++++++||++|||++.++.  ..+
T Consensus       405 h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  484 (514)
T PLN03112        405 GRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDI  484 (514)
T ss_pred             hCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccC
Confidence            99999999999999999865321        13579999999999999999999999999999999999986542  122


Q ss_pred             cc---ccccccCCCCcceEEeecc
Q 010899          470 DK---WAMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       470 ~~---~~~~~~~~~~~~v~~~~r~  490 (498)
                      ..   ......+++++++.+++|.
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        485 DTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             CCccccCcccccCCCeEEEeecCC
Confidence            22   1233446779999999984


No 20 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2e-72  Score=552.87  Aligned_cols=442  Identities=25%  Similarity=0.378  Sum_probs=338.0

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccch
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRY  112 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~  112 (498)
                      +...+.||||+++|++||++++.     ..+++.++.+++++||+||++++++.++|+++||+++++++.+++..|.+++
T Consensus        25 ~~~~~~ppgp~~~p~~G~l~~l~-----~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~   99 (502)
T PLN02966         25 TKRYKLPPGPSPLPVIGNLLQLQ-----KLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP   99 (502)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcC-----CCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCC
Confidence            34456799999999999998873     3458889999999999999999999999999999999999988777777664


Q ss_pred             hhhhhhh--hCCCcc-eecccHhHHHHHHH-HHhccChhhHHhhHHHHHHHHHHHHHhhh---hcCcchhhHHHHHhhHH
Q 010899          113 IKSVGEI--VGDNSV-LCASTQRHKLIRSR-LANLFSLSSLSIFTKQFDQLVLENLSDWE---HKAATVVVLREALKVTF  185 (498)
Q Consensus       113 ~~~~~~~--~g~~~l-~~~~g~~~~~~R~~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~d~~~~~~~~~~  185 (498)
                      .......  .|...+ +..+|+.|+++|+. +++.|+.+++..+.+.+.+.+.++++.|.   .++..+|+.+++..+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~  179 (502)
T PLN02966        100 PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN  179 (502)
T ss_pred             CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence            3221112  232223 34568999999999 88999999999999999999999999883   22327899999999999


Q ss_pred             HHHHHHHccCCcchh---HHHHHHHHHHHHHHHhc--cCCCCchH-------HHHh-hhhHHHHHHHHHHHHHHHHHccc
Q 010899          186 KAMCKILLSLESGKE---LEMLENDVTRVYDAMLA--FPLKLPWT-------KFYR-GVKARKRIMRTLEKMINIRRKGL  252 (498)
Q Consensus       186 ~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~-~~~~~~~~~~~~~~~i~~~~~~~  252 (498)
                      ++++.++||.+.+..   ...+.+.+......+..  +..++|..       .+.+ .....+...+.+.+.++++....
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        180 SVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999874322   22233322222211111  00112211       1111 12234445555666655543211


Q ss_pred             ---ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHH
Q 010899          253 ---ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKA  329 (498)
Q Consensus       253 ---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~  329 (498)
                         ....++++.+++..+++.           .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       260 ~~~~~~~~~l~~l~~~~~~~~-----------~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~  328 (502)
T PLN02966        260 RVKPETESMIDLLMEIYKEQP-----------FASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQA  328 (502)
T ss_pred             ccccccccHHHHHHHHHhccC-----------cCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence               234689999886543210           123589999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCCC-C
Q 010899          330 EHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVH-S  407 (498)
Q Consensus       330 Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~  407 (498)
                      |++++.+..++..++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.+++|++||||++| |
T Consensus       329 Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        329 EVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             HHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccC
Confidence            99999854323467999999999999999999999999997 689999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCCC----CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCC--Cccc--ccccccCC
Q 010899          408 NPYKFNPSRFDGDES----KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDS--SIDK--WAMFARLK  479 (498)
Q Consensus       408 ~p~~F~PeR~l~~~~----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~--~~~~~~~~  479 (498)
                      ||++|+||||++.+.    ....|+|||.|+|.|+|++||++|+++++|+||++|+|++.++..  .++.  ..+...+.
T Consensus       409 dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02966        409 NPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHK  488 (502)
T ss_pred             ChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeecc
Confidence            999999999997432    356899999999999999999999999999999999999876532  2221  12334434


Q ss_pred             CCcceEEeeccc
Q 010899          480 SGCPIHVKSTNM  491 (498)
Q Consensus       480 ~~~~v~~~~r~~  491 (498)
                      .+ ++++++++.
T Consensus       489 ~~-~~~~~~~~~  499 (502)
T PLN02966        489 SQ-HLKLVPEKV  499 (502)
T ss_pred             CC-CeEEEEEeC
Confidence            44 555665554


No 21 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.9e-71  Score=490.68  Aligned_cols=432  Identities=22%  Similarity=0.336  Sum_probs=361.0

Q ss_pred             CCCCCCCC-CcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCc--cccchh
Q 010899           37 SIPPGSEG-LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGEN--FTKRYI  113 (498)
Q Consensus        37 ~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~--~~~~~~  113 (498)
                      +.||--.+ .||+|+...|      ++++.+++++.++|||+||++.++|+.+.++.+|+....+++.....  |...+.
T Consensus        31 ~~PPli~gwiP~lG~a~~f------gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~  104 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF------GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYS  104 (486)
T ss_pred             CCCcccccCcchhhHHHHh------ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHH
Confidence            56777665 6999999999      89999999999999999999999999999999999999999776333  333344


Q ss_pred             hhhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHh-hhhcCcchhhHHHHHhhHHHHHHHHH
Q 010899          114 KSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSD-WEHKAATVVVLREALKVTFKAMCKIL  192 (498)
Q Consensus       114 ~~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~d~~~~~~~~~~~~i~~~~  192 (498)
                      ......+|.+.+...+......+.+.+...+...+++++.+.|.+++.+.++. |.... ..|....+..+..-.++.++
T Consensus       105 ~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~-~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  105 KLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESG-ETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             HhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhccccccc-chhHhhhhhHHHhhhhHHHh
Confidence            55667788766666778888888999999999999999999999999999988 64433 55555555555444455554


Q ss_pred             -ccCCcchhHHHHHHHHHHHHHHHh----ccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHcccc-cchhHHHhhhhhh
Q 010899          193 -LSLESGKELEMLENDVTRVYDAML----AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLE-THEDFLQCLLAED  266 (498)
Q Consensus       193 -fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ll~~~  266 (498)
                       +|..-+..+......+.++.+.+.    .+|.++|....++..++++.+.+.+...+.++++..+ .+.|+++.+++.+
T Consensus       184 l~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~~y  263 (486)
T KOG0684|consen  184 LGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISKWDNDMLQSLMEKY  263 (486)
T ss_pred             hhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHh
Confidence             444333322233333334443332    3455777777888889999999999999999998774 5669999999843


Q ss_pred             ccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChh
Q 010899          267 AVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLE  346 (498)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~  346 (498)
                      +              ++...+++|+....+..++||+.|++.+.+|++++|++|||+++.+++|+.++++.. ...++++
T Consensus       264 ~--------------dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~-~~~l~~d  328 (486)
T KOG0684|consen  264 K--------------DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEK-KEKLTYD  328 (486)
T ss_pred             h--------------cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc-CCCCCHH
Confidence            3              455789999999999999999999999999999999999999999999999999653 3459999


Q ss_pred             hhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccC----eEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC
Q 010899          347 DLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEG----YVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES  422 (498)
Q Consensus       347 ~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~  422 (498)
                      .++++|+|+.||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.++++.+||||++|+||+.|+|+||+.+++
T Consensus       329 ~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~  408 (486)
T KOG0684|consen  329 QLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNG  408 (486)
T ss_pred             HHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCc
Confidence            9999999999999999999999998899999999976    999999999999999999999999999999999997543


Q ss_pred             C--------CCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeec-CCCCcccccccccCCCCcceEEeecc
Q 010899          423 K--------PYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMID-SDSSIDKWAMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       423 ~--------~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r~  490 (498)
                      +        ...++|||+|+|.|||++||.+|+++++..+|+.||+++.+ +-+++++...+..|.++|+|++++|.
T Consensus       409 ~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  409 ESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             ccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            2        34579999999999999999999999999999999999999 56677777778999999999999986


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-70  Score=537.31  Aligned_cols=429  Identities=19%  Similarity=0.262  Sum_probs=327.7

Q ss_pred             CCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEE---eccCCcceEEEcCHHHHHHHHhhcCCccccchhh
Q 010899           38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFR---TNIFATTNVFFSSTGAAKIILNNEGENFTKRYIK  114 (498)
Q Consensus        38 ~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~  114 (498)
                      ..|||+++|++||+..+...   ....++++.+...+||..++   .++|+.++|+|+||+++++|+.++...|.++...
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~  108 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQ---IPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF  108 (500)
T ss_pred             CCCCCCCCCcccchHHHHHc---cCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence            36889999999999887532   22356666666667886655   5788999999999999999999887778876432


Q ss_pred             -hhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhh--HHHHHHHHHHHHHhhh---hcCcchhhHHHHHhhHHHHH
Q 010899          115 -SVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF--TKQFDQLVLENLSDWE---HKAATVVVLREALKVTFKAM  188 (498)
Q Consensus       115 -~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~--~~~~~~~~~~~l~~~~---~~~~~~d~~~~~~~~~~~~i  188 (498)
                       .....+| .+++.++|+.|+++|+++++.|+.+.+...  .+.+.+.+..+++.+.   ..+..+|+.+.+..+++|++
T Consensus       109 ~~~~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        109 KKIFDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence             2234455 688889999999999999999998877643  2445555555555442   22227999999999999999


Q ss_pred             HHHHccCCcchh-----HHHHHHHHHHHHHHH---hccCC-------CCchHHHHhhhhHHHHHHHHHHHHHHHHHccc-
Q 010899          189 CKILLSLESGKE-----LEMLENDVTRVYDAM---LAFPL-------KLPWTKFYRGVKARKRIMRTLEKMINIRRKGL-  252 (498)
Q Consensus       189 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  252 (498)
                      ++++||.+.+..     ...+.+.+.......   ...|.       +++....++..++.+.+.+++.+.|+++++.. 
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999863211     112222222221111   01111       11111123455677788888888888876531 


Q ss_pred             ------ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHH
Q 010899          253 ------ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDK  326 (498)
Q Consensus       253 ------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~k  326 (498)
                            +...|+++.+++....+          .+....++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~----------~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~k  337 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSK----------YKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAK  337 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccc----------cccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHH
Confidence                  11368888888653210          00112478899999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccc-cCeEecCCcEEeeccccccCCCCC
Q 010899          327 LKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI-EGYVIKAGWSVNIDAKSIHLDSTV  405 (498)
Q Consensus       327 l~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~  405 (498)
                      +++||++++        +.+++.+||||+|||+||||++|+++.+.|.+.+|.++ +||.||||+.|.+++|++||||++
T Consensus       338 l~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~  409 (500)
T PLN02169        338 IRHEINTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSV  409 (500)
T ss_pred             HHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccc
Confidence            999998763        57899999999999999999999999988888777665 999999999999999999999999


Q ss_pred             C-CCCCCCCCCCCCCCCC-----CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCccc-ccccccC
Q 010899          406 H-SNPYKFNPSRFDGDES-----KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDK-WAMFARL  478 (498)
Q Consensus       406 ~-~~p~~F~PeR~l~~~~-----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~  478 (498)
                      | +||++|+||||+++++     .+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++.. +.. ...+..|
T Consensus       410 w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~-~~~~~~~~l~~  488 (500)
T PLN02169        410 WGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK-IEAIPSILLRM  488 (500)
T ss_pred             cCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC-cccccceEEec
Confidence            9 8999999999997432     256899999999999999999999999999999999999875432 222 2345789


Q ss_pred             CCCcceEEeec
Q 010899          479 KSGCPIHVKST  489 (498)
Q Consensus       479 ~~~~~v~~~~r  489 (498)
                      +++++|++++|
T Consensus       489 ~~gl~l~l~~~  499 (500)
T PLN02169        489 KHGLKVTVTKK  499 (500)
T ss_pred             CCCEEEEEEeC
Confidence            99999999986


No 23 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.8e-70  Score=536.33  Aligned_cols=440  Identities=16%  Similarity=0.269  Sum_probs=331.0

Q ss_pred             CCCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhc-CCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           32 GRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKY-GDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        32 ~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      .++..+.||||+++|++||++++..    ......++.++.++| |+||++++|+.++|+|+||+++++++++++..|++
T Consensus        35 ~~~~~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~  110 (534)
T PLN03018         35 KDRSRQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLAD  110 (534)
T ss_pred             CCCCCCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcC
Confidence            3444557999999999999988731    111123455555555 79999999999999999999999999988888988


Q ss_pred             chhhhhhhhhCCC--cceec-ccHhHHHHHHHHHhccChhhHHh-hHHHHHHHHHHHHHhhh----hcCcchhhHHHHHh
Q 010899          111 RYIKSVGEIVGDN--SVLCA-STQRHKLIRSRLANLFSLSSLSI-FTKQFDQLVLENLSDWE----HKAATVVVLREALK  182 (498)
Q Consensus       111 ~~~~~~~~~~g~~--~l~~~-~g~~~~~~R~~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~~----~~~~~~d~~~~~~~  182 (498)
                      ++.......++.+  +++.. +|+.|+++|+++++.|......+ +.+..++++.++++.+.    .++ ++|+.+.+..
T Consensus       111 rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~vd~~~~~~~  189 (534)
T PLN03018        111 RPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSE-TVDVRELSRV  189 (534)
T ss_pred             CCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-ceeHHHHHHH
Confidence            8644333334432  46655 49999999999999876544444 44455556667776663    233 7899999999


Q ss_pred             hHHHHHHHHHccCCcch---------h-HHHHHHHHHHHHHHHhccCCC-----Cc-hHH-------HHhhhhHHHHHHH
Q 010899          183 VTFKAMCKILLSLESGK---------E-LEMLENDVTRVYDAMLAFPLK-----LP-WTK-------FYRGVKARKRIMR  239 (498)
Q Consensus       183 ~~~~~i~~~~fG~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~-----~p-~~~-------~~~~~~~~~~~~~  239 (498)
                      ++++++++++||.+.+.         . ...+...+......+..++..     +| +..       ..+.......+.+
T Consensus       190 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  269 (534)
T PLN03018        190 YGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRS  269 (534)
T ss_pred             HHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHH
Confidence            99999999999987321         1 111111122222222222211     12 111       0112223344566


Q ss_pred             HHHHHHHHHHccc----c--cchhHHHhhhhhhccchhhhccCCCCCCCCC-CCCHHHHHHHHHHHHhhchhcHHHHHHH
Q 010899          240 TLEKMINIRRKGL----E--THEDFLQCLLAEDAVDKDRASLSSSSSETPK-KLTDEEIQDNILTMIIAGQDTTASAITW  312 (498)
Q Consensus       240 ~~~~~i~~~~~~~----~--~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~  312 (498)
                      ++.+.++++++..    .  ...|+++.++...++             ++. .++++++.+++..+++||+|||+.+++|
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-------------~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~  336 (534)
T PLN03018        270 YNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQ-------------NGKYLVTPDEIKAQCVEFCIAAIDNPANNMEW  336 (534)
T ss_pred             HHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcc-------------cCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            6677777665321    1  246899999875421             121 4899999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcC-cceeccCccccCeEecCCcE
Q 010899          313 MVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWY-PRLVIHDCEIEGYVIKAGWS  391 (498)
Q Consensus       313 ~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~-~R~~~~d~~i~g~~ip~G~~  391 (498)
                      ++++|++||++|+|+++||+++.+.  ++.++.+++.+||||+|||+||||++|+++.. +|.+.+|++++||.||||+.
T Consensus       337 ~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~  414 (534)
T PLN03018        337 TLGEMLKNPEILRKALKELDEVVGK--DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSH  414 (534)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhCC--CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCE
Confidence            9999999999999999999999854  35689999999999999999999999999974 79999999999999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCCC---------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEe
Q 010899          392 VNIDAKSIHLDSTVHSNPYKFNPSRFDGDES---------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEM  462 (498)
Q Consensus       392 v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~---------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~  462 (498)
                      |.++.+++||||++|+||++|+||||++.++         .+..++|||.|+|.|||++||.+|+++++++|+++|+|++
T Consensus       415 V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~  494 (534)
T PLN03018        415 IHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKL  494 (534)
T ss_pred             EEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEe
Confidence            9999999999999999999999999996432         2457999999999999999999999999999999999998


Q ss_pred             ecCCCCccc--ccccccCCCCcceEEeeccc
Q 010899          463 IDSDSSIDK--WAMFARLKSGCPIHVKSTNM  491 (498)
Q Consensus       463 ~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~  491 (498)
                      .++...++.  ..++...+++++|++++|.+
T Consensus       495 ~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~  525 (534)
T PLN03018        495 HQDFGPLSLEEDDASLLMAKPLLLSVEPRLA  525 (534)
T ss_pred             CCCCCCCCccccccceecCCCeEEEEEeccc
Confidence            765423222  22434456799999999943


No 24 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.3e-71  Score=546.67  Aligned_cols=428  Identities=27%  Similarity=0.449  Sum_probs=352.1

Q ss_pred             CCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhh-hhh
Q 010899           39 PPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIK-SVG  117 (498)
Q Consensus        39 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~-~~~  117 (498)
                      ||||+++|++||++++..    .++++.++.+++++|||||++++++.++++|+||+++++++.++...++.++.. ...
T Consensus         1 Ppgp~~~p~~G~~~~~~~----~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR----KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT----THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC----CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccc
Confidence            899999999999999952    366899999999999999999999999999999999999999987788776322 221


Q ss_pred             ---hhhCCCcceecccHhHHHHHHHHHhccChh-hHHhhHHHHHHHHHHHHHhhhh--cC-cchhhHHHHHhhHHHHHHH
Q 010899          118 ---EIVGDNSVLCASTQRHKLIRSRLANLFSLS-SLSIFTKQFDQLVLENLSDWEH--KA-ATVVVLREALKVTFKAMCK  190 (498)
Q Consensus       118 ---~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~-~l~~~~~~~~~~~~~~l~~~~~--~~-~~~d~~~~~~~~~~~~i~~  190 (498)
                         ...++.+++..+++.|+.+|+.+.+.|+.. .+ ++.+.+.+.++++++.+..  +. ..+|+.+++..+++++++.
T Consensus        77 ~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   77 IFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccc
Confidence               234557888888999999999999999988 66 8999999999999988832  11 1589999999999999999


Q ss_pred             HHccCCcc----hhHHHHHHHHHHHHHHH--------hccC--CCCchHHHHhhhhHHHHHHHHHHHHHHHHHcccc---
Q 010899          191 ILLSLESG----KELEMLENDVTRVYDAM--------LAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLE---  253 (498)
Q Consensus       191 ~~fG~~~~----~~~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---  253 (498)
                      ++||.+.+    .....+.+.+..+...+        ..+|  .++|...++...++.+.+.+.+.+.++++++...   
T Consensus       156 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  235 (463)
T PF00067_consen  156 VLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGD  235 (463)
T ss_dssp             HHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS
T ss_pred             ccccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99998743    22223344443333221        1111  2344444566666778888889999988876652   


Q ss_pred             -cchhHHHhhhhhh-ccchhhhccCCCCCCCC-CCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHH
Q 010899          254 -THEDFLQCLLAED-AVDKDRASLSSSSSETP-KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE  330 (498)
Q Consensus       254 -~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~E  330 (498)
                       ...|+++.++... +.             ++ ..++++++.+++..+++||++||+.+++|++++|++||++|+|+++|
T Consensus       236 ~~~~d~l~~ll~~~~~~-------------~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~E  302 (463)
T PF00067_consen  236 ESRRDLLDSLLQASSDS-------------DGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREE  302 (463)
T ss_dssp             SSCSSHHHHHHHHHHTT-------------TTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             ccccccccccccccccc-------------cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             4579999999876 21             22 37999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCC-cCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCC
Q 010899          331 HFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVA-WYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNP  409 (498)
Q Consensus       331 i~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p  409 (498)
                      ++++.+.  ++.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.|||||.|.++.+++|+||++|+||
T Consensus       303 i~~~~~~--~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp  380 (463)
T PF00067_consen  303 IDSVLGD--GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDP  380 (463)
T ss_dssp             HHHHTTT--SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSST
T ss_pred             ccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999843  247899999999999999999999999999 6899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC----CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCccc--ccccccCCCCcc
Q 010899          410 YKFNPSRFDGDES----KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDK--WAMFARLKSGCP  483 (498)
Q Consensus       410 ~~F~PeR~l~~~~----~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~~~  483 (498)
                      ++|+||||++.+.    ....|+|||.|+|.|||++||++|+++++++||++|||++.++......  ...+..|+.++.
T Consensus       381 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (463)
T PF00067_consen  381 DEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLK  460 (463)
T ss_dssp             TS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSE
T ss_pred             cccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcE
Confidence            9999999998754    4788999999999999999999999999999999999999765443222  224577777777


Q ss_pred             eEE
Q 010899          484 IHV  486 (498)
Q Consensus       484 v~~  486 (498)
                      |+|
T Consensus       461 ~~~  463 (463)
T PF00067_consen  461 VKF  463 (463)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            764


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.4e-70  Score=540.58  Aligned_cols=429  Identities=21%  Similarity=0.300  Sum_probs=326.0

Q ss_pred             CCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhc---CCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhh-
Q 010899           39 PPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKY---GDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIK-  114 (498)
Q Consensus        39 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~-  114 (498)
                      +|||+++|++||++.+..      + +..+.++.++|   |++|++++|+.+.|+++||+++++++.++...|.+.... 
T Consensus        32 ~pgp~~~p~~G~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK------N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             cCCCCCCCeecchHHHHh------c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            789999999999887642      1 12233444455   899999999999999999999999998765566665322 


Q ss_pred             -hhhhhhCCCcceecccHhHHHHHHHHHhccChhhHHhhHHHH-HHHHHHHHHhh----hhcCcchhhHHHHHhhHHHHH
Q 010899          115 -SVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQF-DQLVLENLSDW----EHKAATVVVLREALKVTFKAM  188 (498)
Q Consensus       115 -~~~~~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~-~~~~~~~l~~~----~~~~~~~d~~~~~~~~~~~~i  188 (498)
                       .....+| .+++..+|+.|+++|+++++.|+.++++.+.+.+ .+.+..+.+.+    ..++ .+|+.+++..++++++
T Consensus       105 ~~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~-~vd~~~~~~~~~~dvi  182 (516)
T PLN03195        105 SYMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQ-VVDMQDLFMRMTLDSI  182 (516)
T ss_pred             HHHHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-eEcHHHHHHHHHHHHH
Confidence             2223345 5677789999999999999999999999998876 44454444444    2344 7999999999999999


Q ss_pred             HHHHccCCcchh-----HHHHHHHHHHHHHHH--hcc-CCC-----CchHHHHhhhhHHHHHHHHHHHHHHHHHccc---
Q 010899          189 CKILLSLESGKE-----LEMLENDVTRVYDAM--LAF-PLK-----LPWTKFYRGVKARKRIMRTLEKMINIRRKGL---  252 (498)
Q Consensus       189 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~--~~~-~~~-----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---  252 (498)
                      +.++||.+.+..     ...+.+.+.......  ..+ +.+     ++....+...+....+.+++.+.++++++..   
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        183 CKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             HHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999874321     112322222221111  001 110     0100112223455567777777777665421   


Q ss_pred             -----ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHH
Q 010899          253 -----ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKL  327 (498)
Q Consensus       253 -----~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl  327 (498)
                           ....|+++.+++...+             .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~-------------~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl  329 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGED-------------PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKL  329 (516)
T ss_pred             ccccccccccHHHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHH
Confidence                 1245899988864321             2235899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhc------------------cCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccc-cCeEecC
Q 010899          328 KAEHFPLMERT------------------KKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI-EGYVIKA  388 (498)
Q Consensus       328 ~~Ei~~~~~~~------------------~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i-~g~~ip~  388 (498)
                      ++|++++.+..                  .++.++++++++||||+|||+||||++|+++..+|.+.+|.++ +||.|||
T Consensus       330 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~Ipk  409 (516)
T PLN03195        330 YSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKA  409 (516)
T ss_pred             HHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECC
Confidence            99999886421                  0245799999999999999999999999999988888887776 9999999


Q ss_pred             CcEEeeccccccCCCCCC-CCCCCCCCCCCCCCC----CCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEee
Q 010899          389 GWSVNIDAKSIHLDSTVH-SNPYKFNPSRFDGDE----SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMI  463 (498)
Q Consensus       389 G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~  463 (498)
                      ||.|.++.|++||||++| +||++|+||||++..    ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.
T Consensus       410 Gt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~  489 (516)
T PLN03195        410 GGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLV  489 (516)
T ss_pred             CCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEec
Confidence            999999999999999999 999999999999632    134579999999999999999999999999999999999986


Q ss_pred             cCCCCccc-ccccccCCCCcceEEeecc
Q 010899          464 DSDSSIDK-WAMFARLKSGCPIHVKSTN  490 (498)
Q Consensus       464 ~~~~~~~~-~~~~~~~~~~~~v~~~~r~  490 (498)
                      ++.+ ... ...+..|+++++|++++|.
T Consensus       490 ~~~~-~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        490 PGHP-VKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             CCCc-ceeeeeeEEecCCCEEEEEEeCC
Confidence            5432 222 2234679999999999874


No 26 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.7e-70  Score=532.73  Aligned_cols=427  Identities=24%  Similarity=0.338  Sum_probs=332.7

Q ss_pred             CCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhhhhhh
Q 010899           39 PPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGE  118 (498)
Q Consensus        39 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~  118 (498)
                      ||||+++|++||++++.     ..+++.++.+++++||+||++++|+.++|+|+||+++++++.++...|+++.......
T Consensus         1 ppgp~~lP~iG~l~~~~-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~   75 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLK-----EKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALT   75 (466)
T ss_pred             CcCCCCCCccccHHHcC-----CCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHH
Confidence            78999999999999883     3458899999999999999999999999999999999999999888888875333223


Q ss_pred             -hhCCC-cceec-ccHhHHHHHHHHH-hccChhhHHhhHHHHHHHHHHHHHhh----h-hcCcchhhHHHHHhhHHHHHH
Q 010899          119 -IVGDN-SVLCA-STQRHKLIRSRLA-NLFSLSSLSIFTKQFDQLVLENLSDW----E-HKAATVVVLREALKVTFKAMC  189 (498)
Q Consensus       119 -~~g~~-~l~~~-~g~~~~~~R~~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~----~-~~~~~~d~~~~~~~~~~~~i~  189 (498)
                       +.|++ .++.. +|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+    . ..+..+|+...+..+++++++
T Consensus        76 ~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         76 VLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence             33433 34444 4899999997665 56777777777777766666655555    1 123379999999999999999


Q ss_pred             HHHccCCcchh----H-------HHHHHHHHHHHHHHhccC--CCCch------HHHHhhh-hHHHHHHHHHHHHHHHHH
Q 010899          190 KILLSLESGKE----L-------EMLENDVTRVYDAMLAFP--LKLPW------TKFYRGV-KARKRIMRTLEKMINIRR  249 (498)
Q Consensus       190 ~~~fG~~~~~~----~-------~~~~~~~~~~~~~~~~~~--~~~p~------~~~~~~~-~~~~~~~~~~~~~i~~~~  249 (498)
                      .++||.+.+..    .       ..+.+.+..+........  ..+|.      ..+.+.. .....+.+++.+.+++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999873321    1       111122222222211111  12221      1112111 122334466667776655


Q ss_pred             ccc---ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHH
Q 010899          250 KGL---ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDK  326 (498)
Q Consensus       250 ~~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~k  326 (498)
                      +..   ....|+++.+++..                 ..++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       236 ~~~~~~~~~~d~l~~ll~~~-----------------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~  298 (466)
T PLN02655        236 KRIARGEERDCYLDFLLSEA-----------------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQER  298 (466)
T ss_pred             HhhcCCCCcccHHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            431   23458999998643                 1489999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCC
Q 010899          327 LKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV  405 (498)
Q Consensus       327 l~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  405 (498)
                      +++|++++.+.   ..++.++++++|||+|||+||||++|+++. .+|.+.+|++++||.|||||.|.++.+++||||++
T Consensus       299 l~~Ei~~~~~~---~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~  375 (466)
T PLN02655        299 LYREIREVCGD---ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKR  375 (466)
T ss_pred             HHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCccc
Confidence            99999999854   338999999999999999999999999987 57999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC---CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCC-CcccccccccCCCC
Q 010899          406 HSNPYKFNPSRFDGDES---KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDS-SIDKWAMFARLKSG  481 (498)
Q Consensus       406 ~~~p~~F~PeR~l~~~~---~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~  481 (498)
                      |+||++|+||||++...   +...++|||.|+|.|||++||..++++++++||++|+|++.++.. .......+..++++
T Consensus       376 ~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  455 (466)
T PLN02655        376 WENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHP  455 (466)
T ss_pred             CCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCC
Confidence            99999999999997532   246899999999999999999999999999999999999876543 22333444678899


Q ss_pred             cceEEeecc
Q 010899          482 CPIHVKSTN  490 (498)
Q Consensus       482 ~~v~~~~r~  490 (498)
                      +.|++++|.
T Consensus       456 ~~~~~~~r~  464 (466)
T PLN02655        456 LHAHLKPRG  464 (466)
T ss_pred             cEEEEeecC
Confidence            999998875


No 27 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-70  Score=498.75  Aligned_cols=435  Identities=22%  Similarity=0.374  Sum_probs=355.3

Q ss_pred             CCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEec-cCCcceEEEcCHHHHHHHHhhcCCccccch
Q 010899           34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTN-IFATTNVFFSSTGAAKIILNNEGENFTKRY  112 (498)
Q Consensus        34 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~~~~~v~~il~~~~~~~~~~~  112 (498)
                      .+...+|||.++|++|.++.+. .. ...+.|+.....+++|||||+.. +|+...|++.||++++.++++++ .+.-|+
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~-~~-~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp  123 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWR-AG-GATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRP  123 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHH-hh-hhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcc
Confidence            3455689999999999887532 11 14568889999999999999999 78889999999999999998875 334332


Q ss_pred             -----hhhhhhhh-CCCcceecccHhHHHHHHHHHhc-cChhhHHhhHHHHHHHHHHHHHhh---h---hcCcchhhHHH
Q 010899          113 -----IKSVGEIV-GDNSVLCASTQRHKLIRSRLANL-FSLSSLSIFTKQFDQLVLENLSDW---E---HKAATVVVLRE  179 (498)
Q Consensus       113 -----~~~~~~~~-g~~~l~~~~g~~~~~~R~~l~~~-f~~~~l~~~~~~~~~~~~~~l~~~---~---~~~~~~d~~~~  179 (498)
                           .....+.+ +..|++..+|++|.+.|..+++. +.+++++.+.+.+.+.+.+++..+   .   ++....|+.+.
T Consensus       124 ~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~  203 (519)
T KOG0159|consen  124 LLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE  203 (519)
T ss_pred             cccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence                 11223334 44789999999999999999985 568999999999999999999887   1   23336799999


Q ss_pred             HHhhHHHHHHHHHccCCcc-------hhHHHHHHHHHHHHHHHhc---cC---CCCchHHHHhhhhHHHHHHHHHHHHHH
Q 010899          180 ALKVTFKAMCKILLSLESG-------KELEMLENDVTRVYDAMLA---FP---LKLPWTKFYRGVKARKRIMRTLEKMIN  246 (498)
Q Consensus       180 ~~~~~~~~i~~~~fG~~~~-------~~~~~~~~~~~~~~~~~~~---~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~  246 (498)
                      +.+++++.+|.++||.+.+       +....+.+.+..++.....   .|   .+++...|++..++.+.+.+...+.|+
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998732       3444555555554443221   22   135566688888888888887777777


Q ss_pred             HHHccc----c---cchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhh
Q 010899          247 IRRKGL----E---THEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSE  319 (498)
Q Consensus       247 ~~~~~~----~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  319 (498)
                      +..+..    .   ...+++-.++..                  ..++.+++..++++++.||.|||+.++.|+||+|++
T Consensus       284 ~~l~~l~~~~~~~~~~~~~l~~~L~~------------------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~Lar  345 (519)
T KOG0159|consen  284 NALEELEKQDSAGSEYTGSLLELLLR------------------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELAR  345 (519)
T ss_pred             HHHHHHHhccccccchhHHHHHHHHH------------------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhc
Confidence            654332    1   223344444332                  248899999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccc
Q 010899          320 NEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSI  399 (498)
Q Consensus       320 ~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~  399 (498)
                      ||++|++|++|+.++.... ++.++.+++.++|||+||||||+||||.+++..|...+|.+++||.|||||.|.++.+.+
T Consensus       346 nP~~Q~~L~~Ei~~~~p~~-~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~  424 (519)
T KOG0159|consen  346 NPEVQQRLREEILAVLPSG-NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVL  424 (519)
T ss_pred             ChHHHHHHHHHHHhhCCCc-ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhh
Confidence            9999999999999998542 477999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCC-C--CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCccc-cccc
Q 010899          400 HLDSTVHSNPYKFNPSRFDGDE-S--KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDK-WAMF  475 (498)
Q Consensus       400 ~~d~~~~~~p~~F~PeR~l~~~-~--~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~  475 (498)
                      .+||+.|++|++|+|||||+++ +  ++..++|||.|+|.|+|+.+|.+|+.+++|+++++|+++..++. ++++ ...+
T Consensus       425 ~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-pv~~~~~~i  503 (519)
T KOG0159|consen  425 GRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-PVEYVYRFI  503 (519)
T ss_pred             ccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-CccceeEEE
Confidence            9999999999999999999976 3  47889999999999999999999999999999999999987753 3333 3556


Q ss_pred             ccCCCCcceEEeeccc
Q 010899          476 ARLKSGCPIHVKSTNM  491 (498)
Q Consensus       476 ~~~~~~~~v~~~~r~~  491 (498)
                      ..|..++.+++++|+.
T Consensus       504 l~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  504 LVPNRPLRFKFRPRNE  519 (519)
T ss_pred             EcCCCCcceeeeeCCC
Confidence            8899999999999863


No 28 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.8e-69  Score=533.56  Aligned_cols=410  Identities=21%  Similarity=0.328  Sum_probs=324.1

Q ss_pred             CcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhhhhhhhhCCCcceecccHhHHHHHHHH
Q 010899           61 SQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRL  140 (498)
Q Consensus        61 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~l  140 (498)
                      ++.++..+.++|++|||||++++|+.++++|+||+.++++|.++...|.++..........+.+++..+|+.|+.+|+.+
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l  229 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAI  229 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhc
Confidence            55688899999999999999999888999999999999999877777777643222222233577788999999999999


Q ss_pred             HhccChhhHHhhHHHHHHHHHHHHHhhh----hcCcchhhHHHHHhhHHHHHHHHHccCCcchh--HHHHHHHHHHHHHH
Q 010899          141 ANLFSLSSLSIFTKQFDQLVLENLSDWE----HKAATVVVLREALKVTFKAMCKILLSLESGKE--LEMLENDVTRVYDA  214 (498)
Q Consensus       141 ~~~f~~~~l~~~~~~~~~~~~~~l~~~~----~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~  214 (498)
                      ++.|+.+++..+.+.+.+.++++++++.    .++ .+|+...+..+++|+++.++||.+.+..  ...+.+.+......
T Consensus       230 ~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~-~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~  308 (633)
T PLN02738        230 VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGE-DVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLRE  308 (633)
T ss_pred             cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            9999999999999999999999988883    244 8999999999999999999999874421  11222222222211


Q ss_pred             H-----hccCCC-CchHH-----HHhhhhHHHHHHHHHHHHHHHHHcc-------------cccchhHHHhhhhhhccch
Q 010899          215 M-----LAFPLK-LPWTK-----FYRGVKARKRIMRTLEKMINIRRKG-------------LETHEDFLQCLLAEDAVDK  270 (498)
Q Consensus       215 ~-----~~~~~~-~p~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~ll~~~~~~~  270 (498)
                      .     ..++.+ +|...     .++..+..+.+.+.+.+.++.++..             .....|+++.+++..    
T Consensus       309 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~----  384 (633)
T PLN02738        309 AEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG----  384 (633)
T ss_pred             HHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC----
Confidence            1     111111 12111     1222233444444454444432210             012357888877532    


Q ss_pred             hhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChhhhcC
Q 010899          271 DRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR  350 (498)
Q Consensus       271 ~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~  350 (498)
                                   ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++++.   ..++++++++
T Consensus       385 -------------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t~edL~k  448 (633)
T PLN02738        385 -------------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPTIEDMKK  448 (633)
T ss_pred             -------------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCCHHHHcc
Confidence                         248899999999999999999999999999999999999999999999999853   5689999999


Q ss_pred             ChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCC------CC
Q 010899          351 MPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDES------KP  424 (498)
Q Consensus       351 lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~------~~  424 (498)
                      ||||+|||+|+|||+|+++.++|.+.+|++++||.|||||.|.++.|.+||||++||||++|+||||+..+.      ..
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~  528 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQN  528 (633)
T ss_pred             CHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCC
Confidence            999999999999999999988899999999999999999999999999999999999999999999985321      24


Q ss_pred             CccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccc-cccccCCCCcceEEeeccc
Q 010899          425 YGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKW-AMFARLKSGCPIHVKSTNM  491 (498)
Q Consensus       425 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~r~~  491 (498)
                      ..++|||.|+|.|+|++||++|+++++|.|+++|+|++.++.+.+... ..+..|.++++|++++|..
T Consensus       529 ~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        529 FSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCC
Confidence            579999999999999999999999999999999999987765433332 3457788999999999854


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3e-68  Score=520.57  Aligned_cols=432  Identities=21%  Similarity=0.307  Sum_probs=339.7

Q ss_pred             CCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchhhhh-hh
Q 010899           40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSV-GE  118 (498)
Q Consensus        40 Pgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~-~~  118 (498)
                      .|..|||++|+.+++..... +..++..+.+++++|||||++++|+.+.++++||+++++++.+.+..|.++..... ..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~   93 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLL-GGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF   93 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHh-ccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence            57789999999999987665 44588999999999999999999999999999999999999877677877643322 22


Q ss_pred             hhCCCcceecccHhHHHHHHHHHhccChhhHHhhHH-HHHHHHHHHHHhhh----hcCcchhhHHHHHhhHHHHHHHHHc
Q 010899          119 IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTK-QFDQLVLENLSDWE----HKAATVVVLREALKVTFKAMCKILL  193 (498)
Q Consensus       119 ~~g~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~-~~~~~~~~~l~~~~----~~~~~~d~~~~~~~~~~~~i~~~~f  193 (498)
                      .+| .+++..+|+.|+++|+.+++.|+.+.+..+.+ .+.+.++++++.+.    .++ ++|+.+++..+++++++.++|
T Consensus        94 ~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~-~vd~~~~~~~~~~dvi~~~~f  171 (489)
T PLN02936         94 LFG-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGE-AVNMEAKFSQLTLDVIGLSVF  171 (489)
T ss_pred             Hhc-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ceeHHHHHHHHHHHHHHHHHc
Confidence            344 57777899999999999999999888888765 66777777777762    234 799999999999999999999


Q ss_pred             cCCcchh--HHHHHHHHHHHHHHH-----hccCCC-Cch-----HHHHhhhhHHHHHHHHHHHHHHHHHccc--------
Q 010899          194 SLESGKE--LEMLENDVTRVYDAM-----LAFPLK-LPW-----TKFYRGVKARKRIMRTLEKMINIRRKGL--------  252 (498)
Q Consensus       194 G~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~-~p~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------  252 (498)
                      |.+.+..  ...+.+.+...+...     ..+|.+ .+.     ...++..++.+.+.+.+.+.++.+++..        
T Consensus       172 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~  251 (489)
T PLN02936        172 NYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIE  251 (489)
T ss_pred             CCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9985421  111222222211111     111110 010     0123444556666777777766554211        


Q ss_pred             ------ccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHH
Q 010899          253 ------ETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDK  326 (498)
Q Consensus       253 ------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~k  326 (498)
                            ....++++.++...                 ..++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       252 ~~~~~~~~~~d~l~~ll~~~-----------------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~k  314 (489)
T PLN02936        252 GEEYVNDSDPSVLRFLLASR-----------------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRK  314 (489)
T ss_pred             cccccccCchHHHHHHHhcc-----------------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHH
Confidence                  12357888877542                 1478999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCc-CcceeccCccccCeEecCCcEEeeccccccCCCCC
Q 010899          327 LKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAW-YPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTV  405 (498)
Q Consensus       327 l~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  405 (498)
                      +++|++++++.   ..++++++++||||+|||+||||++|+++. .+|.+.+|+.++||.||||+.|+++.+++||||++
T Consensus       315 l~~Ei~~~~~~---~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~  391 (489)
T PLN02936        315 AQEELDRVLQG---RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV  391 (489)
T ss_pred             HHHHHHHHhcC---CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhh
Confidence            99999999853   457899999999999999999999999886 55666777878999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC------CCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCCCcccccccccCC
Q 010899          406 HSNPYKFNPSRFDGDES------KPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDSSIDKWAMFARLK  479 (498)
Q Consensus       406 ~~~p~~F~PeR~l~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  479 (498)
                      |+||++|+||||+..+.      .+..++|||.|+|.|||++||++++++++++|+++|++++.++.+.......+..|+
T Consensus       392 ~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  471 (489)
T PLN02936        392 WERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTT  471 (489)
T ss_pred             CCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeC
Confidence            99999999999996432      135799999999999999999999999999999999999876543222223456788


Q ss_pred             CCcceEEeecccchh
Q 010899          480 SGCPIHVKSTNMKDK  494 (498)
Q Consensus       480 ~~~~v~~~~r~~~~~  494 (498)
                      ++++|++++|..-++
T Consensus       472 ~~~~v~~~~R~~~~~  486 (489)
T PLN02936        472 NGLYMTVSRRRVPDG  486 (489)
T ss_pred             CCeEEEEEeeeCCCC
Confidence            999999999987543


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.1e-65  Score=496.60  Aligned_cols=418  Identities=18%  Similarity=0.254  Sum_probs=323.7

Q ss_pred             CcccccchHHHHHhccCcchHHHHHHHHHhcC-CeEEeccCCcceEEEcCHHHHHHHHhhcCCccccchh--hhhhhhhC
Q 010899           45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYG-DCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYI--KSVGEIVG  121 (498)
Q Consensus        45 ~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~--~~~~~~~g  121 (498)
                      .++.|+....      ..+.+.++..+.++++ .+++++.++.  ++++||+.+++++.++...|.+...  ......+|
T Consensus        49 ~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g  120 (502)
T PLN02426         49 AYLTASWAKD------FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG  120 (502)
T ss_pred             CCccHHHHHh------cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC
Confidence            3577877654      2345666666777777 5778776555  8999999999999887667776532  22334556


Q ss_pred             CCcceecccHhHHHHHHHHHhccChhhHHhhH--HHHHHHHHHHHHhhh----hc-CcchhhHHHHHhhHHHHHHHHHcc
Q 010899          122 DNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--KQFDQLVLENLSDWE----HK-AATVVVLREALKVTFKAMCKILLS  194 (498)
Q Consensus       122 ~~~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~--~~~~~~~~~~l~~~~----~~-~~~~d~~~~~~~~~~~~i~~~~fG  194 (498)
                       .+++..+|+.|+++|+.+++.|+.++++.+.  +.+.+...++++.+.    .+ +.++|+.+++..+++|+++.++||
T Consensus       121 -~gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        121 -RGIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             -CceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhC
Confidence             5888899999999999999999999988864  455565555555542    11 127999999999999999999999


Q ss_pred             CCcchh-----HHHHHHHHHHHHHH-----HhccCC------CCchHHHHhhhhHHHHHHHHHHHHHHHHHccc-ccchh
Q 010899          195 LESGKE-----LEMLENDVTRVYDA-----MLAFPL------KLPWTKFYRGVKARKRIMRTLEKMINIRRKGL-ETHED  257 (498)
Q Consensus       195 ~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~  257 (498)
                      .+.+..     ...+.+.+..+...     +...+.      +++....++..++.+.+.+++.+.++++++.. ....|
T Consensus       200 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~d  279 (502)
T PLN02426        200 LDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKD  279 (502)
T ss_pred             CCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcch
Confidence            874321     12233333222111     111110      11111123455667788888888888877543 34578


Q ss_pred             HHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhh
Q 010899          258 FLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMER  337 (498)
Q Consensus       258 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  337 (498)
                      +++.+++..                   .+++++.+++..+++||+|||+++++|++|+|++||++|+|+++|++++.+.
T Consensus       280 ll~~ll~~~-------------------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~  340 (502)
T PLN02426        280 LLSRFMASI-------------------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP  340 (502)
T ss_pred             HHHHHHhcC-------------------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC
Confidence            999998642                   2578999999999999999999999999999999999999999999998754


Q ss_pred             ccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCccc-cCeEecCCcEEeeccccccCCCCCC-CCCCCCCCC
Q 010899          338 TKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEI-EGYVIKAGWSVNIDAKSIHLDSTVH-SNPYKFNPS  415 (498)
Q Consensus       338 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~Pe  415 (498)
                      + .+.++.+++++||||+|||+|+||++||++...|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||
T Consensus       341 ~-~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~Pe  419 (502)
T PLN02426        341 N-QEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPE  419 (502)
T ss_pred             C-CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCcc
Confidence            2 246899999999999999999999999999878999999887 9999999999999999999999999 999999999


Q ss_pred             CCCCCC----CCCCccccCCCCccCcccHHHHHHHHHHHHHHHHhcCeEEeecCCC-Ccccc-cccccCCCCcceEEeec
Q 010899          416 RFDGDE----SKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLITTYKWEMIDSDS-SIDKW-AMFARLKSGCPIHVKST  489 (498)
Q Consensus       416 R~l~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~v~~~~r  489 (498)
                      ||+++.    .++..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.. ..... ..+..|++|++|++++|
T Consensus       420 Rwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        420 RWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             ccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEc
Confidence            999742    2345789999999999999999999999999999999999865432 22322 34578999999999998


Q ss_pred             cc
Q 010899          490 NM  491 (498)
Q Consensus       490 ~~  491 (498)
                      ..
T Consensus       500 ~~  501 (502)
T PLN02426        500 VR  501 (502)
T ss_pred             cC
Confidence            54


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-62  Score=470.39  Aligned_cols=406  Identities=22%  Similarity=0.300  Sum_probs=304.9

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCC-eEEeccCCcce-------EEEcCHHHHHHHHhh-
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGD-CFRTNIFATTN-------VFFSSTGAAKIILNN-  103 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~~~~~v~~il~~-  103 (498)
                      ..+.+.|||+.+||++|++++|++... ..++..|+++.++|||+ ||+++++|.++       |+++||++++.+|.+ 
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~-~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~   91 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFY-FQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVS   91 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHH-hcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecch
Confidence            456677999999999999998764322 45578999999999999 99999998655       999999999999975 


Q ss_pred             ---cCCccccchhhhhhhhhCCC---cceecccHhHHHHHHHHHhccChhhHHhhHHHHHHHHHHHHHhhhh---cCcch
Q 010899          104 ---EGENFTKRYIKSVGEIVGDN---SVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEH---KAATV  174 (498)
Q Consensus       104 ---~~~~~~~~~~~~~~~~~g~~---~l~~~~g~~~~~~R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~~~---~~~~~  174 (498)
                         ++..+...+..... ++|++   +++..+|+.|+++|+++.+.|+ ..++.+.+.|.+.+.++++.|..   .+..+
T Consensus        92 ~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         92 KVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             hccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence               44445555544444 78876   6777789999999999999999 57788999999999999999932   22279


Q ss_pred             hhHHHHHhhHHHHHHHHHccCCcchhHHHHHHHHHHHHHHHhccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHc----
Q 010899          175 VVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRK----  250 (498)
Q Consensus       175 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~----  250 (498)
                      |+..++..++++++++++||.+.+.  ..+.+.+..+...+.... .+|..        ...+...+++.+.++..    
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~-~~p~~--------~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQ-LAPLA--------STGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHH-hhHHH--------HcCchHHHHHHhhcccCCchh
Confidence            9999999999999999999987544  223333322222221100 01110        00000111111110000    


Q ss_pred             -ccccchhH-------HHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHHH-HHhhchhcHHHHHHHHHHHHhhCH
Q 010899          251 -GLETHEDF-------LQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNILT-MIIAGQDTTASAITWMVKYLSENE  321 (498)
Q Consensus       251 -~~~~~~~~-------~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~P  321 (498)
                       ......++       ++.+++...              + .+++++++.++++. ..+++++|++++++|++++|++||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~ll~~~~--------------~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p  303 (480)
T PLN02648        239 LVKSDYDKLYDFFRASATEALDLAE--------------K-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAG  303 (480)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHH--------------h-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCC
Confidence             00011111       223333221              1 24899999999875 346667777889999999999999


Q ss_pred             H-HHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceeccCcccc----CeEecCCcEEeecc
Q 010899          322 E-VLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVIHDCEIE----GYVIKAGWSVNIDA  396 (498)
Q Consensus       322 ~-~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~----g~~ip~G~~v~~~~  396 (498)
                      + +|+|+++|++.+.+. .++.++.+++++||||++||+|+||++|+++...|.+.+|++++    ||.||||+.|.++.
T Consensus       304 ~~v~~klr~Ei~~~~~~-~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~  382 (480)
T PLN02648        304 EELQARLAEEVRSAVKA-GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQ  382 (480)
T ss_pred             HHHHHHHHHHHHHHhcc-CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEECh
Confidence            5 999999999998843 23568999999999999999999999999999889999999996    79999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCC-CCCccccC---------CCCccCcccHHHHHHHHHHHHHHHHhcCe-EEeecC
Q 010899          397 KSIHLDSTVHSNPYKFNPSRFDGDES-KPYGSIPF---------SMGGRACLGMHMAKAMMLVFLHRLITTYK-WEMIDS  465 (498)
Q Consensus       397 ~~~~~d~~~~~~p~~F~PeR~l~~~~-~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~  465 (498)
                      +.+||||++|+||++|+|+||++++. ....+++|         |+|+|.|||++||++|++++++.|+++|+ |++.++
T Consensus       383 ~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        383 PLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence            99999999999999999999986432 22344554         56779999999999999999999999998 997665


Q ss_pred             CCC
Q 010899          466 DSS  468 (498)
Q Consensus       466 ~~~  468 (498)
                      ...
T Consensus       463 ~~~  465 (480)
T PLN02648        463 TSG  465 (480)
T ss_pred             ccc
Confidence            443


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.9e-57  Score=428.78  Aligned_cols=380  Identities=25%  Similarity=0.355  Sum_probs=309.8

Q ss_pred             hHHHHHHHHHhcCCeEEeccCCcc--eEEEcCHHHHHHHHhhcCCccccchhh-----hhhhhhCCCcceecccHhHHHH
Q 010899           64 FYQFIQVRHLKYGDCFRTNIFATT--NVFFSSTGAAKIILNNEGENFTKRYIK-----SVGEIVGDNSVLCASTQRHKLI  136 (498)
Q Consensus        64 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~~~~~v~~il~~~~~~~~~~~~~-----~~~~~~g~~~l~~~~g~~~~~~  136 (498)
                      +......+.+.||.++.++..++.  .++++++++++++++++. .+++....     .....+|...++..||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344555677789999888876665  899999999999998763 23332111     1345566555888999999999


Q ss_pred             HHHHHhccChhhHHhhHHHHHHHHHHHHHhhhhcCcchhhHHHHHhhHHHHHHHHHccCCcchhHHHHHHHHHHHHHHHh
Q 010899          137 RSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAML  216 (498)
Q Consensus       137 R~~l~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  216 (498)
                      |++++++|+++.++.+.+.+.+.+.++++.+ .++..+++.+....+++++++ .+||...++... +..+........ 
T Consensus       103 Rkl~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~-~~~~~~~~~~~~-  178 (411)
T COG2124         103 RKLLAPAFTPRALRGYRPLIREIADRLLDDL-WQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQ-LLRWSDALLLRL-  178 (411)
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHhc-ccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHH-HHHHHHHHHhcc-
Confidence            9999999999999999999999999999998 443377788889999999999 999987544322 222222211111 


Q ss_pred             ccCCCCchHHHHhhhhHHHHHHHHHHHHHHHHHcccccchhHHHhhhhhhccchhhhccCCCCCCCCCCCCHHHHHHHHH
Q 010899          217 AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRASLSSSSSETPKKLTDEEIQDNIL  296 (498)
Q Consensus       217 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~  296 (498)
                       .+...+...+.+..++...+.+++.+.|++++.  ....|+++.++...++             .+..++++||.+++.
T Consensus       179 -~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~--~~~~dlls~l~~a~~~-------------~~~~lsd~Ei~~~~~  242 (411)
T COG2124         179 -DPDLGPEEPWRRARAARRELDAYLRALIAERRA--APRDDLLSLLLSAEDD-------------GGGRLSDDEIRDELI  242 (411)
T ss_pred             -CcccCCcccHHHHHHHHHHHHHHHHHHHHHhcc--CCcccHHHHHHHHhhC-------------CCCcCCHHHHHHHHH
Confidence             123333344677888899999999999999994  7788999999987653             222599999999999


Q ss_pred             HHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhhccCCCCChhhhcCChhHHHHHHhhhcCCCCCCcCcceec
Q 010899          297 TMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASKVVKESLRMASIVAWYPRLVI  376 (498)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~  376 (498)
                      ++++||+|||+++++|+++.|++||++++++++|.+.                  ||++++++|+||++||++.+.|.++
T Consensus       243 ~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------------~~~~~~v~E~LR~~ppv~~~~R~~~  304 (411)
T COG2124         243 TLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------------PLLEAVVEETLRLYPPVPLARRVAT  304 (411)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------------HHHHHHHHHHHHhCCchhccceecc
Confidence            9999999999999999999999999999999988643                  8999999999999999999999999


Q ss_pred             cCccccCeEecCCcEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccCcccHHHHHHHHHHHHHHHHh
Q 010899          377 HDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKFNPSRFDGDESKPYGSIPFSMGGRACLGMHMAKAMMLVFLHRLIT  456 (498)
Q Consensus       377 ~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~  456 (498)
                      +|++++|+.||||+.|.++++++||||++|+||++|||+||.      ..|+|||+|+|.|+|+.||++|++++++.+|+
T Consensus       305 ~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~  378 (411)
T COG2124         305 EDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------NAHLPFGGGPHRCLGAALARLELKVALAELLR  378 (411)
T ss_pred             CCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998      68999999999999999999999999999999


Q ss_pred             cCeEEeecCCCCcccccccccCCCCcceEEeec
Q 010899          457 TYKWEMIDSDSSIDKWAMFARLKSGCPIHVKST  489 (498)
Q Consensus       457 ~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  489 (498)
                      +|++....+. .......+..+..+..+.++.+
T Consensus       379 r~~~~~~~~~-~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         379 RFPLLLLAEP-PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             hCchhhcCCC-CCccccccccCCCcceeeeecC
Confidence            9999877662 2222233355777777776654


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=72.41  E-value=15  Score=22.65  Aligned_cols=43  Identities=19%  Similarity=0.156  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHhhchhcHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010899          289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEH  331 (498)
Q Consensus       289 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei  331 (498)
                      -++...+..++-.|.|..+-.++--+.+..-||+.+..+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566777778888999999999989999999999999988876


No 34 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=68.67  E-value=17  Score=27.15  Aligned_cols=11  Identities=18%  Similarity=0.024  Sum_probs=7.6

Q ss_pred             CCcccccchHH
Q 010899           44 GLPLIGETLQF   54 (498)
Q Consensus        44 ~~P~~G~~~~~   54 (498)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46888886554


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.45  E-value=1.6  Score=36.74  Aligned_cols=44  Identities=16%  Similarity=0.086  Sum_probs=32.4

Q ss_pred             CChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEee
Q 010899          350 RMPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNI  394 (498)
Q Consensus       350 ~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~  394 (498)
                      .-..+.|||.|+.-+..-. .+.=+..+|+.++|..|||||.++-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3456779999998775422 2323456899999999999999765


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=66.40  E-value=6.3  Score=25.32  Aligned_cols=20  Identities=50%  Similarity=0.699  Sum_probs=16.8

Q ss_pred             HHHHHHhhCHHHHHHHHHHH
Q 010899          312 WMVKYLSENEEVLDKLKAEH  331 (498)
Q Consensus       312 ~~l~~L~~~P~~~~kl~~Ei  331 (498)
                      -++.+|.+||++.+++.+.-
T Consensus         4 ~iV~YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCC
Confidence            46789999999999998753


No 37 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=65.47  E-value=9  Score=29.34  Aligned_cols=15  Identities=20%  Similarity=0.470  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHHHhcC
Q 010899           18 VIILIIMNTKKMLRG   32 (498)
Q Consensus        18 ~~~~~~~~~~~~~~~   32 (498)
                      ++++++++++|++|.
T Consensus        80 ~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   80 IILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHhcc
Confidence            333444444444433


No 38 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=63.12  E-value=12  Score=23.40  Aligned_cols=25  Identities=12%  Similarity=0.239  Sum_probs=14.7

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHH
Q 010899            1 MDETLFLYGYIVFVIGIVIILIIMN   25 (498)
Q Consensus         1 m~~~~~l~~~~~~~l~~~~~~~~~~   25 (498)
                      |+..+.++.+.+++.++.++++++.
T Consensus         1 M~il~~LIpiSl~l~~~~l~~f~Wa   25 (51)
T TIGR00847         1 MEILTILIPISLLLGGVGLVAFLWS   25 (51)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666666555555555444


No 39 
>PF13260 DUF4051:  Protein of unknown function (DUF4051)
Probab=54.13  E-value=36  Score=20.64  Aligned_cols=27  Identities=22%  Similarity=0.405  Sum_probs=16.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010899            6 FLYGYIVFVIGIVIILIIMNTKKMLRG   32 (498)
Q Consensus         6 ~l~~~~~~~l~~~~~~~~~~~~~~~~~   32 (498)
                      ++..++++++++++.-.+....++.+.
T Consensus         2 fiawywivli~lv~~gy~~hmkrycra   28 (54)
T PF13260_consen    2 FIAWYWIVLIVLVVVGYFCHMKRYCRA   28 (54)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            556667777766666666665555543


No 40 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=49.91  E-value=54  Score=24.20  Aligned_cols=63  Identities=17%  Similarity=0.100  Sum_probs=39.4

Q ss_pred             CCCCCCCCCCCCCcccccchHHHHHhccCcchHHHHHHHHHhcCCeEEeccCC------cceEEEcCHHHHHHHHhh
Q 010899           33 RSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFA------TTNVFFSSTGAAKIILNN  103 (498)
Q Consensus        33 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~------~~~vvv~~~~~v~~il~~  103 (498)
                      .++.+.||--..+-++-|++--        --.+-..++.-+||+|..+++|.      .-+||-.|...++.....
T Consensus         8 ~~~~rlppevnriLyirNLp~~--------ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen    8 KQNIRLPPEVNRILYIRNLPFK--------ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             cCCCCCChhhheeEEEecCCcc--------ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            4445556554455566665421        11233345556999999999875      457888888888877643


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=46.82  E-value=4.7  Score=38.10  Aligned_cols=44  Identities=11%  Similarity=-0.010  Sum_probs=32.6

Q ss_pred             ChhHHHHHHhhhcCCCCCCcCcceeccCccccCeEecCCcEEeec
Q 010899          351 MPYASKVVKESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNID  395 (498)
Q Consensus       351 lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~  395 (498)
                      -..+.|||.|+.-+.-- ..+-=+..+|+.++|..|||||.|+-.
T Consensus       255 ~n~I~A~V~~~qtv~~G-~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDG-SAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecC-CEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            46678999999887642 223234568999999999999987653


No 42 
>PF15050 SCIMP:  SCIMP protein
Probab=43.30  E-value=1.1e+02  Score=23.15  Aligned_cols=17  Identities=29%  Similarity=0.550  Sum_probs=10.5

Q ss_pred             CCCCCCCCC-CCcccccc
Q 010899           35 TVSIPPGSE-GLPLIGET   51 (498)
Q Consensus        35 ~~~~pPgp~-~~P~~G~~   51 (498)
                      +...||-|+ +.|+.|+.
T Consensus        66 ~~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   66 PVQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             cCCCCCCCCCCCCCcccc
Confidence            445566544 57777765


No 43 
>COG3197 FixS Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]
Probab=38.98  E-value=40  Score=21.64  Aligned_cols=25  Identities=8%  Similarity=0.070  Sum_probs=13.2

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHH
Q 010899            1 MDETLFLYGYIVFVIGIVIILIIMN   25 (498)
Q Consensus         1 m~~~~~l~~~~~~~l~~~~~~~~~~   25 (498)
                      |...+.++.+.+++.++.+..+++.
T Consensus         1 m~~l~~Lipvsi~l~~v~l~~flWa   25 (58)
T COG3197           1 MEILYILIPVSILLGAVGLGAFLWA   25 (58)
T ss_pred             CceeeeHHHHHHHHHHHHHHHHHHh
Confidence            4555556666555555555444433


No 44 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=36.90  E-value=27  Score=24.67  Aligned_cols=20  Identities=10%  Similarity=0.477  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHhcCeEEeec
Q 010899          445 AMMLVFLHRLITTYKWEMID  464 (498)
Q Consensus       445 ~~~~~~l~~ll~~f~~~~~~  464 (498)
                      .-|+-++.++|+-|||.+.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            35788999999999999876


No 45 
>PF14851 FAM176:  FAM176 family
Probab=36.08  E-value=61  Score=26.05  Aligned_cols=39  Identities=18%  Similarity=0.232  Sum_probs=18.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 010899            4 TLFLYGYIVFVIGIVIILIIMNTKKMLRGRSTVSIPPGS   42 (498)
Q Consensus         4 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~pPgp   42 (498)
                      .+-|+.+..+++++++.+.+...+...+.++..+.++.|
T Consensus        21 ~~aLYFv~gVC~GLlLtLcllV~risc~~r~~~r~~~~~   59 (153)
T PF14851_consen   21 RFALYFVSGVCAGLLLTLCLLVIRISCRPRKRCRELPSP   59 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhheeeccccccccCCc
Confidence            344555555555555555555444444333334344444


No 46 
>PHA03049 IMV membrane protein; Provisional
Probab=34.95  E-value=1.3e+02  Score=20.01  Aligned_cols=22  Identities=18%  Similarity=0.285  Sum_probs=10.8

Q ss_pred             HhcCCCCCCCCCCCCCCccccc
Q 010899           29 MLRGRSTVSIPPGSEGLPLIGE   50 (498)
Q Consensus        29 ~~~~~~~~~~pPgp~~~P~~G~   50 (498)
                      +.+.+.....||.|...+-.-+
T Consensus        23 Ynkk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049         23 YNKKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             HhcccccCCCCCChhhccCchh
Confidence            3444555555665544444433


No 47 
>PHA02902 putative IMV membrane protein; Provisional
Probab=34.49  E-value=1.4e+02  Score=19.69  Aligned_cols=11  Identities=27%  Similarity=0.359  Sum_probs=4.5

Q ss_pred             HHHHHHHHHHH
Q 010899           19 IILIIMNTKKM   29 (498)
Q Consensus        19 ~~~~~~~~~~~   29 (498)
                      .++++..++++
T Consensus        17 clliya~YrR~   27 (70)
T PHA02902         17 CLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHh
Confidence            33334444444


No 48 
>PRK06789 flagellar motor switch protein; Validated
Probab=33.38  E-value=41  Score=23.17  Aligned_cols=38  Identities=11%  Similarity=0.136  Sum_probs=30.1

Q ss_pred             HHhhhcCCCCCCc-CcceeccCc--cccCeEecCCcEEeec
Q 010899          358 VKESLRMASIVAW-YPRLVIHDC--EIEGYVIKAGWSVNID  395 (498)
Q Consensus       358 i~EtlRl~p~~~~-~~R~~~~d~--~i~g~~ip~G~~v~~~  395 (498)
                      ++|.|.|.+-... +-|.+.+++  .++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            8899999886554 667776654  4699999999999876


No 49 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=33.25  E-value=20  Score=22.58  Aligned_cols=11  Identities=36%  Similarity=0.773  Sum_probs=8.9

Q ss_pred             ccCCCCccCcc
Q 010899          428 IPFSMGGRACL  438 (498)
Q Consensus       428 ~~Fg~G~r~C~  438 (498)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999998884


No 50 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=32.31  E-value=31  Score=29.32  Aligned_cols=21  Identities=19%  Similarity=0.158  Sum_probs=18.2

Q ss_pred             cccccCCCCCCCCCCCCCCCC
Q 010899          396 AKSIHLDSTVHSNPYKFNPSR  416 (498)
Q Consensus       396 ~~~~~~d~~~~~~p~~F~PeR  416 (498)
                      .+.-|.|+..|.|...|+|-|
T Consensus       191 W~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  191 WWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCcccccCccccCCCC
Confidence            344599999999999999998


No 51 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=32.19  E-value=1.6e+02  Score=28.65  Aligned_cols=38  Identities=11%  Similarity=0.100  Sum_probs=19.6

Q ss_pred             HhcCCeEEeccCCcceEEEcCHHHHHHHHhhcCCcccc
Q 010899           73 LKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTK  110 (498)
Q Consensus        73 ~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~  110 (498)
                      -+||.|+.-.+-++.+-|=.=|..-++-+.++.+.|+.
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            37888888666555554433333333333344344443


No 52 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=30.18  E-value=49  Score=21.02  Aligned_cols=19  Identities=16%  Similarity=0.076  Sum_probs=16.1

Q ss_pred             hcCCeEEeccCCcceEEEc
Q 010899           74 KYGDCFRTNIFATTNVFFS   92 (498)
Q Consensus        74 kyG~v~~~~~~~~~~vvv~   92 (498)
                      +-|+|++++-||+.++|..
T Consensus         2 ~~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    2 KIGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCCEEEEccCCCCeEEEE
Confidence            3489999999999998873


No 53 
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=28.85  E-value=32  Score=33.25  Aligned_cols=46  Identities=22%  Similarity=0.245  Sum_probs=27.3

Q ss_pred             hhhcCCCCCCcCcceeccCccccCeEecCCcEEeeccccccCCCCCCCCCCCC-CCCCCCCCC
Q 010899          360 ESLRMASIVAWYPRLVIHDCEIEGYVIKAGWSVNIDAKSIHLDSTVHSNPYKF-NPSRFDGDE  421 (498)
Q Consensus       360 EtlRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F-~PeR~l~~~  421 (498)
                      |.-||..-.|  ||.+.+.+.+....-..|+              -=|-|-+| ++++|++++
T Consensus       220 ~~gRLKTGTP--pRlak~sInfS~le~q~gD--------------~~p~pfSFln~~v~i~~e  266 (679)
T KOG2311|consen  220 ELGRLKTGTP--PRLAKESINFSKLERQIGD--------------EPPIPFSFLNETVWIEPE  266 (679)
T ss_pred             eeccccCCCC--cccccccCChHHhhhhcCC--------------CCCCceeccCCccccChh
Confidence            6667765444  6777776665544333332              22556777 778887653


No 54 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=28.76  E-value=81  Score=18.41  Aligned_cols=20  Identities=10%  Similarity=0.379  Sum_probs=13.1

Q ss_pred             HHHHHHHHh-hCHHHHHHHHH
Q 010899          310 ITWMVKYLS-ENEEVLDKLKA  329 (498)
Q Consensus       310 l~~~l~~L~-~~P~~~~kl~~  329 (498)
                      +..++..++ +|||+++.+++
T Consensus        15 L~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   15 LQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHhChhHHHHHHh
Confidence            334444555 79999888764


No 55 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=28.19  E-value=75  Score=19.00  Aligned_cols=18  Identities=11%  Similarity=0.030  Sum_probs=14.7

Q ss_pred             HHHHHHHhhCHHHHHHHH
Q 010899          311 TWMVKYLSENEEVLDKLK  328 (498)
Q Consensus       311 ~~~l~~L~~~P~~~~kl~  328 (498)
                      .|-++.++++||+|+-+.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            466788899999998775


No 56 
>PF03597 CcoS:  Cytochrome oxidase maturation protein cbb3-type;  InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase. 
Probab=27.05  E-value=1.2e+02  Score=18.58  Aligned_cols=18  Identities=11%  Similarity=0.080  Sum_probs=6.9

Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 010899            6 FLYGYIVFVIGIVIILII   23 (498)
Q Consensus         6 ~l~~~~~~~l~~~~~~~~   23 (498)
                      .++...+++.++.+.+++
T Consensus         5 ~lip~sl~l~~~~l~~f~   22 (45)
T PF03597_consen    5 ILIPVSLILGLIALAAFL   22 (45)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            333344443333333333


No 57 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.98  E-value=1.6e+02  Score=18.47  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=22.3

Q ss_pred             HHHHhcCCeEEeccCCc----ceEEEcCHHHHHHHHh
Q 010899           70 VRHLKYGDCFRTNIFAT----TNVFFSSTGAAKIILN  102 (498)
Q Consensus        70 ~~~~kyG~v~~~~~~~~----~~vvv~~~~~v~~il~  102 (498)
                      +.-.+||+|-.+.+...    -.|-..+.+.++.+..
T Consensus         3 ~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    3 KLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             HHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            45569999988876442    3555678888887774


No 58 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=25.78  E-value=87  Score=25.29  Aligned_cols=38  Identities=11%  Similarity=0.173  Sum_probs=29.0

Q ss_pred             CcchHHHHHHHHHhcC-CeEEeccCCc----ceEEEcCHHHHH
Q 010899           61 SQGFYQFIQVRHLKYG-DCFRTNIFAT----TNVFFSSTGAAK   98 (498)
Q Consensus        61 ~~~~~~~~~~~~~kyG-~v~~~~~~~~----~~vvv~~~~~v~   98 (498)
                      +....+..+++++++| ||..++++|.    --++++||-.+-
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            5557788899999999 9999998772    346788875543


No 59 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.15  E-value=1.6e+02  Score=22.80  Aligned_cols=40  Identities=13%  Similarity=-0.003  Sum_probs=30.7

Q ss_pred             chHHHHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhhc
Q 010899           63 GFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE  104 (498)
Q Consensus        63 ~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~~  104 (498)
                      +....+++|.++||.+--.  .+...+...|++..+++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            3456788999999987553  246778899999999998654


No 60 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=24.76  E-value=49  Score=21.59  Aligned_cols=7  Identities=29%  Similarity=0.605  Sum_probs=5.4

Q ss_pred             CCCCCCC
Q 010899          413 NPSRFDG  419 (498)
Q Consensus       413 ~PeR~l~  419 (498)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            6888876


No 61 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=24.60  E-value=21  Score=29.02  Aligned_cols=32  Identities=28%  Similarity=0.566  Sum_probs=24.8

Q ss_pred             CCCCCCCCCC----CCCCCCccccCCCCccCcccHH
Q 010899          410 YKFNPSRFDG----DESKPYGSIPFSMGGRACLGMH  441 (498)
Q Consensus       410 ~~F~PeR~l~----~~~~~~~~~~Fg~G~r~C~G~~  441 (498)
                      .+|+|++|=.    -+.+....+-|..|+=.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            4799999932    2445667889999999999954


No 62 
>PHA03162 hypothetical protein; Provisional
Probab=24.11  E-value=45  Score=25.60  Aligned_cols=24  Identities=13%  Similarity=0.221  Sum_probs=20.2

Q ss_pred             CCCccCcccHHHHHHHHHHHHHHH
Q 010899          431 SMGGRACLGMHMAKAMMLVFLHRL  454 (498)
Q Consensus       431 g~G~r~C~G~~~a~~~~~~~l~~l  454 (498)
                      ++|.+.|||+...+-++..=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999998888777665


No 63 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=23.98  E-value=68  Score=25.01  Aligned_cols=24  Identities=29%  Similarity=0.575  Sum_probs=17.3

Q ss_pred             cCcccHHHHHHHHHHHHHHHHhcC
Q 010899          435 RACLGMHMAKAMMLVFLHRLITTY  458 (498)
Q Consensus       435 r~C~G~~~a~~~~~~~l~~ll~~f  458 (498)
                      -.|.|+.||...+-.++.+|+..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            489999999999999999998764


No 64 
>PRK02302 hypothetical protein; Provisional
Probab=23.82  E-value=2.3e+02  Score=20.42  Aligned_cols=36  Identities=17%  Similarity=0.145  Sum_probs=25.1

Q ss_pred             HHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhh
Q 010899           67 FIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNN  103 (498)
Q Consensus        67 ~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~  103 (498)
                      ..+.++ +||+|+.+.==..-.++-.|-+.+.++..+
T Consensus        19 ~~r~Lr-kfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         19 DARKLS-KYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             hHHHHh-hcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            344455 999999885434566777788888887754


No 65 
>PRK02886 hypothetical protein; Provisional
Probab=21.25  E-value=2.8e+02  Score=19.85  Aligned_cols=36  Identities=14%  Similarity=0.195  Sum_probs=24.9

Q ss_pred             HHHHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhh
Q 010899           67 FIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNN  103 (498)
Q Consensus        67 ~~~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~  103 (498)
                      ....++ +||+|+.+.==..-.|+-.|-+.+.++..+
T Consensus        17 ~~r~Lr-kyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         17 QAKQLR-KFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             hHHHHh-hcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            344455 999999885434566677788888887754


No 66 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.20  E-value=2.8e+02  Score=19.82  Aligned_cols=34  Identities=15%  Similarity=0.243  Sum_probs=24.6

Q ss_pred             HHHHHhcCCeEEeccCCcceEEEcCHHHHHHHHhh
Q 010899           69 QVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNN  103 (498)
Q Consensus        69 ~~~~~kyG~v~~~~~~~~~~vvv~~~~~v~~il~~  103 (498)
                      +.++ +||+|+...-=.+-.+.-.+-+.+.+++.+
T Consensus        20 RqLr-kfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          20 RQLR-KFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             HHHH-hcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            3444 999999885444556667888889888855


Done!